Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_112	270	284	1.2e-05	20.9	138802	139611	SEQF2545.1|CP003902.1	112	0.3888888888888889	0.35563380281690143	-1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_155	267	284	6.4e-05	18.5	186785	187585	SEQF2545.1|CP003902.1	155	0.21348314606741572	0.19718309859154928	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_30	239	284	0.0004	15.9	42941	43657	SEQF2545.1|CP003902.1	30	0.4225941422594142	0.3485915492957746	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_340	942	284	1e-06	24.4	391315	394140	SEQF2545.1|CP003902.1	340	0.19957537154989385	0.5422535211267606	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_472	416	284	0.00061	15.3	545333	546580	SEQF2545.1|CP003902.1	472	0.07932692307692307	0.11619718309859155	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_571	260	284	0.00016	17.2	665785	666564	SEQF2545.1|CP003902.1	571	0.5153846153846153	0.4647887323943662	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_611	376	284	0.00028	16.4	718033	719160	SEQF2545.1|CP003902.1	611	0.2074468085106383	0.2676056338028169	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_743	283	284	0.003	13.0	854694	855542	SEQF2545.1|CP003902.1	743	0.3674911660777385	0.30985915492957744	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_757	388	284	8.1e-05	18.1	875204	876367	SEQF2545.1|CP003902.1	757	0.327319587628866	0.44014084507042256	1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_788	555	284	0.002	13.6	910751	912415	SEQF2545.1|CP003902.1	788	0.14234234234234233	0.27816901408450706	-1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_826	281	284	1.5e-05	20.6	960678	961520	SEQF2545.1|CP003902.1	826	0.44483985765124556	0.3274647887323944	-1
AbiEii_0_CAS-III	SEQF2545.1|CP003902.1_905	236	284	0.00014	17.4	1048666	1049373	SEQF2545.1|CP003902.1	905	0.4152542372881356	0.33098591549295775	-1
AbiEii_1_CAS-III-A	SEQF2545.1|CP003902.1_155	267	335	0.0014	13.7	186785	187585	SEQF2545.1|CP003902.1	155	0.15730337078651685	0.11940298507462686	1
AbiEii_1_CAS-III-A	SEQF2545.1|CP003902.1_340	942	335	0.032	9.2	391315	394140	SEQF2545.1|CP003902.1	340	0.31422505307855625	0.4925373134328358	1
AbiEii_2_CAS-III-C	SEQF2545.1|CP003902.1_3	358	440	0.0015	13.7	2761	3834	SEQF2545.1|CP003902.1	3	0.09497206703910614	0.07727272727272727	1
Cas10_1_CAS-III	SEQF2545.1|CP003902.1_959	505	654	5e-05	17.9	1112772	1114286	SEQF2545.1|CP003902.1	959	0.29108910891089107	0.2324159021406728	1
Cas12e_1_CAS-V-E	SEQF2545.1|CP003902.1_221	186	986	0.0063	10.1	243620	244177	SEQF2545.1|CP003902.1	221	0.20967741935483872	0.03955375253549696	1
Cas12f2_1_CAS-V-F	SEQF2545.1|CP003902.1_422	117	422	3.0	2.6	485168	485518	SEQF2545.1|CP003902.1	422	0.358974358974359	0.08293838862559241	1
Cas12j_0_V-J	SEQF2545.1|CP003902.1_422	117	758	2.0	2.0	485168	485518	SEQF2545.1|CP003902.1	422	0.42735042735042733	0.04617414248021108	1
Cas13d_0_CAS-VI-D	SEQF2545.1|CP003902.1_779	295	929	0.0038	11.2	898483	899367	SEQF2545.1|CP003902.1	779	0.3559322033898305	0.11517761033369214	1
Cas2_0_CAS-III-AM	SEQF2545.1|CP003902.1_653	598	95	0.014	11.7	764763	766556	SEQF2545.1|CP003902.1	653	0.17224080267558528	0.631578947368421	1
Cas3HD_0_CAS-I	SEQF2545.1|CP003902.1_610	855	203	7e-06	21.8	715432	717996	SEQF2545.1|CP003902.1	610	0.16842105263157894	0.6699507389162561	-1
Cas3HD_0_CAS-I	SEQF2545.1|CP003902.1_822	366	203	0.0011	14.6	956419	957516	SEQF2545.1|CP003902.1	822	0.19398907103825136	0.24630541871921183	1
Cas3HD_0_CAS-I	SEQF2545.1|CP003902.1_959	505	203	0.0001	18.1	1112772	1114286	SEQF2545.1|CP003902.1	959	0.17425742574257425	0.42857142857142855	1
Cas3_0_CAS-I	SEQF2545.1|CP003902.1_316	1149	353	7.4e-08	27.7	368156	371602	SEQF2545.1|CP003902.1	316	0.16013925152306355	0.5354107648725213	-1
Cas3_0_CAS-I	SEQF2545.1|CP003902.1_491	669	353	8.5e-06	20.9	570428	572434	SEQF2545.1|CP003902.1	491	0.3243647234678625	0.5949008498583569	1
Cas3_0_CAS-I	SEQF2545.1|CP003902.1_645	687	353	1.5e-08	29.9	755124	757184	SEQF2545.1|CP003902.1	645	0.15574963609898107	0.3031161473087819	-1
Cas3_0_CAS-I	SEQF2545.1|CP003902.1_727	607	353	5.8e-10	34.6	838843	840663	SEQF2545.1|CP003902.1	727	0.33607907742998355	0.5835694050991501	1
Cas3_0_CAS-I-D	SEQF2545.1|CP003902.1_95	644	626	0.00089	13.4	111793	113724	SEQF2545.1|CP003902.1	95	0.15527950310559005	0.15654952076677317	1
Cas3_0_I	SEQF2545.1|CP003902.1_316	1149	358	4.3e-06	21.9	368156	371602	SEQF2545.1|CP003902.1	316	0.13489991296779807	0.43854748603351956	-1
Cas3_0_I	SEQF2545.1|CP003902.1_491	669	358	5.8e-07	24.7	570428	572434	SEQF2545.1|CP003902.1	491	0.32585949177877427	0.5977653631284916	1
Cas3_0_I	SEQF2545.1|CP003902.1_645	687	358	1.6e-08	29.9	755124	757184	SEQF2545.1|CP003902.1	645	0.12372634643377002	0.23743016759776536	-1
Cas3_0_I	SEQF2545.1|CP003902.1_727	607	358	3.1e-09	32.2	838843	840663	SEQF2545.1|CP003902.1	727	0.32948929159802304	0.5726256983240223	1
Cas3_0_ID	SEQF2545.1|CP003902.1_645	687	357	4.7e-06	21.7	755124	757184	SEQF2545.1|CP003902.1	645	0.2445414847161572	0.453781512605042	-1
Cas3_0_ID	SEQF2545.1|CP003902.1_727	607	357	0.00031	15.7	838843	840663	SEQF2545.1|CP003902.1	727	0.16639209225700163	0.2605042016806723	1
Cas3_0_ID	SEQF2545.1|CP003902.1_95	644	357	0.0014	13.6	111793	113724	SEQF2545.1|CP003902.1	95	0.11024844720496894	0.19887955182072828	1
Cas3_1_CAS-I	SEQF2545.1|CP003902.1_316	1149	745	2.4e-07	25.3	368156	371602	SEQF2545.1|CP003902.1	316	0.22193211488250653	0.24026845637583893	-1
Cas3_1_CAS-I	SEQF2545.1|CP003902.1_645	687	745	9.5e-08	26.6	755124	757184	SEQF2545.1|CP003902.1	645	0.10043668122270742	0.0953020134228188	-1
Cas3_1_CAS-I-D	SEQF2545.1|CP003902.1_645	687	353	5.3e-06	21.6	755124	757184	SEQF2545.1|CP003902.1	645	0.23580786026200873	0.44192634560906513	-1
Cas3_1_CAS-I-D	SEQF2545.1|CP003902.1_727	607	353	0.00012	17.1	838843	840663	SEQF2545.1|CP003902.1	727	0.16639209225700163	0.26345609065155806	1
Cas3_1_CAS-I-D	SEQF2545.1|CP003902.1_95	644	353	0.0019	13.1	111793	113724	SEQF2545.1|CP003902.1	95	0.062111801242236024	0.11331444759206799	1
Cas3_1_I	SEQF2545.1|CP003902.1_610	855	178	2.8e-06	23.3	715432	717996	SEQF2545.1|CP003902.1	610	0.12748538011695906	0.6179775280898876	-1
Cas3_1_I	SEQF2545.1|CP003902.1_822	366	178	0.00038	16.4	956419	957516	SEQF2545.1|CP003902.1	822	0.12295081967213115	0.23595505617977527	1
Cas3_1_I	SEQF2545.1|CP003902.1_959	505	178	0.0063	12.4	1112772	1114286	SEQF2545.1|CP003902.1	959	0.16633663366336635	0.5168539325842697	1
Cas3_2_CAS-I	SEQF2545.1|CP003902.1_645	687	967	2.6e-08	28.2	755124	757184	SEQF2545.1|CP003902.1	645	0.4163027656477438	0.29782833505687695	-1
Cas3_2_CAS-I	SEQF2545.1|CP003902.1_727	607	967	2.1e-06	21.9	838843	840663	SEQF2545.1|CP003902.1	727	0.3871499176276771	0.23164426059979318	1
Cas3_2_CAS-I	SEQF2545.1|CP003902.1_95	644	967	0.00069	13.6	111793	113724	SEQF2545.1|CP003902.1	95	0.18944099378881987	0.12926577042399173	1
Cas3d_1_CAS-I-D	SEQF2545.1|CP003902.1_95	644	627	1.3e-06	22.7	111793	113724	SEQF2545.1|CP003902.1	95	0.15372670807453417	0.15311004784688995	1
Cas4_0_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_856	127	179	0.0012	14.9	994316	994696	SEQF2545.1|CP003902.1	856	0.25984251968503935	0.18435754189944134	1
Cas4_0_I-II-V	SEQF2545.1|CP003902.1_856	127	177	0.0018	14.2	994316	994696	SEQF2545.1|CP003902.1	856	0.2677165354330709	0.1864406779661017	1
Cas5_4_CAS-I-B	SEQF2545.1|CP003902.1_20	1024	190	0.0047	12.4	29864	32935	SEQF2545.1|CP003902.1	20	0.056640625	0.3	-1
Cas5f_1_CAS-I-F	SEQF2545.1|CP003902.1_118	224	293	0.00051	15.3	147615	148286	SEQF2545.1|CP003902.1	118	0.14285714285714285	0.10921501706484642	-1
Cas6_15_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_910	513	112	3.5e-05	20.3	1055222	1056760	SEQF2545.1|CP003902.1	910	0.18323586744639375	0.7053571428571429	-1
Cas8a1_1_IA	SEQF2545.1|CP003902.1_369	125	316	0.0023	12.5	424470	424844	SEQF2545.1|CP003902.1	369	0.36	0.14240506329113925	1
Cas8c_1_CAS-I-C	SEQF2545.1|CP003902.1_419	699	570	0.0029	12.0	478481	480577	SEQF2545.1|CP003902.1	419	0.12017167381974249	0.1456140350877193	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_158	154	218	0.0025	12.9	189570	190031	SEQF2545.1|CP003902.1	158	0.3051948051948052	0.21100917431192662	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_256	325	218	0.0013	13.7	288615	289589	SEQF2545.1|CP003902.1	256	0.1723076923076923	0.23853211009174313	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_99	604	218	0.0064	11.5	120348	122159	SEQF2545.1|CP003902.1	99	0.11092715231788079	0.22477064220183487	-1
Csf4_1_IVA1	SEQF2545.1|CP003902.1_215	658	802	0.00043	14.4	239359	241332	SEQF2545.1|CP003902.1	215	0.1474164133738602	0.12468827930174564	1
Csm2gr11_3_CAS-III-D	SEQF2545.1|CP003902.1_780	262	130	0.01	11.5	899364	900149	SEQF2545.1|CP003902.1	780	0.16793893129770993	0.3384615384615385	1
Csn2_10_CAS-II-A	SEQF2545.1|CP003902.1_295	534	321	0.016	10.2	337837	339438	SEQF2545.1|CP003902.1	295	0.08801498127340825	0.14641744548286603	1
Csn2_7_CAS-II-A	SEQF2545.1|CP003902.1_212	256	372	0.013	10.3	236928	237695	SEQF2545.1|CP003902.1	212	0.2578125	0.17473118279569894	-1
Csn2_7_CAS-II-A	SEQF2545.1|CP003902.1_643	497	372	0.0069	11.2	751896	753386	SEQF2545.1|CP003902.1	643	0.16700201207243462	0.22043010752688172	1
Csx16_2_CAS-I-III	SEQF2545.1|CP003902.1_408	158	90	0.0021	14.2	467341	467814	SEQF2545.1|CP003902.1	408	0.4873417721518987	0.6444444444444445	1
Csx19_20_CAS-III-D	SEQF2545.1|CP003902.1_39	234	147	0.006	12.1	55808	56509	SEQF2545.1|CP003902.1	39	0.12393162393162394	0.19727891156462585	-1
Csx1_18_CAS-III	SEQF2545.1|CP003902.1_460	315	376	0.0023	13.4	533215	534159	SEQF2545.1|CP003902.1	460	0.2698412698412698	0.23670212765957446	1
Csx3_2_CAS-I-III	SEQF2545.1|CP003902.1_239	520	277	0.00043	15.3	266637	268196	SEQF2545.1|CP003902.1	239	0.05961538461538462	0.11913357400722022	1
Csx3_2_CAS-I-III	SEQF2545.1|CP003902.1_472	416	277	0.00073	14.6	545333	546580	SEQF2545.1|CP003902.1	472	0.11298076923076923	0.17328519855595667	1
Csx3_2_CAS-I-III	SEQF2545.1|CP003902.1_515	496	277	0.0012	13.9	597864	599351	SEQF2545.1|CP003902.1	515	0.12903225806451613	0.23104693140794225	-1
Csx3_2_CAS-I-III	SEQF2545.1|CP003902.1_647	461	277	5.1e-07	24.9	758254	759636	SEQF2545.1|CP003902.1	647	0.10629067245119306	0.09025270758122744	-1
Csy2_0_IF	SEQF2545.1|CP003902.1_118	224	296	0.00045	15.4	147615	148286	SEQF2545.1|CP003902.1	118	0.14732142857142858	0.11148648648648649	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_603	216	160	3.8e-49	162.8	707106	707753	SEQF2545.1|CP003902.1	603	0.7268518518518519	0.9875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2545.1|CP003902.1_97	1016	160	2.6e-12	43.0	115756	118803	SEQF2545.1|CP003902.1	97	0.1594488188976378	0.83125	1
Mem_DnaJ_0_CAS-III-AM	SEQF2545.1|CP003902.1_202	401	284	3.2e-06	22.5	221929	223131	SEQF2545.1|CP003902.1	202	0.13466334164588528	0.20774647887323944	1
RecD_0_IVD	SEQF2545.1|CP003902.1_645	687	763	0.0054	10.7	755124	757184	SEQF2545.1|CP003902.1	645	0.10043668122270742	0.08256880733944955	-1
RecD_0_IVD	SEQF2545.1|CP003902.1_843	1240	763	0.001	13.1	978651	982370	SEQF2545.1|CP003902.1	843	0.062096774193548386	0.09960681520314547	-1
RecD_0_IVD	SEQF2545.1|CP003902.1_946	573	763	0.0024	11.8	1096078	1097796	SEQF2545.1|CP003902.1	946	0.19720767888307156	0.14678899082568808	-1
RecD_0_IVD	SEQF2545.1|CP003902.1_970	686	763	1.9e-08	28.7	1123876	1125933	SEQF2545.1|CP003902.1	970	0.32653061224489793	0.27391874180865006	-1
TPR_0_CAS-III-A	SEQF2545.1|CP003902.1_771	254	435	0.00072	14.5	890761	891522	SEQF2545.1|CP003902.1	771	0.4094488188976378	0.23908045977011494	-1
TPR_0_CAS-III-B	SEQF2545.1|CP003902.1_363	251	488	9.1e-06	20.5	418612	419364	SEQF2545.1|CP003902.1	363	0.6772908366533864	0.35860655737704916	1
TPR_0_CAS-III-B	SEQF2545.1|CP003902.1_59	380	488	3.6e-08	28.4	72693	73832	SEQF2545.1|CP003902.1	59	0.7736842105263158	0.569672131147541	1
TPR_0_CAS-III-B	SEQF2545.1|CP003902.1_895	479	488	0.0018	12.9	1037967	1039403	SEQF2545.1|CP003902.1	895	0.27139874739039666	0.22745901639344263	-1
TPR_1_CAS-III-A	SEQF2545.1|CP003902.1_115	848	462	0.00085	13.9	143017	145560	SEQF2545.1|CP003902.1	115	0.17570754716981132	0.3181818181818182	1
TPR_1_CAS-III-B	SEQF2545.1|CP003902.1_115	848	537	0.00032	15.4	143017	145560	SEQF2545.1|CP003902.1	115	0.2205188679245283	0.32774674115456237	1
TPR_1_CAS-III-B	SEQF2545.1|CP003902.1_363	251	537	0.013	10.0	418612	419364	SEQF2545.1|CP003902.1	363	0.6653386454183267	0.2774674115456238	1
TPR_1_CAS-III-B	SEQF2545.1|CP003902.1_59	380	537	2e-11	39.1	72693	73832	SEQF2545.1|CP003902.1	59	0.7052631578947368	0.26629422718808193	1
TPR_1_CAS-III-B	SEQF2545.1|CP003902.1_895	479	537	6.9e-06	20.9	1037967	1039403	SEQF2545.1|CP003902.1	895	0.511482254697286	0.3649906890130354	-1