SEQF8984.1|CP025029.1	CCTyper	repeat_region	509612	510304	693	+	.	ID=SEQF8984.1|CP025029.1_1;Genome_ID=SEQF8984.1;Note=Predictor:CCtyper;Start:509612;End:510304;Consensus_Repeat:GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Number_of_Repeats:11;Repeat_Length:32;Average_Spacer_Length:34.1;Repeat_Identity:92.8;Spacer_Identity:41.9;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.945;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509612	509643	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT1;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509644	509678	35	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER1;Parent=SEQF8984.1|CP025029.1_1;Note=AGAAGATTATTACGTTGAGTCCAAGCCTGACGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509679	509710	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT2;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509711	509744	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER2;Parent=SEQF8984.1|CP025029.1_1;Note=TAACTTTGTTAAGTAGCTTTGTTTGGTTTCTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509745	509776	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT3;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509777	509810	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER3;Parent=SEQF8984.1|CP025029.1_1;Note=TAAGTCTCGCTGTTACGCTTGACGCAGAGCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509811	509842	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT4;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509843	509876	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER4;Parent=SEQF8984.1|CP025029.1_1;Note=TATTTTATATTAAAAATAAGACTACCATAATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509877	509908	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT5;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509909	509942	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER5;Parent=SEQF8984.1|CP025029.1_1;Note=AGGCAAAAGTCAACGAGCTACTCAAACAGCCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	509943	509974	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT6;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	509975	510009	35	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER6;Parent=SEQF8984.1|CP025029.1_1;Note=AGGTGGTATGTTTAAAATTTTTGCATCTTCAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	510010	510041	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT7;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	510042	510075	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER7;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGTAAAGACGTAGCATATCACTAATTAGATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	510076	510107	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT8;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	510108	510142	35	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER8;Parent=SEQF8984.1|CP025029.1_1;Note=TAGCTGATAGCCTGCAATATACAACCATCCGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	510143	510174	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT9;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	510175	510208	34	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER9;Parent=SEQF8984.1|CP025029.1_1;Note=ATCATATCTCTATAATTTCCTTTCATATCAACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	510209	510240	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT10;Parent=SEQF8984.1|CP025029.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	510241	510272	32	+	.	ID=SEQF8984.1|CP025029.1_1_SPACER10;Parent=SEQF8984.1|CP025029.1_1;Note=TAATAATGATTATTTTTTTATTAATTCATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	510273	510304	32	+	.	ID=SEQF8984.1|CP025029.1_1_REPEAT11;Parent=SEQF8984.1|CP025029.1_1;Note=CATCGCCCCTTTGCGGGTGTGTAGTTTCAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	repeat_region	911831	912460	630	+	.	ID=SEQF8984.1|CP025029.1_2;Genome_ID=SEQF8984.1;Note=Predictor:CCtyper;Start:911831;End:912460;Consensus_Repeat:GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:92.7;Spacer_Identity:42.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.798;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	911831	911866	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT1;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	911867	911896	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER1;Parent=SEQF8984.1|CP025029.1_2;Note=TTCTTGACCACTAGCATCACCTACCAATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	911897	911932	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT2;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	911933	911962	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER2;Parent=SEQF8984.1|CP025029.1_2;Note=CTTAATAGTAGATGATGTCTGTGCTCAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	911963	911998	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT3;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	911999	912028	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER3;Parent=SEQF8984.1|CP025029.1_2;Note=CAATTATAACAACAATAAAGTATGTAATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912029	912064	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT4;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912065	912094	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER4;Parent=SEQF8984.1|CP025029.1_2;Note=GCGCTTCTGAGTGTTGATTCATACTCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912095	912130	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT5;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912131	912160	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER5;Parent=SEQF8984.1|CP025029.1_2;Note=CTAATCACGTTCGATTCGTGATGGGTCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912161	912196	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT6;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912197	912226	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER6;Parent=SEQF8984.1|CP025029.1_2;Note=GTCAAAAGAAAAAGATTAGTCATCACACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912227	912262	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT7;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912263	912292	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER7;Parent=SEQF8984.1|CP025029.1_2;Note=ACCGTCGATGTTGGTTCTTTGTGTTGGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912293	912328	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT8;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912329	912358	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER8;Parent=SEQF8984.1|CP025029.1_2;Note=AATATTACATTGATAATGTAGTAGAATTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912359	912394	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT9;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	binding_site	912395	912424	30	+	.	ID=SEQF8984.1|CP025029.1_2_SPACER9;Parent=SEQF8984.1|CP025029.1_2;Note=AAATTCTTTGCTTGATTAATTAATTCGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	direct_repeat	912425	912460	36	+	.	ID=SEQF8984.1|CP025029.1_2_REPEAT10;Parent=SEQF8984.1|CP025029.1_2;Note=GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8984.1|CP025029.1	CCTyper	OPERON	905757	911730	5974	+	.	ID=SEQF8984.1|CP025029.1@22;Genome_ID=SEQF8984.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=878,879,880,881;E-values=0.00e+00,5.90e-108,1.60e-52,2.60e-107;CoverageSeq=0.995,0.928,0.982,0.977;CoverageHMM=0.998,0.996,0.991,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF8984.1|CP025029.1	CCTyper	OPERON	501413	509465	8053	+	.	ID=SEQF8984.1|CP025029.1@14;Genome_ID=SEQF8984.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI;Positions=500,501,502,503,504,505,506;E-values=3.80e-147,5.00e-98,6.60e-170,2.10e-145,1.60e-31,1.40e-136,3.30e-30;CoverageSeq=0.919,0.831,0.979,0.993,0.844,0.988,0.929;CoverageHMM=0.995,1.0,0.998,0.989,0.983,0.997,0.978;Strand_Interference=1;Strand_Adaptation=1
SEQF8984.1|CP025029.1	CCTyper	CDS	508136	509161	342	+	.	ID=SEQF8984.1|CP025029.1_505_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=1.4e-136;Score=452.0;Coverage_Seq=0.9883040935672515;Coverage_Hmm=0.9970588235294118
SEQF8984.1|CP025029.1	CCTyper	CDS	909871	910740	290	+	.	ID=SEQF8984.1|CP025029.1_879_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.9000000000000004e-108;Score=357.1;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF8984.1|CP025029.1	CCTyper	CDS	509172	509465	98	+	.	ID=SEQF8984.1|CP025029.1_506_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.3e-30;Score=101.2;Coverage_Seq=0.9285714285714286;Coverage_Hmm=0.9775280898876404
SEQF8984.1|CP025029.1	CCTyper	CDS	910737	911078	114	+	.	ID=SEQF8984.1|CP025029.1_880_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-52;Score=173.6;Coverage_Seq=0.9824561403508771;Coverage_Hmm=0.9913793103448276
SEQF8984.1|CP025029.1	CCTyper	CDS	501413	503857	815	+	.	ID=SEQF8984.1|CP025029.1_500_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=3.7999999999999997e-147;Score=488.5;Coverage_Seq=0.9190184049079755;Coverage_Hmm=0.9946308724832215
SEQF8984.1|CP025029.1	CCTyper	CDS	507468	508139	224	+	.	ID=SEQF8984.1|CP025029.1_504_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=1.5999999999999999e-31;Score=106.4;Coverage_Seq=0.84375;Coverage_Hmm=0.9833333333333333
SEQF8984.1|CP025029.1	CCTyper	CDS	503990	504718	243	+	.	ID=SEQF8984.1|CP025029.1_501_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=5e-98;Score=324.0;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF8984.1|CP025029.1	CCTyper	CDS	506618	507466	283	+	.	ID=SEQF8984.1|CP025029.1_503_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=2.1000000000000003e-145;Score=480.2;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF8984.1|CP025029.1	CCTyper	CDS	504718	506613	632	+	.	ID=SEQF8984.1|CP025029.1_502_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=6.6e-170;Score=563.3;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF8984.1|CP025029.1	CCTyper	CDS	905757	909869	1371	+	.	ID=SEQF8984.1|CP025029.1_878_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1241.8;Coverage_Seq=0.9948942377826404;Coverage_Hmm=0.9982142857142857
SEQF8984.1|CP025029.1	CCTyper	CDS	911065	911730	222	+	.	ID=SEQF8984.1|CP025029.1_881_cas;Genome_ID=SEQF8984.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.5999999999999998e-107;Score=354.3;Coverage_Seq=0.9774774774774775;Coverage_Hmm=0.9954128440366973