SEQF9760.1|CAJVUI010000010.1	CCTyper	repeat_region	24452	25541	1090	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1;Genome_ID=SEQF9760.1;Note=Predictor:CCtyper;Start:24452;End:25541;Consensus_Repeat:ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Number_of_Repeats:20;Repeat_Length:33.5;Average_Spacer_Length:22.1;Repeat_Identity:94.1;Spacer_Identity:34.5;Spacer_Length_Sem:2.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-B;Subtype_Probability:0.298;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24452	24485	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT1;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24486	24522	37	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER1;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=GTGATGGTGTGTGTGGAGGATGTCCTCCATAGGGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24523	24556	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT2;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24557	24596	40	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER2;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AGGAATGTCAGTTAAAACCAAATCCCAACCTATTCCTGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24597	24630	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT3;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24631	24670	40	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER3;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACTAACTCAACAACATTATCTTGACTATCAATTTTATGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24671	24704	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT4;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24705	24730	26	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER4;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AACAAATCTTTATCTGATAATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24731	24764	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT5;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24765	24777	13	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER5;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=TTGCTTCTAGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24778	24811	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT6;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24812	24835	24	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER6;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AAAGAGAATAAAAGACTGATAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24836	24869	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT7;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24870	24883	14	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER7;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ATAGATTAAATGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24884	24917	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT8;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24918	24927	10	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER8;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=TAAAAAAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	24928	24961	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT9;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	24962	25002	41	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER9;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AGTTGGTGATAAAAATAAACTCAAAAGAGTTTAGGGGCTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25003	25026	24	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT10;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AATCCTTGTTTTTATGGAATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25027	25037	11	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER10;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=GAAAGGGCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25038	25071	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT11;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25072	25083	12	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER11;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=CTTGATAAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25084	25117	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT12;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25118	25131	14	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER12;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AAAAATGACATGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25132	25165	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT13;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25166	25179	14	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER13;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=GTTAAGCCTCAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25180	25213	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT14;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25214	25224	11	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER14;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=GCCCAGGAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25225	25258	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT15;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25259	25278	20	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER15;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=AATAGTAGGAACGCCAAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25279	25312	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT16;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25313	25329	17	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER16;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=TTTAAAAAAGAAATGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25330	25363	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT17;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25364	25379	16	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER17;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=GGGTGTTGAAGGGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25380	25413	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT18;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25414	25435	22	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER18;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=TCGAATTCAATGATAATGTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25436	25469	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT19;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	binding_site	25470	25507	38	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_SPACER19;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=TTATCTTGATAATGAGGATAATAAGTATTGCATCAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	direct_repeat	25508	25541	34	+	.	ID=SEQF9760.1|CAJVUI010000010.1-1_1_REPEAT20;Parent=SEQF9760.1|CAJVUI010000010.1-1_1;Note=ACAATCCTTGTTTTTATGGAATTAACTTTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF9760.1|CAJVUI010000010.1	CCTyper	OPERON	18891	34874	15984	-	.	ID=SEQF9760.1|CAJVUI010000010.1@1;Genome_ID=SEQF9760.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Csx1_9_CAS-III,Cas1_8_CAS-I-II-III-IV-V-VI,Cas2_4_CAS-I-II-III-IV-V-VI,Cas6_5_CAS-I-II-III-IV-V-VI,Csx1_20_CAS-III,Csm5gr7_1_CAS-III-A-III-D,Csm4gr5_0_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_2_CAS-III-A,Cas10_1_CAS-III;Positions=20,23,24,25,26,27,28,29,30,31;E-values=9.40e-84,4.70e-82,3.10e-16,2.50e-74,3.00e-67,8.00e-38,1.90e-56,2.20e-73,3.20e-27,9.00e-141;CoverageSeq=0.887,0.854,0.787,0.977,0.916,0.979,0.968,0.885,0.875,0.836;CoverageHMM=0.992,0.989,0.831,0.991,0.995,0.997,0.99,0.991,0.901,1.0;Strand_Interference=-1;Strand_Adaptation=NA
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	32403	34874	824	-	.	ID=SEQF9760.1|CAJVUI010000010.1_31_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=9e-141;Score=467.3;Coverage_Seq=0.8361650485436893;Coverage_Hmm=1.0
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	25852	26856	335	-	.	ID=SEQF9760.1|CAJVUI010000010.1_23_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Cas1_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7e-82;Score=272.1;Coverage_Seq=0.8537313432835821;Coverage_Hmm=0.9893992932862191
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	26853	27134	94	-	.	ID=SEQF9760.1|CAJVUI010000010.1_24_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.1e-16;Score=56.3;Coverage_Seq=0.7872340425531915;Coverage_Hmm=0.8314606741573034
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	27134	27799	222	-	.	ID=SEQF9760.1|CAJVUI010000010.1_25_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Cas6_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.5e-74;Score=246.3;Coverage_Seq=0.9774774774774775;Coverage_Hmm=0.9908675799086758
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	31943	32398	152	-	.	ID=SEQF9760.1|CAJVUI010000010.1_30_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_2_CAS-III-A;coding_strand=-;E-value=3.2000000000000003e-27;Score=92.4;Coverage_Seq=0.875;Coverage_Hmm=0.9014084507042254
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	31212	31940	243	-	.	ID=SEQF9760.1|CAJVUI010000010.1_29_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=2.2e-73;Score=243.4;Coverage_Seq=0.8847736625514403;Coverage_Hmm=0.9906976744186047
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	30261	31199	313	-	.	ID=SEQF9760.1|CAJVUI010000010.1_28_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_0_CAS-III-A;coding_strand=-;E-value=1.8999999999999999e-56;Score=188.4;Coverage_Seq=0.9680511182108626;Coverage_Hmm=0.9900332225913622
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	29131	30261	377	-	.	ID=SEQF9760.1|CAJVUI010000010.1_27_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=8e-38;Score=127.9;Coverage_Seq=0.9787798408488063;Coverage_Hmm=0.997289972899729
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	27801	29129	443	-	.	ID=SEQF9760.1|CAJVUI010000010.1_26_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csx1_20_CAS-III;coding_strand=-;E-value=3e-67;Score=223.8;Coverage_Seq=0.9164785553047404;Coverage_Hmm=0.9947229551451188
SEQF9760.1|CAJVUI010000010.1	CCTyper	CDS	18891	20138	416	-	.	ID=SEQF9760.1|CAJVUI010000010.1_20_cas;Genome_ID=SEQF9760.1;Feature_type=CDS;Product=Cas Prediction : Csx1_9_CAS-III;coding_strand=-;E-value=9.4e-84;Score=278.2;Coverage_Seq=0.8870192307692307;Coverage_Hmm=0.9920634920634921