Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_144	228	284	5.8e-06	21.9	78396	79079	SEQF2779.1|CP000925.1	144	0.6096491228070176	0.46830985915492956	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_190	369	284	0.0014	14.1	108130	109236	SEQF2779.1|CP000925.1	190	0.25474254742547425	0.30633802816901406	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_255	381	284	0.0037	12.7	145051	146193	SEQF2779.1|CP000925.1	255	0.32020997375328086	0.43661971830985913	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_349	215	284	0.0013	14.2	201157	201801	SEQF2779.1|CP000925.1	349	0.24186046511627907	0.2007042253521127	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_357	271	284	0.0012	14.3	204998	205810	SEQF2779.1|CP000925.1	357	0.23616236162361623	0.22887323943661972	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_379	110	284	0.0049	12.3	216887	217216	SEQF2779.1|CP000925.1	379	0.3181818181818182	0.14084507042253522	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_641	150	284	2.5e-05	19.9	368461	368910	SEQF2779.1|CP000925.1	641	0.37333333333333335	0.18661971830985916	-1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_648	358	284	0.00011	17.7	373306	374379	SEQF2779.1|CP000925.1	648	0.26536312849162014	0.323943661971831	-1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_649	271	284	0.001	14.6	374361	375173	SEQF2779.1|CP000925.1	649	0.23247232472324722	0.21830985915492956	-1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_782	308	284	5e-06	22.1	457727	458650	SEQF2779.1|CP000925.1	782	0.1525974025974026	0.16549295774647887	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_881	115	284	0.00043	15.8	514947	515291	SEQF2779.1|CP000925.1	881	0.5652173913043478	0.21830985915492956	-1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_92	108	284	0.0037	12.7	49840	50163	SEQF2779.1|CP000925.1	92	0.2222222222222222	0.08098591549295775	1
AbiEii_0_CAS-III	SEQF2779.1|CP000925.1_995	283	284	4.7e-05	18.9	579251	580099	SEQF2779.1|CP000925.1	995	0.46996466431095407	0.4507042253521127	-1
AbiEii_1_CAS-III-A	SEQF2779.1|CP000925.1_641	150	335	0.0018	13.3	368461	368910	SEQF2779.1|CP000925.1	641	0.24666666666666667	0.10746268656716418	-1
Cas11b_1_CAS-I-B	SEQF2779.1|CP000925.1_112	308	162	0.0034	13.2	59740	60663	SEQF2779.1|CP000925.1	112	0.2662337662337662	0.4876543209876543	1
Cas12a_1_CAS-V-A	SEQF2779.1|CP000925.1_265	104	1086	0.81	3.3	151074	151385	SEQF2779.1|CP000925.1	265	0.8365384615384616	0.04419889502762431	1
Cas12j_0_V-J	SEQF2779.1|CP000925.1_455	68	758	0.0076	10.0	266249	266452	SEQF2779.1|CP000925.1	455	0.6617647058823529	0.059366754617414245	-1
Cas1_0_I-II-III-V	SEQF2779.1|CP000925.1_333	145	315	0.0047	11.7	193351	193785	SEQF2779.1|CP000925.1	333	0.31724137931034485	0.14285714285714285	1
Cas3HD_0_CAS-I	SEQF2779.1|CP000925.1_274	431	203	4.5e-06	22.5	156623	157915	SEQF2779.1|CP000925.1	274	0.3619489559164733	0.7931034482758621	1
Cas3HD_0_CAS-I	SEQF2779.1|CP000925.1_486	134	203	0.0024	13.6	286236	286637	SEQF2779.1|CP000925.1	486	0.26119402985074625	0.21182266009852216	-1
Cas3HD_0_CAS-I	SEQF2779.1|CP000925.1_977	253	203	0.0015	14.2	568341	569099	SEQF2779.1|CP000925.1	977	0.17391304347826086	0.22660098522167488	-1
Cas3_0_CAS-I	SEQF2779.1|CP000925.1_773	295	353	0.00027	16.0	451993	452877	SEQF2779.1|CP000925.1	773	0.46779661016949153	0.35410764872521244	-1
Cas3_0_CAS-I	SEQF2779.1|CP000925.1_915	113	353	7.8e-07	24.3	534563	534901	SEQF2779.1|CP000925.1	915	0.5221238938053098	0.16147308781869688	1
Cas3_0_CAS-I	SEQF2779.1|CP000925.1_916	316	353	2.7e-07	25.9	534950	535897	SEQF2779.1|CP000925.1	916	0.6582278481012658	0.5835694050991501	1
Cas3_0_CAS-I-D	SEQF2779.1|CP000925.1_915	113	626	0.00028	15.1	534563	534901	SEQF2779.1|CP000925.1	915	0.7256637168141593	0.12140575079872204	1
Cas3_0_CAS-I-D	SEQF2779.1|CP000925.1_916	316	626	4.9e-06	20.8	534950	535897	SEQF2779.1|CP000925.1	916	0.27848101265822783	0.14057507987220447	1
Cas3_0_I	SEQF2779.1|CP000925.1_773	295	358	0.00026	16.0	451993	452877	SEQF2779.1|CP000925.1	773	0.46779661016949153	0.3575418994413408	-1
Cas3_0_I	SEQF2779.1|CP000925.1_782	308	358	0.00063	14.8	457727	458650	SEQF2779.1|CP000925.1	782	0.4805194805194805	0.40782122905027934	1
Cas3_0_I	SEQF2779.1|CP000925.1_915	113	358	7.1e-06	21.2	534563	534901	SEQF2779.1|CP000925.1	915	0.5132743362831859	0.15921787709497207	1
Cas3_0_ID	SEQF2779.1|CP000925.1_915	113	357	0.00028	15.9	534563	534901	SEQF2779.1|CP000925.1	915	0.4778761061946903	0.13165266106442577	1
Cas3_0_IU	SEQF2779.1|CP000925.1_916	316	864	0.0019	12.0	534950	535897	SEQF2779.1|CP000925.1	916	0.3575949367088608	0.15046296296296297	1
Cas3_1_CAS-I	SEQF2779.1|CP000925.1_915	113	745	5.4e-08	27.4	534563	534901	SEQF2779.1|CP000925.1	915	0.831858407079646	0.1342281879194631	1
Cas3_1_CAS-I-D	SEQF2779.1|CP000925.1_915	113	353	2.6e-05	19.3	534563	534901	SEQF2779.1|CP000925.1	915	0.49557522123893805	0.1388101983002833	1
Cas3_1_I	SEQF2779.1|CP000925.1_274	431	178	0.00097	15.1	156623	157915	SEQF2779.1|CP000925.1	274	0.2088167053364269	0.6685393258426966	1
Cas3_1_I	SEQF2779.1|CP000925.1_486	134	178	0.0011	14.9	286236	286637	SEQF2779.1|CP000925.1	486	0.26119402985074625	0.23595505617977527	-1
Cas3_2_CAS-I	SEQF2779.1|CP000925.1_915	113	967	5.3e-06	20.6	534563	534901	SEQF2779.1|CP000925.1	915	0.6991150442477876	0.0796277145811789	1
Cas3d_0_CAS-I-D	SEQF2779.1|CP000925.1_915	113	639	0.0021	12.3	534563	534901	SEQF2779.1|CP000925.1	915	0.4247787610619469	0.07355242566510173	1
Cas3d_1_CAS-I-D	SEQF2779.1|CP000925.1_915	113	627	0.0002	15.6	534563	534901	SEQF2779.1|CP000925.1	915	0.45132743362831856	0.0685805422647528	1
Cas6_0_IVA3	SEQF2779.1|CP000925.1_421	123	189	0.0099	11.5	240001	240369	SEQF2779.1|CP000925.1	421	0.3170731707317073	0.20634920634920634	1
Cas6_5_CAS-I-II-III-IV-V-VI	SEQF2779.1|CP000925.1_222	184	219	0.0018	13.7	126759	127310	SEQF2779.1|CP000925.1	222	0.5543478260869565	0.4931506849315068	1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF2779.1|CP000925.1_782	308	198	0.00011	17.8	457727	458650	SEQF2779.1|CP000925.1	782	0.2077922077922078	0.3181818181818182	1
CasR_0_CAS-III-B-III-D	SEQF2779.1|CP000925.1_218	246	255	0.29	6.4	124474	125211	SEQF2779.1|CP000925.1	218	0.5040650406504065	0.27058823529411763	1
CasR_0_CAS-III-B-III-D	SEQF2779.1|CP000925.1_652	91	255	2.3	3.5	378083	378355	SEQF2779.1|CP000925.1	652	0.8131868131868132	0.26666666666666666	-1
CasR_0_CAS-III-B-III-D	SEQF2779.1|CP000925.1_968	93	255	0.0048	12.3	562559	562837	SEQF2779.1|CP000925.1	968	0.8602150537634409	0.3137254901960784	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF2779.1|CP000925.1_782	308	218	2.4e-05	19.5	457727	458650	SEQF2779.1|CP000925.1	782	0.18181818181818182	0.26605504587155965	1
CasR_1_CAS-III-D	SEQF2779.1|CP000925.1_107	241	493	0.00064	14.4	57194	57916	SEQF2779.1|CP000925.1	107	0.3153526970954357	0.15415821501014199	-1
Cmr5gr11_1_CAS-III-C	SEQF2779.1|CP000925.1_725	173	180	0.06	9.0	425067	425585	SEQF2779.1|CP000925.1	725	0.6936416184971098	0.43333333333333335	-1
Cmr6gr7_2_CAS-III-B-III-C	SEQF2779.1|CP000925.1_490	162	262	0.013	10.9	287923	288408	SEQF2779.1|CP000925.1	490	0.8765432098765432	0.3473282442748092	1
CorA_1_CAS-III-B	SEQF2779.1|CP000925.1_436	133	125	0.00068	15.5	251172	251570	SEQF2779.1|CP000925.1	436	0.7969924812030075	0.544	1
Csa5_0_IA	SEQF2779.1|CP000925.1_507	172	107	0.005	13.0	296287	296802	SEQF2779.1|CP000925.1	507	0.5	0.794392523364486	-1
Csa5gr11_4_CAS-I-A	SEQF2779.1|CP000925.1_436	133	136	0.0052	12.7	251172	251570	SEQF2779.1|CP000925.1	436	0.6616541353383458	0.49264705882352944	1
Csf1_2_IVA3	SEQF2779.1|CP000925.1_413	182	267	0.00029	16.1	235691	236236	SEQF2779.1|CP000925.1	413	0.5164835164835165	0.352059925093633	1
Csf2_1_IVA3	SEQF2779.1|CP000925.1_484	422	263	0.011	10.8	284692	285957	SEQF2779.1|CP000925.1	484	0.35308056872037913	0.49429657794676807	1
Csf4_0_IVA	SEQF2779.1|CP000925.1_915	113	666	0.00044	14.8	534563	534901	SEQF2779.1|CP000925.1	915	0.4247787610619469	0.06906906906906907	1
Csn2_10_CAS-II-A	SEQF2779.1|CP000925.1_903	545	321	0.0045	12.0	527045	528679	SEQF2779.1|CP000925.1	903	0.11192660550458716	0.19003115264797507	-1
Csn2_5_CAS-II-A	SEQF2779.1|CP000925.1_916	316	223	0.0022	13.6	534950	535897	SEQF2779.1|CP000925.1	916	0.25	0.2556053811659193	1
Csn2_7_CAS-II-A	SEQF2779.1|CP000925.1_358	305	372	2.2e-05	19.4	205807	206721	SEQF2779.1|CP000925.1	358	0.3704918032786885	0.3118279569892473	1
Csn2_7_CAS-II-A	SEQF2779.1|CP000925.1_649	271	372	0.00018	16.5	374361	375173	SEQF2779.1|CP000925.1	649	0.4132841328413284	0.260752688172043	-1
Csx1_0_CAS-III	SEQF2779.1|CP000925.1_625	145	396	0.00026	16.2	359711	360145	SEQF2779.1|CP000925.1	625	0.6068965517241379	0.19696969696969696	-1
Csx1_5_CAS-III	SEQF2779.1|CP000925.1_9	837	132	0.0037	13.3	4812	7322	SEQF2779.1|CP000925.1	9	0.1863799283154122	0.7196969696969697	1
Csx1_6_CAS-III	SEQF2779.1|CP000925.1_543	77	406	0.00057	15.0	315784	316014	SEQF2779.1|CP000925.1	543	0.5974025974025974	0.0960591133004926	1
Csx3_2_CAS-I-III	SEQF2779.1|CP000925.1_552	93	277	0.008	11.2	321363	321641	SEQF2779.1|CP000925.1	552	0.3763440860215054	0.1263537906137184	1
Csx3_2_CAS-I-III	SEQF2779.1|CP000925.1_701	449	277	7.4e-05	17.8	413353	414699	SEQF2779.1|CP000925.1	701	0.22494432071269488	0.2527075812274368	-1
Csx3_2_CAS-I-III	SEQF2779.1|CP000925.1_830	327	277	3.6e-05	18.9	482631	483611	SEQF2779.1|CP000925.1	830	0.11926605504587157	0.1407942238267148	-1
CysH_0_IVB	SEQF2779.1|CP000925.1_195	71	249	0.0009	14.9	110974	111186	SEQF2779.1|CP000925.1	195	0.5352112676056338	0.1606425702811245	1
CysH_0_IVB	SEQF2779.1|CP000925.1_634	91	249	0.0035	12.9	364131	364403	SEQF2779.1|CP000925.1	634	0.4835164835164835	0.17269076305220885	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2779.1|CP000925.1_61	225	160	0.005	12.9	34435	35109	SEQF2779.1|CP000925.1	61	0.16	0.225	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	SEQF2779.1|CP000925.1_62	156	160	1.7000000000000002e-32	108.7	35113	35580	SEQF2779.1|CP000925.1	62	0.7435897435897436	0.725	-1
HTH_0_CAS-III-B	SEQF2779.1|CP000925.1_28	205	217	0.0024	13.4	17800	18414	SEQF2779.1|CP000925.1	28	0.28292682926829266	0.2626728110599078	1
Mem_DnaJ_0_CAS-III-AM	SEQF2779.1|CP000925.1_35	390	284	6.1e-08	28.2	22389	23558	SEQF2779.1|CP000925.1	35	0.1564102564102564	0.2147887323943662	1
RecD_0_IVD	SEQF2779.1|CP000925.1_915	113	763	0.00057	13.9	534563	534901	SEQF2779.1|CP000925.1	915	0.6902654867256637	0.09567496723460026	1
STAND_TPR_0_CAS-I-E	SEQF2779.1|CP000925.1_775	213	1210	0.0018	12.1	453499	454137	SEQF2779.1|CP000925.1	775	0.4413145539906103	0.07355371900826446	-1