SEQF9582.1|LR134291.1	CCTyper	repeat_region	1422315	1424067	1753	+	.	ID=SEQF9582.1|LR134291.1_1;Genome_ID=SEQF9582.1;Note=Predictor:CCtyper;Start:1422315;End:1424067;Consensus_Repeat:GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:27;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:94.3;Spacer_Identity:40.0;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422315	1422350	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT1;Parent=SEQF9582.1|LR134291.1_1;Note=CCTAATCACTCACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422351	1422380	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER1;Parent=SEQF9582.1|LR134291.1_1;Note=TGAACTGCTTAGACTTCATGTCTACAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422381	1422416	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT2;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422417	1422447	31	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER2;Parent=SEQF9582.1|LR134291.1_1;Note=CCATTTGATGTGATTGTGCTTGAAGGTCCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422448	1422483	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT3;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422484	1422513	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER3;Parent=SEQF9582.1|LR134291.1_1;Note=ACAAAGAAACAAAAACCATGAATGGAATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422514	1422549	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT4;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422550	1422579	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER4;Parent=SEQF9582.1|LR134291.1_1;Note=AAGGTCGATGGAATAGGTAGGAGAGGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422580	1422615	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT5;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422616	1422645	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER5;Parent=SEQF9582.1|LR134291.1_1;Note=TTTTAAATAATCGGGCATACTATCACCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422646	1422681	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT6;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422682	1422711	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER6;Parent=SEQF9582.1|LR134291.1_1;Note=GATACTCGAAGCCATCAATATACATATGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422712	1422747	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT7;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422748	1422777	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER7;Parent=SEQF9582.1|LR134291.1_1;Note=ACAAAGAAGAATACAACAACTTTGTGAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422778	1422813	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT8;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422814	1422843	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER8;Parent=SEQF9582.1|LR134291.1_1;Note=CAAGTCCGAGGTCAGATTCAAGGGTTTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422844	1422879	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT9;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422880	1422908	29	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER9;Parent=SEQF9582.1|LR134291.1_1;Note=CGAGGAAGTCAAAGCGGTTACCGTTTACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422909	1422944	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT10;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1422945	1422975	31	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER10;Parent=SEQF9582.1|LR134291.1_1;Note=CACTACTACTACTGTAGACCCTCAAACAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1422976	1423011	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT11;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423012	1423041	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER11;Parent=SEQF9582.1|LR134291.1_1;Note=TATCAACGCTATCTTACTTGATGATATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423042	1423077	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT12;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423078	1423107	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER12;Parent=SEQF9582.1|LR134291.1_1;Note=TTATGGTTCTAGTATAGCATGGTAAGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423108	1423143	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT13;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423144	1423173	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER13;Parent=SEQF9582.1|LR134291.1_1;Note=ATTTACGCATAAAATGTAAAATGGATTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423174	1423209	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT14;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423210	1423239	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER14;Parent=SEQF9582.1|LR134291.1_1;Note=ACAATTTATTATCACCTTTAAAACATATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423240	1423275	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT15;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423276	1423305	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER15;Parent=SEQF9582.1|LR134291.1_1;Note=AGATTGCTTGTAATAATCGTACAATTACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423306	1423341	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT16;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423342	1423371	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER16;Parent=SEQF9582.1|LR134291.1_1;Note=TAATCGTAACATAAAATACCAAACCTACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423372	1423407	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT17;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423408	1423437	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER17;Parent=SEQF9582.1|LR134291.1_1;Note=AATGAAATGAGCAGGCCACTTTCTAGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423438	1423473	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT18;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423474	1423503	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER18;Parent=SEQF9582.1|LR134291.1_1;Note=GACCAGGAGATGGCAGAAAAACGCTGGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423504	1423539	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT19;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423540	1423569	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER19;Parent=SEQF9582.1|LR134291.1_1;Note=CCCGCTGTTGCAGAGTGTAGTGACGTACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423570	1423605	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT20;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423606	1423635	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER20;Parent=SEQF9582.1|LR134291.1_1;Note=CAACCTAGAAGAAGGTCACGACTACCCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423636	1423671	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT21;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423672	1423701	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER21;Parent=SEQF9582.1|LR134291.1_1;Note=CTGCCATCATCTCATCTACATCAATAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423702	1423737	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT22;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423738	1423767	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER22;Parent=SEQF9582.1|LR134291.1_1;Note=GCATTTCGTTAGCTTGCTCTTGATAGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423768	1423803	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT23;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423804	1423833	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER23;Parent=SEQF9582.1|LR134291.1_1;Note=TCGGGACTAAATTTGAAGGCTATCTGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423834	1423869	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT24;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423870	1423899	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER24;Parent=SEQF9582.1|LR134291.1_1;Note=AGAGTCGTTTCAATTCGCTTTGCTCAAGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423900	1423935	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT25;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1423936	1423965	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER25;Parent=SEQF9582.1|LR134291.1_1;Note=ATACGGTGAAGGTGAAGTTGATAAAGCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1423966	1424001	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT26;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	binding_site	1424002	1424031	30	+	.	ID=SEQF9582.1|LR134291.1_1_SPACER26;Parent=SEQF9582.1|LR134291.1_1;Note=TGTGACTTATGTACGACCAGATGACAATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	direct_repeat	1424032	1424067	36	+	.	ID=SEQF9582.1|LR134291.1_1_REPEAT27;Parent=SEQF9582.1|LR134291.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9582.1|LR134291.1	CCTyper	OPERON	1424137	1429995	5859	-	.	ID=SEQF9582.1|LR134291.1@39;Genome_ID=SEQF9582.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1341,1342,1343,1344;E-values=2.20e-142,8.40e-32,3.30e-98,1.70e-232;CoverageSeq=0.994,0.954,0.896,0.713;CoverageHMM=1.0,0.888,0.996,0.98;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9582.1|LR134291.1	CCTyper	CDS	1425490	1426413	308	-	.	ID=SEQF9582.1|LR134291.1_1343_cas;Genome_ID=SEQF9582.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.3e-98;Score=325.1;Coverage_Seq=0.8961038961038961;Coverage_Hmm=0.9963636363636363
SEQF9582.1|LR134291.1	CCTyper	CDS	1425177	1425500	108	-	.	ID=SEQF9582.1|LR134291.1_1342_cas;Genome_ID=SEQF9582.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.400000000000001e-32;Score=106.8;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF9582.1|LR134291.1	CCTyper	CDS	1426585	1429995	1137	-	.	ID=SEQF9582.1|LR134291.1_1344_cas;Genome_ID=SEQF9582.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.7e-232;Score=771.1;Coverage_Seq=0.7132805628847845;Coverage_Hmm=0.9795180722891567
SEQF9582.1|LR134291.1	CCTyper	CDS	1424137	1425180	348	-	.	ID=SEQF9582.1|LR134291.1_1341_cas;Genome_ID=SEQF9582.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=2.1999999999999998e-142;Score=470.9;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0