SEQF8859.1|JHWD01000045.1	CCTyper	repeat_region	9261	9533	273	+	.	ID=SEQF8859.1|JHWD01000045.1_1;Genome_ID=SEQF8859.1;Note=Predictor:CCtyper;Start:9261;End:9533;Consensus_Repeat:GTGTTCCCCGCGAGCGCGGGGATGAACCG;Number_of_Repeats:5;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:100.0;Spacer_Identity:46.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	direct_repeat	9261	9289	29	+	.	ID=SEQF8859.1|JHWD01000045.1_1_REPEAT1;Parent=SEQF8859.1|JHWD01000045.1_1;Note=GTGTTCCCCGCGAGCGCGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	binding_site	9290	9321	32	+	.	ID=SEQF8859.1|JHWD01000045.1_1_SPACER1;Parent=SEQF8859.1|JHWD01000045.1_1;Note=ACCCGCGTGGATGCCGCCGAGGTGATCCACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	direct_repeat	9322	9350	29	+	.	ID=SEQF8859.1|JHWD01000045.1_1_REPEAT2;Parent=SEQF8859.1|JHWD01000045.1_1;Note=GTGTTCCCCGCGAGCGCGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	binding_site	9351	9382	32	+	.	ID=SEQF8859.1|JHWD01000045.1_1_SPACER2;Parent=SEQF8859.1|JHWD01000045.1_1;Note=CTCATCAGCTCGGCCTCGAAATCGGCGCGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	direct_repeat	9383	9411	29	+	.	ID=SEQF8859.1|JHWD01000045.1_1_REPEAT3;Parent=SEQF8859.1|JHWD01000045.1_1;Note=GTGTTCCCCGCGAGCGCGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	binding_site	9412	9443	32	+	.	ID=SEQF8859.1|JHWD01000045.1_1_SPACER3;Parent=SEQF8859.1|JHWD01000045.1_1;Note=TGCTCCCCCGTGCTCTCGAATTCGGCCACGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	direct_repeat	9444	9472	29	+	.	ID=SEQF8859.1|JHWD01000045.1_1_REPEAT4;Parent=SEQF8859.1|JHWD01000045.1_1;Note=GTGTTCCCCGCGAGCGCGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	binding_site	9473	9504	32	+	.	ID=SEQF8859.1|JHWD01000045.1_1_SPACER4;Parent=SEQF8859.1|JHWD01000045.1_1;Note=ACAGCCGAGCTACGCAAGCACGACAGGGATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	direct_repeat	9505	9533	29	+	.	ID=SEQF8859.1|JHWD01000045.1_1_REPEAT5;Parent=SEQF8859.1|JHWD01000045.1_1;Note=GTGTTCCCCGCGAGCGCGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8859.1|JHWD01000045.1	CCTyper	OPERON	750	9211	8462	+	.	ID=SEQF8859.1|JHWD01000045.1@1;Genome_ID=SEQF8859.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas3_0_CAS-I,Cas8e_1_CAS-I-E,Cse2gr11_1_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_CAS-I-E,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_1_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5,6,7,8,9;E-values=3.70e-64,9.60e-100,7.90e-21,3.10e-98,2.00e-43,4.80e-51,1.50e-106,8.20e-36;CoverageSeq=0.522,0.87,0.717,0.944,0.688,0.965,0.851,0.82;CoverageHMM=0.98,1.0,0.993,0.93,0.956,1.0,0.989,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF8859.1|KK211415.1	CCTyper	OPERON	335	2814	2480	+	.	ID=SEQF8859.1|KK211415.1@1;Genome_ID=SEQF8859.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=25%;Complete_Adaptation=100%;Best_type=I-C;Best_score=11.0;Genes=Cas7_1_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_2_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5;E-values=2.10e-47,5.50e-38,1.30e-144,8.80e-27;CoverageSeq=0.975,0.837,0.986,0.856;CoverageHMM=0.5,1.0,0.997,0.987;Strand_Interference=1;Strand_Adaptation=1
SEQF8859.1|JHWD01000012.1	CCTyper	OPERON	4250	12075	7826	-	.	ID=SEQF8859.1|JHWD01000012.1@1;Genome_ID=SEQF8859.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=I-C;Best_score=12.0;Genes=AbiEii_0_CAS-III,Cas7b_0_CAS-I-B-I-C,Cas8c_3_CAS-I-C,Cas5_1_CAS-I-C,Cas3_1_CAS-I;Positions=5,8,9,10,11;E-values=5.00e-05,3.00e-50,3.60e-157,3.40e-83,7.40e-48;CoverageSeq=0.303,0.908,0.948,0.917,0.464;CoverageHMM=0.408,0.476,0.995,0.995,0.478;Strand_Interference=-1;Strand_Adaptation=NA
SEQF8859.1|JHWD01000012.1	CCTyper	CDS	4250	5386	379	-	.	ID=SEQF8859.1|JHWD01000012.1_5_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=5e-05;Score=21.0;Coverage_Seq=0.3034300791556728;Coverage_Hmm=0.4084507042253521
SEQF8859.1|KK211415.1	CCTyper	CDS	1474	2514	347	+	.	ID=SEQF8859.1|KK211415.1_4_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=1.3e-144;Score=479.5;Coverage_Seq=0.9855907780979827;Coverage_Hmm=0.9970588235294118
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	7930	8898	323	+	.	ID=SEQF8859.1|JHWD01000045.1_8_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=1.5e-106;Score=353.5;Coverage_Seq=0.8513931888544891;Coverage_Hmm=0.9888475836431226
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	8879	9211	111	+	.	ID=SEQF8859.1|JHWD01000045.1_9_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.2e-36;Score=120.1;Coverage_Seq=0.8198198198198198;Coverage_Hmm=1.0
SEQF8859.1|KK211415.1	CCTyper	CDS	2524	2814	97	+	.	ID=SEQF8859.1|KK211415.1_5_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.800000000000001e-27;Score=91.2;Coverage_Seq=0.8556701030927835;Coverage_Hmm=0.9873417721518988
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	750	3146	799	+	.	ID=SEQF8859.1|JHWD01000045.1_2_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=3.7e-64;Score=215.0;Coverage_Seq=0.5219023779724656;Coverage_Hmm=0.9801699716713881
SEQF8859.1|JHWD01000012.1	CCTyper	CDS	9820	12075	752	-	.	ID=SEQF8859.1|JHWD01000012.1_11_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=7.400000000000001e-48;Score=161.4;Coverage_Seq=0.4640957446808511;Coverage_Hmm=0.4778523489932886
SEQF8859.1|KK211415.1	CCTyper	CDS	825	1469	215	+	.	ID=SEQF8859.1|KK211415.1_3_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=5.5e-38;Score=128.6;Coverage_Seq=0.8372093023255814;Coverage_Hmm=1.0
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	6477	7244	256	+	.	ID=SEQF8859.1|JHWD01000045.1_6_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=2e-43;Score=146.3;Coverage_Seq=0.6875;Coverage_Hmm=0.9560439560439561
SEQF8859.1|JHWD01000012.1	CCTyper	CDS	8946	9635	230	-	.	ID=SEQF8859.1|JHWD01000012.1_10_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-C;coding_strand=-;E-value=3.4e-83;Score=276.4;Coverage_Seq=0.9173913043478261;Coverage_Hmm=0.9949494949494949
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	7241	7930	230	+	.	ID=SEQF8859.1|JHWD01000045.1_7_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.8e-51;Score=171.9;Coverage_Seq=0.9652173913043478;Coverage_Hmm=1.0
SEQF8859.1|KK211415.1	CCTyper	CDS	335	814	160	+	.	ID=SEQF8859.1|KK211415.1_2_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-C;coding_strand=+;E-value=2.0999999999999998e-47;Score=159.8;Coverage_Seq=0.975;Coverage_Hmm=0.5
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	5393	6472	360	+	.	ID=SEQF8859.1|JHWD01000045.1_5_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=3.1e-98;Score=327.5;Coverage_Seq=0.9444444444444444;Coverage_Hmm=0.9303621169916435
SEQF8859.1|JHWD01000012.1	CCTyper	CDS	6711	7166	152	-	.	ID=SEQF8859.1|JHWD01000012.1_8_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas7b_0_CAS-I-B-I-C;coding_strand=-;E-value=3e-50;Score=169.1;Coverage_Seq=0.9078947368421053;Coverage_Hmm=0.4763779527559055
SEQF8859.1|JHWD01000012.1	CCTyper	CDS	7159	8949	597	-	.	ID=SEQF8859.1|JHWD01000012.1_9_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_3_CAS-I-C;coding_strand=-;E-value=3.6e-157;Score=522.2;Coverage_Seq=0.948073701842546;Coverage_Hmm=0.9946332737030411
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	3205	4839	545	+	.	ID=SEQF8859.1|JHWD01000045.1_3_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=+;E-value=9.6e-100;Score=332.8;Coverage_Seq=0.8697247706422019;Coverage_Hmm=1.0
SEQF8859.1|JHWD01000045.1	CCTyper	CDS	4836	5396	187	+	.	ID=SEQF8859.1|JHWD01000045.1_4_cas;Genome_ID=SEQF8859.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_1_CAS-I-E;coding_strand=+;E-value=7.9e-21;Score=72.8;Coverage_Seq=0.7165775401069518;Coverage_Hmm=0.993006993006993