SEQF9141.1|QSKM01000005.1	CCTyper	repeat_region	9	244	236	+	.	ID=SEQF9141.1|QSKM01000005.1_1;Genome_ID=SEQF9141.1;Note=Predictor:CCtyper;Start:9;End:244;Consensus_Repeat:TTGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:28.0;Repeat_Identity:95.7;Spacer_Identity:40.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	direct_repeat	9	46	38	+	.	ID=SEQF9141.1|QSKM01000005.1_1_REPEAT1;Parent=SEQF9141.1|QSKM01000005.1_1;Note=TTGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	binding_site	47	74	28	+	.	ID=SEQF9141.1|QSKM01000005.1_1_SPACER1;Parent=SEQF9141.1|QSKM01000005.1_1;Note=TTCCATGTTATTCCTTTCTAATTCGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	direct_repeat	75	112	38	+	.	ID=SEQF9141.1|QSKM01000005.1_1_REPEAT2;Parent=SEQF9141.1|QSKM01000005.1_1;Note=ATGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	binding_site	113	140	28	+	.	ID=SEQF9141.1|QSKM01000005.1_1_SPACER2;Parent=SEQF9141.1|QSKM01000005.1_1;Note=TATTAGCGTCTGAGCCTTTCTTGGCCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	direct_repeat	141	178	38	+	.	ID=SEQF9141.1|QSKM01000005.1_1_REPEAT3;Parent=SEQF9141.1|QSKM01000005.1_1;Note=TTGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	binding_site	179	206	28	+	.	ID=SEQF9141.1|QSKM01000005.1_1_SPACER3;Parent=SEQF9141.1|QSKM01000005.1_1;Note=CGAAAACCATAAGAGCAGCATTGGTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	direct_repeat	207	244	38	+	.	ID=SEQF9141.1|QSKM01000005.1_1_REPEAT4;Parent=SEQF9141.1|QSKM01000005.1_1;Note=TCGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	repeat_region	20	521	502	+	.	ID=SEQF9141.1|QSKM01000006.1_2;Genome_ID=SEQF9141.1;Note=Predictor:CCtyper;Start:20;End:521;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Number_of_Repeats:8;Repeat_Length:35;Average_Spacer_Length:31.7;Repeat_Identity:94.6;Spacer_Identity:43.6;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.987;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	20	54	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT1;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACCTGTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	55	87	33	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER1;Parent=SEQF9141.1|QSKM01000006.1_2;Note=AACAGGATTTTGCGGAAACGAAAATGTTTATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	88	122	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT2;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	123	155	33	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER2;Parent=SEQF9141.1|QSKM01000006.1_2;Note=ACAAAGAAAAGGAATTAATTAATATATGGCACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	156	190	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT3;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	191	221	31	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER3;Parent=SEQF9141.1|QSKM01000006.1_2;Note=CCAAAAATTTGAGTATTAGGTAAGGGAAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	222	256	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT4;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	257	287	31	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER4;Parent=SEQF9141.1|QSKM01000006.1_2;Note=CAAATCACCTCTTATCCAGATAATGGGCGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	288	322	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT5;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	323	354	32	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER5;Parent=SEQF9141.1|QSKM01000006.1_2;Note=CCGAGTATGTAGACTTATCAAAGACACTTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	355	389	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT6;Parent=SEQF9141.1|QSKM01000006.1_2;Note=TTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	390	420	31	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER6;Parent=SEQF9141.1|QSKM01000006.1_2;Note=CAATTTAAATCATACGATGCAGTAGCTAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	421	455	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT7;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	binding_site	456	486	31	+	.	ID=SEQF9141.1|QSKM01000006.1_2_SPACER7;Parent=SEQF9141.1|QSKM01000006.1_2;Note=CAAGAACTTCAAGCATCCACTGGCTGGGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000006.1	CCTyper	direct_repeat	487	521	35	+	.	ID=SEQF9141.1|QSKM01000006.1_2_REPEAT8;Parent=SEQF9141.1|QSKM01000006.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTATAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9141.1|QSKM01000005.1	CCTyper	OPERON	314	6137	5824	-	.	ID=SEQF9141.1|QSKM01000005.1@1;Genome_ID=SEQF9141.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=1,2,3,4,5;E-values=1.40e-138,1.00e-31,2.30e-98,9.70e-163,1.20e-49;CoverageSeq=0.994,0.954,0.911,0.664,0.962;CoverageHMM=1.0,0.888,0.996,0.74,0.275;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9141.1|QSKM01000005.1	CCTyper	CDS	1682	2590	303	-	.	ID=SEQF9141.1|QSKM01000005.1_3_cas;Genome_ID=SEQF9141.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.3e-98;Score=325.7;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF9141.1|QSKM01000005.1	CCTyper	CDS	1354	1677	108	-	.	ID=SEQF9141.1|QSKM01000005.1_2_cas;Genome_ID=SEQF9141.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1e-31;Score=106.5;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF9141.1|QSKM01000005.1	CCTyper	CDS	2770	5493	908	-	.	ID=SEQF9141.1|QSKM01000005.1_4_cas;Genome_ID=SEQF9141.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=9.7e-163;Score=540.5;Coverage_Seq=0.6640969162995595;Coverage_Hmm=0.7397590361445783
SEQF9141.1|QSKM01000005.1	CCTyper	CDS	5502	6137	212	-	.	ID=SEQF9141.1|QSKM01000005.1_5_cas;Genome_ID=SEQF9141.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.2e-49;Score=166.3;Coverage_Seq=0.9622641509433962;Coverage_Hmm=0.2746987951807229
SEQF9141.1|QSKM01000005.1	CCTyper	CDS	314	1357	348	-	.	ID=SEQF9141.1|QSKM01000005.1_1_cas;Genome_ID=SEQF9141.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=1.4e-138;Score=458.5;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0