SEQF9487.1|PQNE01000018.1	CCTyper	repeat_region	15576	16274	699	+	.	ID=SEQF9487.1|PQNE01000018.1_1;Genome_ID=SEQF9487.1;Note=Predictor:CCtyper;Start:15576;End:16274;Consensus_Repeat:GTGCTCCCCGCGTGAGCGGGGATGATCC;Number_of_Repeats:12;Repeat_Length:28;Average_Spacer_Length:33;Repeat_Identity:94.8;Spacer_Identity:45.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.968;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15576	15603	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT1;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15604	15636	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER1;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CGGCTGGCACGGGTAACCACCGGTGAGAATGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15637	15664	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT2;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15665	15697	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER2;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CGCATGGTCACCCCCCGTGAGCTCCGAGCCGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15698	15725	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT3;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15726	15758	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER3;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CACAGCCCCGCTCGAGTCATGGCGGACGTACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15759	15786	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT4;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15787	15819	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER4;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GCGGCTGTGCATGACGTCAATCGCTGCGTTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15820	15847	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT5;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15848	15880	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER5;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CATCTGGGACGTCGCCGCCCGCAGATCATTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15881	15908	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT6;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTCGGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15909	15941	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER6;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CATGGTCGGCCAGGTGTGCGGTCTTCTGCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	15942	15969	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT7;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGCGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	15970	16002	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER7;Parent=SEQF9487.1|PQNE01000018.1_1;Note=TGCTTCGTTGAGTGTCGGTCCGGCAGGTGCCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	16003	16030	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT8;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	16031	16063	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER8;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CGTGGGCGTCCGGTCGGCACTGTCGACGACGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	16064	16091	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT9;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	16092	16124	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER9;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GCAATGGCAGCGGGTAGTGAAGTCGGGGGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	16125	16152	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT10;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGTGAGCGGGGAGGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	16153	16185	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER10;Parent=SEQF9487.1|PQNE01000018.1_1;Note=CGCGTCCGAGTGGGCGCGCCTCGACTCGGATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	16186	16213	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT11;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCGCGAGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	binding_site	16214	16246	33	+	.	ID=SEQF9487.1|PQNE01000018.1_1_SPACER11;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GCGTCACGCTTGGACGACTTTGATCCGGCATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	direct_repeat	16247	16274	28	+	.	ID=SEQF9487.1|PQNE01000018.1_1_REPEAT12;Parent=SEQF9487.1|PQNE01000018.1_1;Note=GTGCTCCCCGCTGACGCGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	repeat_region	5694	5948	255	+	.	ID=SEQF9487.1|PQNE01000042.1_2;Genome_ID=SEQF9487.1;Note=Predictor:CCtyper;Start:5694;End:5948;Consensus_Repeat:AAGCCGTCGGAGGAGCCCAAGCCGTCC;Number_of_Repeats:5;Repeat_Length:27;Average_Spacer_Length:30;Repeat_Identity:84.5;Spacer_Identity:61.9;Spacer_Length_Sem:3.0;Trusted:False;Cas_Type_Prediction: I-G;Cas_Subtype_Prediction:I-G;Subtype_Probability:0.83;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	direct_repeat	5694	5720	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_REPEAT1;Parent=SEQF9487.1|PQNE01000042.1_2;Note=ACTCCGTCTGAGGAGAGCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	binding_site	5721	5747	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_SPACER1;Parent=SEQF9487.1|PQNE01000042.1_2;Note=GAGGATCCCAAGCCGTCGGAGGAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	direct_repeat	5748	5774	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_REPEAT2;Parent=SEQF9487.1|PQNE01000042.1_2;Note=AAGCCGTCTGAGGAGGCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	binding_site	5775	5801	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_SPACER2;Parent=SEQF9487.1|PQNE01000042.1_2;Note=ACGGAGCCGACTCCGTCCGAGGAGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	direct_repeat	5802	5828	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_REPEAT3;Parent=SEQF9487.1|PQNE01000042.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	binding_site	5829	5855	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_SPACER3;Parent=SEQF9487.1|PQNE01000042.1_2;Note=GAGGAGGCTAAGCCGTCGGAGGAGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	direct_repeat	5856	5882	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_REPEAT4;Parent=SEQF9487.1|PQNE01000042.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	binding_site	5883	5921	39	+	.	ID=SEQF9487.1|PQNE01000042.1_2_SPACER4;Parent=SEQF9487.1|PQNE01000042.1_2;Note=ACGGAGCCGACCCCGTCCGACAAGCCGTCCGAGGAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000042.1	CCTyper	direct_repeat	5922	5948	27	+	.	ID=SEQF9487.1|PQNE01000042.1_2_REPEAT5;Parent=SEQF9487.1|PQNE01000042.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9487.1|PQNE01000018.1	CCTyper	OPERON	6168	15494	9327	+	.	ID=SEQF9487.1|PQNE01000018.1@1;Genome_ID=SEQF9487.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=24.0;Genes=Cas3_1_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_2_CAS-I,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_10_CAS-I-II-III-IV-V-VI;Positions=5,6,7,8,9,10,11,12;E-values=7.00e-63,4.00e-106,6.50e-37,1.70e-124,9.00e-46,3.70e-59,2.80e-59,1.80e-29;CoverageSeq=0.42,0.844,0.761,0.9,0.871,0.947,0.762,0.711;CoverageHMM=0.47,0.998,0.945,0.947,0.995,1.0,0.699,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	14380	15135	252	+	.	ID=SEQF9487.1|PQNE01000018.1_11_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=2.8000000000000002e-59;Score=197.6;Coverage_Seq=0.7619047619047619;Coverage_Hmm=0.6988847583643123
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	15132	15494	121	+	.	ID=SEQF9487.1|PQNE01000018.1_12_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.8e-29;Score=98.7;Coverage_Seq=0.7107438016528925;Coverage_Hmm=1.0
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	6168	8984	939	+	.	ID=SEQF9487.1|PQNE01000018.1_5_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=7e-63;Score=210.1;Coverage_Seq=0.41959531416400425;Coverage_Hmm=0.4697986577181208
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	13010	13708	233	+	.	ID=SEQF9487.1|PQNE01000018.1_9_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I;coding_strand=+;E-value=9e-46;Score=153.5;Coverage_Seq=0.871244635193133;Coverage_Hmm=0.9953051643192489
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	13709	14383	225	+	.	ID=SEQF9487.1|PQNE01000018.1_10_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.7000000000000004e-59;Score=197.5;Coverage_Seq=0.9466666666666667;Coverage_Hmm=1.0
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	11895	13004	370	+	.	ID=SEQF9487.1|PQNE01000018.1_8_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=1.7e-124;Score=412.9;Coverage_Seq=0.9;Coverage_Hmm=0.947075208913649
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	9216	11024	603	+	.	ID=SEQF9487.1|PQNE01000018.1_6_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=4e-106;Score=352.8;Coverage_Seq=0.8441127694859039;Coverage_Hmm=0.9978494623655914
SEQF9487.1|PQNE01000018.1	CCTyper	CDS	11002	11730	243	+	.	ID=SEQF9487.1|PQNE01000018.1_7_cas;Genome_ID=SEQF9487.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=6.5e-37;Score=124.2;Coverage_Seq=0.7613168724279835;Coverage_Hmm=0.9447236180904522