SEQF9536.1|JADOYK010000008.1	CCTyper	repeat_region	50369	50620	252	+	.	ID=SEQF9536.1|JADOYK010000008.1_1;Genome_ID=SEQF9536.1;Note=Predictor:CCtyper;Start:50369;End:50620;Consensus_Repeat:AGTTCTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Number_of_Repeats:4;Repeat_Length:37;Average_Spacer_Length:34.7;Repeat_Identity:92.3;Spacer_Identity:45.5;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	50369	50405	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_REPEAT1;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=GATCCTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	50406	50437	32	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_SPACER1;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=GCATAAAGTTTTGATATACACGATCGAATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	50438	50474	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_REPEAT2;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=AGTTCTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	50475	50511	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_SPACER2;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=AGTGGTCCAGAATTAATACATGGTAAAGGAGTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	50512	50548	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_REPEAT3;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=AGTTCTCGTCCCCTCTTCTACGGGGGTAGTTATCGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	50549	50583	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_SPACER3;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=TGAAGACCAATTAGAATCATATCGCGTCTTAGAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	50584	50620	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_1_REPEAT4;Parent=SEQF9536.1|JADOYK010000008.1_1;Note=AGTTCTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	repeat_region	59343	60164	822	+	.	ID=SEQF9536.1|JADOYK010000008.1_2;Genome_ID=SEQF9536.1;Note=Predictor:CCtyper;Start:59343;End:60164;Consensus_Repeat:ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Number_of_Repeats:12;Repeat_Length:36;Average_Spacer_Length:35.5;Repeat_Identity:95.9;Spacer_Identity:44.7;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59343	59378	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT1;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=CACTCTGTCCCCTGTTATTCGGGATAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59379	59413	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER1;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ACCGACGTTTTATTACCTATTGAGCAACTATTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59414	59449	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT2;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=GTTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59450	59482	33	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER2;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=TACAAATGAATTAATCAGTGACATGAAAGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59483	59518	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT3;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=GTTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59519	59553	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER3;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=CCTAAAATATTTTTATTAGGTAATGCCGTTAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59554	59589	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT4;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59590	59625	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER4;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=TAGAAAAAAGGAGGGTGTTATTCATGGAAGAAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59626	59661	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT5;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59662	59697	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER5;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=TGATGTAAGAGAAATGATGAAAGATGACGAAGTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59698	59733	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT6;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59734	59768	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER6;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=CAAGAATTTAAAGATAACGAATTGAACGGGTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59769	59804	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT7;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59805	59839	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER7;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ACTATTAAATGGGCAGTAAAAACAGTTAAAGAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59840	59875	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT8;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59876	59912	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER8;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=TAATAAAGACTATAAATATAATGAGGTAAATGGTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59913	59948	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT9;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	59949	59984	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER9;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=AGATAATCTAGGTATCGGAATTAATGAACTTATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	59985	60020	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT10;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	60021	60055	35	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER10;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=AGTAAATAAAATCACTAGAATTTGTGGCGGTAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	60056	60091	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT11;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	binding_site	60092	60128	37	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_SPACER11;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTGTTTCGTTAGACCTATTTTGTTCTGGGTATCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	direct_repeat	60129	60164	36	+	.	ID=SEQF9536.1|JADOYK010000008.1_2_REPEAT12;Parent=SEQF9536.1|JADOYK010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9536.1|JADOYK010000008.1	CCTyper	OPERON	50755	59269	8515	-	.	ID=SEQF9536.1|JADOYK010000008.1@2;Genome_ID=SEQF9536.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Csm6_0_IIIA,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_0_CAS-III-A,Cas10_1_CAS-III,Cas2_0_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI;Positions=44,45,46,47,48,49,50,51,52;E-values=4.30e-26,1.20e-131,2.00e-29,1.50e-51,6.50e-84,3.40e-25,8.80e-212,7.20e-26,6.30e-95;CoverageSeq=0.816,0.849,0.827,0.993,0.953,0.676,0.844,0.892,0.917;CoverageHMM=0.99,0.994,0.732,0.978,0.991,1.0,0.998,0.967,0.996;Strand_Interference=-1;Strand_Adaptation=NA
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	55772	58045	758	-	.	ID=SEQF9536.1|JADOYK010000008.1_50_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=8.8e-212;Score=702.3;Coverage_Seq=0.8443271767810027;Coverage_Hmm=0.9984709480122325
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	58364	59269	302	-	.	ID=SEQF9536.1|JADOYK010000008.1_52_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.3e-95;Score=314.6;Coverage_Seq=0.9172185430463576;Coverage_Hmm=0.9963636363636363
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	58059	58364	102	-	.	ID=SEQF9536.1|JADOYK010000008.1_51_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.2e-26;Score=87.6;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.9666666666666667
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	50755	51489	245	-	.	ID=SEQF9536.1|JADOYK010000008.1_44_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.3e-26;Score=89.6;Coverage_Seq=0.8163265306122449;Coverage_Hmm=0.9896907216494846
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	55344	55769	142	-	.	ID=SEQF9536.1|JADOYK010000008.1_49_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=-;E-value=3.4e-25;Score=85.9;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	54698	55342	215	-	.	ID=SEQF9536.1|JADOYK010000008.1_48_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=6.5e-84;Score=278.1;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	53779	54687	303	-	.	ID=SEQF9536.1|JADOYK010000008.1_47_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=1.5e-51;Score=172.6;Coverage_Seq=0.9933993399339934;Coverage_Hmm=0.9777777777777777
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	52754	53776	341	-	.	ID=SEQF9536.1|JADOYK010000008.1_46_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=2.0000000000000002e-29;Score=100.1;Coverage_Seq=0.8269794721407625;Coverage_Hmm=0.7315068493150685
SEQF9536.1|JADOYK010000008.1	CCTyper	CDS	51486	52754	423	-	.	ID=SEQF9536.1|JADOYK010000008.1_45_cas;Genome_ID=SEQF9536.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=-;E-value=1.2e-131;Score=436.1;Coverage_Seq=0.8486997635933806;Coverage_Hmm=0.994475138121547