SEQF9281.1|JAGXBR010000001.1	CCTyper	repeat_region	159390	160020	631	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1;Genome_ID=SEQF9281.1;Note=Predictor:CCtyper;Start:159390;End:160020;Consensus_Repeat:GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:89.3;Spacer_Identity:42.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159390	159425	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT1;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GCGTTGAGCCCTACCTAATGGGTCTCTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159426	159455	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER1;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=CCCAGGCCCTCTGGCTGCCTCTATCTCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159456	159491	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT2;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=ATTCTAAACCTGTTTGATATAACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159492	159521	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER2;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=CACGTATGATTGGCATTCTGAATACTGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159522	159557	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT3;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159558	159587	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER3;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=CATATATCGCGAGATACCTTCCATATATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159588	159623	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT4;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159624	159653	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER4;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=TACTTGTCGCGCTCCAACTCGTAGGCTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159654	159689	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT5;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159690	159719	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER5;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=ATTACGATTGATGTTTATAAAGGATACTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159720	159755	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT6;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159756	159785	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER6;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=TCTCAATTGTGATTGGGTATCGTGTTCTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159786	159821	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT7;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159822	159851	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER7;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=TTGATCAACGGCCATCGAACGAGTTGCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159852	159887	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT8;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159888	159917	30	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER8;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GCCCACGATTCAAGGATTACACGGGCGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159918	159953	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT9;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	binding_site	159954	159984	31	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_SPACER9;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=TCGCTGACAACAAGACTGGTGAGCTTGCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	direct_repeat	159985	160020	36	+	.	ID=SEQF9281.1|JAGXBR010000001.1_1_REPEAT10;Parent=SEQF9281.1|JAGXBR010000001.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	repeat_region	3565	4384	820	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2;Genome_ID=SEQF9281.1;Note=Predictor:CCtyper;Start:3565;End:4384;Consensus_Repeat:GGATCACCCCCGCATACACGGGGAACAG;Number_of_Repeats:14;Repeat_Length:28;Average_Spacer_Length:32.9;Repeat_Identity:92.7;Spacer_Identity:43.0;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.972;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3565	3592	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT1;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATTACCCCCGCATATACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3593	3624	32	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER1;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=CGTAGCATTATGACCGTTGAGCAGTCCGGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3625	3652	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT2;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGGATCACCCCGCATACACGGGAAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3653	3685	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER2;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GCATTTAACGTCCAACCAATTGGAGCTGGATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3686	3713	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT3;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATTACCCCCGCATACGCGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3714	3746	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER3;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=ATTATTATTTCACATTTTCGGTGTATGGTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3747	3774	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT4;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACGCGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3775	3807	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER4;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=CACGGACTACGGCACACTCATGCAAGCTATCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3808	3835	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT5;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACGCGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3836	3868	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER5;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=TACTTGACCACAGCGACCAGAATCGTGAATTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3869	3896	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT6;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACGCGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3897	3929	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER6;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=TACTTGACCACAGCGACCAGAATCGTGAATTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3930	3957	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT7;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	3958	3990	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER7;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=CAGCTGACACCCGTACTACCTGACCCCATACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	3991	4018	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT8;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4019	4051	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER8;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=TCAAGAATCGCGACGCGCTCAAGTTTAAACGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4052	4079	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT9;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4080	4112	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER9;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=TCTATCGCGTGGTTGTTCGCGTCTTTCGGCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4113	4140	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT10;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4141	4173	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER10;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GAATTGAACGACTCCAGTAAAGCCTGGCAAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4174	4201	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT11;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4202	4234	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER11;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=CCGACATGAAGGTCGAAGACGCGGCGGGATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4235	4262	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT12;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4263	4295	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER12;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=ATGTGACTGGTTTGGTAATACTCGATCATCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4296	4323	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT13;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	binding_site	4324	4356	33	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_SPACER13;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=AACACGAAATTCTATGAGGGGGCCTAGCCATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000015.1	CCTyper	direct_repeat	4357	4384	28	+	.	ID=SEQF9281.1|JAGXBR010000015.1_2_REPEAT14;Parent=SEQF9281.1|JAGXBR010000015.1_2;Note=GGATCACCCCCGCATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	repeat_region	28298	28694	397	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3;Genome_ID=SEQF9281.1;Note=Predictor:CCtyper;Start:28298;End:28694;Consensus_Repeat:CTATTCCCCGTGTATGCGGGGGTGATCC;Number_of_Repeats:7;Repeat_Length:28;Average_Spacer_Length:33.5;Repeat_Identity:76.2;Spacer_Identity:44.0;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.979;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28298	28325	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT1;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTATTCCCCGTGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28326	28358	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER1;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTTATGGACACTGTGCTATCGCTGCCACAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28359	28386	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT2;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTATTCCCCGTGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28387	28419	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER2;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CGATGTGCCCATCTACTACTTGATAAGTTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28420	28447	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT3;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTATTCCCCGTGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28448	28480	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER3;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CGTTCATTTTGCTCGATATTTTTCGTTGGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28481	28508	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT4;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTATTACCCGTGTATACGAGGGTGACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28509	28543	35	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER4;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=TTAACGAAACCGTATTCTGCTGATTTGTCCTGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28544	28571	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT5;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTGTTCCCCGTATATACGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28572	28605	34	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER5;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=TTAACACGCCGGTAGTCCCGTTTTTGAGGGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28606	28633	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT6;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTGTTCCCCGTGTATATGGGGCTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	28634	28666	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_SPACER6;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CATGACTGCGCACTATACTGAGTCAGTGCGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	28667	28694	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_3_REPEAT7;Parent=SEQF9281.1|JAGXBR010000003.1_3;Note=CTTTTCCCTGTGTATACGGAAGTGATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	repeat_region	31425	31757	333	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4;Genome_ID=SEQF9281.1;Note=Predictor:CCtyper;Start:31425;End:31757;Consensus_Repeat:CTGTTCCCCGCGTATGCGGGGGTGATCC;Number_of_Repeats:6;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:82.7;Spacer_Identity:38.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31425	31452	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT1;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTGTTCCCCGCGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	31453	31485	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_SPACER1;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=TAATTTACGCTATCTAAGTTTATCAAACAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31486	31513	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT2;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTGTTCCCCGCGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	31514	31546	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_SPACER2;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CGTGAGAACAGTTCACCACTCCATGAATCCCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31547	31574	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT3;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTGTTCCCCGCGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	31575	31607	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_SPACER3;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=TGTGGCAAACAACTGGACGCTAGCCTTGGGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31608	31635	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT4;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTGTTCCCCGCGTATGCGGGGGTGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	31636	31668	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_SPACER4;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=TCGTTTCATCAAATTTGTCTCTGGGAGGGTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31669	31696	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT5;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTATTCCCCGTGCATACGGGGGTGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	binding_site	31697	31729	33	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_SPACER5;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CCATATTGATTCAAGTAAGGTACGTCAAGCTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000003.1	CCTyper	direct_repeat	31730	31757	28	+	.	ID=SEQF9281.1|JAGXBR010000003.1_4_REPEAT6;Parent=SEQF9281.1|JAGXBR010000003.1_4;Note=CTATTCCCCGTGTCTACGGGGGTGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	repeat_region	2137	2284	148	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5;Genome_ID=SEQF9281.1;Note=Predictor:CCtyper;Start:2137;End:2284;Consensus_Repeat:TTGCTACGAGCGAAAGTCTAAAAAATAG;Number_of_Repeats:3;Repeat_Length:28;Average_Spacer_Length:32.0;Repeat_Identity:100.0;Spacer_Identity:56.1;Spacer_Length_Sem:6.0;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:V-J;Subtype_Probability:0.447;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	direct_repeat	2137	2164	28	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5_REPEAT1;Parent=SEQF9281.1|JAGXBR010000087.1_5;Note=TTGCTACGAGCGAAAGTCTAAAAAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	binding_site	2165	2190	26	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5_SPACER1;Parent=SEQF9281.1|JAGXBR010000087.1_5;Note=ACCTTCGCGGGAGACCGTTGAAACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	direct_repeat	2191	2218	28	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5_REPEAT2;Parent=SEQF9281.1|JAGXBR010000087.1_5;Note=TTGCTACGAGCGAAAGTCTAAAAAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	binding_site	2219	2256	38	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5_SPACER2;Parent=SEQF9281.1|JAGXBR010000087.1_5;Note=ACCTTCGCGAAAGTCCGTTGATGACACCCCGCAAACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000087.1	CCTyper	direct_repeat	2257	2284	28	+	.	ID=SEQF9281.1|JAGXBR010000087.1_5_REPEAT3;Parent=SEQF9281.1|JAGXBR010000087.1_5;Note=TTGCTACGAGCGAAAGTCTAAAAAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9281.1|JAGXBR010000001.1	CCTyper	OPERON	160045	166189	6145	-	.	ID=SEQF9281.1|JAGXBR010000001.1@4;Genome_ID=SEQF9281.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=141,142,143,144;E-values=1.10e-77,1.10e-49,2.50e-81,1.00e-166;CoverageSeq=0.973,0.99,0.884,0.756;CoverageHMM=1.0,1.0,0.993,0.981;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9281.1|JAGXBR010000003.1	CCTyper	OPERON	20209	30868	10660	-	.	ID=SEQF9281.1|JAGXBR010000003.1@2;Genome_ID=SEQF9281.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=Cas6e_1_CAS-I-II-III-IV-V-VI,Cas5_0_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_1_CAS-I-E,Cas3_0_CAS-I,DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE;Positions=20,21,22,23,24,25,26,27;E-values=2.00e-53,3.00e-41,1.70e-118,8.30e-73,1.40e-105,6.80e-65,1.10e-35,1.70e-106;CoverageSeq=0.987,0.649,0.883,0.975,0.897,0.45,0.523,0.843;CoverageHMM=1.0,0.978,0.93,0.98,0.998,0.989,0.994,0.993;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	29915	30868	318	-	.	ID=SEQF9281.1|JAGXBR010000003.1_27_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=1.7000000000000002e-106;Score=352.9;Coverage_Seq=0.8427672955974843;Coverage_Hmm=0.9925650557620818
SEQF9281.1|JAGXBR010000001.1	CCTyper	CDS	161002	161907	302	-	.	ID=SEQF9281.1|JAGXBR010000001.1_143_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.5e-81;Score=270.5;Coverage_Seq=0.8841059602649006;Coverage_Hmm=0.9927272727272727
SEQF9281.1|JAGXBR010000001.1	CCTyper	CDS	160719	161024	102	-	.	ID=SEQF9281.1|JAGXBR010000001.1_142_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-49;Score=164.5;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	25019	27769	917	-	.	ID=SEQF9281.1|JAGXBR010000003.1_25_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=6.8000000000000006e-65;Score=217.1;Coverage_Seq=0.45038167938931295;Coverage_Hmm=0.9886685552407932
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	20877	21602	242	-	.	ID=SEQF9281.1|JAGXBR010000003.1_21_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=-;E-value=3e-41;Score=138.9;Coverage_Seq=0.6487603305785123;Coverage_Hmm=0.978021978021978
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	20209	20877	223	-	.	ID=SEQF9281.1|JAGXBR010000003.1_20_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2e-53;Score=179.2;Coverage_Seq=0.9865470852017937;Coverage_Hmm=1.0
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	21583	22662	360	-	.	ID=SEQF9281.1|JAGXBR010000003.1_22_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1.7000000000000002e-118;Score=393.8;Coverage_Seq=0.8833333333333333;Coverage_Hmm=0.9303621169916435
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	23263	25014	584	-	.	ID=SEQF9281.1|JAGXBR010000003.1_24_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=-;E-value=1.3999999999999998e-105;Score=351.8;Coverage_Seq=0.8972602739726028;Coverage_Hmm=0.9978902953586498
SEQF9281.1|JAGXBR010000001.1	CCTyper	CDS	162101	166189	1363	-	.	ID=SEQF9281.1|JAGXBR010000001.1_144_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1e-166;Score=554.4;Coverage_Seq=0.7556859867938371;Coverage_Hmm=0.980722891566265
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	22662	23273	204	-	.	ID=SEQF9281.1|JAGXBR010000003.1_23_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=8.3e-73;Score=241.9;Coverage_Seq=0.9754901960784313;Coverage_Hmm=0.9798994974874372
SEQF9281.1|JAGXBR010000001.1	CCTyper	CDS	160045	160722	226	-	.	ID=SEQF9281.1|JAGXBR010000001.1_141_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=1.1e-77;Score=258.3;Coverage_Seq=0.9734513274336283;Coverage_Hmm=1.0
SEQF9281.1|JAGXBR010000003.1	CCTyper	CDS	29019	29918	300	-	.	ID=SEQF9281.1|JAGXBR010000003.1_26_cas;Genome_ID=SEQF9281.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-35;Score=120.8;Coverage_Seq=0.5233333333333333;Coverage_Hmm=0.99375