SEQF9557.1|JADOYF010000008.1	CCTyper	repeat_region	50283	50458	176	+	.	ID=SEQF9557.1|JADOYF010000008.1_1;Genome_ID=SEQF9557.1;Note=Predictor:CCtyper;Start:50283;End:50458;Consensus_Repeat:CTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Number_of_Repeats:3;Repeat_Length:33;Average_Spacer_Length:38.5;Repeat_Identity:100.0;Spacer_Identity:48.1;Spacer_Length_Sem:2.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	50283	50315	33	+	.	ID=SEQF9557.1|JADOYF010000008.1_1_REPEAT1;Parent=SEQF9557.1|JADOYF010000008.1_1;Note=CTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	50316	50351	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_1_SPACER1;Parent=SEQF9557.1|JADOYF010000008.1_1;Note=GCATAAAGTTTTGATATACACGATCGAATATGAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	50352	50384	33	+	.	ID=SEQF9557.1|JADOYF010000008.1_1_REPEAT2;Parent=SEQF9557.1|JADOYF010000008.1_1;Note=CTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	50385	50425	41	+	.	ID=SEQF9557.1|JADOYF010000008.1_1_SPACER2;Parent=SEQF9557.1|JADOYF010000008.1_1;Note=AGTGGTCCAGAATTAATACATGGTAAAGGAGTATATCAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	50426	50458	33	+	.	ID=SEQF9557.1|JADOYF010000008.1_1_REPEAT3;Parent=SEQF9557.1|JADOYF010000008.1_1;Note=CTCGTCCCCTCTTCTACGGGGTAGTTATCGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	repeat_region	59181	60070	890	+	.	ID=SEQF9557.1|JADOYF010000008.1_2;Genome_ID=SEQF9557.1;Note=Predictor:CCtyper;Start:59181;End:60070;Consensus_Repeat:ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:35.2;Repeat_Identity:96.9;Spacer_Identity:44.0;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59181	59216	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT1;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=CACTCTGTCCCCTGTTATTCGGGATAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59217	59251	35	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER1;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ACCGACGTTTTATTACCTATTGAGCAACTATTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59252	59287	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT2;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=GTTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59288	59320	33	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER2;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=TACAAATGAATTAATCAGTGACATGAAAGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59321	59356	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT3;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=GTTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59357	59391	35	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER3;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=CCTAAAATATTTTTATTAGGTAATGCCGTTAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59392	59427	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT4;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59428	59463	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER4;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=TAGAAAAAAGGAGGGTGTTATTCATGGAAGAAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59464	59499	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT5;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59500	59533	34	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER5;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=GGAATACATCGACCACTTAGATAATAACATTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59534	59569	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT6;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59570	59606	37	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER6;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ACAGGATTGTATCTTTTAATAGAGAACAACACTATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59607	59642	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT7;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59643	59678	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER7;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=GTAGACAGACACATAAAAAATTATGTAAATAGTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59679	59714	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT8;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59715	59748	34	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER8;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATCGGAATTAATGAACTTATAGAATTAGAAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59749	59784	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT9;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59785	59818	34	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER9;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=CAAGATCATAGATGATCTGAAAGGGTGGAAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59819	59854	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT10;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59855	59890	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER10;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=AGATAATCTAGGTATCGGAATTAATGAACTTATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59891	59926	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT11;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59927	59961	35	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER11;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=AGTAAATAAAATCACTAGAATTTGTGGCGGTAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	59962	59997	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT12;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	binding_site	59998	60034	37	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_SPACER12;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTGTTTCGTTAGACCTATTTTGTTCTGGGTATCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	direct_repeat	60035	60070	36	+	.	ID=SEQF9557.1|JADOYF010000008.1_2_REPEAT13;Parent=SEQF9557.1|JADOYF010000008.1_2;Note=ATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9557.1|JADOYF010000008.1	CCTyper	OPERON	50593	59107	8515	-	.	ID=SEQF9557.1|JADOYF010000008.1@2;Genome_ID=SEQF9557.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Csm6_0_IIIA,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_0_CAS-III-A,Cas10_1_CAS-III,Cas2_0_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI;Positions=44,45,46,47,48,49,50,51,52;E-values=4.50e-26,1.20e-131,2.00e-29,1.60e-51,6.60e-84,3.50e-25,9.10e-212,7.40e-26,6.50e-95;CoverageSeq=0.816,0.849,0.827,0.993,0.953,0.676,0.844,0.892,0.917;CoverageHMM=0.99,0.994,0.732,0.978,0.991,1.0,0.998,0.967,0.996;Strand_Interference=-1;Strand_Adaptation=NA
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	55610	57883	758	-	.	ID=SEQF9557.1|JADOYF010000008.1_50_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=9.1e-212;Score=702.3;Coverage_Seq=0.8443271767810027;Coverage_Hmm=0.9984709480122325
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	58202	59107	302	-	.	ID=SEQF9557.1|JADOYF010000008.1_52_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.5e-95;Score=314.6;Coverage_Seq=0.9172185430463576;Coverage_Hmm=0.9963636363636363
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	57897	58202	102	-	.	ID=SEQF9557.1|JADOYF010000008.1_51_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.4e-26;Score=87.6;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.9666666666666667
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	50593	51327	245	-	.	ID=SEQF9557.1|JADOYF010000008.1_44_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.5e-26;Score=89.6;Coverage_Seq=0.8163265306122449;Coverage_Hmm=0.9896907216494846
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	55182	55607	142	-	.	ID=SEQF9557.1|JADOYF010000008.1_49_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=-;E-value=3.4999999999999997e-25;Score=85.9;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	54536	55180	215	-	.	ID=SEQF9557.1|JADOYF010000008.1_48_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=6.6e-84;Score=278.1;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	53617	54525	303	-	.	ID=SEQF9557.1|JADOYF010000008.1_47_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=1.6e-51;Score=172.6;Coverage_Seq=0.9933993399339934;Coverage_Hmm=0.9777777777777777
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	52592	53614	341	-	.	ID=SEQF9557.1|JADOYF010000008.1_46_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=2.0000000000000002e-29;Score=100.1;Coverage_Seq=0.8269794721407625;Coverage_Hmm=0.7315068493150685
SEQF9557.1|JADOYF010000008.1	CCTyper	CDS	51324	52592	423	-	.	ID=SEQF9557.1|JADOYF010000008.1_45_cas;Genome_ID=SEQF9557.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=-;E-value=1.2e-131;Score=436.1;Coverage_Seq=0.8486997635933806;Coverage_Hmm=0.994475138121547