SEQF9342.1|LR134242.1	CCTyper	repeat_region	102352	102913	562	+	.	ID=SEQF9342.1|LR134242.1_1;Genome_ID=SEQF9342.1;Note=Predictor:CCtyper;Start:102352;End:102913;Consensus_Repeat:GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Number_of_Repeats:9;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:90.8;Spacer_Identity:45.5;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102352	102387	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT1;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102388	102417	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER1;Parent=SEQF9342.1|LR134242.1_1;Note=AAACCATGTATCCCTCGTTAGTTTTTAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102418	102453	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT2;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102454	102483	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER2;Parent=SEQF9342.1|LR134242.1_1;Note=GTGCAATTTTAGGTGTTCTTGCTACGTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102484	102519	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT3;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102520	102548	29	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER3;Parent=SEQF9342.1|LR134242.1_1;Note=TGTAGGTATCTTTGTAAGTTGTAATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102549	102584	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT4;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGATATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102585	102614	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER4;Parent=SEQF9342.1|LR134242.1_1;Note=CGGTTGATTTAACAGTTAGAGCTTTTATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102615	102650	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT5;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102651	102680	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER5;Parent=SEQF9342.1|LR134242.1_1;Note=TTTTTAAATTTGTGATACCGATGTTTTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102681	102716	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT6;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102717	102746	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER6;Parent=SEQF9342.1|LR134242.1_1;Note=AAACTGATTTAGCAGTGTTTAATGGTGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102747	102782	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT7;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102783	102812	30	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER7;Parent=SEQF9342.1|LR134242.1_1;Note=TTTCATTAGCTTATCTATCAGATATTTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102813	102848	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT8;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	102849	102877	29	+	.	ID=SEQF9342.1|LR134242.1_1_SPACER8;Parent=SEQF9342.1|LR134242.1_1;Note=GGTGTTTTTAACAAGTCTAATCCGTATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	102878	102913	36	+	.	ID=SEQF9342.1|LR134242.1_1_REPEAT9;Parent=SEQF9342.1|LR134242.1_1;Note=GTTTTAGTACTTTGTAATTTGAATATTGAAAGTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	repeat_region	108588	108951	364	+	.	ID=SEQF9342.1|LR134242.1_2;Genome_ID=SEQF9342.1;Note=Predictor:CCtyper;Start:108588;End:108951;Consensus_Repeat:GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:29.6;Repeat_Identity:94.9;Spacer_Identity:41.8;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108588	108623	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT1;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	108624	108652	29	+	.	ID=SEQF9342.1|LR134242.1_2_SPACER1;Parent=SEQF9342.1|LR134242.1_2;Note=TTTCATTATTGGCTTATTCATCATATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108653	108688	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT2;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	108689	108718	30	+	.	ID=SEQF9342.1|LR134242.1_2_SPACER2;Parent=SEQF9342.1|LR134242.1_2;Note=CAGGATATGCTTATTTGTTTGCGATTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108719	108754	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT3;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	108755	108783	29	+	.	ID=SEQF9342.1|LR134242.1_2_SPACER3;Parent=SEQF9342.1|LR134242.1_2;Note=ATATCAAATGCTTAACTTAGGTAAATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108784	108819	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT4;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	108820	108849	30	+	.	ID=SEQF9342.1|LR134242.1_2_SPACER4;Parent=SEQF9342.1|LR134242.1_2;Note=TCCTGCATACGAAAATACTTCAATCAGTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108850	108885	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT5;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	binding_site	108886	108915	30	+	.	ID=SEQF9342.1|LR134242.1_2_SPACER5;Parent=SEQF9342.1|LR134242.1_2;Note=GCTTTTTGAAAAATACAACTGAAGCTTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	direct_repeat	108916	108951	36	+	.	ID=SEQF9342.1|LR134242.1_2_REPEAT6;Parent=SEQF9342.1|LR134242.1_2;Note=GTTTTAGTACTCTGTAATTTTAGGTATGAAGTAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9342.1|LR134242.1	CCTyper	OPERON	103165	108568	5404	+	.	ID=SEQF9342.1|LR134242.1@5;Genome_ID=SEQF9342.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=8.0;Genes=Cas9_0_II,Cas1_0_II,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_8_CAS-II-A;Positions=92,93,94,95;E-values=3.60e-133,6.50e-88,3.70e-37,4.90e-144;CoverageSeq=0.856,0.91,0.99,0.991;CoverageHMM=0.943,1.0,0.879,0.997;Strand_Interference=1;Strand_Adaptation=1
SEQF9342.1|LR134242.1	CCTyper	CDS	106332	107234	301	+	.	ID=SEQF9342.1|LR134242.1_93_cas;Genome_ID=SEQF9342.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=+;E-value=6.5e-88;Score=291.6;Coverage_Seq=0.9102990033222591;Coverage_Hmm=1.0
SEQF9342.1|LR134242.1	CCTyper	CDS	107239	107547	103	+	.	ID=SEQF9342.1|LR134242.1_94_cas;Genome_ID=SEQF9342.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.7e-37;Score=124.2;Coverage_Seq=0.9902912621359223;Coverage_Hmm=0.8793103448275862
SEQF9342.1|LR134242.1	CCTyper	CDS	103165	106329	1055	+	.	ID=SEQF9342.1|LR134242.1_92_cas;Genome_ID=SEQF9342.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=3.6e-133;Score=442.7;Coverage_Seq=0.8559241706161137;Coverage_Hmm=0.9433734939759036
SEQF9342.1|LR134242.1	CCTyper	CDS	107561	108568	336	+	.	ID=SEQF9342.1|LR134242.1_95_cas;Genome_ID=SEQF9342.1;Feature_type=CDS;Product=Cas Prediction : Csn2_8_CAS-II-A;coding_strand=+;E-value=4.9e-144;Score=476.6;Coverage_Seq=0.9910714285714286;Coverage_Hmm=0.9970149253731343