SEQF9584.2|CP017295.1	CCTyper	repeat_region	1619972	1620863	892	+	.	ID=SEQF9584.2|CP017295.1_1;Genome_ID=SEQF9584.2;Note=Predictor:CCtyper;Start:1619972;End:1620863;Consensus_Repeat:GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:14;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:95.1;Spacer_Identity:40.6;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1619972	1620007	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT1;Parent=SEQF9584.2|CP017295.1_1;Note=CTTAATTACTCACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620008	1620038	31	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER1;Parent=SEQF9584.2|CP017295.1_1;Note=CAGGGGCGATAAAATGCCCACGTAGGGCGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620039	1620074	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT2;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620075	1620104	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER2;Parent=SEQF9584.2|CP017295.1_1;Note=TGAGGCGTAACGTCAATAGGTTGTGACTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620105	1620140	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT3;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620141	1620170	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER3;Parent=SEQF9584.2|CP017295.1_1;Note=CGCATCTCATCCTTGTGACTCTCTACGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620171	1620206	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT4;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620207	1620235	29	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER4;Parent=SEQF9584.2|CP017295.1_1;Note=ATAAAGCTCAAGAAGTCAACTCTAATAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620236	1620271	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT5;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620272	1620301	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER5;Parent=SEQF9584.2|CP017295.1_1;Note=ACCCGAGCAATTGAAGGTTATCCACAATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620302	1620337	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT6;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620338	1620366	29	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER6;Parent=SEQF9584.2|CP017295.1_1;Note=ATGATGTAAAATAATGGCATTTTCTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620367	1620402	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT7;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620403	1620431	29	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER7;Parent=SEQF9584.2|CP017295.1_1;Note=TAGCCTGAAAGAGAAAAGACACTTTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620432	1620467	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT8;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620468	1620497	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER8;Parent=SEQF9584.2|CP017295.1_1;Note=TATCCATTTTAAGCGACTTGATGCGCTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620498	1620533	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT9;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620534	1620563	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER9;Parent=SEQF9584.2|CP017295.1_1;Note=TGGTAAAAGATATTTTTGCAGTTGTGATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620564	1620599	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT10;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620600	1620629	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER10;Parent=SEQF9584.2|CP017295.1_1;Note=CGTTTGATTGGAGGTGAGGATGTGCGAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620630	1620665	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT11;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620666	1620695	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER11;Parent=SEQF9584.2|CP017295.1_1;Note=CAACAGAAGAACACAACAACACAGGATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620696	1620731	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT12;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620732	1620761	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER12;Parent=SEQF9584.2|CP017295.1_1;Note=CAATGCGATAGATTGATATTCCCTGATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620762	1620797	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT13;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	binding_site	1620798	1620827	30	+	.	ID=SEQF9584.2|CP017295.1_1_SPACER13;Parent=SEQF9584.2|CP017295.1_1;Note=CAAGCTCGTTTCTTGTGTGGTGTCCTATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	direct_repeat	1620828	1620863	36	+	.	ID=SEQF9584.2|CP017295.1_1_REPEAT14;Parent=SEQF9584.2|CP017295.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9584.2|CP017295.1	CCTyper	OPERON	1620933	1626791	5859	-	.	ID=SEQF9584.2|CP017295.1@37;Genome_ID=SEQF9584.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1527,1528,1529,1530;E-values=7.20e-140,1.30e-31,9.60e-99,2.50e-231;CoverageSeq=0.994,0.954,0.911,0.726;CoverageHMM=1.0,0.888,0.996,0.976;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9584.2|CP017295.1	CCTyper	CDS	1622301	1623209	303	-	.	ID=SEQF9584.2|CP017295.1_1529_cas;Genome_ID=SEQF9584.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9.6e-99;Score=326.9;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF9584.2|CP017295.1	CCTyper	CDS	1621973	1622296	108	-	.	ID=SEQF9584.2|CP017295.1_1528_cas;Genome_ID=SEQF9584.2;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-31;Score=106.2;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF9584.2|CP017295.1	CCTyper	CDS	1623381	1626791	1137	-	.	ID=SEQF9584.2|CP017295.1_1530_cas;Genome_ID=SEQF9584.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.4999999999999998e-231;Score=767.3;Coverage_Seq=0.7255936675461742;Coverage_Hmm=0.9759036144578314
SEQF9584.2|CP017295.1	CCTyper	CDS	1620933	1621976	348	-	.	ID=SEQF9584.2|CP017295.1_1527_cas;Genome_ID=SEQF9584.2;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=7.2e-140;Score=462.7;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0
