SEQF9433.1|LT906445.1	CCTyper	repeat_region	2060841	2061178	338	+	.	ID=SEQF9433.1|LT906445.1_1;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2060841;End:2061178;Consensus_Repeat:AGTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC;Number_of_Repeats:5;Repeat_Length:36.0;Average_Spacer_Length:39.5;Repeat_Identity:83.4;Spacer_Identity:45.2;Spacer_Length_Sem:1.9;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2060841	2060876	36	+	.	ID=SEQF9433.1|LT906445.1_1_REPEAT1;Parent=SEQF9433.1|LT906445.1_1;Note=AAAAACCGGCCCCAAATGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2060877	2060916	40	+	.	ID=SEQF9433.1|LT906445.1_1_SPACER1;Parent=SEQF9433.1|LT906445.1_1;Note=TAGAATTAGATGAAGTATCTGTAGCTGATAGCACTAGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2060917	2060952	36	+	.	ID=SEQF9433.1|LT906445.1_1_REPEAT2;Parent=SEQF9433.1|LT906445.1_1;Note=GGTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2060953	2060994	42	+	.	ID=SEQF9433.1|LT906445.1_1_SPACER2;Parent=SEQF9433.1|LT906445.1_1;Note=ATTGTAAAGATCAAGAAGGAACTTATTCCATATATTTCAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2060995	2061030	36	+	.	ID=SEQF9433.1|LT906445.1_1_REPEAT3;Parent=SEQF9433.1|LT906445.1_1;Note=AGTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061031	2061064	34	+	.	ID=SEQF9433.1|LT906445.1_1_SPACER3;Parent=SEQF9433.1|LT906445.1_1;Note=TAACTTATAATACTCCTAGATTGAATGCTATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061065	2061100	36	+	.	ID=SEQF9433.1|LT906445.1_1_REPEAT4;Parent=SEQF9433.1|LT906445.1_1;Note=AGTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061101	2061142	42	+	.	ID=SEQF9433.1|LT906445.1_1_SPACER4;Parent=SEQF9433.1|LT906445.1_1;Note=AAACCAAGTATTGCAACTCTTATTAAAAAAGATGAGTAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061143	2061178	36	+	.	ID=SEQF9433.1|LT906445.1_1_REPEAT5;Parent=SEQF9433.1|LT906445.1_1;Note=AGTTTCCGTCCCCATCAAGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	repeat_region	2061426	2062053	628	+	.	ID=SEQF9433.1|LT906445.1_2;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2061426;End:2062053;Consensus_Repeat:GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Number_of_Repeats:9;Repeat_Length:35.0;Average_Spacer_Length:39.1;Repeat_Identity:91.7;Spacer_Identity:45.3;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:IV-D;Subtype_Probability:0.613;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061426	2061460	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT1;Parent=SEQF9433.1|LT906445.1_2;Note=ATTAATATACTATAAACGTTAATTGTTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061461	2061498	38	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER1;Parent=SEQF9433.1|LT906445.1_2;Note=CTAATCACTGATACTTGTGGTATGCTTGAAGCTTACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061499	2061533	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT2;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061534	2061573	40	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER2;Parent=SEQF9433.1|LT906445.1_2;Note=AGGTGCAGATAGAAAATATCGTCGCCCTTGGAAGTATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061574	2061608	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT3;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061609	2061645	37	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER3;Parent=SEQF9433.1|LT906445.1_2;Note=TCTTCAATTTCAATACTGGAATTGATTTCTACTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061646	2061680	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT4;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061681	2061719	39	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER4;Parent=SEQF9433.1|LT906445.1_2;Note=TGTAAAATCTTTACAAGATACCACTAAGACAGCGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061720	2061754	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT5;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061755	2061793	39	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER5;Parent=SEQF9433.1|LT906445.1_2;Note=CGACAATATTGCAATGGATCAAGTTCGTAACGATGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061794	2061828	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT6;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061829	2061869	41	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER6;Parent=SEQF9433.1|LT906445.1_2;Note=TGTCAAGAGAGGAGAATAATATGAACAGACAAAAAAAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061870	2061904	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT7;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061905	2061943	39	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER7;Parent=SEQF9433.1|LT906445.1_2;Note=TGAAGAGCAGTGAAAGTGTACAATCTGTTATGAAAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2061944	2061978	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT8;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2061979	2062018	40	+	.	ID=SEQF9433.1|LT906445.1_2_SPACER8;Parent=SEQF9433.1|LT906445.1_2;Note=TTATTCAAAGTAATCGTTCTGTACAATCTATTAGTAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2062019	2062053	35	+	.	ID=SEQF9433.1|LT906445.1_2_REPEAT9;Parent=SEQF9433.1|LT906445.1_2;Note=GTTTCAATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	repeat_region	2079009	2079488	480	+	.	ID=SEQF9433.1|LT906445.1_3;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2079009;End:2079488;Consensus_Repeat:ATACCGTAAACGGTAAGAGCGGTTGCAAC;Number_of_Repeats:7;Repeat_Length:29.0;Average_Spacer_Length:46.2;Repeat_Identity:85.6;Spacer_Identity:47.4;Spacer_Length_Sem:2.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-D;Subtype_Probability:0.695;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079009	2079037	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT1;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGTGCTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079038	2079084	47	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER1;Parent=SEQF9433.1|LT906445.1_3;Note=CTCTTTATGCAAATGCATAAAGAAATTCAAAACTCCCAATAGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079085	2079113	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT2;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGAGCGGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079114	2079155	42	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER2;Parent=SEQF9433.1|LT906445.1_3;Note=TTTAGGATTTGTAATCGGATTCGAATTATTTCTAGCGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079156	2079184	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT3;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGAGCGGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079185	2079225	41	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER3;Parent=SEQF9433.1|LT906445.1_3;Note=CCAAAGTAATTGTCATTTTGAAGTACAGCAATAATGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079226	2079254	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT4;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGAGCGGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079255	2079303	49	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER4;Parent=SEQF9433.1|LT906445.1_3;Note=GAAGCTGCAGACATGGCAATAGTAGAATATTCAACCCCTTCTAGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079304	2079332	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT5;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGAGCGGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079333	2079373	41	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER5;Parent=SEQF9433.1|LT906445.1_3;Note=TCTACATGATGCTGAAAATAAGAAAGCAGAACTAGGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079374	2079402	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT6;Parent=SEQF9433.1|LT906445.1_3;Note=ATACCGTAAACGGTAAGAGCGGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2079403	2079459	57	+	.	ID=SEQF9433.1|LT906445.1_3_SPACER6;Parent=SEQF9433.1|LT906445.1_3;Note=AGCATACCTCAGAAAGCCAGTATTCATGGGGCTTAAAATTAAGTTTTGGCAAACCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2079460	2079488	29	+	.	ID=SEQF9433.1|LT906445.1_3_REPEAT7;Parent=SEQF9433.1|LT906445.1_3;Note=ACACCGTAAACGGTCAGATTGGGCTCCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	repeat_region	2091099	2092155	1057	+	.	ID=SEQF9433.1|LT906445.1_4;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2091099;End:2092155;Consensus_Repeat:GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Number_of_Repeats:15;Repeat_Length:35.0;Average_Spacer_Length:38.0;Repeat_Identity:87.4;Spacer_Identity:46.9;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: IV-D;Cas_Subtype_Prediction:IV-D;Subtype_Probability:0.827;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091099	2091133	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT1;Parent=SEQF9433.1|LT906445.1_4;Note=AGTACACATATCGTAACGATAAATACTATTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091134	2091173	40	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER1;Parent=SEQF9433.1|LT906445.1_4;Note=CGCACTTAATGAAGCAAGAAGTTACCTTGAACGAAATGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091174	2091208	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT2;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACTGTAAACAGTAAGTACTATTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091209	2091244	36	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER2;Parent=SEQF9433.1|LT906445.1_4;Note=GGTCCGACTGCGAGCGGTCAGAAATCAATTTTAGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091245	2091279	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT3;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091280	2091319	40	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER3;Parent=SEQF9433.1|LT906445.1_4;Note=AAAAACTAATTGATGCGTGAAGCTGGCTCAACTCCGATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091320	2091354	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT4;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGTACTATTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091355	2091390	36	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER4;Parent=SEQF9433.1|LT906445.1_4;Note=GAGAATTATTATGTGTGTTATCGCAGTTTATGAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091391	2091425	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT5;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091426	2091466	41	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER5;Parent=SEQF9433.1|LT906445.1_4;Note=TCTGCAGCATTTGGCCATAAAAATAAAGCTATTGGTTTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091467	2091501	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT6;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGTACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091502	2091538	37	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER6;Parent=SEQF9433.1|LT906445.1_4;Note=TTGATGATGAAGGCGAATTCCATGAAGAAGGTGAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091539	2091573	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT7;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091574	2091613	40	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER7;Parent=SEQF9433.1|LT906445.1_4;Note=TTGTATGTTACGATTATTTATTATAATGTTTATAAAGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091614	2091648	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT8;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091649	2091686	38	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER8;Parent=SEQF9433.1|LT906445.1_4;Note=TAGCCAGCTTGATAATATTAATAATATTGATCTTATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091687	2091721	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT9;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091722	2091759	38	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER9;Parent=SEQF9433.1|LT906445.1_4;Note=TTAACATTTGATAATATTGTGCACCGCCATCAATACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091760	2091794	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT10;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091795	2091832	38	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER10;Parent=SEQF9433.1|LT906445.1_4;Note=CCTGTAAGTCACTATCATAAAGCACTAGGCGAATGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091833	2091867	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT11;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091868	2091905	38	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER11;Parent=SEQF9433.1|LT906445.1_4;Note=CACGACTTTAATAATTATAGTCGTGACTAATTTATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091906	2091940	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT12;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2091941	2091976	36	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER12;Parent=SEQF9433.1|LT906445.1_4;Note=TTTGATGTTCTGATTTAGTAATAATATTCATATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2091977	2092011	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT13;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2092012	2092049	38	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER13;Parent=SEQF9433.1|LT906445.1_4;Note=CACGACTTTAATAATTATAGTCGTGACTAATTTATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2092050	2092084	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT14;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2092085	2092120	36	+	.	ID=SEQF9433.1|LT906445.1_4_SPACER14;Parent=SEQF9433.1|LT906445.1_4;Note=TTTGATGTTCTGATTTAGTAATAATATTCATATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2092121	2092155	35	+	.	ID=SEQF9433.1|LT906445.1_4_REPEAT15;Parent=SEQF9433.1|LT906445.1_4;Note=GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	repeat_region	2053516	2053859	344	+	.	ID=SEQF9433.1|LT906445.1-26_5;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2053516;End:2053859;Consensus_Repeat:GTTTCCGTCCCCTAATAGGGATTATTTAATTTAAC;Number_of_Repeats:5;Repeat_Length:34.4;Average_Spacer_Length:43.0;Repeat_Identity:78.3;Spacer_Identity:41.5;Spacer_Length_Sem:0.9;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.853;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2053516	2053549	34	+	.	ID=SEQF9433.1|LT906445.1-26_5_REPEAT1;Parent=SEQF9433.1|LT906445.1-26_5;Note=TTTTCTGACCCCATTGGAGATTATTTAATTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2053550	2053593	44	+	.	ID=SEQF9433.1|LT906445.1-26_5_SPACER1;Parent=SEQF9433.1|LT906445.1-26_5;Note=ACCACGTATGCTGCAGTTGGAATTCCTAAGCGCTATTATGATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2053594	2053628	35	+	.	ID=SEQF9433.1|LT906445.1-26_5_REPEAT2;Parent=SEQF9433.1|LT906445.1-26_5;Note=GTTTCCGTCCCCTAATGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2053629	2053670	42	+	.	ID=SEQF9433.1|LT906445.1-26_5_SPACER2;Parent=SEQF9433.1|LT906445.1-26_5;Note=CGTGTACGGTAATTTATTCGATAATACAGAAGATAAGTTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2053671	2053705	35	+	.	ID=SEQF9433.1|LT906445.1-26_5_REPEAT3;Parent=SEQF9433.1|LT906445.1-26_5;Note=GTTTCCGTCCCCTAATAGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2053706	2053746	41	+	.	ID=SEQF9433.1|LT906445.1-26_5_SPACER3;Parent=SEQF9433.1|LT906445.1-26_5;Note=TGGCTAAGAAGCACGCCTTACTCGGTGCATCAAGTAGTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2053747	2053780	34	+	.	ID=SEQF9433.1|LT906445.1-26_5_REPEAT4;Parent=SEQF9433.1|LT906445.1-26_5;Note=TTTCCGTCCCCTAATGGGGATTATTTAGTTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2053781	2053825	45	+	.	ID=SEQF9433.1|LT906445.1-26_5_SPACER4;Parent=SEQF9433.1|LT906445.1-26_5;Note=AACAATGCTAGTCAAAAATGAAACAAAATATTGTTGGTATTTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2053826	2053859	34	+	.	ID=SEQF9433.1|LT906445.1-26_5_REPEAT5;Parent=SEQF9433.1|LT906445.1-26_5;Note=TTTCCGTTCCCATCAGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	repeat_region	2093634	2093985	352	+	.	ID=SEQF9433.1|LT906445.1-26_12;Genome_ID=SEQF9433.1;Note=Predictor:CCtyper;Start:2093634;End:2093985;Consensus_Repeat:GTTTCCGTCCCCTAATGGGGATCATTTAATTTAAC;Number_of_Repeats:5;Repeat_Length:34.2;Average_Spacer_Length:45.2;Repeat_Identity:79.8;Spacer_Identity:45.6;Spacer_Length_Sem:0.9;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2093634	2093668	35	+	.	ID=SEQF9433.1|LT906445.1-26_12_REPEAT1;Parent=SEQF9433.1|LT906445.1-26_12;Note=GTTTCCGTCCCCAAATGAGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2093669	2093715	47	+	.	ID=SEQF9433.1|LT906445.1-26_12_SPACER1;Parent=SEQF9433.1|LT906445.1-26_12;Note=ACATGACGGATAAAGAATATAGAGAATTAGCCAAAGAGTACCTAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2093716	2093746	31	+	.	ID=SEQF9433.1|LT906445.1-26_12_REPEAT2;Parent=SEQF9433.1|LT906445.1-26_12;Note=TCCGTCCCCTAATGAGGATCATTTTATTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2093747	2093791	45	+	.	ID=SEQF9433.1|LT906445.1-26_12_SPACER2;Parent=SEQF9433.1|LT906445.1-26_12;Note=TATTAGTGCAACAAAAGAAGCTATTGCTATAGGTCATATAGCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2093792	2093826	35	+	.	ID=SEQF9433.1|LT906445.1-26_12_REPEAT3;Parent=SEQF9433.1|LT906445.1-26_12;Note=GTTTCCGTCTCCATCAGGGGATTATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2093827	2093872	46	+	.	ID=SEQF9433.1|LT906445.1-26_12_SPACER3;Parent=SEQF9433.1|LT906445.1-26_12;Note=AAGCATTGAATATCTATGATTTCACAGTGCAAACTCAATTAGTACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2093873	2093907	35	+	.	ID=SEQF9433.1|LT906445.1-26_12_REPEAT4;Parent=SEQF9433.1|LT906445.1-26_12;Note=GTTTCCGTCCCCTAATGGGGATCATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	binding_site	2093908	2093950	43	+	.	ID=SEQF9433.1|LT906445.1-26_12_SPACER4;Parent=SEQF9433.1|LT906445.1-26_12;Note=ATTCGTGAAATGACGGGTGCAGATGAAGAAAGTTTACAAGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	direct_repeat	2093951	2093985	35	+	.	ID=SEQF9433.1|LT906445.1-26_12_REPEAT5;Parent=SEQF9433.1|LT906445.1-26_12;Note=GTTTCCGTCCCCTAATGGGGATCATTTAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9433.1|LT906445.1	CCTyper	OPERON	2053966	2060670	6705	-	.	ID=SEQF9433.1|LT906445.1@36;Genome_ID=SEQF9433.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=15.0;Genes=Cas6_15_CAS-I-II-III-IV-V-VI,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III;Positions=1802,1803,1804,1805,1806,1807;E-values=3.40e-16,2.70e-19,7.20e-34,7.50e-65,2.50e-17,2.20e-216;CoverageSeq=0.447,0.781,0.961,0.86,0.743,0.819;CoverageHMM=1.0,0.756,0.952,0.949,0.945,1.0;Strand_Interference=-1;Strand_Adaptation=NA
SEQF9433.1|LT906445.1	CCTyper	OPERON	2067367	2077784	10418	-	.	ID=SEQF9433.1|LT906445.1@37;Genome_ID=SEQF9433.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=67%;Complete_Adaptation=NA;Best_type=III-D;Best_score=16.0;Genes=Cas6_0_CAS-I-III-B,Csm3_0_IIIAD,Csx19_1_CAS-III-D,Csm3gr7_2_CAS-III-A-III-D,Csx10_0_IIID,Csm3gr7_11_CAS-III-A-III-D,Cas10_7_CAS-III,Csx20_1_CAS-I-III,Cas1_8_CAS-I-II-III-IV-V-VI,Cas2_11_CAS-I-II-III-IV-V-VI;Positions=1812,1813,1814,1815,1816,1817,1818,1819,1820,1821;E-values=2.40e-15,1.80e-160,3.10e-56,2.60e-33,4.10e-12,6.30e-39,8.90e-81,2.90e-58,6.90e-76,1.20e-17;CoverageSeq=0.664,0.909,0.989,0.665,0.478,0.926,0.783,0.992,0.846,0.902;CoverageHMM=0.674,0.969,0.985,0.994,0.607,0.907,0.988,1.0,0.996,0.972;Strand_Interference=-1;Strand_Adaptation=NA
SEQF9433.1|LT906445.1	CCTyper	CDS	2058121	2060670	850	-	.	ID=SEQF9433.1|LT906445.1_1807_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=2.2000000000000002e-216;Score=717.1;Coverage_Seq=0.8188235294117647;Coverage_Hmm=1.0
SEQF9433.1|LT906445.1	CCTyper	CDS	2074306	2075907	534	-	.	ID=SEQF9433.1|LT906445.1_1818_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=-;E-value=8.9e-81;Score=268.7;Coverage_Seq=0.7827715355805244;Coverage_Hmm=0.9878048780487805
SEQF9433.1|LT906445.1	CCTyper	CDS	2076496	2077491	332	-	.	ID=SEQF9433.1|LT906445.1_1820_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas1_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.9e-76;Score=251.9;Coverage_Seq=0.8463855421686747;Coverage_Hmm=0.9964664310954063
SEQF9433.1|LT906445.1	CCTyper	CDS	2077509	2077784	92	-	.	ID=SEQF9433.1|LT906445.1_1821_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas2_11_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-17;Score=60.7;Coverage_Seq=0.9021739130434783;Coverage_Hmm=0.971830985915493
SEQF9433.1|LT906445.1	CCTyper	CDS	2067367	2068170	268	-	.	ID=SEQF9433.1|LT906445.1_1812_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-III-B;coding_strand=-;E-value=2.4e-15;Score=53.0;Coverage_Seq=0.664179104477612;Coverage_Hmm=0.6737588652482269
SEQF9433.1|LT906445.1	CCTyper	CDS	2053966	2054736	257	-	.	ID=SEQF9433.1|LT906445.1_1802_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Cas6_15_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.4e-16;Score=56.6;Coverage_Seq=0.4474708171206226;Coverage_Hmm=1.0
SEQF9433.1|LT906445.1	CCTyper	CDS	2057598	2058110	171	-	.	ID=SEQF9433.1|LT906445.1_1806_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=2.5e-17;Score=60.7;Coverage_Seq=0.7426900584795322;Coverage_Hmm=0.9454545454545454
SEQF9433.1|LT906445.1	CCTyper	CDS	2068170	2070182	671	-	.	ID=SEQF9433.1|LT906445.1_1813_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm3_0_IIIAD;coding_strand=-;E-value=1.8e-160;Score=532.6;Coverage_Seq=0.9090909090909091;Coverage_Hmm=0.9692307692307692
SEQF9433.1|LT906445.1	CCTyper	CDS	2073656	2074303	216	-	.	ID=SEQF9433.1|LT906445.1_1817_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_11_CAS-III-A-III-D;coding_strand=-;E-value=6.3e-39;Score=130.4;Coverage_Seq=0.9259259259259259;Coverage_Hmm=0.9074074074074074
SEQF9433.1|LT906445.1	CCTyper	CDS	2056902	2057585	228	-	.	ID=SEQF9433.1|LT906445.1_1805_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=7.5e-65;Score=215.5;Coverage_Seq=0.8596491228070176;Coverage_Hmm=0.9488372093023256
SEQF9433.1|LT906445.1	CCTyper	CDS	2070740	2072074	445	-	.	ID=SEQF9433.1|LT906445.1_1815_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_2_CAS-III-A-III-D;coding_strand=-;E-value=2.6000000000000003e-33;Score=112.8;Coverage_Seq=0.6651685393258427;Coverage_Hmm=0.9944444444444445
SEQF9433.1|LT906445.1	CCTyper	CDS	2055894	2056892	333	-	.	ID=SEQF9433.1|LT906445.1_1804_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=7.2e-34;Score=114.2;Coverage_Seq=0.960960960960961;Coverage_Hmm=0.9523809523809523
SEQF9433.1|LT906445.1	CCTyper	CDS	2054726	2055901	392	-	.	ID=SEQF9433.1|LT906445.1_1803_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=2.7e-19;Score=66.4;Coverage_Seq=0.7806122448979592;Coverage_Hmm=0.7561643835616438
SEQF9433.1|LT906445.1	CCTyper	CDS	2072088	2073668	527	-	.	ID=SEQF9433.1|LT906445.1_1816_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csx10_0_IIID;coding_strand=-;E-value=4.1e-12;Score=42.7;Coverage_Seq=0.4781783681214421;Coverage_Hmm=0.6069651741293532
SEQF9433.1|LT906445.1	CCTyper	CDS	2070184	2070747	188	-	.	ID=SEQF9433.1|LT906445.1_1814_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csx19_1_CAS-III-D;coding_strand=-;E-value=3.1e-56;Score=186.7;Coverage_Seq=0.9893617021276596;Coverage_Hmm=0.985
SEQF9433.1|LT906445.1	CCTyper	CDS	2075938	2076303	122	-	.	ID=SEQF9433.1|LT906445.1_1819_cas;Genome_ID=SEQF9433.1;Feature_type=CDS;Product=Cas Prediction : Csx20_1_CAS-I-III;coding_strand=-;E-value=2.9000000000000003e-58;Score=192.6;Coverage_Seq=0.9918032786885246;Coverage_Hmm=1.0