Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	SEQF3731.1|SDSA01000012.1_6	241	284	7.4e-10	33.7	8144	8866	SEQF3731.1|SDSA01000012.1	6	0.6804979253112033	0.5669014084507042	-1
AbiEii_0_CAS-III	SEQF3731.1|SDSA01000016.1_3	666	284	0.00024	15.7	1669	3666	SEQF3731.1|SDSA01000016.1	3	0.12612612612612611	0.2992957746478873	-1
AbiEii_0_CAS-III	SEQF3731.1|SDSA01000026.1_1	515	284	0.0018	12.8	3	1547	SEQF3731.1|SDSA01000026.1	1	0.15728155339805824	0.29225352112676056	-1
AbiEii_0_CAS-III	SEQF3731.1|SDSA01000029.1_4	388	284	0.00088	13.8	2865	4028	SEQF3731.1|SDSA01000029.1	4	0.327319587628866	0.43309859154929575	-1
AbiEii_0_CAS-III	SEQF3731.1|SDSA01000038.1_5	455	284	7.5e-05	17.3	2041	3405	SEQF3731.1|SDSA01000038.1	5	0.2725274725274725	0.44014084507042256	-1
AbiEii_1_CAS-III-A	SEQF3731.1|SDSA01000012.1_6	241	335	3.4e-05	18.0	8144	8866	SEQF3731.1|SDSA01000012.1	6	0.38589211618257263	0.28955223880597014	-1
AbiEii_2_CAS-III-C	SEQF3731.1|SDSA01000012.1_6	241	440	0.0017	12.6	8144	8866	SEQF3731.1|SDSA01000012.1	6	0.34854771784232363	0.19318181818181818	-1
Cas1_0_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	317	3.7e-45	149.3	839	1717	SEQF3731.1|SDSA01000022.1	2	0.7849829351535836	0.7854889589905363	1
Cas1_0_I-II-III	SEQF3731.1|SDSA01000022.1_2	293	327	1.6000000000000001e-27	91.3	839	1717	SEQF3731.1|SDSA01000022.1	2	0.7849829351535836	0.7767584097859327	1
Cas1_0_I-II-III-V	SEQF3731.1|SDSA01000022.1_2	293	315	1.5e-34	114.1	839	1717	SEQF3731.1|SDSA01000022.1	2	0.7815699658703071	0.7841269841269841	1
Cas1_0_IA	SEQF3731.1|SDSA01000022.1_2	293	347	3.9e-07	24.2	839	1717	SEQF3731.1|SDSA01000022.1	2	0.29692832764505117	0.25360230547550433	1
Cas1_0_IC	SEQF3731.1|SDSA01000022.1_2	293	340	5.9e-09	30.4	839	1717	SEQF3731.1|SDSA01000022.1	2	0.22184300341296928	0.19411764705882353	1
Cas1_0_IE	SEQF3731.1|SDSA01000022.1_2	293	269	0.00018	15.7	839	1717	SEQF3731.1|SDSA01000022.1	2	0.15358361774744028	0.16728624535315986	1
Cas1_0_II	SEQF3731.1|SDSA01000022.1_2	293	278	1.6e-93	307.9	839	1717	SEQF3731.1|SDSA01000022.1	2	0.9283276450511946	0.9964028776978417	1
Cas1_0_V	SEQF3731.1|SDSA01000022.1_2	293	317	2.5e-17	57.8	839	1717	SEQF3731.1|SDSA01000022.1	2	0.9283276450511946	0.9242902208201893	1
Cas1_1_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	261	3.3e-25	83.8	839	1717	SEQF3731.1|SDSA01000022.1	2	0.7679180887372014	0.946360153256705	1
Cas1_3_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	262	0.00017	15.8	839	1717	SEQF3731.1|SDSA01000022.1	2	0.15358361774744028	0.1717557251908397	1
Cas1_4_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	275	7.3e-93	305.6	839	1717	SEQF3731.1|SDSA01000022.1	2	0.9249146757679181	0.9963636363636363	1
Cas1_5_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	338	3.6e-09	31.1	839	1717	SEQF3731.1|SDSA01000022.1	2	0.22184300341296928	0.1952662721893491	1
Cas1_6_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	320	3.2e-08	28.1	839	1717	SEQF3731.1|SDSA01000022.1	2	0.757679180887372	0.740625	1
Cas1_7_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	328	1.1e-48	160.9	839	1717	SEQF3731.1|SDSA01000022.1	2	0.8600682593856656	0.8262195121951219	1
Cas1_8_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_2	293	283	2.9e-25	83.9	839	1717	SEQF3731.1|SDSA01000022.1	2	0.7713310580204779	0.8692579505300353	1
Cas2_0_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_3	102	90	2.3e-20	67.8	1735	2040	SEQF3731.1|SDSA01000022.1	3	0.8627450980392157	0.9333333333333333	1
Cas2_0_I-II-III	SEQF3731.1|SDSA01000022.1_3	102	96	5e-21	69.7	1735	2040	SEQF3731.1|SDSA01000022.1	3	0.8921568627450981	0.9270833333333334	1
Cas2_11_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_3	102	71	1.4e-15	52.2	1735	2040	SEQF3731.1|SDSA01000022.1	3	0.7549019607843137	1.0	1
Cas2_5_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_3	102	116	8.2e-33	108.1	1735	2040	SEQF3731.1|SDSA01000022.1	3	0.9705882352941176	0.8706896551724138	1
Cas2_9_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000022.1_3	102	101	1.1000000000000001e-30	100.8	1735	2040	SEQF3731.1|SDSA01000022.1	3	0.9901960784313726	1.0	1
Cas3HD_0_CAS-I	SEQF3731.1|SDSA01000006.1_1	497	203	0.0027	12.5	138	1628	SEQF3731.1|SDSA01000006.1	1	0.16901408450704225	0.49261083743842365	-1
Cas3_0_CAS-I	SEQF3731.1|SDSA01000003.1_5	734	353	2e-07	25.4	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.21525885558583105	0.42776203966005666	1
Cas3_0_CAS-I	SEQF3731.1|SDSA01000060.1_2	422	353	0.0023	12.0	765	2030	SEQF3731.1|SDSA01000060.1	2	0.10426540284360189	0.11331444759206799	-1
Cas3_0_I	SEQF3731.1|SDSA01000003.1_5	734	358	1.8e-07	25.5	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.21389645776566757	0.41899441340782123	1
Cas3_0_ID	SEQF3731.1|SDSA01000003.1_5	734	357	4.9e-05	17.5	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.1539509536784741	0.3137254901960784	1
Cas3_1_CAS-I	SEQF3731.1|SDSA01000003.1_5	734	745	2.1e-08	27.9	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.14850136239782016	0.13557046979865772	1
Cas3_1_CAS-I-D	SEQF3731.1|SDSA01000003.1_5	734	353	0.00012	16.2	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.1444141689373297	0.29745042492917845	1
Cas3_1_I	SEQF3731.1|SDSA01000006.1_1	497	178	0.0014	13.6	138	1628	SEQF3731.1|SDSA01000006.1	1	0.158953722334004	0.46629213483146065	-1
Cas3_2_CAS-I	SEQF3731.1|SDSA01000003.1_5	734	967	1e-05	18.7	5246	7447	SEQF3731.1|SDSA01000003.1	5	0.09264305177111716	0.06618407445708377	1
Cas7_1_IB	SEQF3731.1|SDSA01000036.1_2	305	321	0.0024	11.8	1059	1973	SEQF3731.1|SDSA01000036.1	2	0.24918032786885247	0.1806853582554517	1
CasR_0_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000006.1_11	237	198	0.00024	15.7	11394	12104	SEQF3731.1|SDSA01000006.1	11	0.12658227848101267	0.15656565656565657	-1
CasR_1_CAS-I-II-III-IV-V-VI	SEQF3731.1|SDSA01000006.1_11	237	218	0.00032	14.9	11394	12104	SEQF3731.1|SDSA01000006.1	11	0.11814345991561181	0.12844036697247707	-1
CorA_0_CAS-III-B-III-D	SEQF3731.1|SDSA01000036.1_2	305	551	6.2e-07	23.4	1059	1973	SEQF3731.1|SDSA01000036.1	2	0.24262295081967214	0.12885662431941924	1
CorA_1_CAS-III-B	SEQF3731.1|SDSA01000003.1_14	169	125	0.011	10.6	14044	14550	SEQF3731.1|SDSA01000003.1	14	0.7692307692307693	0.456	-1
CorA_1_CAS-III-B	SEQF3731.1|SDSA01000015.1_19	179	125	0.0014	13.5	8972	9508	SEQF3731.1|SDSA01000015.1	19	0.6089385474860335	0.544	-1
CorA_1_CAS-III-B	SEQF3731.1|SDSA01000043.1_6	181	125	0.0033	12.3	2101	2643	SEQF3731.1|SDSA01000043.1	6	0.6353591160220995	0.68	1
Csn2_0_CAS-II-A	SEQF3731.1|SDSA01000022.1_4	230	223	1.3000000000000001e-32	108.0	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.9652173913043478	0.9865470852017937	1
Csn2_0_IIA	SEQF3731.1|SDSA01000022.1_4	230	222	8.2e-33	108.8	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.9652173913043478	0.990990990990991	1
Csn2_13_CAS-II-A	SEQF3731.1|SDSA01000022.1_4	230	180	1.6000000000000002e-22	75.0	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.7521739130434782	0.9666666666666667	1
Csn2_1_CAS-II-A	SEQF3731.1|SDSA01000022.1_4	230	218	1.9e-17	58.6	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.8347826086956521	0.8486238532110092	1
Csn2_3_CAS-II-A	SEQF3731.1|SDSA01000022.1_4	230	219	2.5e-20	68.0	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.9130434782608695	0.9452054794520548	1
Csn2_5_CAS-II-A	SEQF3731.1|SDSA01000022.1_4	230	223	8.9e-07	23.7	2037	2726	SEQF3731.1|SDSA01000022.1	4	0.908695652173913	0.9237668161434978	1
Csx15_0_CAS-I-III	SEQF3731.1|SDSA01000010.1_6	255	101	0.0029	12.4	6144	6908	SEQF3731.1|SDSA01000010.1	6	0.08627450980392157	0.21782178217821782	1
Csx1_7_CAS-III	SEQF3731.1|SDSA01000008.1_8	225	309	0.034	8.6	9403	10077	SEQF3731.1|SDSA01000008.1	8	0.3466666666666667	0.29449838187702265	-1
Csx1_7_CAS-III	SEQF3731.1|SDSA01000011.1_5	198	309	0.36	5.2	5932	6525	SEQF3731.1|SDSA01000011.1	5	0.51010101010101	0.3268608414239482	-1
Csx3_2_CAS-I-III	SEQF3731.1|SDSA01000024.1_3	307	277	0.00011	16.3	680	1600	SEQF3731.1|SDSA01000024.1	3	0.13355048859934854	0.1407942238267148	1
RecD_0_IVD	SEQF3731.1|SDSA01000001.1_3	1142	763	0.0011	12.0	2787	6212	SEQF3731.1|SDSA01000001.1	3	0.1287215411558669	0.16382699868938402	1
RecD_0_IVD	SEQF3731.1|SDSA01000012.1_6	241	763	0.0019	11.2	8144	8866	SEQF3731.1|SDSA01000012.1	6	0.34024896265560167	0.10615989515072084	-1
RecD_0_IVD	SEQF3731.1|SDSA01000060.1_2	422	763	1.3e-20	68.0	765	2030	SEQF3731.1|SDSA01000060.1	2	0.5450236966824644	0.2857142857142857	-1
Unk_05_0_CAS-I-B	SEQF3731.1|SDSA01000010.1_10	72	195	0.0013	13.5	13718	13933	SEQF3731.1|SDSA01000010.1	10	0.5138888888888888	0.18974358974358974	-1