SEQF9483.1|PQNI01000069.1	CCTyper	repeat_region	9908	11167	1260	+	.	ID=SEQF9483.1|PQNI01000069.1_1;Genome_ID=SEQF9483.1;Note=Predictor:CCtyper;Start:9908;End:11167;Consensus_Repeat:GTGCTCCCCGCGTGAGCGGGGATGATCC;Number_of_Repeats:21;Repeat_Length:28;Average_Spacer_Length:33.6;Repeat_Identity:94.7;Spacer_Identity:42.3;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.968;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	9908	9935	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT1;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCTTGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	9936	9968	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER1;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CGGGTGTCTGGGCGTGGGGTCGTTCCGGTACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	9969	9996	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT2;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	9997	10029	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER2;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GGCCCGCGCCATGCACGACGACACGACCACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10030	10057	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT3;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10058	10090	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER3;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CCACCACCTCCGCCTCGCCGCCAACGTCCTCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10091	10118	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT4;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10119	10151	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER4;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CTGAGCGATGTGTTGAGCGATCCCCCGCCCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10152	10179	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT5;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10180	10212	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER5;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GCTGCAGGCGCAGGACGCTCTCCAGCTGTCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10213	10240	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT6;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10241	10273	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER6;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CCGACCATTGCGCCCACGCTGTAGTACTGCTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10274	10301	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT7;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10302	10335	34	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER7;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CCAATGAGCACTATCAACCCTGCCGATGTCTTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10336	10363	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT8;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10364	10396	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER8;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CATGGCCCGCCGGTCGCTGAAGGGGTCGGACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10397	10424	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT9;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10425	10457	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER9;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGTGGGGAGTGTGTGTGGGGGTTACCGGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10458	10485	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT10;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10486	10519	34	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER10;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CGCTATGGAGGTTGTGACGTGCCGTGTTCTGAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10520	10547	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT11;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10548	10581	34	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER11;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GGTCGCGATGAGAGTCAGCGCCCTGCAAGGTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10582	10609	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT12;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10610	10642	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER12;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GGGCGCTCGACCGAAGTTCCAGGAGTGGTCGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10643	10670	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT13;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10671	10703	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER13;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CTGGAACAGCCCATACGCCCCGGACGAGGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10704	10731	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT14;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10732	10764	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER14;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GGGGTCCACTACCAGCCACTCAGGGGGACACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10765	10792	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT15;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10793	10825	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER15;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GCATTTCCATCGTGTCGGTGAACTGCTGCCCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10826	10853	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT16;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10854	10886	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER16;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CCTCAACCACGGCGGCCCGGACGTCCCAGTCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10887	10914	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT17;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10915	10947	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER17;Parent=SEQF9483.1|PQNI01000069.1_1;Note=CATGCCAGAATCCACGCTTTACCAGCAGGTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	10948	10975	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT18;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	10976	11008	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER18;Parent=SEQF9483.1|PQNI01000069.1_1;Note=AGAGCGCCCGGACTTGTTTGGTGAGCGTCGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	11009	11036	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT19;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	11037	11078	42	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER19;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GCGGGGATGATCCGGAGAGGACACGCTAGACTGCAGAAGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	11079	11106	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT20;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCGCGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	binding_site	11107	11139	33	+	.	ID=SEQF9483.1|PQNI01000069.1_1_SPACER20;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GCGTCACGCTTGGACGACTTTGATCCGGCATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	direct_repeat	11140	11167	28	+	.	ID=SEQF9483.1|PQNI01000069.1_1_REPEAT21;Parent=SEQF9483.1|PQNI01000069.1_1;Note=GTGCTCCCCGCTGACGCGGGGATAGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9483.1|PQNI01000069.1	CCTyper	OPERON	3338	9826	6489	+	.	ID=SEQF9483.1|PQNI01000069.1@1;Genome_ID=SEQF9483.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=83%;Complete_Adaptation=100%;Best_type=I-E;Best_score=22.0;Genes=Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_2_CAS-I,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_10_CAS-I-II-III-IV-V-VI;Positions=4,5,6,7,8,9,10;E-values=2.80e-107,3.30e-37,2.20e-125,3.80e-45,1.00e-59,3.60e-104,4.60e-30;CoverageSeq=0.779,0.774,0.9,0.871,0.947,0.82,0.711;CoverageHMM=0.963,0.945,0.947,0.995,1.0,0.993,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	8469	9467	333	+	.	ID=SEQF9483.1|PQNI01000069.1_9_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=3.6000000000000004e-104;Score=344.7;Coverage_Seq=0.8198198198198198;Coverage_Hmm=0.9925650557620818
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	9464	9826	121	+	.	ID=SEQF9483.1|PQNI01000069.1_10_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.6000000000000004e-30;Score=100.6;Coverage_Seq=0.7107438016528925;Coverage_Hmm=1.0
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	7099	7797	233	+	.	ID=SEQF9483.1|PQNI01000069.1_7_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I;coding_strand=+;E-value=3.8e-45;Score=151.4;Coverage_Seq=0.871244635193133;Coverage_Hmm=0.9953051643192489
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	7798	8472	225	+	.	ID=SEQF9483.1|PQNI01000069.1_8_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1e-59;Score=199.2;Coverage_Seq=0.9466666666666667;Coverage_Hmm=1.0
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	5984	7093	370	+	.	ID=SEQF9483.1|PQNI01000069.1_6_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=2.2000000000000002e-125;Score=415.8;Coverage_Seq=0.9;Coverage_Hmm=0.947075208913649
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	3338	5155	606	+	.	ID=SEQF9483.1|PQNI01000069.1_4_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=2.8e-107;Score=356.5;Coverage_Seq=0.7788778877887789;Coverage_Hmm=0.9634408602150538
SEQF9483.1|PQNI01000069.1	CCTyper	CDS	5133	5849	239	+	.	ID=SEQF9483.1|PQNI01000069.1_5_cas;Genome_ID=SEQF9483.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=3.3000000000000002e-37;Score=125.0;Coverage_Seq=0.7740585774058577;Coverage_Hmm=0.9447236180904522