SEQF9488.1|PQNU01000011.1	CCTyper	repeat_region	28976	29798	823	+	.	ID=SEQF9488.1|PQNU01000011.1_1;Genome_ID=SEQF9488.1;Note=Predictor:CCtyper;Start:28976;End:29798;Consensus_Repeat:GGATCATCCCCGCTCACGCGGGGAGCAC;Number_of_Repeats:14;Repeat_Length:28;Average_Spacer_Length:33.2;Repeat_Identity:87.7;Spacer_Identity:43.0;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.968;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	28976	29003	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT1;Parent=SEQF9488.1|PQNU01000011.1_1;Note=AGGTCGTCCCCGCCCGGGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29004	29036	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER1;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GCGTTCACCCACAACGAGTGGGAGTTCTGGGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29037	29064	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT2;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCACTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29065	29097	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER2;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GCGGCGGTGCTGTTGGCGTGCTGGGGTGACGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29098	29125	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT3;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29126	29159	34	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER3;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGTATGGGGTGTCCGTACCATGTCTTCTCGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29160	29187	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT4;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGCGGAGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29188	29220	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER4;Parent=SEQF9488.1|PQNU01000011.1_1;Note=CTGTTCACCACTGGCTACGGCGGCGACGGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29221	29248	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT5;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29249	29281	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER5;Parent=SEQF9488.1|PQNU01000011.1_1;Note=TCCCCCACCGACCGTGCACAGCAGCTCGCCGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29282	29309	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT6;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29310	29343	34	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER6;Parent=SEQF9488.1|PQNU01000011.1_1;Note=CCAGTGGGGGGGAGGAACGTGACTCCGCGGGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29344	29371	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT7;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29372	29404	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER7;Parent=SEQF9488.1|PQNU01000011.1_1;Note=CCCGCCGCCCTGAACGACACGAAGCACGCCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29405	29432	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT8;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGAAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29433	29465	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER8;Parent=SEQF9488.1|PQNU01000011.1_1;Note=ACGCTCTCCAGCTGTCACAGGCGTCGGTGCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29466	29493	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT9;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29494	29526	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER9;Parent=SEQF9488.1|PQNU01000011.1_1;Note=TCGACAGTGCTCGTGTGGCGTGGCCGGAGTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29527	29554	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT10;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29555	29587	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER10;Parent=SEQF9488.1|PQNU01000011.1_1;Note=CAGGGGCGACATCGACTCGAACGCTGCCCTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29588	29615	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT11;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCGCGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29616	29648	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER11;Parent=SEQF9488.1|PQNU01000011.1_1;Note=TCCCACTACCTCGCTCCAATCGCCCCCGCCGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29649	29676	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT12;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCGCGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29677	29709	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER12;Parent=SEQF9488.1|PQNU01000011.1_1;Note=CTATGCAGAAGACCGCACACCTGGCCGACCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29710	29737	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT13;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	binding_site	29738	29770	33	+	.	ID=SEQF9488.1|PQNU01000011.1_1_SPACER13;Parent=SEQF9488.1|PQNU01000011.1_1;Note=ACGAATGATCTGCGGGCGGCGACGTCCCAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	direct_repeat	29771	29798	28	+	.	ID=SEQF9488.1|PQNU01000011.1_1_REPEAT14;Parent=SEQF9488.1|PQNU01000011.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9488.1|PQNU01000011.1	CCTyper	OPERON	30239	38980	8742	-	.	ID=SEQF9488.1|PQNU01000011.1@2;Genome_ID=SEQF9488.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=22.0;Genes=Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_2_CAS-I,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3HD_0_CAS-I;Positions=25,26,27,28,29,32,34;E-values=9.40e-54,9.10e-59,8.60e-46,3.40e-123,1.70e-36,1.50e-51,5.30e-24;CoverageSeq=0.821,0.947,0.871,0.889,0.762,0.912,0.446;CoverageHMM=0.572,1.0,0.995,0.939,0.93,0.413,0.99;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	30239	30790	184	-	.	ID=SEQF9488.1|PQNU01000011.1_25_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=9.4e-54;Score=179.4;Coverage_Seq=0.8206521739130435;Coverage_Hmm=0.5724907063197026
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	37583	38980	466	-	.	ID=SEQF9488.1|PQNU01000011.1_34_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=5.3e-24;Score=82.1;Coverage_Seq=0.44635193133047213;Coverage_Hmm=0.9901477832512315
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	31462	32160	233	-	.	ID=SEQF9488.1|PQNU01000011.1_27_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I;coding_strand=-;E-value=8.599999999999999e-46;Score=153.5;Coverage_Seq=0.871244635193133;Coverage_Hmm=0.9953051643192489
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	30787	31461	225	-	.	ID=SEQF9488.1|PQNU01000011.1_26_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9.1e-59;Score=196.1;Coverage_Seq=0.9466666666666667;Coverage_Hmm=1.0
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	32166	33275	370	-	.	ID=SEQF9488.1|PQNU01000011.1_28_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=3.4e-123;Score=408.6;Coverage_Seq=0.8891891891891892;Coverage_Hmm=0.9387186629526463
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	35294	35941	216	-	.	ID=SEQF9488.1|PQNU01000011.1_32_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=1.5e-51;Score=172.8;Coverage_Seq=0.9120370370370371;Coverage_Hmm=0.4129032258064516
SEQF9488.1|PQNU01000011.1	CCTyper	CDS	33440	34156	239	-	.	ID=SEQF9488.1|PQNU01000011.1_29_cas;Genome_ID=SEQF9488.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=1.7e-36;Score=122.7;Coverage_Seq=0.7615062761506276;Coverage_Hmm=0.9296482412060302