SEQF9493.1|PQNJ01000012.1	CCTyper	repeat_region	13221	13933	713	+	.	ID=SEQF9493.1|PQNJ01000012.1_1;Genome_ID=SEQF9493.1;Note=Predictor:CCtyper;Start:13221;End:13933;Consensus_Repeat:GGATCATCCCCGCTCACGCGGGGAGCAC;Number_of_Repeats:12;Repeat_Length:28;Average_Spacer_Length:34.3;Repeat_Identity:89.7;Spacer_Identity:46.0;Spacer_Length_Sem:1.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.968;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13221	13248	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT1;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=AGGTCGTCCCCGCTCGCGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13249	13295	47	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER1;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GTTGACACCACCGACCAGCGCGCCGATGACCTGCGGATCATCCCCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13296	13323	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT2;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGCTCATCCCCGTTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13324	13356	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER2;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=CACAACACCCTCAAGGAAGGACACCACCAACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13357	13384	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT3;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCGCGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13385	13417	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER3;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=AAATCCGAGTCGAGGCGCGCCCACTCGGACGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13418	13445	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT4;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCCTCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13446	13478	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER4;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=TCAACCCCCGACTTCACTACCCGCTGCCATTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13479	13506	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT5;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13507	13539	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER5;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=CCCGTCGTCGACAGTGCCGACCGGACGCCCACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13540	13567	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT6;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13568	13600	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER6;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=CAGGCACCTGCCGGACCGACACTCAACGAAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13601	13628	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT7;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCGCGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13629	13661	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER7;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=CTATGCAGAAGACCGCACACCTGGCCGACCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13662	13689	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT8;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCCGACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13690	13722	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER8;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=ACGAATGATCTGCGGGCGGCGACGTCCCAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13723	13750	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT9;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGACCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13751	13783	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER9;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=ATGAACGCAGCGATTGACGTCATGCACAGCCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13784	13811	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT10;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13812	13844	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER10;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GCGTACGTCCGCCATGACTCGAGCGGGGCTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13845	13872	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT11;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	binding_site	13873	13905	33	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_SPACER11;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GACATTCTCACCGGTGGTTACCCGTGCCAGCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	direct_repeat	13906	13933	28	+	.	ID=SEQF9493.1|PQNJ01000012.1_1_REPEAT12;Parent=SEQF9493.1|PQNJ01000012.1_1;Note=GGATCATCCCCGCTCACGCGGGGAGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	repeat_region	7449	7703	255	+	.	ID=SEQF9493.1|PQNJ01000045.1_2;Genome_ID=SEQF9493.1;Note=Predictor:CCtyper;Start:7449;End:7703;Consensus_Repeat:AAGCCGTCGGAGGAGCCCAAGCCGTCC;Number_of_Repeats:5;Repeat_Length:27;Average_Spacer_Length:30.0;Repeat_Identity:84.5;Spacer_Identity:61.9;Spacer_Length_Sem:3.0;Trusted:False;Cas_Type_Prediction: I-G;Cas_Subtype_Prediction:I-G;Subtype_Probability:0.83;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	direct_repeat	7449	7475	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_REPEAT1;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=ACTCCGTCTGAGGAGAGCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	binding_site	7476	7502	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_SPACER1;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=GAGGATCCCAAGCCGTCGGAGGAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	direct_repeat	7503	7529	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_REPEAT2;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=AAGCCGTCTGAGGAGGCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	binding_site	7530	7556	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_SPACER2;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=ACGGAGCCGACTCCGTCCGAGGAGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	direct_repeat	7557	7583	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_REPEAT3;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	binding_site	7584	7610	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_SPACER3;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=GAGGAGGCTAAGCCGTCGGAGGAGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	direct_repeat	7611	7637	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_REPEAT4;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	binding_site	7638	7676	39	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_SPACER4;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=ACGGAGCCGACCCCGTCCGACAAGCCGTCCGAGGAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000045.1	CCTyper	direct_repeat	7677	7703	27	+	.	ID=SEQF9493.1|PQNJ01000045.1_2_REPEAT5;Parent=SEQF9493.1|PQNJ01000045.1_2;Note=AAGCCGTCGGAGGAGCCCAAGCCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9493.1|PQNJ01000012.1	CCTyper	OPERON	14015	23345	9331	-	.	ID=SEQF9493.1|PQNJ01000012.1@1;Genome_ID=SEQF9493.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=24.0;Genes=Cas2_10_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_2_CAS-I,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_1_CAS-I;Positions=11,12,13,14,15,16,17,18;E-values=1.70e-29,2.70e-59,3.50e-59,8.60e-46,1.70e-124,6.20e-37,3.80e-105,6.70e-63;CoverageSeq=0.711,0.762,0.951,0.871,0.9,0.761,0.844,0.42;CoverageHMM=1.0,0.699,1.0,0.995,0.947,0.945,0.998,0.47;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	14374	15129	252	-	.	ID=SEQF9493.1|PQNJ01000012.1_12_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=2.7000000000000003e-59;Score=197.6;Coverage_Seq=0.7619047619047619;Coverage_Hmm=0.6988847583643123
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	14015	14377	121	-	.	ID=SEQF9493.1|PQNJ01000012.1_11_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.7e-29;Score=98.7;Coverage_Seq=0.7107438016528925;Coverage_Hmm=1.0
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	20529	23345	939	-	.	ID=SEQF9493.1|PQNJ01000012.1_18_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=6.7e-63;Score=210.1;Coverage_Seq=0.41959531416400425;Coverage_Hmm=0.4697986577181208
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	15805	16503	233	-	.	ID=SEQF9493.1|PQNJ01000012.1_14_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I;coding_strand=-;E-value=8.599999999999999e-46;Score=153.5;Coverage_Seq=0.871244635193133;Coverage_Hmm=0.9953051643192489
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	15133	15804	224	-	.	ID=SEQF9493.1|PQNJ01000012.1_13_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-59;Score=197.5;Coverage_Seq=0.9508928571428571;Coverage_Hmm=1.0
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	16509	17618	370	-	.	ID=SEQF9493.1|PQNJ01000012.1_15_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1.7e-124;Score=412.9;Coverage_Seq=0.9;Coverage_Hmm=0.947075208913649
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	18489	20297	603	-	.	ID=SEQF9493.1|PQNJ01000012.1_17_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=3.8e-105;Score=349.5;Coverage_Seq=0.8441127694859039;Coverage_Hmm=0.9978494623655914
SEQF9493.1|PQNJ01000012.1	CCTyper	CDS	17783	18511	243	-	.	ID=SEQF9493.1|PQNJ01000012.1_16_cas;Genome_ID=SEQF9493.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=6.2e-37;Score=124.2;Coverage_Seq=0.7613168724279835;Coverage_Hmm=0.9447236180904522