SEQF9722.1|JAACCG010000022.1	CCTyper	repeat_region	40034	40773	740	+	.	ID=SEQF9722.1|JAACCG010000022.1_1;Genome_ID=SEQF9722.1;Note=Predictor:CCtyper;Start:40034;End:40773;Consensus_Repeat:GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Number_of_Repeats:12;Repeat_Length:36;Average_Spacer_Length:28;Repeat_Identity:94.3;Spacer_Identity:39.7;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.438;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40034	40069	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT1;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40070	40097	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER1;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=TGTACTCGGCTATGTGCTGGGCATACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40098	40133	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT2;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40134	40161	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER2;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=CCACACCTTCGCACCCCACTCCCAGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40162	40197	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT3;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40198	40225	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER3;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GTCGAACCTGGATTGGATTAGCCAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40226	40261	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT4;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40262	40289	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER4;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=CCACAAGCTCGCCACCGTCCTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40290	40325	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT5;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40326	40353	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER5;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=TGTCTTTGCCGCCGTGGTCGATGCGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40354	40389	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT6;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40390	40417	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER6;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=CGCGGGGCTTCCTGGACTCGACTTTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40418	40453	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT7;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40454	40481	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER7;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=ACATCCATCAAGTTCAGGGCGTTAATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40482	40517	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT8;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40518	40545	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER8;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GTCTGCTGCAATTACCGCGTCGTCTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40546	40581	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT9;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40582	40609	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER9;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=TGTTGGGTGAGCTGTTGTTGTGCGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40610	40645	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT10;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40646	40673	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER10;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=CCGCCGGTACCATCAACTGGGATGTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40674	40709	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT11;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTGAACCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	binding_site	40710	40737	28	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_SPACER11;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GACTTGTGATGCTTGCGGAGGTGGGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000022.1	CCTyper	direct_repeat	40738	40773	36	+	.	ID=SEQF9722.1|JAACCG010000022.1_1_REPEAT12;Parent=SEQF9722.1|JAACCG010000022.1_1;Note=GAAGTCTATCAGGGGTAATGAGAACTAAAATTCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	repeat_region	955	1226	272	+	.	ID=SEQF9722.1|JAACCG010000058.1_2;Genome_ID=SEQF9722.1;Note=Predictor:CCtyper;Start:955;End:1226;Consensus_Repeat:GTGCTCCCCGCGTGAGCGGGGATGAGCC;Number_of_Repeats:5;Repeat_Length:28;Average_Spacer_Length:33;Repeat_Identity:92.3;Spacer_Identity:44.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.953;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	direct_repeat	955	982	28	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_REPEAT1;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTGCTCCCCGCGTGAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	binding_site	983	1015	33	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_SPACER1;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=CCTCAAGGAACTGTTGGACGAAATGTATTCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	direct_repeat	1016	1043	28	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_REPEAT2;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTGCTCCCCGCGTGAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	binding_site	1044	1076	33	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_SPACER2;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=CGTTGCCACGGAGTCTATCGGCGTGGGCTCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	direct_repeat	1077	1104	28	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_REPEAT3;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTGCTCCCCGCGTGAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	binding_site	1105	1137	33	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_SPACER3;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GGTGAGGGTGTATGGCGAATTTATGCCCCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	direct_repeat	1138	1165	28	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_REPEAT4;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTGCTCCCCGCGTGAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	binding_site	1166	1198	33	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_SPACER4;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTCCGCGATGACGTATACGGGAACGCCGACATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000058.1	CCTyper	direct_repeat	1199	1226	28	+	.	ID=SEQF9722.1|JAACCG010000058.1_2_REPEAT5;Parent=SEQF9722.1|JAACCG010000058.1_2;Note=GTGCTCCCCGCGTGAGCGGGGATAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9722.1|JAACCG010000079.1	CCTyper	OPERON	1	8839	8839	-	.	ID=SEQF9722.1|JAACCG010000079.1@1;Genome_ID=SEQF9722.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_0_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_7_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_1_CAS-I;Positions=1,2,3,4,5,6,7;E-values=9.80e-106,1.60e-57,1.00e-44,2.90e-131,1.50e-25,6.30e-111,1.60e-59;CoverageSeq=0.839,0.966,0.674,0.966,0.71,0.84,0.417;CoverageHMM=0.989,0.995,0.984,0.997,0.986,0.983,0.482;Strand_Interference=-1;Strand_Adaptation=-1
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	1	948	316	-	.	ID=SEQF9722.1|JAACCG010000079.1_1_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=9.8e-106;Score=349.9;Coverage_Seq=0.8386075949367089;Coverage_Hmm=0.9888475836431226
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	6059	8839	927	-	.	ID=SEQF9722.1|JAACCG010000079.1_7_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.6000000000000002e-59;Score=199.1;Coverage_Seq=0.4174757281553398;Coverage_Hmm=0.4818791946308725
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	1643	2359	239	-	.	ID=SEQF9722.1|JAACCG010000079.1_3_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=-;E-value=1e-44;Score=149.7;Coverage_Seq=0.6736401673640168;Coverage_Hmm=0.9835164835164835
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	948	1646	233	-	.	ID=SEQF9722.1|JAACCG010000079.1_2_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-57;Score=192.2;Coverage_Seq=0.9656652360515021;Coverage_Hmm=0.995049504950495
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	2373	3515	381	-	.	ID=SEQF9722.1|JAACCG010000079.1_4_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=2.9e-131;Score=435.3;Coverage_Seq=0.9658792650918635;Coverage_Hmm=0.9972144846796658
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	4215	5960	582	-	.	ID=SEQF9722.1|JAACCG010000079.1_6_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=6.3e-111;Score=368.7;Coverage_Seq=0.8402061855670103;Coverage_Hmm=0.9827956989247312
SEQF9722.1|JAACCG010000079.1	CCTyper	CDS	3551	4222	224	-	.	ID=SEQF9722.1|JAACCG010000079.1_5_cas;Genome_ID=SEQF9722.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=-;E-value=1.5e-25;Score=87.4;Coverage_Seq=0.7098214285714286;Coverage_Hmm=0.9861111111111112