SEQF9099.1|VDUD01000001.1	CCTyper	repeat_region	3235	4544	1310	+	.	ID=SEQF9099.1|VDUD01000001.1_1;Genome_ID=SEQF9099.1;Note=Predictor:CCtyper;Start:3235;End:4544;Consensus_Repeat:GGAATTACCTCCGCATGCGCGGAGAAGAG;Number_of_Repeats:22;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:98.7;Spacer_Identity:41.7;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.864;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3235	3263	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT1;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3264	3295	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER1;Parent=SEQF9099.1|VDUD01000001.1_1;Note=ACGAATCTGTTGGCTAGCCAATAGGGGTCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3296	3324	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT2;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3325	3356	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER2;Parent=SEQF9099.1|VDUD01000001.1_1;Note=TCGAATCTGGATAGGGCCGATATGCGCACCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3357	3385	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT3;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3386	3417	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER3;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GATGACTACTCATACATGAGCTTGAAGGCCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3418	3446	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT4;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAACTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3447	3478	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER4;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CAGGCCATCAAACCGTCAAGGCTTTGTGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3479	3507	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT5;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3508	3539	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER5;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CCGGCTACACACCCGTGGGGTATGCAACCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3540	3568	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT6;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3569	3600	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER6;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CTTGTTTTAGCGCCATCACGCGAGAAACAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3601	3629	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT7;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3630	3661	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER7;Parent=SEQF9099.1|VDUD01000001.1_1;Note=AGTTTGCTGATCTGCAAACCTATTTTTGCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3662	3690	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT8;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3691	3722	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER8;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGCCAGGTTTCCTTGACTTCCTCACCGACACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3723	3751	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT9;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3752	3783	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER9;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CCTACGCTGATCATCGACATCGTTCCACGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3784	3812	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT10;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3813	3844	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER10;Parent=SEQF9099.1|VDUD01000001.1_1;Note=AACGCCTTAGCCGCGGTAGGGGAGCCGTACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3845	3873	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT11;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3874	3905	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER11;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CGGACAGTGCCTTAGTGGCAAGATCAAAAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3906	3934	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT12;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3935	3966	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER12;Parent=SEQF9099.1|VDUD01000001.1_1;Note=AGCTTTTGATGTTTTGGCGCTGCGATTGGACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	3967	3995	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT13;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	3996	4027	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER13;Parent=SEQF9099.1|VDUD01000001.1_1;Note=TTCAATAGCTTGTGTTTGTTCCAGCATGGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4028	4056	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT14;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4057	4088	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER14;Parent=SEQF9099.1|VDUD01000001.1_1;Note=TGGACCATCGACGACCTTTTCTTTTACGGGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4089	4117	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT15;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4118	4149	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER15;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GAATAACCGCGCGGTACGTGGGAAAAATCGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4150	4178	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT16;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4179	4210	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER16;Parent=SEQF9099.1|VDUD01000001.1_1;Note=ATATGACTACTTCTATCGGAACTACGGGCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4211	4239	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT17;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4240	4271	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER17;Parent=SEQF9099.1|VDUD01000001.1_1;Note=ACCGCGGGGCGGGATAGTTCGGCGAGAGCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4272	4300	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT18;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4301	4332	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER18;Parent=SEQF9099.1|VDUD01000001.1_1;Note=TAATCCCAATAGATACCGCACTTTAGATCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4333	4361	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT19;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4362	4393	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER19;Parent=SEQF9099.1|VDUD01000001.1_1;Note=ATATCGACGCGTGCACCGCGCGCTAATCGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4394	4422	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT20;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4423	4454	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER20;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CACTCGCATTGTTCATAGTTCAACGCGTTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4455	4483	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT21;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	binding_site	4484	4515	32	+	.	ID=SEQF9099.1|VDUD01000001.1_1_SPACER21;Parent=SEQF9099.1|VDUD01000001.1_1;Note=CGGAATTTGTCATATCCGTGCCAGGTCTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	direct_repeat	4516	4544	29	+	.	ID=SEQF9099.1|VDUD01000001.1_1_REPEAT22;Parent=SEQF9099.1|VDUD01000001.1_1;Note=GGAATTACCTCCGCATGCGCGGAGAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9099.1|VDUD01000001.1	CCTyper	OPERON	4566	13492	8927	-	.	ID=SEQF9099.1|VDUD01000001.1@1;Genome_ID=SEQF9099.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=Cas2_10_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas3_0_CAS-I,Cas3HD_0_CAS-I,Cas6e_1_CAS-I-II-III-IV-V-VI,Cas8e_3_CAS-I-E,Cse2gr11_3_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_CAS-I-E;Positions=9,10,11,12,13,15,16,17,18;E-values=2.80e-28,1.30e-68,3.60e-39,1.50e-21,3.40e-29,5.10e-80,1.20e-83,1.20e-81,1.60e-36;CoverageSeq=0.827,0.843,0.588,0.513,0.963,0.965,0.967,0.859,0.761;CoverageHMM=0.988,0.981,0.657,0.961,0.844,0.745,0.976,0.889,0.962;Strand_Interference=0;Strand_Adaptation=-1
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	4878	5813	312	-	.	ID=SEQF9099.1|VDUD01000001.1_10_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=1.3e-68;Score=228.3;Coverage_Seq=0.842948717948718;Coverage_Hmm=0.9814126394052045
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	4566	4877	104	-	.	ID=SEQF9099.1|VDUD01000001.1_9_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.8000000000000002e-28;Score=95.1;Coverage_Seq=0.8269230769230769;Coverage_Hmm=0.9883720930232558
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	7251	8489	413	-	.	ID=SEQF9099.1|VDUD01000001.1_12_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=1.5e-21;Score=74.4;Coverage_Seq=0.513317191283293;Coverage_Hmm=0.9605911330049262
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	5815	7191	459	-	.	ID=SEQF9099.1|VDUD01000001.1_11_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=3.6e-39;Score=132.0;Coverage_Seq=0.5882352941176471;Coverage_Hmm=0.6572237960339944
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	12779	13492	238	+	.	ID=SEQF9099.1|VDUD01000001.1_18_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=1.6e-36;Score=123.0;Coverage_Seq=0.7605042016806722;Coverage_Hmm=0.9615384615384616
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	8486	9055	190	-	.	ID=SEQF9099.1|VDUD01000001.1_13_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.4e-29;Score=99.6;Coverage_Seq=0.9631578947368421;Coverage_Hmm=0.8443396226415094
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	11701	12786	362	+	.	ID=SEQF9099.1|VDUD01000001.1_17_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=1.2e-81;Score=272.2;Coverage_Seq=0.8591160220994475;Coverage_Hmm=0.8885793871866295
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	9849	11042	398	+	.	ID=SEQF9099.1|VDUD01000001.1_15_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_3_CAS-I-E;coding_strand=+;E-value=5.1e-80;Score=266.7;Coverage_Seq=0.964824120603015;Coverage_Hmm=0.7451737451737451
SEQF9099.1|VDUD01000001.1	CCTyper	CDS	11039	11680	214	+	.	ID=SEQF9099.1|VDUD01000001.1_16_cas;Genome_ID=SEQF9099.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_3_CAS-I-E;coding_strand=+;E-value=1.1999999999999999e-83;Score=277.0;Coverage_Seq=0.9672897196261683;Coverage_Hmm=0.975609756097561