SEQF9525.1|CTEM01000007.1	CCTyper	repeat_region	69337	69729	393	+	.	ID=SEQF9525.1|CTEM01000007.1_1;Genome_ID=SEQF9525.1;Note=Predictor:CCtyper;Start:69337;End:69729;Consensus_Repeat:TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Number_of_Repeats:6;Repeat_Length:37;Average_Spacer_Length:34.2;Repeat_Identity:98.2;Spacer_Identity:44.2;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.997;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69337	69373	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT1;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	binding_site	69374	69409	36	+	.	ID=SEQF9525.1|CTEM01000007.1_1_SPACER1;Parent=SEQF9525.1|CTEM01000007.1_1;Note=CTAGATACCCAGAACAAAATAGGTCTAACGAAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69410	69446	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT2;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	binding_site	69447	69480	34	+	.	ID=SEQF9525.1|CTEM01000007.1_1_SPACER2;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TACTACCGCCACAAATTCTAGTGATTTTATTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69481	69517	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT3;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	binding_site	69518	69552	35	+	.	ID=SEQF9525.1|CTEM01000007.1_1_SPACER3;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TCTATAAGTTCATTAATTCCGATACCTAGATTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69553	69589	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT4;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	binding_site	69590	69622	33	+	.	ID=SEQF9525.1|CTEM01000007.1_1_SPACER4;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TTTTTTCCACCCTTTCAGATCATCTATGATCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69623	69659	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT5;Parent=SEQF9525.1|CTEM01000007.1_1;Note=GGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	binding_site	69660	69692	33	+	.	ID=SEQF9525.1|CTEM01000007.1_1_SPACER5;Parent=SEQF9525.1|CTEM01000007.1_1;Note=AATTTTCTAATTCTATAAGTTCATTAATTCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000007.1	CCTyper	direct_repeat	69693	69729	37	+	.	ID=SEQF9525.1|CTEM01000007.1_1_REPEAT6;Parent=SEQF9525.1|CTEM01000007.1_1;Note=TGATCGATAACTACCCCGAATAACAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	repeat_region	4	249	246	+	.	ID=SEQF9525.1|CTEM01000010.1_2;Genome_ID=SEQF9525.1;Note=Predictor:CCtyper;Start:4;End:249;Consensus_Repeat:GATCGATAACTACCCCGAATAACAGGGGACGAGAA;Number_of_Repeats:4;Repeat_Length:35;Average_Spacer_Length:35.3;Repeat_Identity:92.1;Spacer_Identity:44.2;Spacer_Length_Sem:0.7;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	4	38	35	+	.	ID=SEQF9525.1|CTEM01000010.1_2_REPEAT1;Parent=SEQF9525.1|CTEM01000010.1_2;Note=GATCGATAACTACCCCGAATAACAGGGGACGAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	39	74	36	+	.	ID=SEQF9525.1|CTEM01000010.1_2_SPACER1;Parent=SEQF9525.1|CTEM01000010.1_2;Note=TAAGTTAACGGCATTACCTAATAAAAATATTTTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	75	109	35	+	.	ID=SEQF9525.1|CTEM01000010.1_2_REPEAT2;Parent=SEQF9525.1|CTEM01000010.1_2;Note=GATCGATAACTACCCCGAATAACAGGGGACGAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	110	143	34	+	.	ID=SEQF9525.1|CTEM01000010.1_2_SPACER2;Parent=SEQF9525.1|CTEM01000010.1_2;Note=CTCATCTTTCATGTCACTGATTAATTCATTTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	144	178	35	+	.	ID=SEQF9525.1|CTEM01000010.1_2_REPEAT3;Parent=SEQF9525.1|CTEM01000010.1_2;Note=GATCGATAACTACCCCGAATAACAGGGGACGAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	179	214	36	+	.	ID=SEQF9525.1|CTEM01000010.1_2_SPACER3;Parent=SEQF9525.1|CTEM01000010.1_2;Note=CGGTAATAGTTGCTCAATAGGTAATAAAACGTCGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	215	249	35	+	.	ID=SEQF9525.1|CTEM01000010.1_2_REPEAT4;Parent=SEQF9525.1|CTEM01000010.1_2;Note=GATCGATAACTATCCCGAATAACAGGGGACAGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	repeat_region	8973	9220	248	+	.	ID=SEQF9525.1|CTEM01000010.1_3;Genome_ID=SEQF9525.1;Note=Predictor:CCtyper;Start:8973;End:9220;Consensus_Repeat:ATTCGATAACTACCCCGTAGAAGAGGGGACGAG;Number_of_Repeats:4;Repeat_Length:33;Average_Spacer_Length:38.7;Repeat_Identity:97.1;Spacer_Identity:48.9;Spacer_Length_Sem:1.8;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	8973	9005	33	+	.	ID=SEQF9525.1|CTEM01000010.1_3_REPEAT1;Parent=SEQF9525.1|CTEM01000010.1_3;Note=ATTCGATAACTACCCCGTAGAAGAGGGGACGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	9006	9043	38	+	.	ID=SEQF9525.1|CTEM01000010.1_3_SPACER1;Parent=SEQF9525.1|CTEM01000010.1_3;Note=AACTCTTCTAAGACGCGATATGATTCTAATTGGTCTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	9044	9076	33	+	.	ID=SEQF9525.1|CTEM01000010.1_3_REPEAT2;Parent=SEQF9525.1|CTEM01000010.1_3;Note=ATTCGATAACTACCCCCGTAGAAGAGGGGACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	9077	9118	42	+	.	ID=SEQF9525.1|CTEM01000010.1_3_SPACER2;Parent=SEQF9525.1|CTEM01000010.1_3;Note=GAACTGATATACTCCTTTACCATGTATTAATTCTGGACCACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	9119	9151	33	+	.	ID=SEQF9525.1|CTEM01000010.1_3_REPEAT3;Parent=SEQF9525.1|CTEM01000010.1_3;Note=ATTCGATAACTACCCCGTAGAAGAGGGGACGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	binding_site	9152	9187	36	+	.	ID=SEQF9525.1|CTEM01000010.1_3_SPACER3;Parent=SEQF9525.1|CTEM01000010.1_3;Note=AACTCATATTCGATCGTGTATATCAAAACTTTATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	direct_repeat	9188	9220	33	+	.	ID=SEQF9525.1|CTEM01000010.1_3_REPEAT4;Parent=SEQF9525.1|CTEM01000010.1_3;Note=ATTCGATAACTACCCCGTAGAAGAGGGGACGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9525.1|CTEM01000010.1	CCTyper	OPERON	324	8838	8515	+	.	ID=SEQF9525.1|CTEM01000010.1@1;Genome_ID=SEQF9525.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_0_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_0_IIIA,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=1,2,3,4,5,6,7,8,9;E-values=6.30e-95,7.20e-26,8.90e-212,3.40e-25,6.50e-84,1.50e-51,2.00e-29,1.20e-131,8.00e-27;CoverageSeq=0.917,0.892,0.844,0.676,0.953,0.993,0.827,0.849,0.816;CoverageHMM=0.996,0.967,0.998,1.0,0.991,0.978,0.732,0.994,0.99;Strand_Interference=1;Strand_Adaptation=NA
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	1548	3821	758	+	.	ID=SEQF9525.1|CTEM01000010.1_3_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=8.9e-212;Score=702.3;Coverage_Seq=0.8443271767810027;Coverage_Hmm=0.9984709480122325
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	324	1229	302	+	.	ID=SEQF9525.1|CTEM01000010.1_1_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.3e-95;Score=314.6;Coverage_Seq=0.9172185430463576;Coverage_Hmm=0.9963636363636363
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	1229	1534	102	+	.	ID=SEQF9525.1|CTEM01000010.1_2_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.2e-26;Score=87.6;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.9666666666666667
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	8104	8838	245	+	.	ID=SEQF9525.1|CTEM01000010.1_9_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8e-27;Score=92.0;Coverage_Seq=0.8163265306122449;Coverage_Hmm=0.9896907216494846
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	3824	4249	142	+	.	ID=SEQF9525.1|CTEM01000010.1_4_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=+;E-value=3.4e-25;Score=85.9;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	4251	4895	215	+	.	ID=SEQF9525.1|CTEM01000010.1_5_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=6.5e-84;Score=278.1;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	4906	5814	303	+	.	ID=SEQF9525.1|CTEM01000010.1_6_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=1.5e-51;Score=172.6;Coverage_Seq=0.9933993399339934;Coverage_Hmm=0.9777777777777777
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	5817	6839	341	+	.	ID=SEQF9525.1|CTEM01000010.1_7_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=2.0000000000000002e-29;Score=100.1;Coverage_Seq=0.8269794721407625;Coverage_Hmm=0.7315068493150685
SEQF9525.1|CTEM01000010.1	CCTyper	CDS	6839	8107	423	+	.	ID=SEQF9525.1|CTEM01000010.1_8_cas;Genome_ID=SEQF9525.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=+;E-value=1.2e-131;Score=436.1;Coverage_Seq=0.8486997635933806;Coverage_Hmm=0.994475138121547