SEQF8997.1|HF952105.1	CCTyper	repeat_region	475530	475895	366	+	.	ID=SEQF8997.1|HF952105.1_1;Genome_ID=SEQF8997.1;Note=Predictor:CCtyper;Start:475530;End:475895;Consensus_Repeat:GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Number_of_Repeats:6;Repeat_Length:32;Average_Spacer_Length:34.8;Repeat_Identity:91.0;Spacer_Identity:42.4;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.945;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475530	475561	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT1;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	475562	475595	34	+	.	ID=SEQF8997.1|HF952105.1_1_SPACER1;Parent=SEQF8997.1|HF952105.1_1;Note=TATACAAACTTCTGCGTTATCTTCGTCATAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475596	475627	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT2;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	475628	475661	34	+	.	ID=SEQF8997.1|HF952105.1_1_SPACER2;Parent=SEQF8997.1|HF952105.1_1;Note=AAGTGGGTTAGTACAACTGAATGGGATGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475662	475693	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT3;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	475694	475729	36	+	.	ID=SEQF8997.1|HF952105.1_1_SPACER3;Parent=SEQF8997.1|HF952105.1_1;Note=CTAAAGGTGTCTTATGGGATTCGAACCCATAGTGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475730	475761	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT4;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	475762	475796	35	+	.	ID=SEQF8997.1|HF952105.1_1_SPACER4;Parent=SEQF8997.1|HF952105.1_1;Note=ATGCATTGATGTAACTTTCTATATTATTGACAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475797	475828	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT5;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	475829	475863	35	+	.	ID=SEQF8997.1|HF952105.1_1_SPACER5;Parent=SEQF8997.1|HF952105.1_1;Note=TCCCAGTCCAATGTTTTATTAGCCATCTCAGCCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	475864	475895	32	+	.	ID=SEQF8997.1|HF952105.1_1_REPEAT6;Parent=SEQF8997.1|HF952105.1_1;Note=GTCGCACCCTTTGCGGGTGTGTAGTTTCAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	repeat_region	933638	933871	234	+	.	ID=SEQF8997.1|HF952105.1_2;Genome_ID=SEQF8997.1;Note=Predictor:CCtyper;Start:933638;End:933871;Consensus_Repeat:GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:94.7;Spacer_Identity:41.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.798;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	933638	933673	36	+	.	ID=SEQF8997.1|HF952105.1_2_REPEAT1;Parent=SEQF8997.1|HF952105.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	933674	933703	30	+	.	ID=SEQF8997.1|HF952105.1_2_SPACER1;Parent=SEQF8997.1|HF952105.1_2;Note=CTAGTCAAATCTTGCAAGAGATTAGTGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	933704	933739	36	+	.	ID=SEQF8997.1|HF952105.1_2_REPEAT2;Parent=SEQF8997.1|HF952105.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	933740	933769	30	+	.	ID=SEQF8997.1|HF952105.1_2_SPACER2;Parent=SEQF8997.1|HF952105.1_2;Note=GGTCTTTTAGTTTTTTGATGTCATCAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	933770	933805	36	+	.	ID=SEQF8997.1|HF952105.1_2_REPEAT3;Parent=SEQF8997.1|HF952105.1_2;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	binding_site	933806	933835	30	+	.	ID=SEQF8997.1|HF952105.1_2_SPACER3;Parent=SEQF8997.1|HF952105.1_2;Note=TAAGAAGTATAAAGAGCTTCTACGCACCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	direct_repeat	933836	933871	36	+	.	ID=SEQF8997.1|HF952105.1_2_REPEAT4;Parent=SEQF8997.1|HF952105.1_2;Note=GTTTTAGAGCTGCGCTGTTTCGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8997.1|HF952105.1	CCTyper	OPERON	467487	475383	7897	+	.	ID=SEQF8997.1|HF952105.1@12;Genome_ID=SEQF8997.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI;Positions=436,437,438,439,440,441,442;E-values=1.20e-144,2.60e-98,5.40e-170,3.70e-144,1.70e-31,1.50e-136,3.40e-30;CoverageSeq=0.983,0.831,0.979,0.993,0.844,0.988,0.929;CoverageHMM=0.995,1.0,0.998,0.989,0.983,0.997,0.978;Strand_Interference=1;Strand_Adaptation=1
SEQF8997.1|HF952105.1	CCTyper	OPERON	927564	933537	5974	+	.	ID=SEQF8997.1|HF952105.1@23;Genome_ID=SEQF8997.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=927,928,929,930;E-values=0.00e+00,6.20e-105,5.50e-52,9.60e-107;CoverageSeq=0.811,0.928,0.982,0.977;CoverageHMM=1.0,0.996,0.991,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF8997.1|HF952105.1	CCTyper	CDS	474054	475079	342	+	.	ID=SEQF8997.1|HF952105.1_441_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=1.5e-136;Score=452.0;Coverage_Seq=0.9883040935672515;Coverage_Hmm=0.9970588235294118
SEQF8997.1|HF952105.1	CCTyper	CDS	931678	932547	290	+	.	ID=SEQF8997.1|HF952105.1_928_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.1999999999999995e-105;Score=347.2;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF8997.1|HF952105.1	CCTyper	CDS	475090	475383	98	+	.	ID=SEQF8997.1|HF952105.1_442_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.4e-30;Score=101.2;Coverage_Seq=0.9285714285714286;Coverage_Hmm=0.9775280898876404
SEQF8997.1|HF952105.1	CCTyper	CDS	932544	932885	114	+	.	ID=SEQF8997.1|HF952105.1_929_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.5e-52;Score=171.9;Coverage_Seq=0.9824561403508771;Coverage_Hmm=0.9913793103448276
SEQF8997.1|HF952105.1	CCTyper	CDS	467487	469772	762	+	.	ID=SEQF8997.1|HF952105.1_436_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=1.2e-144;Score=480.3;Coverage_Seq=0.9829396325459318;Coverage_Hmm=0.9946308724832215
SEQF8997.1|HF952105.1	CCTyper	CDS	473386	474057	224	+	.	ID=SEQF8997.1|HF952105.1_440_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=1.6999999999999998e-31;Score=106.4;Coverage_Seq=0.84375;Coverage_Hmm=0.9833333333333333
SEQF8997.1|HF952105.1	CCTyper	CDS	469905	470633	243	+	.	ID=SEQF8997.1|HF952105.1_437_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=2.6e-98;Score=325.0;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF8997.1|HF952105.1	CCTyper	CDS	472536	473384	283	+	.	ID=SEQF8997.1|HF952105.1_439_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=3.7e-144;Score=476.2;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF8997.1|HF952105.1	CCTyper	CDS	470633	472531	633	+	.	ID=SEQF8997.1|HF952105.1_438_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=5.4000000000000005e-170;Score=563.6;Coverage_Seq=0.9794628751974723;Coverage_Hmm=0.9982993197278912
SEQF8997.1|HF952105.1	CCTyper	CDS	927564	931430	1289	+	.	ID=SEQF8997.1|HF952105.1_927_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=0.0;Score=1164.4;Coverage_Seq=0.8107059736229635;Coverage_Hmm=1.0
SEQF8997.1|HF952105.1	CCTyper	CDS	932872	933537	222	+	.	ID=SEQF8997.1|HF952105.1_930_cas;Genome_ID=SEQF8997.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=9.6e-107;Score=352.5;Coverage_Seq=0.9774774774774775;Coverage_Hmm=0.9954128440366973