Contig	CRISPR	Start	End	Consensus_repeat	N_repeats	Repeat_len	Spacer_len_avg	Repeat_identity	Spacer_identity	Spacer_len_sem	Trusted	Prediction	Subtype	Subtype_probability
SEQF5158.1|MSLA01000008.1	SEQF5158.1|MSLA01000008.1_1	67	968	ACCTTCTGGTGCTGGGTGCTTTCTG	13	25.0	48.1	88.8	51.4	0.4	True	Unknown	III-D	0.27
SEQF5158.1|MSLA01000008.1	SEQF5158.1|MSLA01000008.1_2	1929	2315	CTAGTGGTGCTGGGTGCTTTCTGAC	6	25.0	47.4	87.6	48.9	0.7	True	Unknown	III-B	0.204
SEQF5158.1|MSLA01000015.1	SEQF5158.1|MSLA01000015.1_3	258005	258757	GTCTTAATGCACCTTCTGGTGCT	11	23.0	50.0	100.0	54.6	0.4	True	III-D	III-D	0.938
SEQF5158.1|MSLA01000015.1	SEQF5158.1|MSLA01000015.1_4	275499	275744	TTAATGCACCTTGTGGTGCTGGGTGCT	4	27.0	46.0	86.5	52.7	0.6	True	Unknown	III-D	0.343
SEQF5158.1|MSLA01000015.1	SEQF5158.1|MSLA01000015.1-4_6	274805	275127	GTCTTAATGCACCTTGTGGTGCTGGGCGCTTTCTGAC	5	36.6	35.0	87.2	40.2	1.4	True	III-D	III-D	0.996
SEQF5158.1|MSLA01000015.1	SEQF5158.1|MSLA01000015.1-4_8	276232	276416	GTCTTAATGCACCTCGTGGTGCTGGGTGCTTTCTGAC	3	36.0	38.5	87.8	48.1	0.5	True	III-D	III-D	0.924
SEQF5158.1|MSLA01000008.1	SEQF5158.1|MSLA01000008.1-1_10	1316	1555	TTCTGGTCCTGGGTGCTTTCTGAC	4	33.2	35.7	71.9	42.7	0.9	True	Unknown	III-B	0.26
SEQF5158.1|MSLA01000008.1	SEQF5158.1|MSLA01000008.1-1_12	2684	3005	GTCTTAATGCACCTTGTGGTGCTGGGTGCTTTCTGAC	5	37.0	34.2	92.8	43.3	0.6	True	III-D	III-D	0.995