SEQF9003.1|CP007572.1	CCTyper	repeat_region	998542	998766	225	+	.	ID=SEQF9003.1|CP007572.1_1;Genome_ID=SEQF9003.1;Note=Predictor:CCtyper;Start:998542;End:998766;Consensus_Repeat:GGTTTTAGAGCTGTGCTGTTTCGAATG;Number_of_Repeats:4;Repeat_Length:27;Average_Spacer_Length:39;Repeat_Identity:81.1;Spacer_Identity:53.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.898;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	direct_repeat	998542	998568	27	+	.	ID=SEQF9003.1|CP007572.1_1_REPEAT1;Parent=SEQF9003.1|CP007572.1_1;Note=GGTTTTAGAGCTGTGCTGTTTCGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	binding_site	998569	998607	39	+	.	ID=SEQF9003.1|CP007572.1_1_SPACER1;Parent=SEQF9003.1|CP007572.1_1;Note=GTTCCAAAACTGCAATGTTATTTGATGATGGAACAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	direct_repeat	998608	998634	27	+	.	ID=SEQF9003.1|CP007572.1_1_REPEAT2;Parent=SEQF9003.1|CP007572.1_1;Note=GGTTTTAGAGCTGTGCTGTTTCGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	binding_site	998635	998673	39	+	.	ID=SEQF9003.1|CP007572.1_1_SPACER2;Parent=SEQF9003.1|CP007572.1_1;Note=ATTCCAAAACAATACAATAGTCGCACAAACAGCGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	direct_repeat	998674	998700	27	+	.	ID=SEQF9003.1|CP007572.1_1_REPEAT3;Parent=SEQF9003.1|CP007572.1_1;Note=TGTTTTAGAGCTGTGCTGTTTCGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	binding_site	998701	998739	39	+	.	ID=SEQF9003.1|CP007572.1_1_SPACER3;Parent=SEQF9003.1|CP007572.1_1;Note=GTTCCAAAACTTTAATATCGTCTATATAGATTCCTGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	direct_repeat	998740	998766	27	+	.	ID=SEQF9003.1|CP007572.1_1_REPEAT4;Parent=SEQF9003.1|CP007572.1_1;Note=GGTTTTAGAGCTGCGCGGTTATTATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9003.1|CP007572.1	CCTyper	OPERON	1778778	1786714	7937	-	.	ID=SEQF9003.1|CP007572.1@50;Genome_ID=SEQF9003.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type IV-D;Complete_Interference=40%;Complete_Adaptation=NA;Best_type=IV-D;Best_score=6.0;Genes=Cas6_13_CAS-I-II-III-IV-V-VI,RecD_0_IVD,RT_0_CAS-III-AM-III-B;Positions=1715,1718,1721;E-values=6.20e-03,3.30e-79,1.30e-88;CoverageSeq=0.644,0.777,0.667;CoverageHMM=0.338,0.841,0.95;Strand_Interference=0;Strand_Adaptation=NA
SEQF9003.1|CP007572.1	CCTyper	OPERON	992469	998442	5974	+	.	ID=SEQF9003.1|CP007572.1@32;Genome_ID=SEQF9003.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=954,955,956,957;E-values=0.00e+00,6.30e-108,1.70e-52,1.80e-107;CoverageSeq=0.995,0.928,0.982,0.977;CoverageHMM=0.998,0.996,0.991,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF9003.1|CP007572.1	CCTyper	CDS	996583	997452	290	+	.	ID=SEQF9003.1|CP007572.1_955_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.3e-108;Score=357.1;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF9003.1|CP007572.1	CCTyper	CDS	997449	997790	114	+	.	ID=SEQF9003.1|CP007572.1_956_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.7e-52;Score=173.6;Coverage_Seq=0.9824561403508771;Coverage_Hmm=0.9913793103448276
SEQF9003.1|CP007572.1	CCTyper	CDS	1778778	1779089	104	-	.	ID=SEQF9003.1|CP007572.1_1715_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : Cas6_13_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=0.0062;Score=13.8;Coverage_Seq=0.6442307692307693;Coverage_Hmm=0.33774834437086093
SEQF9003.1|CP007572.1	CCTyper	CDS	992469	996581	1371	+	.	ID=SEQF9003.1|CP007572.1_954_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1229.4;Coverage_Seq=0.9948942377826404;Coverage_Hmm=0.9982142857142857
SEQF9003.1|CP007572.1	CCTyper	CDS	997777	998442	222	+	.	ID=SEQF9003.1|CP007572.1_957_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.8e-107;Score=354.9;Coverage_Seq=0.9774774774774775;Coverage_Hmm=0.9954128440366973
SEQF9003.1|CP007572.1	CCTyper	CDS	1785437	1786714	426	-	.	ID=SEQF9003.1|CP007572.1_1721_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : RT_0_CAS-III-AM-III-B;coding_strand=-;E-value=1.3e-88;Score=293.8;Coverage_Seq=0.6666666666666666;Coverage_Hmm=0.9496644295302014
SEQF9003.1|CP007572.1	CCTyper	CDS	1780831	1783251	807	+	.	ID=SEQF9003.1|CP007572.1_1718_cas;Genome_ID=SEQF9003.1;Feature_type=CDS;Product=Cas Prediction : RecD_0_IVD;coding_strand=+;E-value=3.3e-79;Score=263.8;Coverage_Seq=0.7769516728624535;Coverage_Hmm=0.8414154652686763