SEQF9291.1|JAGYHB010000016.1	CCTyper	repeat_region	70044	70557	514	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1;Genome_ID=SEQF9291.1;Note=Predictor:CCtyper;Start:70044;End:70557;Consensus_Repeat:CTGTTCCCCGTGTATGCGGGGGT;Number_of_Repeats:9;Repeat_Length:23;Average_Spacer_Length:38.4;Repeat_Identity:79.5;Spacer_Identity:49.4;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: IV-A1;Cas_Subtype_Prediction:IV-A1;Subtype_Probability:0.882;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70044	70066	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT1;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTATTCCCCGTGTATGCGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70067	70104	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER1;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GATCCTAACGACAATGCAGACCAAACCAGTCAGACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70105	70127	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT2;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCCCCGTGTATGCGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70128	70165	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER2;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GATCCCAGCACATTGATGGATGTGCAAACAGCGGTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70166	70188	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT3;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTATTCCCCGTGTATGCGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70189	70226	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER3;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GATCCTGACGCTATGAAAATCTTAGCTTATGACAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70227	70249	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT4;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCCCCGTGTATGCGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70250	70287	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER4;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=AATCCCATTGCACATGTGGCCAAAACGTCGACGCCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70288	70310	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT5;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCCCCGTGTATGCGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70311	70348	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER5;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=AATCCCATTGCACATGTGGCCAAAACGTCGACGCCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70349	70371	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT6;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCCCCGTGTATACGAGGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70372	70411	40	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER6;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GACCCTTAACGAAACCGTATTCTGCTGATTTGTCCTGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70412	70434	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT7;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCCCCGTATATACGGGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70435	70473	39	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER7;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GATCCTTAACACGCCGGTAGTCCCGTTTTTGGGGGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70474	70496	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT8;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTGTTCTCCGTGTATACGGGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	binding_site	70497	70534	38	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_SPACER8;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=GATCCCATGACTGCGCACTATACTGAGTCAGCCCGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	direct_repeat	70535	70557	23	+	.	ID=SEQF9291.1|JAGYHB010000016.1_1_REPEAT9;Parent=SEQF9291.1|JAGYHB010000016.1_1;Note=CTTTTCCCTGTGTATACAGGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9291.1|JAGYHB010000016.1	CCTyper	OPERON	61958	72735	10778	-	.	ID=SEQF9291.1|JAGYHB010000016.1@2;Genome_ID=SEQF9291.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas6e_1_CAS-I-II-III-IV-V-VI,Cas5_0_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_1_CAS-I-E,Cas3_0_CAS-I,DEDDh_0_CAS-I-II-III-IV-V-VI,Cas2_10_CAS-I-II-III-IV-V-VI,Cas1_0_IE;Positions=60,61,62,63,64,65,66,67,68;E-values=1.40e-53,3.20e-41,1.90e-118,1.80e-73,5.20e-106,8.70e-64,2.30e-19,1.00e-30,1.60e-107;CoverageSeq=0.987,0.649,0.889,0.975,0.897,0.449,0.892,0.565,0.843;CoverageHMM=1.0,0.978,0.936,0.98,0.998,0.986,0.731,1.0,0.993;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	71782	72735	318	-	.	ID=SEQF9291.1|JAGYHB010000016.1_68_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=1.6e-107;Score=356.4;Coverage_Seq=0.8427672955974843;Coverage_Hmm=0.9925650557620818
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	71282	71785	168	-	.	ID=SEQF9291.1|JAGYHB010000016.1_67_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9.999999999999999e-31;Score=103.4;Coverage_Seq=0.5654761904761905;Coverage_Hmm=1.0
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	66768	69515	916	-	.	ID=SEQF9291.1|JAGYHB010000016.1_65_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=8.7e-64;Score=213.5;Coverage_Seq=0.44868995633187775;Coverage_Hmm=0.9858356940509915
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	62626	63351	242	-	.	ID=SEQF9291.1|JAGYHB010000016.1_61_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=-;E-value=3.1999999999999996e-41;Score=138.8;Coverage_Seq=0.6487603305785123;Coverage_Hmm=0.978021978021978
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	61958	62626	223	-	.	ID=SEQF9291.1|JAGYHB010000016.1_60_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-53;Score=179.8;Coverage_Seq=0.9865470852017937;Coverage_Hmm=1.0
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	63332	64411	360	-	.	ID=SEQF9291.1|JAGYHB010000016.1_62_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1.9e-118;Score=393.7;Coverage_Seq=0.8888888888888888;Coverage_Hmm=0.935933147632312
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	65012	66763	584	-	.	ID=SEQF9291.1|JAGYHB010000016.1_64_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=-;E-value=5.2e-106;Score=353.2;Coverage_Seq=0.8972602739726028;Coverage_Hmm=0.9978902953586498
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	64411	65022	204	-	.	ID=SEQF9291.1|JAGYHB010000016.1_63_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=1.8e-73;Score=244.1;Coverage_Seq=0.9754901960784313;Coverage_Hmm=0.9798994974874372
SEQF9291.1|JAGYHB010000016.1	CCTyper	CDS	70887	71276	130	-	.	ID=SEQF9291.1|JAGYHB010000016.1_66_cas;Genome_ID=SEQF9291.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.3e-19;Score=67.8;Coverage_Seq=0.8923076923076924;Coverage_Hmm=0.73125