Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000005.1_7	561	284	8.6e-05	17.3	2409	4091	SEQF1469.1|ABBX01000005.1	7	0.24955436720142601	0.2887323943661972	-1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000006.1_5	401	284	4.5e-06	21.5	2520	3722	SEQF1469.1|ABBX01000006.1	5	0.12219451371571072	0.16901408450704225	1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000014.1_15	508	284	0.00013	16.7	10268	11791	SEQF1469.1|ABBX01000014.1	15	0.08267716535433071	0.1443661971830986	-1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000022.1_6	348	284	3e-05	18.8	4569	5612	SEQF1469.1|ABBX01000022.1	6	0.12643678160919541	0.14788732394366197	1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000040.1_13	251	284	0.0034	12.1	9746	10498	SEQF1469.1|ABBX01000040.1	13	0.4063745019920319	0.3345070422535211	1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000095.1_4	390	284	0.0033	12.1	3932	5101	SEQF1469.1|ABBX01000095.1	4	0.3230769230769231	0.4295774647887324	-1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000102.1_4	118	284	0.001	13.8	2065	2418	SEQF1469.1|ABBX01000102.1	4	0.3728813559322034	0.1619718309859155	-1
AbiEii_0_CAS-III	SEQF1469.1|ABBX01000117.1_5	257	284	1e-05	20.4	2454	3224	SEQF1469.1|ABBX01000117.1	5	0.42023346303501946	0.3626760563380282	-1
AbiEii_2_CAS-III-C	SEQF1469.1|ABBX01000022.1_6	348	440	0.00023	15.6	4569	5612	SEQF1469.1|ABBX01000022.1	6	0.06896551724137931	0.05454545454545454	1
Cas1_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	317	3e-45	149.8	519	1409	SEQF1469.1|ABBX01000025.1	2	0.9292929292929293	0.9873817034700315	1
Cas1_0_I-II-III	SEQF1469.1|ABBX01000025.1_2	297	327	3.5e-20	67.4	519	1409	SEQF1469.1|ABBX01000025.1	2	0.9292929292929293	0.9694189602446484	1
Cas1_0_I-II-III-V	SEQF1469.1|ABBX01000025.1_2	297	315	1.6e-35	117.6	519	1409	SEQF1469.1|ABBX01000025.1	2	0.7777777777777778	0.8063492063492064	1
Cas1_0_IA	SEQF1469.1|ABBX01000025.1_2	297	347	1e-06	23.0	519	1409	SEQF1469.1|ABBX01000025.1	2	0.4074074074074074	0.3573487031700288	1
Cas1_0_IC	SEQF1469.1|ABBX01000025.1_2	297	340	6.9e-09	30.4	519	1409	SEQF1469.1|ABBX01000025.1	2	0.569023569023569	0.5029411764705882	1
Cas1_0_IE	SEQF1469.1|ABBX01000025.1_2	297	269	3.2e-05	18.4	519	1409	SEQF1469.1|ABBX01000025.1	2	0.6666666666666666	0.724907063197026	1
Cas1_0_II	SEQF1469.1|ABBX01000025.1_2	297	278	5.1e-85	280.2	519	1409	SEQF1469.1|ABBX01000025.1	2	0.9292929292929293	1.0	1
Cas1_0_V	SEQF1469.1|ABBX01000025.1_2	297	317	3.6e-13	44.3	519	1409	SEQF1469.1|ABBX01000025.1	2	0.8518518518518519	0.8517350157728707	1
Cas1_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	261	1.8e-18	61.8	519	1409	SEQF1469.1|ABBX01000025.1	2	0.7373737373737373	0.9386973180076629	1
Cas1_3_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	262	1.8e-05	19.2	519	1409	SEQF1469.1|ABBX01000025.1	2	0.6666666666666666	0.7442748091603053	1
Cas1_4_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	275	4.4e-82	270.5	519	1409	SEQF1469.1|ABBX01000025.1	2	0.9259259259259259	1.0	1
Cas1_5_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	338	4.8e-09	30.9	519	1409	SEQF1469.1|ABBX01000025.1	2	0.5723905723905723	0.5088757396449705	1
Cas1_6_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	320	5.7e-07	24.2	519	1409	SEQF1469.1|ABBX01000025.1	2	0.7070707070707071	0.715625	1
Cas1_7_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	328	3.8e-43	142.9	519	1409	SEQF1469.1|ABBX01000025.1	2	0.7777777777777778	0.7682926829268293	1
Cas1_8_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000025.1_2	297	283	4.2e-27	90.1	519	1409	SEQF1469.1|ABBX01000025.1	2	0.7441077441077442	0.8692579505300353	1
Cas3HD_0_CAS-I	SEQF1469.1|ABBX01000127.1_11	503	203	0.00018	16.5	7565	9073	SEQF1469.1|ABBX01000127.1	11	0.1610337972166998	0.3891625615763547	1
Cas3_0_CAS-I	SEQF1469.1|ABBX01000112.1_11	503	353	6.9e-05	17.2	5976	7484	SEQF1469.1|ABBX01000112.1	11	0.40556660039761433	0.3626062322946176	1
Cas3_0_I	SEQF1469.1|ABBX01000112.1_11	503	358	1.3e-05	19.5	5976	7484	SEQF1469.1|ABBX01000112.1	11	0.38767395626242546	0.3770949720670391	1
Cas3_1_CAS-I	SEQF1469.1|ABBX01000106.1_1	58	745	0.0091	9.4	1	174	SEQF1469.1|ABBX01000106.1	1	0.5172413793103449	0.042953020134228186	-1
Cas3_1_I	SEQF1469.1|ABBX01000127.1_11	503	178	0.00022	16.4	7565	9073	SEQF1469.1|ABBX01000127.1	11	0.17296222664015903	0.5112359550561798	1
Cas4_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000073.1_1	289	179	7.9e-05	18.0	1	867	SEQF1469.1|ABBX01000073.1	1	0.42214532871972316	0.5418994413407822	1
Cas4_0_I-II	SEQF1469.1|ABBX01000073.1_1	289	180	6.9e-05	17.8	1	867	SEQF1469.1|ABBX01000073.1	1	0.23875432525951557	0.31666666666666665	1
Cas9_0_II	SEQF1469.1|ABBX01000033.1_1	371	830	1.7e-61	203.7	3	1115	SEQF1469.1|ABBX01000033.1	1	0.9838274932614556	0.39759036144578314	-1
Cas9_0_II-C2	SEQF1469.1|ABBX01000033.1_1	371	967	8.9e-18	58.9	3	1115	SEQF1469.1|ABBX01000033.1	1	0.33962264150943394	0.10444674250258532	-1
Cas9_0_II-D	SEQF1469.1|ABBX01000033.1_1	371	853	4.6e-09	30.3	3	1115	SEQF1469.1|ABBX01000033.1	1	0.6064690026954178	0.26143024618991795	-1
Cas9_1_II	SEQF1469.1|ABBX01000033.1_1	371	1120	1.2e-49	164.4	3	1115	SEQF1469.1|ABBX01000033.1	1	0.8787061994609164	0.2767857142857143	-1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000007.1_2	101	198	8.2e-05	17.4	203	505	SEQF1469.1|ABBX01000007.1	2	0.37623762376237624	0.18686868686868688	1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000023.1_5	255	198	4.4e-05	18.3	3500	4264	SEQF1469.1|ABBX01000023.1	5	0.20784313725490197	0.2676767676767677	-1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000112.1_10	99	198	4.9e-05	18.1	5571	5867	SEQF1469.1|ABBX01000112.1	10	0.41414141414141414	0.20202020202020202	-1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000113.1_2	91	198	9.8e-05	17.2	485	757	SEQF1469.1|ABBX01000113.1	2	0.5274725274725275	0.24242424242424243	1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000120.1_14	238	198	0.0029	12.4	11961	12674	SEQF1469.1|ABBX01000120.1	14	0.13025210084033614	0.16161616161616163	-1
CasR_0_CAS-III-A	SEQF1469.1|ABBX01000081.1_1	620	398	0.0016	12.5	3	1862	SEQF1469.1|ABBX01000081.1	1	0.19032258064516128	0.2964824120603015	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000007.1_2	101	218	0.00011	16.6	203	505	SEQF1469.1|ABBX01000007.1	2	0.38613861386138615	0.17889908256880735	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000023.1_5	255	218	4e-06	21.3	3500	4264	SEQF1469.1|ABBX01000023.1	5	0.3137254901960784	0.3853211009174312	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000112.1_10	99	218	7.4e-05	17.1	5571	5867	SEQF1469.1|ABBX01000112.1	10	0.37373737373737376	0.1743119266055046	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000113.1_2	91	218	2.3e-05	18.8	485	757	SEQF1469.1|ABBX01000113.1	2	0.5164835164835165	0.21559633027522937	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000120.1_14	238	218	0.0048	11.2	11961	12674	SEQF1469.1|ABBX01000120.1	14	0.11764705882352941	0.12844036697247707	-1
Cmr5gr11_1_CAS-III-B	SEQF1469.1|ABBX01000006.1_5	401	137	0.00059	14.8	2520	3722	SEQF1469.1|ABBX01000006.1	5	0.1396508728179551	0.43795620437956206	1
Cmr7_0_CAS-III-B	SEQF1469.1|ABBX01000069.1_3	336	187	4.9e-05	18.4	569	1576	SEQF1469.1|ABBX01000069.1	3	0.17559523809523808	0.3155080213903743	1
Cmr7_0_IIIB	SEQF1469.1|ABBX01000069.1_3	336	191	0.00034	15.5	569	1576	SEQF1469.1|ABBX01000069.1	3	0.16964285714285715	0.31413612565445026	1
Csa3_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000112.1_10	99	118	0.0008	14.9	5571	5867	SEQF1469.1|ABBX01000112.1	10	0.43434343434343436	0.3898305084745763	-1
Csn2_7_CAS-II-A	SEQF1469.1|ABBX01000022.1_6	348	372	0.00031	14.9	4569	5612	SEQF1469.1|ABBX01000022.1	6	0.22126436781609196	0.20430107526881722	1
Csn2_7_CAS-II-A	SEQF1469.1|ABBX01000117.1_5	257	372	0.0008	13.6	2454	3224	SEQF1469.1|ABBX01000117.1	5	0.42023346303501946	0.31451612903225806	-1
Csx15_0_CAS-I-III	SEQF1469.1|ABBX01000053.1_3	281	101	0.0052	11.7	1210	2052	SEQF1469.1|ABBX01000053.1	3	0.17793594306049823	0.3465346534653465	-1
Csx1_5_CAS-III	SEQF1469.1|ABBX01000042.1_1	60	132	0.00025	16.3	3	182	SEQF1469.1|ABBX01000042.1	1	0.6	0.2803030303030303	1
Csx3_2_CAS-I-III	SEQF1469.1|ABBX01000014.1_15	508	277	4.3e-05	17.9	10268	11791	SEQF1469.1|ABBX01000014.1	15	0.07283464566929133	0.10830324909747292	-1
Csx3_2_CAS-I-III	SEQF1469.1|ABBX01000081.1_4	474	277	2.1e-05	18.9	4034	5455	SEQF1469.1|ABBX01000081.1	4	0.11392405063291139	0.11552346570397112	1
CysH_0_IVB	SEQF1469.1|ABBX01000120.1_2	276	249	0.0007	14.4	465	1292	SEQF1469.1|ABBX01000120.1	2	0.13043478260869565	0.13654618473895583	1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000125.1_3	183	160	8.4e-14	47.2	942	1490	SEQF1469.1|ABBX01000125.1	3	0.8524590163934426	0.9375	1
Mem_04_0_CAS-III-D	SEQF1469.1|ABBX01000116.1_1	85	241	0.0011	13.6	2	256	SEQF1469.1|ABBX01000116.1	1	0.7411764705882353	0.27385892116182575	1
RT_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000020.1_1	85	213	1.7e-06	22.9	2	256	SEQF1469.1|ABBX01000020.1	1	0.5647058823529412	0.20187793427230047	1
RT_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000020.1_2	316	213	1.5e-36	121.2	314	1261	SEQF1469.1|ABBX01000020.1	2	0.6107594936708861	0.7511737089201878	1
RT_0_CAS-III-AM-III-B	SEQF1469.1|ABBX01000020.1_2	316	298	4.6e-10	34.0	314	1261	SEQF1469.1|ABBX01000020.1	2	0.49683544303797467	0.4697986577181208	1
RecD_0_IVD	SEQF1469.1|ABBX01000022.1_6	348	763	8.9e-05	15.8	4569	5612	SEQF1469.1|ABBX01000022.1	6	0.3649425287356322	0.16120576671035386	1
RecD_0_IVD	SEQF1469.1|ABBX01000127.1_37	703	763	3.1e-06	20.6	41241	43349	SEQF1469.1|ABBX01000127.1	37	0.22475106685633	0.2018348623853211	1
WYL_0_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000023.1_5	255	313	0.00017	16.3	3500	4264	SEQF1469.1|ABBX01000023.1	5	0.16862745098039217	0.13738019169329074	-1
WYL_1_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000046.1_13	114	462	0.0031	11.6	9964	10305	SEQF1469.1|ABBX01000046.1	13	0.6842105263157895	0.17316017316017315	-1
WYL_2_CAS-I-II-III-IV-V-VI	SEQF1469.1|ABBX01000046.1_13	114	462	0.0031	11.6	9964	10305	SEQF1469.1|ABBX01000046.1	13	0.6842105263157895	0.17316017316017315	-1