Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_201	600	284	0.0038	12.7	198722	200521	SEQF2721.1|CP005957.1	201	0.051666666666666666	0.10915492957746478	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_213	235	284	0.00011	17.9	210098	210802	SEQF2721.1|CP005957.1	213	0.28085106382978725	0.2323943661971831	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_254	590	284	0.0014	14.2	244747	246516	SEQF2721.1|CP005957.1	254	0.13728813559322034	0.29225352112676056	1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_345	337	284	0.00086	14.9	342376	343386	SEQF2721.1|CP005957.1	345	0.07418397626112759	0.0880281690140845	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_390	252	284	1e-08	31.0	385564	386319	SEQF2721.1|CP005957.1	390	0.376984126984127	0.323943661971831	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_517	405	284	0.001	14.7	509451	510665	SEQF2721.1|CP005957.1	517	0.25925925925925924	0.35563380281690143	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_532	354	284	0.0036	12.9	523980	525041	SEQF2721.1|CP005957.1	532	0.10451977401129943	0.1267605633802817	1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_571	288	284	0.0002	17.0	563558	564421	SEQF2721.1|CP005957.1	571	0.3611111111111111	0.35563380281690143	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_575	249	284	9.2e-05	18.1	567602	568348	SEQF2721.1|CP005957.1	575	0.4578313253012048	0.3732394366197183	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_759	228	284	0.00034	16.2	752627	753310	SEQF2721.1|CP005957.1	759	0.2675438596491228	0.2112676056338028	1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_771	228	284	0.0007	15.2	766672	767355	SEQF2721.1|CP005957.1	771	0.39473684210526316	0.2992957746478873	1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_859	739	284	6.4e-06	21.9	850831	853047	SEQF2721.1|CP005957.1	859	0.15561569688768606	0.4119718309859155	-1
AbiEii_0_CAS-III	SEQF2721.1|CP005957.1_888	533	284	0.00065	15.3	877981	879579	SEQF2721.1|CP005957.1	888	0.04690431519699812	0.0880281690140845	-1
AbiEii_1_CAS-III-A	SEQF2721.1|CP005957.1_390	252	335	0.0019	13.3	385564	386319	SEQF2721.1|CP005957.1	390	0.4365079365079365	0.33134328358208953	-1
Cas10_1_CAS-III	SEQF2721.1|CP005957.1_331	497	654	0.00016	16.3	330641	332131	SEQF2721.1|CP005957.1	331	0.36217303822937624	0.26758409785932724	-1
Cas11b_0_CAS-I-B	SEQF2721.1|CP005957.1_926	559	170	0.012	11.4	916004	917680	SEQF2721.1|CP005957.1	926	0.2003577817531306	0.38823529411764707	1
Cas12c_0_CAS-V-C	SEQF2721.1|CP005957.1_349	198	1272	0.0017	11.9	346898	347491	SEQF2721.1|CP005957.1	349	0.4444444444444444	0.07311320754716981	-1
Cas1_8_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_990	219	283	0.0014	13.8	972912	973568	SEQF2721.1|CP005957.1	990	0.365296803652968	0.2579505300353357	-1
Cas2_0_CAS-III-AM	SEQF2721.1|CP005957.1_187	258	95	0.0014	15.0	181754	182527	SEQF2721.1|CP005957.1	187	0.39147286821705424	0.5894736842105263	1
Cas3HD_0_CAS-I	SEQF2721.1|CP005957.1_331	497	203	0.00042	16.1	330641	332131	SEQF2721.1|CP005957.1	331	0.15492957746478872	0.458128078817734	-1
Cas3_0_CAS-I	SEQF2721.1|CP005957.1_1041	456	353	5.1e-08	28.3	999906	1001273	SEQF2721.1|CP005957.1	1041	0.46710526315789475	0.6062322946175638	1
Cas3_0_CAS-I	SEQF2721.1|CP005957.1_44	692	353	2.2e-10	36.1	45009	47084	SEQF2721.1|CP005957.1	44	0.20086705202312138	0.39660056657223797	-1
Cas3_0_CAS-I	SEQF2721.1|CP005957.1_940	465	353	0.014	10.4	931844	933238	SEQF2721.1|CP005957.1	940	0.28817204301075267	0.26345609065155806	-1
Cas3_0_I	SEQF2721.1|CP005957.1_1041	456	358	3.7e-07	25.5	999906	1001273	SEQF2721.1|CP005957.1	1041	0.44956140350877194	0.5837988826815642	1
Cas3_0_I	SEQF2721.1|CP005957.1_44	692	358	5.5e-10	34.8	45009	47084	SEQF2721.1|CP005957.1	44	0.1994219653179191	0.388268156424581	-1
Cas3_0_I	SEQF2721.1|CP005957.1_940	465	358	0.019	10.0	931844	933238	SEQF2721.1|CP005957.1	940	0.2129032258064516	0.20391061452513967	-1
Cas3_0_ID	SEQF2721.1|CP005957.1_1041	456	357	0.00049	15.2	999906	1001273	SEQF2721.1|CP005957.1	1041	0.3026315789473684	0.35014005602240894	1
Cas3_0_ID	SEQF2721.1|CP005957.1_44	692	357	0.0025	12.8	45009	47084	SEQF2721.1|CP005957.1	44	0.13728323699421965	0.25770308123249297	-1
Cas3_1_CAS-I	SEQF2721.1|CP005957.1_1041	456	745	4.5e-08	27.8	999906	1001273	SEQF2721.1|CP005957.1	1041	0.4057017543859649	0.26711409395973157	1
Cas3_1_CAS-I	SEQF2721.1|CP005957.1_44	692	745	7e-11	37.1	45009	47084	SEQF2721.1|CP005957.1	44	0.19219653179190752	0.15570469798657718	-1
Cas3_1_CAS-I	SEQF2721.1|CP005957.1_50	822	745	0.00013	16.3	54666	57131	SEQF2721.1|CP005957.1	50	0.12895377128953772	0.1395973154362416	-1
Cas3_1_CAS-I-D	SEQF2721.1|CP005957.1_1041	456	353	0.00013	17.1	999906	1001273	SEQF2721.1|CP005957.1	1041	0.3026315789473684	0.35410764872521244	1
Cas3_1_CAS-I-D	SEQF2721.1|CP005957.1_44	692	353	0.0018	13.3	45009	47084	SEQF2721.1|CP005957.1	44	0.14017341040462428	0.26628895184135976	-1
Cas3_1_I	SEQF2721.1|CP005957.1_331	497	178	0.0013	14.8	330641	332131	SEQF2721.1|CP005957.1	331	0.1267605633802817	0.39325842696629215	-1
Cas3_2_CAS-I	SEQF2721.1|CP005957.1_44	692	967	1.8e-06	22.2	45009	47084	SEQF2721.1|CP005957.1	44	0.10549132947976879	0.07238883143743537	-1
Cas3d_0_CAS-I-D	SEQF2721.1|CP005957.1_85	657	639	0.00018	15.9	88449	90419	SEQF2721.1|CP005957.1	85	0.1780821917808219	0.16588419405320814	-1
Cas4_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_906	1097	179	0.0004	16.6	892577	895867	SEQF2721.1|CP005957.1	906	0.07839562443026436	0.41899441340782123	-1
Cas4_0_I-II	SEQF2721.1|CP005957.1_906	1097	180	0.00017	17.4	892577	895867	SEQF2721.1|CP005957.1	906	0.06198723792160438	0.32222222222222224	-1
Cas4_5_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_111	498	161	0.00083	15.5	112768	114261	SEQF2721.1|CP005957.1	111	0.10642570281124498	0.3105590062111801	-1
Cas5_0_IB	SEQF2721.1|CP005957.1_760	452	217	0.0042	12.6	753307	754662	SEQF2721.1|CP005957.1	760	0.11946902654867257	0.24423963133640553	1
Cas7f_0_CAS-I-F	SEQF2721.1|CP005957.1_812	297	340	0.00021	16.7	799130	800020	SEQF2721.1|CP005957.1	812	0.21885521885521886	0.18823529411764706	1
Cas9_0_II-C2	SEQF2721.1|CP005957.1_457	397	967	0.0003	15.0	449518	450708	SEQF2721.1|CP005957.1	457	0.15869017632241814	0.05687693898655636	-1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_416	90	198	2.6e-06	23.1	407629	407898	SEQF2721.1|CP005957.1	416	0.5555555555555556	0.25252525252525254	-1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_717	104	198	0.0001	17.9	716065	716376	SEQF2721.1|CP005957.1	717	0.4423076923076923	0.22727272727272727	1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_836	277	198	0.00091	14.8	824503	825333	SEQF2721.1|CP005957.1	836	0.19494584837545126	0.2676767676767677	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_416	90	218	1.6e-06	23.4	407629	407898	SEQF2721.1|CP005957.1	416	0.5555555555555556	0.22935779816513763	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_630	330	218	0.0025	12.9	622122	623111	SEQF2721.1|CP005957.1	630	0.21212121212121213	0.22018348623853212	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_717	104	218	0.00024	16.3	716065	716376	SEQF2721.1|CP005957.1	717	0.4326923076923077	0.2018348623853211	1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_836	277	218	0.00013	17.1	824503	825333	SEQF2721.1|CP005957.1	836	0.20216606498194944	0.25229357798165136	-1
CorA_0_CAS-III-B-III-D	SEQF2721.1|CP005957.1_231	308	551	0.00015	16.6	228086	229009	SEQF2721.1|CP005957.1	231	0.20454545454545456	0.1088929219600726	1
CorA_1_CAS-III-B	SEQF2721.1|CP005957.1_636	155	125	0.015	11.2	629425	629889	SEQF2721.1|CP005957.1	636	0.5225806451612903	0.648	-1
CorA_1_CAS-III-B	SEQF2721.1|CP005957.1_874	141	125	0.00022	17.1	867542	867964	SEQF2721.1|CP005957.1	874	0.20567375886524822	0.232	-1
Csa3_1_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_717	104	118	0.0075	12.6	716065	716376	SEQF2721.1|CP005957.1	717	0.38461538461538464	0.3644067796610169	1
Cse2gr11_3_CAS-I-E	SEQF2721.1|CP005957.1_47	308	205	0.0008	15.1	51361	52284	SEQF2721.1|CP005957.1	47	0.16558441558441558	0.24878048780487805	-1
Cse2gr11_5_CAS-I-E	SEQF2721.1|CP005957.1_231	308	199	0.0018	13.9	228086	229009	SEQF2721.1|CP005957.1	231	0.21103896103896103	0.3417085427135678	1
Csf4_0_IVA	SEQF2721.1|CP005957.1_1041	456	666	5.7e-05	17.8	999906	1001273	SEQF2721.1|CP005957.1	1041	0.14473684210526316	0.09759759759759759	1
Csf4_1_IVA1	SEQF2721.1|CP005957.1_132	883	802	0.0009	13.4	131774	134422	SEQF2721.1|CP005957.1	132	0.09173272933182333	0.10349127182044887	1
Csf4_1_IVA1	SEQF2721.1|CP005957.1_715	646	802	8.6e-05	16.8	713342	715279	SEQF2721.1|CP005957.1	715	0.11919504643962849	0.09600997506234414	-1
Csn2_10_CAS-II-A	SEQF2721.1|CP005957.1_259	937	321	0.015	10.4	251553	254363	SEQF2721.1|CP005957.1	259	0.051227321237993596	0.1526479750778816	-1
Csn2_7_CAS-II-A	SEQF2721.1|CP005957.1_771	228	372	0.0024	12.8	766672	767355	SEQF2721.1|CP005957.1	771	0.3684210526315789	0.23387096774193547	1
Csx10_1_IIID	SEQF2721.1|CP005957.1_418	436	390	0.012	10.3	408739	410046	SEQF2721.1|CP005957.1	418	0.11238532110091744	0.13076923076923078	-1
Csx16_0_CAS-III-B	SEQF2721.1|CP005957.1_660	588	105	0.0077	12.8	652182	653945	SEQF2721.1|CP005957.1	660	0.09863945578231292	0.5523809523809524	1
Csx18_0_CAS-I-III	SEQF2721.1|CP005957.1_226	127	96	5.5	3.0	223780	224160	SEQF2721.1|CP005957.1	226	0.33070866141732286	0.375	-1
Csx1_19_CAS-III	SEQF2721.1|CP005957.1_316	117	211	0.0037	13.0	314507	314857	SEQF2721.1|CP005957.1	316	0.48717948717948717	0.2796208530805687	-1
Csx1_8_CAS-III	SEQF2721.1|CP005957.1_405	304	219	0.0063	12.1	397191	398102	SEQF2721.1|CP005957.1	405	0.13486842105263158	0.1872146118721461	-1
Csx3_2_CAS-I-III	SEQF2721.1|CP005957.1_6	181	277	0.004	12.3	2246	2788	SEQF2721.1|CP005957.1	6	0.11049723756906077	0.07220216606498195	-1
Csx3_2_CAS-I-III	SEQF2721.1|CP005957.1_680	299	277	0.0048	12.0	671482	672378	SEQF2721.1|CP005957.1	680	0.08695652173913043	0.09386281588447654	1
Csx3_2_CAS-I-III	SEQF2721.1|CP005957.1_839	504	277	1.7e-05	20.1	826809	828320	SEQF2721.1|CP005957.1	839	0.16666666666666666	0.17328519855595667	-1
Csx3_2_CAS-I-III	SEQF2721.1|CP005957.1_979	185	277	0.0081	11.2	962181	962735	SEQF2721.1|CP005957.1	979	0.14054054054054055	0.09386281588447654	-1
Csy3_0_IF	SEQF2721.1|CP005957.1_812	297	341	0.0019	13.6	799130	800020	SEQF2721.1|CP005957.1	812	0.21885521885521886	0.187683284457478	1
CysH_0_IVB	SEQF2721.1|CP005957.1_270	347	249	0.00031	16.4	266593	267633	SEQF2721.1|CP005957.1	270	0.11239193083573487	0.1566265060240964	-1
CysH_0_IVB	SEQF2721.1|CP005957.1_368	290	249	0.0015	14.2	368189	369058	SEQF2721.1|CP005957.1	368	0.18620689655172415	0.21285140562248997	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_261	472	160	3.1e-18	62.4	254771	256186	SEQF2721.1|CP005957.1	261	0.3834745762711864	0.98125	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_594	186	160	3e-10	36.4	586925	587482	SEQF2721.1|CP005957.1	594	0.8440860215053764	0.94375	1
HTH_0_CAS-III-A	SEQF2721.1|CP005957.1_1044	174	364	0.0014	13.8	1003450	1003971	SEQF2721.1|CP005957.1	1044	0.47701149425287354	0.17032967032967034	-1
Mem_DnaJ_0_CAS-III-AM	SEQF2721.1|CP005957.1_335	410	284	0.011	11.0	334998	336227	SEQF2721.1|CP005957.1	335	0.2804878048780488	0.4014084507042254	1
NYN_0_CAS-III-B	SEQF2721.1|CP005957.1_788	178	320	4.3e-05	18.8	780660	781193	SEQF2721.1|CP005957.1	788	0.6966292134831461	0.38125	1
RT_0_CAS-I-E	SEQF2721.1|CP005957.1_831	345	414	1.9e-07	26.2	819705	820739	SEQF2721.1|CP005957.1	831	0.42318840579710143	0.3357487922705314	1
RT_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_179	287	213	3.1e-20	68.6	174269	175129	SEQF2721.1|CP005957.1	179	0.6376306620209059	0.9295774647887324	1
RT_0_CAS-I-II-III-IV-V-VI	SEQF2721.1|CP005957.1_831	345	213	4.6e-18	61.6	819705	820739	SEQF2721.1|CP005957.1	831	0.5826086956521739	0.9624413145539906	1
RT_0_CAS-III-AM-III-B	SEQF2721.1|CP005957.1_179	287	298	2.7e-09	32.3	174269	175129	SEQF2721.1|CP005957.1	179	0.4843205574912892	0.4899328859060403	1
RT_0_CAS-III-AM-III-B	SEQF2721.1|CP005957.1_831	345	298	2.8e-42	140.6	819705	820739	SEQF2721.1|CP005957.1	831	0.808695652173913	0.9563758389261745	1
RecD_0_IVD	SEQF2721.1|CP005957.1_256	865	763	0.0045	11.0	247275	249869	SEQF2721.1|CP005957.1	256	0.06127167630057803	0.07339449541284404	-1
RecD_0_IVD	SEQF2721.1|CP005957.1_282	724	763	0.00027	15.1	276306	278477	SEQF2721.1|CP005957.1	282	0.22513812154696133	0.19003931847968544	-1
RecD_0_IVD	SEQF2721.1|CP005957.1_661	357	763	0.0049	10.9	653958	655028	SEQF2721.1|CP005957.1	661	0.1092436974789916	0.04849279161205767	1
RecD_0_IVD	SEQF2721.1|CP005957.1_805	511	763	1.3e-14	49.2	791583	793115	SEQF2721.1|CP005957.1	805	0.42661448140900193	0.27522935779816515	1
Unk_02_0_CAS-III-A-III-B	SEQF2721.1|CP005957.1_874	141	261	0.0028	12.9	867542	867964	SEQF2721.1|CP005957.1	874	0.6879432624113475	0.36398467432950193	-1
Unk_03_0_CAS-III-B	SEQF2721.1|CP005957.1_635	261	186	0.0038	13.2	628659	629441	SEQF2721.1|CP005957.1	635	0.36015325670498083	0.5053763440860215	-1
htpX_0_CAS-III-B	SEQF2721.1|CP005957.1_217	294	343	4.1e-18	61.6	214795	215676	SEQF2721.1|CP005957.1	217	0.5952380952380952	0.521865889212828	-1