##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM17733v1 #!genome-build-accession NCBI_Assembly:GCA_000177335.1 ##sequence-region ADFP01000140.1 1 15318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000140.1 Genbank region 1 15318 . + . ID=ADFP01000140.1:1..15318;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000140.1 Genbank gene 50 331 . - . ID=gene-HMPREF7215_2672;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HMPREF7215_2672 GCA_000177335.1|ADFP01000140.1 Genbank CDS 50 331 . - 0 ID=cds-EFB89317.1;Parent=gene-HMPREF7215_2672;Dbxref=NCBI_GP:EFB89317.1;Name=EFB89317.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029;gbkey=CDS;gene=rpsT;locus_tag=HMPREF7215_2672;product=ribosomal protein S20;protein_id=EFB89317.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 525 2465 . + . ID=gene-HMPREF7215_2673;Name=HMPREF7215_2673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2673 GCA_000177335.1|ADFP01000140.1 Genbank CDS 525 2465 . + 0 ID=cds-EFB89318.1;Parent=gene-HMPREF7215_2673;Dbxref=NCBI_GP:EFB89318.1;Name=EFB89318.1;Note=identified by match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF7215_2673;product=helicase C-terminal domain protein;protein_id=EFB89318.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 2576 2710 . + . ID=gene-HMPREF7215_2674;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HMPREF7215_2674 GCA_000177335.1|ADFP01000140.1 Genbank CDS 2576 2710 . + 0 ID=cds-EFB89319.1;Parent=gene-HMPREF7215_2674;Dbxref=NCBI_GP:EFB89319.1;Name=EFB89319.1;Note=identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030;gbkey=CDS;gene=rpmH;locus_tag=HMPREF7215_2674;product=ribosomal protein L34;protein_id=EFB89319.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 2814 3098 . + . ID=gene-HMPREF7215_2675;Name=HMPREF7215_2675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2675 GCA_000177335.1|ADFP01000140.1 Genbank CDS 2814 3098 . + 0 ID=cds-EFB89320.1;Parent=gene-HMPREF7215_2675;Dbxref=NCBI_GP:EFB89320.1;Name=EFB89320.1;Note=3.1.26.5;gbkey=CDS;locus_tag=HMPREF7215_2675;product=hypothetical protein;protein_id=EFB89320.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 3115 3333 . + . ID=gene-HMPREF7215_2676;Name=HMPREF7215_2676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2676 GCA_000177335.1|ADFP01000140.1 Genbank CDS 3115 3333 . + 0 ID=cds-EFB89321.1;Parent=gene-HMPREF7215_2676;Dbxref=NCBI_GP:EFB89321.1;Name=EFB89321.1;Note=identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;locus_tag=HMPREF7215_2676;product=conserved hypothetical protein YidD;protein_id=EFB89321.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 3377 4303 . + . ID=gene-HMPREF7215_2677;Name=HMPREF7215_2677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2677 GCA_000177335.1|ADFP01000140.1 Genbank CDS 3377 4303 . + 0 ID=cds-EFB89322.1;Parent=gene-HMPREF7215_2677;Dbxref=NCBI_GP:EFB89322.1;Name=EFB89322.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592;gbkey=CDS;locus_tag=HMPREF7215_2677;product=membrane protein insertase%2C YidC/Oxa1 family;protein_id=EFB89322.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 4333 5163 . + . ID=gene-HMPREF7215_2678;Name=HMPREF7215_2678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2678 GCA_000177335.1|ADFP01000140.1 Genbank CDS 4333 5163 . + 0 ID=cds-EFB89323.1;Parent=gene-HMPREF7215_2678;Dbxref=NCBI_GP:EFB89323.1;Name=EFB89323.1;Note=identified by match to protein family HMM PF01424;gbkey=CDS;locus_tag=HMPREF7215_2678;product=R3H domain protein;protein_id=EFB89323.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 5279 7192 . - . ID=gene-HMPREF7215_2679;Name=HMPREF7215_2679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2679 GCA_000177335.1|ADFP01000140.1 Genbank CDS 5279 7192 . - 0 ID=cds-EFB89324.1;Parent=gene-HMPREF7215_2679;Dbxref=NCBI_GP:EFB89324.1;Name=EFB89324.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF01738;gbkey=CDS;locus_tag=HMPREF7215_2679;product=peptidase%2C S9A/B/C family%2C catalytic domain protein;protein_id=EFB89324.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 7232 7402 . - . ID=gene-HMPREF7215_2680;Name=HMPREF7215_2680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2680 GCA_000177335.1|ADFP01000140.1 Genbank CDS 7232 7402 . - 0 ID=cds-EFB89325.1;Parent=gene-HMPREF7215_2680;Dbxref=NCBI_GP:EFB89325.1;Name=EFB89325.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2680;product=hypothetical protein;protein_id=EFB89325.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 7421 8356 . + . ID=gene-HMPREF7215_2681;Name=HMPREF7215_2681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2681 GCA_000177335.1|ADFP01000140.1 Genbank CDS 7421 8356 . + 0 ID=cds-EFB89326.1;Parent=gene-HMPREF7215_2681;Dbxref=NCBI_GP:EFB89326.1;Name=EFB89326.1;Note=identified by match to protein family HMM PF01515;gbkey=CDS;locus_tag=HMPREF7215_2681;product=phosphate butyryltransferase;protein_id=EFB89326.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 8451 9485 . + . ID=gene-HMPREF7215_2682;Name=HMPREF7215_2682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2682 GCA_000177335.1|ADFP01000140.1 Genbank CDS 8451 9485 . + 0 ID=cds-EFB89327.1;Parent=gene-HMPREF7215_2682;Dbxref=NCBI_GP:EFB89327.1;Name=EFB89327.1;Note=identified by match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_2682;product=Beta-eliminating lyase;protein_id=EFB89327.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 9593 10729 . - . ID=gene-HMPREF7215_2683;Name=HMPREF7215_2683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2683 GCA_000177335.1|ADFP01000140.1 Genbank CDS 9593 10729 . - 0 ID=cds-EFB89328.1;Parent=gene-HMPREF7215_2683;Dbxref=NCBI_GP:EFB89328.1;Name=EFB89328.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2683;product=hypothetical protein;protein_id=EFB89328.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 10749 12071 . - . ID=gene-HMPREF7215_2684;Name=HMPREF7215_2684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2684 GCA_000177335.1|ADFP01000140.1 Genbank CDS 10749 12071 . - 0 ID=cds-EFB89329.1;Parent=gene-HMPREF7215_2684;Dbxref=NCBI_GP:EFB89329.1;Name=EFB89329.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2684;product=hypothetical protein;protein_id=EFB89329.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 12128 13888 . - . ID=gene-HMPREF7215_2685;Name=HMPREF7215_2685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2685 GCA_000177335.1|ADFP01000140.1 Genbank CDS 12128 13888 . - 0 ID=cds-EFB89330.1;Parent=gene-HMPREF7215_2685;Dbxref=NCBI_GP:EFB89330.1;Name=EFB89330.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2685;product=hypothetical protein;protein_id=EFB89330.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 13904 14035 . + . ID=gene-HMPREF7215_2686;Name=HMPREF7215_2686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2686 GCA_000177335.1|ADFP01000140.1 Genbank CDS 13904 14035 . + 0 ID=cds-EFB89331.1;Parent=gene-HMPREF7215_2686;Dbxref=NCBI_GP:EFB89331.1;Name=EFB89331.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2686;product=hypothetical protein;protein_id=EFB89331.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 14134 14817 . + . ID=gene-HMPREF7215_2687;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2687 GCA_000177335.1|ADFP01000140.1 Genbank CDS 14134 14817 . + 0 ID=cds-EFB89332.1;Parent=gene-HMPREF7215_2687;Dbxref=NCBI_GP:EFB89332.1;Name=EFB89332.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719;gbkey=CDS;gene=sdaAB;locus_tag=HMPREF7215_2687;product=L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit;protein_id=EFB89332.1;transl_table=11 GCA_000177335.1|ADFP01000140.1 Genbank gene 14814 15318 . + . ID=gene-HMPREF7215_2688;Name=HMPREF7215_2688;end_range=15318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2688;partial=true GCA_000177335.1|ADFP01000140.1 Genbank CDS 14814 15318 . + 0 ID=cds-EFB89333.1;Parent=gene-HMPREF7215_2688;Dbxref=NCBI_GP:EFB89333.1;Name=EFB89333.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=15318,.;gbkey=CDS;locus_tag=HMPREF7215_2688;partial=true;product=hypothetical protein;protein_id=EFB89333.1;transl_table=11 ##sequence-region ADFP01000139.1 1 2567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000139.1 Genbank region 1 2567 . + . ID=ADFP01000139.1:1..2567;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000139.1 Genbank gene 1 1675 . - . ID=gene-HMPREF7215_0775;Name=HMPREF7215_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0775;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000139.1 Genbank CDS 1 1675 . - 0 ID=cds-EFB89334.1;Parent=gene-HMPREF7215_0775;Dbxref=NCBI_GP:EFB89334.1;Name=EFB89334.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00580;gbkey=CDS;locus_tag=HMPREF7215_0775;partial=true;product=UvrD/REP helicase;protein_id=EFB89334.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000139.1 Genbank gene 1665 2567 . - . ID=gene-HMPREF7215_0776;Name=HMPREF7215_0776;end_range=2567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0776;partial=true GCA_000177335.1|ADFP01000139.1 Genbank CDS 1665 2567 . - 0 ID=cds-EFB89335.1;Parent=gene-HMPREF7215_0776;Dbxref=NCBI_GP:EFB89335.1;Name=EFB89335.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=2567,.;gbkey=CDS;locus_tag=HMPREF7215_0776;partial=true;product=hypothetical protein;protein_id=EFB89335.1;transl_table=11 ##sequence-region ADFP01000138.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000138.1 Genbank region 1 525 . + . ID=ADFP01000138.1:1..525;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000138.1 Genbank gene 13 219 . + . ID=gene-HMPREF7215_0003;Name=HMPREF7215_0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0003 GCA_000177335.1|ADFP01000138.1 Genbank CDS 13 219 . + 0 ID=cds-EFB89336.1;Parent=gene-HMPREF7215_0003;Dbxref=NCBI_GP:EFB89336.1;Name=EFB89336.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0003;product=hypothetical protein;protein_id=EFB89336.1;transl_table=11 ##sequence-region ADFP01000137.1 1 18184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000137.1 Genbank region 1 18184 . + . ID=ADFP01000137.1:1..18184;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000137.1 Genbank gene 137 1198 . - . ID=gene-HMPREF7215_0829;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0829 GCA_000177335.1|ADFP01000137.1 Genbank CDS 137 1198 . - 0 ID=cds-EFB89337.1;Parent=gene-HMPREF7215_0829;Dbxref=NCBI_GP:EFB89337.1;Name=EFB89337.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR02607;gbkey=CDS;gene=higA;locus_tag=HMPREF7215_0829;product=addiction module antidote protein HigA;protein_id=EFB89337.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 1244 1474 . - . ID=gene-HMPREF7215_0830;Name=HMPREF7215_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0830 GCA_000177335.1|ADFP01000137.1 Genbank CDS 1244 1474 . - 0 ID=cds-EFB89338.1;Parent=gene-HMPREF7215_0830;Dbxref=NCBI_GP:EFB89338.1;Name=EFB89338.1;gbkey=CDS;locus_tag=HMPREF7215_0830;product=hypothetical protein;protein_id=EFB89338.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 1589 1702 . - . ID=gene-HMPREF7215_0831;Name=HMPREF7215_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0831 GCA_000177335.1|ADFP01000137.1 Genbank CDS 1589 1702 . - 0 ID=cds-EFB89339.1;Parent=gene-HMPREF7215_0831;Dbxref=NCBI_GP:EFB89339.1;Name=EFB89339.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0831;product=hypothetical protein;protein_id=EFB89339.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 1738 1875 . - . ID=gene-HMPREF7215_0832;Name=HMPREF7215_0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0832 GCA_000177335.1|ADFP01000137.1 Genbank CDS 1738 1875 . - 0 ID=cds-EFB89340.1;Parent=gene-HMPREF7215_0832;Dbxref=NCBI_GP:EFB89340.1;Name=EFB89340.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0832;product=hypothetical protein;protein_id=EFB89340.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 2060 2608 . - . ID=gene-HMPREF7215_0833;Name=HMPREF7215_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0833 GCA_000177335.1|ADFP01000137.1 Genbank CDS 2060 2608 . - 0 ID=cds-EFB89341.1;Parent=gene-HMPREF7215_0833;Dbxref=NCBI_GP:EFB89341.1;Name=EFB89341.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF7215_0833;product=transcriptional regulator%2C TetR family;protein_id=EFB89341.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 2663 2800 . + . ID=gene-HMPREF7215_0835;Name=HMPREF7215_0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0835 GCA_000177335.1|ADFP01000137.1 Genbank CDS 2663 2800 . + 0 ID=cds-EFB89342.1;Parent=gene-HMPREF7215_0835;Dbxref=NCBI_GP:EFB89342.1;Name=EFB89342.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0835;product=hypothetical protein;protein_id=EFB89342.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 2797 4179 . - . ID=gene-HMPREF7215_0834;Name=HMPREF7215_0834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0834 GCA_000177335.1|ADFP01000137.1 Genbank CDS 2797 4179 . - 0 ID=cds-EFB89343.1;Parent=gene-HMPREF7215_0834;Dbxref=NCBI_GP:EFB89343.1;Name=EFB89343.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF7215_0834;product=hypothetical protein;protein_id=EFB89343.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 4412 4786 . - . ID=gene-HMPREF7215_0836;Name=HMPREF7215_0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0836 GCA_000177335.1|ADFP01000137.1 Genbank CDS 4412 4786 . - 0 ID=cds-EFB89344.1;Parent=gene-HMPREF7215_0836;Dbxref=NCBI_GP:EFB89344.1;Name=EFB89344.1;Note=identified by match to protein family HMM PF01527;gbkey=CDS;locus_tag=HMPREF7215_0836;product=transposase;protein_id=EFB89344.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 5012 5236 . + . ID=gene-HMPREF7215_0837;Name=HMPREF7215_0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0837 GCA_000177335.1|ADFP01000137.1 Genbank CDS 5012 5236 . + 0 ID=cds-EFB89345.1;Parent=gene-HMPREF7215_0837;Dbxref=NCBI_GP:EFB89345.1;Name=EFB89345.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0837;product=toxin-antitoxin system%2C toxin component%2C RelE family;protein_id=EFB89345.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 5379 5678 . + . ID=gene-HMPREF7215_0838;Name=HMPREF7215_0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0838 GCA_000177335.1|ADFP01000137.1 Genbank CDS 5379 5678 . + 0 ID=cds-EFB89346.1;Parent=gene-HMPREF7215_0838;Dbxref=NCBI_GP:EFB89346.1;Name=EFB89346.1;gbkey=CDS;locus_tag=HMPREF7215_0838;product=toxin-antitoxin system%2C antitoxin component%2C Xre family;protein_id=EFB89346.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 5726 5839 . + . ID=gene-HMPREF7215_0839;Name=HMPREF7215_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0839 GCA_000177335.1|ADFP01000137.1 Genbank CDS 5726 5839 . + 0 ID=cds-EFB89347.1;Parent=gene-HMPREF7215_0839;Dbxref=NCBI_GP:EFB89347.1;Name=EFB89347.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0839;product=hypothetical protein;protein_id=EFB89347.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 5878 6153 . + . ID=gene-HMPREF7215_0840;Name=HMPREF7215_0840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0840 GCA_000177335.1|ADFP01000137.1 Genbank CDS 5878 6153 . + 0 ID=cds-EFB89348.1;Parent=gene-HMPREF7215_0840;Dbxref=NCBI_GP:EFB89348.1;Name=EFB89348.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=HMPREF7215_0840;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB89348.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 6155 6427 . + . ID=gene-HMPREF7215_0841;Name=HMPREF7215_0841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0841 GCA_000177335.1|ADFP01000137.1 Genbank CDS 6155 6427 . + 0 ID=cds-EFB89349.1;Parent=gene-HMPREF7215_0841;Dbxref=NCBI_GP:EFB89349.1;Name=EFB89349.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_0841;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB89349.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 6621 7772 . - . ID=gene-HMPREF7215_0842;Name=HMPREF7215_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0842 GCA_000177335.1|ADFP01000137.1 Genbank CDS 6621 7772 . - 0 ID=cds-EFB89350.1;Parent=gene-HMPREF7215_0842;Dbxref=NCBI_GP:EFB89350.1;Name=EFB89350.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF7215_0842;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFB89350.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 7778 9235 . - . ID=gene-HMPREF7215_0843;Name=HMPREF7215_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0843 GCA_000177335.1|ADFP01000137.1 Genbank CDS 7778 9235 . - 0 ID=cds-EFB89351.1;Parent=gene-HMPREF7215_0843;Dbxref=NCBI_GP:EFB89351.1;Name=EFB89351.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF7215_0843;product=outer membrane efflux protein;protein_id=EFB89351.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 9259 12303 . - . ID=gene-HMPREF7215_0844;Name=HMPREF7215_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0844 GCA_000177335.1|ADFP01000137.1 Genbank CDS 9259 12303 . - 0 ID=cds-EFB89352.1;Parent=gene-HMPREF7215_0844;Dbxref=NCBI_GP:EFB89352.1;Name=EFB89352.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;locus_tag=HMPREF7215_0844;product=RND transporter%2C HAE1 family;protein_id=EFB89352.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 12300 12920 . - . ID=gene-HMPREF7215_0845;Name=HMPREF7215_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0845 GCA_000177335.1|ADFP01000137.1 Genbank CDS 12300 12920 . - 0 ID=cds-EFB89353.1;Parent=gene-HMPREF7215_0845;Dbxref=NCBI_GP:EFB89353.1;Name=EFB89353.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF7215_0845;product=transcriptional regulator%2C TetR family;protein_id=EFB89353.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 13136 13235 . - . ID=gene-HMPREF7215_0846;Name=srpB;gbkey=Gene;gene=srpB;gene_biotype=SRP_RNA;locus_tag=HMPREF7215_0846 GCA_000177335.1|ADFP01000137.1 Genbank SRP_RNA 13136 13235 . - . ID=rna-HMPREF7215_0846;Parent=gene-HMPREF7215_0846;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF7215_0846;product=Bacterial signal recognition particle RNA GCA_000177335.1|ADFP01000137.1 Genbank exon 13136 13235 . - . ID=exon-HMPREF7215_0846-1;Parent=rna-HMPREF7215_0846;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF7215_0846;product=Bacterial signal recognition particle RNA GCA_000177335.1|ADFP01000137.1 Genbank gene 13370 13738 . - . ID=gene-HMPREF7215_0847;Name=HMPREF7215_0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0847 GCA_000177335.1|ADFP01000137.1 Genbank CDS 13370 13738 . - 0 ID=cds-EFB89354.1;Parent=gene-HMPREF7215_0847;Dbxref=NCBI_GP:EFB89354.1;Name=EFB89354.1;Note=identified by match to protein family HMM PF07411;gbkey=CDS;locus_tag=HMPREF7215_0847;product=hypothetical protein;protein_id=EFB89354.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 13781 14797 . - . ID=gene-HMPREF7215_0848;Name=HMPREF7215_0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0848 GCA_000177335.1|ADFP01000137.1 Genbank CDS 13781 14797 . - 0 ID=cds-EFB89355.1;Parent=gene-HMPREF7215_0848;Dbxref=NCBI_GP:EFB89355.1;Name=EFB89355.1;gbkey=CDS;locus_tag=HMPREF7215_0848;product=hypothetical protein;protein_id=EFB89355.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 14993 15802 . - . ID=gene-HMPREF7215_0849;Name=HMPREF7215_0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0849 GCA_000177335.1|ADFP01000137.1 Genbank CDS 14993 15802 . - 0 ID=cds-EFB89356.1;Parent=gene-HMPREF7215_0849;Dbxref=NCBI_GP:EFB89356.1;Name=EFB89356.1;Note=identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_0849;product=ankyrin repeat protein;protein_id=EFB89356.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 15964 16464 . + . ID=gene-HMPREF7215_0850;Name=HMPREF7215_0850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0850 GCA_000177335.1|ADFP01000137.1 Genbank CDS 15964 16464 . + 0 ID=cds-EFB89357.1;Parent=gene-HMPREF7215_0850;Dbxref=NCBI_GP:EFB89357.1;Name=EFB89357.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0850;product=hypothetical protein;protein_id=EFB89357.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 16461 16997 . + . ID=gene-HMPREF7215_0851;Name=HMPREF7215_0851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0851 GCA_000177335.1|ADFP01000137.1 Genbank CDS 16461 16997 . + 0 ID=cds-EFB89358.1;Parent=gene-HMPREF7215_0851;Dbxref=NCBI_GP:EFB89358.1;Name=EFB89358.1;gbkey=CDS;locus_tag=HMPREF7215_0851;product=hypothetical protein;protein_id=EFB89358.1;transl_table=11 GCA_000177335.1|ADFP01000137.1 Genbank gene 16994 18184 . + . ID=gene-HMPREF7215_0852;Name=sdhA;end_range=18184,.;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0852;partial=true GCA_000177335.1|ADFP01000137.1 Genbank CDS 16994 18184 . + 0 ID=cds-EFB89359.1;Parent=gene-HMPREF7215_0852;Dbxref=NCBI_GP:EFB89359.1;Name=EFB89359.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00890%3B match to protein family HMM PF07992;end_range=18184,.;gbkey=CDS;gene=sdhA;locus_tag=HMPREF7215_0852;partial=true;product=succinate dehydrogenase flavoprotein subunit;protein_id=EFB89359.1;transl_table=11 ##sequence-region ADFP01000136.1 1 3185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000136.1 Genbank region 1 3185 . + . ID=ADFP01000136.1:1..3185;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000136.1 Genbank gene 4 1026 . + . ID=gene-HMPREF7215_2213;Name=HMPREF7215_2213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2213 GCA_000177335.1|ADFP01000136.1 Genbank CDS 4 1026 . + 0 ID=cds-EFB89360.1;Parent=gene-HMPREF7215_2213;Dbxref=NCBI_GP:EFB89360.1;Name=EFB89360.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2213;product=hypothetical protein;protein_id=EFB89360.1;transl_table=11 GCA_000177335.1|ADFP01000136.1 Genbank gene 1197 1325 . + . ID=gene-HMPREF7215_2214;Name=HMPREF7215_2214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2214 GCA_000177335.1|ADFP01000136.1 Genbank CDS 1197 1325 . + 0 ID=cds-EFB89361.1;Parent=gene-HMPREF7215_2214;Dbxref=NCBI_GP:EFB89361.1;Name=EFB89361.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2214;product=hypothetical protein;protein_id=EFB89361.1;transl_table=11 GCA_000177335.1|ADFP01000136.1 Genbank gene 1333 2751 . + . ID=gene-HMPREF7215_2215;Name=HMPREF7215_2215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2215 GCA_000177335.1|ADFP01000136.1 Genbank CDS 1333 2751 . + 0 ID=cds-EFB89362.1;Parent=gene-HMPREF7215_2215;Dbxref=NCBI_GP:EFB89362.1;Name=EFB89362.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF7215_2215;product=hypothetical protein;protein_id=EFB89362.1;transl_table=11 GCA_000177335.1|ADFP01000136.1 Genbank gene 2748 2957 . + . ID=gene-HMPREF7215_2216;Name=HMPREF7215_2216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2216 GCA_000177335.1|ADFP01000136.1 Genbank CDS 2748 2957 . + 0 ID=cds-EFB89363.1;Parent=gene-HMPREF7215_2216;Dbxref=NCBI_GP:EFB89363.1;Name=EFB89363.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2216;product=hypothetical protein;protein_id=EFB89363.1;transl_table=11 ##sequence-region ADFP01000135.1 1 101906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000135.1 Genbank region 1 101906 . + . ID=ADFP01000135.1:1..101906;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000135.1 Genbank gene 1 811 . + . ID=gene-HMPREF7215_0125;Name=HMPREF7215_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0125;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000135.1 Genbank CDS 1 811 . + 1 ID=cds-EFB89364.1;Parent=gene-HMPREF7215_0125;Dbxref=NCBI_GP:EFB89364.1;Name=EFB89364.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;locus_tag=HMPREF7215_0125;partial=true;product=RNA methyltransferase%2C TrmH family%2C group 3;protein_id=EFB89364.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 834 1649 . + . ID=gene-HMPREF7215_0126;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0126 GCA_000177335.1|ADFP01000135.1 Genbank CDS 834 1649 . + 0 ID=cds-EFB89365.1;Parent=gene-HMPREF7215_0126;Dbxref=NCBI_GP:EFB89365.1;Name=EFB89365.1;Note=identified by match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;locus_tag=HMPREF7215_0126;product=pyrroline-5-carboxylate reductase;protein_id=EFB89365.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 1760 2851 . - . ID=gene-HMPREF7215_0127;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0127 GCA_000177335.1|ADFP01000135.1 Genbank CDS 1760 2851 . - 0 ID=cds-EFB89366.1;Parent=gene-HMPREF7215_0127;Dbxref=NCBI_GP:EFB89366.1;Name=EFB89366.1;Note=identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401;gbkey=CDS;gene=msrB;locus_tag=HMPREF7215_0127;product=methionine-R-sulfoxide reductase;protein_id=EFB89366.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 3028 3102 . + . ID=gene-HMPREF7215_0128;Name=HMPREF7215_0128;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0128 GCA_000177335.1|ADFP01000135.1 Genbank tRNA 3028 3102 . + . ID=rna-HMPREF7215_0128;Parent=gene-HMPREF7215_0128;gbkey=tRNA;locus_tag=HMPREF7215_0128;product=tRNA-Val GCA_000177335.1|ADFP01000135.1 Genbank exon 3028 3102 . + . ID=exon-HMPREF7215_0128-1;Parent=rna-HMPREF7215_0128;gbkey=tRNA;locus_tag=HMPREF7215_0128;product=tRNA-Val GCA_000177335.1|ADFP01000135.1 Genbank gene 3129 3203 . + . ID=gene-HMPREF7215_0129;Name=HMPREF7215_0129;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0129 GCA_000177335.1|ADFP01000135.1 Genbank tRNA 3129 3203 . + . ID=rna-HMPREF7215_0129;Parent=gene-HMPREF7215_0129;gbkey=tRNA;locus_tag=HMPREF7215_0129;product=tRNA-Val GCA_000177335.1|ADFP01000135.1 Genbank exon 3129 3203 . + . ID=exon-HMPREF7215_0129-1;Parent=rna-HMPREF7215_0129;gbkey=tRNA;locus_tag=HMPREF7215_0129;product=tRNA-Val GCA_000177335.1|ADFP01000135.1 Genbank gene 3363 3737 . + . ID=gene-HMPREF7215_0130;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0130 GCA_000177335.1|ADFP01000135.1 Genbank CDS 3363 3737 . + 0 ID=cds-EFB89367.1;Parent=gene-HMPREF7215_0130;Dbxref=NCBI_GP:EFB89367.1;Name=EFB89367.1;Note=identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556;gbkey=CDS;gene=acpS;locus_tag=HMPREF7215_0130;product=holo-[acyl-carrier-protein] synthase;protein_id=EFB89367.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 3737 5230 . + . ID=gene-HMPREF7215_0131;Name=HMPREF7215_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0131 GCA_000177335.1|ADFP01000135.1 Genbank CDS 3737 5230 . + 0 ID=cds-EFB89368.1;Parent=gene-HMPREF7215_0131;Dbxref=NCBI_GP:EFB89368.1;Name=EFB89368.1;Note=identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197;gbkey=CDS;locus_tag=HMPREF7215_0131;product=YjeF domain protein;protein_id=EFB89368.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 5224 5718 . + . ID=gene-HMPREF7215_0132;Name=HMPREF7215_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0132 GCA_000177335.1|ADFP01000135.1 Genbank CDS 5224 5718 . + 0 ID=cds-EFB89369.1;Parent=gene-HMPREF7215_0132;Dbxref=NCBI_GP:EFB89369.1;Name=EFB89369.1;Note=identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;locus_tag=HMPREF7215_0132;product=hydrolase%2C P-loop family;protein_id=EFB89369.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 5715 6371 . + . ID=gene-HMPREF7215_0133;Name=yeaZ;gbkey=Gene;gene=yeaZ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0133 GCA_000177335.1|ADFP01000135.1 Genbank CDS 5715 6371 . + 0 ID=cds-EFB89370.1;Parent=gene-HMPREF7215_0133;Dbxref=NCBI_GP:EFB89370.1;Name=EFB89370.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725;gbkey=CDS;gene=yeaZ;locus_tag=HMPREF7215_0133;product=universal bacterial protein YeaZ;protein_id=EFB89370.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 6427 6636 . + . ID=gene-HMPREF7215_0134;Name=HMPREF7215_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0134 GCA_000177335.1|ADFP01000135.1 Genbank CDS 6427 6636 . + 0 ID=cds-EFB89371.1;Parent=gene-HMPREF7215_0134;Dbxref=NCBI_GP:EFB89371.1;Name=EFB89371.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_0134;product=4Fe-4S binding domain protein;protein_id=EFB89371.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 6636 7772 . + . ID=gene-HMPREF7215_0135;Name=HMPREF7215_0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0135 GCA_000177335.1|ADFP01000135.1 Genbank CDS 6636 7772 . + 0 ID=cds-EFB89372.1;Parent=gene-HMPREF7215_0135;Dbxref=NCBI_GP:EFB89372.1;Name=EFB89372.1;Note=identified by match to protein family HMM PF01855;gbkey=CDS;locus_tag=HMPREF7215_0135;product=2-oxoglutarate ferredoxin oxidoreductase subunit alpha;protein_id=EFB89372.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 7774 8592 . + . ID=gene-HMPREF7215_0136;Name=orB;gbkey=Gene;gene=orB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0136 GCA_000177335.1|ADFP01000135.1 Genbank CDS 7774 8592 . + 0 ID=cds-EFB89373.1;Parent=gene-HMPREF7215_0136;Dbxref=NCBI_GP:EFB89373.1;Name=EFB89373.1;Note=identified by match to protein family HMM PF02775;gbkey=CDS;gene=orB;locus_tag=HMPREF7215_0136;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=EFB89373.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 8604 9173 . + . ID=gene-HMPREF7215_0137;Name=HMPREF7215_0137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0137 GCA_000177335.1|ADFP01000135.1 Genbank CDS 8604 9173 . + 0 ID=cds-EFB89374.1;Parent=gene-HMPREF7215_0137;Dbxref=NCBI_GP:EFB89374.1;Name=EFB89374.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF7215_0137;product=2-oxoacid:ferredoxin/flavodoxin oxidoreductase%2C gamma subunit;protein_id=EFB89374.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 9227 9340 . + . ID=gene-HMPREF7215_0138;Name=HMPREF7215_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0138 GCA_000177335.1|ADFP01000135.1 Genbank CDS 9227 9340 . + 0 ID=cds-EFB89375.1;Parent=gene-HMPREF7215_0138;Dbxref=NCBI_GP:EFB89375.1;Name=EFB89375.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0138;product=hypothetical protein;protein_id=EFB89375.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 9313 10938 . + . ID=gene-HMPREF7215_0139;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0139 GCA_000177335.1|ADFP01000135.1 Genbank CDS 9313 10938 . + 0 ID=cds-EFB89376.1;Parent=gene-HMPREF7215_0139;Dbxref=NCBI_GP:EFB89376.1;Name=EFB89376.1;Note=identified by match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA;locus_tag=HMPREF7215_0139;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=EFB89376.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 11232 12248 . + . ID=gene-HMPREF7215_0140;Name=HMPREF7215_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0140 GCA_000177335.1|ADFP01000135.1 Genbank CDS 11232 12248 . + 0 ID=cds-EFB89377.1;Parent=gene-HMPREF7215_0140;Dbxref=NCBI_GP:EFB89377.1;Name=EFB89377.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0140;product=hypothetical protein;protein_id=EFB89377.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 12478 13494 . + . ID=gene-HMPREF7215_0141;Name=HMPREF7215_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0141 GCA_000177335.1|ADFP01000135.1 Genbank CDS 12478 13494 . + 0 ID=cds-EFB89378.1;Parent=gene-HMPREF7215_0141;Dbxref=NCBI_GP:EFB89378.1;Name=EFB89378.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF7215_0141;product=site-specific recombinase%2C phage integrase family;protein_id=EFB89378.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 13646 13960 . + . ID=gene-HMPREF7215_0142;Name=HMPREF7215_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0142 GCA_000177335.1|ADFP01000135.1 Genbank CDS 13646 13960 . + 0 ID=cds-EFB89379.1;Parent=gene-HMPREF7215_0142;Dbxref=NCBI_GP:EFB89379.1;Name=EFB89379.1;Note=identified by match to protein family HMM PF04993;gbkey=CDS;locus_tag=HMPREF7215_0142;product=TfoX N-terminal domain protein;protein_id=EFB89379.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 14103 14216 . - . ID=gene-HMPREF7215_0143;Name=HMPREF7215_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0143 GCA_000177335.1|ADFP01000135.1 Genbank CDS 14103 14216 . - 0 ID=cds-EFB89380.1;Parent=gene-HMPREF7215_0143;Dbxref=NCBI_GP:EFB89380.1;Name=EFB89380.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0143;product=hypothetical protein;protein_id=EFB89380.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 14901 15017 . + . ID=gene-HMPREF7215_0144;Name=HMPREF7215_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0144 GCA_000177335.1|ADFP01000135.1 Genbank CDS 14901 15017 . + 0 ID=cds-EFB89381.1;Parent=gene-HMPREF7215_0144;Dbxref=NCBI_GP:EFB89381.1;Name=EFB89381.1;gbkey=CDS;locus_tag=HMPREF7215_0144;product=hypothetical protein;protein_id=EFB89381.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 15331 15453 . + . ID=gene-HMPREF7215_0145;Name=HMPREF7215_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0145 GCA_000177335.1|ADFP01000135.1 Genbank CDS 15331 15453 . + 0 ID=cds-EFB89382.1;Parent=gene-HMPREF7215_0145;Dbxref=NCBI_GP:EFB89382.1;Name=EFB89382.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0145;product=hypothetical protein;protein_id=EFB89382.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 15546 15794 . + . ID=gene-HMPREF7215_0146;Name=HMPREF7215_0146;Note=uvrA;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0146 GCA_000177335.1|ADFP01000135.1 Genbank CDS 15546 15794 . + 0 ID=cds-EFB89383.1;Parent=gene-HMPREF7215_0146;Dbxref=NCBI_GP:EFB89383.1;Name=EFB89383.1;gbkey=CDS;locus_tag=HMPREF7215_0146;product=hypothetical protein;protein_id=EFB89383.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 15887 16315 . + . ID=gene-HMPREF7215_0147;Name=HMPREF7215_0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0147 GCA_000177335.1|ADFP01000135.1 Genbank CDS 15887 16315 . + 0 ID=cds-EFB89384.1;Parent=gene-HMPREF7215_0147;Dbxref=NCBI_GP:EFB89384.1;Name=EFB89384.1;gbkey=CDS;locus_tag=HMPREF7215_0147;product=hypothetical protein;protein_id=EFB89384.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 16352 16621 . + . ID=gene-HMPREF7215_0149;Name=HMPREF7215_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0149 GCA_000177335.1|ADFP01000135.1 Genbank CDS 16352 16621 . + 0 ID=cds-EFB89385.1;Parent=gene-HMPREF7215_0149;Dbxref=NCBI_GP:EFB89385.1;Name=EFB89385.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0149;product=hypothetical protein;protein_id=EFB89385.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 16611 16745 . - . ID=gene-HMPREF7215_0148;Name=HMPREF7215_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0148 GCA_000177335.1|ADFP01000135.1 Genbank CDS 16611 16745 . - 0 ID=cds-EFB89386.1;Parent=gene-HMPREF7215_0148;Dbxref=NCBI_GP:EFB89386.1;Name=EFB89386.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0148;product=hypothetical protein;protein_id=EFB89386.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 16866 17117 . - . ID=gene-HMPREF7215_0150;Name=HMPREF7215_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0150 GCA_000177335.1|ADFP01000135.1 Genbank CDS 16866 17117 . - 0 ID=cds-EFB89387.1;Parent=gene-HMPREF7215_0150;Dbxref=NCBI_GP:EFB89387.1;Name=EFB89387.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0150;product=hypothetical protein;protein_id=EFB89387.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 17190 18632 . - . ID=gene-HMPREF7215_0151;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0151 GCA_000177335.1|ADFP01000135.1 Genbank CDS 17190 18632 . - 0 ID=cds-EFB89388.1;Parent=gene-HMPREF7215_0151;Dbxref=NCBI_GP:EFB89388.1;Name=EFB89388.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01316;gbkey=CDS;gene=gltA;locus_tag=HMPREF7215_0151;product=glutamate synthase (NADPH)%2C homotetrameric;protein_id=EFB89388.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 18634 19467 . - . ID=gene-HMPREF7215_0152;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0152 GCA_000177335.1|ADFP01000135.1 Genbank CDS 18634 19467 . - 0 ID=cds-EFB89389.1;Parent=gene-HMPREF7215_0152;Dbxref=NCBI_GP:EFB89389.1;Name=EFB89389.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00175;gbkey=CDS;gene=gltD;locus_tag=HMPREF7215_0152;product=oxidoreductase NAD-binding domain protein;protein_id=EFB89389.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 19779 21116 . + . ID=gene-HMPREF7215_0153;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=HMPREF7215_0153 GCA_000177335.1|ADFP01000135.1 Genbank CDS 19779 21116 . + 0 ID=cds-EFB89390.1;Parent=gene-HMPREF7215_0153;Dbxref=NCBI_GP:EFB89390.1;Name=EFB89390.1;Note=identified by match to protein family HMM PF00342;gbkey=CDS;gene=pgi;locus_tag=HMPREF7215_0153;product=glucose-6-phosphate isomerase;protein_id=EFB89390.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 21188 22015 . - . ID=gene-HMPREF7215_0154;Name=HMPREF7215_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0154 GCA_000177335.1|ADFP01000135.1 Genbank CDS 21188 22015 . - 0 ID=cds-EFB89391.1;Parent=gene-HMPREF7215_0154;Dbxref=NCBI_GP:EFB89391.1;Name=EFB89391.1;Note=identified by match to protein family HMM PF01171;gbkey=CDS;locus_tag=HMPREF7215_0154;product=PP-loop family protein;protein_id=EFB89391.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 22180 22746 . + . ID=gene-HMPREF7215_0155;Name=HMPREF7215_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0155 GCA_000177335.1|ADFP01000135.1 Genbank CDS 22180 22746 . + 0 ID=cds-EFB89392.1;Parent=gene-HMPREF7215_0155;Dbxref=NCBI_GP:EFB89392.1;Name=EFB89392.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0155;product=hypothetical protein;protein_id=EFB89392.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 22743 23810 . + . ID=gene-HMPREF7215_0156;Name=HMPREF7215_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0156 GCA_000177335.1|ADFP01000135.1 Genbank CDS 22743 23810 . + 0 ID=cds-EFB89393.1;Parent=gene-HMPREF7215_0156;Dbxref=NCBI_GP:EFB89393.1;Name=EFB89393.1;Note=identified by match to protein family HMM TIGR00374;gbkey=CDS;locus_tag=HMPREF7215_0156;product=hypothetical protein;protein_id=EFB89393.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 23800 24384 . + . ID=gene-HMPREF7215_0157;Name=HMPREF7215_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0157 GCA_000177335.1|ADFP01000135.1 Genbank CDS 23800 24384 . + 0 ID=cds-EFB89394.1;Parent=gene-HMPREF7215_0157;Dbxref=NCBI_GP:EFB89394.1;Name=EFB89394.1;gbkey=CDS;locus_tag=HMPREF7215_0157;product=hypothetical protein;protein_id=EFB89394.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 24457 25470 . - . ID=gene-HMPREF7215_0158;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0158 GCA_000177335.1|ADFP01000135.1 Genbank CDS 24457 25470 . - 0 ID=cds-EFB89395.1;Parent=gene-HMPREF7215_0158;Dbxref=NCBI_GP:EFB89395.1;Name=EFB89395.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS;locus_tag=HMPREF7215_0158;product=tryptophan--tRNA ligase;protein_id=EFB89395.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 25726 26460 . + . ID=gene-HMPREF7215_0160;Name=HMPREF7215_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0160 GCA_000177335.1|ADFP01000135.1 Genbank CDS 25726 26460 . + 0 ID=cds-EFB89396.1;Parent=gene-HMPREF7215_0160;Dbxref=NCBI_GP:EFB89396.1;Name=EFB89396.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF7215_0160;product=transcriptional regulator%2C IclR family%2C C-terminal domain protein;protein_id=EFB89396.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 26441 26557 . - . ID=gene-HMPREF7215_0159;Name=HMPREF7215_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0159 GCA_000177335.1|ADFP01000135.1 Genbank CDS 26441 26557 . - 0 ID=cds-EFB89397.1;Parent=gene-HMPREF7215_0159;Dbxref=NCBI_GP:EFB89397.1;Name=EFB89397.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0159;product=hypothetical protein;protein_id=EFB89397.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 26602 26919 . - . ID=gene-HMPREF7215_0161;Name=HMPREF7215_0161;gbkey=Gene;gene_biotype=tmRNA;locus_tag=HMPREF7215_0161 GCA_000177335.1|ADFP01000135.1 Genbank tmRNA 26602 26919 . - . ID=rna-HMPREF7215_0161;Parent=gene-HMPREF7215_0161;gbkey=tmRNA;locus_tag=HMPREF7215_0161 GCA_000177335.1|ADFP01000135.1 Genbank exon 26602 26919 . - . ID=exon-HMPREF7215_0161-1;Parent=rna-HMPREF7215_0161;gbkey=tmRNA;locus_tag=HMPREF7215_0161 GCA_000177335.1|ADFP01000135.1 Genbank gene 26954 27427 . - . ID=gene-HMPREF7215_0163;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0163 GCA_000177335.1|ADFP01000135.1 Genbank CDS 26954 27427 . - 0 ID=cds-EFB89398.1;Parent=gene-HMPREF7215_0163;Dbxref=NCBI_GP:EFB89398.1;Name=EFB89398.1;Note=identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086;gbkey=CDS;gene=smpB;locus_tag=HMPREF7215_0163;product=SsrA-binding protein;protein_id=EFB89398.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 27545 27622 . - . ID=gene-HMPREF7215_0164;Name=HMPREF7215_0164;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0164 GCA_000177335.1|ADFP01000135.1 Genbank tRNA 27545 27622 . - . ID=rna-HMPREF7215_0164;Parent=gene-HMPREF7215_0164;gbkey=tRNA;locus_tag=HMPREF7215_0164;product=tRNA-Pro GCA_000177335.1|ADFP01000135.1 Genbank exon 27545 27622 . - . ID=exon-HMPREF7215_0164-1;Parent=rna-HMPREF7215_0164;gbkey=tRNA;locus_tag=HMPREF7215_0164;product=tRNA-Pro GCA_000177335.1|ADFP01000135.1 Genbank gene 27691 28281 . - . ID=gene-HMPREF7215_0165;Name=HMPREF7215_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0165 GCA_000177335.1|ADFP01000135.1 Genbank CDS 27691 28281 . - 0 ID=cds-EFB89399.1;Parent=gene-HMPREF7215_0165;Dbxref=NCBI_GP:EFB89399.1;Name=EFB89399.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0165;product=hypothetical protein;protein_id=EFB89399.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 28418 28969 . + . ID=gene-HMPREF7215_0166;Name=HMPREF7215_0166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0166 GCA_000177335.1|ADFP01000135.1 Genbank CDS 28418 28969 . + 0 ID=cds-EFB89400.1;Parent=gene-HMPREF7215_0166;Dbxref=NCBI_GP:EFB89400.1;Name=EFB89400.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=HMPREF7215_0166;product=isochorismatase family protein;protein_id=EFB89400.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 28975 29634 . + . ID=gene-HMPREF7215_0167;Name=HMPREF7215_0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0167 GCA_000177335.1|ADFP01000135.1 Genbank CDS 28975 29634 . + 0 ID=cds-EFB89401.1;Parent=gene-HMPREF7215_0167;Dbxref=NCBI_GP:EFB89401.1;Name=EFB89401.1;Note=identified by match to protein family HMM PF01478;gbkey=CDS;locus_tag=HMPREF7215_0167;product=peptidase%2C A24 family;protein_id=EFB89401.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 29762 30178 . + . ID=gene-HMPREF7215_0168;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=HMPREF7215_0168 GCA_000177335.1|ADFP01000135.1 Genbank CDS 29762 30178 . + 0 ID=cds-EFB89402.1;Parent=gene-HMPREF7215_0168;Dbxref=NCBI_GP:EFB89402.1;Name=EFB89402.1;Note=identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR03081;gbkey=CDS;gene=mce;locus_tag=HMPREF7215_0168;product=methylmalonyl-CoA epimerase;protein_id=EFB89402.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 30276 30992 . + . ID=gene-HMPREF7215_0169;Name=HMPREF7215_0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0169 GCA_000177335.1|ADFP01000135.1 Genbank CDS 30276 30992 . + 0 ID=cds-EFB89403.1;Parent=gene-HMPREF7215_0169;Dbxref=NCBI_GP:EFB89403.1;Name=EFB89403.1;Note=identified by match to protein family HMM PF03483;gbkey=CDS;locus_tag=HMPREF7215_0169;product=B3/4 domain protein;protein_id=EFB89403.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 31176 32534 . - . ID=gene-HMPREF7215_0170;Name=HMPREF7215_0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0170 GCA_000177335.1|ADFP01000135.1 Genbank CDS 31176 32534 . - 0 ID=cds-EFB89404.1;Parent=gene-HMPREF7215_0170;Dbxref=NCBI_GP:EFB89404.1;Name=EFB89404.1;Note=identified by match to protein family HMM PF08238;gbkey=CDS;locus_tag=HMPREF7215_0170;product=Sel1 repeat protein;protein_id=EFB89404.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 32544 32675 . + . ID=gene-HMPREF7215_0171;Name=HMPREF7215_0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0171 GCA_000177335.1|ADFP01000135.1 Genbank CDS 32544 32675 . + 0 ID=cds-EFB89405.1;Parent=gene-HMPREF7215_0171;Dbxref=NCBI_GP:EFB89405.1;Name=EFB89405.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0171;product=hypothetical protein;protein_id=EFB89405.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 32689 32886 . + . ID=gene-HMPREF7215_0172;Name=HMPREF7215_0172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0172 GCA_000177335.1|ADFP01000135.1 Genbank CDS 32689 32886 . + 0 ID=cds-EFB89406.1;Parent=gene-HMPREF7215_0172;Dbxref=NCBI_GP:EFB89406.1;Name=EFB89406.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0172;product=hypothetical protein;protein_id=EFB89406.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 33045 34403 . + . ID=gene-HMPREF7215_0173;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0173 GCA_000177335.1|ADFP01000135.1 Genbank CDS 33045 34403 . + 0 ID=cds-EFB89407.1;Parent=gene-HMPREF7215_0173;Dbxref=NCBI_GP:EFB89407.1;Name=EFB89407.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF7215_0173;product=amino acid carrier protein;protein_id=EFB89407.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 34616 35167 . + . ID=gene-HMPREF7215_0174;Name=HMPREF7215_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0174 GCA_000177335.1|ADFP01000135.1 Genbank CDS 34616 35167 . + 0 ID=cds-EFB89408.1;Parent=gene-HMPREF7215_0174;Dbxref=NCBI_GP:EFB89408.1;Name=EFB89408.1;Note=identified by match to protein family HMM PF04011;gbkey=CDS;locus_tag=HMPREF7215_0174;product=LemA family protein;protein_id=EFB89408.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 35585 39775 . + . ID=gene-HMPREF7215_0175;Name=HMPREF7215_0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0175 GCA_000177335.1|ADFP01000135.1 Genbank CDS 35585 39775 . + 0 ID=cds-EFB89409.1;Parent=gene-HMPREF7215_0175;Dbxref=NCBI_GP:EFB89409.1;Name=EFB89409.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF7215_0175;product=Hep/Hag repeat protein;protein_id=EFB89409.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 39891 40394 . + . ID=gene-HMPREF7215_0176;Name=HMPREF7215_0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0176 GCA_000177335.1|ADFP01000135.1 Genbank CDS 39891 40394 . + 0 ID=cds-EFB89410.1;Parent=gene-HMPREF7215_0176;Dbxref=NCBI_GP:EFB89410.1;Name=EFB89410.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF7215_0176;product=outer membrane protein;protein_id=EFB89410.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 40482 40751 . + . ID=gene-HMPREF7215_0177;Name=HMPREF7215_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0177 GCA_000177335.1|ADFP01000135.1 Genbank CDS 40482 40751 . + 0 ID=cds-EFB89411.1;Parent=gene-HMPREF7215_0177;Dbxref=NCBI_GP:EFB89411.1;Name=EFB89411.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0177;product=hypothetical protein;protein_id=EFB89411.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 40754 42154 . - . ID=gene-HMPREF7215_0178;Name=HMPREF7215_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0178 GCA_000177335.1|ADFP01000135.1 Genbank CDS 40754 42154 . - 0 ID=cds-EFB89412.1;Parent=gene-HMPREF7215_0178;Dbxref=NCBI_GP:EFB89412.1;Name=EFB89412.1;Note=identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037;gbkey=CDS;locus_tag=HMPREF7215_0178;product=peptidase Do;protein_id=EFB89412.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 42646 42722 . + . ID=gene-HMPREF7215_0179;Name=HMPREF7215_0179;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0179 GCA_000177335.1|ADFP01000135.1 Genbank tRNA 42646 42722 . + . ID=rna-HMPREF7215_0179;Parent=gene-HMPREF7215_0179;gbkey=tRNA;locus_tag=HMPREF7215_0179;product=tRNA-Ile GCA_000177335.1|ADFP01000135.1 Genbank exon 42646 42722 . + . ID=exon-HMPREF7215_0179-1;Parent=rna-HMPREF7215_0179;gbkey=tRNA;locus_tag=HMPREF7215_0179;product=tRNA-Ile GCA_000177335.1|ADFP01000135.1 Genbank gene 42867 43076 . - . ID=gene-HMPREF7215_0180;Name=HMPREF7215_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0180 GCA_000177335.1|ADFP01000135.1 Genbank CDS 42867 43076 . - 0 ID=cds-EFB89413.1;Parent=gene-HMPREF7215_0180;Dbxref=NCBI_GP:EFB89413.1;Name=EFB89413.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0180;product=hypothetical protein;protein_id=EFB89413.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 43056 43883 . + . ID=gene-HMPREF7215_0181;Name=HMPREF7215_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0181 GCA_000177335.1|ADFP01000135.1 Genbank CDS 43056 43883 . + 0 ID=cds-EFB89414.1;Parent=gene-HMPREF7215_0181;Dbxref=NCBI_GP:EFB89414.1;Name=EFB89414.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;locus_tag=HMPREF7215_0181;product=PHP domain protein;protein_id=EFB89414.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 43895 45244 . + . ID=gene-HMPREF7215_0182;Name=HMPREF7215_0182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0182 GCA_000177335.1|ADFP01000135.1 Genbank CDS 43895 45244 . + 0 ID=cds-EFB89415.1;Parent=gene-HMPREF7215_0182;Dbxref=NCBI_GP:EFB89415.1;Name=EFB89415.1;Note=identified by match to protein family HMM PF01523;gbkey=CDS;locus_tag=HMPREF7215_0182;product=TldD/PmbA family protein;protein_id=EFB89415.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 45249 46868 . + . ID=gene-HMPREF7215_0183;Name=HMPREF7215_0183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0183 GCA_000177335.1|ADFP01000135.1 Genbank CDS 45249 46868 . + 0 ID=cds-EFB89416.1;Parent=gene-HMPREF7215_0183;Dbxref=NCBI_GP:EFB89416.1;Name=EFB89416.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;locus_tag=HMPREF7215_0183;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EFB89416.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 46917 47576 . + . ID=gene-HMPREF7215_0184;Name=HMPREF7215_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0184 GCA_000177335.1|ADFP01000135.1 Genbank CDS 46917 47576 . + 0 ID=cds-EFB89417.1;Parent=gene-HMPREF7215_0184;Dbxref=NCBI_GP:EFB89417.1;Name=EFB89417.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0184;product=hypothetical protein;protein_id=EFB89417.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 47666 48421 . + . ID=gene-HMPREF7215_0185;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=HMPREF7215_0185 GCA_000177335.1|ADFP01000135.1 Genbank CDS 47666 48421 . + 0 ID=cds-EFB89418.1;Parent=gene-HMPREF7215_0185;Dbxref=NCBI_GP:EFB89418.1;Name=EFB89418.1;Note=identified by match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM TIGR01966;gbkey=CDS;gene=rph;locus_tag=HMPREF7215_0185;product=tRNA nucleotidyltransferase;protein_id=EFB89418.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 48418 49029 . + . ID=gene-HMPREF7215_0186;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0186 GCA_000177335.1|ADFP01000135.1 Genbank CDS 48418 49029 . + 0 ID=cds-EFB89419.1;Parent=gene-HMPREF7215_0186;Dbxref=NCBI_GP:EFB89419.1;Name=EFB89419.1;Note=identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;gene=rdgB;locus_tag=HMPREF7215_0186;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;protein_id=EFB89419.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 49173 49394 . + . ID=gene-HMPREF7215_0187;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0187 GCA_000177335.1|ADFP01000135.1 Genbank CDS 49173 49394 . + 0 ID=cds-EFB89420.1;Parent=gene-HMPREF7215_0187;Dbxref=NCBI_GP:EFB89420.1;Name=EFB89420.1;Note=identified by match to protein family HMM TIGR00810;gbkey=CDS;gene=secG;locus_tag=HMPREF7215_0187;product=preprotein translocase%2C SecG subunit;protein_id=EFB89420.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 49417 50454 . + . ID=gene-HMPREF7215_0188;Name=HMPREF7215_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0188 GCA_000177335.1|ADFP01000135.1 Genbank CDS 49417 50454 . + 0 ID=cds-EFB89421.1;Parent=gene-HMPREF7215_0188;Dbxref=NCBI_GP:EFB89421.1;Name=EFB89421.1;Note=identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749;gbkey=CDS;locus_tag=HMPREF7215_0188;product=putative quinolinate phosphoribosyl transferase%2C C-terminal domain protein;protein_id=EFB89421.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 50643 51077 . + . ID=gene-HMPREF7215_0189;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=HMPREF7215_0189 GCA_000177335.1|ADFP01000135.1 Genbank CDS 50643 51077 . + 0 ID=cds-EFB89422.1;Parent=gene-HMPREF7215_0189;Dbxref=NCBI_GP:EFB89422.1;Name=EFB89422.1;Note=identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066;gbkey=CDS;gene=rplM;locus_tag=HMPREF7215_0189;product=ribosomal protein L13;protein_id=EFB89422.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 51094 51486 . + . ID=gene-HMPREF7215_0190;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=HMPREF7215_0190 GCA_000177335.1|ADFP01000135.1 Genbank CDS 51094 51486 . + 0 ID=cds-EFB89423.1;Parent=gene-HMPREF7215_0190;Dbxref=NCBI_GP:EFB89423.1;Name=EFB89423.1;Note=identified by match to protein family HMM PF00380;gbkey=CDS;gene=rpsI;locus_tag=HMPREF7215_0190;product=ribosomal protein S9;protein_id=EFB89423.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 51598 51675 . + . ID=gene-HMPREF7215_0191;Name=HMPREF7215_0191;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0191 GCA_000177335.1|ADFP01000135.1 Genbank tRNA 51598 51675 . + . ID=rna-HMPREF7215_0191;Parent=gene-HMPREF7215_0191;gbkey=tRNA;locus_tag=HMPREF7215_0191;product=tRNA-Asn GCA_000177335.1|ADFP01000135.1 Genbank exon 51598 51675 . + . ID=exon-HMPREF7215_0191-1;Parent=rna-HMPREF7215_0191;gbkey=tRNA;locus_tag=HMPREF7215_0191;product=tRNA-Asn GCA_000177335.1|ADFP01000135.1 Genbank gene 51748 51996 . - . ID=gene-HMPREF7215_0192;Name=HMPREF7215_0192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0192 GCA_000177335.1|ADFP01000135.1 Genbank CDS 51748 51996 . - 0 ID=cds-EFB89424.1;Parent=gene-HMPREF7215_0192;Dbxref=NCBI_GP:EFB89424.1;Name=EFB89424.1;gbkey=CDS;locus_tag=HMPREF7215_0192;product=hypothetical protein;protein_id=EFB89424.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 52048 53145 . - . ID=gene-HMPREF7215_0193;Name=HMPREF7215_0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0193 GCA_000177335.1|ADFP01000135.1 Genbank CDS 52048 53145 . - 0 ID=cds-EFB89425.1;Parent=gene-HMPREF7215_0193;Dbxref=NCBI_GP:EFB89425.1;Name=EFB89425.1;Note=identified by match to protein family HMM PF00730;gbkey=CDS;locus_tag=HMPREF7215_0193;product=putative A/G-specific adenine glycosylase;protein_id=EFB89425.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 53384 53746 . + . ID=gene-HMPREF7215_0194;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0194 GCA_000177335.1|ADFP01000135.1 Genbank CDS 53384 53746 . + 0 ID=cds-EFB89426.1;Parent=gene-HMPREF7215_0194;Dbxref=NCBI_GP:EFB89426.1;Name=EFB89426.1;Note=identified by match to protein family HMM PF01155%3B match to protein family HMM TIGR00100;gbkey=CDS;gene=hypA;locus_tag=HMPREF7215_0194;product=hydrogenase nickel insertion protein HypA;protein_id=EFB89426.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 53703 54398 . + . ID=gene-HMPREF7215_0195;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0195 GCA_000177335.1|ADFP01000135.1 Genbank CDS 53703 54398 . + 0 ID=cds-EFB89427.1;Parent=gene-HMPREF7215_0195;Dbxref=NCBI_GP:EFB89427.1;Name=EFB89427.1;Note=identified by match to protein family HMM PF02492%3B match to protein family HMM TIGR00073;gbkey=CDS;gene=hypB;locus_tag=HMPREF7215_0195;product=hydrogenase accessory protein HypB;protein_id=EFB89427.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 54430 56406 . + . ID=gene-HMPREF7215_0196;Name=HMPREF7215_0196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0196 GCA_000177335.1|ADFP01000135.1 Genbank CDS 54430 56406 . + 0 ID=cds-EFB89428.1;Parent=gene-HMPREF7215_0196;Dbxref=NCBI_GP:EFB89428.1;Name=EFB89428.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;locus_tag=HMPREF7215_0196;product=UvrD/REP helicase;protein_id=EFB89428.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 56360 56971 . + . ID=gene-HMPREF7215_0197;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0197 GCA_000177335.1|ADFP01000135.1 Genbank CDS 56360 56971 . + 0 ID=cds-EFB89429.1;Parent=gene-HMPREF7215_0197;Dbxref=NCBI_GP:EFB89429.1;Name=EFB89429.1;Note=identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;locus_tag=HMPREF7215_0197;product=dephospho-CoA kinase;protein_id=EFB89429.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 56989 57624 . + . ID=gene-HMPREF7215_0198;Name=HMPREF7215_0198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0198 GCA_000177335.1|ADFP01000135.1 Genbank CDS 56989 57624 . + 0 ID=cds-EFB89430.1;Parent=gene-HMPREF7215_0198;Dbxref=NCBI_GP:EFB89430.1;Name=EFB89430.1;Note=identified by match to protein family HMM PF02163;gbkey=CDS;locus_tag=HMPREF7215_0198;product=peptidase%2C M50 family;protein_id=EFB89430.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 57663 58724 . + . ID=gene-HMPREF7215_0199;Name=HMPREF7215_0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0199 GCA_000177335.1|ADFP01000135.1 Genbank CDS 57663 58724 . + 0 ID=cds-EFB89431.1;Parent=gene-HMPREF7215_0199;Dbxref=NCBI_GP:EFB89431.1;Name=EFB89431.1;Note=identified by match to protein family HMM TIGR03082;gbkey=CDS;locus_tag=HMPREF7215_0199;product=putative membrane protein AbrB;protein_id=EFB89431.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 58848 59273 . - . ID=gene-HMPREF7215_0200;Name=HMPREF7215_0200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0200 GCA_000177335.1|ADFP01000135.1 Genbank CDS 58848 59273 . - 0 ID=cds-EFB89432.1;Parent=gene-HMPREF7215_0200;Dbxref=NCBI_GP:EFB89432.1;Name=EFB89432.1;Note=identified by match to protein family HMM PF00254;gbkey=CDS;locus_tag=HMPREF7215_0200;product=peptidyl-prolyl cis-trans isomerase%2C FKBP-type;protein_id=EFB89432.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 59277 61211 . - . ID=gene-HMPREF7215_0201;Name=HMPREF7215_0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0201 GCA_000177335.1|ADFP01000135.1 Genbank CDS 59277 61211 . - 0 ID=cds-EFB89433.1;Parent=gene-HMPREF7215_0201;Dbxref=NCBI_GP:EFB89433.1;Name=EFB89433.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0201;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89433.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 61208 62203 . - . ID=gene-HMPREF7215_0202;Name=HMPREF7215_0202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0202 GCA_000177335.1|ADFP01000135.1 Genbank CDS 61208 62203 . - 0 ID=cds-EFB89434.1;Parent=gene-HMPREF7215_0202;Dbxref=NCBI_GP:EFB89434.1;Name=EFB89434.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0202;product=hypothetical protein;protein_id=EFB89434.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 62251 64647 . - . ID=gene-HMPREF7215_0203;Name=HMPREF7215_0203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0203 GCA_000177335.1|ADFP01000135.1 Genbank CDS 62251 64647 . - 0 ID=cds-EFB89435.1;Parent=gene-HMPREF7215_0203;Dbxref=NCBI_GP:EFB89435.1;Name=EFB89435.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0203;product=flavoprotein family protein;protein_id=EFB89435.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 64760 65344 . + . ID=gene-HMPREF7215_0204;Name=HMPREF7215_0204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0204 GCA_000177335.1|ADFP01000135.1 Genbank CDS 64760 65344 . + 0 ID=cds-EFB89436.1;Parent=gene-HMPREF7215_0204;Dbxref=NCBI_GP:EFB89436.1;Name=EFB89436.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=HMPREF7215_0204;product=isochorismatase family protein;protein_id=EFB89436.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 65382 66956 . + . ID=gene-HMPREF7215_0205;Name=HMPREF7215_0205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0205 GCA_000177335.1|ADFP01000135.1 Genbank CDS 65382 66956 . + 0 ID=cds-EFB89437.1;Parent=gene-HMPREF7215_0205;Dbxref=NCBI_GP:EFB89437.1;Name=EFB89437.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0205;product=hypothetical protein;protein_id=EFB89437.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 66992 67324 . + . ID=gene-HMPREF7215_0206;Name=HMPREF7215_0206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0206 GCA_000177335.1|ADFP01000135.1 Genbank CDS 66992 67324 . + 0 ID=cds-EFB89438.1;Parent=gene-HMPREF7215_0206;Dbxref=NCBI_GP:EFB89438.1;Name=EFB89438.1;Note=identified by match to protein family HMM PF01906;gbkey=CDS;locus_tag=HMPREF7215_0206;product=hypothetical protein;protein_id=EFB89438.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 67385 69544 . - . ID=gene-HMPREF7215_0207;Name=HMPREF7215_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0207 GCA_000177335.1|ADFP01000135.1 Genbank CDS 67385 69544 . - 0 ID=cds-EFB89439.1;Parent=gene-HMPREF7215_0207;Dbxref=NCBI_GP:EFB89439.1;Name=EFB89439.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371;gbkey=CDS;locus_tag=HMPREF7215_0207;product=Tex-like protein N-terminal domain protein;protein_id=EFB89439.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 69683 71617 . - . ID=gene-HMPREF7215_0208;Name=HMPREF7215_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0208 GCA_000177335.1|ADFP01000135.1 Genbank CDS 69683 71617 . - 0 ID=cds-EFB89440.1;Parent=gene-HMPREF7215_0208;Dbxref=NCBI_GP:EFB89440.1;Name=EFB89440.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;locus_tag=HMPREF7215_0208;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=EFB89440.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 71793 72791 . - . ID=gene-HMPREF7215_0209;Name=HMPREF7215_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0209 GCA_000177335.1|ADFP01000135.1 Genbank CDS 71793 72791 . - 0 ID=cds-EFB89441.1;Parent=gene-HMPREF7215_0209;Dbxref=NCBI_GP:EFB89441.1;Name=EFB89441.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_0209;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB89441.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 72934 73089 . + . ID=gene-HMPREF7215_0210;Name=HMPREF7215_0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0210 GCA_000177335.1|ADFP01000135.1 Genbank CDS 72934 73089 . + 0 ID=cds-EFB89442.1;Parent=gene-HMPREF7215_0210;Dbxref=NCBI_GP:EFB89442.1;Name=EFB89442.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0210;product=hypothetical protein;protein_id=EFB89442.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 73118 73756 . + . ID=gene-HMPREF7215_0211;Name=HMPREF7215_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0211 GCA_000177335.1|ADFP01000135.1 Genbank CDS 73118 73756 . + 0 ID=cds-EFB89443.1;Parent=gene-HMPREF7215_0211;Dbxref=NCBI_GP:EFB89443.1;Name=EFB89443.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=HMPREF7215_0211;product=HAD hydrolase%2C family IA%2C variant 1;protein_id=EFB89443.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 73753 75543 . + . ID=gene-HMPREF7215_0213;Name=HMPREF7215_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0213 GCA_000177335.1|ADFP01000135.1 Genbank CDS 73753 75543 . + 0 ID=cds-EFB89444.1;Parent=gene-HMPREF7215_0213;Dbxref=NCBI_GP:EFB89444.1;Name=EFB89444.1;gbkey=CDS;locus_tag=HMPREF7215_0213;product=hypothetical protein;protein_id=EFB89444.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 75538 75903 . - . ID=gene-HMPREF7215_0212;Name=HMPREF7215_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0212 GCA_000177335.1|ADFP01000135.1 Genbank CDS 75538 75903 . - 0 ID=cds-EFB89445.1;Parent=gene-HMPREF7215_0212;Dbxref=NCBI_GP:EFB89445.1;Name=EFB89445.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0212;product=hypothetical protein;protein_id=EFB89445.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 75937 78621 . + . ID=gene-HMPREF7215_0214;Name=HMPREF7215_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0214 GCA_000177335.1|ADFP01000135.1 Genbank CDS 75937 78621 . + 0 ID=cds-EFB89446.1;Parent=gene-HMPREF7215_0214;Dbxref=NCBI_GP:EFB89446.1;Name=EFB89446.1;Note=identified by match to protein family HMM PF02867%3B match to protein family HMM TIGR02504;gbkey=CDS;locus_tag=HMPREF7215_0214;product=ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent;protein_id=EFB89446.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 78701 78826 . - . ID=gene-HMPREF7215_0215;Name=HMPREF7215_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0215 GCA_000177335.1|ADFP01000135.1 Genbank CDS 78701 78826 . - 0 ID=cds-EFB89447.1;Parent=gene-HMPREF7215_0215;Dbxref=NCBI_GP:EFB89447.1;Name=EFB89447.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0215;product=hypothetical protein;protein_id=EFB89447.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 78785 80731 . + . ID=gene-HMPREF7215_0216;Name=HMPREF7215_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0216 GCA_000177335.1|ADFP01000135.1 Genbank CDS 78785 80731 . + 0 ID=cds-EFB89448.1;Parent=gene-HMPREF7215_0216;Dbxref=NCBI_GP:EFB89448.1;Name=EFB89448.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF07676;gbkey=CDS;locus_tag=HMPREF7215_0216;product=peptidase%2C S9A/B/C family%2C catalytic domain protein;protein_id=EFB89448.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 80835 81101 . - . ID=gene-HMPREF7215_0217;Name=HMPREF7215_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0217 GCA_000177335.1|ADFP01000135.1 Genbank CDS 80835 81101 . - 0 ID=cds-EFB89449.1;Parent=gene-HMPREF7215_0217;Dbxref=NCBI_GP:EFB89449.1;Name=EFB89449.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0217;product=hypothetical protein;protein_id=EFB89449.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 81195 81311 . - . ID=gene-HMPREF7215_0218;Name=HMPREF7215_0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0218 GCA_000177335.1|ADFP01000135.1 Genbank CDS 81195 81311 . - 0 ID=cds-EFB89450.1;Parent=gene-HMPREF7215_0218;Dbxref=NCBI_GP:EFB89450.1;Name=EFB89450.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0218;product=hypothetical protein;protein_id=EFB89450.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 81265 82659 . + . ID=gene-HMPREF7215_0219;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF7215_0219 GCA_000177335.1|ADFP01000135.1 Genbank CDS 81265 82659 . + 0 ID=cds-EFB89451.1;Parent=gene-HMPREF7215_0219;Dbxref=NCBI_GP:EFB89451.1;Name=EFB89451.1;Note=identified by match to protein family HMM TIGR01173;gbkey=CDS;gene=glmU;locus_tag=HMPREF7215_0219;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=EFB89451.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 82663 83634 . + . ID=gene-HMPREF7215_0220;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=HMPREF7215_0220 GCA_000177335.1|ADFP01000135.1 Genbank CDS 82663 83634 . + 0 ID=cds-EFB89452.1;Parent=gene-HMPREF7215_0220;Dbxref=NCBI_GP:EFB89452.1;Name=EFB89452.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;gene=prs;locus_tag=HMPREF7215_0220;product=ribose-phosphate diphosphokinase;protein_id=EFB89452.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 83684 83989 . + . ID=gene-HMPREF7215_0221;Name=HMPREF7215_0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0221 GCA_000177335.1|ADFP01000135.1 Genbank CDS 83684 83989 . + 0 ID=cds-EFB89453.1;Parent=gene-HMPREF7215_0221;Dbxref=NCBI_GP:EFB89453.1;Name=EFB89453.1;gbkey=CDS;locus_tag=HMPREF7215_0221;product=hypothetical protein;protein_id=EFB89453.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 83994 84587 . + . ID=gene-HMPREF7215_0222;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=HMPREF7215_0222 GCA_000177335.1|ADFP01000135.1 Genbank CDS 83994 84587 . + 0 ID=cds-EFB89454.1;Parent=gene-HMPREF7215_0222;Dbxref=NCBI_GP:EFB89454.1;Name=EFB89454.1;Note=identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447;gbkey=CDS;gene=pth;locus_tag=HMPREF7215_0222;product=aminoacyl-tRNA hydrolase;protein_id=EFB89454.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 84736 87708 . + . ID=gene-HMPREF7215_0223;Name=HMPREF7215_0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0223 GCA_000177335.1|ADFP01000135.1 Genbank CDS 84736 87708 . + 0 ID=cds-EFB89455.1;Parent=gene-HMPREF7215_0223;Dbxref=NCBI_GP:EFB89455.1;Name=EFB89455.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461;gbkey=CDS;locus_tag=HMPREF7215_0223;product=TRCF domain protein;protein_id=EFB89455.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 87736 88548 . + . ID=gene-HMPREF7215_0224;Name=HMPREF7215_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0224 GCA_000177335.1|ADFP01000135.1 Genbank CDS 87736 88548 . + 0 ID=cds-EFB89456.1;Parent=gene-HMPREF7215_0224;Dbxref=NCBI_GP:EFB89456.1;Name=EFB89456.1;Note=identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444;gbkey=CDS;locus_tag=HMPREF7215_0224;product=MazG family protein;protein_id=EFB89456.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 88621 90132 . + . ID=gene-HMPREF7215_0225;Name=HMPREF7215_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0225 GCA_000177335.1|ADFP01000135.1 Genbank CDS 88621 90132 . + 0 ID=cds-EFB89457.1;Parent=gene-HMPREF7215_0225;Dbxref=NCBI_GP:EFB89457.1;Name=EFB89457.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF02436;gbkey=CDS;locus_tag=HMPREF7215_0225;product=conserved carboxylase domain protein;protein_id=EFB89457.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 90283 91239 . + . ID=gene-HMPREF7215_0226;Name=HMPREF7215_0226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0226 GCA_000177335.1|ADFP01000135.1 Genbank CDS 90283 91239 . + 0 ID=cds-EFB89458.1;Parent=gene-HMPREF7215_0226;Dbxref=NCBI_GP:EFB89458.1;Name=EFB89458.1;Note=identified by match to protein family HMM PF02562;gbkey=CDS;locus_tag=HMPREF7215_0226;product=PhoH family protein;protein_id=EFB89458.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 91257 93365 . + . ID=gene-HMPREF7215_0227;Name=HMPREF7215_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0227 GCA_000177335.1|ADFP01000135.1 Genbank CDS 91257 93365 . + 0 ID=cds-EFB89459.1;Parent=gene-HMPREF7215_0227;Dbxref=NCBI_GP:EFB89459.1;Name=EFB89459.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;locus_tag=HMPREF7215_0227;product=HDIG domain protein;protein_id=EFB89459.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 93322 93894 . + . ID=gene-HMPREF7215_0228;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0228 GCA_000177335.1|ADFP01000135.1 Genbank CDS 93322 93894 . + 0 ID=cds-EFB89460.1;Parent=gene-HMPREF7215_0228;Dbxref=NCBI_GP:EFB89460.1;Name=EFB89460.1;Note=identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;gene=ybeY;locus_tag=HMPREF7215_0228;product=translation metalloprotein YbeY;protein_id=EFB89460.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 93891 95183 . + . ID=gene-HMPREF7215_0229;Name=HMPREF7215_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0229 GCA_000177335.1|ADFP01000135.1 Genbank CDS 93891 95183 . + 0 ID=cds-EFB89461.1;Parent=gene-HMPREF7215_0229;Dbxref=NCBI_GP:EFB89461.1;Name=EFB89461.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF7215_0229;product=hypothetical protein;protein_id=EFB89461.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 95187 96452 . + . ID=gene-HMPREF7215_0230;Name=HMPREF7215_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0230 GCA_000177335.1|ADFP01000135.1 Genbank CDS 95187 96452 . + 0 ID=cds-EFB89462.1;Parent=gene-HMPREF7215_0230;Dbxref=NCBI_GP:EFB89462.1;Name=EFB89462.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF7215_0230;product=hypothetical protein;protein_id=EFB89462.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 96459 97370 . + . ID=gene-HMPREF7215_0231;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=HMPREF7215_0231 GCA_000177335.1|ADFP01000135.1 Genbank CDS 96459 97370 . + 0 ID=cds-EFB89463.1;Parent=gene-HMPREF7215_0231;Dbxref=NCBI_GP:EFB89463.1;Name=EFB89463.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436;gbkey=CDS;gene=era;locus_tag=HMPREF7215_0231;product=ribosome biogenesis GTPase Era;protein_id=EFB89463.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 97325 98068 . + . ID=gene-HMPREF7215_0232;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=HMPREF7215_0232 GCA_000177335.1|ADFP01000135.1 Genbank CDS 97325 98068 . + 0 ID=cds-EFB89464.1;Parent=gene-HMPREF7215_0232;Dbxref=NCBI_GP:EFB89464.1;Name=EFB89464.1;Note=identified by match to protein family HMM PF02565;gbkey=CDS;gene=recO;locus_tag=HMPREF7215_0232;product=DNA repair protein RecO;protein_id=EFB89464.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 98093 98965 . + . ID=gene-HMPREF7215_0233;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0233 GCA_000177335.1|ADFP01000135.1 Genbank CDS 98093 98965 . + 0 ID=cds-EFB89465.1;Parent=gene-HMPREF7215_0233;Dbxref=NCBI_GP:EFB89465.1;Name=EFB89465.1;Note=identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388;gbkey=CDS;gene=glyQ;locus_tag=HMPREF7215_0233;product=glycine--tRNA ligase%2C alpha subunit;protein_id=EFB89465.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 98980 101037 . + . ID=gene-HMPREF7215_0234;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0234 GCA_000177335.1|ADFP01000135.1 Genbank CDS 98980 101037 . + 0 ID=cds-EFB89466.1;Parent=gene-HMPREF7215_0234;Dbxref=NCBI_GP:EFB89466.1;Name=EFB89466.1;Note=identified by match to protein family HMM PF02092%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00211%3B match to protein family HMM TIGR00277;gbkey=CDS;gene=glyS;locus_tag=HMPREF7215_0234;product=glycine--tRNA ligase%2C beta subunit;protein_id=EFB89466.1;transl_table=11 GCA_000177335.1|ADFP01000135.1 Genbank gene 101053 101859 . + . ID=gene-HMPREF7215_0235;Name=HMPREF7215_0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0235 GCA_000177335.1|ADFP01000135.1 Genbank CDS 101053 101859 . + 0 ID=cds-EFB89467.1;Parent=gene-HMPREF7215_0235;Dbxref=NCBI_GP:EFB89467.1;Name=EFB89467.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03618;gbkey=CDS;locus_tag=HMPREF7215_0235;product=hypothetical protein;protein_id=EFB89467.1;transl_table=11 ##sequence-region ADFP01000134.1 1 15806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000134.1 Genbank region 1 15806 . + . ID=ADFP01000134.1:1..15806;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000134.1 Genbank gene 1 202 . - . ID=gene-HMPREF7215_1294;Name=HMPREF7215_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1294;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000134.1 Genbank CDS 1 202 . - 0 ID=cds-EFB89468.1;Parent=gene-HMPREF7215_1294;Dbxref=NCBI_GP:EFB89468.1;Name=EFB89468.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1294;partial=true;product=hypothetical protein;protein_id=EFB89468.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 448 1692 . - . ID=gene-HMPREF7215_1295;Name=HMPREF7215_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1295 GCA_000177335.1|ADFP01000134.1 Genbank CDS 448 1692 . - 0 ID=cds-EFB89469.1;Parent=gene-HMPREF7215_1295;Dbxref=NCBI_GP:EFB89469.1;Name=EFB89469.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00657;gbkey=CDS;locus_tag=HMPREF7215_1295;product=aspartate kinase;protein_id=EFB89469.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 1696 2394 . - . ID=gene-HMPREF7215_1296;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1296 GCA_000177335.1|ADFP01000134.1 Genbank CDS 1696 2394 . - 0 ID=cds-EFB89470.1;Parent=gene-HMPREF7215_1296;Dbxref=NCBI_GP:EFB89470.1;Name=EFB89470.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF08503%3B match to protein family HMM TIGR03532;gbkey=CDS;gene=dapD;locus_tag=HMPREF7215_1296;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=EFB89470.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 2422 3069 . - . ID=gene-HMPREF7215_1297;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1297 GCA_000177335.1|ADFP01000134.1 Genbank CDS 2422 3069 . - 0 ID=cds-EFB89471.1;Parent=gene-HMPREF7215_1297;Dbxref=NCBI_GP:EFB89471.1;Name=EFB89471.1;Note=identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036;gbkey=CDS;gene=dapB;locus_tag=HMPREF7215_1297;product=dihydrodipicolinate reductase;protein_id=EFB89471.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 3069 3959 . - . ID=gene-HMPREF7215_1298;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1298 GCA_000177335.1|ADFP01000134.1 Genbank CDS 3069 3959 . - 0 ID=cds-EFB89472.1;Parent=gene-HMPREF7215_1298;Dbxref=NCBI_GP:EFB89472.1;Name=EFB89472.1;Note=identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA;locus_tag=HMPREF7215_1298;product=dihydrodipicolinate synthase;protein_id=EFB89472.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 4203 5315 . - . ID=gene-HMPREF7215_1299;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=HMPREF7215_1299 GCA_000177335.1|ADFP01000134.1 Genbank CDS 4203 5315 . - 0 ID=cds-EFB89473.1;Parent=gene-HMPREF7215_1299;Dbxref=NCBI_GP:EFB89473.1;Name=EFB89473.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296;gbkey=CDS;gene=asd;locus_tag=HMPREF7215_1299;product=aspartate-semialdehyde dehydrogenase;protein_id=EFB89473.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 5483 5731 . - . ID=gene-HMPREF7215_1300;Name=HMPREF7215_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1300 GCA_000177335.1|ADFP01000134.1 Genbank CDS 5483 5731 . - 0 ID=cds-EFB89474.1;Parent=gene-HMPREF7215_1300;Dbxref=NCBI_GP:EFB89474.1;Name=EFB89474.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1300;product=hypothetical protein;protein_id=EFB89474.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 5718 7100 . - . ID=gene-HMPREF7215_1301;Name=HMPREF7215_1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1301 GCA_000177335.1|ADFP01000134.1 Genbank CDS 5718 7100 . - 0 ID=cds-EFB89475.1;Parent=gene-HMPREF7215_1301;Dbxref=NCBI_GP:EFB89475.1;Name=EFB89475.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_1301;product=MATE efflux family protein;protein_id=EFB89475.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 7382 8581 . - . ID=gene-HMPREF7215_1302;Name=HMPREF7215_1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1302 GCA_000177335.1|ADFP01000134.1 Genbank CDS 7382 8581 . - 0 ID=cds-EFB89476.1;Parent=gene-HMPREF7215_1302;Dbxref=NCBI_GP:EFB89476.1;Name=EFB89476.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=HMPREF7215_1302;product=transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein;protein_id=EFB89476.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 8594 8710 . - . ID=gene-HMPREF7215_1303;Name=HMPREF7215_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1303 GCA_000177335.1|ADFP01000134.1 Genbank CDS 8594 8710 . - 0 ID=cds-EFB89477.1;Parent=gene-HMPREF7215_1303;Dbxref=NCBI_GP:EFB89477.1;Name=EFB89477.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1303;product=hypothetical protein;protein_id=EFB89477.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 8915 10363 . + . ID=gene-HMPREF7215_1304;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1304 GCA_000177335.1|ADFP01000134.1 Genbank CDS 8915 10363 . + 0 ID=cds-EFB89478.1;Parent=gene-HMPREF7215_1304;Dbxref=NCBI_GP:EFB89478.1;Name=EFB89478.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;gene=abgB;locus_tag=HMPREF7215_1304;product=aminobenzoyl-glutamate utilization protein B;protein_id=EFB89478.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 10489 11196 . - . ID=gene-HMPREF7215_1305;Name=HMPREF7215_1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1305 GCA_000177335.1|ADFP01000134.1 Genbank CDS 10489 11196 . - 0 ID=cds-EFB89479.1;Parent=gene-HMPREF7215_1305;Dbxref=NCBI_GP:EFB89479.1;Name=EFB89479.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035;gbkey=CDS;locus_tag=HMPREF7215_1305;product=aspartate racemase;protein_id=EFB89479.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 11250 11381 . - . ID=gene-HMPREF7215_1306;Name=HMPREF7215_1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1306 GCA_000177335.1|ADFP01000134.1 Genbank CDS 11250 11381 . - 0 ID=cds-EFB89480.1;Parent=gene-HMPREF7215_1306;Dbxref=NCBI_GP:EFB89480.1;Name=EFB89480.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1306;product=hypothetical protein;protein_id=EFB89480.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 11382 12443 . + . ID=gene-HMPREF7215_1307;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=HMPREF7215_1307 GCA_000177335.1|ADFP01000134.1 Genbank CDS 11382 12443 . + 0 ID=cds-EFB89481.1;Parent=gene-HMPREF7215_1307;Dbxref=NCBI_GP:EFB89481.1;Name=EFB89481.1;Note=identified by match to protein family HMM PF02277%3B match to protein family HMM TIGR03160;gbkey=CDS;gene=cobT;locus_tag=HMPREF7215_1307;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=EFB89481.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 12586 12906 . + . ID=gene-HMPREF7215_1308;Name=HMPREF7215_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1308 GCA_000177335.1|ADFP01000134.1 Genbank CDS 12586 12906 . + 0 ID=cds-EFB89482.1;Parent=gene-HMPREF7215_1308;Dbxref=NCBI_GP:EFB89482.1;Name=EFB89482.1;Note=identified by match to protein family HMM PF04071;gbkey=CDS;locus_tag=HMPREF7215_1308;product=Cysteine-rich small domain protein;protein_id=EFB89482.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 12959 13480 . + . ID=gene-HMPREF7215_1309;Name=HMPREF7215_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1309 GCA_000177335.1|ADFP01000134.1 Genbank CDS 12959 13480 . + 0 ID=cds-EFB89483.1;Parent=gene-HMPREF7215_1309;Dbxref=NCBI_GP:EFB89483.1;Name=EFB89483.1;gbkey=CDS;locus_tag=HMPREF7215_1309;product=putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=EFB89483.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 13468 14256 . + . ID=gene-HMPREF7215_1310;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=HMPREF7215_1310 GCA_000177335.1|ADFP01000134.1 Genbank CDS 13468 14256 . + 0 ID=cds-EFB89484.1;Parent=gene-HMPREF7215_1310;Dbxref=NCBI_GP:EFB89484.1;Name=EFB89484.1;Note=identified by match to protein family HMM PF02654;gbkey=CDS;gene=cobS;locus_tag=HMPREF7215_1310;product=cobalamin-5-phosphate synthase;protein_id=EFB89484.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 14241 14819 . + . ID=gene-HMPREF7215_1311;Name=HMPREF7215_1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1311 GCA_000177335.1|ADFP01000134.1 Genbank CDS 14241 14819 . + 0 ID=cds-EFB89485.1;Parent=gene-HMPREF7215_1311;Dbxref=NCBI_GP:EFB89485.1;Name=EFB89485.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF7215_1311;product=phosphoglycerate mutase family protein;protein_id=EFB89485.1;transl_table=11 GCA_000177335.1|ADFP01000134.1 Genbank gene 14816 15790 . + . ID=gene-HMPREF7215_1312;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1312 GCA_000177335.1|ADFP01000134.1 Genbank CDS 14816 15790 . + 0 ID=cds-EFB89486.1;Parent=gene-HMPREF7215_1312;Dbxref=NCBI_GP:EFB89486.1;Name=EFB89486.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03186%3B match to protein family HMM TIGR00380;gbkey=CDS;gene=cobD;locus_tag=HMPREF7215_1312;product=cobalamin biosynthesis protein CobD;protein_id=EFB89486.1;transl_table=11 ##sequence-region ADFP01000133.1 1 12107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000133.1 Genbank region 1 12107 . + . ID=ADFP01000133.1:1..12107;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000133.1 Genbank gene 1 397 . + . ID=gene-HMPREF7215_1725;Name=HMPREF7215_1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1725;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000133.1 Genbank CDS 1 397 . + 1 ID=cds-EFB89487.1;Parent=gene-HMPREF7215_1725;Dbxref=NCBI_GP:EFB89487.1;Name=EFB89487.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1725;partial=true;product=hypothetical protein;protein_id=EFB89487.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 438 662 . + . ID=gene-HMPREF7215_1726;Name=HMPREF7215_1726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1726 GCA_000177335.1|ADFP01000133.1 Genbank CDS 438 662 . + 0 ID=cds-EFB89488.1;Parent=gene-HMPREF7215_1726;Dbxref=NCBI_GP:EFB89488.1;Name=EFB89488.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1726;product=hypothetical protein;protein_id=EFB89488.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 659 1468 . + . ID=gene-HMPREF7215_1727;Name=HMPREF7215_1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1727 GCA_000177335.1|ADFP01000133.1 Genbank CDS 659 1468 . + 0 ID=cds-EFB89489.1;Parent=gene-HMPREF7215_1727;Dbxref=NCBI_GP:EFB89489.1;Name=EFB89489.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_1727;product=aminotransferase%2C class I/II;protein_id=EFB89489.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 1509 1640 . - . ID=gene-HMPREF7215_1728;Name=HMPREF7215_1728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1728 GCA_000177335.1|ADFP01000133.1 Genbank CDS 1509 1640 . - 0 ID=cds-EFB89490.1;Parent=gene-HMPREF7215_1728;Dbxref=NCBI_GP:EFB89490.1;Name=EFB89490.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1728;product=hypothetical protein;protein_id=EFB89490.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 1842 2483 . - . ID=gene-HMPREF7215_1729;Name=HMPREF7215_1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1729 GCA_000177335.1|ADFP01000133.1 Genbank CDS 1842 2483 . - 0 ID=cds-EFB89491.1;Parent=gene-HMPREF7215_1729;Dbxref=NCBI_GP:EFB89491.1;Name=EFB89491.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1729;product=hypothetical protein;protein_id=EFB89491.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 2509 3555 . - . ID=gene-HMPREF7215_1730;Name=HMPREF7215_1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1730 GCA_000177335.1|ADFP01000133.1 Genbank CDS 2509 3555 . - 0 ID=cds-EFB89492.1;Parent=gene-HMPREF7215_1730;Dbxref=NCBI_GP:EFB89492.1;Name=EFB89492.1;gbkey=CDS;locus_tag=HMPREF7215_1730;product=hypothetical protein;protein_id=EFB89492.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 3593 4921 . - . ID=gene-HMPREF7215_1731;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1731 GCA_000177335.1|ADFP01000133.1 Genbank CDS 3593 4921 . - 0 ID=cds-EFB89493.1;Parent=gene-HMPREF7215_1731;Dbxref=NCBI_GP:EFB89493.1;Name=EFB89493.1;Note=identified by match to protein family HMM PF02133;gbkey=CDS;gene=codB;locus_tag=HMPREF7215_1731;product=cytosine permease;protein_id=EFB89493.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 5175 6839 . - . ID=gene-HMPREF7215_1732;Name=HMPREF7215_1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1732 GCA_000177335.1|ADFP01000133.1 Genbank CDS 5175 6839 . - 0 ID=cds-EFB89494.1;Parent=gene-HMPREF7215_1732;Dbxref=NCBI_GP:EFB89494.1;Name=EFB89494.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1732;product=purine catabolism regulatory protein-like family;protein_id=EFB89494.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 7104 8315 . - . ID=gene-HMPREF7215_1733;Name=HMPREF7215_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1733 GCA_000177335.1|ADFP01000133.1 Genbank CDS 7104 8315 . - 0 ID=cds-EFB89495.1;Parent=gene-HMPREF7215_1733;Dbxref=NCBI_GP:EFB89495.1;Name=EFB89495.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1733;product=amidohydrolase;protein_id=EFB89495.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 8408 9451 . - . ID=gene-HMPREF7215_1734;Name=HMPREF7215_1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1734 GCA_000177335.1|ADFP01000133.1 Genbank CDS 8408 9451 . - 0 ID=cds-EFB89496.1;Parent=gene-HMPREF7215_1734;Dbxref=NCBI_GP:EFB89496.1;Name=EFB89496.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_1734;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB89496.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 9636 11048 . - . ID=gene-HMPREF7215_1735;Name=HMPREF7215_1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1735 GCA_000177335.1|ADFP01000133.1 Genbank CDS 9636 11048 . - 0 ID=cds-EFB89497.1;Parent=gene-HMPREF7215_1735;Dbxref=NCBI_GP:EFB89497.1;Name=EFB89497.1;Note=identified by match to protein family HMM PF03606;gbkey=CDS;locus_tag=HMPREF7215_1735;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB89497.1;transl_table=11 GCA_000177335.1|ADFP01000133.1 Genbank gene 11112 12107 . - . ID=gene-HMPREF7215_1736;Name=HMPREF7215_1736;end_range=12107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1736;partial=true GCA_000177335.1|ADFP01000133.1 Genbank CDS 11112 12107 . - 0 ID=cds-EFB89498.1;Parent=gene-HMPREF7215_1736;Dbxref=NCBI_GP:EFB89498.1;Name=EFB89498.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01546;end_range=12107,.;gbkey=CDS;locus_tag=HMPREF7215_1736;partial=true;product=amidohydrolase;protein_id=EFB89498.1;transl_table=11 ##sequence-region ADFP01000132.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000132.1 Genbank region 1 762 . + . ID=ADFP01000132.1:1..762;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000132.1 Genbank pseudogene 1 762 . + . ID=gene-HMPREF7215_0002;Name=HMPREF7215_0002;Note=hypothetical protein%3B this region was identified as a potential CDS%3Bidentified by glimmer%3B putative;end_range=762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF7215_0002;partial=true;pseudo=true;start_range=.,1 ##sequence-region ADFP01000131.1 1 8671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000131.1 Genbank region 1 8671 . + . ID=ADFP01000131.1:1..8671;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000131.1 Genbank gene 1 393 . + . ID=gene-HMPREF7215_0780;Name=HMPREF7215_0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0780;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000131.1 Genbank CDS 1 393 . + 0 ID=cds-EFB89499.1;Parent=gene-HMPREF7215_0780;Dbxref=NCBI_GP:EFB89499.1;Name=EFB89499.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_0780;partial=true;product=ankyrin repeat protein;protein_id=EFB89499.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 516 1376 . - . ID=gene-HMPREF7215_0781;Name=HMPREF7215_0781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0781 GCA_000177335.1|ADFP01000131.1 Genbank CDS 516 1376 . - 0 ID=cds-EFB89500.1;Parent=gene-HMPREF7215_0781;Dbxref=NCBI_GP:EFB89500.1;Name=EFB89500.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=HMPREF7215_0781;product=Cof-like hydrolase;protein_id=EFB89500.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 1523 1750 . + . ID=gene-HMPREF7215_0782;Name=HMPREF7215_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0782 GCA_000177335.1|ADFP01000131.1 Genbank CDS 1523 1750 . + 0 ID=cds-EFB89501.1;Parent=gene-HMPREF7215_0782;Dbxref=NCBI_GP:EFB89501.1;Name=EFB89501.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0782;product=hypothetical protein;protein_id=EFB89501.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 1705 1902 . + . ID=gene-HMPREF7215_0783;Name=HMPREF7215_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0783 GCA_000177335.1|ADFP01000131.1 Genbank CDS 1705 1902 . + 0 ID=cds-EFB89502.1;Parent=gene-HMPREF7215_0783;Dbxref=NCBI_GP:EFB89502.1;Name=EFB89502.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0783;product=hypothetical protein;protein_id=EFB89502.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 1985 3514 . - . ID=gene-HMPREF7215_0784;Name=HMPREF7215_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0784 GCA_000177335.1|ADFP01000131.1 Genbank CDS 1985 3514 . - 0 ID=cds-EFB89503.1;Parent=gene-HMPREF7215_0784;Dbxref=NCBI_GP:EFB89503.1;Name=EFB89503.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0784;product=hypothetical protein;protein_id=EFB89503.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 3762 4190 . + . ID=gene-HMPREF7215_0785;Name=HMPREF7215_0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0785 GCA_000177335.1|ADFP01000131.1 Genbank CDS 3762 4190 . + 0 ID=cds-EFB89504.1;Parent=gene-HMPREF7215_0785;Dbxref=NCBI_GP:EFB89504.1;Name=EFB89504.1;gbkey=CDS;locus_tag=HMPREF7215_0785;product=hypothetical protein;protein_id=EFB89504.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 4339 4758 . + . ID=gene-HMPREF7215_0786;Name=HMPREF7215_0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0786 GCA_000177335.1|ADFP01000131.1 Genbank CDS 4339 4758 . + 0 ID=cds-EFB89505.1;Parent=gene-HMPREF7215_0786;Dbxref=NCBI_GP:EFB89505.1;Name=EFB89505.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0786;product=hypothetical protein;protein_id=EFB89505.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 4777 5211 . + . ID=gene-HMPREF7215_0787;Name=HMPREF7215_0787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0787 GCA_000177335.1|ADFP01000131.1 Genbank CDS 4777 5211 . + 0 ID=cds-EFB89506.1;Parent=gene-HMPREF7215_0787;Dbxref=NCBI_GP:EFB89506.1;Name=EFB89506.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0787;product=hypothetical protein;protein_id=EFB89506.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 5221 6561 . + . ID=gene-HMPREF7215_0788;Name=HMPREF7215_0788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0788 GCA_000177335.1|ADFP01000131.1 Genbank CDS 5221 6561 . + 0 ID=cds-EFB89507.1;Parent=gene-HMPREF7215_0788;Dbxref=NCBI_GP:EFB89507.1;Name=EFB89507.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0788;product=hypothetical protein;protein_id=EFB89507.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 6613 6759 . - . ID=gene-HMPREF7215_0789;Name=HMPREF7215_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0789 GCA_000177335.1|ADFP01000131.1 Genbank CDS 6613 6759 . - 0 ID=cds-EFB89508.1;Parent=gene-HMPREF7215_0789;Dbxref=NCBI_GP:EFB89508.1;Name=EFB89508.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0789;product=hypothetical protein;protein_id=EFB89508.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 6811 8385 . + . ID=gene-HMPREF7215_0790;Name=HMPREF7215_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0790 GCA_000177335.1|ADFP01000131.1 Genbank CDS 6811 8385 . + 0 ID=cds-EFB89509.1;Parent=gene-HMPREF7215_0790;Dbxref=NCBI_GP:EFB89509.1;Name=EFB89509.1;gbkey=CDS;locus_tag=HMPREF7215_0790;product=hypothetical protein;protein_id=EFB89509.1;transl_table=11 GCA_000177335.1|ADFP01000131.1 Genbank gene 8382 8671 . + . ID=gene-HMPREF7215_0791;Name=HMPREF7215_0791;end_range=8671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0791;partial=true GCA_000177335.1|ADFP01000131.1 Genbank CDS 8382 8671 . + 0 ID=cds-EFB89510.1;Parent=gene-HMPREF7215_0791;Dbxref=NCBI_GP:EFB89510.1;Name=EFB89510.1;Note=identified by glimmer%3B putative;end_range=8671,.;gbkey=CDS;locus_tag=HMPREF7215_0791;partial=true;product=hypothetical protein;protein_id=EFB89510.1;transl_table=11 ##sequence-region ADFP01000130.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000130.1 Genbank region 1 749 . + . ID=ADFP01000130.1:1..749;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000130.1 Genbank gene 1 733 . - . ID=gene-HMPREF7215_1671;Name=HMPREF7215_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1671;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000130.1 Genbank CDS 1 733 . - 0 ID=cds-EFB89511.1;Parent=gene-HMPREF7215_1671;Dbxref=NCBI_GP:EFB89511.1;Name=EFB89511.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_1671;partial=true;product=ankyrin repeat protein;protein_id=EFB89511.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000129.1 1 32244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000129.1 Genbank region 1 32244 . + . ID=ADFP01000129.1:1..32244;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000129.1 Genbank gene 307 426 . - . ID=gene-HMPREF7215_0005;Name=HMPREF7215_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0005 GCA_000177335.1|ADFP01000129.1 Genbank CDS 307 426 . - 0 ID=cds-EFB89512.1;Parent=gene-HMPREF7215_0005;Dbxref=NCBI_GP:EFB89512.1;Name=EFB89512.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0005;product=hypothetical protein;protein_id=EFB89512.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 531 4097 . + . ID=gene-HMPREF7215_0006;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0006 GCA_000177335.1|ADFP01000129.1 Genbank CDS 531 4097 . + 0 ID=cds-EFB89513.1;Parent=gene-HMPREF7215_0006;Dbxref=NCBI_GP:EFB89513.1;Name=EFB89513.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF7215_0006;product=pyruvate synthase;protein_id=EFB89513.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 4444 5028 . + . ID=gene-HMPREF7215_0007;Name=HMPREF7215_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0007 GCA_000177335.1|ADFP01000129.1 Genbank CDS 4444 5028 . + 0 ID=cds-EFB89514.1;Parent=gene-HMPREF7215_0007;Dbxref=NCBI_GP:EFB89514.1;Name=EFB89514.1;gbkey=CDS;locus_tag=HMPREF7215_0007;product=hypothetical protein;protein_id=EFB89514.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 5030 5950 . + . ID=gene-HMPREF7215_0008;Name=HMPREF7215_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0008 GCA_000177335.1|ADFP01000129.1 Genbank CDS 5030 5950 . + 0 ID=cds-EFB89515.1;Parent=gene-HMPREF7215_0008;Dbxref=NCBI_GP:EFB89515.1;Name=EFB89515.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;locus_tag=HMPREF7215_0008;product=Ppx/GppA phosphatase family protein;protein_id=EFB89515.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 6018 6977 . + . ID=gene-HMPREF7215_0009;Name=HMPREF7215_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0009 GCA_000177335.1|ADFP01000129.1 Genbank CDS 6018 6977 . + 0 ID=cds-EFB89516.1;Parent=gene-HMPREF7215_0009;Dbxref=NCBI_GP:EFB89516.1;Name=EFB89516.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_0009;product=hypothetical protein;protein_id=EFB89516.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 7013 7642 . + . ID=gene-HMPREF7215_0010;Name=HMPREF7215_0010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0010 GCA_000177335.1|ADFP01000129.1 Genbank CDS 7013 7642 . + 0 ID=cds-EFB89517.1;Parent=gene-HMPREF7215_0010;Dbxref=NCBI_GP:EFB89517.1;Name=EFB89517.1;gbkey=CDS;locus_tag=HMPREF7215_0010;product=hypothetical protein;protein_id=EFB89517.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 7658 9154 . + . ID=gene-HMPREF7215_0011;Name=HMPREF7215_0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0011 GCA_000177335.1|ADFP01000129.1 Genbank CDS 7658 9154 . + 0 ID=cds-EFB89518.1;Parent=gene-HMPREF7215_0011;Dbxref=NCBI_GP:EFB89518.1;Name=EFB89518.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_0011;product=membrane protein;protein_id=EFB89518.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 9201 10844 . + . ID=gene-HMPREF7215_0012;Name=HMPREF7215_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0012 GCA_000177335.1|ADFP01000129.1 Genbank CDS 9201 10844 . + 0 ID=cds-EFB89519.1;Parent=gene-HMPREF7215_0012;Dbxref=NCBI_GP:EFB89519.1;Name=EFB89519.1;Note=identified by match to protein family HMM PF02690;gbkey=CDS;locus_tag=HMPREF7215_0012;product=putative Na/Pi-cotransporter II-like protein;protein_id=EFB89519.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 10834 11604 . + . ID=gene-HMPREF7215_0013;Name=HMPREF7215_0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0013 GCA_000177335.1|ADFP01000129.1 Genbank CDS 10834 11604 . + 0 ID=cds-EFB89520.1;Parent=gene-HMPREF7215_0013;Dbxref=NCBI_GP:EFB89520.1;Name=EFB89520.1;Note=identified by match to protein family HMM PF01895;gbkey=CDS;locus_tag=HMPREF7215_0013;product=putative phosphate transport system regulatory protein PhoU;protein_id=EFB89520.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 11966 13474 . + . ID=gene-HMPREF7215_0014;Name=HMPREF7215_0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0014 GCA_000177335.1|ADFP01000129.1 Genbank CDS 11966 13474 . + 0 ID=cds-EFB89521.1;Parent=gene-HMPREF7215_0014;Dbxref=NCBI_GP:EFB89521.1;Name=EFB89521.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF7215_0014;product=peptidase%2C M23 family;protein_id=EFB89521.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 13506 14567 . + . ID=gene-HMPREF7215_0015;Name=HMPREF7215_0015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0015 GCA_000177335.1|ADFP01000129.1 Genbank CDS 13506 14567 . + 0 ID=cds-EFB89522.1;Parent=gene-HMPREF7215_0015;Dbxref=NCBI_GP:EFB89522.1;Name=EFB89522.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0015;product=hypothetical protein;protein_id=EFB89522.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 14722 15135 . + . ID=gene-HMPREF7215_0016;Name=HMPREF7215_0016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0016 GCA_000177335.1|ADFP01000129.1 Genbank CDS 14722 15135 . + 0 ID=cds-EFB89523.1;Parent=gene-HMPREF7215_0016;Dbxref=NCBI_GP:EFB89523.1;Name=EFB89523.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0016;product=hypothetical protein;protein_id=EFB89523.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 15132 16967 . + . ID=gene-HMPREF7215_0017;Name=HMPREF7215_0017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0017 GCA_000177335.1|ADFP01000129.1 Genbank CDS 15132 16967 . + 0 ID=cds-EFB89524.1;Parent=gene-HMPREF7215_0017;Dbxref=NCBI_GP:EFB89524.1;Name=EFB89524.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0017;product=hypothetical protein;protein_id=EFB89524.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 17017 17145 . - . ID=gene-HMPREF7215_0018;Name=HMPREF7215_0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0018 GCA_000177335.1|ADFP01000129.1 Genbank CDS 17017 17145 . - 0 ID=cds-EFB89525.1;Parent=gene-HMPREF7215_0018;Dbxref=NCBI_GP:EFB89525.1;Name=EFB89525.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0018;product=hypothetical protein;protein_id=EFB89525.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 17211 17705 . - . ID=gene-HMPREF7215_0019;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0019 GCA_000177335.1|ADFP01000129.1 Genbank CDS 17211 17705 . - 0 ID=cds-EFB89526.1;Parent=gene-HMPREF7215_0019;Dbxref=NCBI_GP:EFB89526.1;Name=EFB89526.1;Note=identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;gene=greA;locus_tag=HMPREF7215_0019;product=transcription elongation factor GreA;protein_id=EFB89526.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 17830 19644 . + . ID=gene-HMPREF7215_0020;Name=HMPREF7215_0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0020 GCA_000177335.1|ADFP01000129.1 Genbank CDS 17830 19644 . + 0 ID=cds-EFB89527.1;Parent=gene-HMPREF7215_0020;Dbxref=NCBI_GP:EFB89527.1;Name=EFB89527.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B 3.1.-.-;gbkey=CDS;locus_tag=HMPREF7215_0020;product=hypothetical protein;protein_id=EFB89527.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 19707 20516 . + . ID=gene-HMPREF7215_0021;Name=HMPREF7215_0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0021 GCA_000177335.1|ADFP01000129.1 Genbank CDS 19707 20516 . + 0 ID=cds-EFB89528.1;Parent=gene-HMPREF7215_0021;Dbxref=NCBI_GP:EFB89528.1;Name=EFB89528.1;Note=identified by match to protein family HMM PF02673;gbkey=CDS;locus_tag=HMPREF7215_0021;product=undecaprenyl pyrophosphate phosphatase;protein_id=EFB89528.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 20477 21118 . + . ID=gene-HMPREF7215_0022;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=HMPREF7215_0022 GCA_000177335.1|ADFP01000129.1 Genbank CDS 20477 21118 . + 0 ID=cds-EFB89529.1;Parent=gene-HMPREF7215_0022;Dbxref=NCBI_GP:EFB89529.1;Name=EFB89529.1;Note=identified by match to protein family HMM PF02545;gbkey=CDS;gene=maf;locus_tag=HMPREF7215_0022;product=septum formation protein Maf;protein_id=EFB89529.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 21115 23025 . + . ID=gene-HMPREF7215_0023;Name=HMPREF7215_0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0023 GCA_000177335.1|ADFP01000129.1 Genbank CDS 21115 23025 . + 0 ID=cds-EFB89530.1;Parent=gene-HMPREF7215_0023;Dbxref=NCBI_GP:EFB89530.1;Name=EFB89530.1;Note=identified by match to protein family HMM TIGR01409;gbkey=CDS;locus_tag=HMPREF7215_0023;product=Tat pathway signal sequence domain protein;protein_id=EFB89530.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 23028 24020 . + . ID=gene-HMPREF7215_0024;Name=HMPREF7215_0024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0024 GCA_000177335.1|ADFP01000129.1 Genbank CDS 23028 24020 . + 0 ID=cds-EFB89531.1;Parent=gene-HMPREF7215_0024;Dbxref=NCBI_GP:EFB89531.1;Name=EFB89531.1;Note=identified by match to protein family HMM PF04230;gbkey=CDS;locus_tag=HMPREF7215_0024;product=putative polysaccharide pyruvyl transferase CsaB;protein_id=EFB89531.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 24080 24775 . + . ID=gene-HMPREF7215_0025;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0025 GCA_000177335.1|ADFP01000129.1 Genbank CDS 24080 24775 . + 0 ID=cds-EFB89532.1;Parent=gene-HMPREF7215_0025;Dbxref=NCBI_GP:EFB89532.1;Name=EFB89532.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=ftsE;locus_tag=HMPREF7215_0025;product=putative cell division ATP-binding protein FtsE;protein_id=EFB89532.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 24762 25646 . + . ID=gene-HMPREF7215_0026;Name=HMPREF7215_0026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0026 GCA_000177335.1|ADFP01000129.1 Genbank CDS 24762 25646 . + 0 ID=cds-EFB89533.1;Parent=gene-HMPREF7215_0026;Dbxref=NCBI_GP:EFB89533.1;Name=EFB89533.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF7215_0026;product=efflux ABC transporter%2C permease protein;protein_id=EFB89533.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 25657 26856 . + . ID=gene-HMPREF7215_0027;Name=HMPREF7215_0027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0027 GCA_000177335.1|ADFP01000129.1 Genbank CDS 25657 26856 . + 0 ID=cds-EFB89534.1;Parent=gene-HMPREF7215_0027;Dbxref=NCBI_GP:EFB89534.1;Name=EFB89534.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF7215_0027;product=peptidase%2C M23 family;protein_id=EFB89534.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 26890 28347 . + . ID=gene-HMPREF7215_0028;Name=HMPREF7215_0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0028 GCA_000177335.1|ADFP01000129.1 Genbank CDS 26890 28347 . + 0 ID=cds-EFB89535.1;Parent=gene-HMPREF7215_0028;Dbxref=NCBI_GP:EFB89535.1;Name=EFB89535.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225;gbkey=CDS;locus_tag=HMPREF7215_0028;product=peptidase%2C S41 family;protein_id=EFB89535.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 28344 29315 . + . ID=gene-HMPREF7215_0029;Name=HMPREF7215_0029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0029 GCA_000177335.1|ADFP01000129.1 Genbank CDS 28344 29315 . + 0 ID=cds-EFB89536.1;Parent=gene-HMPREF7215_0029;Dbxref=NCBI_GP:EFB89536.1;Name=EFB89536.1;Note=identified by match to protein family HMM PF04748;gbkey=CDS;locus_tag=HMPREF7215_0029;product=divergent polysaccharide deacetylase;protein_id=EFB89536.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 29312 30598 . + . ID=gene-HMPREF7215_0030;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0030 GCA_000177335.1|ADFP01000129.1 Genbank CDS 29312 30598 . + 0 ID=cds-EFB89537.1;Parent=gene-HMPREF7215_0030;Dbxref=NCBI_GP:EFB89537.1;Name=EFB89537.1;Note=identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184;gbkey=CDS;gene=purA;locus_tag=HMPREF7215_0030;product=adenylosuccinate synthase;protein_id=EFB89537.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 30676 31203 . - . ID=gene-HMPREF7215_0031;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0031 GCA_000177335.1|ADFP01000129.1 Genbank CDS 30676 31203 . - 0 ID=cds-EFB89538.1;Parent=gene-HMPREF7215_0031;Dbxref=NCBI_GP:EFB89538.1;Name=EFB89538.1;Note=identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE;locus_tag=HMPREF7215_0031;product=phosphoribosylaminoimidazole carboxylase%2C catalytic subunit;protein_id=EFB89538.1;transl_table=11 GCA_000177335.1|ADFP01000129.1 Genbank gene 31200 32244 . - . ID=gene-HMPREF7215_0032;Name=purD;end_range=32244,.;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0032;partial=true GCA_000177335.1|ADFP01000129.1 Genbank CDS 31200 32244 . - 1 ID=cds-EFB89539.1;Parent=gene-HMPREF7215_0032;Dbxref=NCBI_GP:EFB89539.1;Name=EFB89539.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02843%3B match to protein family HMM PF08442%3B match to protein family HMM TIGR00877;end_range=32244,.;gbkey=CDS;gene=purD;locus_tag=HMPREF7215_0032;partial=true;product=phosphoribosylamine--glycine ligase;protein_id=EFB89539.1;transl_table=11 ##sequence-region ADFP01000128.1 1 33453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000128.1 Genbank region 1 33453 . + . ID=ADFP01000128.1:1..33453;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000128.1 Genbank gene 1 4952 . - . ID=gene-HMPREF7215_1983;Name=HMPREF7215_1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1983;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000128.1 Genbank CDS 1 4952 . - 0 ID=cds-EFB89540.1;Parent=gene-HMPREF7215_1983;Dbxref=NCBI_GP:EFB89540.1;Name=EFB89540.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF7215_1983;partial=true;product=Hep/Hag repeat protein;protein_id=EFB89540.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 5395 6951 . - . ID=gene-HMPREF7215_1984;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1984 GCA_000177335.1|ADFP01000128.1 Genbank CDS 5395 6951 . - 0 ID=cds-EFB89541.1;Parent=gene-HMPREF7215_1984;Dbxref=NCBI_GP:EFB89541.1;Name=EFB89541.1;Note=identified by match to protein family HMM PF04223%3B match to protein family HMM TIGR01584;gbkey=CDS;gene=citF;locus_tag=HMPREF7215_1984;product=citrate lyase%2C alpha subunit;protein_id=EFB89541.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 6953 7864 . - . ID=gene-HMPREF7215_1985;Name=HMPREF7215_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1985 GCA_000177335.1|ADFP01000128.1 Genbank CDS 6953 7864 . - 0 ID=cds-EFB89542.1;Parent=gene-HMPREF7215_1985;Dbxref=NCBI_GP:EFB89542.1;Name=EFB89542.1;Note=identified by match to protein family HMM PF03328;gbkey=CDS;locus_tag=HMPREF7215_1985;product=putative citrate (pro-3S)-lyase%2C beta subunit;protein_id=EFB89542.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 7861 8166 . - . ID=gene-HMPREF7215_1986;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1986 GCA_000177335.1|ADFP01000128.1 Genbank CDS 7861 8166 . - 0 ID=cds-EFB89543.1;Parent=gene-HMPREF7215_1986;Dbxref=NCBI_GP:EFB89543.1;Name=EFB89543.1;Note=identified by match to protein family HMM PF04953%3B match to protein family HMM TIGR01608;gbkey=CDS;gene=citD;locus_tag=HMPREF7215_1986;product=citrate lyase acyl carrier protein;protein_id=EFB89543.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 8250 9761 . - . ID=gene-HMPREF7215_1987;Name=HMPREF7215_1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1987 GCA_000177335.1|ADFP01000128.1 Genbank CDS 8250 9761 . - 0 ID=cds-EFB89544.1;Parent=gene-HMPREF7215_1987;Dbxref=NCBI_GP:EFB89544.1;Name=EFB89544.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_1987;product=membrane protein;protein_id=EFB89544.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 9774 10316 . - . ID=gene-HMPREF7215_1988;Name=HMPREF7215_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1988 GCA_000177335.1|ADFP01000128.1 Genbank CDS 9774 10316 . - 0 ID=cds-EFB89545.1;Parent=gene-HMPREF7215_1988;Dbxref=NCBI_GP:EFB89545.1;Name=EFB89545.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1988;product=hypothetical protein;protein_id=EFB89545.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 10436 11428 . - . ID=gene-HMPREF7215_1989;Name=HMPREF7215_1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1989 GCA_000177335.1|ADFP01000128.1 Genbank CDS 10436 11428 . - 0 ID=cds-EFB89546.1;Parent=gene-HMPREF7215_1989;Dbxref=NCBI_GP:EFB89546.1;Name=EFB89546.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_1989;product=hypothetical protein;protein_id=EFB89546.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 11589 12500 . + . ID=gene-HMPREF7215_1990;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=HMPREF7215_1990 GCA_000177335.1|ADFP01000128.1 Genbank CDS 11589 12500 . + 0 ID=cds-EFB89547.1;Parent=gene-HMPREF7215_1990;Dbxref=NCBI_GP:EFB89547.1;Name=EFB89547.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;gene=cynR;locus_tag=HMPREF7215_1990;product=cyn operon transcriptional activator CynR;protein_id=EFB89547.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 12639 13532 . - . ID=gene-HMPREF7215_1991;Name=HMPREF7215_1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1991 GCA_000177335.1|ADFP01000128.1 Genbank CDS 12639 13532 . - 0 ID=cds-EFB89548.1;Parent=gene-HMPREF7215_1991;Dbxref=NCBI_GP:EFB89548.1;Name=EFB89548.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;locus_tag=HMPREF7215_1991;product=NLPA lipoprotein;protein_id=EFB89548.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 13592 14014 . - . ID=gene-HMPREF7215_1992;Name=HMPREF7215_1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1992 GCA_000177335.1|ADFP01000128.1 Genbank CDS 13592 14014 . - 0 ID=cds-EFB89549.1;Parent=gene-HMPREF7215_1992;Dbxref=NCBI_GP:EFB89549.1;Name=EFB89549.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1992;product=ABC transporter%2C permease family protein;protein_id=EFB89549.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 14290 15390 . - . ID=gene-HMPREF7215_1993;Name=HMPREF7215_1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1993 GCA_000177335.1|ADFP01000128.1 Genbank CDS 14290 15390 . - 0 ID=cds-EFB89550.1;Parent=gene-HMPREF7215_1993;Dbxref=NCBI_GP:EFB89550.1;Name=EFB89550.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;locus_tag=HMPREF7215_1993;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89550.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 15688 16170 . - . ID=gene-HMPREF7215_1994;Name=HMPREF7215_1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1994 GCA_000177335.1|ADFP01000128.1 Genbank CDS 15688 16170 . - 0 ID=cds-EFB89551.1;Parent=gene-HMPREF7215_1994;Dbxref=NCBI_GP:EFB89551.1;Name=EFB89551.1;gbkey=CDS;locus_tag=HMPREF7215_1994;product=hypothetical protein;protein_id=EFB89551.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 16276 17247 . - . ID=gene-HMPREF7215_1995;Name=HMPREF7215_1995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1995 GCA_000177335.1|ADFP01000128.1 Genbank CDS 16276 17247 . - 0 ID=cds-EFB89552.1;Parent=gene-HMPREF7215_1995;Dbxref=NCBI_GP:EFB89552.1;Name=EFB89552.1;gbkey=CDS;locus_tag=HMPREF7215_1995;product=hypothetical protein;protein_id=EFB89552.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 17540 18430 . - . ID=gene-HMPREF7215_1996;Name=HMPREF7215_1996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1996 GCA_000177335.1|ADFP01000128.1 Genbank CDS 17540 18430 . - 0 ID=cds-EFB89553.1;Parent=gene-HMPREF7215_1996;Dbxref=NCBI_GP:EFB89553.1;Name=EFB89553.1;Note=identified by match to protein family HMM PF03069;gbkey=CDS;locus_tag=HMPREF7215_1996;product=Acetamidase/Formamidase family protein;protein_id=EFB89553.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 18445 19659 . - . ID=gene-HMPREF7215_1997;Name=HMPREF7215_1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1997 GCA_000177335.1|ADFP01000128.1 Genbank CDS 18445 19659 . - 0 ID=cds-EFB89554.1;Parent=gene-HMPREF7215_1997;Dbxref=NCBI_GP:EFB89554.1;Name=EFB89554.1;Note=identified by match to protein family HMM PF01490%3B match to protein family HMM PF03222;gbkey=CDS;locus_tag=HMPREF7215_1997;product=transmembrane amino acid transporter protein;protein_id=EFB89554.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 19946 21250 . - . ID=gene-HMPREF7215_1998;Name=HMPREF7215_1998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1998 GCA_000177335.1|ADFP01000128.1 Genbank CDS 19946 21250 . - 0 ID=cds-EFB89555.1;Parent=gene-HMPREF7215_1998;Dbxref=NCBI_GP:EFB89555.1;Name=EFB89555.1;Note=identified by match to protein family HMM PF02646;gbkey=CDS;locus_tag=HMPREF7215_1998;product=RmuC domain protein;protein_id=EFB89555.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 21288 21464 . - . ID=gene-HMPREF7215_1999;Name=HMPREF7215_1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1999 GCA_000177335.1|ADFP01000128.1 Genbank CDS 21288 21464 . - 0 ID=cds-EFB89556.1;Parent=gene-HMPREF7215_1999;Dbxref=NCBI_GP:EFB89556.1;Name=EFB89556.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1999;product=hypothetical protein;protein_id=EFB89556.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 21495 22373 . - . ID=gene-HMPREF7215_2000;Name=HMPREF7215_2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2000 GCA_000177335.1|ADFP01000128.1 Genbank CDS 21495 22373 . - 0 ID=cds-EFB89557.1;Parent=gene-HMPREF7215_2000;Dbxref=NCBI_GP:EFB89557.1;Name=EFB89557.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_2000;product=putative membrane protein;protein_id=EFB89557.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 22589 23617 . + . ID=gene-HMPREF7215_2001;Name=HMPREF7215_2001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2001 GCA_000177335.1|ADFP01000128.1 Genbank CDS 22589 23617 . + 0 ID=cds-EFB89558.1;Parent=gene-HMPREF7215_2001;Dbxref=NCBI_GP:EFB89558.1;Name=EFB89558.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_2001;product=aminotransferase%2C class I/II;protein_id=EFB89558.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 23720 24088 . - . ID=gene-HMPREF7215_2002;Name=HMPREF7215_2002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2002 GCA_000177335.1|ADFP01000128.1 Genbank CDS 23720 24088 . - 0 ID=cds-EFB89559.1;Parent=gene-HMPREF7215_2002;Dbxref=NCBI_GP:EFB89559.1;Name=EFB89559.1;gbkey=CDS;locus_tag=HMPREF7215_2002;product=hypothetical protein;protein_id=EFB89559.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 24104 24457 . - . ID=gene-HMPREF7215_2003;Name=HMPREF7215_2003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2003 GCA_000177335.1|ADFP01000128.1 Genbank CDS 24104 24457 . - 0 ID=cds-EFB89560.1;Parent=gene-HMPREF7215_2003;Dbxref=NCBI_GP:EFB89560.1;Name=EFB89560.1;Note=identified by match to protein family HMM PF03819;gbkey=CDS;locus_tag=HMPREF7215_2003;product=MazG nucleotide pyrophosphohydrolase domain protein;protein_id=EFB89560.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 24600 24746 . - . ID=gene-HMPREF7215_2004;Name=HMPREF7215_2004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2004 GCA_000177335.1|ADFP01000128.1 Genbank CDS 24600 24746 . - 0 ID=cds-EFB89561.1;Parent=gene-HMPREF7215_2004;Dbxref=NCBI_GP:EFB89561.1;Name=EFB89561.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2004;product=hypothetical protein;protein_id=EFB89561.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 25100 26380 . - . ID=gene-HMPREF7215_2005;Name=HMPREF7215_2005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2005 GCA_000177335.1|ADFP01000128.1 Genbank CDS 25100 26380 . - 0 ID=cds-EFB89562.1;Parent=gene-HMPREF7215_2005;Dbxref=NCBI_GP:EFB89562.1;Name=EFB89562.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_2005;product=TRAP transporter%2C DctM subunit;protein_id=EFB89562.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 26381 26875 . - . ID=gene-HMPREF7215_2006;Name=HMPREF7215_2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2006 GCA_000177335.1|ADFP01000128.1 Genbank CDS 26381 26875 . - 0 ID=cds-EFB89563.1;Parent=gene-HMPREF7215_2006;Dbxref=NCBI_GP:EFB89563.1;Name=EFB89563.1;gbkey=CDS;locus_tag=HMPREF7215_2006;product=hypothetical protein;protein_id=EFB89563.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 26970 27962 . - . ID=gene-HMPREF7215_2007;Name=HMPREF7215_2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2007 GCA_000177335.1|ADFP01000128.1 Genbank CDS 26970 27962 . - 0 ID=cds-EFB89564.1;Parent=gene-HMPREF7215_2007;Dbxref=NCBI_GP:EFB89564.1;Name=EFB89564.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;locus_tag=HMPREF7215_2007;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB89564.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 28041 28868 . - . ID=gene-HMPREF7215_2008;Name=HMPREF7215_2008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2008 GCA_000177335.1|ADFP01000128.1 Genbank CDS 28041 28868 . - 0 ID=cds-EFB89565.1;Parent=gene-HMPREF7215_2008;Dbxref=NCBI_GP:EFB89565.1;Name=EFB89565.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=HMPREF7215_2008;product=hydrolase%2C carbon-nitrogen family;protein_id=EFB89565.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 28887 29564 . - . ID=gene-HMPREF7215_2009;Name=HMPREF7215_2009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2009 GCA_000177335.1|ADFP01000128.1 Genbank CDS 28887 29564 . - 0 ID=cds-EFB89566.1;Parent=gene-HMPREF7215_2009;Dbxref=NCBI_GP:EFB89566.1;Name=EFB89566.1;Note=identified by match to protein family HMM PF03737;gbkey=CDS;locus_tag=HMPREF7215_2009;product=demethylmenaquinone methyltransferase;protein_id=EFB89566.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 29788 30540 . - . ID=gene-HMPREF7215_2010;Name=HMPREF7215_2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2010 GCA_000177335.1|ADFP01000128.1 Genbank CDS 29788 30540 . - 0 ID=cds-EFB89567.1;Parent=gene-HMPREF7215_2010;Dbxref=NCBI_GP:EFB89567.1;Name=EFB89567.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_2010;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB89567.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 30587 30760 . + . ID=gene-HMPREF7215_2012;Name=HMPREF7215_2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2012 GCA_000177335.1|ADFP01000128.1 Genbank CDS 30587 30760 . + 0 ID=cds-EFB89568.1;Parent=gene-HMPREF7215_2012;Dbxref=NCBI_GP:EFB89568.1;Name=EFB89568.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2012;product=hypothetical protein;protein_id=EFB89568.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 30757 32133 . - . ID=gene-HMPREF7215_2011;Name=HMPREF7215_2011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2011 GCA_000177335.1|ADFP01000128.1 Genbank CDS 30757 32133 . - 0 ID=cds-EFB89569.1;Parent=gene-HMPREF7215_2011;Dbxref=NCBI_GP:EFB89569.1;Name=EFB89569.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;locus_tag=HMPREF7215_2011;product=transcriptional regulator%2C GntR family;protein_id=EFB89569.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 32139 32339 . - . ID=gene-HMPREF7215_2013;Name=HMPREF7215_2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2013 GCA_000177335.1|ADFP01000128.1 Genbank CDS 32139 32339 . - 0 ID=cds-EFB89570.1;Parent=gene-HMPREF7215_2013;Dbxref=NCBI_GP:EFB89570.1;Name=EFB89570.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2013;product=hypothetical protein;protein_id=EFB89570.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 32467 32763 . + . ID=gene-HMPREF7215_2014;Name=HMPREF7215_2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2014 GCA_000177335.1|ADFP01000128.1 Genbank CDS 32467 32763 . + 0 ID=cds-EFB89571.1;Parent=gene-HMPREF7215_2014;Dbxref=NCBI_GP:EFB89571.1;Name=EFB89571.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2014;product=hypothetical protein;protein_id=EFB89571.1;transl_table=11 GCA_000177335.1|ADFP01000128.1 Genbank gene 32837 33453 . + . ID=gene-HMPREF7215_2015;Name=HMPREF7215_2015;end_range=33453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2015;partial=true GCA_000177335.1|ADFP01000128.1 Genbank CDS 32837 33453 . + 0 ID=cds-EFB89572.1;Parent=gene-HMPREF7215_2015;Dbxref=NCBI_GP:EFB89572.1;Name=EFB89572.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=33453,.;gbkey=CDS;locus_tag=HMPREF7215_2015;partial=true;product=putative high-affinity zinc transporter periplasmic component;protein_id=EFB89572.1;transl_table=11 ##sequence-region ADFP01000127.1 1 14087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000127.1 Genbank region 1 14087 . + . ID=ADFP01000127.1:1..14087;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000127.1 Genbank gene 1 2539 . + . ID=gene-HMPREF7215_0267;Name=HMPREF7215_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0267;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000127.1 Genbank CDS 1 2539 . + 1 ID=cds-EFB89573.1;Parent=gene-HMPREF7215_0267;Dbxref=NCBI_GP:EFB89573.1;Name=EFB89573.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF7215_0267;partial=true;product=hemagglutinin;protein_id=EFB89573.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 2657 5266 . - . ID=gene-HMPREF7215_0268;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0268 GCA_000177335.1|ADFP01000127.1 Genbank CDS 2657 5266 . - 0 ID=cds-EFB89574.1;Parent=gene-HMPREF7215_0268;Dbxref=NCBI_GP:EFB89574.1;Name=EFB89574.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346;gbkey=CDS;gene=clpB;locus_tag=HMPREF7215_0268;product=ATP-dependent chaperone protein ClpB;protein_id=EFB89574.1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 5473 6789 . + . ID=gene-HMPREF7215_0269;Name=HMPREF7215_0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0269 GCA_000177335.1|ADFP01000127.1 Genbank CDS 5473 6789 . + 0 ID=cds-EFB89575.1;Parent=gene-HMPREF7215_0269;Dbxref=NCBI_GP:EFB89575.1;Name=EFB89575.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;locus_tag=HMPREF7215_0269;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EFB89575.1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 6797 8227 . + . ID=gene-HMPREF7215_0270;Name=HMPREF7215_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0270 GCA_000177335.1|ADFP01000127.1 Genbank CDS 6797 8227 . + 0 ID=cds-EFB89576.1;Parent=gene-HMPREF7215_0270;Dbxref=NCBI_GP:EFB89576.1;Name=EFB89576.1;Note=identified by match to protein family HMM PF04326;gbkey=CDS;locus_tag=HMPREF7215_0270;product=divergent AAA domain protein;protein_id=EFB89576.1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 8474 9562 . - . ID=gene-HMPREF7215_0271;Name=HMPREF7215_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0271 GCA_000177335.1|ADFP01000127.1 Genbank CDS 8474 9562 . - 0 ID=cds-EFB89577.1;Parent=gene-HMPREF7215_0271;Dbxref=NCBI_GP:EFB89577.1;Name=EFB89577.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF7215_0271;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFB89577.1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 9559 10851 . - . ID=gene-HMPREF7215_0272;Name=HMPREF7215_0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0272 GCA_000177335.1|ADFP01000127.1 Genbank CDS 9559 10851 . - 0 ID=cds-EFB89578.1;Parent=gene-HMPREF7215_0272;Dbxref=NCBI_GP:EFB89578.1;Name=EFB89578.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF7215_0272;product=type I secretion outer membrane protein%2C TolC family;protein_id=EFB89578.1;transl_table=11 GCA_000177335.1|ADFP01000127.1 Genbank gene 10853 13957 . - . ID=gene-HMPREF7215_0273;Name=HMPREF7215_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0273 GCA_000177335.1|ADFP01000127.1 Genbank CDS 10853 13957 . - 0 ID=cds-EFB89579.1;Parent=gene-HMPREF7215_0273;Dbxref=NCBI_GP:EFB89579.1;Name=EFB89579.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00873;gbkey=CDS;locus_tag=HMPREF7215_0273;product=RND transporter%2C HAE1 family;protein_id=EFB89579.1;transl_table=11 ##sequence-region ADFP01000126.1 1 19110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000126.1 Genbank region 1 19110 . + . ID=ADFP01000126.1:1..19110;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000126.1 Genbank gene 1 229 . + . ID=gene-HMPREF7215_1117;Name=HMPREF7215_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1117;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000126.1 Genbank CDS 1 229 . + 1 ID=cds-EFB89580.1;Parent=gene-HMPREF7215_1117;Dbxref=NCBI_GP:EFB89580.1;Name=EFB89580.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1117;partial=true;product=hypothetical protein;protein_id=EFB89580.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 337 1647 . + . ID=gene-HMPREF7215_1118;Name=HMPREF7215_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1118 GCA_000177335.1|ADFP01000126.1 Genbank CDS 337 1647 . + 0 ID=cds-EFB89581.1;Parent=gene-HMPREF7215_1118;Dbxref=NCBI_GP:EFB89581.1;Name=EFB89581.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR03320%3B match to protein family HMM TIGR03526;gbkey=CDS;locus_tag=HMPREF7215_1118;product=putative selenium metabolism hydrolase;protein_id=EFB89581.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 1765 3183 . + . ID=gene-HMPREF7215_1119;Name=HMPREF7215_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1119 GCA_000177335.1|ADFP01000126.1 Genbank CDS 1765 3183 . + 0 ID=cds-EFB89582.1;Parent=gene-HMPREF7215_1119;Dbxref=NCBI_GP:EFB89582.1;Name=EFB89582.1;Note=identified by match to protein family HMM PF03606%3B match to protein family HMM PF03806;gbkey=CDS;locus_tag=HMPREF7215_1119;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB89582.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 3184 4380 . + . ID=gene-HMPREF7215_1120;Name=HMPREF7215_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1120 GCA_000177335.1|ADFP01000126.1 Genbank CDS 3184 4380 . + 0 ID=cds-EFB89583.1;Parent=gene-HMPREF7215_1120;Dbxref=NCBI_GP:EFB89583.1;Name=EFB89583.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1120;product=peptidase;protein_id=EFB89583.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 4396 4521 . + . ID=gene-HMPREF7215_1121;Name=HMPREF7215_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1121 GCA_000177335.1|ADFP01000126.1 Genbank CDS 4396 4521 . + 0 ID=cds-EFB89584.1;Parent=gene-HMPREF7215_1121;Dbxref=NCBI_GP:EFB89584.1;Name=EFB89584.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1121;product=hypothetical protein;protein_id=EFB89584.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 4534 5619 . + . ID=gene-HMPREF7215_1122;Name=HMPREF7215_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1122 GCA_000177335.1|ADFP01000126.1 Genbank CDS 4534 5619 . + 0 ID=cds-EFB89585.1;Parent=gene-HMPREF7215_1122;Dbxref=NCBI_GP:EFB89585.1;Name=EFB89585.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;locus_tag=HMPREF7215_1122;product=bacterial extracellular solute-binding protein%2C family 7;protein_id=EFB89585.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 5701 6216 . + . ID=gene-HMPREF7215_1123;Name=HMPREF7215_1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1123 GCA_000177335.1|ADFP01000126.1 Genbank CDS 5701 6216 . + 0 ID=cds-EFB89586.1;Parent=gene-HMPREF7215_1123;Dbxref=NCBI_GP:EFB89586.1;Name=EFB89586.1;gbkey=CDS;locus_tag=HMPREF7215_1123;product=hypothetical protein;protein_id=EFB89586.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 6216 7550 . + . ID=gene-HMPREF7215_1124;Name=HMPREF7215_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1124 GCA_000177335.1|ADFP01000126.1 Genbank CDS 6216 7550 . + 0 ID=cds-EFB89587.1;Parent=gene-HMPREF7215_1124;Dbxref=NCBI_GP:EFB89587.1;Name=EFB89587.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_1124;product=TRAP transporter%2C DctM subunit;protein_id=EFB89587.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 7619 9208 . + . ID=gene-HMPREF7215_1125;Name=HMPREF7215_1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1125 GCA_000177335.1|ADFP01000126.1 Genbank CDS 7619 9208 . + 0 ID=cds-EFB89588.1;Parent=gene-HMPREF7215_1125;Dbxref=NCBI_GP:EFB89588.1;Name=EFB89588.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07908%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1125;product=amidohydrolase family protein;protein_id=EFB89588.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 9305 10657 . + . ID=gene-HMPREF7215_1126;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF7215_1126 GCA_000177335.1|ADFP01000126.1 Genbank CDS 9305 10657 . + 0 ID=cds-EFB89589.1;Parent=gene-HMPREF7215_1126;Dbxref=NCBI_GP:EFB89589.1;Name=EFB89589.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF7215_1126;product=amino acid carrier protein;protein_id=EFB89589.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 10723 11904 . + . ID=gene-HMPREF7215_1127;Name=HMPREF7215_1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1127 GCA_000177335.1|ADFP01000126.1 Genbank CDS 10723 11904 . + 0 ID=cds-EFB89590.1;Parent=gene-HMPREF7215_1127;Dbxref=NCBI_GP:EFB89590.1;Name=EFB89590.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1127;product=peptidase;protein_id=EFB89590.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 11914 13143 . + . ID=gene-HMPREF7215_1128;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1128 GCA_000177335.1|ADFP01000126.1 Genbank CDS 11914 13143 . + 0 ID=cds-EFB89591.1;Parent=gene-HMPREF7215_1128;Dbxref=NCBI_GP:EFB89591.1;Name=EFB89591.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;gene=thrC;locus_tag=HMPREF7215_1128;product=threonine synthase;protein_id=EFB89591.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 13231 14706 . + . ID=gene-HMPREF7215_1129;Name=HMPREF7215_1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1129 GCA_000177335.1|ADFP01000126.1 Genbank CDS 13231 14706 . + 0 ID=cds-EFB89592.1;Parent=gene-HMPREF7215_1129;Dbxref=NCBI_GP:EFB89592.1;Name=EFB89592.1;Note=identified by match to protein family HMM PF00291;gbkey=CDS;locus_tag=HMPREF7215_1129;product=pyridoxal-phosphate dependent protein;protein_id=EFB89592.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 14735 14902 . + . ID=gene-HMPREF7215_1130;Name=HMPREF7215_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1130 GCA_000177335.1|ADFP01000126.1 Genbank CDS 14735 14902 . + 0 ID=cds-EFB89593.1;Parent=gene-HMPREF7215_1130;Dbxref=NCBI_GP:EFB89593.1;Name=EFB89593.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1130;product=hypothetical protein;protein_id=EFB89593.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 14988 15653 . + . ID=gene-HMPREF7215_1131;Name=HMPREF7215_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1131 GCA_000177335.1|ADFP01000126.1 Genbank CDS 14988 15653 . + 0 ID=cds-EFB89594.1;Parent=gene-HMPREF7215_1131;Dbxref=NCBI_GP:EFB89594.1;Name=EFB89594.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1131;product=transcriptional regulator%2C GntR family;protein_id=EFB89594.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 15760 17436 . + . ID=gene-HMPREF7215_1132;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=HMPREF7215_1132 GCA_000177335.1|ADFP01000126.1 Genbank CDS 15760 17436 . + 0 ID=cds-EFB89595.1;Parent=gene-HMPREF7215_1132;Dbxref=NCBI_GP:EFB89595.1;Name=EFB89595.1;Note=identified by match to protein family HMM PF01268;gbkey=CDS;gene=fhs;locus_tag=HMPREF7215_1132;product=formate--tetrahydrofolate ligase;protein_id=EFB89595.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 17609 18241 . + . ID=gene-HMPREF7215_1133;Name=HMPREF7215_1133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1133 GCA_000177335.1|ADFP01000126.1 Genbank CDS 17609 18241 . + 0 ID=cds-EFB89596.1;Parent=gene-HMPREF7215_1133;Dbxref=NCBI_GP:EFB89596.1;Name=EFB89596.1;Note=identified by match to protein family HMM PF04961;gbkey=CDS;locus_tag=HMPREF7215_1133;product=Formiminotransferase-cyclodeaminase;protein_id=EFB89596.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 18351 18470 . + . ID=gene-HMPREF7215_1134;Name=HMPREF7215_1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1134 GCA_000177335.1|ADFP01000126.1 Genbank CDS 18351 18470 . + 0 ID=cds-EFB89597.1;Parent=gene-HMPREF7215_1134;Dbxref=NCBI_GP:EFB89597.1;Name=EFB89597.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1134;product=hypothetical protein;protein_id=EFB89597.1;transl_table=11 GCA_000177335.1|ADFP01000126.1 Genbank gene 18467 19110 . + . ID=gene-HMPREF7215_1135;Name=folD;end_range=19110,.;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1135;partial=true GCA_000177335.1|ADFP01000126.1 Genbank CDS 18467 19110 . + 0 ID=cds-EFB89598.1;Parent=gene-HMPREF7215_1135;Dbxref=NCBI_GP:EFB89598.1;Name=EFB89598.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882;end_range=19110,.;gbkey=CDS;gene=folD;locus_tag=HMPREF7215_1135;partial=true;product=tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain protein;protein_id=EFB89598.1;transl_table=11 ##sequence-region ADFP01000125.1 1 2013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000125.1 Genbank region 1 2013 . + . ID=ADFP01000125.1:1..2013;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000125.1 Genbank gene 78 392 . - . ID=gene-HMPREF7215_0587;Name=HMPREF7215_0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0587 GCA_000177335.1|ADFP01000125.1 Genbank CDS 78 392 . - 0 ID=cds-EFB89599.1;Parent=gene-HMPREF7215_0587;Dbxref=NCBI_GP:EFB89599.1;Name=EFB89599.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0587;product=hypothetical protein;protein_id=EFB89599.1;transl_table=11 GCA_000177335.1|ADFP01000125.1 Genbank gene 910 1200 . - . ID=gene-HMPREF7215_0588;Name=HMPREF7215_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0588 GCA_000177335.1|ADFP01000125.1 Genbank CDS 910 1200 . - 0 ID=cds-EFB89600.1;Parent=gene-HMPREF7215_0588;Dbxref=NCBI_GP:EFB89600.1;Name=EFB89600.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0588;product=hypothetical protein;protein_id=EFB89600.1;transl_table=11 GCA_000177335.1|ADFP01000125.1 Genbank gene 1197 1541 . - . ID=gene-HMPREF7215_0589;Name=HMPREF7215_0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0589 GCA_000177335.1|ADFP01000125.1 Genbank CDS 1197 1541 . - 0 ID=cds-EFB89601.1;Parent=gene-HMPREF7215_0589;Dbxref=NCBI_GP:EFB89601.1;Name=EFB89601.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0589;product=hypothetical protein;protein_id=EFB89601.1;transl_table=11 GCA_000177335.1|ADFP01000125.1 Genbank gene 1860 2013 . + . ID=gene-HMPREF7215_0590;Name=HMPREF7215_0590;end_range=2013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0590;partial=true GCA_000177335.1|ADFP01000125.1 Genbank CDS 1860 2013 . + 0 ID=cds-EFB89602.1;Parent=gene-HMPREF7215_0590;Dbxref=NCBI_GP:EFB89602.1;Name=EFB89602.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=2013,.;gbkey=CDS;locus_tag=HMPREF7215_0590;partial=true;product=hypothetical protein;protein_id=EFB89602.1;transl_table=11 ##sequence-region ADFP01000124.1 1 70558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000124.1 Genbank region 1 70558 . + . ID=ADFP01000124.1:1..70558;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000124.1 Genbank gene 45 434 . - . ID=gene-HMPREF7215_0979;Name=HMPREF7215_0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0979 GCA_000177335.1|ADFP01000124.1 Genbank CDS 45 434 . - 0 ID=cds-EFB89603.1;Parent=gene-HMPREF7215_0979;Dbxref=NCBI_GP:EFB89603.1;Name=EFB89603.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01022;gbkey=CDS;locus_tag=HMPREF7215_0979;product=transcriptional regulator%2C ArsR family;protein_id=EFB89603.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 464 637 . - . ID=gene-HMPREF7215_0980;Name=HMPREF7215_0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0980 GCA_000177335.1|ADFP01000124.1 Genbank CDS 464 637 . - 0 ID=cds-EFB89604.1;Parent=gene-HMPREF7215_0980;Dbxref=NCBI_GP:EFB89604.1;Name=EFB89604.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0980;product=hypothetical protein;protein_id=EFB89604.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 636 854 . + . ID=gene-HMPREF7215_0981;Name=HMPREF7215_0981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0981 GCA_000177335.1|ADFP01000124.1 Genbank CDS 636 854 . + 0 ID=cds-EFB89605.1;Parent=gene-HMPREF7215_0981;Dbxref=NCBI_GP:EFB89605.1;Name=EFB89605.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;locus_tag=HMPREF7215_0981;product=heavy metal-associated domain protein;protein_id=EFB89605.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 1001 2884 . + . ID=gene-HMPREF7215_0982;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0982 GCA_000177335.1|ADFP01000124.1 Genbank CDS 1001 2884 . + 0 ID=cds-EFB89606.1;Parent=gene-HMPREF7215_0982;Dbxref=NCBI_GP:EFB89606.1;Name=EFB89606.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=cadA;locus_tag=HMPREF7215_0982;product=cadmium-exporting ATPase;protein_id=EFB89606.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 3359 4150 . + . ID=gene-HMPREF7215_0983;Name=HMPREF7215_0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0983 GCA_000177335.1|ADFP01000124.1 Genbank CDS 3359 4150 . + 0 ID=cds-EFB89607.1;Parent=gene-HMPREF7215_0983;Dbxref=NCBI_GP:EFB89607.1;Name=EFB89607.1;gbkey=CDS;locus_tag=HMPREF7215_0983;product=hypothetical protein;protein_id=EFB89607.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 4156 4662 . + . ID=gene-HMPREF7215_0984;Name=HMPREF7215_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0984 GCA_000177335.1|ADFP01000124.1 Genbank CDS 4156 4662 . + 0 ID=cds-EFB89608.1;Parent=gene-HMPREF7215_0984;Dbxref=NCBI_GP:EFB89608.1;Name=EFB89608.1;gbkey=CDS;locus_tag=HMPREF7215_0984;product=hypothetical protein;protein_id=EFB89608.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 4666 5274 . + . ID=gene-HMPREF7215_0985;Name=HMPREF7215_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0985 GCA_000177335.1|ADFP01000124.1 Genbank CDS 4666 5274 . + 0 ID=cds-EFB89609.1;Parent=gene-HMPREF7215_0985;Dbxref=NCBI_GP:EFB89609.1;Name=EFB89609.1;Note=identified by match to protein family HMM PF01891;gbkey=CDS;locus_tag=HMPREF7215_0985;product=cobalamin biosynthesis protein CbiM;protein_id=EFB89609.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 5291 6067 . + . ID=gene-HMPREF7215_0986;Name=HMPREF7215_0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0986 GCA_000177335.1|ADFP01000124.1 Genbank CDS 5291 6067 . + 0 ID=cds-EFB89610.1;Parent=gene-HMPREF7215_0986;Dbxref=NCBI_GP:EFB89610.1;Name=EFB89610.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF7215_0986;product=cobalt transport protein;protein_id=EFB89610.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 6064 6807 . + . ID=gene-HMPREF7215_0987;Name=HMPREF7215_0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0987 GCA_000177335.1|ADFP01000124.1 Genbank CDS 6064 6807 . + 0 ID=cds-EFB89611.1;Parent=gene-HMPREF7215_0987;Dbxref=NCBI_GP:EFB89611.1;Name=EFB89611.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0987;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89611.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 6909 7658 . - . ID=gene-HMPREF7215_0988;Name=HMPREF7215_0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0988 GCA_000177335.1|ADFP01000124.1 Genbank CDS 6909 7658 . - 0 ID=cds-EFB89612.1;Parent=gene-HMPREF7215_0988;Dbxref=NCBI_GP:EFB89612.1;Name=EFB89612.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_0988;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB89612.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 7959 8177 . - . ID=gene-HMPREF7215_0989;Name=HMPREF7215_0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0989 GCA_000177335.1|ADFP01000124.1 Genbank CDS 7959 8177 . - 0 ID=cds-EFB89613.1;Parent=gene-HMPREF7215_0989;Dbxref=NCBI_GP:EFB89613.1;Name=EFB89613.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0989;product=hypothetical protein;protein_id=EFB89613.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 8199 9419 . + . ID=gene-HMPREF7215_0990;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0990 GCA_000177335.1|ADFP01000124.1 Genbank CDS 8199 9419 . + 0 ID=cds-EFB89614.1;Parent=gene-HMPREF7215_0990;Dbxref=NCBI_GP:EFB89614.1;Name=EFB89614.1;Note=identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032;gbkey=CDS;gene=argG;locus_tag=HMPREF7215_0990;product=argininosuccinate synthase;protein_id=EFB89614.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 9615 10373 . + . ID=gene-HMPREF7215_0991;Name=HMPREF7215_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0991 GCA_000177335.1|ADFP01000124.1 Genbank CDS 9615 10373 . + 0 ID=cds-EFB89615.1;Parent=gene-HMPREF7215_0991;Dbxref=NCBI_GP:EFB89615.1;Name=EFB89615.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_0991;product=cupin domain protein;protein_id=EFB89615.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 10628 11512 . - . ID=gene-HMPREF7215_0992;Name=HMPREF7215_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0992 GCA_000177335.1|ADFP01000124.1 Genbank CDS 10628 11512 . - 0 ID=cds-EFB89616.1;Parent=gene-HMPREF7215_0992;Dbxref=NCBI_GP:EFB89616.1;Name=EFB89616.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0992;product=hypothetical protein;protein_id=EFB89616.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 11776 12069 . + . ID=gene-HMPREF7215_0993;Name=HMPREF7215_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0993 GCA_000177335.1|ADFP01000124.1 Genbank CDS 11776 12069 . + 0 ID=cds-EFB89617.1;Parent=gene-HMPREF7215_0993;Dbxref=NCBI_GP:EFB89617.1;Name=EFB89617.1;Note=identified by match to protein family HMM PF01371%3B match to protein family HMM TIGR02531;gbkey=CDS;locus_tag=HMPREF7215_0993;product=TrpR family protein YerC/YecD;protein_id=EFB89617.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 12074 13207 . + . ID=gene-HMPREF7215_0994;Name=HMPREF7215_0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0994 GCA_000177335.1|ADFP01000124.1 Genbank CDS 12074 13207 . + 0 ID=cds-EFB89618.1;Parent=gene-HMPREF7215_0994;Dbxref=NCBI_GP:EFB89618.1;Name=EFB89618.1;Note=identified by match to protein family HMM PF00587;gbkey=CDS;locus_tag=HMPREF7215_0994;product=tRNA ligase class II core domain (G%2C H%2C P%2C S and T);protein_id=EFB89618.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 13200 13829 . + . ID=gene-HMPREF7215_0995;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0995 GCA_000177335.1|ADFP01000124.1 Genbank CDS 13200 13829 . + 0 ID=cds-EFB89619.1;Parent=gene-HMPREF7215_0995;Dbxref=NCBI_GP:EFB89619.1;Name=EFB89619.1;Note=identified by match to protein family HMM PF01634%3B match to protein family HMM TIGR00070;gbkey=CDS;gene=hisG;locus_tag=HMPREF7215_0995;product=ATP phosphoribosyltransferase;protein_id=EFB89619.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 13826 15106 . + . ID=gene-HMPREF7215_0996;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0996 GCA_000177335.1|ADFP01000124.1 Genbank CDS 13826 15106 . + 0 ID=cds-EFB89620.1;Parent=gene-HMPREF7215_0996;Dbxref=NCBI_GP:EFB89620.1;Name=EFB89620.1;Note=identified by match to protein family HMM PF00815%3B match to protein family HMM TIGR00069;gbkey=CDS;gene=hisD;locus_tag=HMPREF7215_0996;product=histidinol dehydrogenase;protein_id=EFB89620.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 15103 16164 . + . ID=gene-HMPREF7215_0997;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0997 GCA_000177335.1|ADFP01000124.1 Genbank CDS 15103 16164 . + 0 ID=cds-EFB89621.1;Parent=gene-HMPREF7215_0997;Dbxref=NCBI_GP:EFB89621.1;Name=EFB89621.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141;gbkey=CDS;gene=hisC;locus_tag=HMPREF7215_0997;product=histidinol-phosphate transaminase;protein_id=EFB89621.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 16165 16752 . + . ID=gene-HMPREF7215_0998;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0998 GCA_000177335.1|ADFP01000124.1 Genbank CDS 16165 16752 . + 0 ID=cds-EFB89622.1;Parent=gene-HMPREF7215_0998;Dbxref=NCBI_GP:EFB89622.1;Name=EFB89622.1;Note=identified by match to protein family HMM PF00475;gbkey=CDS;gene=hisB;locus_tag=HMPREF7215_0998;product=imidazoleglycerol-phosphate dehydratase;protein_id=EFB89622.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 16754 17377 . + . ID=gene-HMPREF7215_0999;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0999 GCA_000177335.1|ADFP01000124.1 Genbank CDS 16754 17377 . + 0 ID=cds-EFB89623.1;Parent=gene-HMPREF7215_0999;Dbxref=NCBI_GP:EFB89623.1;Name=EFB89623.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01855;gbkey=CDS;gene=hisH;locus_tag=HMPREF7215_0999;product=imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit;protein_id=EFB89623.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 17371 18084 . + . ID=gene-HMPREF7215_1000;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1000 GCA_000177335.1|ADFP01000124.1 Genbank CDS 17371 18084 . + 0 ID=cds-EFB89624.1;Parent=gene-HMPREF7215_1000;Dbxref=NCBI_GP:EFB89624.1;Name=EFB89624.1;Note=identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00007;gbkey=CDS;gene=hisA;locus_tag=HMPREF7215_1000;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=EFB89624.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 18081 18839 . + . ID=gene-HMPREF7215_1001;Name=HMPREF7215_1001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1001 GCA_000177335.1|ADFP01000124.1 Genbank CDS 18081 18839 . + 0 ID=cds-EFB89625.1;Parent=gene-HMPREF7215_1001;Dbxref=NCBI_GP:EFB89625.1;Name=EFB89625.1;Note=identified by match to protein family HMM PF00977;gbkey=CDS;locus_tag=HMPREF7215_1001;product=putative imidazoleglycerol phosphate synthase%2C cyclase subunit;protein_id=EFB89625.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 18859 19509 . + . ID=gene-HMPREF7215_1002;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1002 GCA_000177335.1|ADFP01000124.1 Genbank CDS 18859 19509 . + 0 ID=cds-EFB89626.1;Parent=gene-HMPREF7215_1002;Dbxref=NCBI_GP:EFB89626.1;Name=EFB89626.1;Note=identified by match to protein family HMM PF01502%3B match to protein family HMM PF01503%3B match to protein family HMM TIGR03188;gbkey=CDS;gene=hisE;locus_tag=HMPREF7215_1002;product=phosphoribosyl-ATP diphosphatase;protein_id=EFB89626.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 19506 20297 . + . ID=gene-HMPREF7215_1003;Name=HMPREF7215_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1003 GCA_000177335.1|ADFP01000124.1 Genbank CDS 19506 20297 . + 0 ID=cds-EFB89627.1;Parent=gene-HMPREF7215_1003;Dbxref=NCBI_GP:EFB89627.1;Name=EFB89627.1;Note=identified by match to protein family HMM PF02811%3B match to protein family HMM TIGR01856;gbkey=CDS;locus_tag=HMPREF7215_1003;product=histidinol phosphate phosphatase HisJ family;protein_id=EFB89627.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 20415 21299 . - . ID=gene-HMPREF7215_1004;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=HMPREF7215_1004 GCA_000177335.1|ADFP01000124.1 Genbank CDS 20415 21299 . - 0 ID=cds-EFB89628.1;Parent=gene-HMPREF7215_1004;Dbxref=NCBI_GP:EFB89628.1;Name=EFB89628.1;Note=identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577;gbkey=CDS;gene=mutM;locus_tag=HMPREF7215_1004;product=DNA-formamidopyrimidine glycosylase;protein_id=EFB89628.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 21496 23505 . + . ID=gene-HMPREF7215_1005;Name=HMPREF7215_1005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1005 GCA_000177335.1|ADFP01000124.1 Genbank CDS 21496 23505 . + 0 ID=cds-EFB89629.1;Parent=gene-HMPREF7215_1005;Dbxref=NCBI_GP:EFB89629.1;Name=EFB89629.1;Note=identified by match to protein family HMM PF06202%3B match to protein family HMM TIGR01561;gbkey=CDS;locus_tag=HMPREF7215_1005;product=putative glycogen debranching enzyme%2C archaeal type;protein_id=EFB89629.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 23506 24990 . + . ID=gene-HMPREF7215_1006;Name=HMPREF7215_1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1006 GCA_000177335.1|ADFP01000124.1 Genbank CDS 23506 24990 . + 0 ID=cds-EFB89630.1;Parent=gene-HMPREF7215_1006;Dbxref=NCBI_GP:EFB89630.1;Name=EFB89630.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=HMPREF7215_1006;product=glycosyltransferase%2C group 1 family protein;protein_id=EFB89630.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 24996 26177 . + . ID=gene-HMPREF7215_1007;Name=HMPREF7215_1007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1007 GCA_000177335.1|ADFP01000124.1 Genbank CDS 24996 26177 . + 0 ID=cds-EFB89631.1;Parent=gene-HMPREF7215_1007;Dbxref=NCBI_GP:EFB89631.1;Name=EFB89631.1;Note=identified by match to protein family HMM PF03065;gbkey=CDS;locus_tag=HMPREF7215_1007;product=glycosyl hydrolase%2C family 57;protein_id=EFB89631.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 26211 30467 . + . ID=gene-HMPREF7215_1008;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=HMPREF7215_1008 GCA_000177335.1|ADFP01000124.1 Genbank CDS 26211 30467 . + 0 ID=cds-EFB89632.1;Parent=gene-HMPREF7215_1008;Dbxref=NCBI_GP:EFB89632.1;Name=EFB89632.1;Note=identified by match to protein family HMM PF00343%3B match to protein family HMM PF05693%3B match to protein family HMM TIGR02094;gbkey=CDS;gene=glgP;locus_tag=HMPREF7215_1008;product=alpha-glucan phosphorylase;protein_id=EFB89632.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 30624 32069 . - . ID=gene-HMPREF7215_1009;Name=HMPREF7215_1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1009 GCA_000177335.1|ADFP01000124.1 Genbank CDS 30624 32069 . - 0 ID=cds-EFB89633.1;Parent=gene-HMPREF7215_1009;Dbxref=NCBI_GP:EFB89633.1;Name=EFB89633.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_1009;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB89633.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 32098 33273 . - . ID=gene-HMPREF7215_1010;Name=HMPREF7215_1010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1010 GCA_000177335.1|ADFP01000124.1 Genbank CDS 32098 33273 . - 0 ID=cds-EFB89634.1;Parent=gene-HMPREF7215_1010;Dbxref=NCBI_GP:EFB89634.1;Name=EFB89634.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_1010;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB89634.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 33568 34665 . - . ID=gene-HMPREF7215_1011;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=HMPREF7215_1011 GCA_000177335.1|ADFP01000124.1 Genbank CDS 33568 34665 . - 0 ID=cds-EFB89635.1;Parent=gene-HMPREF7215_1011;Dbxref=NCBI_GP:EFB89635.1;Name=EFB89635.1;Note=identified by match to protein family HMM PF03275%3B match to protein family HMM TIGR00031;gbkey=CDS;gene=glf;locus_tag=HMPREF7215_1011;product=UDP-galactopyranose mutase;protein_id=EFB89635.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 34688 36541 . - . ID=gene-HMPREF7215_1012;Name=HMPREF7215_1012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1012 GCA_000177335.1|ADFP01000124.1 Genbank CDS 34688 36541 . - 0 ID=cds-EFB89636.1;Parent=gene-HMPREF7215_1012;Dbxref=NCBI_GP:EFB89636.1;Name=EFB89636.1;Note=identified by match to protein family HMM PF01501;gbkey=CDS;locus_tag=HMPREF7215_1012;product=glycosyltransferase%2C family 8;protein_id=EFB89636.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 36640 37818 . - . ID=gene-HMPREF7215_1013;Name=HMPREF7215_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1013 GCA_000177335.1|ADFP01000124.1 Genbank CDS 36640 37818 . - 0 ID=cds-EFB89637.1;Parent=gene-HMPREF7215_1013;Dbxref=NCBI_GP:EFB89637.1;Name=EFB89637.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=HMPREF7215_1013;product=glycosyltransferase%2C group 1 family protein;protein_id=EFB89637.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 37854 38594 . - . ID=gene-HMPREF7215_1014;Name=HMPREF7215_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1014 GCA_000177335.1|ADFP01000124.1 Genbank CDS 37854 38594 . - 0 ID=cds-EFB89638.1;Parent=gene-HMPREF7215_1014;Dbxref=NCBI_GP:EFB89638.1;Name=EFB89638.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1014;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89638.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 38597 39373 . - . ID=gene-HMPREF7215_1015;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1015 GCA_000177335.1|ADFP01000124.1 Genbank CDS 38597 39373 . - 0 ID=cds-EFB89639.1;Parent=gene-HMPREF7215_1015;Dbxref=NCBI_GP:EFB89639.1;Name=EFB89639.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;gene=rfbA;locus_tag=HMPREF7215_1015;product=O-antigen export system permease protein RfbA;protein_id=EFB89639.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 39981 41423 . + . ID=gene-HMPREF7215_1016;Name=HMPREF7215_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1016 GCA_000177335.1|ADFP01000124.1 Genbank CDS 39981 41423 . + 0 ID=cds-EFB89640.1;Parent=gene-HMPREF7215_1016;Dbxref=NCBI_GP:EFB89640.1;Name=EFB89640.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_1016;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFB89640.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 41671 42117 . + . ID=gene-HMPREF7215_1017;Name=HMPREF7215_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1017 GCA_000177335.1|ADFP01000124.1 Genbank CDS 41671 42117 . + 0 ID=cds-EFB89641.1;Parent=gene-HMPREF7215_1017;Dbxref=NCBI_GP:EFB89641.1;Name=EFB89641.1;Note=identified by match to protein family HMM PF09021;gbkey=CDS;locus_tag=HMPREF7215_1017;product=HutP;protein_id=EFB89641.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 42221 43696 . + . ID=gene-HMPREF7215_1018;Name=HMPREF7215_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1018 GCA_000177335.1|ADFP01000124.1 Genbank CDS 42221 43696 . + 0 ID=cds-EFB89642.1;Parent=gene-HMPREF7215_1018;Dbxref=NCBI_GP:EFB89642.1;Name=EFB89642.1;Note=identified by match to protein family HMM PF02667%3B match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF7215_1018;product=putative TIGR00366 family protein;protein_id=EFB89642.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 43712 45166 . + . ID=gene-HMPREF7215_1019;Name=HMPREF7215_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1019 GCA_000177335.1|ADFP01000124.1 Genbank CDS 43712 45166 . + 0 ID=cds-EFB89643.1;Parent=gene-HMPREF7215_1019;Dbxref=NCBI_GP:EFB89643.1;Name=EFB89643.1;Note=identified by match to protein family HMM PF01425;gbkey=CDS;locus_tag=HMPREF7215_1019;product=Amidase;protein_id=EFB89643.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 45243 45440 . + . ID=gene-HMPREF7215_1021;Name=HMPREF7215_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1021 GCA_000177335.1|ADFP01000124.1 Genbank CDS 45243 45440 . + 0 ID=cds-EFB89644.1;Parent=gene-HMPREF7215_1021;Dbxref=NCBI_GP:EFB89644.1;Name=EFB89644.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1021;product=hypothetical protein;protein_id=EFB89644.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 45392 46246 . - . ID=gene-HMPREF7215_1020;Name=HMPREF7215_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1020 GCA_000177335.1|ADFP01000124.1 Genbank CDS 45392 46246 . - 0 ID=cds-EFB89645.1;Parent=gene-HMPREF7215_1020;Dbxref=NCBI_GP:EFB89645.1;Name=EFB89645.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;locus_tag=HMPREF7215_1020;product=sugar-binding domain protein;protein_id=EFB89645.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 46248 47252 . - . ID=gene-HMPREF7215_1022;Name=HMPREF7215_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1022 GCA_000177335.1|ADFP01000124.1 Genbank CDS 46248 47252 . - 0 ID=cds-EFB89646.1;Parent=gene-HMPREF7215_1022;Dbxref=NCBI_GP:EFB89646.1;Name=EFB89646.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;locus_tag=HMPREF7215_1022;product=sugar-binding domain protein;protein_id=EFB89646.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 47307 48239 . - . ID=gene-HMPREF7215_1023;Name=HMPREF7215_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1023 GCA_000177335.1|ADFP01000124.1 Genbank CDS 47307 48239 . - 0 ID=cds-EFB89647.1;Parent=gene-HMPREF7215_1023;Dbxref=NCBI_GP:EFB89647.1;Name=EFB89647.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1023;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB89647.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 48236 48970 . - . ID=gene-HMPREF7215_1024;Name=HMPREF7215_1024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1024 GCA_000177335.1|ADFP01000124.1 Genbank CDS 48236 48970 . - 0 ID=cds-EFB89648.1;Parent=gene-HMPREF7215_1024;Dbxref=NCBI_GP:EFB89648.1;Name=EFB89648.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1024;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89648.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 49085 49210 . - . ID=gene-HMPREF7215_1025;Name=HMPREF7215_1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1025 GCA_000177335.1|ADFP01000124.1 Genbank CDS 49085 49210 . - 0 ID=cds-EFB89649.1;Parent=gene-HMPREF7215_1025;Dbxref=NCBI_GP:EFB89649.1;Name=EFB89649.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1025;product=hypothetical protein;protein_id=EFB89649.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 49329 55226 . - . ID=gene-HMPREF7215_1026;Name=HMPREF7215_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1026 GCA_000177335.1|ADFP01000124.1 Genbank CDS 49329 55226 . - 0 ID=cds-EFB89650.1;Parent=gene-HMPREF7215_1026;Dbxref=NCBI_GP:EFB89650.1;Name=EFB89650.1;gbkey=CDS;locus_tag=HMPREF7215_1026;product=hypothetical protein;protein_id=EFB89650.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 55400 56314 . - . ID=gene-HMPREF7215_1027;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1027 GCA_000177335.1|ADFP01000124.1 Genbank CDS 55400 56314 . - 0 ID=cds-EFB89651.1;Parent=gene-HMPREF7215_1027;Dbxref=NCBI_GP:EFB89651.1;Name=EFB89651.1;Note=identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745;gbkey=CDS;gene=panE;locus_tag=HMPREF7215_1027;product=2-dehydropantoate 2-reductase;protein_id=EFB89651.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 56419 57582 . - . ID=gene-HMPREF7215_1028;Name=HMPREF7215_1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1028 GCA_000177335.1|ADFP01000124.1 Genbank CDS 56419 57582 . - 0 ID=cds-EFB89652.1;Parent=gene-HMPREF7215_1028;Dbxref=NCBI_GP:EFB89652.1;Name=EFB89652.1;Note=identified by match to protein family HMM PF04295;gbkey=CDS;locus_tag=HMPREF7215_1028;product=D-galactarate dehydratase/altronate hydrolase domain protein;protein_id=EFB89652.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 57579 57875 . - . ID=gene-HMPREF7215_1029;Name=HMPREF7215_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1029 GCA_000177335.1|ADFP01000124.1 Genbank CDS 57579 57875 . - 0 ID=cds-EFB89653.1;Parent=gene-HMPREF7215_1029;Dbxref=NCBI_GP:EFB89653.1;Name=EFB89653.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF08666;gbkey=CDS;locus_tag=HMPREF7215_1029;product=SAF domain protein;protein_id=EFB89653.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 57950 58924 . - . ID=gene-HMPREF7215_1030;Name=HMPREF7215_1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1030 GCA_000177335.1|ADFP01000124.1 Genbank CDS 57950 58924 . - 0 ID=cds-EFB89654.1;Parent=gene-HMPREF7215_1030;Dbxref=NCBI_GP:EFB89654.1;Name=EFB89654.1;Note=identified by match to protein family HMM PF03812;gbkey=CDS;locus_tag=HMPREF7215_1030;product=putative 2-keto-3-deoxygluconate transporter;protein_id=EFB89654.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 58974 59099 . - . ID=gene-HMPREF7215_1031;Name=HMPREF7215_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1031 GCA_000177335.1|ADFP01000124.1 Genbank CDS 58974 59099 . - 0 ID=cds-EFB89655.1;Parent=gene-HMPREF7215_1031;Dbxref=NCBI_GP:EFB89655.1;Name=EFB89655.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1031;product=hypothetical protein;protein_id=EFB89655.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 59131 60180 . - . ID=gene-HMPREF7215_1032;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1032 GCA_000177335.1|ADFP01000124.1 Genbank CDS 59131 60180 . - 0 ID=cds-EFB89656.1;Parent=gene-HMPREF7215_1032;Dbxref=NCBI_GP:EFB89656.1;Name=EFB89656.1;Note=identified by match to protein family HMM PF04166%3B match to protein family HMM TIGR00557;gbkey=CDS;gene=pdxA;locus_tag=HMPREF7215_1032;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=EFB89656.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 60302 61711 . - . ID=gene-HMPREF7215_1033;Name=HMPREF7215_1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1033 GCA_000177335.1|ADFP01000124.1 Genbank CDS 60302 61711 . - 0 ID=cds-EFB89657.1;Parent=gene-HMPREF7215_1033;Dbxref=NCBI_GP:EFB89657.1;Name=EFB89657.1;gbkey=CDS;locus_tag=HMPREF7215_1033;product=hypothetical protein;protein_id=EFB89657.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 61856 63625 . + . ID=gene-HMPREF7215_1034;Name=HMPREF7215_1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1034 GCA_000177335.1|ADFP01000124.1 Genbank CDS 61856 63625 . + 0 ID=cds-EFB89658.1;Parent=gene-HMPREF7215_1034;Dbxref=NCBI_GP:EFB89658.1;Name=EFB89658.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF06506;gbkey=CDS;locus_tag=HMPREF7215_1034;product=Sigma-54 interaction domain protein;protein_id=EFB89658.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 63939 65138 . + . ID=gene-HMPREF7215_1035;Name=HMPREF7215_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1035 GCA_000177335.1|ADFP01000124.1 Genbank CDS 63939 65138 . + 0 ID=cds-EFB89659.1;Parent=gene-HMPREF7215_1035;Dbxref=NCBI_GP:EFB89659.1;Name=EFB89659.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_1035;product=aminotransferase%2C class I/II;protein_id=EFB89659.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 65367 66542 . - . ID=gene-HMPREF7215_1036;Name=HMPREF7215_1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1036 GCA_000177335.1|ADFP01000124.1 Genbank CDS 65367 66542 . - 0 ID=cds-EFB89660.1;Parent=gene-HMPREF7215_1036;Dbxref=NCBI_GP:EFB89660.1;Name=EFB89660.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1036;product=amidohydrolase;protein_id=EFB89660.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 66630 67844 . - . ID=gene-HMPREF7215_1037;Name=HMPREF7215_1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1037 GCA_000177335.1|ADFP01000124.1 Genbank CDS 66630 67844 . - 0 ID=cds-EFB89661.1;Parent=gene-HMPREF7215_1037;Dbxref=NCBI_GP:EFB89661.1;Name=EFB89661.1;gbkey=CDS;locus_tag=HMPREF7215_1037;product=hypothetical protein;protein_id=EFB89661.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 68034 68240 . - . ID=gene-HMPREF7215_1038;Name=HMPREF7215_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1038 GCA_000177335.1|ADFP01000124.1 Genbank CDS 68034 68240 . - 0 ID=cds-EFB89662.1;Parent=gene-HMPREF7215_1038;Dbxref=NCBI_GP:EFB89662.1;Name=EFB89662.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1038;product=hypothetical protein;protein_id=EFB89662.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 68336 68554 . - . ID=gene-HMPREF7215_1039;Name=HMPREF7215_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1039 GCA_000177335.1|ADFP01000124.1 Genbank CDS 68336 68554 . - 0 ID=cds-EFB89663.1;Parent=gene-HMPREF7215_1039;Dbxref=NCBI_GP:EFB89663.1;Name=EFB89663.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01206;gbkey=CDS;locus_tag=HMPREF7215_1039;product=hypothetical protein;protein_id=EFB89663.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 68570 69592 . - . ID=gene-HMPREF7215_1040;Name=HMPREF7215_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1040 GCA_000177335.1|ADFP01000124.1 Genbank CDS 68570 69592 . - 0 ID=cds-EFB89664.1;Parent=gene-HMPREF7215_1040;Dbxref=NCBI_GP:EFB89664.1;Name=EFB89664.1;Note=identified by match to protein family HMM PF04143;gbkey=CDS;locus_tag=HMPREF7215_1040;product=YeeE/YedE family protein;protein_id=EFB89664.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 69705 69908 . - . ID=gene-HMPREF7215_1041;Name=HMPREF7215_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1041 GCA_000177335.1|ADFP01000124.1 Genbank CDS 69705 69908 . - 0 ID=cds-EFB89665.1;Parent=gene-HMPREF7215_1041;Dbxref=NCBI_GP:EFB89665.1;Name=EFB89665.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1041;product=hypothetical protein;protein_id=EFB89665.1;transl_table=11 GCA_000177335.1|ADFP01000124.1 Genbank gene 69960 70094 . - . ID=gene-HMPREF7215_1042;Name=HMPREF7215_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1042 GCA_000177335.1|ADFP01000124.1 Genbank CDS 69960 70094 . - 0 ID=cds-EFB89666.1;Parent=gene-HMPREF7215_1042;Dbxref=NCBI_GP:EFB89666.1;Name=EFB89666.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1042;product=hypothetical protein;protein_id=EFB89666.1;transl_table=11 ##sequence-region ADFP01000123.1 1 48399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000123.1 Genbank region 1 48399 . + . ID=ADFP01000123.1:1..48399;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000123.1 Genbank gene 195 323 . - . ID=gene-HMPREF7215_2402;Name=HMPREF7215_2402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2402 GCA_000177335.1|ADFP01000123.1 Genbank CDS 195 323 . - 0 ID=cds-EFB89667.1;Parent=gene-HMPREF7215_2402;Dbxref=NCBI_GP:EFB89667.1;Name=EFB89667.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2402;product=hypothetical protein;protein_id=EFB89667.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 362 2029 . - . ID=gene-HMPREF7215_2403;Name=HMPREF7215_2403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2403 GCA_000177335.1|ADFP01000123.1 Genbank CDS 362 2029 . - 0 ID=cds-EFB89668.1;Parent=gene-HMPREF7215_2403;Dbxref=NCBI_GP:EFB89668.1;Name=EFB89668.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_2403;product=peptidase%2C C69 family;protein_id=EFB89668.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 2063 3232 . - . ID=gene-HMPREF7215_2404;Name=HMPREF7215_2404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2404 GCA_000177335.1|ADFP01000123.1 Genbank CDS 2063 3232 . - 0 ID=cds-EFB89669.1;Parent=gene-HMPREF7215_2404;Dbxref=NCBI_GP:EFB89669.1;Name=EFB89669.1;gbkey=CDS;locus_tag=HMPREF7215_2404;product=hypothetical protein;protein_id=EFB89669.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 3249 3413 . - . ID=gene-HMPREF7215_2405;Name=HMPREF7215_2405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2405 GCA_000177335.1|ADFP01000123.1 Genbank CDS 3249 3413 . - 0 ID=cds-EFB89670.1;Parent=gene-HMPREF7215_2405;Dbxref=NCBI_GP:EFB89670.1;Name=EFB89670.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2405;product=hypothetical protein;protein_id=EFB89670.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 3420 4754 . - . ID=gene-HMPREF7215_2406;Name=HMPREF7215_2406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2406 GCA_000177335.1|ADFP01000123.1 Genbank CDS 3420 4754 . - 0 ID=cds-EFB89671.1;Parent=gene-HMPREF7215_2406;Dbxref=NCBI_GP:EFB89671.1;Name=EFB89671.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF03606;gbkey=CDS;locus_tag=HMPREF7215_2406;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB89671.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 4853 5413 . - . ID=gene-HMPREF7215_2407;Name=HMPREF7215_2407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2407 GCA_000177335.1|ADFP01000123.1 Genbank CDS 4853 5413 . - 0 ID=cds-EFB89672.1;Parent=gene-HMPREF7215_2407;Dbxref=NCBI_GP:EFB89672.1;Name=EFB89672.1;gbkey=CDS;locus_tag=HMPREF7215_2407;product=hypothetical protein;protein_id=EFB89672.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 5514 7115 . - . ID=gene-HMPREF7215_2408;Name=HMPREF7215_2408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2408 GCA_000177335.1|ADFP01000123.1 Genbank CDS 5514 7115 . - 0 ID=cds-EFB89673.1;Parent=gene-HMPREF7215_2408;Dbxref=NCBI_GP:EFB89673.1;Name=EFB89673.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_2408;product=peptidase%2C C69 family;protein_id=EFB89673.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 7251 8909 . - . ID=gene-HMPREF7215_2409;Name=HMPREF7215_2409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2409 GCA_000177335.1|ADFP01000123.1 Genbank CDS 7251 8909 . - 0 ID=cds-EFB89674.1;Parent=gene-HMPREF7215_2409;Dbxref=NCBI_GP:EFB89674.1;Name=EFB89674.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_2409;product=peptidase%2C C69 family;protein_id=EFB89674.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 8976 9104 . + . ID=gene-HMPREF7215_2410;Name=HMPREF7215_2410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2410 GCA_000177335.1|ADFP01000123.1 Genbank CDS 8976 9104 . + 0 ID=cds-EFB89675.1;Parent=gene-HMPREF7215_2410;Dbxref=NCBI_GP:EFB89675.1;Name=EFB89675.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2410;product=hypothetical protein;protein_id=EFB89675.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 9381 9746 . - . ID=gene-HMPREF7215_2411;Name=HMPREF7215_2411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2411 GCA_000177335.1|ADFP01000123.1 Genbank CDS 9381 9746 . - 0 ID=cds-EFB89676.1;Parent=gene-HMPREF7215_2411;Dbxref=NCBI_GP:EFB89676.1;Name=EFB89676.1;Note=identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617;gbkey=CDS;locus_tag=HMPREF7215_2411;product=transcriptional regulator%2C Spx/MgsR family;protein_id=EFB89676.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 10295 12304 . + . ID=gene-HMPREF7215_2412;Name=HMPREF7215_2412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2412 GCA_000177335.1|ADFP01000123.1 Genbank CDS 10295 12304 . + 0 ID=cds-EFB89677.1;Parent=gene-HMPREF7215_2412;Dbxref=NCBI_GP:EFB89677.1;Name=EFB89677.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF7215_2412;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB89677.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 12288 12974 . + . ID=gene-HMPREF7215_2413;Name=HMPREF7215_2413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2413 GCA_000177335.1|ADFP01000123.1 Genbank CDS 12288 12974 . + 0 ID=cds-EFB89678.1;Parent=gene-HMPREF7215_2413;Dbxref=NCBI_GP:EFB89678.1;Name=EFB89678.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;locus_tag=HMPREF7215_2413;product=response regulator receiver domain protein;protein_id=EFB89678.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 13156 14850 . - . ID=gene-HMPREF7215_2414;Name=HMPREF7215_2414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2414 GCA_000177335.1|ADFP01000123.1 Genbank CDS 13156 14850 . - 0 ID=cds-EFB89679.1;Parent=gene-HMPREF7215_2414;Dbxref=NCBI_GP:EFB89679.1;Name=EFB89679.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_2414;product=peptidase%2C C69 family;protein_id=EFB89679.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 15085 16284 . + . ID=gene-HMPREF7215_2415;Name=fprA;gbkey=Gene;gene=fprA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2415 GCA_000177335.1|ADFP01000123.1 Genbank CDS 15085 16284 . + 0 ID=cds-EFB89680.1;Parent=gene-HMPREF7215_2415;Dbxref=NCBI_GP:EFB89680.1;Name=EFB89680.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM PF00753;gbkey=CDS;gene=fprA;locus_tag=HMPREF7215_2415;product=metallo-beta-lactamase domain protein;protein_id=EFB89680.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 16541 17212 . + . ID=gene-HMPREF7215_2416;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=HMPREF7215_2416 GCA_000177335.1|ADFP01000123.1 Genbank CDS 16541 17212 . + 0 ID=cds-EFB89681.1;Parent=gene-HMPREF7215_2416;Dbxref=NCBI_GP:EFB89681.1;Name=EFB89681.1;Note=identified by match to protein family HMM PF00392;gbkey=CDS;gene=gntR;locus_tag=HMPREF7215_2416;product=gluconate operon transcriptional repressor;protein_id=EFB89681.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 17520 18818 . - . ID=gene-HMPREF7215_2417;Name=HMPREF7215_2417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2417 GCA_000177335.1|ADFP01000123.1 Genbank CDS 17520 18818 . - 0 ID=cds-EFB89682.1;Parent=gene-HMPREF7215_2417;Dbxref=NCBI_GP:EFB89682.1;Name=EFB89682.1;Note=identified by match to protein family HMM PF03390;gbkey=CDS;locus_tag=HMPREF7215_2417;product=citrate carrier protein%2C CCS family;protein_id=EFB89682.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 18781 18903 . + . ID=gene-HMPREF7215_2418;Name=HMPREF7215_2418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2418 GCA_000177335.1|ADFP01000123.1 Genbank CDS 18781 18903 . + 0 ID=cds-EFB89683.1;Parent=gene-HMPREF7215_2418;Dbxref=NCBI_GP:EFB89683.1;Name=EFB89683.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2418;product=hypothetical protein;protein_id=EFB89683.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 18919 20097 . - . ID=gene-HMPREF7215_2419;Name=HMPREF7215_2419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2419 GCA_000177335.1|ADFP01000123.1 Genbank CDS 18919 20097 . - 0 ID=cds-EFB89684.1;Parent=gene-HMPREF7215_2419;Dbxref=NCBI_GP:EFB89684.1;Name=EFB89684.1;Note=identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949;gbkey=CDS;locus_tag=HMPREF7215_2419;product=malic enzyme%2C NAD binding domain protein;protein_id=EFB89684.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 20324 20596 . + . ID=gene-HMPREF7215_2420;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2420 GCA_000177335.1|ADFP01000123.1 Genbank CDS 20324 20596 . + 0 ID=cds-EFB89685.1;Parent=gene-HMPREF7215_2420;Dbxref=NCBI_GP:EFB89685.1;Name=EFB89685.1;Note=identified by match to protein family HMM PF04953%3B match to protein family HMM TIGR01608;gbkey=CDS;gene=citD;locus_tag=HMPREF7215_2420;product=citrate lyase acyl carrier protein;protein_id=EFB89685.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 20597 21475 . + . ID=gene-HMPREF7215_2421;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2421 GCA_000177335.1|ADFP01000123.1 Genbank CDS 20597 21475 . + 0 ID=cds-EFB89686.1;Parent=gene-HMPREF7215_2421;Dbxref=NCBI_GP:EFB89686.1;Name=EFB89686.1;Note=identified by match to protein family HMM PF03328;gbkey=CDS;gene=citE;locus_tag=HMPREF7215_2421;product=citrate lyase subunit beta;protein_id=EFB89686.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 21472 22881 . + . ID=gene-HMPREF7215_2422;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2422 GCA_000177335.1|ADFP01000123.1 Genbank CDS 21472 22881 . + 0 ID=cds-EFB89687.1;Parent=gene-HMPREF7215_2422;Dbxref=NCBI_GP:EFB89687.1;Name=EFB89687.1;Note=identified by match to protein family HMM PF04223%3B match to protein family HMM TIGR01584;gbkey=CDS;gene=citF;locus_tag=HMPREF7215_2422;product=citrate lyase%2C alpha subunit;protein_id=EFB89687.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 22953 24203 . + . ID=gene-HMPREF7215_2423;Name=HMPREF7215_2423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2423 GCA_000177335.1|ADFP01000123.1 Genbank CDS 22953 24203 . + 0 ID=cds-EFB89688.1;Parent=gene-HMPREF7215_2423;Dbxref=NCBI_GP:EFB89688.1;Name=EFB89688.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02086;gbkey=CDS;locus_tag=HMPREF7215_2423;product=3-isopropylmalate dehydratase large subunit;protein_id=EFB89688.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 24218 24721 . + . ID=gene-HMPREF7215_2424;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2424 GCA_000177335.1|ADFP01000123.1 Genbank CDS 24218 24721 . + 0 ID=cds-EFB89689.1;Parent=gene-HMPREF7215_2424;Dbxref=NCBI_GP:EFB89689.1;Name=EFB89689.1;Note=identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR02087;gbkey=CDS;gene=leuD;locus_tag=HMPREF7215_2424;product=isopropylmalate/citramalate isomerase small subunit;protein_id=EFB89689.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 24786 25319 . - . ID=gene-HMPREF7215_2425;Name=HMPREF7215_2425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2425 GCA_000177335.1|ADFP01000123.1 Genbank CDS 24786 25319 . - 0 ID=cds-EFB89690.1;Parent=gene-HMPREF7215_2425;Dbxref=NCBI_GP:EFB89690.1;Name=EFB89690.1;gbkey=CDS;locus_tag=HMPREF7215_2425;product=hypothetical protein;protein_id=EFB89690.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 25397 26599 . - . ID=gene-HMPREF7215_2426;Name=HMPREF7215_2426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2426 GCA_000177335.1|ADFP01000123.1 Genbank CDS 25397 26599 . - 0 ID=cds-EFB89691.1;Parent=gene-HMPREF7215_2426;Dbxref=NCBI_GP:EFB89691.1;Name=EFB89691.1;gbkey=CDS;locus_tag=HMPREF7215_2426;product=hypothetical protein;protein_id=EFB89691.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 26598 26714 . + . ID=gene-HMPREF7215_2427;Name=HMPREF7215_2427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2427 GCA_000177335.1|ADFP01000123.1 Genbank CDS 26598 26714 . + 0 ID=cds-EFB89692.1;Parent=gene-HMPREF7215_2427;Dbxref=NCBI_GP:EFB89692.1;Name=EFB89692.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2427;product=hypothetical protein;protein_id=EFB89692.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 26800 26877 . - . ID=gene-HMPREF7215_2428;Name=HMPREF7215_2428;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2428 GCA_000177335.1|ADFP01000123.1 Genbank tRNA 26800 26877 . - . ID=rna-HMPREF7215_2428;Parent=gene-HMPREF7215_2428;gbkey=tRNA;locus_tag=HMPREF7215_2428;product=tRNA-Glu GCA_000177335.1|ADFP01000123.1 Genbank exon 26800 26877 . - . ID=exon-HMPREF7215_2428-1;Parent=rna-HMPREF7215_2428;gbkey=tRNA;locus_tag=HMPREF7215_2428;product=tRNA-Glu GCA_000177335.1|ADFP01000123.1 Genbank gene 26885 26960 . - . ID=gene-HMPREF7215_2429;Name=HMPREF7215_2429;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2429 GCA_000177335.1|ADFP01000123.1 Genbank tRNA 26885 26960 . - . ID=rna-HMPREF7215_2429;Parent=gene-HMPREF7215_2429;gbkey=tRNA;locus_tag=HMPREF7215_2429;product=tRNA-Gln GCA_000177335.1|ADFP01000123.1 Genbank exon 26885 26960 . - . ID=exon-HMPREF7215_2429-1;Parent=rna-HMPREF7215_2429;gbkey=tRNA;locus_tag=HMPREF7215_2429;product=tRNA-Gln GCA_000177335.1|ADFP01000123.1 Genbank gene 27211 28473 . + . ID=gene-HMPREF7215_2431;Name=HMPREF7215_2431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2431 GCA_000177335.1|ADFP01000123.1 Genbank CDS 27211 28473 . + 0 ID=cds-EFB89693.1;Parent=gene-HMPREF7215_2431;Dbxref=NCBI_GP:EFB89693.1;Name=EFB89693.1;gbkey=CDS;locus_tag=HMPREF7215_2431;product=ketose-bisphosphate aldolase;protein_id=EFB89693.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 28477 29397 . + . ID=gene-HMPREF7215_2432;Name=HMPREF7215_2432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2432 GCA_000177335.1|ADFP01000123.1 Genbank CDS 28477 29397 . + 0 ID=cds-EFB89694.1;Parent=gene-HMPREF7215_2432;Dbxref=NCBI_GP:EFB89694.1;Name=EFB89694.1;Note=identified by match to protein family HMM PF03968;gbkey=CDS;locus_tag=HMPREF7215_2432;product=OstA-like protein;protein_id=EFB89694.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 29394 30128 . + . ID=gene-HMPREF7215_2433;Name=HMPREF7215_2433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2433 GCA_000177335.1|ADFP01000123.1 Genbank CDS 29394 30128 . + 0 ID=cds-EFB89695.1;Parent=gene-HMPREF7215_2433;Dbxref=NCBI_GP:EFB89695.1;Name=EFB89695.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2433;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89695.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 30144 30602 . - . ID=gene-HMPREF7215_2434;Name=HMPREF7215_2434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2434 GCA_000177335.1|ADFP01000123.1 Genbank CDS 30144 30602 . - 0 ID=cds-EFB89696.1;Parent=gene-HMPREF7215_2434;Dbxref=NCBI_GP:EFB89696.1;Name=EFB89696.1;Note=identified by match to protein family HMM PF01750%3B match to protein family HMM TIGR00072;gbkey=CDS;locus_tag=HMPREF7215_2434;product=hydrogenase maturation protease;protein_id=EFB89696.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 30623 32299 . + . ID=gene-HMPREF7215_2435;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=HMPREF7215_2435 GCA_000177335.1|ADFP01000123.1 Genbank CDS 30623 32299 . + 0 ID=cds-EFB89697.1;Parent=gene-HMPREF7215_2435;Dbxref=NCBI_GP:EFB89697.1;Name=EFB89697.1;Note=identified by match to protein family HMM PF03023%3B match to protein family HMM TIGR01695;gbkey=CDS;gene=mviN;locus_tag=HMPREF7215_2435;product=integral membrane protein MviN;protein_id=EFB89697.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 32345 32890 . + . ID=gene-HMPREF7215_2436;Name=HMPREF7215_2436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2436 GCA_000177335.1|ADFP01000123.1 Genbank CDS 32345 32890 . + 0 ID=cds-EFB89698.1;Parent=gene-HMPREF7215_2436;Dbxref=NCBI_GP:EFB89698.1;Name=EFB89698.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2436;product=hypothetical protein;protein_id=EFB89698.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 32897 33073 . + . ID=gene-HMPREF7215_2437;Name=HMPREF7215_2437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2437 GCA_000177335.1|ADFP01000123.1 Genbank CDS 32897 33073 . + 0 ID=cds-EFB89699.1;Parent=gene-HMPREF7215_2437;Dbxref=NCBI_GP:EFB89699.1;Name=EFB89699.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2437;product=hypothetical protein;protein_id=EFB89699.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 33061 34104 . + . ID=gene-HMPREF7215_2438;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;locus_tag=HMPREF7215_2438 GCA_000177335.1|ADFP01000123.1 Genbank CDS 33061 34104 . + 0 ID=cds-EFB89700.1;Parent=gene-HMPREF7215_2438;Dbxref=NCBI_GP:EFB89700.1;Name=EFB89700.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723;gbkey=CDS;gene=gcp;locus_tag=HMPREF7215_2438;product=putative glycoprotease GCP;protein_id=EFB89700.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 34101 34556 . + . ID=gene-HMPREF7215_2439;Name=HMPREF7215_2439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2439 GCA_000177335.1|ADFP01000123.1 Genbank CDS 34101 34556 . + 0 ID=cds-EFB89701.1;Parent=gene-HMPREF7215_2439;Dbxref=NCBI_GP:EFB89701.1;Name=EFB89701.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;locus_tag=HMPREF7215_2439;product=prepilin-type cleavage/methylation N-terminal domain protein;protein_id=EFB89701.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 34816 35226 . - . ID=gene-HMPREF7215_2440;Name=HMPREF7215_2440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2440 GCA_000177335.1|ADFP01000123.1 Genbank CDS 34816 35226 . - 0 ID=cds-EFB89702.1;Parent=gene-HMPREF7215_2440;Dbxref=NCBI_GP:EFB89702.1;Name=EFB89702.1;gbkey=CDS;locus_tag=HMPREF7215_2440;product=hypothetical protein;protein_id=EFB89702.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 35223 36074 . - . ID=gene-HMPREF7215_2441;Name=HMPREF7215_2441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2441 GCA_000177335.1|ADFP01000123.1 Genbank CDS 35223 36074 . - 0 ID=cds-EFB89703.1;Parent=gene-HMPREF7215_2441;Dbxref=NCBI_GP:EFB89703.1;Name=EFB89703.1;Note=identified by match to protein family HMM PF00950;gbkey=CDS;locus_tag=HMPREF7215_2441;product=ABC 3 transport family protein;protein_id=EFB89703.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 36074 36787 . - . ID=gene-HMPREF7215_2442;Name=HMPREF7215_2442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2442 GCA_000177335.1|ADFP01000123.1 Genbank CDS 36074 36787 . - 0 ID=cds-EFB89704.1;Parent=gene-HMPREF7215_2442;Dbxref=NCBI_GP:EFB89704.1;Name=EFB89704.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2442;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89704.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 36803 37747 . - . ID=gene-HMPREF7215_2443;Name=HMPREF7215_2443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2443 GCA_000177335.1|ADFP01000123.1 Genbank CDS 36803 37747 . - 0 ID=cds-EFB89705.1;Parent=gene-HMPREF7215_2443;Dbxref=NCBI_GP:EFB89705.1;Name=EFB89705.1;Note=identified by match to protein family HMM PF01297;gbkey=CDS;locus_tag=HMPREF7215_2443;product=ABC transporter%2C substrate-binding protein;protein_id=EFB89705.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 37934 38563 . + . ID=gene-HMPREF7215_2444;Name=HMPREF7215_2444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2444 GCA_000177335.1|ADFP01000123.1 Genbank CDS 37934 38563 . + 0 ID=cds-EFB89706.1;Parent=gene-HMPREF7215_2444;Dbxref=NCBI_GP:EFB89706.1;Name=EFB89706.1;gbkey=CDS;locus_tag=HMPREF7215_2444;product=hypothetical protein;protein_id=EFB89706.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 38659 40029 . + . ID=gene-HMPREF7215_2445;Name=HMPREF7215_2445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2445 GCA_000177335.1|ADFP01000123.1 Genbank CDS 38659 40029 . + 0 ID=cds-EFB89707.1;Parent=gene-HMPREF7215_2445;Dbxref=NCBI_GP:EFB89707.1;Name=EFB89707.1;gbkey=CDS;locus_tag=HMPREF7215_2445;product=hypothetical protein;protein_id=EFB89707.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 40181 41977 . - . ID=gene-HMPREF7215_2446;Name=HMPREF7215_2446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2446 GCA_000177335.1|ADFP01000123.1 Genbank CDS 40181 41977 . - 0 ID=cds-EFB89708.1;Parent=gene-HMPREF7215_2446;Dbxref=NCBI_GP:EFB89708.1;Name=EFB89708.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_2446;product=peptidase%2C C69 family;protein_id=EFB89708.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 42104 43105 . - . ID=gene-HMPREF7215_2447;Name=HMPREF7215_2447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2447 GCA_000177335.1|ADFP01000123.1 Genbank CDS 42104 43105 . - 0 ID=cds-EFB89709.1;Parent=gene-HMPREF7215_2447;Dbxref=NCBI_GP:EFB89709.1;Name=EFB89709.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_2447;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89709.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 43107 44090 . - . ID=gene-HMPREF7215_2448;Name=HMPREF7215_2448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2448 GCA_000177335.1|ADFP01000123.1 Genbank CDS 43107 44090 . - 0 ID=cds-EFB89710.1;Parent=gene-HMPREF7215_2448;Dbxref=NCBI_GP:EFB89710.1;Name=EFB89710.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_2448;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89710.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 44101 45000 . - . ID=gene-HMPREF7215_2449;Name=HMPREF7215_2449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2449 GCA_000177335.1|ADFP01000123.1 Genbank CDS 44101 45000 . - 0 ID=cds-EFB89711.1;Parent=gene-HMPREF7215_2449;Dbxref=NCBI_GP:EFB89711.1;Name=EFB89711.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2449;product=ABC transporter%2C permease protein;protein_id=EFB89711.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 45015 45980 . - . ID=gene-HMPREF7215_2450;Name=HMPREF7215_2450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2450 GCA_000177335.1|ADFP01000123.1 Genbank CDS 45015 45980 . - 0 ID=cds-EFB89712.1;Parent=gene-HMPREF7215_2450;Dbxref=NCBI_GP:EFB89712.1;Name=EFB89712.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2450;product=ABC transporter%2C permease protein;protein_id=EFB89712.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 46114 47724 . - . ID=gene-HMPREF7215_2451;Name=HMPREF7215_2451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2451 GCA_000177335.1|ADFP01000123.1 Genbank CDS 46114 47724 . - 0 ID=cds-EFB89713.1;Parent=gene-HMPREF7215_2451;Dbxref=NCBI_GP:EFB89713.1;Name=EFB89713.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_2451;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB89713.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 47801 47989 . - . ID=gene-HMPREF7215_2452;Name=HMPREF7215_2452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2452 GCA_000177335.1|ADFP01000123.1 Genbank CDS 47801 47989 . - 0 ID=cds-EFB89714.1;Parent=gene-HMPREF7215_2452;Dbxref=NCBI_GP:EFB89714.1;Name=EFB89714.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2452;product=hypothetical protein;protein_id=EFB89714.1;transl_table=11 GCA_000177335.1|ADFP01000123.1 Genbank gene 48025 48399 . - . ID=gene-HMPREF7215_2453;Name=HMPREF7215_2453;end_range=48399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2453;partial=true GCA_000177335.1|ADFP01000123.1 Genbank CDS 48025 48399 . - 0 ID=cds-EFB89715.1;Parent=gene-HMPREF7215_2453;Dbxref=NCBI_GP:EFB89715.1;Name=EFB89715.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;end_range=48399,.;gbkey=CDS;locus_tag=HMPREF7215_2453;partial=true;product=hypothetical protein;protein_id=EFB89715.1;transl_table=11 ##sequence-region ADFP01000122.1 1 11530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000122.1 Genbank region 1 11530 . + . ID=ADFP01000122.1:1..11530;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000122.1 Genbank gene 110 1489 . + . ID=gene-HMPREF7215_1324;Name=HMPREF7215_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1324 GCA_000177335.1|ADFP01000122.1 Genbank CDS 110 1489 . + 0 ID=cds-EFB89716.1;Parent=gene-HMPREF7215_1324;Dbxref=NCBI_GP:EFB89716.1;Name=EFB89716.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486;gbkey=CDS;locus_tag=HMPREF7215_1324;product=FAD dependent oxidoreductase;protein_id=EFB89716.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 1531 1644 . + . ID=gene-HMPREF7215_1325;Name=HMPREF7215_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1325 GCA_000177335.1|ADFP01000122.1 Genbank CDS 1531 1644 . + 0 ID=cds-EFB89717.1;Parent=gene-HMPREF7215_1325;Dbxref=NCBI_GP:EFB89717.1;Name=EFB89717.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1325;product=hypothetical protein;protein_id=EFB89717.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 1679 2437 . + . ID=gene-HMPREF7215_1326;Name=HMPREF7215_1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1326 GCA_000177335.1|ADFP01000122.1 Genbank CDS 1679 2437 . + 0 ID=cds-EFB89718.1;Parent=gene-HMPREF7215_1326;Dbxref=NCBI_GP:EFB89718.1;Name=EFB89718.1;Note=identified by match to protein family HMM PF00293%3B match to protein family HMM PF09297;gbkey=CDS;locus_tag=HMPREF7215_1326;product=hydrolase%2C NUDIX family;protein_id=EFB89718.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 2618 2764 . - . ID=gene-HMPREF7215_1327;Name=HMPREF7215_1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1327 GCA_000177335.1|ADFP01000122.1 Genbank CDS 2618 2764 . - 0 ID=cds-EFB89719.1;Parent=gene-HMPREF7215_1327;Dbxref=NCBI_GP:EFB89719.1;Name=EFB89719.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1327;product=hypothetical protein;protein_id=EFB89719.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 2793 3917 . + . ID=gene-HMPREF7215_1328;Name=HMPREF7215_1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1328 GCA_000177335.1|ADFP01000122.1 Genbank CDS 2793 3917 . + 0 ID=cds-EFB89720.1;Parent=gene-HMPREF7215_1328;Dbxref=NCBI_GP:EFB89720.1;Name=EFB89720.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;locus_tag=HMPREF7215_1328;product=receptor family ligand-binding protein;protein_id=EFB89720.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 3921 4088 . - . ID=gene-HMPREF7215_1329;Name=HMPREF7215_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1329 GCA_000177335.1|ADFP01000122.1 Genbank CDS 3921 4088 . - 0 ID=cds-EFB89721.1;Parent=gene-HMPREF7215_1329;Dbxref=NCBI_GP:EFB89721.1;Name=EFB89721.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1329;product=hypothetical protein;protein_id=EFB89721.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 4087 4968 . + . ID=gene-HMPREF7215_1330;Name=HMPREF7215_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1330 GCA_000177335.1|ADFP01000122.1 Genbank CDS 4087 4968 . + 0 ID=cds-EFB89722.1;Parent=gene-HMPREF7215_1330;Dbxref=NCBI_GP:EFB89722.1;Name=EFB89722.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1330;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB89722.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 4971 6041 . + . ID=gene-HMPREF7215_1331;Name=HMPREF7215_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1331 GCA_000177335.1|ADFP01000122.1 Genbank CDS 4971 6041 . + 0 ID=cds-EFB89723.1;Parent=gene-HMPREF7215_1331;Dbxref=NCBI_GP:EFB89723.1;Name=EFB89723.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1331;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB89723.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 6031 6864 . + . ID=gene-HMPREF7215_1332;Name=HMPREF7215_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1332 GCA_000177335.1|ADFP01000122.1 Genbank CDS 6031 6864 . + 0 ID=cds-EFB89724.1;Parent=gene-HMPREF7215_1332;Dbxref=NCBI_GP:EFB89724.1;Name=EFB89724.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1332;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89724.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 6867 7586 . + . ID=gene-HMPREF7215_1333;Name=HMPREF7215_1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1333 GCA_000177335.1|ADFP01000122.1 Genbank CDS 6867 7586 . + 0 ID=cds-EFB89725.1;Parent=gene-HMPREF7215_1333;Dbxref=NCBI_GP:EFB89725.1;Name=EFB89725.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1333;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89725.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 7868 9700 . + . ID=gene-HMPREF7215_1334;Name=HMPREF7215_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1334 GCA_000177335.1|ADFP01000122.1 Genbank CDS 7868 9700 . + 0 ID=cds-EFB89726.1;Parent=gene-HMPREF7215_1334;Dbxref=NCBI_GP:EFB89726.1;Name=EFB89726.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_1334;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFB89726.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 9694 11427 . + . ID=gene-HMPREF7215_1336;Name=HMPREF7215_1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1336 GCA_000177335.1|ADFP01000122.1 Genbank CDS 9694 11427 . + 0 ID=cds-EFB89727.1;Parent=gene-HMPREF7215_1336;Dbxref=NCBI_GP:EFB89727.1;Name=EFB89727.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;locus_tag=HMPREF7215_1336;product=hydrogenase%2C Fe-only;protein_id=EFB89727.1;transl_table=11 GCA_000177335.1|ADFP01000122.1 Genbank gene 11385 11507 . - . ID=gene-HMPREF7215_1335;Name=HMPREF7215_1335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1335 GCA_000177335.1|ADFP01000122.1 Genbank CDS 11385 11507 . - 0 ID=cds-EFB89728.1;Parent=gene-HMPREF7215_1335;Dbxref=NCBI_GP:EFB89728.1;Name=EFB89728.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1335;product=hypothetical protein;protein_id=EFB89728.1;transl_table=11 ##sequence-region ADFP01000121.1 1 80239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000121.1 Genbank region 1 80239 . + . ID=ADFP01000121.1:1..80239;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000121.1 Genbank gene 13 459 . + . ID=gene-HMPREF7215_2543;Name=HMPREF7215_2543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2543 GCA_000177335.1|ADFP01000121.1 Genbank CDS 13 459 . + 0 ID=cds-EFB89729.1;Parent=gene-HMPREF7215_2543;Dbxref=NCBI_GP:EFB89729.1;Name=EFB89729.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2543;product=hypothetical protein;protein_id=EFB89729.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 480 626 . - . ID=gene-HMPREF7215_2544;Name=HMPREF7215_2544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2544 GCA_000177335.1|ADFP01000121.1 Genbank CDS 480 626 . - 0 ID=cds-EFB89730.1;Parent=gene-HMPREF7215_2544;Dbxref=NCBI_GP:EFB89730.1;Name=EFB89730.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2544;product=hypothetical protein;protein_id=EFB89730.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 715 1221 . + . ID=gene-HMPREF7215_2545;Name=HMPREF7215_2545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2545 GCA_000177335.1|ADFP01000121.1 Genbank CDS 715 1221 . + 0 ID=cds-EFB89731.1;Parent=gene-HMPREF7215_2545;Dbxref=NCBI_GP:EFB89731.1;Name=EFB89731.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02937;gbkey=CDS;locus_tag=HMPREF7215_2545;product=Sigma-70 region 2;protein_id=EFB89731.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 1515 1706 . - . ID=gene-HMPREF7215_2546;Name=HMPREF7215_2546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2546 GCA_000177335.1|ADFP01000121.1 Genbank CDS 1515 1706 . - 0 ID=cds-EFB89732.1;Parent=gene-HMPREF7215_2546;Dbxref=NCBI_GP:EFB89732.1;Name=EFB89732.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2546;product=hypothetical protein;protein_id=EFB89732.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 1703 5104 . - . ID=gene-HMPREF7215_2547;Name=HMPREF7215_2547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2547 GCA_000177335.1|ADFP01000121.1 Genbank CDS 1703 5104 . - 0 ID=cds-EFB89733.1;Parent=gene-HMPREF7215_2547;Dbxref=NCBI_GP:EFB89733.1;Name=EFB89733.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF7215_2547;product=arylsulfatase;protein_id=EFB89733.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 5209 5400 . + . ID=gene-HMPREF7215_2548;Name=HMPREF7215_2548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2548 GCA_000177335.1|ADFP01000121.1 Genbank CDS 5209 5400 . + 0 ID=cds-EFB89734.1;Parent=gene-HMPREF7215_2548;Dbxref=NCBI_GP:EFB89734.1;Name=EFB89734.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2548;product=hypothetical protein;protein_id=EFB89734.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 5540 6544 . - . ID=gene-HMPREF7215_2549;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2549 GCA_000177335.1|ADFP01000121.1 Genbank CDS 5540 6544 . - 0 ID=cds-EFB89735.1;Parent=gene-HMPREF7215_2549;Dbxref=NCBI_GP:EFB89735.1;Name=EFB89735.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE;locus_tag=HMPREF7215_2549;product=UDP-glucose 4-epimerase;protein_id=EFB89735.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 6805 6936 . + . ID=gene-HMPREF7215_2550;Name=HMPREF7215_2550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2550 GCA_000177335.1|ADFP01000121.1 Genbank CDS 6805 6936 . + 0 ID=cds-EFB89736.1;Parent=gene-HMPREF7215_2550;Dbxref=NCBI_GP:EFB89736.1;Name=EFB89736.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2550;product=hypothetical protein;protein_id=EFB89736.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 7330 9936 . + . ID=gene-HMPREF7215_2551;Name=HMPREF7215_2551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2551 GCA_000177335.1|ADFP01000121.1 Genbank CDS 7330 9936 . + 0 ID=cds-EFB89737.1;Parent=gene-HMPREF7215_2551;Dbxref=NCBI_GP:EFB89737.1;Name=EFB89737.1;Note=identified by match to protein family HMM PF00940%3B DNA-directed RNA polymerase%2C bacteriophage and type;gbkey=CDS;locus_tag=HMPREF7215_2551;product=DNA-directed RNA polymerase;protein_id=EFB89737.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 10522 10731 . + . ID=gene-HMPREF7215_2552;Name=HMPREF7215_2552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2552 GCA_000177335.1|ADFP01000121.1 Genbank CDS 10522 10731 . + 0 ID=cds-EFB89738.1;Parent=gene-HMPREF7215_2552;Dbxref=NCBI_GP:EFB89738.1;Name=EFB89738.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2552;product=hypothetical protein;protein_id=EFB89738.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 10737 11474 . + . ID=gene-HMPREF7215_2553;Name=HMPREF7215_2553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2553 GCA_000177335.1|ADFP01000121.1 Genbank CDS 10737 11474 . + 0 ID=cds-EFB89739.1;Parent=gene-HMPREF7215_2553;Dbxref=NCBI_GP:EFB89739.1;Name=EFB89739.1;gbkey=CDS;locus_tag=HMPREF7215_2553;product=hypothetical protein;protein_id=EFB89739.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 11475 11894 . + . ID=gene-HMPREF7215_2554;Name=HMPREF7215_2554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2554 GCA_000177335.1|ADFP01000121.1 Genbank CDS 11475 11894 . + 0 ID=cds-EFB89740.1;Parent=gene-HMPREF7215_2554;Dbxref=NCBI_GP:EFB89740.1;Name=EFB89740.1;Note=identified by match to protein family HMM PF05367;gbkey=CDS;locus_tag=HMPREF7215_2554;product=endodeoxyribonuclease 1;protein_id=EFB89740.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 11878 12354 . + . ID=gene-HMPREF7215_2555;Name=HMPREF7215_2555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2555 GCA_000177335.1|ADFP01000121.1 Genbank CDS 11878 12354 . + 0 ID=cds-EFB89741.1;Parent=gene-HMPREF7215_2555;Dbxref=NCBI_GP:EFB89741.1;Name=EFB89741.1;Note=identified by match to protein family HMM PF01510;gbkey=CDS;locus_tag=HMPREF7215_2555;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EFB89741.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 12344 12640 . + . ID=gene-HMPREF7215_2556;Name=HMPREF7215_2556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2556 GCA_000177335.1|ADFP01000121.1 Genbank CDS 12344 12640 . + 0 ID=cds-EFB89742.1;Parent=gene-HMPREF7215_2556;Dbxref=NCBI_GP:EFB89742.1;Name=EFB89742.1;gbkey=CDS;locus_tag=HMPREF7215_2556;product=hypothetical protein;protein_id=EFB89742.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 12661 12792 . - . ID=gene-HMPREF7215_2557;Name=HMPREF7215_2557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2557 GCA_000177335.1|ADFP01000121.1 Genbank CDS 12661 12792 . - 0 ID=cds-EFB89743.1;Parent=gene-HMPREF7215_2557;Dbxref=NCBI_GP:EFB89743.1;Name=EFB89743.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2557;product=hypothetical protein;protein_id=EFB89743.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 12791 14404 . + . ID=gene-HMPREF7215_2558;Name=HMPREF7215_2558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2558 GCA_000177335.1|ADFP01000121.1 Genbank CDS 12791 14404 . + 0 ID=cds-EFB89744.1;Parent=gene-HMPREF7215_2558;Dbxref=NCBI_GP:EFB89744.1;Name=EFB89744.1;Note=identified by match to protein family HMM PF01751;gbkey=CDS;locus_tag=HMPREF7215_2558;product=toprim domain protein;protein_id=EFB89744.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 14404 14580 . + . ID=gene-HMPREF7215_2559;Name=HMPREF7215_2559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2559 GCA_000177335.1|ADFP01000121.1 Genbank CDS 14404 14580 . + 0 ID=cds-EFB89745.1;Parent=gene-HMPREF7215_2559;Dbxref=NCBI_GP:EFB89745.1;Name=EFB89745.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2559;product=hypothetical protein;protein_id=EFB89745.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 14587 16557 . + . ID=gene-HMPREF7215_2560;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2560 GCA_000177335.1|ADFP01000121.1 Genbank CDS 14587 16557 . + 0 ID=cds-EFB89746.1;Parent=gene-HMPREF7215_2560;Dbxref=NCBI_GP:EFB89746.1;Name=EFB89746.1;Note=identified by match to protein family HMM PF00476;gbkey=CDS;gene=polA;locus_tag=HMPREF7215_2560;product=DNA-directed DNA polymerase;protein_id=EFB89746.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 16529 16723 . + . ID=gene-HMPREF7215_2561;Name=HMPREF7215_2561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2561 GCA_000177335.1|ADFP01000121.1 Genbank CDS 16529 16723 . + 0 ID=cds-EFB89747.1;Parent=gene-HMPREF7215_2561;Dbxref=NCBI_GP:EFB89747.1;Name=EFB89747.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2561;product=hypothetical protein;protein_id=EFB89747.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 16725 17384 . + . ID=gene-HMPREF7215_2562;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=HMPREF7215_2562 GCA_000177335.1|ADFP01000121.1 Genbank CDS 16725 17384 . + 0 ID=cds-EFB89748.1;Parent=gene-HMPREF7215_2562;Dbxref=NCBI_GP:EFB89748.1;Name=EFB89748.1;Note=identified by match to protein family HMM PF02511%3B match to protein family HMM TIGR02170;gbkey=CDS;gene=thyX;locus_tag=HMPREF7215_2562;product=thymidylate synthase%2C flavin-dependent;protein_id=EFB89748.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 17952 18185 . + . ID=gene-HMPREF7215_2563;Name=HMPREF7215_2563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2563 GCA_000177335.1|ADFP01000121.1 Genbank CDS 17952 18185 . + 0 ID=cds-EFB89749.1;Parent=gene-HMPREF7215_2563;Dbxref=NCBI_GP:EFB89749.1;Name=EFB89749.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2563;product=hypothetical protein;protein_id=EFB89749.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 18197 18433 . + . ID=gene-HMPREF7215_2564;Name=HMPREF7215_2564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2564 GCA_000177335.1|ADFP01000121.1 Genbank CDS 18197 18433 . + 0 ID=cds-EFB89750.1;Parent=gene-HMPREF7215_2564;Dbxref=NCBI_GP:EFB89750.1;Name=EFB89750.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2564;product=hypothetical protein;protein_id=EFB89750.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 18417 18782 . + . ID=gene-HMPREF7215_2565;Name=HMPREF7215_2565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2565 GCA_000177335.1|ADFP01000121.1 Genbank CDS 18417 18782 . + 0 ID=cds-EFB89751.1;Parent=gene-HMPREF7215_2565;Dbxref=NCBI_GP:EFB89751.1;Name=EFB89751.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2565;product=hypothetical protein;protein_id=EFB89751.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 18775 19533 . + . ID=gene-HMPREF7215_2566;Name=HMPREF7215_2566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2566 GCA_000177335.1|ADFP01000121.1 Genbank CDS 18775 19533 . + 0 ID=cds-EFB89752.1;Parent=gene-HMPREF7215_2566;Dbxref=NCBI_GP:EFB89752.1;Name=EFB89752.1;gbkey=CDS;locus_tag=HMPREF7215_2566;product=hypothetical protein;protein_id=EFB89752.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 19518 20147 . + . ID=gene-HMPREF7215_2567;Name=HMPREF7215_2567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2567 GCA_000177335.1|ADFP01000121.1 Genbank CDS 19518 20147 . + 0 ID=cds-EFB89753.1;Parent=gene-HMPREF7215_2567;Dbxref=NCBI_GP:EFB89753.1;Name=EFB89753.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2567;product=hypothetical protein;protein_id=EFB89753.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 20171 20332 . + . ID=gene-HMPREF7215_2568;Name=HMPREF7215_2568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2568 GCA_000177335.1|ADFP01000121.1 Genbank CDS 20171 20332 . + 0 ID=cds-EFB89754.1;Parent=gene-HMPREF7215_2568;Dbxref=NCBI_GP:EFB89754.1;Name=EFB89754.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2568;product=hypothetical protein;protein_id=EFB89754.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 20378 20737 . + . ID=gene-HMPREF7215_2569;Name=HMPREF7215_2569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2569 GCA_000177335.1|ADFP01000121.1 Genbank CDS 20378 20737 . + 0 ID=cds-EFB89755.1;Parent=gene-HMPREF7215_2569;Dbxref=NCBI_GP:EFB89755.1;Name=EFB89755.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2569;product=hypothetical protein;protein_id=EFB89755.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 20734 20946 . + . ID=gene-HMPREF7215_2570;Name=HMPREF7215_2570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2570 GCA_000177335.1|ADFP01000121.1 Genbank CDS 20734 20946 . + 0 ID=cds-EFB89756.1;Parent=gene-HMPREF7215_2570;Dbxref=NCBI_GP:EFB89756.1;Name=EFB89756.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2570;product=hypothetical protein;protein_id=EFB89756.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 20933 21148 . + . ID=gene-HMPREF7215_2571;Name=HMPREF7215_2571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2571 GCA_000177335.1|ADFP01000121.1 Genbank CDS 20933 21148 . + 0 ID=cds-EFB89757.1;Parent=gene-HMPREF7215_2571;Dbxref=NCBI_GP:EFB89757.1;Name=EFB89757.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2571;product=hypothetical protein;protein_id=EFB89757.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 21271 21396 . - . ID=gene-HMPREF7215_2572;Name=HMPREF7215_2572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2572 GCA_000177335.1|ADFP01000121.1 Genbank CDS 21271 21396 . - 0 ID=cds-EFB89758.1;Parent=gene-HMPREF7215_2572;Dbxref=NCBI_GP:EFB89758.1;Name=EFB89758.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2572;product=hypothetical protein;protein_id=EFB89758.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 21450 23054 . + . ID=gene-HMPREF7215_2573;Name=HMPREF7215_2573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2573 GCA_000177335.1|ADFP01000121.1 Genbank CDS 21450 23054 . + 0 ID=cds-EFB89759.1;Parent=gene-HMPREF7215_2573;Dbxref=NCBI_GP:EFB89759.1;Name=EFB89759.1;gbkey=CDS;locus_tag=HMPREF7215_2573;product=head-to-tail joining protein;protein_id=EFB89759.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 23215 23367 . + . ID=gene-HMPREF7215_2574;Name=HMPREF7215_2574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2574 GCA_000177335.1|ADFP01000121.1 Genbank CDS 23215 23367 . + 0 ID=cds-EFB89760.1;Parent=gene-HMPREF7215_2574;Dbxref=NCBI_GP:EFB89760.1;Name=EFB89760.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2574;product=hypothetical protein;protein_id=EFB89760.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 23367 24110 . + . ID=gene-HMPREF7215_2575;Name=HMPREF7215_2575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2575 GCA_000177335.1|ADFP01000121.1 Genbank CDS 23367 24110 . + 0 ID=cds-EFB89761.1;Parent=gene-HMPREF7215_2575;Dbxref=NCBI_GP:EFB89761.1;Name=EFB89761.1;gbkey=CDS;locus_tag=HMPREF7215_2575;product=hypothetical protein;protein_id=EFB89761.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 24167 25162 . + . ID=gene-HMPREF7215_2576;Name=HMPREF7215_2576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2576 GCA_000177335.1|ADFP01000121.1 Genbank CDS 24167 25162 . + 0 ID=cds-EFB89762.1;Parent=gene-HMPREF7215_2576;Dbxref=NCBI_GP:EFB89762.1;Name=EFB89762.1;gbkey=CDS;locus_tag=HMPREF7215_2576;product=hypothetical protein;protein_id=EFB89762.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 25241 26014 . + . ID=gene-HMPREF7215_2577;Name=HMPREF7215_2577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2577 GCA_000177335.1|ADFP01000121.1 Genbank CDS 25241 26014 . + 0 ID=cds-EFB89763.1;Parent=gene-HMPREF7215_2577;Dbxref=NCBI_GP:EFB89763.1;Name=EFB89763.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2577;product=hypothetical protein;protein_id=EFB89763.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 26029 26616 . + . ID=gene-HMPREF7215_2578;Name=HMPREF7215_2578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2578 GCA_000177335.1|ADFP01000121.1 Genbank CDS 26029 26616 . + 0 ID=cds-EFB89764.1;Parent=gene-HMPREF7215_2578;Dbxref=NCBI_GP:EFB89764.1;Name=EFB89764.1;gbkey=CDS;locus_tag=HMPREF7215_2578;product=tail tubular protein A;protein_id=EFB89764.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 26613 29210 . + . ID=gene-HMPREF7215_2579;Name=HMPREF7215_2579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2579 GCA_000177335.1|ADFP01000121.1 Genbank CDS 26613 29210 . + 0 ID=cds-EFB89765.1;Parent=gene-HMPREF7215_2579;Dbxref=NCBI_GP:EFB89765.1;Name=EFB89765.1;gbkey=CDS;locus_tag=HMPREF7215_2579;product=hypothetical protein;protein_id=EFB89765.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 29367 30527 . + . ID=gene-HMPREF7215_2580;Name=HMPREF7215_2580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2580 GCA_000177335.1|ADFP01000121.1 Genbank CDS 29367 30527 . + 0 ID=cds-EFB89766.1;Parent=gene-HMPREF7215_2580;Dbxref=NCBI_GP:EFB89766.1;Name=EFB89766.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01391;gbkey=CDS;locus_tag=HMPREF7215_2580;product=collagen triple helix repeat protein;protein_id=EFB89766.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 30538 31527 . + . ID=gene-HMPREF7215_2581;Name=HMPREF7215_2581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2581 GCA_000177335.1|ADFP01000121.1 Genbank CDS 30538 31527 . + 0 ID=cds-EFB89767.1;Parent=gene-HMPREF7215_2581;Dbxref=NCBI_GP:EFB89767.1;Name=EFB89767.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01391;gbkey=CDS;locus_tag=HMPREF7215_2581;product=collagen triple helix repeat protein;protein_id=EFB89767.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 31551 31829 . + . ID=gene-HMPREF7215_2582;Name=HMPREF7215_2582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2582 GCA_000177335.1|ADFP01000121.1 Genbank CDS 31551 31829 . + 0 ID=cds-EFB89768.1;Parent=gene-HMPREF7215_2582;Dbxref=NCBI_GP:EFB89768.1;Name=EFB89768.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2582;product=hypothetical protein;protein_id=EFB89768.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 31819 32625 . + . ID=gene-HMPREF7215_2583;Name=HMPREF7215_2583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2583 GCA_000177335.1|ADFP01000121.1 Genbank CDS 31819 32625 . + 0 ID=cds-EFB89769.1;Parent=gene-HMPREF7215_2583;Dbxref=NCBI_GP:EFB89769.1;Name=EFB89769.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2583;product=hypothetical protein;protein_id=EFB89769.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 32707 33603 . + . ID=gene-HMPREF7215_2584;Name=HMPREF7215_2584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2584 GCA_000177335.1|ADFP01000121.1 Genbank CDS 32707 33603 . + 0 ID=cds-EFB89770.1;Parent=gene-HMPREF7215_2584;Dbxref=NCBI_GP:EFB89770.1;Name=EFB89770.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2584;product=hypothetical protein;protein_id=EFB89770.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 33591 34277 . + . ID=gene-HMPREF7215_2585;Name=HMPREF7215_2585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2585 GCA_000177335.1|ADFP01000121.1 Genbank CDS 33591 34277 . + 0 ID=cds-EFB89771.1;Parent=gene-HMPREF7215_2585;Dbxref=NCBI_GP:EFB89771.1;Name=EFB89771.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2585;product=hypothetical protein;protein_id=EFB89771.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 34452 34613 . + . ID=gene-HMPREF7215_2586;Name=HMPREF7215_2586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2586 GCA_000177335.1|ADFP01000121.1 Genbank CDS 34452 34613 . + 0 ID=cds-EFB89772.1;Parent=gene-HMPREF7215_2586;Dbxref=NCBI_GP:EFB89772.1;Name=EFB89772.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2586;product=hypothetical protein;protein_id=EFB89772.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 34630 34878 . + . ID=gene-HMPREF7215_2587;Name=HMPREF7215_2587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2587 GCA_000177335.1|ADFP01000121.1 Genbank CDS 34630 34878 . + 0 ID=cds-EFB89773.1;Parent=gene-HMPREF7215_2587;Dbxref=NCBI_GP:EFB89773.1;Name=EFB89773.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2587;product=hypothetical protein;protein_id=EFB89773.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 34916 35194 . + . ID=gene-HMPREF7215_2588;Name=HMPREF7215_2588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2588 GCA_000177335.1|ADFP01000121.1 Genbank CDS 34916 35194 . + 0 ID=cds-EFB89774.1;Parent=gene-HMPREF7215_2588;Dbxref=NCBI_GP:EFB89774.1;Name=EFB89774.1;gbkey=CDS;locus_tag=HMPREF7215_2588;product=hypothetical protein;protein_id=EFB89774.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 35312 35554 . + . ID=gene-HMPREF7215_2589;Name=HMPREF7215_2589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2589 GCA_000177335.1|ADFP01000121.1 Genbank CDS 35312 35554 . + 0 ID=cds-EFB89775.1;Parent=gene-HMPREF7215_2589;Dbxref=NCBI_GP:EFB89775.1;Name=EFB89775.1;gbkey=CDS;locus_tag=HMPREF7215_2589;product=hypothetical protein;protein_id=EFB89775.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 35554 36042 . + . ID=gene-HMPREF7215_2590;Name=HMPREF7215_2590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2590 GCA_000177335.1|ADFP01000121.1 Genbank CDS 35554 36042 . + 0 ID=cds-EFB89776.1;Parent=gene-HMPREF7215_2590;Dbxref=NCBI_GP:EFB89776.1;Name=EFB89776.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2590;product=hypothetical protein;protein_id=EFB89776.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 36011 37786 . + . ID=gene-HMPREF7215_2591;Name=HMPREF7215_2591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2591 GCA_000177335.1|ADFP01000121.1 Genbank CDS 36011 37786 . + 0 ID=cds-EFB89777.1;Parent=gene-HMPREF7215_2591;Dbxref=NCBI_GP:EFB89777.1;Name=EFB89777.1;gbkey=CDS;locus_tag=HMPREF7215_2591;product=DNA maturase B;protein_id=EFB89777.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 37761 37997 . + . ID=gene-HMPREF7215_2592;Name=HMPREF7215_2592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2592 GCA_000177335.1|ADFP01000121.1 Genbank CDS 37761 37997 . + 0 ID=cds-EFB89778.1;Parent=gene-HMPREF7215_2592;Dbxref=NCBI_GP:EFB89778.1;Name=EFB89778.1;gbkey=CDS;locus_tag=HMPREF7215_2592;product=hypothetical protein;protein_id=EFB89778.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 38033 38629 . + . ID=gene-HMPREF7215_2593;Name=HMPREF7215_2593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2593 GCA_000177335.1|ADFP01000121.1 Genbank CDS 38033 38629 . + 0 ID=cds-EFB89779.1;Parent=gene-HMPREF7215_2593;Dbxref=NCBI_GP:EFB89779.1;Name=EFB89779.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2593;product=hypothetical protein;protein_id=EFB89779.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 38626 40587 . + . ID=gene-HMPREF7215_2594;Name=HMPREF7215_2594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2594 GCA_000177335.1|ADFP01000121.1 Genbank CDS 38626 40587 . + 0 ID=cds-EFB89780.1;Parent=gene-HMPREF7215_2594;Dbxref=NCBI_GP:EFB89780.1;Name=EFB89780.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2594;product=hypothetical protein;protein_id=EFB89780.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 40541 44041 . + . ID=gene-HMPREF7215_2595;Name=HMPREF7215_2595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2595 GCA_000177335.1|ADFP01000121.1 Genbank CDS 40541 44041 . + 0 ID=cds-EFB89781.1;Parent=gene-HMPREF7215_2595;Dbxref=NCBI_GP:EFB89781.1;Name=EFB89781.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2595;product=hypothetical protein;protein_id=EFB89781.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 45660 45983 . - . ID=gene-HMPREF7215_2596;Name=HMPREF7215_2596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2596 GCA_000177335.1|ADFP01000121.1 Genbank CDS 45660 45983 . - 0 ID=cds-EFB89782.1;Parent=gene-HMPREF7215_2596;Dbxref=NCBI_GP:EFB89782.1;Name=EFB89782.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2596;product=hypothetical protein;protein_id=EFB89782.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 46662 46958 . + . ID=gene-HMPREF7215_2597;Name=HMPREF7215_2597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2597 GCA_000177335.1|ADFP01000121.1 Genbank CDS 46662 46958 . + 0 ID=cds-EFB89783.1;Parent=gene-HMPREF7215_2597;Dbxref=NCBI_GP:EFB89783.1;Name=EFB89783.1;gbkey=CDS;locus_tag=HMPREF7215_2597;product=hypothetical protein;protein_id=EFB89783.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 47213 47392 . + . ID=gene-HMPREF7215_2598;Name=HMPREF7215_2598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2598 GCA_000177335.1|ADFP01000121.1 Genbank CDS 47213 47392 . + 0 ID=cds-EFB89784.1;Parent=gene-HMPREF7215_2598;Dbxref=NCBI_GP:EFB89784.1;Name=EFB89784.1;gbkey=CDS;locus_tag=HMPREF7215_2598;product=hypothetical protein;protein_id=EFB89784.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 47406 47663 . + . ID=gene-HMPREF7215_2599;Name=HMPREF7215_2599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2599 GCA_000177335.1|ADFP01000121.1 Genbank CDS 47406 47663 . + 0 ID=cds-EFB89785.1;Parent=gene-HMPREF7215_2599;Dbxref=NCBI_GP:EFB89785.1;Name=EFB89785.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2599;product=hypothetical protein;protein_id=EFB89785.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 47994 48413 . + . ID=gene-HMPREF7215_2600;Name=HMPREF7215_2600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2600 GCA_000177335.1|ADFP01000121.1 Genbank CDS 47994 48413 . + 0 ID=cds-EFB89786.1;Parent=gene-HMPREF7215_2600;Dbxref=NCBI_GP:EFB89786.1;Name=EFB89786.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2600;product=hypothetical protein;protein_id=EFB89786.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 48559 48816 . + . ID=gene-HMPREF7215_2601;Name=HMPREF7215_2601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2601 GCA_000177335.1|ADFP01000121.1 Genbank CDS 48559 48816 . + 0 ID=cds-EFB89787.1;Parent=gene-HMPREF7215_2601;Dbxref=NCBI_GP:EFB89787.1;Name=EFB89787.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2601;product=hypothetical protein;protein_id=EFB89787.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 49340 50350 . + . ID=gene-HMPREF7215_2602;Name=HMPREF7215_2602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2602 GCA_000177335.1|ADFP01000121.1 Genbank CDS 49340 50350 . + 0 ID=cds-EFB89788.1;Parent=gene-HMPREF7215_2602;Dbxref=NCBI_GP:EFB89788.1;Name=EFB89788.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF7215_2602;product=site-specific recombinase%2C phage integrase family;protein_id=EFB89788.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 50426 50514 . - . ID=gene-HMPREF7215_2603;Name=HMPREF7215_2603;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2603 GCA_000177335.1|ADFP01000121.1 Genbank tRNA 50426 50514 . - . ID=rna-HMPREF7215_2603;Parent=gene-HMPREF7215_2603;gbkey=tRNA;locus_tag=HMPREF7215_2603;product=tRNA-Leu GCA_000177335.1|ADFP01000121.1 Genbank exon 50426 50514 . - . ID=exon-HMPREF7215_2603-1;Parent=rna-HMPREF7215_2603;gbkey=tRNA;locus_tag=HMPREF7215_2603;product=tRNA-Leu GCA_000177335.1|ADFP01000121.1 Genbank gene 50618 50743 . + . ID=gene-HMPREF7215_2604;Name=HMPREF7215_2604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2604 GCA_000177335.1|ADFP01000121.1 Genbank CDS 50618 50743 . + 0 ID=cds-EFB89789.1;Parent=gene-HMPREF7215_2604;Dbxref=NCBI_GP:EFB89789.1;Name=EFB89789.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2604;product=hypothetical protein;protein_id=EFB89789.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 50801 51067 . + . ID=gene-HMPREF7215_2605;Name=HMPREF7215_2605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2605 GCA_000177335.1|ADFP01000121.1 Genbank CDS 50801 51067 . + 0 ID=cds-EFB89790.1;Parent=gene-HMPREF7215_2605;Dbxref=NCBI_GP:EFB89790.1;Name=EFB89790.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2605;product=hypothetical protein;protein_id=EFB89790.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 51187 52662 . + . ID=gene-HMPREF7215_2606;Name=HMPREF7215_2606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2606 GCA_000177335.1|ADFP01000121.1 Genbank CDS 51187 52662 . + 0 ID=cds-EFB89791.1;Parent=gene-HMPREF7215_2606;Dbxref=NCBI_GP:EFB89791.1;Name=EFB89791.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF7215_2606;product=arylsulfatase;protein_id=EFB89791.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 52786 53142 . + . ID=gene-HMPREF7215_2607;Name=HMPREF7215_2607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2607 GCA_000177335.1|ADFP01000121.1 Genbank CDS 52786 53142 . + 0 ID=cds-EFB89792.1;Parent=gene-HMPREF7215_2607;Dbxref=NCBI_GP:EFB89792.1;Name=EFB89792.1;gbkey=CDS;locus_tag=HMPREF7215_2607;product=hypothetical protein;protein_id=EFB89792.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 53299 54723 . - . ID=gene-HMPREF7215_2608;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2608 GCA_000177335.1|ADFP01000121.1 Genbank CDS 53299 54723 . - 0 ID=cds-EFB89793.1;Parent=gene-HMPREF7215_2608;Dbxref=NCBI_GP:EFB89793.1;Name=EFB89793.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;locus_tag=HMPREF7215_2608;product=cysteine--tRNA ligase;protein_id=EFB89793.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 54867 56594 . + . ID=gene-HMPREF7215_2609;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2609 GCA_000177335.1|ADFP01000121.1 Genbank CDS 54867 56594 . + 0 ID=cds-EFB89794.1;Parent=gene-HMPREF7215_2609;Dbxref=NCBI_GP:EFB89794.1;Name=EFB89794.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;locus_tag=HMPREF7215_2609;product=excinuclease ABC%2C C subunit;protein_id=EFB89794.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 56591 57685 . + . ID=gene-HMPREF7215_2610;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2610 GCA_000177335.1|ADFP01000121.1 Genbank CDS 56591 57685 . + 0 ID=cds-EFB89795.1;Parent=gene-HMPREF7215_2610;Dbxref=NCBI_GP:EFB89795.1;Name=EFB89795.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00326;gbkey=CDS;gene=ribD;locus_tag=HMPREF7215_2610;product=riboflavin biosynthesis protein RibD;protein_id=EFB89795.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 57658 58311 . + . ID=gene-HMPREF7215_2611;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2611 GCA_000177335.1|ADFP01000121.1 Genbank CDS 57658 58311 . + 0 ID=cds-EFB89796.1;Parent=gene-HMPREF7215_2611;Dbxref=NCBI_GP:EFB89796.1;Name=EFB89796.1;Note=identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187;gbkey=CDS;gene=ribE;locus_tag=HMPREF7215_2611;product=riboflavin synthase%2C alpha subunit;protein_id=EFB89796.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 58422 58898 . + . ID=gene-HMPREF7215_2612;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HMPREF7215_2612 GCA_000177335.1|ADFP01000121.1 Genbank CDS 58422 58898 . + 0 ID=cds-EFB89797.1;Parent=gene-HMPREF7215_2612;Dbxref=NCBI_GP:EFB89797.1;Name=EFB89797.1;Note=identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114;gbkey=CDS;gene=ribH;locus_tag=HMPREF7215_2612;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=EFB89797.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 58930 60216 . + . ID=gene-HMPREF7215_2614;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2614 GCA_000177335.1|ADFP01000121.1 Genbank CDS 58930 60216 . + 0 ID=cds-EFB89798.1;Parent=gene-HMPREF7215_2614;Dbxref=NCBI_GP:EFB89798.1;Name=EFB89798.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414;gbkey=CDS;gene=serS;locus_tag=HMPREF7215_2614;product=serine--tRNA ligase;protein_id=EFB89798.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 60185 60517 . - . ID=gene-HMPREF7215_2613;Name=HMPREF7215_2613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2613 GCA_000177335.1|ADFP01000121.1 Genbank CDS 60185 60517 . - 0 ID=cds-EFB89799.1;Parent=gene-HMPREF7215_2613;Dbxref=NCBI_GP:EFB89799.1;Name=EFB89799.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2613;product=hypothetical protein;protein_id=EFB89799.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 60569 62308 . + . ID=gene-HMPREF7215_2615;Name=HMPREF7215_2615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2615 GCA_000177335.1|ADFP01000121.1 Genbank CDS 60569 62308 . + 0 ID=cds-EFB89800.1;Parent=gene-HMPREF7215_2615;Dbxref=NCBI_GP:EFB89800.1;Name=EFB89800.1;Note=identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696;gbkey=CDS;locus_tag=HMPREF7215_2615;product=glycosyltransferase%2C WecB/TagA/CpsF family;protein_id=EFB89800.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 62301 62768 . + . ID=gene-HMPREF7215_2616;Name=HMPREF7215_2616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2616 GCA_000177335.1|ADFP01000121.1 Genbank CDS 62301 62768 . + 0 ID=cds-EFB89801.1;Parent=gene-HMPREF7215_2616;Dbxref=NCBI_GP:EFB89801.1;Name=EFB89801.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;locus_tag=HMPREF7215_2616;product=CBS domain protein;protein_id=EFB89801.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 62765 63094 . + . ID=gene-HMPREF7215_2617;Name=HMPREF7215_2617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2617 GCA_000177335.1|ADFP01000121.1 Genbank CDS 62765 63094 . + 0 ID=cds-EFB89802.1;Parent=gene-HMPREF7215_2617;Dbxref=NCBI_GP:EFB89802.1;Name=EFB89802.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2617;product=hypothetical protein;protein_id=EFB89802.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 63094 64989 . + . ID=gene-HMPREF7215_2618;Name=HMPREF7215_2618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2618 GCA_000177335.1|ADFP01000121.1 Genbank CDS 63094 64989 . + 0 ID=cds-EFB89803.1;Parent=gene-HMPREF7215_2618;Dbxref=NCBI_GP:EFB89803.1;Name=EFB89803.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2618;product=putative V-type sodium ATPase%2C I subunit;protein_id=EFB89803.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 64971 65189 . + . ID=gene-HMPREF7215_2619;Name=HMPREF7215_2619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2619 GCA_000177335.1|ADFP01000121.1 Genbank CDS 64971 65189 . + 0 ID=cds-EFB89804.1;Parent=gene-HMPREF7215_2619;Dbxref=NCBI_GP:EFB89804.1;Name=EFB89804.1;Note=identified by match to protein family HMM PF00137;gbkey=CDS;locus_tag=HMPREF7215_2619;product=ATP synthase subunit C;protein_id=EFB89804.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 65200 65772 . + . ID=gene-HMPREF7215_2620;Name=HMPREF7215_2620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2620 GCA_000177335.1|ADFP01000121.1 Genbank CDS 65200 65772 . + 0 ID=cds-EFB89805.1;Parent=gene-HMPREF7215_2620;Dbxref=NCBI_GP:EFB89805.1;Name=EFB89805.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2620;product=hypothetical protein;protein_id=EFB89805.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 65744 66772 . + . ID=gene-HMPREF7215_2621;Name=HMPREF7215_2621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2621 GCA_000177335.1|ADFP01000121.1 Genbank CDS 65744 66772 . + 0 ID=cds-EFB89806.1;Parent=gene-HMPREF7215_2621;Dbxref=NCBI_GP:EFB89806.1;Name=EFB89806.1;gbkey=CDS;locus_tag=HMPREF7215_2621;product=putative ATP synthase%2C subunit C;protein_id=EFB89806.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 66781 67041 . + . ID=gene-HMPREF7215_2622;Name=HMPREF7215_2622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2622 GCA_000177335.1|ADFP01000121.1 Genbank CDS 66781 67041 . + 0 ID=cds-EFB89807.1;Parent=gene-HMPREF7215_2622;Dbxref=NCBI_GP:EFB89807.1;Name=EFB89807.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2622;product=hypothetical protein;protein_id=EFB89807.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 67110 68360 . + . ID=gene-HMPREF7215_2623;Name=HMPREF7215_2623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2623 GCA_000177335.1|ADFP01000121.1 Genbank CDS 67110 68360 . + 0 ID=cds-EFB89808.1;Parent=gene-HMPREF7215_2623;Dbxref=NCBI_GP:EFB89808.1;Name=EFB89808.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2623;product=hypothetical protein;protein_id=EFB89808.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 68357 69568 . + . ID=gene-HMPREF7215_2624;Name=HMPREF7215_2624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2624 GCA_000177335.1|ADFP01000121.1 Genbank CDS 68357 69568 . + 0 ID=cds-EFB89809.1;Parent=gene-HMPREF7215_2624;Dbxref=NCBI_GP:EFB89809.1;Name=EFB89809.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2624;product=hypothetical protein;protein_id=EFB89809.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 69565 70131 . + . ID=gene-HMPREF7215_2625;Name=HMPREF7215_2625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2625 GCA_000177335.1|ADFP01000121.1 Genbank CDS 69565 70131 . + 0 ID=cds-EFB89810.1;Parent=gene-HMPREF7215_2625;Dbxref=NCBI_GP:EFB89810.1;Name=EFB89810.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2625;product=hypothetical protein;protein_id=EFB89810.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 70128 70598 . + . ID=gene-HMPREF7215_2626;Name=HMPREF7215_2626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2626 GCA_000177335.1|ADFP01000121.1 Genbank CDS 70128 70598 . + 0 ID=cds-EFB89811.1;Parent=gene-HMPREF7215_2626;Dbxref=NCBI_GP:EFB89811.1;Name=EFB89811.1;Note=identified by match to protein family HMM PF02590;gbkey=CDS;locus_tag=HMPREF7215_2626;product=putative rRNA large subunit m3Psi methyltransferase RlmH;protein_id=EFB89811.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 70628 70957 . + . ID=gene-HMPREF7215_2627;Name=HMPREF7215_2627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2627 GCA_000177335.1|ADFP01000121.1 Genbank CDS 70628 70957 . + 0 ID=cds-EFB89812.1;Parent=gene-HMPREF7215_2627;Dbxref=NCBI_GP:EFB89812.1;Name=EFB89812.1;Note=identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;locus_tag=HMPREF7215_2627;product=DNA-binding protein%2C YbaB/EbfC family;protein_id=EFB89812.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 70967 71572 . + . ID=gene-HMPREF7215_2628;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF7215_2628 GCA_000177335.1|ADFP01000121.1 Genbank CDS 70967 71572 . + 0 ID=cds-EFB89813.1;Parent=gene-HMPREF7215_2628;Dbxref=NCBI_GP:EFB89813.1;Name=EFB89813.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615;gbkey=CDS;gene=recR;locus_tag=HMPREF7215_2628;product=recombination protein RecR;protein_id=EFB89813.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 71640 72785 . + . ID=gene-HMPREF7215_2629;Name=HMPREF7215_2629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2629 GCA_000177335.1|ADFP01000121.1 Genbank CDS 71640 72785 . + 0 ID=cds-EFB89814.1;Parent=gene-HMPREF7215_2629;Dbxref=NCBI_GP:EFB89814.1;Name=EFB89814.1;Note=identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938;gbkey=CDS;locus_tag=HMPREF7215_2629;product=PIN domain protein;protein_id=EFB89814.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 72782 73891 . + . ID=gene-HMPREF7215_2630;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2630 GCA_000177335.1|ADFP01000121.1 Genbank CDS 72782 73891 . + 0 ID=cds-EFB89815.1;Parent=gene-HMPREF7215_2630;Dbxref=NCBI_GP:EFB89815.1;Name=EFB89815.1;Note=identified by match to protein family HMM PF01128%3B match to protein family HMM PF02542%3B match to protein family HMM TIGR00151;gbkey=CDS;gene=ispF;locus_tag=HMPREF7215_2630;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=EFB89815.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 74067 74564 . + . ID=gene-HMPREF7215_2631;Name=HMPREF7215_2631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2631 GCA_000177335.1|ADFP01000121.1 Genbank CDS 74067 74564 . + 0 ID=cds-EFB89816.1;Parent=gene-HMPREF7215_2631;Dbxref=NCBI_GP:EFB89816.1;Name=EFB89816.1;Note=identified by match to protein family HMM PF02576;gbkey=CDS;locus_tag=HMPREF7215_2631;product=hypothetical protein;protein_id=EFB89816.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 74566 75660 . + . ID=gene-HMPREF7215_2632;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2632 GCA_000177335.1|ADFP01000121.1 Genbank CDS 74566 75660 . + 0 ID=cds-EFB89817.1;Parent=gene-HMPREF7215_2632;Dbxref=NCBI_GP:EFB89817.1;Name=EFB89817.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953;gbkey=CDS;gene=nusA;locus_tag=HMPREF7215_2632;product=transcription termination factor NusA;protein_id=EFB89817.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 75657 76265 . + . ID=gene-HMPREF7215_2633;Name=HMPREF7215_2633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2633 GCA_000177335.1|ADFP01000121.1 Genbank CDS 75657 76265 . + 0 ID=cds-EFB89818.1;Parent=gene-HMPREF7215_2633;Dbxref=NCBI_GP:EFB89818.1;Name=EFB89818.1;Note=identified by match to protein family HMM PF01248%3B match to protein family HMM PF04296;gbkey=CDS;locus_tag=HMPREF7215_2633;product=hypothetical protein;protein_id=EFB89818.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 76258 78321 . + . ID=gene-HMPREF7215_2634;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2634 GCA_000177335.1|ADFP01000121.1 Genbank CDS 76258 78321 . + 0 ID=cds-EFB89819.1;Parent=gene-HMPREF7215_2634;Dbxref=NCBI_GP:EFB89819.1;Name=EFB89819.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487;gbkey=CDS;gene=infB;locus_tag=HMPREF7215_2634;product=translation initiation factor IF-2;protein_id=EFB89819.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 78424 78819 . + . ID=gene-HMPREF7215_2635;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2635 GCA_000177335.1|ADFP01000121.1 Genbank CDS 78424 78819 . + 0 ID=cds-EFB89820.1;Parent=gene-HMPREF7215_2635;Dbxref=NCBI_GP:EFB89820.1;Name=EFB89820.1;Note=identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082;gbkey=CDS;gene=rbfA;locus_tag=HMPREF7215_2635;product=ribosome-binding factor A;protein_id=EFB89820.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 78812 79747 . + . ID=gene-HMPREF7215_2636;Name=HMPREF7215_2636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2636 GCA_000177335.1|ADFP01000121.1 Genbank CDS 78812 79747 . + 0 ID=cds-EFB89821.1;Parent=gene-HMPREF7215_2636;Dbxref=NCBI_GP:EFB89821.1;Name=EFB89821.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF7215_2636;product=DHHA1 domain protein;protein_id=EFB89821.1;transl_table=11 GCA_000177335.1|ADFP01000121.1 Genbank gene 79740 80239 . + . ID=gene-HMPREF7215_2637;Name=HMPREF7215_2637;end_range=80239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2637;partial=true GCA_000177335.1|ADFP01000121.1 Genbank CDS 79740 80239 . + 0 ID=cds-EFB89822.1;Parent=gene-HMPREF7215_2637;Dbxref=NCBI_GP:EFB89822.1;Name=EFB89822.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01509;end_range=80239,.;gbkey=CDS;locus_tag=HMPREF7215_2637;partial=true;product=putative tRNA pseudouridine synthase B;protein_id=EFB89822.1;transl_table=11 ##sequence-region ADFP01000120.1 1 13041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000120.1 Genbank region 1 13041 . + . ID=ADFP01000120.1:1..13041;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000120.1 Genbank gene 1 98 . - . ID=gene-HMPREF7215_1449;Name=HMPREF7215_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1449;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000120.1 Genbank CDS 1 98 . - 0 ID=cds-EFB89823.1;Parent=gene-HMPREF7215_1449;Dbxref=NCBI_GP:EFB89823.1;Name=EFB89823.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1449;partial=true;product=hypothetical protein;protein_id=EFB89823.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 95 826 . - . ID=gene-HMPREF7215_1450;Name=HMPREF7215_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1450 GCA_000177335.1|ADFP01000120.1 Genbank CDS 95 826 . - 0 ID=cds-EFB89824.1;Parent=gene-HMPREF7215_1450;Dbxref=NCBI_GP:EFB89824.1;Name=EFB89824.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1450;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89824.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 819 1580 . - . ID=gene-HMPREF7215_1451;Name=HMPREF7215_1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1451 GCA_000177335.1|ADFP01000120.1 Genbank CDS 819 1580 . - 0 ID=cds-EFB89825.1;Parent=gene-HMPREF7215_1451;Dbxref=NCBI_GP:EFB89825.1;Name=EFB89825.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1451;product=ABC transporter%2C permease protein;protein_id=EFB89825.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 1577 2788 . - . ID=gene-HMPREF7215_1452;Name=hydF;gbkey=Gene;gene=hydF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1452 GCA_000177335.1|ADFP01000120.1 Genbank CDS 1577 2788 . - 0 ID=cds-EFB89826.1;Parent=gene-HMPREF7215_1452;Dbxref=NCBI_GP:EFB89826.1;Name=EFB89826.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231;gbkey=CDS;gene=hydF;locus_tag=HMPREF7215_1452;product=hydrogenase maturation GTPase HydF;protein_id=EFB89826.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 2788 2991 . + . ID=gene-HMPREF7215_1453;Name=HMPREF7215_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1453 GCA_000177335.1|ADFP01000120.1 Genbank CDS 2788 2991 . + 0 ID=cds-EFB89827.1;Parent=gene-HMPREF7215_1453;Dbxref=NCBI_GP:EFB89827.1;Name=EFB89827.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1453;product=hypothetical protein;protein_id=EFB89827.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 3042 3911 . + . ID=gene-HMPREF7215_1455;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1455 GCA_000177335.1|ADFP01000120.1 Genbank CDS 3042 3911 . + 0 ID=cds-EFB89828.1;Parent=gene-HMPREF7215_1455;Dbxref=NCBI_GP:EFB89828.1;Name=EFB89828.1;Note=identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081;gbkey=CDS;gene=purC;locus_tag=HMPREF7215_1455;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=EFB89828.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 3892 4047 . - . ID=gene-HMPREF7215_1454;Name=HMPREF7215_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1454 GCA_000177335.1|ADFP01000120.1 Genbank CDS 3892 4047 . - 0 ID=cds-EFB89829.1;Parent=gene-HMPREF7215_1454;Dbxref=NCBI_GP:EFB89829.1;Name=EFB89829.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1454;product=hypothetical protein;protein_id=EFB89829.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 4077 4298 . + . ID=gene-HMPREF7215_1456;Name=HMPREF7215_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1456 GCA_000177335.1|ADFP01000120.1 Genbank CDS 4077 4298 . + 0 ID=cds-EFB89830.1;Parent=gene-HMPREF7215_1456;Dbxref=NCBI_GP:EFB89830.1;Name=EFB89830.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1456;product=hypothetical protein;protein_id=EFB89830.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 4328 4921 . + . ID=gene-HMPREF7215_1457;Name=HMPREF7215_1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1457 GCA_000177335.1|ADFP01000120.1 Genbank CDS 4328 4921 . + 0 ID=cds-EFB89831.1;Parent=gene-HMPREF7215_1457;Dbxref=NCBI_GP:EFB89831.1;Name=EFB89831.1;gbkey=CDS;locus_tag=HMPREF7215_1457;product=hypothetical protein;protein_id=EFB89831.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 5032 6327 . + . ID=gene-HMPREF7215_1458;Name=HMPREF7215_1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1458 GCA_000177335.1|ADFP01000120.1 Genbank CDS 5032 6327 . + 0 ID=cds-EFB89832.1;Parent=gene-HMPREF7215_1458;Dbxref=NCBI_GP:EFB89832.1;Name=EFB89832.1;Note=identified by match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF7215_1458;product=citrate transporter;protein_id=EFB89832.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 6343 6528 . + . ID=gene-HMPREF7215_1459;Name=HMPREF7215_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1459 GCA_000177335.1|ADFP01000120.1 Genbank CDS 6343 6528 . + 0 ID=cds-EFB89833.1;Parent=gene-HMPREF7215_1459;Dbxref=NCBI_GP:EFB89833.1;Name=EFB89833.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1459;product=hypothetical protein;protein_id=EFB89833.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 6542 7726 . + . ID=gene-HMPREF7215_1460;Name=HMPREF7215_1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1460 GCA_000177335.1|ADFP01000120.1 Genbank CDS 6542 7726 . + 0 ID=cds-EFB89834.1;Parent=gene-HMPREF7215_1460;Dbxref=NCBI_GP:EFB89834.1;Name=EFB89834.1;gbkey=CDS;locus_tag=HMPREF7215_1460;product=hypothetical protein;protein_id=EFB89834.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 7818 9425 . + . ID=gene-HMPREF7215_1461;Name=HMPREF7215_1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1461 GCA_000177335.1|ADFP01000120.1 Genbank CDS 7818 9425 . + 0 ID=cds-EFB89835.1;Parent=gene-HMPREF7215_1461;Dbxref=NCBI_GP:EFB89835.1;Name=EFB89835.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_1461;product=peptidase%2C C69 family;protein_id=EFB89835.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 9678 10493 . + . ID=gene-HMPREF7215_1462;Name=HMPREF7215_1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1462 GCA_000177335.1|ADFP01000120.1 Genbank CDS 9678 10493 . + 0 ID=cds-EFB89836.1;Parent=gene-HMPREF7215_1462;Dbxref=NCBI_GP:EFB89836.1;Name=EFB89836.1;Note=identified by match to protein family HMM PF02409;gbkey=CDS;locus_tag=HMPREF7215_1462;product=methyltransferase%2C TIGR00027 family;protein_id=EFB89836.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 10602 10856 . + . ID=gene-HMPREF7215_1464;Name=HMPREF7215_1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1464 GCA_000177335.1|ADFP01000120.1 Genbank CDS 10602 10856 . + 0 ID=cds-EFB89837.1;Parent=gene-HMPREF7215_1464;Dbxref=NCBI_GP:EFB89837.1;Name=EFB89837.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1464;product=hypothetical protein;protein_id=EFB89837.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 10811 11413 . - . ID=gene-HMPREF7215_1463;Name=HMPREF7215_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1463 GCA_000177335.1|ADFP01000120.1 Genbank CDS 10811 11413 . - 0 ID=cds-EFB89838.1;Parent=gene-HMPREF7215_1463;Dbxref=NCBI_GP:EFB89838.1;Name=EFB89838.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00383%3B match to protein family HMM PF08211;gbkey=CDS;locus_tag=HMPREF7215_1463;product=putative cytidine deaminase;protein_id=EFB89838.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 11419 11550 . - . ID=gene-HMPREF7215_1465;Name=HMPREF7215_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1465 GCA_000177335.1|ADFP01000120.1 Genbank CDS 11419 11550 . - 0 ID=cds-EFB89839.1;Parent=gene-HMPREF7215_1465;Dbxref=NCBI_GP:EFB89839.1;Name=EFB89839.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1465;product=hypothetical protein;protein_id=EFB89839.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 11547 12695 . - . ID=gene-HMPREF7215_1466;Name=HMPREF7215_1466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1466 GCA_000177335.1|ADFP01000120.1 Genbank CDS 11547 12695 . - 0 ID=cds-EFB89840.1;Parent=gene-HMPREF7215_1466;Dbxref=NCBI_GP:EFB89840.1;Name=EFB89840.1;Note=identified by match to protein family HMM PF00291;gbkey=CDS;locus_tag=HMPREF7215_1466;product=putative threonine synthase;protein_id=EFB89840.1;transl_table=11 GCA_000177335.1|ADFP01000120.1 Genbank gene 12784 13041 . + . ID=gene-HMPREF7215_1467;Name=HMPREF7215_1467;end_range=13041,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1467;partial=true GCA_000177335.1|ADFP01000120.1 Genbank CDS 12784 13041 . + 0 ID=cds-EFB89841.1;Parent=gene-HMPREF7215_1467;Dbxref=NCBI_GP:EFB89841.1;Name=EFB89841.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=13041,.;gbkey=CDS;locus_tag=HMPREF7215_1467;partial=true;product=hypothetical protein;protein_id=EFB89841.1;transl_table=11 ##sequence-region ADFP01000119.1 1 510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000119.1 Genbank region 1 510 . + . ID=ADFP01000119.1:1..510;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000119.1 Genbank gene 1 382 . + . ID=gene-HMPREF7215_1669;Name=HMPREF7215_1669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1669;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000119.1 Genbank CDS 1 382 . + 1 ID=cds-EFB89842.1;Parent=gene-HMPREF7215_1669;Dbxref=NCBI_GP:EFB89842.1;Name=EFB89842.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1669;partial=true;product=transposase-like protein;protein_id=EFB89842.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000118.1 1 1464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000118.1 Genbank region 1 1464 . + . ID=ADFP01000118.1:1..1464;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000118.1 Genbank gene 1 515 . - . ID=gene-HMPREF7215_1658;Name=HMPREF7215_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1658;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000118.1 Genbank CDS 1 515 . - 0 ID=cds-EFB89843.1;Parent=gene-HMPREF7215_1658;Dbxref=NCBI_GP:EFB89843.1;Name=EFB89843.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_1658;partial=true;product=ankyrin repeat protein;protein_id=EFB89843.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000118.1 Genbank gene 508 624 . + . ID=gene-HMPREF7215_1659;Name=HMPREF7215_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1659 GCA_000177335.1|ADFP01000118.1 Genbank CDS 508 624 . + 0 ID=cds-EFB89844.1;Parent=gene-HMPREF7215_1659;Dbxref=NCBI_GP:EFB89844.1;Name=EFB89844.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1659;product=hypothetical protein;protein_id=EFB89844.1;transl_table=11 GCA_000177335.1|ADFP01000118.1 Genbank gene 713 1464 . + . ID=gene-HMPREF7215_1660;Name=HMPREF7215_1660;end_range=1464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1660;partial=true GCA_000177335.1|ADFP01000118.1 Genbank CDS 713 1464 . + 0 ID=cds-EFB89845.1;Parent=gene-HMPREF7215_1660;Dbxref=NCBI_GP:EFB89845.1;Name=EFB89845.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045;end_range=1464,.;gbkey=CDS;locus_tag=HMPREF7215_1660;partial=true;product=glycerate kinase;protein_id=EFB89845.1;transl_table=11 ##sequence-region ADFP01000117.1 1 13305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000117.1 Genbank region 1 13305 . + . ID=ADFP01000117.1:1..13305;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000117.1 Genbank gene 29 2128 . - . ID=gene-HMPREF7215_0919;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0919 GCA_000177335.1|ADFP01000117.1 Genbank CDS 29 2128 . - 0 ID=cds-EFB89846.1;Parent=gene-HMPREF7215_0919;Dbxref=NCBI_GP:EFB89846.1;Name=EFB89846.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF7215_0919;product=translation elongation factor G;protein_id=EFB89846.1;transl_table=11 GCA_000177335.1|ADFP01000117.1 Genbank gene 2149 2619 . - . ID=gene-HMPREF7215_0920;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0920 GCA_000177335.1|ADFP01000117.1 Genbank CDS 2149 2619 . - 0 ID=cds-EFB89847.1;Parent=gene-HMPREF7215_0920;Dbxref=NCBI_GP:EFB89847.1;Name=EFB89847.1;Note=identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029;gbkey=CDS;gene=rpsG;locus_tag=HMPREF7215_0920;product=ribosomal protein S7;protein_id=EFB89847.1;transl_table=11 GCA_000177335.1|ADFP01000117.1 Genbank gene 2640 3011 . - . ID=gene-HMPREF7215_0921;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=HMPREF7215_0921 GCA_000177335.1|ADFP01000117.1 Genbank CDS 2640 3011 . - 0 ID=cds-EFB89848.1;Parent=gene-HMPREF7215_0921;Dbxref=NCBI_GP:EFB89848.1;Name=EFB89848.1;Note=identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981;gbkey=CDS;gene=rpsL;locus_tag=HMPREF7215_0921;product=ribosomal protein S12;protein_id=EFB89848.1;transl_table=11 GCA_000177335.1|ADFP01000117.1 Genbank gene 3421 8553 . - . ID=gene-HMPREF7215_0922;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0922 GCA_000177335.1|ADFP01000117.1 Genbank CDS 3421 8553 . - 0 ID=cds-EFB89849.1;Parent=gene-HMPREF7215_0922;Dbxref=NCBI_GP:EFB89849.1;Name=EFB89849.1;Note=identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;locus_tag=HMPREF7215_0922;product=DNA-directed RNA polymerase%2C beta' subunit;protein_id=EFB89849.1;transl_table=11 GCA_000177335.1|ADFP01000117.1 Genbank gene 8669 12358 . - . ID=gene-HMPREF7215_0923;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0923 GCA_000177335.1|ADFP01000117.1 Genbank CDS 8669 12358 . - 0 ID=cds-EFB89850.1;Parent=gene-HMPREF7215_0923;Dbxref=NCBI_GP:EFB89850.1;Name=EFB89850.1;Note=identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013;gbkey=CDS;gene=rpoB;locus_tag=HMPREF7215_0923;product=DNA-directed RNA polymerase%2C beta subunit;protein_id=EFB89850.1;transl_table=11 GCA_000177335.1|ADFP01000117.1 Genbank gene 12605 12691 . - . ID=gene-HMPREF7215_0924;Name=HMPREF7215_0924;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0924 GCA_000177335.1|ADFP01000117.1 Genbank tRNA 12605 12691 . - . ID=rna-HMPREF7215_0924;Parent=gene-HMPREF7215_0924;gbkey=tRNA;locus_tag=HMPREF7215_0924;product=tRNA-Leu GCA_000177335.1|ADFP01000117.1 Genbank exon 12605 12691 . - . ID=exon-HMPREF7215_0924-1;Parent=rna-HMPREF7215_0924;gbkey=tRNA;locus_tag=HMPREF7215_0924;product=tRNA-Leu GCA_000177335.1|ADFP01000117.1 Genbank gene 12776 13305 . - . ID=gene-HMPREF7215_0925;Name=HMPREF7215_0925;end_range=13305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0925;partial=true GCA_000177335.1|ADFP01000117.1 Genbank CDS 12776 13305 . - 2 ID=cds-EFB89851.1;Parent=gene-HMPREF7215_0925;Dbxref=NCBI_GP:EFB89851.1;Name=EFB89851.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03481;end_range=13305,.;gbkey=CDS;locus_tag=HMPREF7215_0925;partial=true;product=SUA5 domain protein;protein_id=EFB89851.1;transl_table=11 ##sequence-region ADFP01000116.1 1 16793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000116.1 Genbank region 1 16793 . + . ID=ADFP01000116.1:1..16793;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000116.1 Genbank gene 90 638 . - . ID=gene-HMPREF7215_2724;Name=HMPREF7215_2724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2724 GCA_000177335.1|ADFP01000116.1 Genbank CDS 90 638 . - 0 ID=cds-EFB89852.1;Parent=gene-HMPREF7215_2724;Dbxref=NCBI_GP:EFB89852.1;Name=EFB89852.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=HMPREF7215_2724;product=flavin reductase;protein_id=EFB89852.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 672 1244 . - . ID=gene-HMPREF7215_2725;Name=HMPREF7215_2725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2725 GCA_000177335.1|ADFP01000116.1 Genbank CDS 672 1244 . - 0 ID=cds-EFB89853.1;Parent=gene-HMPREF7215_2725;Dbxref=NCBI_GP:EFB89853.1;Name=EFB89853.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;locus_tag=HMPREF7215_2725;product=ferritin-like protein;protein_id=EFB89853.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 1468 2124 . + . ID=gene-HMPREF7215_2726;Name=HMPREF7215_2726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2726 GCA_000177335.1|ADFP01000116.1 Genbank CDS 1468 2124 . + 0 ID=cds-EFB89854.1;Parent=gene-HMPREF7215_2726;Dbxref=NCBI_GP:EFB89854.1;Name=EFB89854.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_2726;product=cupin domain protein;protein_id=EFB89854.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 2150 2833 . + . ID=gene-HMPREF7215_2727;Name=HMPREF7215_2727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2727 GCA_000177335.1|ADFP01000116.1 Genbank CDS 2150 2833 . + 0 ID=cds-EFB89855.1;Parent=gene-HMPREF7215_2727;Dbxref=NCBI_GP:EFB89855.1;Name=EFB89855.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2727;product=hypothetical protein;protein_id=EFB89855.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 2880 4085 . + . ID=gene-HMPREF7215_2728;Name=HMPREF7215_2728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2728 GCA_000177335.1|ADFP01000116.1 Genbank CDS 2880 4085 . + 0 ID=cds-EFB89856.1;Parent=gene-HMPREF7215_2728;Dbxref=NCBI_GP:EFB89856.1;Name=EFB89856.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF7215_2728;product=metallo-beta-lactamase domain protein;protein_id=EFB89856.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 4060 4320 . + . ID=gene-HMPREF7215_2729;Name=HMPREF7215_2729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2729 GCA_000177335.1|ADFP01000116.1 Genbank CDS 4060 4320 . + 0 ID=cds-EFB89857.1;Parent=gene-HMPREF7215_2729;Dbxref=NCBI_GP:EFB89857.1;Name=EFB89857.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_2729;product=4Fe-4S binding domain protein;protein_id=EFB89857.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 4323 5957 . + . ID=gene-HMPREF7215_2731;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=HMPREF7215_2731 GCA_000177335.1|ADFP01000116.1 Genbank CDS 4323 5957 . + 0 ID=cds-EFB89858.1;Parent=gene-HMPREF7215_2731;Dbxref=NCBI_GP:EFB89858.1;Name=EFB89858.1;Note=identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703;gbkey=CDS;gene=hcp;locus_tag=HMPREF7215_2731;product=hydroxylamine reductase;protein_id=EFB89858.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 5954 6103 . - . ID=gene-HMPREF7215_2730;Name=HMPREF7215_2730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2730 GCA_000177335.1|ADFP01000116.1 Genbank CDS 5954 6103 . - 0 ID=cds-EFB89859.1;Parent=gene-HMPREF7215_2730;Dbxref=NCBI_GP:EFB89859.1;Name=EFB89859.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2730;product=hypothetical protein;protein_id=EFB89859.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 6325 7449 . + . ID=gene-HMPREF7215_2732;Name=HMPREF7215_2732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2732 GCA_000177335.1|ADFP01000116.1 Genbank CDS 6325 7449 . + 0 ID=cds-EFB89860.1;Parent=gene-HMPREF7215_2732;Dbxref=NCBI_GP:EFB89860.1;Name=EFB89860.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF00248;gbkey=CDS;locus_tag=HMPREF7215_2732;product=4Fe-4S binding domain protein;protein_id=EFB89860.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 7543 7618 . + . ID=gene-HMPREF7215_2733;Name=HMPREF7215_2733;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2733 GCA_000177335.1|ADFP01000116.1 Genbank tRNA 7543 7618 . + . ID=rna-HMPREF7215_2733;Parent=gene-HMPREF7215_2733;gbkey=tRNA;locus_tag=HMPREF7215_2733;product=tRNA-Gly GCA_000177335.1|ADFP01000116.1 Genbank exon 7543 7618 . + . ID=exon-HMPREF7215_2733-1;Parent=rna-HMPREF7215_2733;gbkey=tRNA;locus_tag=HMPREF7215_2733;product=tRNA-Gly GCA_000177335.1|ADFP01000116.1 Genbank gene 8098 8430 . + . ID=gene-HMPREF7215_2734;Name=HMPREF7215_2734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2734 GCA_000177335.1|ADFP01000116.1 Genbank CDS 8098 8430 . + 0 ID=cds-EFB89861.1;Parent=gene-HMPREF7215_2734;Dbxref=NCBI_GP:EFB89861.1;Name=EFB89861.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2734;product=hypothetical protein;protein_id=EFB89861.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 8411 10420 . + . ID=gene-HMPREF7215_2735;Name=HMPREF7215_2735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2735 GCA_000177335.1|ADFP01000116.1 Genbank CDS 8411 10420 . + 0 ID=cds-EFB89862.1;Parent=gene-HMPREF7215_2735;Dbxref=NCBI_GP:EFB89862.1;Name=EFB89862.1;Note=identified by match to protein family HMM PF01496;gbkey=CDS;locus_tag=HMPREF7215_2735;product=V-type ATPase 116kDa subunit family protein;protein_id=EFB89862.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 10470 10946 . + . ID=gene-HMPREF7215_2736;Name=HMPREF7215_2736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2736 GCA_000177335.1|ADFP01000116.1 Genbank CDS 10470 10946 . + 0 ID=cds-EFB89863.1;Parent=gene-HMPREF7215_2736;Dbxref=NCBI_GP:EFB89863.1;Name=EFB89863.1;Note=identified by match to protein family HMM PF00137;gbkey=CDS;locus_tag=HMPREF7215_2736;product=V-type sodium ATPase%2C K subunit;protein_id=EFB89863.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 10961 11545 . + . ID=gene-HMPREF7215_2737;Name=HMPREF7215_2737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2737 GCA_000177335.1|ADFP01000116.1 Genbank CDS 10961 11545 . + 0 ID=cds-EFB89864.1;Parent=gene-HMPREF7215_2737;Dbxref=NCBI_GP:EFB89864.1;Name=EFB89864.1;Note=identified by match to protein family HMM PF01991;gbkey=CDS;locus_tag=HMPREF7215_2737;product=putative ATP synthase%2C subunit E;protein_id=EFB89864.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 11552 12571 . + . ID=gene-HMPREF7215_2738;Name=HMPREF7215_2738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2738 GCA_000177335.1|ADFP01000116.1 Genbank CDS 11552 12571 . + 0 ID=cds-EFB89865.1;Parent=gene-HMPREF7215_2738;Dbxref=NCBI_GP:EFB89865.1;Name=EFB89865.1;Note=identified by match to protein family HMM PF01992;gbkey=CDS;locus_tag=HMPREF7215_2738;product=ATP synthase%2C subunit C;protein_id=EFB89865.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 12561 12896 . + . ID=gene-HMPREF7215_2739;Name=HMPREF7215_2739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2739 GCA_000177335.1|ADFP01000116.1 Genbank CDS 12561 12896 . + 0 ID=cds-EFB89866.1;Parent=gene-HMPREF7215_2739;Dbxref=NCBI_GP:EFB89866.1;Name=EFB89866.1;Note=identified by match to protein family HMM PF01990;gbkey=CDS;locus_tag=HMPREF7215_2739;product=ATP synthase%2C subunit F;protein_id=EFB89866.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 12921 14705 . + . ID=gene-HMPREF7215_2740;Name=HMPREF7215_2740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2740 GCA_000177335.1|ADFP01000116.1 Genbank CDS 12921 14705 . + 0 ID=cds-EFB89867.1;Parent=gene-HMPREF7215_2740;Dbxref=NCBI_GP:EFB89867.1;Name=EFB89867.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874;gbkey=CDS;locus_tag=HMPREF7215_2740;product=ATP synthase ab domain protein;protein_id=EFB89867.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 14705 16117 . + . ID=gene-HMPREF7215_2741;Name=HMPREF7215_2741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2741 GCA_000177335.1|ADFP01000116.1 Genbank CDS 14705 16117 . + 0 ID=cds-EFB89868.1;Parent=gene-HMPREF7215_2741;Dbxref=NCBI_GP:EFB89868.1;Name=EFB89868.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378;gbkey=CDS;locus_tag=HMPREF7215_2741;product=ATP synthase ab domain protein;protein_id=EFB89868.1;transl_table=11 GCA_000177335.1|ADFP01000116.1 Genbank gene 16133 16756 . + . ID=gene-HMPREF7215_2742;Name=HMPREF7215_2742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2742 GCA_000177335.1|ADFP01000116.1 Genbank CDS 16133 16756 . + 0 ID=cds-EFB89869.1;Parent=gene-HMPREF7215_2742;Dbxref=NCBI_GP:EFB89869.1;Name=EFB89869.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01813%3B match to protein family HMM TIGR00309;gbkey=CDS;locus_tag=HMPREF7215_2742;product=V-type ATPase%2C D subunit;protein_id=EFB89869.1;transl_table=11 ##sequence-region ADFP01000115.1 1 5569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000115.1 Genbank region 1 5569 . + . ID=ADFP01000115.1:1..5569;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000115.1 Genbank gene 1 1143 . + . ID=gene-HMPREF7215_2376;Name=cbiT;gbkey=Gene;gene=cbiT;gene_biotype=protein_coding;locus_tag=HMPREF7215_2376;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000115.1 Genbank CDS 1 1143 . + 0 ID=cds-EFB89870.1;Parent=gene-HMPREF7215_2376;Dbxref=NCBI_GP:EFB89870.1;Name=EFB89870.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR02467%3B match to protein family HMM TIGR02469;gbkey=CDS;gene=cbiT;locus_tag=HMPREF7215_2376;partial=true;product=precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit;protein_id=EFB89870.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000115.1 Genbank gene 1145 1900 . + . ID=gene-HMPREF7215_2377;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=HMPREF7215_2377 GCA_000177335.1|ADFP01000115.1 Genbank CDS 1145 1900 . + 0 ID=cds-EFB89871.1;Parent=gene-HMPREF7215_2377;Dbxref=NCBI_GP:EFB89871.1;Name=EFB89871.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01465;gbkey=CDS;gene=cobM;locus_tag=HMPREF7215_2377;product=precorrin-4 C(11)-methyltransferase;protein_id=EFB89871.1;transl_table=11 GCA_000177335.1|ADFP01000115.1 Genbank gene 1897 2898 . + . ID=gene-HMPREF7215_2378;Name=HMPREF7215_2378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2378 GCA_000177335.1|ADFP01000115.1 Genbank CDS 1897 2898 . + 0 ID=cds-EFB89872.1;Parent=gene-HMPREF7215_2378;Dbxref=NCBI_GP:EFB89872.1;Name=EFB89872.1;Note=identified by match to protein family HMM PF01890;gbkey=CDS;locus_tag=HMPREF7215_2378;product=CbiG;protein_id=EFB89872.1;transl_table=11 GCA_000177335.1|ADFP01000115.1 Genbank gene 2895 3617 . + . ID=gene-HMPREF7215_2379;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2379 GCA_000177335.1|ADFP01000115.1 Genbank CDS 2895 3617 . + 0 ID=cds-EFB89873.1;Parent=gene-HMPREF7215_2379;Dbxref=NCBI_GP:EFB89873.1;Name=EFB89873.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01466;gbkey=CDS;gene=cobJ;locus_tag=HMPREF7215_2379;product=precorrin-3B C(17)-methyltransferase;protein_id=EFB89873.1;transl_table=11 GCA_000177335.1|ADFP01000115.1 Genbank gene 3614 4837 . + . ID=gene-HMPREF7215_2380;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=HMPREF7215_2380 GCA_000177335.1|ADFP01000115.1 Genbank CDS 3614 4837 . + 0 ID=cds-EFB89874.1;Parent=gene-HMPREF7215_2380;Dbxref=NCBI_GP:EFB89874.1;Name=EFB89874.1;Note=identified by match to protein family HMM PF02571%3B match to protein family HMM TIGR00715%3B match to protein family HMM TIGR01470;gbkey=CDS;gene=cobK;locus_tag=HMPREF7215_2380;product=precorrin-6A reductase;protein_id=EFB89874.1;transl_table=11 GCA_000177335.1|ADFP01000115.1 Genbank gene 4834 5569 . + . ID=gene-HMPREF7215_2381;Name=hemC;end_range=5569,.;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2381;partial=true GCA_000177335.1|ADFP01000115.1 Genbank CDS 4834 5569 . + 0 ID=cds-EFB89875.1;Parent=gene-HMPREF7215_2381;Dbxref=NCBI_GP:EFB89875.1;Name=EFB89875.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01379%3B match to protein family HMM TIGR00212;end_range=5569,.;gbkey=CDS;gene=hemC;locus_tag=HMPREF7215_2381;partial=true;product=hydroxymethylbilane synthase;protein_id=EFB89875.1;transl_table=11 ##sequence-region ADFP01000114.1 1 6063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000114.1 Genbank region 1 6063 . + . ID=ADFP01000114.1:1..6063;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000114.1 Genbank gene 1 896 . - . ID=gene-HMPREF7215_0736;Name=HMPREF7215_0736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0736;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000114.1 Genbank CDS 1 896 . - 0 ID=cds-EFB89876.1;Parent=gene-HMPREF7215_0736;Dbxref=NCBI_GP:EFB89876.1;Name=EFB89876.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0736;partial=true;product=putative exonuclease subunit SbcC;protein_id=EFB89876.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000114.1 Genbank gene 893 2107 . - . ID=gene-HMPREF7215_0737;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0737 GCA_000177335.1|ADFP01000114.1 Genbank CDS 893 2107 . - 0 ID=cds-EFB89877.1;Parent=gene-HMPREF7215_0737;Dbxref=NCBI_GP:EFB89877.1;Name=EFB89877.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619;gbkey=CDS;gene=sbcD;locus_tag=HMPREF7215_0737;product=exonuclease SbcCD%2C D subunit;protein_id=EFB89877.1;transl_table=11 GCA_000177335.1|ADFP01000114.1 Genbank gene 2223 3017 . + . ID=gene-HMPREF7215_0738;Name=HMPREF7215_0738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0738 GCA_000177335.1|ADFP01000114.1 Genbank CDS 2223 3017 . + 0 ID=cds-EFB89878.1;Parent=gene-HMPREF7215_0738;Dbxref=NCBI_GP:EFB89878.1;Name=EFB89878.1;Note=identified by match to protein family HMM PF03747;gbkey=CDS;locus_tag=HMPREF7215_0738;product=ADP-ribosylglycohydrolase;protein_id=EFB89878.1;transl_table=11 GCA_000177335.1|ADFP01000114.1 Genbank gene 3269 5410 . + . ID=gene-HMPREF7215_0739;Name=HMPREF7215_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0739 GCA_000177335.1|ADFP01000114.1 Genbank CDS 3269 5410 . + 0 ID=cds-EFB89879.1;Parent=gene-HMPREF7215_0739;Dbxref=NCBI_GP:EFB89879.1;Name=EFB89879.1;Note=identified by match to protein family HMM PF01276%3B match to protein family HMM PF03711;gbkey=CDS;locus_tag=HMPREF7215_0739;product=Orn/Lys/Arg decarboxylase%2C major domain protein;protein_id=EFB89879.1;transl_table=11 GCA_000177335.1|ADFP01000114.1 Genbank gene 5468 5935 . + . ID=gene-HMPREF7215_0740;Name=HMPREF7215_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0740 GCA_000177335.1|ADFP01000114.1 Genbank CDS 5468 5935 . + 0 ID=cds-EFB89880.1;Parent=gene-HMPREF7215_0740;Dbxref=NCBI_GP:EFB89880.1;Name=EFB89880.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0740;product=hypothetical protein;protein_id=EFB89880.1;transl_table=11 GCA_000177335.1|ADFP01000114.1 Genbank gene 5932 6063 . + . ID=gene-HMPREF7215_0741;Name=HMPREF7215_0741;end_range=6063,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0741;partial=true GCA_000177335.1|ADFP01000114.1 Genbank CDS 5932 6063 . + 0 ID=cds-EFB89881.1;Parent=gene-HMPREF7215_0741;Dbxref=NCBI_GP:EFB89881.1;Name=EFB89881.1;Note=identified by glimmer%3B putative;end_range=6063,.;gbkey=CDS;locus_tag=HMPREF7215_0741;partial=true;product=hypothetical protein;protein_id=EFB89881.1;transl_table=11 ##sequence-region ADFP01000113.1 1 15425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000113.1 Genbank region 1 15425 . + . ID=ADFP01000113.1:1..15425;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000113.1 Genbank gene 47 1171 . + . ID=gene-HMPREF7215_2506;Name=HMPREF7215_2506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2506 GCA_000177335.1|ADFP01000113.1 Genbank CDS 47 1171 . + 0 ID=cds-EFB89882.1;Parent=gene-HMPREF7215_2506;Dbxref=NCBI_GP:EFB89882.1;Name=EFB89882.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2506;product=hypothetical protein;protein_id=EFB89882.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 1172 1714 . + . ID=gene-HMPREF7215_2507;Name=HMPREF7215_2507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2507 GCA_000177335.1|ADFP01000113.1 Genbank CDS 1172 1714 . + 0 ID=cds-EFB89883.1;Parent=gene-HMPREF7215_2507;Dbxref=NCBI_GP:EFB89883.1;Name=EFB89883.1;gbkey=CDS;locus_tag=HMPREF7215_2507;product=hypothetical protein;protein_id=EFB89883.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 1711 2688 . + . ID=gene-HMPREF7215_2508;Name=HMPREF7215_2508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2508 GCA_000177335.1|ADFP01000113.1 Genbank CDS 1711 2688 . + 0 ID=cds-EFB89884.1;Parent=gene-HMPREF7215_2508;Dbxref=NCBI_GP:EFB89884.1;Name=EFB89884.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2508;product=ABC transporter%2C permease protein;protein_id=EFB89884.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 2685 3938 . + . ID=gene-HMPREF7215_2509;Name=HMPREF7215_2509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2509 GCA_000177335.1|ADFP01000113.1 Genbank CDS 2685 3938 . + 0 ID=cds-EFB89885.1;Parent=gene-HMPREF7215_2509;Dbxref=NCBI_GP:EFB89885.1;Name=EFB89885.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2509;product=ABC transporter%2C permease protein;protein_id=EFB89885.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 3925 4680 . + . ID=gene-HMPREF7215_2510;Name=HMPREF7215_2510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2510 GCA_000177335.1|ADFP01000113.1 Genbank CDS 3925 4680 . + 0 ID=cds-EFB89886.1;Parent=gene-HMPREF7215_2510;Dbxref=NCBI_GP:EFB89886.1;Name=EFB89886.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2510;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89886.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 4693 5493 . + . ID=gene-HMPREF7215_2511;Name=HMPREF7215_2511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2511 GCA_000177335.1|ADFP01000113.1 Genbank CDS 4693 5493 . + 0 ID=cds-EFB89887.1;Parent=gene-HMPREF7215_2511;Dbxref=NCBI_GP:EFB89887.1;Name=EFB89887.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2511;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89887.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 5566 5727 . - . ID=gene-HMPREF7215_2512;Name=HMPREF7215_2512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2512 GCA_000177335.1|ADFP01000113.1 Genbank CDS 5566 5727 . - 0 ID=cds-EFB89888.1;Parent=gene-HMPREF7215_2512;Dbxref=NCBI_GP:EFB89888.1;Name=EFB89888.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2512;product=hypothetical protein;protein_id=EFB89888.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 5717 7150 . + . ID=gene-HMPREF7215_2513;Name=HMPREF7215_2513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2513 GCA_000177335.1|ADFP01000113.1 Genbank CDS 5717 7150 . + 0 ID=cds-EFB89889.1;Parent=gene-HMPREF7215_2513;Dbxref=NCBI_GP:EFB89889.1;Name=EFB89889.1;gbkey=CDS;locus_tag=HMPREF7215_2513;product=hypothetical protein;protein_id=EFB89889.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 7235 8044 . + . ID=gene-HMPREF7215_2514;Name=HMPREF7215_2514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2514 GCA_000177335.1|ADFP01000113.1 Genbank CDS 7235 8044 . + 0 ID=cds-EFB89890.1;Parent=gene-HMPREF7215_2514;Dbxref=NCBI_GP:EFB89890.1;Name=EFB89890.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2514;product=hypothetical protein;protein_id=EFB89890.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 8228 8392 . + . ID=gene-HMPREF7215_2515;Name=HMPREF7215_2515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2515 GCA_000177335.1|ADFP01000113.1 Genbank CDS 8228 8392 . + 0 ID=cds-EFB89891.1;Parent=gene-HMPREF7215_2515;Dbxref=NCBI_GP:EFB89891.1;Name=EFB89891.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2515;product=hypothetical protein;protein_id=EFB89891.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 8433 9569 . + . ID=gene-HMPREF7215_2516;Name=HMPREF7215_2516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2516 GCA_000177335.1|ADFP01000113.1 Genbank CDS 8433 9569 . + 0 ID=cds-EFB89892.1;Parent=gene-HMPREF7215_2516;Dbxref=NCBI_GP:EFB89892.1;Name=EFB89892.1;gbkey=CDS;locus_tag=HMPREF7215_2516;product=hypothetical protein;protein_id=EFB89892.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 9707 10486 . - . ID=gene-HMPREF7215_2517;Name=HMPREF7215_2517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2517 GCA_000177335.1|ADFP01000113.1 Genbank CDS 9707 10486 . - 0 ID=cds-EFB89893.1;Parent=gene-HMPREF7215_2517;Dbxref=NCBI_GP:EFB89893.1;Name=EFB89893.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2517;product=hypothetical protein;protein_id=EFB89893.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 10539 11303 . - . ID=gene-HMPREF7215_2518;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2518 GCA_000177335.1|ADFP01000113.1 Genbank CDS 10539 11303 . - 0 ID=cds-EFB89894.1;Parent=gene-HMPREF7215_2518;Dbxref=NCBI_GP:EFB89894.1;Name=EFB89894.1;Note=identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473;gbkey=CDS;gene=pssA;locus_tag=HMPREF7215_2518;product=CDP-diacylglycerol-serine O-phosphatidyltransferase;protein_id=EFB89894.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 11335 11952 . - . ID=gene-HMPREF7215_2519;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=HMPREF7215_2519 GCA_000177335.1|ADFP01000113.1 Genbank CDS 11335 11952 . - 0 ID=cds-EFB89895.1;Parent=gene-HMPREF7215_2519;Dbxref=NCBI_GP:EFB89895.1;Name=EFB89895.1;Note=identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00164;gbkey=CDS;gene=psd;locus_tag=HMPREF7215_2519;product=phosphatidylserine decarboxylase;protein_id=EFB89895.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 11956 14571 . - . ID=gene-HMPREF7215_2520;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2520 GCA_000177335.1|ADFP01000113.1 Genbank CDS 11956 14571 . - 0 ID=cds-EFB89896.1;Parent=gene-HMPREF7215_2520;Dbxref=NCBI_GP:EFB89896.1;Name=EFB89896.1;Note=identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA;locus_tag=HMPREF7215_2520;product=DNA gyrase%2C A subunit;protein_id=EFB89896.1;transl_table=11 GCA_000177335.1|ADFP01000113.1 Genbank gene 14730 15425 . + . ID=gene-HMPREF7215_2521;Name=HMPREF7215_2521;end_range=15425,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2521;partial=true GCA_000177335.1|ADFP01000113.1 Genbank CDS 14730 15425 . + 0 ID=cds-EFB89897.1;Parent=gene-HMPREF7215_2521;Dbxref=NCBI_GP:EFB89897.1;Name=EFB89897.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04474;end_range=15425,.;gbkey=CDS;locus_tag=HMPREF7215_2521;partial=true;product=hypothetical protein;protein_id=EFB89897.1;transl_table=11 ##sequence-region ADFP01000112.1 1 4587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000112.1 Genbank region 1 4587 . + . ID=ADFP01000112.1:1..4587;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000112.1 Genbank gene 108 2240 . - . ID=gene-HMPREF7215_0699;Name=HMPREF7215_0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0699 GCA_000177335.1|ADFP01000112.1 Genbank CDS 108 2240 . - 0 ID=cds-EFB89898.1;Parent=gene-HMPREF7215_0699;Dbxref=NCBI_GP:EFB89898.1;Name=EFB89898.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR01243;gbkey=CDS;locus_tag=HMPREF7215_0699;product=AAA family ATPase%2C CDC48 subfamily;protein_id=EFB89898.1;transl_table=11 GCA_000177335.1|ADFP01000112.1 Genbank gene 2193 2360 . + . ID=gene-HMPREF7215_0701;Name=HMPREF7215_0701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0701 GCA_000177335.1|ADFP01000112.1 Genbank CDS 2193 2360 . + 0 ID=cds-EFB89899.1;Parent=gene-HMPREF7215_0701;Dbxref=NCBI_GP:EFB89899.1;Name=EFB89899.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0701;product=hypothetical protein;protein_id=EFB89899.1;transl_table=11 GCA_000177335.1|ADFP01000112.1 Genbank gene 2311 2430 . - . ID=gene-HMPREF7215_0700;Name=HMPREF7215_0700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0700 GCA_000177335.1|ADFP01000112.1 Genbank CDS 2311 2430 . - 0 ID=cds-EFB89900.1;Parent=gene-HMPREF7215_0700;Dbxref=NCBI_GP:EFB89900.1;Name=EFB89900.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0700;product=hypothetical protein;protein_id=EFB89900.1;transl_table=11 GCA_000177335.1|ADFP01000112.1 Genbank gene 2429 3475 . + . ID=gene-HMPREF7215_0702;Name=HMPREF7215_0702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0702 GCA_000177335.1|ADFP01000112.1 Genbank CDS 2429 3475 . + 0 ID=cds-EFB89901.1;Parent=gene-HMPREF7215_0702;Dbxref=NCBI_GP:EFB89901.1;Name=EFB89901.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;locus_tag=HMPREF7215_0702;product=HDIG domain protein;protein_id=EFB89901.1;transl_table=11 GCA_000177335.1|ADFP01000112.1 Genbank gene 3478 4425 . + . ID=gene-HMPREF7215_0703;Name=HMPREF7215_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0703 GCA_000177335.1|ADFP01000112.1 Genbank CDS 3478 4425 . + 0 ID=cds-EFB89902.1;Parent=gene-HMPREF7215_0703;Dbxref=NCBI_GP:EFB89902.1;Name=EFB89902.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF7215_0703;product=pseudouridine synthase%2C RluA family;protein_id=EFB89902.1;transl_table=11 GCA_000177335.1|ADFP01000112.1 Genbank gene 4441 4587 . + . ID=gene-HMPREF7215_0704;Name=HMPREF7215_0704;end_range=4587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0704;partial=true GCA_000177335.1|ADFP01000112.1 Genbank CDS 4441 4587 . + 0 ID=cds-EFB89903.1;Parent=gene-HMPREF7215_0704;Dbxref=NCBI_GP:EFB89903.1;Name=EFB89903.1;Note=identified by glimmer%3B putative;end_range=4587,.;gbkey=CDS;locus_tag=HMPREF7215_0704;partial=true;product=hypothetical protein;protein_id=EFB89903.1;transl_table=11 ##sequence-region ADFP01000111.1 1 2707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000111.1 Genbank region 1 2707 . + . ID=ADFP01000111.1:1..2707;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000111.1 Genbank gene 1 169 . - . ID=gene-HMPREF7215_1889;Name=HMPREF7215_1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1889;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000111.1 Genbank CDS 1 169 . - 0 ID=cds-EFB89904.1;Parent=gene-HMPREF7215_1889;Dbxref=NCBI_GP:EFB89904.1;Name=EFB89904.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1889;partial=true;product=hypothetical protein;protein_id=EFB89904.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000111.1 Genbank gene 308 1117 . - . ID=gene-HMPREF7215_1890;Name=HMPREF7215_1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1890 GCA_000177335.1|ADFP01000111.1 Genbank CDS 308 1117 . - 0 ID=cds-EFB89905.1;Parent=gene-HMPREF7215_1890;Dbxref=NCBI_GP:EFB89905.1;Name=EFB89905.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_1890;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB89905.1;transl_table=11 GCA_000177335.1|ADFP01000111.1 Genbank gene 1166 1831 . - . ID=gene-HMPREF7215_1891;Name=HMPREF7215_1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1891 GCA_000177335.1|ADFP01000111.1 Genbank CDS 1166 1831 . - 0 ID=cds-EFB89906.1;Parent=gene-HMPREF7215_1891;Dbxref=NCBI_GP:EFB89906.1;Name=EFB89906.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_1891;product=ABC transporter%2C permease protein;protein_id=EFB89906.1;transl_table=11 GCA_000177335.1|ADFP01000111.1 Genbank gene 1846 2583 . - . ID=gene-HMPREF7215_1892;Name=HMPREF7215_1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1892 GCA_000177335.1|ADFP01000111.1 Genbank CDS 1846 2583 . - 0 ID=cds-EFB89907.1;Parent=gene-HMPREF7215_1892;Dbxref=NCBI_GP:EFB89907.1;Name=EFB89907.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1892;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89907.1;transl_table=11 ##sequence-region ADFP01000110.1 1 3649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000110.1 Genbank region 1 3649 . + . ID=ADFP01000110.1:1..3649;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000110.1 Genbank gene 1 390 . - . ID=gene-HMPREF7215_0744;Name=HMPREF7215_0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0744;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000110.1 Genbank CDS 1 390 . - 0 ID=cds-EFB89908.1;Parent=gene-HMPREF7215_0744;Dbxref=NCBI_GP:EFB89908.1;Name=EFB89908.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0744;partial=true;product=hypothetical protein;protein_id=EFB89908.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000110.1 Genbank gene 542 2359 . - . ID=gene-HMPREF7215_0745;Name=HMPREF7215_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0745 GCA_000177335.1|ADFP01000110.1 Genbank CDS 542 2359 . - 0 ID=cds-EFB89909.1;Parent=gene-HMPREF7215_0745;Dbxref=NCBI_GP:EFB89909.1;Name=EFB89909.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0745;product=hypothetical protein;protein_id=EFB89909.1;transl_table=11 GCA_000177335.1|ADFP01000110.1 Genbank gene 2440 2598 . - . ID=gene-HMPREF7215_0746;Name=HMPREF7215_0746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0746 GCA_000177335.1|ADFP01000110.1 Genbank CDS 2440 2598 . - 0 ID=cds-EFB89910.1;Parent=gene-HMPREF7215_0746;Dbxref=NCBI_GP:EFB89910.1;Name=EFB89910.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0746;product=hypothetical protein;protein_id=EFB89910.1;transl_table=11 GCA_000177335.1|ADFP01000110.1 Genbank gene 2623 3384 . + . ID=gene-HMPREF7215_0747;Name=HMPREF7215_0747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0747 GCA_000177335.1|ADFP01000110.1 Genbank CDS 2623 3384 . + 0 ID=cds-EFB89911.1;Parent=gene-HMPREF7215_0747;Dbxref=NCBI_GP:EFB89911.1;Name=EFB89911.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0747;product=hypothetical protein;protein_id=EFB89911.1;transl_table=11 GCA_000177335.1|ADFP01000110.1 Genbank gene 3506 3649 . - . ID=gene-HMPREF7215_0748;Name=HMPREF7215_0748;end_range=3649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0748;partial=true GCA_000177335.1|ADFP01000110.1 Genbank CDS 3506 3649 . - 0 ID=cds-EFB89912.1;Parent=gene-HMPREF7215_0748;Dbxref=NCBI_GP:EFB89912.1;Name=EFB89912.1;Note=identified by glimmer%3B putative;end_range=3649,.;gbkey=CDS;locus_tag=HMPREF7215_0748;partial=true;product=hypothetical protein;protein_id=EFB89912.1;transl_table=11 ##sequence-region ADFP01000109.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000109.1 Genbank region 1 509 . + . ID=ADFP01000109.1:1..509;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000108.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000108.1 Genbank region 1 509 . + . ID=ADFP01000108.1:1..509;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000108.1 Genbank gene 1 387 . - . ID=gene-HMPREF7215_2321;Name=HMPREF7215_2321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2321;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000108.1 Genbank CDS 1 387 . - 0 ID=cds-EFB89913.1;Parent=gene-HMPREF7215_2321;Dbxref=NCBI_GP:EFB89913.1;Name=EFB89913.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF7215_2321;partial=true;product=hypothetical protein;protein_id=EFB89913.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000107.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000107.1 Genbank region 1 1203 . + . ID=ADFP01000107.1:1..1203;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000107.1 Genbank gene 4 1203 . + . ID=gene-HMPREF7215_1674;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF7215_1674 GCA_000177335.1|ADFP01000107.1 Genbank CDS 4 1203 . + 0 ID=cds-EFB89914.1;Parent=gene-HMPREF7215_1674;Dbxref=NCBI_GP:EFB89914.1;Name=EFB89914.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=HMPREF7215_1674;product=translation elongation factor Tu;protein_id=EFB89914.1;transl_table=11 ##sequence-region ADFP01000106.1 1 7990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000106.1 Genbank region 1 7990 . + . ID=ADFP01000106.1:1..7990;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000106.1 Genbank gene 1 1035 . + . ID=gene-HMPREF7215_2786;Name=HMPREF7215_2786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2786;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000106.1 Genbank CDS 1 1035 . + 0 ID=cds-EFB89915.1;Parent=gene-HMPREF7215_2786;Dbxref=NCBI_GP:EFB89915.1;Name=EFB89915.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2786;partial=true;product=hypothetical protein;protein_id=EFB89915.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 1057 1401 . + . ID=gene-HMPREF7215_2787;Name=HMPREF7215_2787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2787 GCA_000177335.1|ADFP01000106.1 Genbank CDS 1057 1401 . + 0 ID=cds-EFB89916.1;Parent=gene-HMPREF7215_2787;Dbxref=NCBI_GP:EFB89916.1;Name=EFB89916.1;gbkey=CDS;locus_tag=HMPREF7215_2787;product=hypothetical protein;protein_id=EFB89916.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 1414 1740 . + . ID=gene-HMPREF7215_2788;Name=HMPREF7215_2788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2788 GCA_000177335.1|ADFP01000106.1 Genbank CDS 1414 1740 . + 0 ID=cds-EFB89917.1;Parent=gene-HMPREF7215_2788;Dbxref=NCBI_GP:EFB89917.1;Name=EFB89917.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2788;product=hypothetical protein;protein_id=EFB89917.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 1737 2342 . + . ID=gene-HMPREF7215_2789;Name=HMPREF7215_2789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2789 GCA_000177335.1|ADFP01000106.1 Genbank CDS 1737 2342 . + 0 ID=cds-EFB89918.1;Parent=gene-HMPREF7215_2789;Dbxref=NCBI_GP:EFB89918.1;Name=EFB89918.1;gbkey=CDS;locus_tag=HMPREF7215_2789;product=hypothetical protein;protein_id=EFB89918.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 2339 2953 . + . ID=gene-HMPREF7215_2790;Name=HMPREF7215_2790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2790 GCA_000177335.1|ADFP01000106.1 Genbank CDS 2339 2953 . + 0 ID=cds-EFB89919.1;Parent=gene-HMPREF7215_2790;Dbxref=NCBI_GP:EFB89919.1;Name=EFB89919.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2790;product=hypothetical protein;protein_id=EFB89919.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 2938 3183 . + . ID=gene-HMPREF7215_2791;Name=HMPREF7215_2791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2791 GCA_000177335.1|ADFP01000106.1 Genbank CDS 2938 3183 . + 0 ID=cds-EFB89920.1;Parent=gene-HMPREF7215_2791;Dbxref=NCBI_GP:EFB89920.1;Name=EFB89920.1;gbkey=CDS;locus_tag=HMPREF7215_2791;product=hypothetical protein;protein_id=EFB89920.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 3183 4664 . + . ID=gene-HMPREF7215_2792;Name=HMPREF7215_2792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2792 GCA_000177335.1|ADFP01000106.1 Genbank CDS 3183 4664 . + 0 ID=cds-EFB89921.1;Parent=gene-HMPREF7215_2792;Dbxref=NCBI_GP:EFB89921.1;Name=EFB89921.1;gbkey=CDS;locus_tag=HMPREF7215_2792;product=hypothetical protein;protein_id=EFB89921.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 4678 5193 . + . ID=gene-HMPREF7215_2793;Name=HMPREF7215_2793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2793 GCA_000177335.1|ADFP01000106.1 Genbank CDS 4678 5193 . + 0 ID=cds-EFB89922.1;Parent=gene-HMPREF7215_2793;Dbxref=NCBI_GP:EFB89922.1;Name=EFB89922.1;gbkey=CDS;locus_tag=HMPREF7215_2793;product=putative phage major tail tube protein;protein_id=EFB89922.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 5254 5739 . + . ID=gene-HMPREF7215_2794;Name=HMPREF7215_2794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2794 GCA_000177335.1|ADFP01000106.1 Genbank CDS 5254 5739 . + 0 ID=cds-EFB89923.1;Parent=gene-HMPREF7215_2794;Dbxref=NCBI_GP:EFB89923.1;Name=EFB89923.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2794;product=hypothetical protein;protein_id=EFB89923.1;transl_table=11 GCA_000177335.1|ADFP01000106.1 Genbank gene 5915 7990 . + . ID=gene-HMPREF7215_2795;Name=HMPREF7215_2795;end_range=7990,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2795;partial=true GCA_000177335.1|ADFP01000106.1 Genbank CDS 5915 7990 . + 0 ID=cds-EFB89924.1;Parent=gene-HMPREF7215_2795;Dbxref=NCBI_GP:EFB89924.1;Name=EFB89924.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01760;end_range=7990,.;gbkey=CDS;locus_tag=HMPREF7215_2795;partial=true;product=phage tail tape measure protein%2C TP901 family;protein_id=EFB89924.1;transl_table=11 ##sequence-region ADFP01000105.1 1 18039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000105.1 Genbank region 1 18039 . + . ID=ADFP01000105.1:1..18039;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000105.1 Genbank gene 49 789 . - . ID=gene-HMPREF7215_1591;Name=HMPREF7215_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1591 GCA_000177335.1|ADFP01000105.1 Genbank CDS 49 789 . - 0 ID=cds-EFB89925.1;Parent=gene-HMPREF7215_1591;Dbxref=NCBI_GP:EFB89925.1;Name=EFB89925.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF7215_1591;product=IclR helix-turn-helix domain protein;protein_id=EFB89925.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 934 1071 . - . ID=gene-HMPREF7215_1592;Name=HMPREF7215_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1592 GCA_000177335.1|ADFP01000105.1 Genbank CDS 934 1071 . - 0 ID=cds-EFB89926.1;Parent=gene-HMPREF7215_1592;Dbxref=NCBI_GP:EFB89926.1;Name=EFB89926.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1592;product=hypothetical protein;protein_id=EFB89926.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 1068 2015 . - . ID=gene-HMPREF7215_1593;Name=HMPREF7215_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1593 GCA_000177335.1|ADFP01000105.1 Genbank CDS 1068 2015 . - 0 ID=cds-EFB89927.1;Parent=gene-HMPREF7215_1593;Dbxref=NCBI_GP:EFB89927.1;Name=EFB89927.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1593;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89927.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 2016 3638 . - . ID=gene-HMPREF7215_1594;Name=HMPREF7215_1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1594 GCA_000177335.1|ADFP01000105.1 Genbank CDS 2016 3638 . - 0 ID=cds-EFB89928.1;Parent=gene-HMPREF7215_1594;Dbxref=NCBI_GP:EFB89928.1;Name=EFB89928.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1594;product=ABC transporter%2C permease protein;protein_id=EFB89928.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 3625 4617 . - . ID=gene-HMPREF7215_1595;Name=HMPREF7215_1595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1595 GCA_000177335.1|ADFP01000105.1 Genbank CDS 3625 4617 . - 0 ID=cds-EFB89929.1;Parent=gene-HMPREF7215_1595;Dbxref=NCBI_GP:EFB89929.1;Name=EFB89929.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=HMPREF7215_1595;product=ABC transporter%2C solute-binding protein;protein_id=EFB89929.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 4672 5322 . - . ID=gene-HMPREF7215_1596;Name=HMPREF7215_1596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1596 GCA_000177335.1|ADFP01000105.1 Genbank CDS 4672 5322 . - 0 ID=cds-EFB89930.1;Parent=gene-HMPREF7215_1596;Dbxref=NCBI_GP:EFB89930.1;Name=EFB89930.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;locus_tag=HMPREF7215_1596;product=PHP domain protein;protein_id=EFB89930.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 5341 5550 . - . ID=gene-HMPREF7215_1597;Name=HMPREF7215_1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1597 GCA_000177335.1|ADFP01000105.1 Genbank CDS 5341 5550 . - 0 ID=cds-EFB89931.1;Parent=gene-HMPREF7215_1597;Dbxref=NCBI_GP:EFB89931.1;Name=EFB89931.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1597;product=hypothetical protein;protein_id=EFB89931.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 5581 6858 . + . ID=gene-HMPREF7215_1598;Name=HMPREF7215_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1598 GCA_000177335.1|ADFP01000105.1 Genbank CDS 5581 6858 . + 0 ID=cds-EFB89932.1;Parent=gene-HMPREF7215_1598;Dbxref=NCBI_GP:EFB89932.1;Name=EFB89932.1;Note=identified by match to protein family HMM PF09587;gbkey=CDS;locus_tag=HMPREF7215_1598;product=bacterial capsule synthesis protein;protein_id=EFB89932.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 6991 8418 . + . ID=gene-HMPREF7215_1599;Name=HMPREF7215_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1599 GCA_000177335.1|ADFP01000105.1 Genbank CDS 6991 8418 . + 0 ID=cds-EFB89933.1;Parent=gene-HMPREF7215_1599;Dbxref=NCBI_GP:EFB89933.1;Name=EFB89933.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887;gbkey=CDS;locus_tag=HMPREF7215_1599;product=putative dipeptidase;protein_id=EFB89933.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 8465 8641 . - . ID=gene-HMPREF7215_1600;Name=HMPREF7215_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1600 GCA_000177335.1|ADFP01000105.1 Genbank CDS 8465 8641 . - 0 ID=cds-EFB89934.1;Parent=gene-HMPREF7215_1600;Dbxref=NCBI_GP:EFB89934.1;Name=EFB89934.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1600;product=hypothetical protein;protein_id=EFB89934.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 8755 9966 . + . ID=gene-HMPREF7215_1601;Name=HMPREF7215_1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1601 GCA_000177335.1|ADFP01000105.1 Genbank CDS 8755 9966 . + 0 ID=cds-EFB89935.1;Parent=gene-HMPREF7215_1601;Dbxref=NCBI_GP:EFB89935.1;Name=EFB89935.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF7215_1601;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFB89935.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 9963 10121 . + . ID=gene-HMPREF7215_1602;Name=HMPREF7215_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1602 GCA_000177335.1|ADFP01000105.1 Genbank CDS 9963 10121 . + 0 ID=cds-EFB89936.1;Parent=gene-HMPREF7215_1602;Dbxref=NCBI_GP:EFB89936.1;Name=EFB89936.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1602;product=hypothetical protein;protein_id=EFB89936.1;transl_table=11 GCA_000177335.1|ADFP01000105.1 Genbank gene 10485 17930 . - . ID=gene-HMPREF7215_1603;Name=HMPREF7215_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1603 GCA_000177335.1|ADFP01000105.1 Genbank CDS 10485 17930 . - 0 ID=cds-EFB89937.1;Parent=gene-HMPREF7215_1603;Dbxref=NCBI_GP:EFB89937.1;Name=EFB89937.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF7215_1603;product=Hep/Hag repeat protein;protein_id=EFB89937.1;transl_table=11 ##sequence-region ADFP01000104.1 1 6710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000104.1 Genbank region 1 6710 . + . ID=ADFP01000104.1:1..6710;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000104.1 Genbank gene 1 94 . - . ID=gene-HMPREF7215_1647;Name=HMPREF7215_1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1647;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000104.1 Genbank CDS 1 94 . - 0 ID=cds-EFB89938.1;Parent=gene-HMPREF7215_1647;Dbxref=NCBI_GP:EFB89938.1;Name=EFB89938.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1647;partial=true;product=hypothetical protein;protein_id=EFB89938.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 311 1312 . + . ID=gene-HMPREF7215_1648;Name=HMPREF7215_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1648 GCA_000177335.1|ADFP01000104.1 Genbank CDS 311 1312 . + 0 ID=cds-EFB89939.1;Parent=gene-HMPREF7215_1648;Dbxref=NCBI_GP:EFB89939.1;Name=EFB89939.1;gbkey=CDS;locus_tag=HMPREF7215_1648;product=hypothetical protein;protein_id=EFB89939.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 1355 1729 . + . ID=gene-HMPREF7215_1649;Name=HMPREF7215_1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1649 GCA_000177335.1|ADFP01000104.1 Genbank CDS 1355 1729 . + 0 ID=cds-EFB89940.1;Parent=gene-HMPREF7215_1649;Dbxref=NCBI_GP:EFB89940.1;Name=EFB89940.1;Note=identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;locus_tag=HMPREF7215_1649;product=alkylhydroperoxidase AhpD family core domain protein;protein_id=EFB89940.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 1799 2803 . + . ID=gene-HMPREF7215_1650;Name=HMPREF7215_1650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1650 GCA_000177335.1|ADFP01000104.1 Genbank CDS 1799 2803 . + 0 ID=cds-EFB89941.1;Parent=gene-HMPREF7215_1650;Dbxref=NCBI_GP:EFB89941.1;Name=EFB89941.1;gbkey=CDS;locus_tag=HMPREF7215_1650;product=hypothetical protein;protein_id=EFB89941.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 2902 3438 . + . ID=gene-HMPREF7215_1651;Name=HMPREF7215_1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1651 GCA_000177335.1|ADFP01000104.1 Genbank CDS 2902 3438 . + 0 ID=cds-EFB89942.1;Parent=gene-HMPREF7215_1651;Dbxref=NCBI_GP:EFB89942.1;Name=EFB89942.1;Note=identified by match to protein family HMM PF09719%3B match to protein family HMM TIGR01909;gbkey=CDS;locus_tag=HMPREF7215_1651;product=oxidoreductase;protein_id=EFB89942.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 3458 4369 . + . ID=gene-HMPREF7215_1652;Name=HMPREF7215_1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1652 GCA_000177335.1|ADFP01000104.1 Genbank CDS 3458 4369 . + 0 ID=cds-EFB89943.1;Parent=gene-HMPREF7215_1652;Dbxref=NCBI_GP:EFB89943.1;Name=EFB89943.1;Note=identified by match to protein family HMM PF03595;gbkey=CDS;locus_tag=HMPREF7215_1652;product=C4-dicarboxylate transporter/malic acid transport protein;protein_id=EFB89943.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 4553 5590 . + . ID=gene-HMPREF7215_1653;Name=HMPREF7215_1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1653 GCA_000177335.1|ADFP01000104.1 Genbank CDS 4553 5590 . + 0 ID=cds-EFB89944.1;Parent=gene-HMPREF7215_1653;Dbxref=NCBI_GP:EFB89944.1;Name=EFB89944.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1653;product=ABC transporter%2C permease protein;protein_id=EFB89944.1;transl_table=11 GCA_000177335.1|ADFP01000104.1 Genbank gene 5597 6367 . + . ID=gene-HMPREF7215_1654;Name=HMPREF7215_1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1654 GCA_000177335.1|ADFP01000104.1 Genbank CDS 5597 6367 . + 0 ID=cds-EFB89945.1;Parent=gene-HMPREF7215_1654;Dbxref=NCBI_GP:EFB89945.1;Name=EFB89945.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1654;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89945.1;transl_table=11 ##sequence-region ADFP01000103.1 1 12311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000103.1 Genbank region 1 12311 . + . ID=ADFP01000103.1:1..12311;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000103.1 Genbank gene 101 334 . + . ID=gene-HMPREF7215_1337;Name=HMPREF7215_1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1337 GCA_000177335.1|ADFP01000103.1 Genbank CDS 101 334 . + 0 ID=cds-EFB89946.1;Parent=gene-HMPREF7215_1337;Dbxref=NCBI_GP:EFB89946.1;Name=EFB89946.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1337;product=hypothetical protein;protein_id=EFB89946.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 459 1643 . + . ID=gene-HMPREF7215_1338;Name=HMPREF7215_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1338 GCA_000177335.1|ADFP01000103.1 Genbank CDS 459 1643 . + 0 ID=cds-EFB89947.1;Parent=gene-HMPREF7215_1338;Dbxref=NCBI_GP:EFB89947.1;Name=EFB89947.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;locus_tag=HMPREF7215_1338;product=Cys/Met metabolism PLP-dependent enzyme;protein_id=EFB89947.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 1698 3122 . + . ID=gene-HMPREF7215_1339;Name=HMPREF7215_1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1339 GCA_000177335.1|ADFP01000103.1 Genbank CDS 1698 3122 . + 0 ID=cds-EFB89948.1;Parent=gene-HMPREF7215_1339;Dbxref=NCBI_GP:EFB89948.1;Name=EFB89948.1;Note=identified by match to protein family HMM PF03606;gbkey=CDS;locus_tag=HMPREF7215_1339;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB89948.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 3276 3428 . - . ID=gene-HMPREF7215_1340;Name=HMPREF7215_1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1340 GCA_000177335.1|ADFP01000103.1 Genbank CDS 3276 3428 . - 0 ID=cds-EFB89949.1;Parent=gene-HMPREF7215_1340;Dbxref=NCBI_GP:EFB89949.1;Name=EFB89949.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1340;product=hypothetical protein;protein_id=EFB89949.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 3425 3781 . - . ID=gene-HMPREF7215_1341;Name=HMPREF7215_1341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1341 GCA_000177335.1|ADFP01000103.1 Genbank CDS 3425 3781 . - 0 ID=cds-EFB89950.1;Parent=gene-HMPREF7215_1341;Dbxref=NCBI_GP:EFB89950.1;Name=EFB89950.1;gbkey=CDS;locus_tag=HMPREF7215_1341;product=hypothetical protein;protein_id=EFB89950.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 3910 5382 . - . ID=gene-HMPREF7215_1342;Name=HMPREF7215_1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1342 GCA_000177335.1|ADFP01000103.1 Genbank CDS 3910 5382 . - 0 ID=cds-EFB89951.1;Parent=gene-HMPREF7215_1342;Dbxref=NCBI_GP:EFB89951.1;Name=EFB89951.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF7215_1342;product=Na+/H+ antiporter family protein;protein_id=EFB89951.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 5664 7241 . - . ID=gene-HMPREF7215_1343;Name=HMPREF7215_1343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1343 GCA_000177335.1|ADFP01000103.1 Genbank CDS 5664 7241 . - 0 ID=cds-EFB89952.1;Parent=gene-HMPREF7215_1343;Dbxref=NCBI_GP:EFB89952.1;Name=EFB89952.1;Note=identified by match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1343;product=amidohydrolase family protein;protein_id=EFB89952.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 7541 8728 . - . ID=gene-HMPREF7215_1344;Name=HMPREF7215_1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1344 GCA_000177335.1|ADFP01000103.1 Genbank CDS 7541 8728 . - 0 ID=cds-EFB89953.1;Parent=gene-HMPREF7215_1344;Dbxref=NCBI_GP:EFB89953.1;Name=EFB89953.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_1344;product=aminotransferase%2C class I/II;protein_id=EFB89953.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 8880 10346 . - . ID=gene-HMPREF7215_1345;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1345 GCA_000177335.1|ADFP01000103.1 Genbank CDS 8880 10346 . - 0 ID=cds-EFB89954.1;Parent=gene-HMPREF7215_1345;Dbxref=NCBI_GP:EFB89954.1;Name=EFB89954.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM TIGR00931;gbkey=CDS;gene=nhaC;locus_tag=HMPREF7215_1345;product=Na+/H+ antiporter NhaC;protein_id=EFB89954.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 10479 11234 . - . ID=gene-HMPREF7215_1346;Name=HMPREF7215_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1346 GCA_000177335.1|ADFP01000103.1 Genbank CDS 10479 11234 . - 0 ID=cds-EFB89955.1;Parent=gene-HMPREF7215_1346;Dbxref=NCBI_GP:EFB89955.1;Name=EFB89955.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=HMPREF7215_1346;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFB89955.1;transl_table=11 GCA_000177335.1|ADFP01000103.1 Genbank gene 11316 12311 . - . ID=gene-HMPREF7215_1347;Name=HMPREF7215_1347;end_range=12311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1347;partial=true GCA_000177335.1|ADFP01000103.1 Genbank CDS 11316 12311 . - 0 ID=cds-EFB89956.1;Parent=gene-HMPREF7215_1347;Dbxref=NCBI_GP:EFB89956.1;Name=EFB89956.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01513;end_range=12311,.;gbkey=CDS;locus_tag=HMPREF7215_1347;partial=true;product=NAD(+)/NADH kinase;protein_id=EFB89956.1;transl_table=11 ##sequence-region ADFP01000102.1 1 14432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000102.1 Genbank region 1 14432 . + . ID=ADFP01000102.1:1..14432;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000102.1 Genbank gene 1 429 . + . ID=gene-HMPREF7215_0497;Name=HMPREF7215_0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0497;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000102.1 Genbank CDS 1 429 . + 0 ID=cds-EFB89957.1;Parent=gene-HMPREF7215_0497;Dbxref=NCBI_GP:EFB89957.1;Name=EFB89957.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0497;partial=true;product=DbpA RNA binding domain protein;protein_id=EFB89957.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 608 976 . + . ID=gene-HMPREF7215_0498;Name=HMPREF7215_0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0498 GCA_000177335.1|ADFP01000102.1 Genbank CDS 608 976 . + 0 ID=cds-EFB89958.1;Parent=gene-HMPREF7215_0498;Dbxref=NCBI_GP:EFB89958.1;Name=EFB89958.1;gbkey=CDS;locus_tag=HMPREF7215_0498;product=hypothetical protein;protein_id=EFB89958.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 973 1086 . + . ID=gene-HMPREF7215_0499;Name=HMPREF7215_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0499 GCA_000177335.1|ADFP01000102.1 Genbank CDS 973 1086 . + 0 ID=cds-EFB89959.1;Parent=gene-HMPREF7215_0499;Dbxref=NCBI_GP:EFB89959.1;Name=EFB89959.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0499;product=hypothetical protein;protein_id=EFB89959.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 1246 1362 . - . ID=gene-HMPREF7215_0500;Name=HMPREF7215_0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0500 GCA_000177335.1|ADFP01000102.1 Genbank CDS 1246 1362 . - 0 ID=cds-EFB89960.1;Parent=gene-HMPREF7215_0500;Dbxref=NCBI_GP:EFB89960.1;Name=EFB89960.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0500;product=hypothetical protein;protein_id=EFB89960.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 1342 2319 . + . ID=gene-HMPREF7215_0501;Name=HMPREF7215_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0501 GCA_000177335.1|ADFP01000102.1 Genbank CDS 1342 2319 . + 0 ID=cds-EFB89961.1;Parent=gene-HMPREF7215_0501;Dbxref=NCBI_GP:EFB89961.1;Name=EFB89961.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=HMPREF7215_0501;product=HAD hydrolase%2C family IA%2C variant 3;protein_id=EFB89961.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 2438 3217 . - . ID=gene-HMPREF7215_0502;Name=HMPREF7215_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0502 GCA_000177335.1|ADFP01000102.1 Genbank CDS 2438 3217 . - 0 ID=cds-EFB89962.1;Parent=gene-HMPREF7215_0502;Dbxref=NCBI_GP:EFB89962.1;Name=EFB89962.1;Note=identified by match to protein family HMM PF02698;gbkey=CDS;locus_tag=HMPREF7215_0502;product=hypothetical protein;protein_id=EFB89962.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 3214 3903 . - . ID=gene-HMPREF7215_0503;Name=HMPREF7215_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0503 GCA_000177335.1|ADFP01000102.1 Genbank CDS 3214 3903 . - 0 ID=cds-EFB89963.1;Parent=gene-HMPREF7215_0503;Dbxref=NCBI_GP:EFB89963.1;Name=EFB89963.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_0503;product=FCD domain protein;protein_id=EFB89963.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 4135 4578 . - . ID=gene-HMPREF7215_0504;Name=HMPREF7215_0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0504 GCA_000177335.1|ADFP01000102.1 Genbank CDS 4135 4578 . - 0 ID=cds-EFB89964.1;Parent=gene-HMPREF7215_0504;Dbxref=NCBI_GP:EFB89964.1;Name=EFB89964.1;gbkey=CDS;locus_tag=HMPREF7215_0504;product=hypothetical protein;protein_id=EFB89964.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 4603 5418 . - . ID=gene-HMPREF7215_0505;Name=HMPREF7215_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0505 GCA_000177335.1|ADFP01000102.1 Genbank CDS 4603 5418 . - 0 ID=cds-EFB89965.1;Parent=gene-HMPREF7215_0505;Dbxref=NCBI_GP:EFB89965.1;Name=EFB89965.1;gbkey=CDS;locus_tag=HMPREF7215_0505;product=hypothetical protein;protein_id=EFB89965.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 5503 6816 . - . ID=gene-HMPREF7215_0506;Name=HMPREF7215_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0506 GCA_000177335.1|ADFP01000102.1 Genbank CDS 5503 6816 . - 0 ID=cds-EFB89966.1;Parent=gene-HMPREF7215_0506;Dbxref=NCBI_GP:EFB89966.1;Name=EFB89966.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_0506;product=amidohydrolase;protein_id=EFB89966.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 6982 7113 . - . ID=gene-HMPREF7215_0507;Name=HMPREF7215_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0507 GCA_000177335.1|ADFP01000102.1 Genbank CDS 6982 7113 . - 0 ID=cds-EFB89967.1;Parent=gene-HMPREF7215_0507;Dbxref=NCBI_GP:EFB89967.1;Name=EFB89967.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0507;product=hypothetical protein;protein_id=EFB89967.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 7145 7223 . + . ID=gene-HMPREF7215_0508;Name=HMPREF7215_0508;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0508 GCA_000177335.1|ADFP01000102.1 Genbank tRNA 7145 7223 . + . ID=rna-HMPREF7215_0508;Parent=gene-HMPREF7215_0508;gbkey=tRNA;locus_tag=HMPREF7215_0508;product=tRNA-Arg GCA_000177335.1|ADFP01000102.1 Genbank exon 7145 7223 . + . ID=exon-HMPREF7215_0508-1;Parent=rna-HMPREF7215_0508;gbkey=tRNA;locus_tag=HMPREF7215_0508;product=tRNA-Arg GCA_000177335.1|ADFP01000102.1 Genbank gene 7240 7313 . + . ID=gene-HMPREF7215_0509;Name=HMPREF7215_0509;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0509 GCA_000177335.1|ADFP01000102.1 Genbank tRNA 7240 7313 . + . ID=rna-HMPREF7215_0509;Parent=gene-HMPREF7215_0509;gbkey=tRNA;locus_tag=HMPREF7215_0509;product=tRNA-Gln GCA_000177335.1|ADFP01000102.1 Genbank exon 7240 7313 . + . ID=exon-HMPREF7215_0509-1;Parent=rna-HMPREF7215_0509;gbkey=tRNA;locus_tag=HMPREF7215_0509;product=tRNA-Gln GCA_000177335.1|ADFP01000102.1 Genbank gene 7461 9800 . - . ID=gene-HMPREF7215_0510;Name=HMPREF7215_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0510 GCA_000177335.1|ADFP01000102.1 Genbank CDS 7461 9800 . - 0 ID=cds-EFB89968.1;Parent=gene-HMPREF7215_0510;Dbxref=NCBI_GP:EFB89968.1;Name=EFB89968.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713;gbkey=CDS;locus_tag=HMPREF7215_0510;product=MutS2 family protein;protein_id=EFB89968.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 9814 10317 . - . ID=gene-HMPREF7215_0511;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0511 GCA_000177335.1|ADFP01000102.1 Genbank CDS 9814 10317 . - 0 ID=cds-EFB89969.1;Parent=gene-HMPREF7215_0511;Dbxref=NCBI_GP:EFB89969.1;Name=EFB89969.1;Note=identified by match to protein family HMM PF02674;gbkey=CDS;gene=cvpA;locus_tag=HMPREF7215_0511;product=CvpA family protein;protein_id=EFB89969.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 10314 10601 . - . ID=gene-HMPREF7215_0512;Name=HMPREF7215_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0512 GCA_000177335.1|ADFP01000102.1 Genbank CDS 10314 10601 . - 0 ID=cds-EFB89970.1;Parent=gene-HMPREF7215_0512;Dbxref=NCBI_GP:EFB89970.1;Name=EFB89970.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0512;product=hypothetical protein;protein_id=EFB89970.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 10606 10899 . - . ID=gene-HMPREF7215_0513;Name=HMPREF7215_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0513 GCA_000177335.1|ADFP01000102.1 Genbank CDS 10606 10899 . - 0 ID=cds-EFB89971.1;Parent=gene-HMPREF7215_0513;Dbxref=NCBI_GP:EFB89971.1;Name=EFB89971.1;gbkey=CDS;locus_tag=HMPREF7215_0513;product=hypothetical protein;protein_id=EFB89971.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 10949 13330 . - . ID=gene-HMPREF7215_0514;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HMPREF7215_0514 GCA_000177335.1|ADFP01000102.1 Genbank CDS 10949 13330 . - 0 ID=cds-EFB89972.1;Parent=gene-HMPREF7215_0514;Dbxref=NCBI_GP:EFB89972.1;Name=EFB89972.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472;gbkey=CDS;gene=pheT;locus_tag=HMPREF7215_0514;product=phenylalanine--tRNA ligase%2C beta subunit;protein_id=EFB89972.1;transl_table=11 GCA_000177335.1|ADFP01000102.1 Genbank gene 13330 14373 . - . ID=gene-HMPREF7215_0515;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0515 GCA_000177335.1|ADFP01000102.1 Genbank CDS 13330 14373 . - 0 ID=cds-EFB89973.1;Parent=gene-HMPREF7215_0515;Dbxref=NCBI_GP:EFB89973.1;Name=EFB89973.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468;gbkey=CDS;gene=pheS;locus_tag=HMPREF7215_0515;product=phenylalanine--tRNA ligase%2C alpha subunit;protein_id=EFB89973.1;transl_table=11 ##sequence-region ADFP01000101.1 1 10065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000101.1 Genbank region 1 10065 . + . ID=ADFP01000101.1:1..10065;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000101.1 Genbank gene 53 1228 . - . ID=gene-HMPREF7215_1502;Name=HMPREF7215_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1502 GCA_000177335.1|ADFP01000101.1 Genbank CDS 53 1228 . - 0 ID=cds-EFB89974.1;Parent=gene-HMPREF7215_1502;Dbxref=NCBI_GP:EFB89974.1;Name=EFB89974.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02746;gbkey=CDS;locus_tag=HMPREF7215_1502;product=mandelate racemase/muconate lactonizing enzyme%2C N-terminal domain protein;protein_id=EFB89974.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 1304 2620 . - . ID=gene-HMPREF7215_1503;Name=HMPREF7215_1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1503 GCA_000177335.1|ADFP01000101.1 Genbank CDS 1304 2620 . - 0 ID=cds-EFB89975.1;Parent=gene-HMPREF7215_1503;Dbxref=NCBI_GP:EFB89975.1;Name=EFB89975.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF7215_1503;product=amino acid permease;protein_id=EFB89975.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 2771 2917 . - . ID=gene-HMPREF7215_1504;Name=HMPREF7215_1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1504 GCA_000177335.1|ADFP01000101.1 Genbank CDS 2771 2917 . - 0 ID=cds-EFB89976.1;Parent=gene-HMPREF7215_1504;Dbxref=NCBI_GP:EFB89976.1;Name=EFB89976.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1504;product=hypothetical protein;protein_id=EFB89976.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 3075 4010 . - . ID=gene-HMPREF7215_1505;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1505 GCA_000177335.1|ADFP01000101.1 Genbank CDS 3075 4010 . - 0 ID=cds-EFB89977.1;Parent=gene-HMPREF7215_1505;Dbxref=NCBI_GP:EFB89977.1;Name=EFB89977.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;gene=gltC;locus_tag=HMPREF7215_1505;product=HTH-type transcriptional regulator GltC;protein_id=EFB89977.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank binding_site 4402 4449 . + . ID=id-ADFP01000101.1:4402..4449;Note=PreQ1 riboswitch%3B Rfam score 25.89;bound_moiety=pre-queosine1;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00522 GCA_000177335.1|ADFP01000101.1 Genbank gene 4591 5085 . + . ID=gene-HMPREF7215_1507;Name=HMPREF7215_1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1507 GCA_000177335.1|ADFP01000101.1 Genbank CDS 4591 5085 . + 0 ID=cds-EFB89978.1;Parent=gene-HMPREF7215_1507;Dbxref=NCBI_GP:EFB89978.1;Name=EFB89978.1;Note=identified by match to protein family HMM PF06177;gbkey=CDS;locus_tag=HMPREF7215_1507;product=hypothetical protein;protein_id=EFB89978.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 5090 5581 . + . ID=gene-HMPREF7215_1508;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1508 GCA_000177335.1|ADFP01000101.1 Genbank CDS 5090 5581 . + 0 ID=cds-EFB89979.1;Parent=gene-HMPREF7215_1508;Dbxref=NCBI_GP:EFB89979.1;Name=EFB89979.1;Note=identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139;gbkey=CDS;gene=queF;locus_tag=HMPREF7215_1508;product=preQ(1) synthase;protein_id=EFB89979.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 5678 5800 . - . ID=gene-HMPREF7215_1509;Name=HMPREF7215_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1509 GCA_000177335.1|ADFP01000101.1 Genbank CDS 5678 5800 . - 0 ID=cds-EFB89980.1;Parent=gene-HMPREF7215_1509;Dbxref=NCBI_GP:EFB89980.1;Name=EFB89980.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1509;product=hypothetical protein;protein_id=EFB89980.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 5809 6171 . - . ID=gene-HMPREF7215_1510;Name=HMPREF7215_1510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1510 GCA_000177335.1|ADFP01000101.1 Genbank CDS 5809 6171 . - 0 ID=cds-EFB89981.1;Parent=gene-HMPREF7215_1510;Dbxref=NCBI_GP:EFB89981.1;Name=EFB89981.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_1510;product=cupin domain protein;protein_id=EFB89981.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 6196 6702 . - . ID=gene-HMPREF7215_1511;Name=HMPREF7215_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1511 GCA_000177335.1|ADFP01000101.1 Genbank CDS 6196 6702 . - 0 ID=cds-EFB89982.1;Parent=gene-HMPREF7215_1511;Dbxref=NCBI_GP:EFB89982.1;Name=EFB89982.1;Note=identified by match to protein family HMM PF09719%3B match to protein family HMM TIGR01909;gbkey=CDS;locus_tag=HMPREF7215_1511;product=oxidoreductase;protein_id=EFB89982.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 6798 7640 . + . ID=gene-HMPREF7215_1512;Name=HMPREF7215_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1512 GCA_000177335.1|ADFP01000101.1 Genbank CDS 6798 7640 . + 0 ID=cds-EFB89983.1;Parent=gene-HMPREF7215_1512;Dbxref=NCBI_GP:EFB89983.1;Name=EFB89983.1;Note=identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587;gbkey=CDS;locus_tag=HMPREF7215_1512;product=apurinic endonuclease (APN1);protein_id=EFB89983.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 7769 9016 . + . ID=gene-HMPREF7215_1513;Name=HMPREF7215_1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1513 GCA_000177335.1|ADFP01000101.1 Genbank CDS 7769 9016 . + 0 ID=cds-EFB89984.1;Parent=gene-HMPREF7215_1513;Dbxref=NCBI_GP:EFB89984.1;Name=EFB89984.1;gbkey=CDS;locus_tag=HMPREF7215_1513;product=hypothetical protein;protein_id=EFB89984.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 9087 9818 . + . ID=gene-HMPREF7215_1514;Name=HMPREF7215_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1514 GCA_000177335.1|ADFP01000101.1 Genbank CDS 9087 9818 . + 0 ID=cds-EFB89985.1;Parent=gene-HMPREF7215_1514;Dbxref=NCBI_GP:EFB89985.1;Name=EFB89985.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02682%3B match to protein family HMM TIGR00370;gbkey=CDS;locus_tag=HMPREF7215_1514;product=TIGR00370 family protein;protein_id=EFB89985.1;transl_table=11 GCA_000177335.1|ADFP01000101.1 Genbank gene 9815 10065 . + . ID=gene-HMPREF7215_1515;Name=HMPREF7215_1515;end_range=10065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1515;partial=true GCA_000177335.1|ADFP01000101.1 Genbank CDS 9815 10065 . + 0 ID=cds-EFB89986.1;Parent=gene-HMPREF7215_1515;Dbxref=NCBI_GP:EFB89986.1;Name=EFB89986.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=10065,.;gbkey=CDS;locus_tag=HMPREF7215_1515;partial=true;product=hypothetical protein;protein_id=EFB89986.1;transl_table=11 ##sequence-region ADFP01000100.1 1 24084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000100.1 Genbank region 1 24084 . + . ID=ADFP01000100.1:1..24084;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000100.1 Genbank gene 45 1001 . - . ID=gene-HMPREF7215_1090;Name=HMPREF7215_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1090 GCA_000177335.1|ADFP01000100.1 Genbank CDS 45 1001 . - 0 ID=cds-EFB89987.1;Parent=gene-HMPREF7215_1090;Dbxref=NCBI_GP:EFB89987.1;Name=EFB89987.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1090;product=LysR substrate binding domain protein;protein_id=EFB89987.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 1124 2494 . + . ID=gene-HMPREF7215_1091;Name=HMPREF7215_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1091 GCA_000177335.1|ADFP01000100.1 Genbank CDS 1124 2494 . + 0 ID=cds-EFB89988.1;Parent=gene-HMPREF7215_1091;Dbxref=NCBI_GP:EFB89988.1;Name=EFB89988.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1091;product=peptidase dimerization domain protein;protein_id=EFB89988.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 2727 4262 . + . ID=gene-HMPREF7215_1092;Name=HMPREF7215_1092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1092 GCA_000177335.1|ADFP01000100.1 Genbank CDS 2727 4262 . + 0 ID=cds-EFB89989.1;Parent=gene-HMPREF7215_1092;Dbxref=NCBI_GP:EFB89989.1;Name=EFB89989.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1092;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB89989.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 4363 5316 . + . ID=gene-HMPREF7215_1093;Name=HMPREF7215_1093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1093 GCA_000177335.1|ADFP01000100.1 Genbank CDS 4363 5316 . + 0 ID=cds-EFB89990.1;Parent=gene-HMPREF7215_1093;Dbxref=NCBI_GP:EFB89990.1;Name=EFB89990.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1093;product=ABC transporter%2C permease protein;protein_id=EFB89990.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 5313 6224 . + . ID=gene-HMPREF7215_1094;Name=HMPREF7215_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1094 GCA_000177335.1|ADFP01000100.1 Genbank CDS 5313 6224 . + 0 ID=cds-EFB89991.1;Parent=gene-HMPREF7215_1094;Dbxref=NCBI_GP:EFB89991.1;Name=EFB89991.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1094;product=ABC transporter%2C permease protein;protein_id=EFB89991.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 6243 7229 . + . ID=gene-HMPREF7215_1095;Name=HMPREF7215_1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1095 GCA_000177335.1|ADFP01000100.1 Genbank CDS 6243 7229 . + 0 ID=cds-EFB89992.1;Parent=gene-HMPREF7215_1095;Dbxref=NCBI_GP:EFB89992.1;Name=EFB89992.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1095;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89992.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 7233 8180 . + . ID=gene-HMPREF7215_1096;Name=HMPREF7215_1096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1096 GCA_000177335.1|ADFP01000100.1 Genbank CDS 7233 8180 . + 0 ID=cds-EFB89993.1;Parent=gene-HMPREF7215_1096;Dbxref=NCBI_GP:EFB89993.1;Name=EFB89993.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1096;product=ABC transporter%2C ATP-binding protein;protein_id=EFB89993.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 8196 8312 . + . ID=gene-HMPREF7215_1097;Name=HMPREF7215_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1097 GCA_000177335.1|ADFP01000100.1 Genbank CDS 8196 8312 . + 0 ID=cds-EFB89994.1;Parent=gene-HMPREF7215_1097;Dbxref=NCBI_GP:EFB89994.1;Name=EFB89994.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1097;product=hypothetical protein;protein_id=EFB89994.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 8309 9358 . + . ID=gene-HMPREF7215_1098;Name=HMPREF7215_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1098 GCA_000177335.1|ADFP01000100.1 Genbank CDS 8309 9358 . + 0 ID=cds-EFB89995.1;Parent=gene-HMPREF7215_1098;Dbxref=NCBI_GP:EFB89995.1;Name=EFB89995.1;Note=identified by match to protein family HMM PF03417;gbkey=CDS;locus_tag=HMPREF7215_1098;product=Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;protein_id=EFB89995.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 9372 10754 . + . ID=gene-HMPREF7215_1099;Name=HMPREF7215_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1099 GCA_000177335.1|ADFP01000100.1 Genbank CDS 9372 10754 . + 0 ID=cds-EFB89996.1;Parent=gene-HMPREF7215_1099;Dbxref=NCBI_GP:EFB89996.1;Name=EFB89996.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1099;product=peptidase dimerization domain protein;protein_id=EFB89996.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 10747 11064 . + . ID=gene-HMPREF7215_1100;Name=HMPREF7215_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1100 GCA_000177335.1|ADFP01000100.1 Genbank CDS 10747 11064 . + 0 ID=cds-EFB89997.1;Parent=gene-HMPREF7215_1100;Dbxref=NCBI_GP:EFB89997.1;Name=EFB89997.1;gbkey=CDS;locus_tag=HMPREF7215_1100;product=hypothetical protein;protein_id=EFB89997.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 11100 11216 . + . ID=gene-HMPREF7215_1101;Name=HMPREF7215_1101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1101 GCA_000177335.1|ADFP01000100.1 Genbank CDS 11100 11216 . + 0 ID=cds-EFB89998.1;Parent=gene-HMPREF7215_1101;Dbxref=NCBI_GP:EFB89998.1;Name=EFB89998.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1101;product=hypothetical protein;protein_id=EFB89998.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 11336 12688 . + . ID=gene-HMPREF7215_1102;Name=HMPREF7215_1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1102 GCA_000177335.1|ADFP01000100.1 Genbank CDS 11336 12688 . + 0 ID=cds-EFB89999.1;Parent=gene-HMPREF7215_1102;Dbxref=NCBI_GP:EFB89999.1;Name=EFB89999.1;Note=identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03025;gbkey=CDS;locus_tag=HMPREF7215_1102;product=exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase;protein_id=EFB89999.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 12775 14430 . - . ID=gene-HMPREF7215_1103;Name=HMPREF7215_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1103 GCA_000177335.1|ADFP01000100.1 Genbank CDS 12775 14430 . - 0 ID=cds-EFB90000.1;Parent=gene-HMPREF7215_1103;Dbxref=NCBI_GP:EFB90000.1;Name=EFB90000.1;gbkey=CDS;locus_tag=HMPREF7215_1103;product=hypothetical protein;protein_id=EFB90000.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 14835 14954 . + . ID=gene-HMPREF7215_1104;Name=HMPREF7215_1104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1104 GCA_000177335.1|ADFP01000100.1 Genbank CDS 14835 14954 . + 0 ID=cds-EFB90001.1;Parent=gene-HMPREF7215_1104;Dbxref=NCBI_GP:EFB90001.1;Name=EFB90001.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1104;product=hypothetical protein;protein_id=EFB90001.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 14983 15834 . + . ID=gene-HMPREF7215_1105;Name=HMPREF7215_1105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1105 GCA_000177335.1|ADFP01000100.1 Genbank CDS 14983 15834 . + 0 ID=cds-EFB90002.1;Parent=gene-HMPREF7215_1105;Dbxref=NCBI_GP:EFB90002.1;Name=EFB90002.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1105;product=hypothetical protein;protein_id=EFB90002.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 15858 16787 . + . ID=gene-HMPREF7215_1106;Name=HMPREF7215_1106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1106 GCA_000177335.1|ADFP01000100.1 Genbank CDS 15858 16787 . + 0 ID=cds-EFB90003.1;Parent=gene-HMPREF7215_1106;Dbxref=NCBI_GP:EFB90003.1;Name=EFB90003.1;gbkey=CDS;locus_tag=HMPREF7215_1106;product=hypothetical protein;protein_id=EFB90003.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 16861 18276 . + . ID=gene-HMPREF7215_1108;Name=HMPREF7215_1108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1108 GCA_000177335.1|ADFP01000100.1 Genbank CDS 16861 18276 . + 0 ID=cds-EFB90004.1;Parent=gene-HMPREF7215_1108;Dbxref=NCBI_GP:EFB90004.1;Name=EFB90004.1;Note=identified by match to protein family HMM PF07719;gbkey=CDS;locus_tag=HMPREF7215_1108;product=tetratricopeptide repeat protein;protein_id=EFB90004.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 18240 18374 . - . ID=gene-HMPREF7215_1107;Name=HMPREF7215_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1107 GCA_000177335.1|ADFP01000100.1 Genbank CDS 18240 18374 . - 0 ID=cds-EFB90005.1;Parent=gene-HMPREF7215_1107;Dbxref=NCBI_GP:EFB90005.1;Name=EFB90005.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1107;product=hypothetical protein;protein_id=EFB90005.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 18423 19040 . - . ID=gene-HMPREF7215_1109;Name=HMPREF7215_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1109 GCA_000177335.1|ADFP01000100.1 Genbank CDS 18423 19040 . - 0 ID=cds-EFB90006.1;Parent=gene-HMPREF7215_1109;Dbxref=NCBI_GP:EFB90006.1;Name=EFB90006.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1109;product=hypothetical protein;protein_id=EFB90006.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 19037 19159 . - . ID=gene-HMPREF7215_1110;Name=HMPREF7215_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1110 GCA_000177335.1|ADFP01000100.1 Genbank CDS 19037 19159 . - 0 ID=cds-EFB90007.1;Parent=gene-HMPREF7215_1110;Dbxref=NCBI_GP:EFB90007.1;Name=EFB90007.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1110;product=hypothetical protein;protein_id=EFB90007.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 19558 19773 . + . ID=gene-HMPREF7215_1111;Name=HMPREF7215_1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1111 GCA_000177335.1|ADFP01000100.1 Genbank CDS 19558 19773 . + 0 ID=cds-EFB90008.1;Parent=gene-HMPREF7215_1111;Dbxref=NCBI_GP:EFB90008.1;Name=EFB90008.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1111;product=hypothetical protein;protein_id=EFB90008.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 19774 20625 . + . ID=gene-HMPREF7215_1112;Name=HMPREF7215_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1112 GCA_000177335.1|ADFP01000100.1 Genbank CDS 19774 20625 . + 0 ID=cds-EFB90009.1;Parent=gene-HMPREF7215_1112;Dbxref=NCBI_GP:EFB90009.1;Name=EFB90009.1;Note=identified by match to protein family HMM PF03781%3B 2.7.11.1;gbkey=CDS;locus_tag=HMPREF7215_1112;product=hypothetical protein;protein_id=EFB90009.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 20929 22287 . - . ID=gene-HMPREF7215_1113;Name=HMPREF7215_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1113 GCA_000177335.1|ADFP01000100.1 Genbank CDS 20929 22287 . - 0 ID=cds-EFB90010.1;Parent=gene-HMPREF7215_1113;Dbxref=NCBI_GP:EFB90010.1;Name=EFB90010.1;Note=identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951;gbkey=CDS;locus_tag=HMPREF7215_1113;product=glutamine synthetase%2C beta-grasp domain protein;protein_id=EFB90010.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 22443 22556 . - . ID=gene-HMPREF7215_1114;Name=HMPREF7215_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1114 GCA_000177335.1|ADFP01000100.1 Genbank CDS 22443 22556 . - 0 ID=cds-EFB90011.1;Parent=gene-HMPREF7215_1114;Dbxref=NCBI_GP:EFB90011.1;Name=EFB90011.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1114;product=hypothetical protein;protein_id=EFB90011.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 22706 23536 . - . ID=gene-HMPREF7215_1115;Name=HMPREF7215_1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1115 GCA_000177335.1|ADFP01000100.1 Genbank CDS 22706 23536 . - 0 ID=cds-EFB90012.1;Parent=gene-HMPREF7215_1115;Dbxref=NCBI_GP:EFB90012.1;Name=EFB90012.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1115;product=peptidase dimerization domain protein;protein_id=EFB90012.1;transl_table=11 GCA_000177335.1|ADFP01000100.1 Genbank gene 23591 23830 . - . ID=gene-HMPREF7215_1116;Name=HMPREF7215_1116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1116 GCA_000177335.1|ADFP01000100.1 Genbank CDS 23591 23830 . - 0 ID=cds-EFB90013.1;Parent=gene-HMPREF7215_1116;Dbxref=NCBI_GP:EFB90013.1;Name=EFB90013.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1116;product=hypothetical protein;protein_id=EFB90013.1;transl_table=11 ##sequence-region ADFP01000099.1 1 6638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000099.1 Genbank region 1 6638 . + . ID=ADFP01000099.1:1..6638;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000099.1 Genbank gene 246 1949 . + . ID=gene-HMPREF7215_1408;Name=HMPREF7215_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1408 GCA_000177335.1|ADFP01000099.1 Genbank CDS 246 1949 . + 0 ID=cds-EFB90014.1;Parent=gene-HMPREF7215_1408;Dbxref=NCBI_GP:EFB90014.1;Name=EFB90014.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1408;product=ABC transporter%2C permease protein;protein_id=EFB90014.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 1968 3032 . + . ID=gene-HMPREF7215_1409;Name=HMPREF7215_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1409 GCA_000177335.1|ADFP01000099.1 Genbank CDS 1968 3032 . + 0 ID=cds-EFB90015.1;Parent=gene-HMPREF7215_1409;Dbxref=NCBI_GP:EFB90015.1;Name=EFB90015.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;locus_tag=HMPREF7215_1409;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90015.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 3240 4184 . - . ID=gene-HMPREF7215_1410;Name=HMPREF7215_1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1410 GCA_000177335.1|ADFP01000099.1 Genbank CDS 3240 4184 . - 0 ID=cds-EFB90016.1;Parent=gene-HMPREF7215_1410;Dbxref=NCBI_GP:EFB90016.1;Name=EFB90016.1;Note=identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258;gbkey=CDS;locus_tag=HMPREF7215_1410;product=phosphoglycerate mutase 1 family;protein_id=EFB90016.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 4195 4860 . - . ID=gene-HMPREF7215_1411;Name=HMPREF7215_1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1411 GCA_000177335.1|ADFP01000099.1 Genbank CDS 4195 4860 . - 0 ID=cds-EFB90017.1;Parent=gene-HMPREF7215_1411;Dbxref=NCBI_GP:EFB90017.1;Name=EFB90017.1;gbkey=CDS;locus_tag=HMPREF7215_1411;product=hypothetical protein;protein_id=EFB90017.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 4975 5247 . + . ID=gene-HMPREF7215_1412;Name=HMPREF7215_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1412 GCA_000177335.1|ADFP01000099.1 Genbank CDS 4975 5247 . + 0 ID=cds-EFB90018.1;Parent=gene-HMPREF7215_1412;Dbxref=NCBI_GP:EFB90018.1;Name=EFB90018.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1412;product=hypothetical protein;protein_id=EFB90018.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 5240 5392 . + . ID=gene-HMPREF7215_1413;Name=HMPREF7215_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1413 GCA_000177335.1|ADFP01000099.1 Genbank CDS 5240 5392 . + 0 ID=cds-EFB90019.1;Parent=gene-HMPREF7215_1413;Dbxref=NCBI_GP:EFB90019.1;Name=EFB90019.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1413;product=hypothetical protein;protein_id=EFB90019.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 5467 5931 . + . ID=gene-HMPREF7215_1414;Name=HMPREF7215_1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1414 GCA_000177335.1|ADFP01000099.1 Genbank CDS 5467 5931 . + 0 ID=cds-EFB90020.1;Parent=gene-HMPREF7215_1414;Dbxref=NCBI_GP:EFB90020.1;Name=EFB90020.1;gbkey=CDS;locus_tag=HMPREF7215_1414;product=hypothetical protein;protein_id=EFB90020.1;transl_table=11 GCA_000177335.1|ADFP01000099.1 Genbank gene 5960 6638 . + . ID=gene-HMPREF7215_1415;Name=HMPREF7215_1415;end_range=6638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1415;partial=true GCA_000177335.1|ADFP01000099.1 Genbank CDS 5960 6638 . + 0 ID=cds-EFB90021.1;Parent=gene-HMPREF7215_1415;Dbxref=NCBI_GP:EFB90021.1;Name=EFB90021.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583;end_range=6638,.;gbkey=CDS;locus_tag=HMPREF7215_1415;partial=true;product=acetyltransferase%2C GNAT family;protein_id=EFB90021.1;transl_table=11 ##sequence-region ADFP01000098.1 1 9259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000098.1 Genbank region 1 9259 . + . ID=ADFP01000098.1:1..9259;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000098.1 Genbank gene 105 236 . - . ID=gene-HMPREF7215_1313;Name=HMPREF7215_1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1313 GCA_000177335.1|ADFP01000098.1 Genbank CDS 105 236 . - 0 ID=cds-EFB90022.1;Parent=gene-HMPREF7215_1313;Dbxref=NCBI_GP:EFB90022.1;Name=EFB90022.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1313;product=hypothetical protein;protein_id=EFB90022.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 468 1226 . - . ID=gene-HMPREF7215_1314;Name=HMPREF7215_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1314 GCA_000177335.1|ADFP01000098.1 Genbank CDS 468 1226 . - 0 ID=cds-EFB90023.1;Parent=gene-HMPREF7215_1314;Dbxref=NCBI_GP:EFB90023.1;Name=EFB90023.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;locus_tag=HMPREF7215_1314;product=putative CoA-substrate-specific enzyme activase;protein_id=EFB90023.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 1291 2430 . - . ID=gene-HMPREF7215_1315;Name=HMPREF7215_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1315 GCA_000177335.1|ADFP01000098.1 Genbank CDS 1291 2430 . - 0 ID=cds-EFB90024.1;Parent=gene-HMPREF7215_1315;Dbxref=NCBI_GP:EFB90024.1;Name=EFB90024.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;locus_tag=HMPREF7215_1315;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EFB90024.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 2691 3143 . - . ID=gene-HMPREF7215_1316;Name=HMPREF7215_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1316 GCA_000177335.1|ADFP01000098.1 Genbank CDS 2691 3143 . - 0 ID=cds-EFB90025.1;Parent=gene-HMPREF7215_1316;Dbxref=NCBI_GP:EFB90025.1;Name=EFB90025.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1316;product=ABC transporter%2C permease protein;protein_id=EFB90025.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 3150 3353 . - . ID=gene-HMPREF7215_1317;Name=HMPREF7215_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1317 GCA_000177335.1|ADFP01000098.1 Genbank CDS 3150 3353 . - 0 ID=cds-EFB90026.1;Parent=gene-HMPREF7215_1317;Dbxref=NCBI_GP:EFB90026.1;Name=EFB90026.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1317;product=amino acid ABC transporter%2C permease family protein;protein_id=EFB90026.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 3366 4109 . - . ID=gene-HMPREF7215_1318;Name=HMPREF7215_1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1318 GCA_000177335.1|ADFP01000098.1 Genbank CDS 3366 4109 . - 0 ID=cds-EFB90027.1;Parent=gene-HMPREF7215_1318;Dbxref=NCBI_GP:EFB90027.1;Name=EFB90027.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_1318;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB90027.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 4128 4901 . - . ID=gene-HMPREF7215_1319;Name=HMPREF7215_1319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1319 GCA_000177335.1|ADFP01000098.1 Genbank CDS 4128 4901 . - 0 ID=cds-EFB90028.1;Parent=gene-HMPREF7215_1319;Dbxref=NCBI_GP:EFB90028.1;Name=EFB90028.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1319;product=ABC transporter%2C permease protein;protein_id=EFB90028.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 4914 5960 . - . ID=gene-HMPREF7215_1320;Name=HMPREF7215_1320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1320 GCA_000177335.1|ADFP01000098.1 Genbank CDS 4914 5960 . - 0 ID=cds-EFB90029.1;Parent=gene-HMPREF7215_1320;Dbxref=NCBI_GP:EFB90029.1;Name=EFB90029.1;Note=identified by match to protein family HMM PF09084;gbkey=CDS;locus_tag=HMPREF7215_1320;product=NMT1/THI5-like protein;protein_id=EFB90029.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 6003 6866 . - . ID=gene-HMPREF7215_1321;Name=HMPREF7215_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1321 GCA_000177335.1|ADFP01000098.1 Genbank CDS 6003 6866 . - 0 ID=cds-EFB90030.1;Parent=gene-HMPREF7215_1321;Dbxref=NCBI_GP:EFB90030.1;Name=EFB90030.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1321;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90030.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 7232 7372 . + . ID=gene-HMPREF7215_1322;Name=HMPREF7215_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1322 GCA_000177335.1|ADFP01000098.1 Genbank CDS 7232 7372 . + 0 ID=cds-EFB90031.1;Parent=gene-HMPREF7215_1322;Dbxref=NCBI_GP:EFB90031.1;Name=EFB90031.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1322;product=hypothetical protein;protein_id=EFB90031.1;transl_table=11 GCA_000177335.1|ADFP01000098.1 Genbank gene 7435 9153 . + . ID=gene-HMPREF7215_1323;Name=HMPREF7215_1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1323 GCA_000177335.1|ADFP01000098.1 Genbank CDS 7435 9153 . + 0 ID=cds-EFB90032.1;Parent=gene-HMPREF7215_1323;Dbxref=NCBI_GP:EFB90032.1;Name=EFB90032.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05036;gbkey=CDS;locus_tag=HMPREF7215_1323;product=sporulation and cell division repeat protein;protein_id=EFB90032.1;transl_table=11 ##sequence-region ADFP01000097.1 1 53111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000097.1 Genbank region 1 53111 . + . ID=ADFP01000097.1:1..53111;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000097.1 Genbank gene 1 419 . - . ID=gene-HMPREF7215_0926;Name=HMPREF7215_0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0926;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000097.1 Genbank CDS 1 419 . - 0 ID=cds-EFB90033.1;Parent=gene-HMPREF7215_0926;Dbxref=NCBI_GP:EFB90033.1;Name=EFB90033.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01300;gbkey=CDS;locus_tag=HMPREF7215_0926;partial=true;product=putative Sua5/YciO/YrdC/YwlC family protein;protein_id=EFB90033.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 406 1533 . - . ID=gene-HMPREF7215_0927;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HMPREF7215_0927 GCA_000177335.1|ADFP01000097.1 Genbank CDS 406 1533 . - 0 ID=cds-EFB90034.1;Parent=gene-HMPREF7215_0927;Dbxref=NCBI_GP:EFB90034.1;Name=EFB90034.1;Note=identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449;gbkey=CDS;gene=tgt;locus_tag=HMPREF7215_0927;product=tRNA-guanine transglycosylase;protein_id=EFB90034.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 1526 2317 . - . ID=gene-HMPREF7215_0928;Name=HMPREF7215_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0928 GCA_000177335.1|ADFP01000097.1 Genbank CDS 1526 2317 . - 0 ID=cds-EFB90035.1;Parent=gene-HMPREF7215_0928;Dbxref=NCBI_GP:EFB90035.1;Name=EFB90035.1;Note=identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;locus_tag=HMPREF7215_0928;product=hydrolase%2C TatD family;protein_id=EFB90035.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 2314 3237 . - . ID=gene-HMPREF7215_0929;Name=HMPREF7215_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0929 GCA_000177335.1|ADFP01000097.1 Genbank CDS 2314 3237 . - 0 ID=cds-EFB90036.1;Parent=gene-HMPREF7215_0929;Dbxref=NCBI_GP:EFB90036.1;Name=EFB90036.1;gbkey=CDS;locus_tag=HMPREF7215_0929;product=hypothetical protein;protein_id=EFB90036.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 3404 4453 . + . ID=gene-HMPREF7215_0930;Name=HMPREF7215_0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0930 GCA_000177335.1|ADFP01000097.1 Genbank CDS 3404 4453 . + 0 ID=cds-EFB90037.1;Parent=gene-HMPREF7215_0930;Dbxref=NCBI_GP:EFB90037.1;Name=EFB90037.1;gbkey=CDS;locus_tag=HMPREF7215_0930;product=hypothetical protein;protein_id=EFB90037.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 4555 5559 . - . ID=gene-HMPREF7215_0931;Name=HMPREF7215_0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0931 GCA_000177335.1|ADFP01000097.1 Genbank CDS 4555 5559 . - 0 ID=cds-EFB90038.1;Parent=gene-HMPREF7215_0931;Dbxref=NCBI_GP:EFB90038.1;Name=EFB90038.1;Note=identified by match to protein family HMM PF08543;gbkey=CDS;locus_tag=HMPREF7215_0931;product=phosphomethylpyrimidine kinase;protein_id=EFB90038.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 5633 7588 . - . ID=gene-HMPREF7215_0932;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0932 GCA_000177335.1|ADFP01000097.1 Genbank CDS 5633 7588 . - 0 ID=cds-EFB90039.1;Parent=gene-HMPREF7215_0932;Dbxref=NCBI_GP:EFB90039.1;Name=EFB90039.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399;gbkey=CDS;gene=metG;locus_tag=HMPREF7215_0932;product=methionine--tRNA ligase;protein_id=EFB90039.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 7706 8521 . - . ID=gene-HMPREF7215_0933;Name=HMPREF7215_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0933 GCA_000177335.1|ADFP01000097.1 Genbank CDS 7706 8521 . - 0 ID=cds-EFB90040.1;Parent=gene-HMPREF7215_0933;Dbxref=NCBI_GP:EFB90040.1;Name=EFB90040.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;locus_tag=HMPREF7215_0933;product=S-adenosylmethionine-dependent methyltransferase%2C YraL family;protein_id=EFB90040.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 8543 8689 . - . ID=gene-HMPREF7215_0934;Name=HMPREF7215_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0934 GCA_000177335.1|ADFP01000097.1 Genbank CDS 8543 8689 . - 0 ID=cds-EFB90041.1;Parent=gene-HMPREF7215_0934;Dbxref=NCBI_GP:EFB90041.1;Name=EFB90041.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0934;product=hypothetical protein;protein_id=EFB90041.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 8686 9453 . - . ID=gene-HMPREF7215_0935;Name=HMPREF7215_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0935 GCA_000177335.1|ADFP01000097.1 Genbank CDS 8686 9453 . - 0 ID=cds-EFB90042.1;Parent=gene-HMPREF7215_0935;Dbxref=NCBI_GP:EFB90042.1;Name=EFB90042.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF7215_0935;product=methyltransferase domain protein;protein_id=EFB90042.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 9444 10205 . - . ID=gene-HMPREF7215_0936;Name=HMPREF7215_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0936 GCA_000177335.1|ADFP01000097.1 Genbank CDS 9444 10205 . - 0 ID=cds-EFB90043.1;Parent=gene-HMPREF7215_0936;Dbxref=NCBI_GP:EFB90043.1;Name=EFB90043.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02463;gbkey=CDS;locus_tag=HMPREF7215_0936;product=RecF/RecN/SMC N-terminal domain protein;protein_id=EFB90043.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 10205 12844 . - . ID=gene-HMPREF7215_0937;Name=HMPREF7215_0937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0937 GCA_000177335.1|ADFP01000097.1 Genbank CDS 10205 12844 . - 0 ID=cds-EFB90044.1;Parent=gene-HMPREF7215_0937;Dbxref=NCBI_GP:EFB90044.1;Name=EFB90044.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470;gbkey=CDS;locus_tag=HMPREF7215_0937;product=RecF/RecN/SMC N-terminal domain protein;protein_id=EFB90044.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 12819 14462 . - . ID=gene-HMPREF7215_0938;Name=HMPREF7215_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0938 GCA_000177335.1|ADFP01000097.1 Genbank CDS 12819 14462 . - 0 ID=cds-EFB90045.1;Parent=gene-HMPREF7215_0938;Dbxref=NCBI_GP:EFB90045.1;Name=EFB90045.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757;gbkey=CDS;locus_tag=HMPREF7215_0938;product=S1 RNA binding domain protein;protein_id=EFB90045.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 14530 15141 . - . ID=gene-HMPREF7215_0939;Name=HMPREF7215_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0939 GCA_000177335.1|ADFP01000097.1 Genbank CDS 14530 15141 . - 0 ID=cds-EFB90046.1;Parent=gene-HMPREF7215_0939;Dbxref=NCBI_GP:EFB90046.1;Name=EFB90046.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0939;product=radical SAM-linked protein;protein_id=EFB90046.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 15138 16955 . - . ID=gene-HMPREF7215_0940;Name=HMPREF7215_0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0940 GCA_000177335.1|ADFP01000097.1 Genbank CDS 15138 16955 . - 0 ID=cds-EFB90047.1;Parent=gene-HMPREF7215_0940;Dbxref=NCBI_GP:EFB90047.1;Name=EFB90047.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_0940;product=radical SAM domain protein;protein_id=EFB90047.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 17039 18193 . - . ID=gene-HMPREF7215_0941;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0941 GCA_000177335.1|ADFP01000097.1 Genbank CDS 17039 18193 . - 0 ID=cds-EFB90048.1;Parent=gene-HMPREF7215_0941;Dbxref=NCBI_GP:EFB90048.1;Name=EFB90048.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210;gbkey=CDS;gene=mrdB;locus_tag=HMPREF7215_0941;product=rod shape-determining protein RodA;protein_id=EFB90048.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 18193 18507 . - . ID=gene-HMPREF7215_0942;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0942 GCA_000177335.1|ADFP01000097.1 Genbank CDS 18193 18507 . - 0 ID=cds-EFB90049.1;Parent=gene-HMPREF7215_0942;Dbxref=NCBI_GP:EFB90049.1;Name=EFB90049.1;Note=identified by match to protein family HMM PF03776%3B match to protein family HMM TIGR01215;gbkey=CDS;gene=minE;locus_tag=HMPREF7215_0942;product=cell division topological specificity factor MinE;protein_id=EFB90049.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 18508 19650 . - . ID=gene-HMPREF7215_0943;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0943 GCA_000177335.1|ADFP01000097.1 Genbank CDS 18508 19650 . - 0 ID=cds-EFB90050.1;Parent=gene-HMPREF7215_0943;Dbxref=NCBI_GP:EFB90050.1;Name=EFB90050.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM TIGR01968;gbkey=CDS;gene=minD;locus_tag=HMPREF7215_0943;product=septum site-determining protein MinD;protein_id=EFB90050.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 19664 20332 . - . ID=gene-HMPREF7215_0944;Name=HMPREF7215_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0944 GCA_000177335.1|ADFP01000097.1 Genbank CDS 19664 20332 . - 0 ID=cds-EFB90051.1;Parent=gene-HMPREF7215_0944;Dbxref=NCBI_GP:EFB90051.1;Name=EFB90051.1;Note=identified by match to protein family HMM PF03775;gbkey=CDS;locus_tag=HMPREF7215_0944;product=putative septum site-determining protein MinC;protein_id=EFB90051.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 20366 22144 . - . ID=gene-HMPREF7215_0945;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0945 GCA_000177335.1|ADFP01000097.1 Genbank CDS 20366 22144 . - 0 ID=cds-EFB90052.1;Parent=gene-HMPREF7215_0945;Dbxref=NCBI_GP:EFB90052.1;Name=EFB90052.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423;gbkey=CDS;gene=mrdA;locus_tag=HMPREF7215_0945;product=penicillin-binding protein 2;protein_id=EFB90052.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 22125 22607 . - . ID=gene-HMPREF7215_0946;Name=HMPREF7215_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0946 GCA_000177335.1|ADFP01000097.1 Genbank CDS 22125 22607 . - 0 ID=cds-EFB90053.1;Parent=gene-HMPREF7215_0946;Dbxref=NCBI_GP:EFB90053.1;Name=EFB90053.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0946;product=hypothetical protein;protein_id=EFB90053.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 22604 23380 . - . ID=gene-HMPREF7215_0947;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0947 GCA_000177335.1|ADFP01000097.1 Genbank CDS 22604 23380 . - 0 ID=cds-EFB90054.1;Parent=gene-HMPREF7215_0947;Dbxref=NCBI_GP:EFB90054.1;Name=EFB90054.1;Note=identified by match to protein family HMM PF04085;gbkey=CDS;gene=mreC;locus_tag=HMPREF7215_0947;product=rod shape-determining protein MreC;protein_id=EFB90054.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 23393 24439 . - . ID=gene-HMPREF7215_0948;Name=HMPREF7215_0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0948 GCA_000177335.1|ADFP01000097.1 Genbank CDS 23393 24439 . - 0 ID=cds-EFB90055.1;Parent=gene-HMPREF7215_0948;Dbxref=NCBI_GP:EFB90055.1;Name=EFB90055.1;Note=identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904;gbkey=CDS;locus_tag=HMPREF7215_0948;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EFB90055.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 24487 25206 . - . ID=gene-HMPREF7215_0949;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0949 GCA_000177335.1|ADFP01000097.1 Genbank CDS 24487 25206 . - 0 ID=cds-EFB90056.1;Parent=gene-HMPREF7215_0949;Dbxref=NCBI_GP:EFB90056.1;Name=EFB90056.1;Note=identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;gene=radC;locus_tag=HMPREF7215_0949;product=DNA repair protein RadC;protein_id=EFB90056.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 25211 25840 . - . ID=gene-HMPREF7215_0950;Name=HMPREF7215_0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0950 GCA_000177335.1|ADFP01000097.1 Genbank CDS 25211 25840 . - 0 ID=cds-EFB90057.1;Parent=gene-HMPREF7215_0950;Dbxref=NCBI_GP:EFB90057.1;Name=EFB90057.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF7215_0950;product=metallo-beta-lactamase domain protein;protein_id=EFB90057.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 25837 26295 . - . ID=gene-HMPREF7215_0951;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=HMPREF7215_0951 GCA_000177335.1|ADFP01000097.1 Genbank CDS 25837 26295 . - 0 ID=cds-EFB90058.1;Parent=gene-HMPREF7215_0951;Dbxref=NCBI_GP:EFB90058.1;Name=EFB90058.1;Note=identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256;gbkey=CDS;gene=dtd;locus_tag=HMPREF7215_0951;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=EFB90058.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 26299 28749 . - . ID=gene-HMPREF7215_0952;Name=HMPREF7215_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0952 GCA_000177335.1|ADFP01000097.1 Genbank CDS 26299 28749 . - 0 ID=cds-EFB90059.1;Parent=gene-HMPREF7215_0952;Dbxref=NCBI_GP:EFB90059.1;Name=EFB90059.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;locus_tag=HMPREF7215_0952;product=RelA/SpoT family protein;protein_id=EFB90059.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 28823 30490 . - . ID=gene-HMPREF7215_0953;Name=HMPREF7215_0953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0953 GCA_000177335.1|ADFP01000097.1 Genbank CDS 28823 30490 . - 0 ID=cds-EFB90060.1;Parent=gene-HMPREF7215_0953;Dbxref=NCBI_GP:EFB90060.1;Name=EFB90060.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF7215_0953;product=putative single-stranded-DNA-specific exonuclease RecJ;protein_id=EFB90060.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 30550 30891 . - . ID=gene-HMPREF7215_0954;Name=HMPREF7215_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0954 GCA_000177335.1|ADFP01000097.1 Genbank CDS 30550 30891 . - 0 ID=cds-EFB90061.1;Parent=gene-HMPREF7215_0954;Dbxref=NCBI_GP:EFB90061.1;Name=EFB90061.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0954;product=hypothetical protein;protein_id=EFB90061.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 31176 32054 . - . ID=gene-HMPREF7215_0955;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0955 GCA_000177335.1|ADFP01000097.1 Genbank CDS 31176 32054 . - 0 ID=cds-EFB90062.1;Parent=gene-HMPREF7215_0955;Dbxref=NCBI_GP:EFB90062.1;Name=EFB90062.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF;locus_tag=HMPREF7215_0955;product=export membrane protein SecF;protein_id=EFB90062.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 32069 33472 . - . ID=gene-HMPREF7215_0956;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0956 GCA_000177335.1|ADFP01000097.1 Genbank CDS 32069 33472 . - 0 ID=cds-EFB90063.1;Parent=gene-HMPREF7215_0956;Dbxref=NCBI_GP:EFB90063.1;Name=EFB90063.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD;locus_tag=HMPREF7215_0956;product=export membrane protein SecD;protein_id=EFB90063.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 33560 34018 . - . ID=gene-HMPREF7215_0957;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0957 GCA_000177335.1|ADFP01000097.1 Genbank CDS 33560 34018 . - 0 ID=cds-EFB90064.1;Parent=gene-HMPREF7215_0957;Dbxref=NCBI_GP:EFB90064.1;Name=EFB90064.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC;locus_tag=HMPREF7215_0957;product=preprotein translocase%2C YajC subunit;protein_id=EFB90064.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 34119 34799 . - . ID=gene-HMPREF7215_0958;Name=HMPREF7215_0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0958 GCA_000177335.1|ADFP01000097.1 Genbank CDS 34119 34799 . - 0 ID=cds-EFB90065.1;Parent=gene-HMPREF7215_0958;Dbxref=NCBI_GP:EFB90065.1;Name=EFB90065.1;Note=identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971;gbkey=CDS;locus_tag=HMPREF7215_0958;product=CoA binding domain protein;protein_id=EFB90065.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 34807 36087 . - . ID=gene-HMPREF7215_0959;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF7215_0959 GCA_000177335.1|ADFP01000097.1 Genbank CDS 34807 36087 . - 0 ID=cds-EFB90066.1;Parent=gene-HMPREF7215_0959;Dbxref=NCBI_GP:EFB90066.1;Name=EFB90066.1;Note=identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060;gbkey=CDS;gene=eno;locus_tag=HMPREF7215_0959;product=phosphopyruvate hydratase;protein_id=EFB90066.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 36151 36435 . - . ID=gene-HMPREF7215_0960;Name=HMPREF7215_0960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0960 GCA_000177335.1|ADFP01000097.1 Genbank CDS 36151 36435 . - 0 ID=cds-EFB90067.1;Parent=gene-HMPREF7215_0960;Dbxref=NCBI_GP:EFB90067.1;Name=EFB90067.1;Note=identified by match to protein family HMM PF01479;gbkey=CDS;locus_tag=HMPREF7215_0960;product=S4 domain protein;protein_id=EFB90067.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 36634 36867 . + . ID=gene-HMPREF7215_0962;Name=HMPREF7215_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0962 GCA_000177335.1|ADFP01000097.1 Genbank CDS 36634 36867 . + 0 ID=cds-EFB90068.1;Parent=gene-HMPREF7215_0962;Dbxref=NCBI_GP:EFB90068.1;Name=EFB90068.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0962;product=hypothetical protein;protein_id=EFB90068.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 36864 38042 . - . ID=gene-HMPREF7215_0961;Name=HMPREF7215_0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0961 GCA_000177335.1|ADFP01000097.1 Genbank CDS 36864 38042 . - 0 ID=cds-EFB90069.1;Parent=gene-HMPREF7215_0961;Dbxref=NCBI_GP:EFB90069.1;Name=EFB90069.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_0961;product=amidohydrolase family protein;protein_id=EFB90069.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 38096 39121 . - . ID=gene-HMPREF7215_0963;Name=HMPREF7215_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0963 GCA_000177335.1|ADFP01000097.1 Genbank CDS 38096 39121 . - 0 ID=cds-EFB90070.1;Parent=gene-HMPREF7215_0963;Dbxref=NCBI_GP:EFB90070.1;Name=EFB90070.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0963;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90070.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 39073 40062 . - . ID=gene-HMPREF7215_0964;Name=HMPREF7215_0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0964 GCA_000177335.1|ADFP01000097.1 Genbank CDS 39073 40062 . - 0 ID=cds-EFB90071.1;Parent=gene-HMPREF7215_0964;Dbxref=NCBI_GP:EFB90071.1;Name=EFB90071.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0964;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90071.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 40071 40994 . - . ID=gene-HMPREF7215_0965;Name=HMPREF7215_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0965 GCA_000177335.1|ADFP01000097.1 Genbank CDS 40071 40994 . - 0 ID=cds-EFB90072.1;Parent=gene-HMPREF7215_0965;Dbxref=NCBI_GP:EFB90072.1;Name=EFB90072.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0965;product=ABC transporter%2C permease protein;protein_id=EFB90072.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 41007 41969 . - . ID=gene-HMPREF7215_0966;Name=HMPREF7215_0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0966 GCA_000177335.1|ADFP01000097.1 Genbank CDS 41007 41969 . - 0 ID=cds-EFB90073.1;Parent=gene-HMPREF7215_0966;Dbxref=NCBI_GP:EFB90073.1;Name=EFB90073.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0966;product=ABC transporter%2C permease protein;protein_id=EFB90073.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 42051 43640 . - . ID=gene-HMPREF7215_0967;Name=HMPREF7215_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0967 GCA_000177335.1|ADFP01000097.1 Genbank CDS 42051 43640 . - 0 ID=cds-EFB90074.1;Parent=gene-HMPREF7215_0967;Dbxref=NCBI_GP:EFB90074.1;Name=EFB90074.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_0967;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB90074.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 43856 45598 . - . ID=gene-HMPREF7215_0968;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0968 GCA_000177335.1|ADFP01000097.1 Genbank CDS 43856 45598 . - 0 ID=cds-EFB90075.1;Parent=gene-HMPREF7215_0968;Dbxref=NCBI_GP:EFB90075.1;Name=EFB90075.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391;gbkey=CDS;gene=dnaG;locus_tag=HMPREF7215_0968;product=DNA primase;protein_id=EFB90075.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 45711 47789 . - . ID=gene-HMPREF7215_0969;Name=HMPREF7215_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0969 GCA_000177335.1|ADFP01000097.1 Genbank CDS 45711 47789 . - 0 ID=cds-EFB90076.1;Parent=gene-HMPREF7215_0969;Dbxref=NCBI_GP:EFB90076.1;Name=EFB90076.1;Note=identified by match to protein family HMM PF03030%3B match to protein family HMM TIGR01104;gbkey=CDS;locus_tag=HMPREF7215_0969;product=V-type H(+)-translocating pyrophosphatase;protein_id=EFB90076.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 47803 47964 . - . ID=gene-HMPREF7215_0970;Name=HMPREF7215_0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0970 GCA_000177335.1|ADFP01000097.1 Genbank CDS 47803 47964 . - 0 ID=cds-EFB90077.1;Parent=gene-HMPREF7215_0970;Dbxref=NCBI_GP:EFB90077.1;Name=EFB90077.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0970;product=hypothetical protein;protein_id=EFB90077.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 47961 49037 . - . ID=gene-HMPREF7215_0971;Name=HMPREF7215_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0971 GCA_000177335.1|ADFP01000097.1 Genbank CDS 47961 49037 . - 0 ID=cds-EFB90078.1;Parent=gene-HMPREF7215_0971;Dbxref=NCBI_GP:EFB90078.1;Name=EFB90078.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;locus_tag=HMPREF7215_0971;product=Creatinase;protein_id=EFB90078.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 49126 49401 . - . ID=gene-HMPREF7215_0972;Name=HMPREF7215_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0972 GCA_000177335.1|ADFP01000097.1 Genbank CDS 49126 49401 . - 0 ID=cds-EFB90079.1;Parent=gene-HMPREF7215_0972;Dbxref=NCBI_GP:EFB90079.1;Name=EFB90079.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=HMPREF7215_0972;product=acetyltransferase%2C GNAT family;protein_id=EFB90079.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 49553 50110 . - . ID=gene-HMPREF7215_0973;Name=HMPREF7215_0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0973 GCA_000177335.1|ADFP01000097.1 Genbank CDS 49553 50110 . - 0 ID=cds-EFB90080.1;Parent=gene-HMPREF7215_0973;Dbxref=NCBI_GP:EFB90080.1;Name=EFB90080.1;Note=identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=HMPREF7215_0973;product=BioY family protein;protein_id=EFB90080.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 50331 51506 . + . ID=gene-HMPREF7215_0974;Name=HMPREF7215_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0974 GCA_000177335.1|ADFP01000097.1 Genbank CDS 50331 51506 . + 0 ID=cds-EFB90081.1;Parent=gene-HMPREF7215_0974;Dbxref=NCBI_GP:EFB90081.1;Name=EFB90081.1;Note=identified by match to protein family HMM PF07973;gbkey=CDS;locus_tag=HMPREF7215_0974;product=threonine/alanine tRNA ligase second additional domain protein;protein_id=EFB90081.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 51503 51664 . + . ID=gene-HMPREF7215_0976;Name=HMPREF7215_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0976 GCA_000177335.1|ADFP01000097.1 Genbank CDS 51503 51664 . + 0 ID=cds-EFB90082.1;Parent=gene-HMPREF7215_0976;Dbxref=NCBI_GP:EFB90082.1;Name=EFB90082.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0976;product=hypothetical protein;protein_id=EFB90082.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 51661 52116 . - . ID=gene-HMPREF7215_0975;Name=HMPREF7215_0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0975 GCA_000177335.1|ADFP01000097.1 Genbank CDS 51661 52116 . - 0 ID=cds-EFB90083.1;Parent=gene-HMPREF7215_0975;Dbxref=NCBI_GP:EFB90083.1;Name=EFB90083.1;gbkey=CDS;locus_tag=HMPREF7215_0975;product=arsenical resistance operon trans-acting repressor ArsD;protein_id=EFB90083.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 52221 52946 . - . ID=gene-HMPREF7215_0977;Name=HMPREF7215_0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0977 GCA_000177335.1|ADFP01000097.1 Genbank CDS 52221 52946 . - 0 ID=cds-EFB90084.1;Parent=gene-HMPREF7215_0977;Dbxref=NCBI_GP:EFB90084.1;Name=EFB90084.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;locus_tag=HMPREF7215_0977;product=HAD hydrolase%2C family IA%2C variant 3;protein_id=EFB90084.1;transl_table=11 GCA_000177335.1|ADFP01000097.1 Genbank gene 52986 53111 . + . ID=gene-HMPREF7215_0978;Name=HMPREF7215_0978;end_range=53111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0978;partial=true GCA_000177335.1|ADFP01000097.1 Genbank CDS 52986 53111 . + 0 ID=cds-EFB90085.1;Parent=gene-HMPREF7215_0978;Dbxref=NCBI_GP:EFB90085.1;Name=EFB90085.1;Note=identified by glimmer%3B putative;end_range=53111,.;gbkey=CDS;locus_tag=HMPREF7215_0978;partial=true;product=hypothetical protein;protein_id=EFB90085.1;transl_table=11 ##sequence-region ADFP01000096.1 1 1831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000096.1 Genbank region 1 1831 . + . ID=ADFP01000096.1:1..1831;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000096.1 Genbank gene 1 116 . + . ID=gene-HMPREF7215_0263;Name=HMPREF7215_0263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0263;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000096.1 Genbank CDS 1 116 . + 2 ID=cds-EFB90086.1;Parent=gene-HMPREF7215_0263;Dbxref=NCBI_GP:EFB90086.1;Name=EFB90086.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0263;partial=true;product=hypothetical protein;protein_id=EFB90086.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000096.1 Genbank gene 166 1275 . - . ID=gene-HMPREF7215_0264;Name=HMPREF7215_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0264 GCA_000177335.1|ADFP01000096.1 Genbank CDS 166 1275 . - 0 ID=cds-EFB90087.1;Parent=gene-HMPREF7215_0264;Dbxref=NCBI_GP:EFB90087.1;Name=EFB90087.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121;gbkey=CDS;locus_tag=HMPREF7215_0264;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=EFB90087.1;transl_table=11 GCA_000177335.1|ADFP01000096.1 Genbank gene 1336 1551 . + . ID=gene-HMPREF7215_0265;Name=HMPREF7215_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0265 GCA_000177335.1|ADFP01000096.1 Genbank CDS 1336 1551 . + 0 ID=cds-EFB90088.1;Parent=gene-HMPREF7215_0265;Dbxref=NCBI_GP:EFB90088.1;Name=EFB90088.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0265;product=hypothetical protein;protein_id=EFB90088.1;transl_table=11 GCA_000177335.1|ADFP01000096.1 Genbank gene 1718 1831 . + . ID=gene-HMPREF7215_0266;Name=HMPREF7215_0266;end_range=1831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0266;partial=true GCA_000177335.1|ADFP01000096.1 Genbank CDS 1718 1831 . + 0 ID=cds-EFB90089.1;Parent=gene-HMPREF7215_0266;Dbxref=NCBI_GP:EFB90089.1;Name=EFB90089.1;Note=identified by glimmer%3B putative;end_range=1831,.;gbkey=CDS;locus_tag=HMPREF7215_0266;partial=true;product=hypothetical protein;protein_id=EFB90089.1;transl_table=11 ##sequence-region ADFP01000095.1 1 30692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000095.1 Genbank region 1 30692 . + . ID=ADFP01000095.1:1..30692;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000095.1 Genbank gene 74 1471 . - . ID=gene-HMPREF7215_1811;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1811 GCA_000177335.1|ADFP01000095.1 Genbank CDS 74 1471 . - 0 ID=cds-EFB90090.1;Parent=gene-HMPREF7215_1811;Dbxref=NCBI_GP:EFB90090.1;Name=EFB90090.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR02033;gbkey=CDS;gene=hydA;locus_tag=HMPREF7215_1811;product=dihydropyrimidinase;protein_id=EFB90090.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 1639 2373 . - . ID=gene-HMPREF7215_1812;Name=HMPREF7215_1812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1812 GCA_000177335.1|ADFP01000095.1 Genbank CDS 1639 2373 . - 0 ID=cds-EFB90091.1;Parent=gene-HMPREF7215_1812;Dbxref=NCBI_GP:EFB90091.1;Name=EFB90091.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=HMPREF7215_1812;product=N-carbamoylsarcosine amidase;protein_id=EFB90091.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 2407 2568 . + . ID=gene-HMPREF7215_1813;Name=HMPREF7215_1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1813 GCA_000177335.1|ADFP01000095.1 Genbank CDS 2407 2568 . + 0 ID=cds-EFB90092.1;Parent=gene-HMPREF7215_1813;Dbxref=NCBI_GP:EFB90092.1;Name=EFB90092.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1813;product=hypothetical protein;protein_id=EFB90092.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 2678 4228 . - . ID=gene-HMPREF7215_1814;Name=HMPREF7215_1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1814 GCA_000177335.1|ADFP01000095.1 Genbank CDS 2678 4228 . - 0 ID=cds-EFB90093.1;Parent=gene-HMPREF7215_1814;Dbxref=NCBI_GP:EFB90093.1;Name=EFB90093.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1814;product=hypothetical protein;protein_id=EFB90093.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 4636 5169 . - . ID=gene-HMPREF7215_1815;Name=HMPREF7215_1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1815 GCA_000177335.1|ADFP01000095.1 Genbank CDS 4636 5169 . - 0 ID=cds-EFB90094.1;Parent=gene-HMPREF7215_1815;Dbxref=NCBI_GP:EFB90094.1;Name=EFB90094.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=HMPREF7215_1815;product=acetyltransferase%2C GNAT family;protein_id=EFB90094.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 5498 6403 . + . ID=gene-HMPREF7215_1816;Name=HMPREF7215_1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1816 GCA_000177335.1|ADFP01000095.1 Genbank CDS 5498 6403 . + 0 ID=cds-EFB90095.1;Parent=gene-HMPREF7215_1816;Dbxref=NCBI_GP:EFB90095.1;Name=EFB90095.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=HMPREF7215_1816;product=cation diffusion facilitator family transporter;protein_id=EFB90095.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 6519 7676 . + . ID=gene-HMPREF7215_1817;Name=HMPREF7215_1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1817 GCA_000177335.1|ADFP01000095.1 Genbank CDS 6519 7676 . + 0 ID=cds-EFB90096.1;Parent=gene-HMPREF7215_1817;Dbxref=NCBI_GP:EFB90096.1;Name=EFB90096.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF7215_1817;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFB90096.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 7868 9061 . - . ID=gene-HMPREF7215_1818;Name=HMPREF7215_1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1818 GCA_000177335.1|ADFP01000095.1 Genbank CDS 7868 9061 . - 0 ID=cds-EFB90097.1;Parent=gene-HMPREF7215_1818;Dbxref=NCBI_GP:EFB90097.1;Name=EFB90097.1;Note=identified by match to protein family HMM PF05684;gbkey=CDS;locus_tag=HMPREF7215_1818;product=hypothetical protein;protein_id=EFB90097.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 9146 9271 . + . ID=gene-HMPREF7215_1819;Name=HMPREF7215_1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1819 GCA_000177335.1|ADFP01000095.1 Genbank CDS 9146 9271 . + 0 ID=cds-EFB90098.1;Parent=gene-HMPREF7215_1819;Dbxref=NCBI_GP:EFB90098.1;Name=EFB90098.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1819;product=hypothetical protein;protein_id=EFB90098.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 9434 10624 . - . ID=gene-HMPREF7215_1820;Name=HMPREF7215_1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1820 GCA_000177335.1|ADFP01000095.1 Genbank CDS 9434 10624 . - 0 ID=cds-EFB90099.1;Parent=gene-HMPREF7215_1820;Dbxref=NCBI_GP:EFB90099.1;Name=EFB90099.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_1820;product=aminotransferase%2C class I/II;protein_id=EFB90099.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 10808 11686 . + . ID=gene-HMPREF7215_1821;Name=HMPREF7215_1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1821 GCA_000177335.1|ADFP01000095.1 Genbank CDS 10808 11686 . + 0 ID=cds-EFB90100.1;Parent=gene-HMPREF7215_1821;Dbxref=NCBI_GP:EFB90100.1;Name=EFB90100.1;Note=identified by match to protein family HMM PF03446%3B match to protein family HMM PF03807;gbkey=CDS;locus_tag=HMPREF7215_1821;product=phosphogluconate dehydrogenase (decarboxylating)%2C NAD binding domain protein;protein_id=EFB90100.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 11714 11839 . - . ID=gene-HMPREF7215_1822;Name=HMPREF7215_1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1822 GCA_000177335.1|ADFP01000095.1 Genbank CDS 11714 11839 . - 0 ID=cds-EFB90101.1;Parent=gene-HMPREF7215_1822;Dbxref=NCBI_GP:EFB90101.1;Name=EFB90101.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1822;product=hypothetical protein;protein_id=EFB90101.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 11833 12210 . + . ID=gene-HMPREF7215_1823;Name=HMPREF7215_1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1823 GCA_000177335.1|ADFP01000095.1 Genbank CDS 11833 12210 . + 0 ID=cds-EFB90102.1;Parent=gene-HMPREF7215_1823;Dbxref=NCBI_GP:EFB90102.1;Name=EFB90102.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF7215_1823;product=transcriptional regulator%2C Fur family;protein_id=EFB90102.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 12217 12864 . + . ID=gene-HMPREF7215_1824;Name=HMPREF7215_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1824 GCA_000177335.1|ADFP01000095.1 Genbank CDS 12217 12864 . + 0 ID=cds-EFB90103.1;Parent=gene-HMPREF7215_1824;Dbxref=NCBI_GP:EFB90103.1;Name=EFB90103.1;Note=identified by match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF7215_1824;product=Rubrerythrin;protein_id=EFB90103.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 13205 13900 . - . ID=gene-HMPREF7215_1825;Name=HMPREF7215_1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1825 GCA_000177335.1|ADFP01000095.1 Genbank CDS 13205 13900 . - 0 ID=cds-EFB90104.1;Parent=gene-HMPREF7215_1825;Dbxref=NCBI_GP:EFB90104.1;Name=EFB90104.1;Note=identified by match to protein family HMM PF04029;gbkey=CDS;locus_tag=HMPREF7215_1825;product=2-phosphosulfolactate phosphatase;protein_id=EFB90104.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 13893 14024 . + . ID=gene-HMPREF7215_1826;Name=HMPREF7215_1826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1826 GCA_000177335.1|ADFP01000095.1 Genbank CDS 13893 14024 . + 0 ID=cds-EFB90105.1;Parent=gene-HMPREF7215_1826;Dbxref=NCBI_GP:EFB90105.1;Name=EFB90105.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1826;product=hypothetical protein;protein_id=EFB90105.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 14073 14186 . + . ID=gene-HMPREF7215_1827;Name=HMPREF7215_1827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1827 GCA_000177335.1|ADFP01000095.1 Genbank CDS 14073 14186 . + 0 ID=cds-EFB90106.1;Parent=gene-HMPREF7215_1827;Dbxref=NCBI_GP:EFB90106.1;Name=EFB90106.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1827;product=hypothetical protein;protein_id=EFB90106.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 14183 15766 . + . ID=gene-HMPREF7215_1828;Name=HMPREF7215_1828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1828 GCA_000177335.1|ADFP01000095.1 Genbank CDS 14183 15766 . + 0 ID=cds-EFB90107.1;Parent=gene-HMPREF7215_1828;Dbxref=NCBI_GP:EFB90107.1;Name=EFB90107.1;Note=identified by match to protein family HMM PF07905;gbkey=CDS;locus_tag=HMPREF7215_1828;product=purine catabolism regulatory protein-like family;protein_id=EFB90107.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 15963 16652 . + . ID=gene-HMPREF7215_1829;Name=HMPREF7215_1829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1829 GCA_000177335.1|ADFP01000095.1 Genbank CDS 15963 16652 . + 0 ID=cds-EFB90108.1;Parent=gene-HMPREF7215_1829;Dbxref=NCBI_GP:EFB90108.1;Name=EFB90108.1;Note=identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02429;gbkey=CDS;locus_tag=HMPREF7215_1829;product=3-oxoacid CoA-transferase%2C A subunit;protein_id=EFB90108.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 16636 17334 . + . ID=gene-HMPREF7215_1830;Name=HMPREF7215_1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1830 GCA_000177335.1|ADFP01000095.1 Genbank CDS 16636 17334 . + 0 ID=cds-EFB90109.1;Parent=gene-HMPREF7215_1830;Dbxref=NCBI_GP:EFB90109.1;Name=EFB90109.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02428;gbkey=CDS;locus_tag=HMPREF7215_1830;product=3-oxoacid CoA-transferase%2C B subunit;protein_id=EFB90109.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 17336 18520 . + . ID=gene-HMPREF7215_1831;Name=HMPREF7215_1831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1831 GCA_000177335.1|ADFP01000095.1 Genbank CDS 17336 18520 . + 0 ID=cds-EFB90110.1;Parent=gene-HMPREF7215_1831;Dbxref=NCBI_GP:EFB90110.1;Name=EFB90110.1;Note=identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930;gbkey=CDS;locus_tag=HMPREF7215_1831;product=acetyl-CoA C-acetyltransferase;protein_id=EFB90110.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 18654 19640 . + . ID=gene-HMPREF7215_1832;Name=HMPREF7215_1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1832 GCA_000177335.1|ADFP01000095.1 Genbank CDS 18654 19640 . + 0 ID=cds-EFB90111.1;Parent=gene-HMPREF7215_1832;Dbxref=NCBI_GP:EFB90111.1;Name=EFB90111.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_1832;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB90111.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 19798 21717 . + . ID=gene-HMPREF7215_1833;Name=HMPREF7215_1833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1833 GCA_000177335.1|ADFP01000095.1 Genbank CDS 19798 21717 . + 0 ID=cds-EFB90112.1;Parent=gene-HMPREF7215_1833;Dbxref=NCBI_GP:EFB90112.1;Name=EFB90112.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;locus_tag=HMPREF7215_1833;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=EFB90112.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 21729 22631 . + . ID=gene-HMPREF7215_1835;Name=HMPREF7215_1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1835 GCA_000177335.1|ADFP01000095.1 Genbank CDS 21729 22631 . + 0 ID=cds-EFB90113.1;Parent=gene-HMPREF7215_1835;Dbxref=NCBI_GP:EFB90113.1;Name=EFB90113.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF03446;gbkey=CDS;locus_tag=HMPREF7215_1835;product=phosphogluconate dehydrogenase (decarboxylating)%2C NAD binding domain protein;protein_id=EFB90113.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 22590 22880 . - . ID=gene-HMPREF7215_1834;Name=HMPREF7215_1834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1834 GCA_000177335.1|ADFP01000095.1 Genbank CDS 22590 22880 . - 0 ID=cds-EFB90114.1;Parent=gene-HMPREF7215_1834;Dbxref=NCBI_GP:EFB90114.1;Name=EFB90114.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1834;product=hypothetical protein;protein_id=EFB90114.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 22874 24856 . - . ID=gene-HMPREF7215_1836;Name=HMPREF7215_1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1836 GCA_000177335.1|ADFP01000095.1 Genbank CDS 22874 24856 . - 0 ID=cds-EFB90115.1;Parent=gene-HMPREF7215_1836;Dbxref=NCBI_GP:EFB90115.1;Name=EFB90115.1;gbkey=CDS;locus_tag=HMPREF7215_1836;product=Tat pathway signal sequence domain protein;protein_id=EFB90115.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 24860 25708 . - . ID=gene-HMPREF7215_1837;Name=HMPREF7215_1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1837 GCA_000177335.1|ADFP01000095.1 Genbank CDS 24860 25708 . - 0 ID=cds-EFB90116.1;Parent=gene-HMPREF7215_1837;Dbxref=NCBI_GP:EFB90116.1;Name=EFB90116.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;locus_tag=HMPREF7215_1837;product=endonuclease/exonuclease/phosphatase family protein;protein_id=EFB90116.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 25745 25873 . - . ID=gene-HMPREF7215_1838;Name=HMPREF7215_1838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1838 GCA_000177335.1|ADFP01000095.1 Genbank CDS 25745 25873 . - 0 ID=cds-EFB90117.1;Parent=gene-HMPREF7215_1838;Dbxref=NCBI_GP:EFB90117.1;Name=EFB90117.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1838;product=hypothetical protein;protein_id=EFB90117.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 25878 26249 . + . ID=gene-HMPREF7215_1840;Name=HMPREF7215_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1840 GCA_000177335.1|ADFP01000095.1 Genbank CDS 25878 26249 . + 0 ID=cds-EFB90118.1;Parent=gene-HMPREF7215_1840;Dbxref=NCBI_GP:EFB90118.1;Name=EFB90118.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;locus_tag=HMPREF7215_1840;product=putative endoribonuclease L-PSP;protein_id=EFB90118.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 26242 26370 . - . ID=gene-HMPREF7215_1839;Name=HMPREF7215_1839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1839 GCA_000177335.1|ADFP01000095.1 Genbank CDS 26242 26370 . - 0 ID=cds-EFB90119.1;Parent=gene-HMPREF7215_1839;Dbxref=NCBI_GP:EFB90119.1;Name=EFB90119.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1839;product=hypothetical protein;protein_id=EFB90119.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 26459 27208 . - . ID=gene-HMPREF7215_1841;Name=HMPREF7215_1841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1841 GCA_000177335.1|ADFP01000095.1 Genbank CDS 26459 27208 . - 0 ID=cds-EFB90120.1;Parent=gene-HMPREF7215_1841;Dbxref=NCBI_GP:EFB90120.1;Name=EFB90120.1;gbkey=CDS;locus_tag=HMPREF7215_1841;product=hypothetical protein;protein_id=EFB90120.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 27273 28157 . + . ID=gene-HMPREF7215_1842;Name=HMPREF7215_1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1842 GCA_000177335.1|ADFP01000095.1 Genbank CDS 27273 28157 . + 0 ID=cds-EFB90121.1;Parent=gene-HMPREF7215_1842;Dbxref=NCBI_GP:EFB90121.1;Name=EFB90121.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF7215_1842;product=hypothetical protein;protein_id=EFB90121.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 28375 29769 . + . ID=gene-HMPREF7215_1843;Name=HMPREF7215_1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1843 GCA_000177335.1|ADFP01000095.1 Genbank CDS 28375 29769 . + 0 ID=cds-EFB90122.1;Parent=gene-HMPREF7215_1843;Dbxref=NCBI_GP:EFB90122.1;Name=EFB90122.1;Note=identified by match to protein family HMM PF01637%3B match to protein family HMM PF03008;gbkey=CDS;locus_tag=HMPREF7215_1843;product=hypothetical protein;protein_id=EFB90122.1;transl_table=11 GCA_000177335.1|ADFP01000095.1 Genbank gene 29908 30692 . - . ID=gene-HMPREF7215_1844;Name=HMPREF7215_1844;end_range=30692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1844;partial=true GCA_000177335.1|ADFP01000095.1 Genbank CDS 29908 30692 . - 2 ID=cds-EFB90123.1;Parent=gene-HMPREF7215_1844;Dbxref=NCBI_GP:EFB90123.1;Name=EFB90123.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01554;end_range=30692,.;gbkey=CDS;locus_tag=HMPREF7215_1844;partial=true;product=MATE domain protein;protein_id=EFB90123.1;transl_table=11 ##sequence-region ADFP01000094.1 1 7074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000094.1 Genbank region 1 7074 . + . ID=ADFP01000094.1:1..7074;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000094.1 Genbank gene 17 523 . + . ID=gene-HMPREF7215_1486;Name=HMPREF7215_1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1486 GCA_000177335.1|ADFP01000094.1 Genbank CDS 17 523 . + 0 ID=cds-EFB90124.1;Parent=gene-HMPREF7215_1486;Dbxref=NCBI_GP:EFB90124.1;Name=EFB90124.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1486;product=hypothetical protein;protein_id=EFB90124.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 520 1689 . + . ID=gene-HMPREF7215_1487;Name=HMPREF7215_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1487 GCA_000177335.1|ADFP01000094.1 Genbank CDS 520 1689 . + 0 ID=cds-EFB90125.1;Parent=gene-HMPREF7215_1487;Dbxref=NCBI_GP:EFB90125.1;Name=EFB90125.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;locus_tag=HMPREF7215_1487;product=oxidoreductase%2C nitrogenase component 1;protein_id=EFB90125.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 1696 2787 . + . ID=gene-HMPREF7215_1488;Name=HMPREF7215_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1488 GCA_000177335.1|ADFP01000094.1 Genbank CDS 1696 2787 . + 0 ID=cds-EFB90126.1;Parent=gene-HMPREF7215_1488;Dbxref=NCBI_GP:EFB90126.1;Name=EFB90126.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_1488;product=periplasmic binding protein;protein_id=EFB90126.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 2829 3911 . + . ID=gene-HMPREF7215_1489;Name=HMPREF7215_1489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1489 GCA_000177335.1|ADFP01000094.1 Genbank CDS 2829 3911 . + 0 ID=cds-EFB90127.1;Parent=gene-HMPREF7215_1489;Dbxref=NCBI_GP:EFB90127.1;Name=EFB90127.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_1489;product=periplasmic binding protein;protein_id=EFB90127.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 3911 4918 . + . ID=gene-HMPREF7215_1490;Name=HMPREF7215_1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1490 GCA_000177335.1|ADFP01000094.1 Genbank CDS 3911 4918 . + 0 ID=cds-EFB90128.1;Parent=gene-HMPREF7215_1490;Dbxref=NCBI_GP:EFB90128.1;Name=EFB90128.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF7215_1490;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFB90128.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 4915 5709 . + . ID=gene-HMPREF7215_1491;Name=HMPREF7215_1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1491 GCA_000177335.1|ADFP01000094.1 Genbank CDS 4915 5709 . + 0 ID=cds-EFB90129.1;Parent=gene-HMPREF7215_1491;Dbxref=NCBI_GP:EFB90129.1;Name=EFB90129.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1491;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90129.1;transl_table=11 GCA_000177335.1|ADFP01000094.1 Genbank gene 6008 6874 . - . ID=gene-HMPREF7215_1492;Name=HMPREF7215_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1492 GCA_000177335.1|ADFP01000094.1 Genbank CDS 6008 6874 . - 0 ID=cds-EFB90130.1;Parent=gene-HMPREF7215_1492;Dbxref=NCBI_GP:EFB90130.1;Name=EFB90130.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1492;product=hypothetical protein;protein_id=EFB90130.1;transl_table=11 ##sequence-region ADFP01000093.1 1 46354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000093.1 Genbank region 1 46354 . + . ID=ADFP01000093.1:1..46354;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000093.1 Genbank gene 7 297 . + . ID=gene-HMPREF7215_0853;Name=HMPREF7215_0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0853 GCA_000177335.1|ADFP01000093.1 Genbank CDS 7 297 . + 0 ID=cds-EFB90131.1;Parent=gene-HMPREF7215_0853;Dbxref=NCBI_GP:EFB90131.1;Name=EFB90131.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02910;gbkey=CDS;locus_tag=HMPREF7215_0853;product=fumarate reductase/succinate dehydrogenase flavoprotein domain protein;protein_id=EFB90131.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 294 998 . + . ID=gene-HMPREF7215_0854;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0854 GCA_000177335.1|ADFP01000093.1 Genbank CDS 294 998 . + 0 ID=cds-EFB90132.1;Parent=gene-HMPREF7215_0854;Dbxref=NCBI_GP:EFB90132.1;Name=EFB90132.1;Note=identified by match to protein family HMM TIGR00384;gbkey=CDS;gene=sdhB;locus_tag=HMPREF7215_0854;product=succinate dehydrogenase iron-sulfur subunit;protein_id=EFB90132.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 1106 1792 . - . ID=gene-HMPREF7215_0855;Name=HMPREF7215_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0855 GCA_000177335.1|ADFP01000093.1 Genbank CDS 1106 1792 . - 0 ID=cds-EFB90133.1;Parent=gene-HMPREF7215_0855;Dbxref=NCBI_GP:EFB90133.1;Name=EFB90133.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0855;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90133.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 1794 3002 . - . ID=gene-HMPREF7215_0856;Name=HMPREF7215_0856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0856 GCA_000177335.1|ADFP01000093.1 Genbank CDS 1794 3002 . - 0 ID=cds-EFB90134.1;Parent=gene-HMPREF7215_0856;Dbxref=NCBI_GP:EFB90134.1;Name=EFB90134.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF7215_0856;product=efflux ABC transporter%2C permease protein;protein_id=EFB90134.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 3004 3423 . - . ID=gene-HMPREF7215_0857;Name=HMPREF7215_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0857 GCA_000177335.1|ADFP01000093.1 Genbank CDS 3004 3423 . - 0 ID=cds-EFB90135.1;Parent=gene-HMPREF7215_0857;Dbxref=NCBI_GP:EFB90135.1;Name=EFB90135.1;gbkey=CDS;locus_tag=HMPREF7215_0857;product=hypothetical protein;protein_id=EFB90135.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 3442 3855 . - . ID=gene-HMPREF7215_0858;Name=HMPREF7215_0858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0858 GCA_000177335.1|ADFP01000093.1 Genbank CDS 3442 3855 . - 0 ID=cds-EFB90136.1;Parent=gene-HMPREF7215_0858;Dbxref=NCBI_GP:EFB90136.1;Name=EFB90136.1;gbkey=CDS;locus_tag=HMPREF7215_0858;product=hypothetical protein;protein_id=EFB90136.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 3869 4561 . - . ID=gene-HMPREF7215_0859;Name=HMPREF7215_0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0859 GCA_000177335.1|ADFP01000093.1 Genbank CDS 3869 4561 . - 0 ID=cds-EFB90137.1;Parent=gene-HMPREF7215_0859;Dbxref=NCBI_GP:EFB90137.1;Name=EFB90137.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0859;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90137.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 4564 5772 . - . ID=gene-HMPREF7215_0860;Name=HMPREF7215_0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0860 GCA_000177335.1|ADFP01000093.1 Genbank CDS 4564 5772 . - 0 ID=cds-EFB90138.1;Parent=gene-HMPREF7215_0860;Dbxref=NCBI_GP:EFB90138.1;Name=EFB90138.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF7215_0860;product=efflux ABC transporter%2C permease protein;protein_id=EFB90138.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 5762 7048 . - . ID=gene-HMPREF7215_0861;Name=HMPREF7215_0861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0861 GCA_000177335.1|ADFP01000093.1 Genbank CDS 5762 7048 . - 0 ID=cds-EFB90139.1;Parent=gene-HMPREF7215_0861;Dbxref=NCBI_GP:EFB90139.1;Name=EFB90139.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF7215_0861;product=efflux ABC transporter%2C permease protein;protein_id=EFB90139.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 7064 8371 . - . ID=gene-HMPREF7215_0862;Name=HMPREF7215_0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0862 GCA_000177335.1|ADFP01000093.1 Genbank CDS 7064 8371 . - 0 ID=cds-EFB90140.1;Parent=gene-HMPREF7215_0862;Dbxref=NCBI_GP:EFB90140.1;Name=EFB90140.1;gbkey=CDS;locus_tag=HMPREF7215_0862;product=hypothetical protein;protein_id=EFB90140.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 8440 9036 . - . ID=gene-HMPREF7215_0863;Name=HMPREF7215_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0863 GCA_000177335.1|ADFP01000093.1 Genbank CDS 8440 9036 . - 0 ID=cds-EFB90141.1;Parent=gene-HMPREF7215_0863;Dbxref=NCBI_GP:EFB90141.1;Name=EFB90141.1;gbkey=CDS;locus_tag=HMPREF7215_0863;product=hypothetical protein;protein_id=EFB90141.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 9109 10545 . - . ID=gene-HMPREF7215_0864;Name=HMPREF7215_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0864 GCA_000177335.1|ADFP01000093.1 Genbank CDS 9109 10545 . - 0 ID=cds-EFB90142.1;Parent=gene-HMPREF7215_0864;Dbxref=NCBI_GP:EFB90142.1;Name=EFB90142.1;Note=identified by match to protein family HMM PF03239;gbkey=CDS;locus_tag=HMPREF7215_0864;product=iron permease FTR1 family;protein_id=EFB90142.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 10896 11018 . - . ID=gene-HMPREF7215_0865;Name=HMPREF7215_0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0865 GCA_000177335.1|ADFP01000093.1 Genbank CDS 10896 11018 . - 0 ID=cds-EFB90143.1;Parent=gene-HMPREF7215_0865;Dbxref=NCBI_GP:EFB90143.1;Name=EFB90143.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0865;product=hypothetical protein;protein_id=EFB90143.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 11032 12288 . - . ID=gene-HMPREF7215_0866;Name=HMPREF7215_0866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0866 GCA_000177335.1|ADFP01000093.1 Genbank CDS 11032 12288 . - 0 ID=cds-EFB90144.1;Parent=gene-HMPREF7215_0866;Dbxref=NCBI_GP:EFB90144.1;Name=EFB90144.1;Note=identified by match to protein family HMM PF02515;gbkey=CDS;locus_tag=HMPREF7215_0866;product=CoA-transferase family III protein;protein_id=EFB90144.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 12347 13345 . - . ID=gene-HMPREF7215_0867;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0867 GCA_000177335.1|ADFP01000093.1 Genbank CDS 12347 13345 . - 0 ID=cds-EFB90145.1;Parent=gene-HMPREF7215_0867;Dbxref=NCBI_GP:EFB90145.1;Name=EFB90145.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;locus_tag=HMPREF7215_0867;product=electron transfer flavoprotein FAD-binding domain protein;protein_id=EFB90145.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 13359 14144 . - . ID=gene-HMPREF7215_0868;Name=HMPREF7215_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0868 GCA_000177335.1|ADFP01000093.1 Genbank CDS 13359 14144 . - 0 ID=cds-EFB90146.1;Parent=gene-HMPREF7215_0868;Dbxref=NCBI_GP:EFB90146.1;Name=EFB90146.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;locus_tag=HMPREF7215_0868;product=electron transfer flavoprotein domain protein;protein_id=EFB90146.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 14173 15306 . - . ID=gene-HMPREF7215_0869;Name=HMPREF7215_0869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0869 GCA_000177335.1|ADFP01000093.1 Genbank CDS 14173 15306 . - 0 ID=cds-EFB90147.1;Parent=gene-HMPREF7215_0869;Dbxref=NCBI_GP:EFB90147.1;Name=EFB90147.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;locus_tag=HMPREF7215_0869;product=acyl-CoA dehydrogenase%2C C-terminal domain protein;protein_id=EFB90147.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 15772 15861 . - . ID=gene-HMPREF7215_0871;Name=HMPREF7215_0871;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0871 GCA_000177335.1|ADFP01000093.1 Genbank tRNA 15772 15861 . - . ID=rna-HMPREF7215_0871;Parent=gene-HMPREF7215_0871;gbkey=tRNA;locus_tag=HMPREF7215_0871;product=tRNA-Ser GCA_000177335.1|ADFP01000093.1 Genbank exon 15772 15861 . - . ID=exon-HMPREF7215_0871-1;Parent=rna-HMPREF7215_0871;gbkey=tRNA;locus_tag=HMPREF7215_0871;product=tRNA-Ser GCA_000177335.1|ADFP01000093.1 Genbank gene 16013 16849 . - . ID=gene-HMPREF7215_0872;Name=HMPREF7215_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0872 GCA_000177335.1|ADFP01000093.1 Genbank CDS 16013 16849 . - 0 ID=cds-EFB90148.1;Parent=gene-HMPREF7215_0872;Dbxref=NCBI_GP:EFB90148.1;Name=EFB90148.1;Note=identified by match to protein family HMM PF01522%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_0872;product=polysaccharide deacetylase;protein_id=EFB90148.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 16842 17711 . - . ID=gene-HMPREF7215_0873;Name=HMPREF7215_0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0873 GCA_000177335.1|ADFP01000093.1 Genbank CDS 16842 17711 . - 0 ID=cds-EFB90149.1;Parent=gene-HMPREF7215_0873;Dbxref=NCBI_GP:EFB90149.1;Name=EFB90149.1;Note=identified by match to protein family HMM PF01522%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_0873;product=polysaccharide deacetylase;protein_id=EFB90149.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 17736 18458 . - . ID=gene-HMPREF7215_0874;Name=HMPREF7215_0874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0874 GCA_000177335.1|ADFP01000093.1 Genbank CDS 17736 18458 . - 0 ID=cds-EFB90150.1;Parent=gene-HMPREF7215_0874;Dbxref=NCBI_GP:EFB90150.1;Name=EFB90150.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0874;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90150.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 18445 19278 . - . ID=gene-HMPREF7215_0875;Name=HMPREF7215_0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0875 GCA_000177335.1|ADFP01000093.1 Genbank CDS 18445 19278 . - 0 ID=cds-EFB90151.1;Parent=gene-HMPREF7215_0875;Dbxref=NCBI_GP:EFB90151.1;Name=EFB90151.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_0875;product=ABC transporter%2C permease protein;protein_id=EFB90151.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 19341 20858 . - . ID=gene-HMPREF7215_0876;Name=HMPREF7215_0876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0876 GCA_000177335.1|ADFP01000093.1 Genbank CDS 19341 20858 . - 0 ID=cds-EFB90152.1;Parent=gene-HMPREF7215_0876;Dbxref=NCBI_GP:EFB90152.1;Name=EFB90152.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_0876;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB90152.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 20887 21621 . - . ID=gene-HMPREF7215_0877;Name=HMPREF7215_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0877 GCA_000177335.1|ADFP01000093.1 Genbank CDS 20887 21621 . - 0 ID=cds-EFB90153.1;Parent=gene-HMPREF7215_0877;Dbxref=NCBI_GP:EFB90153.1;Name=EFB90153.1;Note=identified by match to protein family HMM PF01177;gbkey=CDS;locus_tag=HMPREF7215_0877;product=Asp/Glu/Hydantoin racemase;protein_id=EFB90153.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 21618 22940 . - . ID=gene-HMPREF7215_0878;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0878 GCA_000177335.1|ADFP01000093.1 Genbank CDS 21618 22940 . - 0 ID=cds-EFB90154.1;Parent=gene-HMPREF7215_0878;Dbxref=NCBI_GP:EFB90154.1;Name=EFB90154.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838;gbkey=CDS;gene=argH;locus_tag=HMPREF7215_0878;product=argininosuccinate lyase;protein_id=EFB90154.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 23043 23165 . - . ID=gene-HMPREF7215_0879;Name=HMPREF7215_0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0879 GCA_000177335.1|ADFP01000093.1 Genbank CDS 23043 23165 . - 0 ID=cds-EFB90155.1;Parent=gene-HMPREF7215_0879;Dbxref=NCBI_GP:EFB90155.1;Name=EFB90155.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0879;product=hypothetical protein;protein_id=EFB90155.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 23164 23289 . + . ID=gene-HMPREF7215_0881;Name=HMPREF7215_0881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0881 GCA_000177335.1|ADFP01000093.1 Genbank CDS 23164 23289 . + 0 ID=cds-EFB90156.1;Parent=gene-HMPREF7215_0881;Dbxref=NCBI_GP:EFB90156.1;Name=EFB90156.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0881;product=hypothetical protein;protein_id=EFB90156.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 23286 24581 . - . ID=gene-HMPREF7215_0880;Name=HMPREF7215_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0880 GCA_000177335.1|ADFP01000093.1 Genbank CDS 23286 24581 . - 0 ID=cds-EFB90157.1;Parent=gene-HMPREF7215_0880;Dbxref=NCBI_GP:EFB90157.1;Name=EFB90157.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;locus_tag=HMPREF7215_0880;product=hypothetical protein;protein_id=EFB90157.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 24976 25656 . - . ID=gene-HMPREF7215_0882;Name=HMPREF7215_0882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0882 GCA_000177335.1|ADFP01000093.1 Genbank CDS 24976 25656 . - 0 ID=cds-EFB90158.1;Parent=gene-HMPREF7215_0882;Dbxref=NCBI_GP:EFB90158.1;Name=EFB90158.1;gbkey=CDS;locus_tag=HMPREF7215_0882;product=hypothetical protein;protein_id=EFB90158.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 25653 26888 . - . ID=gene-HMPREF7215_0883;Name=HMPREF7215_0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0883 GCA_000177335.1|ADFP01000093.1 Genbank CDS 25653 26888 . - 0 ID=cds-EFB90159.1;Parent=gene-HMPREF7215_0883;Dbxref=NCBI_GP:EFB90159.1;Name=EFB90159.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0883;product=hypothetical protein;protein_id=EFB90159.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 26888 27403 . - . ID=gene-HMPREF7215_0884;Name=HMPREF7215_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0884 GCA_000177335.1|ADFP01000093.1 Genbank CDS 26888 27403 . - 0 ID=cds-EFB90160.1;Parent=gene-HMPREF7215_0884;Dbxref=NCBI_GP:EFB90160.1;Name=EFB90160.1;gbkey=CDS;locus_tag=HMPREF7215_0884;product=hypothetical protein;protein_id=EFB90160.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 27400 28443 . - . ID=gene-HMPREF7215_0885;Name=HMPREF7215_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0885 GCA_000177335.1|ADFP01000093.1 Genbank CDS 27400 28443 . - 0 ID=cds-EFB90161.1;Parent=gene-HMPREF7215_0885;Dbxref=NCBI_GP:EFB90161.1;Name=EFB90161.1;Note=identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904;gbkey=CDS;locus_tag=HMPREF7215_0885;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EFB90161.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 28536 29279 . - . ID=gene-HMPREF7215_0886;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0886 GCA_000177335.1|ADFP01000093.1 Genbank CDS 28536 29279 . - 0 ID=cds-EFB90162.1;Parent=gene-HMPREF7215_0886;Dbxref=NCBI_GP:EFB90162.1;Name=EFB90162.1;Note=identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071;gbkey=CDS;gene=truA;locus_tag=HMPREF7215_0886;product=tRNA pseudouridine synthase A;protein_id=EFB90162.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 29279 30088 . - . ID=gene-HMPREF7215_0887;Name=HMPREF7215_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0887 GCA_000177335.1|ADFP01000093.1 Genbank CDS 29279 30088 . - 0 ID=cds-EFB90163.1;Parent=gene-HMPREF7215_0887;Dbxref=NCBI_GP:EFB90163.1;Name=EFB90163.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF7215_0887;product=cobalt transport protein;protein_id=EFB90163.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 30085 30945 . - . ID=gene-HMPREF7215_0888;Name=HMPREF7215_0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0888 GCA_000177335.1|ADFP01000093.1 Genbank CDS 30085 30945 . - 0 ID=cds-EFB90164.1;Parent=gene-HMPREF7215_0888;Dbxref=NCBI_GP:EFB90164.1;Name=EFB90164.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0888;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90164.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 30921 31748 . - . ID=gene-HMPREF7215_0889;Name=HMPREF7215_0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0889 GCA_000177335.1|ADFP01000093.1 Genbank CDS 30921 31748 . - 0 ID=cds-EFB90165.1;Parent=gene-HMPREF7215_0889;Dbxref=NCBI_GP:EFB90165.1;Name=EFB90165.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0889;product=cobalt ABC transporter%2C ATP-binding protein;protein_id=EFB90165.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 31776 32129 . - . ID=gene-HMPREF7215_0890;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0890 GCA_000177335.1|ADFP01000093.1 Genbank CDS 31776 32129 . - 0 ID=cds-EFB90166.1;Parent=gene-HMPREF7215_0890;Dbxref=NCBI_GP:EFB90166.1;Name=EFB90166.1;Note=identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059;gbkey=CDS;gene=rplQ;locus_tag=HMPREF7215_0890;product=ribosomal protein L17;protein_id=EFB90166.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 32136 33152 . - . ID=gene-HMPREF7215_0891;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0891 GCA_000177335.1|ADFP01000093.1 Genbank CDS 32136 33152 . - 0 ID=cds-EFB90167.1;Parent=gene-HMPREF7215_0891;Dbxref=NCBI_GP:EFB90167.1;Name=EFB90167.1;Note=identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027;gbkey=CDS;gene=rpoA;locus_tag=HMPREF7215_0891;product=DNA-directed RNA polymerase%2C alpha subunit;protein_id=EFB90167.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 33236 33619 . - . ID=gene-HMPREF7215_0892;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=HMPREF7215_0892 GCA_000177335.1|ADFP01000093.1 Genbank CDS 33236 33619 . - 0 ID=cds-EFB90168.1;Parent=gene-HMPREF7215_0892;Dbxref=NCBI_GP:EFB90168.1;Name=EFB90168.1;Note=identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632;gbkey=CDS;gene=rpsK;locus_tag=HMPREF7215_0892;product=30S ribosomal protein S11;protein_id=EFB90168.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 33638 34018 . - . ID=gene-HMPREF7215_0893;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=HMPREF7215_0893 GCA_000177335.1|ADFP01000093.1 Genbank CDS 33638 34018 . - 0 ID=cds-EFB90169.1;Parent=gene-HMPREF7215_0893;Dbxref=NCBI_GP:EFB90169.1;Name=EFB90169.1;Note=identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631;gbkey=CDS;gene=rpsM;locus_tag=HMPREF7215_0893;product=30S ribosomal protein S13;protein_id=EFB90169.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 34024 34149 . - . ID=gene-HMPREF7215_0894;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0894 GCA_000177335.1|ADFP01000093.1 Genbank CDS 34024 34149 . - 0 ID=cds-EFB90170.1;Parent=gene-HMPREF7215_0894;Dbxref=NCBI_GP:EFB90170.1;Name=EFB90170.1;gbkey=CDS;gene=rpmJ;locus_tag=HMPREF7215_0894;product=ribosomal protein L36;protein_id=EFB90170.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 34215 34436 . - . ID=gene-HMPREF7215_0895;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0895 GCA_000177335.1|ADFP01000093.1 Genbank CDS 34215 34436 . - 0 ID=cds-EFB90171.1;Parent=gene-HMPREF7215_0895;Dbxref=NCBI_GP:EFB90171.1;Name=EFB90171.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008;gbkey=CDS;gene=infA;locus_tag=HMPREF7215_0895;product=translation initiation factor IF-1;protein_id=EFB90171.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 34468 35238 . - . ID=gene-HMPREF7215_0896;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=HMPREF7215_0896 GCA_000177335.1|ADFP01000093.1 Genbank CDS 34468 35238 . - 0 ID=cds-EFB90172.1;Parent=gene-HMPREF7215_0896;Dbxref=NCBI_GP:EFB90172.1;Name=EFB90172.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;locus_tag=HMPREF7215_0896;product=methionine aminopeptidase%2C type I;protein_id=EFB90172.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 35235 35885 . - . ID=gene-HMPREF7215_0897;Name=HMPREF7215_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0897 GCA_000177335.1|ADFP01000093.1 Genbank CDS 35235 35885 . - 0 ID=cds-EFB90173.1;Parent=gene-HMPREF7215_0897;Dbxref=NCBI_GP:EFB90173.1;Name=EFB90173.1;Note=identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351;gbkey=CDS;locus_tag=HMPREF7215_0897;product=adenylate kinase;protein_id=EFB90173.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 35898 37184 . - . ID=gene-HMPREF7215_0898;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0898 GCA_000177335.1|ADFP01000093.1 Genbank CDS 35898 37184 . - 0 ID=cds-EFB90174.1;Parent=gene-HMPREF7215_0898;Dbxref=NCBI_GP:EFB90174.1;Name=EFB90174.1;Note=identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967;gbkey=CDS;gene=secY;locus_tag=HMPREF7215_0898;product=preprotein translocase%2C SecY subunit;protein_id=EFB90174.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 37186 37632 . - . ID=gene-HMPREF7215_0899;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=HMPREF7215_0899 GCA_000177335.1|ADFP01000093.1 Genbank CDS 37186 37632 . - 0 ID=cds-EFB90175.1;Parent=gene-HMPREF7215_0899;Dbxref=NCBI_GP:EFB90175.1;Name=EFB90175.1;Note=identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071;gbkey=CDS;gene=rplO;locus_tag=HMPREF7215_0899;product=ribosomal protein L15;protein_id=EFB90175.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 37646 37831 . - . ID=gene-HMPREF7215_0900;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0900 GCA_000177335.1|ADFP01000093.1 Genbank CDS 37646 37831 . - 0 ID=cds-EFB90176.1;Parent=gene-HMPREF7215_0900;Dbxref=NCBI_GP:EFB90176.1;Name=EFB90176.1;Note=identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308;gbkey=CDS;gene=rpmD;locus_tag=HMPREF7215_0900;product=ribosomal protein L30;protein_id=EFB90176.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 37845 38348 . - . ID=gene-HMPREF7215_0901;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0901 GCA_000177335.1|ADFP01000093.1 Genbank CDS 37845 38348 . - 0 ID=cds-EFB90177.1;Parent=gene-HMPREF7215_0901;Dbxref=NCBI_GP:EFB90177.1;Name=EFB90177.1;Note=identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021;gbkey=CDS;gene=rpsE;locus_tag=HMPREF7215_0901;product=ribosomal protein S5;protein_id=EFB90177.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 38361 38732 . - . ID=gene-HMPREF7215_0902;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=HMPREF7215_0902 GCA_000177335.1|ADFP01000093.1 Genbank CDS 38361 38732 . - 0 ID=cds-EFB90178.1;Parent=gene-HMPREF7215_0902;Dbxref=NCBI_GP:EFB90178.1;Name=EFB90178.1;Note=identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060;gbkey=CDS;gene=rplR;locus_tag=HMPREF7215_0902;product=ribosomal protein L18;protein_id=EFB90178.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 38749 39288 . - . ID=gene-HMPREF7215_0903;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0903 GCA_000177335.1|ADFP01000093.1 Genbank CDS 38749 39288 . - 0 ID=cds-EFB90179.1;Parent=gene-HMPREF7215_0903;Dbxref=NCBI_GP:EFB90179.1;Name=EFB90179.1;Note=identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654;gbkey=CDS;gene=rplF;locus_tag=HMPREF7215_0903;product=ribosomal protein L6;protein_id=EFB90179.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 39303 39707 . - . ID=gene-HMPREF7215_0904;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0904 GCA_000177335.1|ADFP01000093.1 Genbank CDS 39303 39707 . - 0 ID=cds-EFB90180.1;Parent=gene-HMPREF7215_0904;Dbxref=NCBI_GP:EFB90180.1;Name=EFB90180.1;Note=identified by match to protein family HMM PF00410;gbkey=CDS;gene=rpsH;locus_tag=HMPREF7215_0904;product=ribosomal protein S8;protein_id=EFB90180.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 39736 39921 . - . ID=gene-HMPREF7215_0905;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF7215_0905 GCA_000177335.1|ADFP01000093.1 Genbank CDS 39736 39921 . - 0 ID=cds-EFB90181.1;Parent=gene-HMPREF7215_0905;Dbxref=NCBI_GP:EFB90181.1;Name=EFB90181.1;Note=identified by match to protein family HMM PF00253;gbkey=CDS;gene=rpsN;locus_tag=HMPREF7215_0905;product=ribosomal protein S14p/S29e;protein_id=EFB90181.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 39933 40481 . - . ID=gene-HMPREF7215_0906;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0906 GCA_000177335.1|ADFP01000093.1 Genbank CDS 39933 40481 . - 0 ID=cds-EFB90182.1;Parent=gene-HMPREF7215_0906;Dbxref=NCBI_GP:EFB90182.1;Name=EFB90182.1;Note=identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673;gbkey=CDS;gene=rplE;locus_tag=HMPREF7215_0906;product=ribosomal protein L5;protein_id=EFB90182.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 40497 40829 . - . ID=gene-HMPREF7215_0907;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0907 GCA_000177335.1|ADFP01000093.1 Genbank CDS 40497 40829 . - 0 ID=cds-EFB90183.1;Parent=gene-HMPREF7215_0907;Dbxref=NCBI_GP:EFB90183.1;Name=EFB90183.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079;gbkey=CDS;gene=rplX;locus_tag=HMPREF7215_0907;product=ribosomal protein L24;protein_id=EFB90183.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 40839 41207 . - . ID=gene-HMPREF7215_0908;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=HMPREF7215_0908 GCA_000177335.1|ADFP01000093.1 Genbank CDS 40839 41207 . - 0 ID=cds-EFB90184.1;Parent=gene-HMPREF7215_0908;Dbxref=NCBI_GP:EFB90184.1;Name=EFB90184.1;Note=identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067;gbkey=CDS;gene=rplN;locus_tag=HMPREF7215_0908;product=ribosomal protein L14;protein_id=EFB90184.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 41211 41501 . - . ID=gene-HMPREF7215_0909;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0909 GCA_000177335.1|ADFP01000093.1 Genbank CDS 41211 41501 . - 0 ID=cds-EFB90185.1;Parent=gene-HMPREF7215_0909;Dbxref=NCBI_GP:EFB90185.1;Name=EFB90185.1;Note=identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635;gbkey=CDS;gene=rpsQ;locus_tag=HMPREF7215_0909;product=30S ribosomal protein S17;protein_id=EFB90185.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 41508 41723 . - . ID=gene-HMPREF7215_0910;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0910 GCA_000177335.1|ADFP01000093.1 Genbank CDS 41508 41723 . - 0 ID=cds-EFB90186.1;Parent=gene-HMPREF7215_0910;Dbxref=NCBI_GP:EFB90186.1;Name=EFB90186.1;Note=identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012;gbkey=CDS;gene=rpmC;locus_tag=HMPREF7215_0910;product=ribosomal protein L29;protein_id=EFB90186.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 41726 42148 . - . ID=gene-HMPREF7215_0911;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=HMPREF7215_0911 GCA_000177335.1|ADFP01000093.1 Genbank CDS 41726 42148 . - 0 ID=cds-EFB90187.1;Parent=gene-HMPREF7215_0911;Dbxref=NCBI_GP:EFB90187.1;Name=EFB90187.1;Note=identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164;gbkey=CDS;gene=rplP;locus_tag=HMPREF7215_0911;product=ribosomal protein L16;protein_id=EFB90187.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 42149 42838 . - . ID=gene-HMPREF7215_0912;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0912 GCA_000177335.1|ADFP01000093.1 Genbank CDS 42149 42838 . - 0 ID=cds-EFB90188.1;Parent=gene-HMPREF7215_0912;Dbxref=NCBI_GP:EFB90188.1;Name=EFB90188.1;Note=identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;locus_tag=HMPREF7215_0912;product=ribosomal protein S3;protein_id=EFB90188.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 42853 43182 . - . ID=gene-HMPREF7215_0913;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HMPREF7215_0913 GCA_000177335.1|ADFP01000093.1 Genbank CDS 42853 43182 . - 0 ID=cds-EFB90189.1;Parent=gene-HMPREF7215_0913;Dbxref=NCBI_GP:EFB90189.1;Name=EFB90189.1;Note=identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044;gbkey=CDS;gene=rplV;locus_tag=HMPREF7215_0913;product=ribosomal protein L22;protein_id=EFB90189.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 43532 44362 . - . ID=gene-HMPREF7215_0914;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0914 GCA_000177335.1|ADFP01000093.1 Genbank CDS 43532 44362 . - 0 ID=cds-EFB90190.1;Parent=gene-HMPREF7215_0914;Dbxref=NCBI_GP:EFB90190.1;Name=EFB90190.1;Note=identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171;gbkey=CDS;gene=rplB;locus_tag=HMPREF7215_0914;product=ribosomal protein L2;protein_id=EFB90190.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 44384 44680 . - . ID=gene-HMPREF7215_0915;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HMPREF7215_0915 GCA_000177335.1|ADFP01000093.1 Genbank CDS 44384 44680 . - 0 ID=cds-EFB90191.1;Parent=gene-HMPREF7215_0915;Dbxref=NCBI_GP:EFB90191.1;Name=EFB90191.1;Note=identified by match to protein family HMM PF00276;gbkey=CDS;gene=rplW;locus_tag=HMPREF7215_0915;product=ribosomal protein L23;protein_id=EFB90191.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 44677 45300 . - . ID=gene-HMPREF7215_0916;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0916 GCA_000177335.1|ADFP01000093.1 Genbank CDS 44677 45300 . - 0 ID=cds-EFB90192.1;Parent=gene-HMPREF7215_0916;Dbxref=NCBI_GP:EFB90192.1;Name=EFB90192.1;Note=identified by match to protein family HMM PF00573;gbkey=CDS;gene=rplD;locus_tag=HMPREF7215_0916;product=50S ribosomal protein L4;protein_id=EFB90192.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 45321 45947 . - . ID=gene-HMPREF7215_0917;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0917 GCA_000177335.1|ADFP01000093.1 Genbank CDS 45321 45947 . - 0 ID=cds-EFB90193.1;Parent=gene-HMPREF7215_0917;Dbxref=NCBI_GP:EFB90193.1;Name=EFB90193.1;Note=identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625;gbkey=CDS;gene=rplC;locus_tag=HMPREF7215_0917;product=50S ribosomal protein L3;protein_id=EFB90193.1;transl_table=11 GCA_000177335.1|ADFP01000093.1 Genbank gene 46035 46340 . - . ID=gene-HMPREF7215_0918;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0918 GCA_000177335.1|ADFP01000093.1 Genbank CDS 46035 46340 . - 0 ID=cds-EFB90194.1;Parent=gene-HMPREF7215_0918;Dbxref=NCBI_GP:EFB90194.1;Name=EFB90194.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;locus_tag=HMPREF7215_0918;product=ribosomal protein S10;protein_id=EFB90194.1;transl_table=11 ##sequence-region ADFP01000092.1 1 9265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000092.1 Genbank region 1 9265 . + . ID=ADFP01000092.1:1..9265;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000092.1 Genbank gene 68 295 . - . ID=gene-HMPREF7215_1280;Name=HMPREF7215_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1280 GCA_000177335.1|ADFP01000092.1 Genbank CDS 68 295 . - 0 ID=cds-EFB90195.1;Parent=gene-HMPREF7215_1280;Dbxref=NCBI_GP:EFB90195.1;Name=EFB90195.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1280;product=hypothetical protein;protein_id=EFB90195.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 313 1587 . + . ID=gene-HMPREF7215_1281;Name=HMPREF7215_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1281 GCA_000177335.1|ADFP01000092.1 Genbank CDS 313 1587 . + 0 ID=cds-EFB90196.1;Parent=gene-HMPREF7215_1281;Dbxref=NCBI_GP:EFB90196.1;Name=EFB90196.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_1281;product=MATE efflux family protein;protein_id=EFB90196.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 1670 1798 . - . ID=gene-HMPREF7215_1282;Name=HMPREF7215_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1282 GCA_000177335.1|ADFP01000092.1 Genbank CDS 1670 1798 . - 0 ID=cds-EFB90197.1;Parent=gene-HMPREF7215_1282;Dbxref=NCBI_GP:EFB90197.1;Name=EFB90197.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1282;product=hypothetical protein;protein_id=EFB90197.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 1858 3012 . + . ID=gene-HMPREF7215_1283;Name=HMPREF7215_1283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1283 GCA_000177335.1|ADFP01000092.1 Genbank CDS 1858 3012 . + 0 ID=cds-EFB90198.1;Parent=gene-HMPREF7215_1283;Dbxref=NCBI_GP:EFB90198.1;Name=EFB90198.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;locus_tag=HMPREF7215_1283;product=receptor family ligand-binding protein;protein_id=EFB90198.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 3040 4044 . + . ID=gene-HMPREF7215_1284;Name=HMPREF7215_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1284 GCA_000177335.1|ADFP01000092.1 Genbank CDS 3040 4044 . + 0 ID=cds-EFB90199.1;Parent=gene-HMPREF7215_1284;Dbxref=NCBI_GP:EFB90199.1;Name=EFB90199.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1284;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB90199.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 4054 5166 . + . ID=gene-HMPREF7215_1285;Name=HMPREF7215_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1285 GCA_000177335.1|ADFP01000092.1 Genbank CDS 4054 5166 . + 0 ID=cds-EFB90200.1;Parent=gene-HMPREF7215_1285;Dbxref=NCBI_GP:EFB90200.1;Name=EFB90200.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1285;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB90200.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 5159 6007 . + . ID=gene-HMPREF7215_1286;Name=HMPREF7215_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1286 GCA_000177335.1|ADFP01000092.1 Genbank CDS 5159 6007 . + 0 ID=cds-EFB90201.1;Parent=gene-HMPREF7215_1286;Dbxref=NCBI_GP:EFB90201.1;Name=EFB90201.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1286;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90201.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 6004 6714 . + . ID=gene-HMPREF7215_1287;Name=HMPREF7215_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1287 GCA_000177335.1|ADFP01000092.1 Genbank CDS 6004 6714 . + 0 ID=cds-EFB90202.1;Parent=gene-HMPREF7215_1287;Dbxref=NCBI_GP:EFB90202.1;Name=EFB90202.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1287;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90202.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 7021 7344 . - . ID=gene-HMPREF7215_1288;Name=HMPREF7215_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1288 GCA_000177335.1|ADFP01000092.1 Genbank CDS 7021 7344 . - 0 ID=cds-EFB90203.1;Parent=gene-HMPREF7215_1288;Dbxref=NCBI_GP:EFB90203.1;Name=EFB90203.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1288;product=putative glycine/sarcosine/betaine reductase complex protein A;protein_id=EFB90203.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 7366 7497 . - . ID=gene-HMPREF7215_1289;Name=HMPREF7215_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1289 GCA_000177335.1|ADFP01000092.1 Genbank CDS 7366 7497 . - 0 ID=cds-EFB90204.1;Parent=gene-HMPREF7215_1289;Dbxref=NCBI_GP:EFB90204.1;Name=EFB90204.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1289;product=glycine/sarcosine/betaine reductase complex protein A;protein_id=EFB90204.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 7868 8293 . + . ID=gene-HMPREF7215_1291;Name=HMPREF7215_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1291 GCA_000177335.1|ADFP01000092.1 Genbank CDS 7868 8293 . + 0 ID=cds-EFB90205.1;Parent=gene-HMPREF7215_1291;Dbxref=NCBI_GP:EFB90205.1;Name=EFB90205.1;gbkey=CDS;locus_tag=HMPREF7215_1291;product=hypothetical protein;protein_id=EFB90205.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 8290 8646 . - . ID=gene-HMPREF7215_1290;Name=HMPREF7215_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1290 GCA_000177335.1|ADFP01000092.1 Genbank CDS 8290 8646 . - 0 ID=cds-EFB90206.1;Parent=gene-HMPREF7215_1290;Dbxref=NCBI_GP:EFB90206.1;Name=EFB90206.1;gbkey=CDS;locus_tag=HMPREF7215_1290;product=hypothetical protein;protein_id=EFB90206.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 8665 8859 . - . ID=gene-HMPREF7215_1292;Name=HMPREF7215_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1292 GCA_000177335.1|ADFP01000092.1 Genbank CDS 8665 8859 . - 0 ID=cds-EFB90207.1;Parent=gene-HMPREF7215_1292;Dbxref=NCBI_GP:EFB90207.1;Name=EFB90207.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1292;product=hypothetical protein;protein_id=EFB90207.1;transl_table=11 GCA_000177335.1|ADFP01000092.1 Genbank gene 8852 9247 . - . ID=gene-HMPREF7215_1293;Name=HMPREF7215_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1293 GCA_000177335.1|ADFP01000092.1 Genbank CDS 8852 9247 . - 0 ID=cds-EFB90208.1;Parent=gene-HMPREF7215_1293;Dbxref=NCBI_GP:EFB90208.1;Name=EFB90208.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1293;product=hypothetical protein;protein_id=EFB90208.1;transl_table=11 ##sequence-region ADFP01000091.1 1 10900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000091.1 Genbank region 1 10900 . + . ID=ADFP01000091.1:1..10900;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000091.1 Genbank gene 1 2405 . - . ID=gene-HMPREF7215_2454;Name=HMPREF7215_2454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2454;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000091.1 Genbank CDS 1 2405 . - 0 ID=cds-EFB90209.1;Parent=gene-HMPREF7215_2454;Dbxref=NCBI_GP:EFB90209.1;Name=EFB90209.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2454;partial=true;product=hypothetical protein;protein_id=EFB90209.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 2631 3980 . + . ID=gene-HMPREF7215_2455;Name=HMPREF7215_2455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2455 GCA_000177335.1|ADFP01000091.1 Genbank CDS 2631 3980 . + 0 ID=cds-EFB90210.1;Parent=gene-HMPREF7215_2455;Dbxref=NCBI_GP:EFB90210.1;Name=EFB90210.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_2455;product=MATE efflux family protein;protein_id=EFB90210.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 4122 5189 . + . ID=gene-HMPREF7215_2456;Name=HMPREF7215_2456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2456 GCA_000177335.1|ADFP01000091.1 Genbank CDS 4122 5189 . + 0 ID=cds-EFB90211.1;Parent=gene-HMPREF7215_2456;Dbxref=NCBI_GP:EFB90211.1;Name=EFB90211.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF7215_2456;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB90211.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 5186 5836 . + . ID=gene-HMPREF7215_2457;Name=HMPREF7215_2457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2457 GCA_000177335.1|ADFP01000091.1 Genbank CDS 5186 5836 . + 0 ID=cds-EFB90212.1;Parent=gene-HMPREF7215_2457;Dbxref=NCBI_GP:EFB90212.1;Name=EFB90212.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;locus_tag=HMPREF7215_2457;product=response regulator receiver domain protein;protein_id=EFB90212.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 6210 7571 . + . ID=gene-HMPREF7215_2458;Name=grdE;gbkey=Gene;gene=grdE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2458 GCA_000177335.1|ADFP01000091.1 Genbank CDS 6210 7571 . + 0 ID=cds-EFB90213.1;Parent=gene-HMPREF7215_2458;Dbxref=NCBI_GP:EFB90213.1;Name=EFB90213.1;Note=identified by match to protein family HMM PF09338;gbkey=CDS;gene=grdE;locus_tag=HMPREF7215_2458;product=glycine reductase%2C subunit ABC;protein_id=EFB90213.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 7592 8641 . + . ID=gene-HMPREF7215_2459;Name=grdH;gbkey=Gene;gene=grdH;gene_biotype=protein_coding;locus_tag=HMPREF7215_2459 GCA_000177335.1|ADFP01000091.1 Genbank CDS 7592 8641 . + 0 ID=cds-EFB90214.1;Parent=gene-HMPREF7215_2459;Dbxref=NCBI_GP:EFB90214.1;Name=EFB90214.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF07355%3B match to protein family HMM TIGR01918;gbkey=CDS;gene=grdH;locus_tag=HMPREF7215_2459;product=betaine reductase complex component B subunit beta;protein_id=EFB90214.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 8669 8908 . + . ID=gene-HMPREF7215_2460;Name=HMPREF7215_2460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2460 GCA_000177335.1|ADFP01000091.1 Genbank CDS 8669 8908 . + 0 ID=cds-EFB90215.1;Parent=gene-HMPREF7215_2460;Dbxref=NCBI_GP:EFB90215.1;Name=EFB90215.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_2460;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase domain protein;protein_id=EFB90215.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 9048 10610 . + . ID=gene-HMPREF7215_2461;Name=HMPREF7215_2461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2461 GCA_000177335.1|ADFP01000091.1 Genbank CDS 9048 10610 . + 0 ID=cds-EFB90216.1;Parent=gene-HMPREF7215_2461;Dbxref=NCBI_GP:EFB90216.1;Name=EFB90216.1;Note=identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842;gbkey=CDS;locus_tag=HMPREF7215_2461;product=transporter%2C betaine/carnitine/choline family;protein_id=EFB90216.1;transl_table=11 GCA_000177335.1|ADFP01000091.1 Genbank gene 10719 10900 . + . ID=gene-HMPREF7215_2463;Name=HMPREF7215_2463;end_range=10900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2463;partial=true GCA_000177335.1|ADFP01000091.1 Genbank CDS 10719 10900 . + 0 ID=cds-EFB90217.1;Parent=gene-HMPREF7215_2463;Dbxref=NCBI_GP:EFB90217.1;Name=EFB90217.1;Note=identified by glimmer%3B putative;end_range=10900,.;gbkey=CDS;locus_tag=HMPREF7215_2463;partial=true;product=hypothetical protein;protein_id=EFB90217.1;transl_table=11 ##sequence-region ADFP01000090.1 1 38731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000090.1 Genbank region 1 38731 . + . ID=ADFP01000090.1:1..38731;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000090.1 Genbank gene 1 115 . + . ID=gene-HMPREF7215_2689;Name=HMPREF7215_2689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2689;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000090.1 Genbank CDS 1 115 . + 1 ID=cds-EFB90218.1;Parent=gene-HMPREF7215_2689;Dbxref=NCBI_GP:EFB90218.1;Name=EFB90218.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2689;partial=true;product=hypothetical protein;protein_id=EFB90218.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 394 1272 . + . ID=gene-HMPREF7215_2690;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2690 GCA_000177335.1|ADFP01000090.1 Genbank CDS 394 1272 . + 0 ID=cds-EFB90219.1;Parent=gene-HMPREF7215_2690;Dbxref=NCBI_GP:EFB90219.1;Name=EFB90219.1;Note=identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676;gbkey=CDS;gene=metF;locus_tag=HMPREF7215_2690;product=methylenetetrahydrofolate reductase (NAD(P)H);protein_id=EFB90219.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 1272 1946 . + . ID=gene-HMPREF7215_2691;Name=HMPREF7215_2691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2691 GCA_000177335.1|ADFP01000090.1 Genbank CDS 1272 1946 . + 0 ID=cds-EFB90220.1;Parent=gene-HMPREF7215_2691;Dbxref=NCBI_GP:EFB90220.1;Name=EFB90220.1;Note=identified by match to protein family HMM PF02965;gbkey=CDS;locus_tag=HMPREF7215_2691;product=Vitamin B12 dependent methionine synthase%2C activation domain protein;protein_id=EFB90220.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 1930 4326 . + . ID=gene-HMPREF7215_2692;Name=HMPREF7215_2692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2692 GCA_000177335.1|ADFP01000090.1 Genbank CDS 1930 4326 . + 0 ID=cds-EFB90221.1;Parent=gene-HMPREF7215_2692;Dbxref=NCBI_GP:EFB90221.1;Name=EFB90221.1;Note=identified by match to protein family HMM PF00809%3B match to protein family HMM PF02310%3B match to protein family HMM PF02574%3B match to protein family HMM PF02607;gbkey=CDS;locus_tag=HMPREF7215_2692;product=putative 5-methyltetrahydrofolate--homocysteine methyltransferase;protein_id=EFB90221.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 4451 5281 . - . ID=gene-HMPREF7215_2693;Name=HMPREF7215_2693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2693 GCA_000177335.1|ADFP01000090.1 Genbank CDS 4451 5281 . - 0 ID=cds-EFB90222.1;Parent=gene-HMPREF7215_2693;Dbxref=NCBI_GP:EFB90222.1;Name=EFB90222.1;Note=identified by match to protein family HMM PF01048;gbkey=CDS;locus_tag=HMPREF7215_2693;product=putative uridine phosphorylase;protein_id=EFB90222.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 5429 8644 . - . ID=gene-HMPREF7215_2694;Name=HMPREF7215_2694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2694 GCA_000177335.1|ADFP01000090.1 Genbank CDS 5429 8644 . - 0 ID=cds-EFB90223.1;Parent=gene-HMPREF7215_2694;Dbxref=NCBI_GP:EFB90223.1;Name=EFB90223.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2694;product=hypothetical protein;protein_id=EFB90223.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 8888 9184 . + . ID=gene-HMPREF7215_2695;Name=HMPREF7215_2695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2695 GCA_000177335.1|ADFP01000090.1 Genbank CDS 8888 9184 . + 0 ID=cds-EFB90224.1;Parent=gene-HMPREF7215_2695;Dbxref=NCBI_GP:EFB90224.1;Name=EFB90224.1;gbkey=CDS;locus_tag=HMPREF7215_2695;product=hypothetical protein;protein_id=EFB90224.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 9195 10157 . + . ID=gene-HMPREF7215_2696;Name=HMPREF7215_2696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2696 GCA_000177335.1|ADFP01000090.1 Genbank CDS 9195 10157 . + 0 ID=cds-EFB90225.1;Parent=gene-HMPREF7215_2696;Dbxref=NCBI_GP:EFB90225.1;Name=EFB90225.1;Note=identified by match to protein family HMM PF02374%3B match to protein family HMM TIGR00345;gbkey=CDS;locus_tag=HMPREF7215_2696;product=arsenite-activated ATPase (arsA);protein_id=EFB90225.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 10229 10714 . - . ID=gene-HMPREF7215_2697;Name=HMPREF7215_2697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2697 GCA_000177335.1|ADFP01000090.1 Genbank CDS 10229 10714 . - 0 ID=cds-EFB90226.1;Parent=gene-HMPREF7215_2697;Dbxref=NCBI_GP:EFB90226.1;Name=EFB90226.1;gbkey=CDS;locus_tag=HMPREF7215_2697;product=hypothetical protein;protein_id=EFB90226.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 10885 11445 . + . ID=gene-HMPREF7215_2698;Name=HMPREF7215_2698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2698 GCA_000177335.1|ADFP01000090.1 Genbank CDS 10885 11445 . + 0 ID=cds-EFB90227.1;Parent=gene-HMPREF7215_2698;Dbxref=NCBI_GP:EFB90227.1;Name=EFB90227.1;gbkey=CDS;locus_tag=HMPREF7215_2698;product=HDIG domain protein;protein_id=EFB90227.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 11819 12109 . + . ID=gene-HMPREF7215_2699;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF7215_2699 GCA_000177335.1|ADFP01000090.1 Genbank RNase_P_RNA 11819 12109 . + . ID=rna-HMPREF7215_2699;Parent=gene-HMPREF7215_2699;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF7215_2699;product=Bacterial RNase P class A GCA_000177335.1|ADFP01000090.1 Genbank exon 11819 12109 . + . ID=exon-HMPREF7215_2699-1;Parent=rna-HMPREF7215_2699;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF7215_2699;product=Bacterial RNase P class A GCA_000177335.1|ADFP01000090.1 Genbank gene 12434 12871 . + . ID=gene-HMPREF7215_2700;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2700 GCA_000177335.1|ADFP01000090.1 Genbank CDS 12434 12871 . + 0 ID=cds-EFB90228.1;Parent=gene-HMPREF7215_2700;Dbxref=NCBI_GP:EFB90228.1;Name=EFB90228.1;Note=identified by match to protein family HMM PF02381%3B match to protein family HMM TIGR00242;gbkey=CDS;gene=mraZ;locus_tag=HMPREF7215_2700;product=protein MraZ;protein_id=EFB90228.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 12861 13802 . + . ID=gene-HMPREF7215_2701;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=HMPREF7215_2701 GCA_000177335.1|ADFP01000090.1 Genbank CDS 12861 13802 . + 0 ID=cds-EFB90229.1;Parent=gene-HMPREF7215_2701;Dbxref=NCBI_GP:EFB90229.1;Name=EFB90229.1;Note=identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;locus_tag=HMPREF7215_2701;product=S-adenosyl-methyltransferase MraW;protein_id=EFB90229.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 13847 14152 . + . ID=gene-HMPREF7215_2702;Name=HMPREF7215_2702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2702 GCA_000177335.1|ADFP01000090.1 Genbank CDS 13847 14152 . + 0 ID=cds-EFB90230.1;Parent=gene-HMPREF7215_2702;Dbxref=NCBI_GP:EFB90230.1;Name=EFB90230.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2702;product=hypothetical protein;protein_id=EFB90230.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 14196 15890 . + . ID=gene-HMPREF7215_2703;Name=HMPREF7215_2703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2703 GCA_000177335.1|ADFP01000090.1 Genbank CDS 14196 15890 . + 0 ID=cds-EFB90231.1;Parent=gene-HMPREF7215_2703;Dbxref=NCBI_GP:EFB90231.1;Name=EFB90231.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717;gbkey=CDS;locus_tag=HMPREF7215_2703;product=penicillin-binding protein%2C transpeptidase domain protein;protein_id=EFB90231.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 15906 17405 . + . ID=gene-HMPREF7215_2704;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2704 GCA_000177335.1|ADFP01000090.1 Genbank CDS 15906 17405 . + 0 ID=cds-EFB90232.1;Parent=gene-HMPREF7215_2704;Dbxref=NCBI_GP:EFB90232.1;Name=EFB90232.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085;gbkey=CDS;gene=murE;locus_tag=HMPREF7215_2704;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=EFB90232.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 17423 18778 . + . ID=gene-HMPREF7215_2705;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2705 GCA_000177335.1|ADFP01000090.1 Genbank CDS 17423 18778 . + 0 ID=cds-EFB90233.1;Parent=gene-HMPREF7215_2705;Dbxref=NCBI_GP:EFB90233.1;Name=EFB90233.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143;gbkey=CDS;gene=murF;locus_tag=HMPREF7215_2705;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=EFB90233.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 18775 19743 . + . ID=gene-HMPREF7215_2706;Name=HMPREF7215_2706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2706 GCA_000177335.1|ADFP01000090.1 Genbank CDS 18775 19743 . + 0 ID=cds-EFB90234.1;Parent=gene-HMPREF7215_2706;Dbxref=NCBI_GP:EFB90234.1;Name=EFB90234.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;locus_tag=HMPREF7215_2706;product=putative phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=EFB90234.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 19816 21126 . + . ID=gene-HMPREF7215_2707;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2707 GCA_000177335.1|ADFP01000090.1 Genbank CDS 19816 21126 . + 0 ID=cds-EFB90235.1;Parent=gene-HMPREF7215_2707;Dbxref=NCBI_GP:EFB90235.1;Name=EFB90235.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;locus_tag=HMPREF7215_2707;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=EFB90235.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 21098 22207 . + . ID=gene-HMPREF7215_2708;Name=HMPREF7215_2708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2708 GCA_000177335.1|ADFP01000090.1 Genbank CDS 21098 22207 . + 0 ID=cds-EFB90236.1;Parent=gene-HMPREF7215_2708;Dbxref=NCBI_GP:EFB90236.1;Name=EFB90236.1;Note=identified by match to protein family HMM PF01098;gbkey=CDS;locus_tag=HMPREF7215_2708;product=cell cycle protein%2C FtsW/RodA/SpoVE family;protein_id=EFB90236.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 22222 23259 . + . ID=gene-HMPREF7215_2709;Name=HMPREF7215_2709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2709 GCA_000177335.1|ADFP01000090.1 Genbank CDS 22222 23259 . + 0 ID=cds-EFB90237.1;Parent=gene-HMPREF7215_2709;Dbxref=NCBI_GP:EFB90237.1;Name=EFB90237.1;Note=identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101;gbkey=CDS;locus_tag=HMPREF7215_2709;product=glycosyltransferase family 28 N-terminal domain protein;protein_id=EFB90237.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 23274 24704 . + . ID=gene-HMPREF7215_2710;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2710 GCA_000177335.1|ADFP01000090.1 Genbank CDS 23274 24704 . + 0 ID=cds-EFB90238.1;Parent=gene-HMPREF7215_2710;Dbxref=NCBI_GP:EFB90238.1;Name=EFB90238.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082;gbkey=CDS;gene=murC;locus_tag=HMPREF7215_2710;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=EFB90238.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 24731 25492 . + . ID=gene-HMPREF7215_2711;Name=HMPREF7215_2711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2711 GCA_000177335.1|ADFP01000090.1 Genbank CDS 24731 25492 . + 0 ID=cds-EFB90239.1;Parent=gene-HMPREF7215_2711;Dbxref=NCBI_GP:EFB90239.1;Name=EFB90239.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2711;product=hypothetical protein;protein_id=EFB90239.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 25520 26836 . + . ID=gene-HMPREF7215_2712;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2712 GCA_000177335.1|ADFP01000090.1 Genbank CDS 25520 26836 . + 0 ID=cds-EFB90240.1;Parent=gene-HMPREF7215_2712;Dbxref=NCBI_GP:EFB90240.1;Name=EFB90240.1;Note=identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174;gbkey=CDS;gene=ftsA;locus_tag=HMPREF7215_2712;product=cell division protein FtsA;protein_id=EFB90240.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 26851 28023 . + . ID=gene-HMPREF7215_2713;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2713 GCA_000177335.1|ADFP01000090.1 Genbank CDS 26851 28023 . + 0 ID=cds-EFB90241.1;Parent=gene-HMPREF7215_2713;Dbxref=NCBI_GP:EFB90241.1;Name=EFB90241.1;Note=identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;locus_tag=HMPREF7215_2713;product=cell division protein FtsZ;protein_id=EFB90241.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 28096 28797 . + . ID=gene-HMPREF7215_2714;Name=HMPREF7215_2714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2714 GCA_000177335.1|ADFP01000090.1 Genbank CDS 28096 28797 . + 0 ID=cds-EFB90242.1;Parent=gene-HMPREF7215_2714;Dbxref=NCBI_GP:EFB90242.1;Name=EFB90242.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2714;product=sporulation and cell division repeat protein;protein_id=EFB90242.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 28794 29696 . + . ID=gene-HMPREF7215_2715;Name=HMPREF7215_2715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2715 GCA_000177335.1|ADFP01000090.1 Genbank CDS 28794 29696 . + 0 ID=cds-EFB90243.1;Parent=gene-HMPREF7215_2715;Dbxref=NCBI_GP:EFB90243.1;Name=EFB90243.1;Note=identified by match to protein family HMM PF03668;gbkey=CDS;locus_tag=HMPREF7215_2715;product=hypothetical protein;protein_id=EFB90243.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 29693 30832 . + . ID=gene-HMPREF7215_2716;Name=HMPREF7215_2716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2716 GCA_000177335.1|ADFP01000090.1 Genbank CDS 29693 30832 . + 0 ID=cds-EFB90244.1;Parent=gene-HMPREF7215_2716;Dbxref=NCBI_GP:EFB90244.1;Name=EFB90244.1;Note=identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826;gbkey=CDS;locus_tag=HMPREF7215_2716;product=hypothetical protein;protein_id=EFB90244.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 30829 31707 . + . ID=gene-HMPREF7215_2717;Name=HMPREF7215_2717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2717 GCA_000177335.1|ADFP01000090.1 Genbank CDS 30829 31707 . + 0 ID=cds-EFB90245.1;Parent=gene-HMPREF7215_2717;Dbxref=NCBI_GP:EFB90245.1;Name=EFB90245.1;Note=identified by match to protein family HMM PF02650;gbkey=CDS;locus_tag=HMPREF7215_2717;product=putative Uncharacterized BCR%2C COG1481;protein_id=EFB90245.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 31837 32859 . + . ID=gene-HMPREF7215_2718;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=HMPREF7215_2718 GCA_000177335.1|ADFP01000090.1 Genbank CDS 31837 32859 . + 0 ID=cds-EFB90246.1;Parent=gene-HMPREF7215_2718;Dbxref=NCBI_GP:EFB90246.1;Name=EFB90246.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=HMPREF7215_2718;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=EFB90246.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 32861 34054 . + . ID=gene-HMPREF7215_2719;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=HMPREF7215_2719 GCA_000177335.1|ADFP01000090.1 Genbank CDS 32861 34054 . + 0 ID=cds-EFB90247.1;Parent=gene-HMPREF7215_2719;Dbxref=NCBI_GP:EFB90247.1;Name=EFB90247.1;Note=identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk;locus_tag=HMPREF7215_2719;product=phosphoglycerate kinase;protein_id=EFB90247.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 34123 35031 . + . ID=gene-HMPREF7215_2720;Name=HMPREF7215_2720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2720 GCA_000177335.1|ADFP01000090.1 Genbank CDS 34123 35031 . + 0 ID=cds-EFB90248.1;Parent=gene-HMPREF7215_2720;Dbxref=NCBI_GP:EFB90248.1;Name=EFB90248.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_2720;product=radical SAM domain protein;protein_id=EFB90248.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 35086 35214 . - . ID=gene-HMPREF7215_2721;Name=HMPREF7215_2721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2721 GCA_000177335.1|ADFP01000090.1 Genbank CDS 35086 35214 . - 0 ID=cds-EFB90249.1;Parent=gene-HMPREF7215_2721;Dbxref=NCBI_GP:EFB90249.1;Name=EFB90249.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2721;product=hypothetical protein;protein_id=EFB90249.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 35180 37726 . + . ID=gene-HMPREF7215_2722;Name=HMPREF7215_2722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2722 GCA_000177335.1|ADFP01000090.1 Genbank CDS 35180 37726 . + 0 ID=cds-EFB90250.1;Parent=gene-HMPREF7215_2722;Dbxref=NCBI_GP:EFB90250.1;Name=EFB90250.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_2722;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB90250.1;transl_table=11 GCA_000177335.1|ADFP01000090.1 Genbank gene 37978 38577 . + . ID=gene-HMPREF7215_2723;Name=HMPREF7215_2723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2723 GCA_000177335.1|ADFP01000090.1 Genbank CDS 37978 38577 . + 0 ID=cds-EFB90251.1;Parent=gene-HMPREF7215_2723;Dbxref=NCBI_GP:EFB90251.1;Name=EFB90251.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2723;product=hypothetical protein;protein_id=EFB90251.1;transl_table=11 ##sequence-region ADFP01000089.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000089.1 Genbank region 1 753 . + . ID=ADFP01000089.1:1..753;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000089.1 Genbank gene 1 743 . + . ID=gene-HMPREF7215_1663;Name=HMPREF7215_1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1663;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000089.1 Genbank CDS 1 743 . + 2 ID=cds-EFB90252.1;Parent=gene-HMPREF7215_1663;Dbxref=NCBI_GP:EFB90252.1;Name=EFB90252.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1663;partial=true;product=putative modification methylase EcoRI;protein_id=EFB90252.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000088.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000088.1 Genbank region 1 606 . + . ID=ADFP01000088.1:1..606;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000088.1 Genbank gene 60 137 . - . ID=gene-HMPREF7215_1672;Name=HMPREF7215_1672;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1672 GCA_000177335.1|ADFP01000088.1 Genbank tRNA 60 137 . - . ID=rna-HMPREF7215_1672;Parent=gene-HMPREF7215_1672;gbkey=tRNA;locus_tag=HMPREF7215_1672;product=tRNA-Ala GCA_000177335.1|ADFP01000088.1 Genbank exon 60 137 . - . ID=exon-HMPREF7215_1672-1;Parent=rna-HMPREF7215_1672;gbkey=tRNA;locus_tag=HMPREF7215_1672;product=tRNA-Ala GCA_000177335.1|ADFP01000088.1 Genbank gene 150 228 . - . ID=gene-HMPREF7215_1673;Name=HMPREF7215_1673;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1673 GCA_000177335.1|ADFP01000088.1 Genbank tRNA 150 228 . - . ID=rna-HMPREF7215_1673;Parent=gene-HMPREF7215_1673;gbkey=tRNA;locus_tag=HMPREF7215_1673;product=tRNA-Ile GCA_000177335.1|ADFP01000088.1 Genbank exon 150 228 . - . ID=exon-HMPREF7215_1673-1;Parent=rna-HMPREF7215_1673;gbkey=tRNA;locus_tag=HMPREF7215_1673;product=tRNA-Ile ##sequence-region ADFP01000087.1 1 3246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000087.1 Genbank region 1 3246 . + . ID=ADFP01000087.1:1..3246;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000087.1 Genbank gene 29 469 . - . ID=gene-HMPREF7215_2070;Name=HMPREF7215_2070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2070 GCA_000177335.1|ADFP01000087.1 Genbank CDS 29 469 . - 0 ID=cds-EFB90253.1;Parent=gene-HMPREF7215_2070;Dbxref=NCBI_GP:EFB90253.1;Name=EFB90253.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2070;product=hypothetical protein;protein_id=EFB90253.1;transl_table=11 GCA_000177335.1|ADFP01000087.1 Genbank gene 689 808 . + . ID=gene-HMPREF7215_2071;Name=HMPREF7215_2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2071 GCA_000177335.1|ADFP01000087.1 Genbank CDS 689 808 . + 0 ID=cds-EFB90254.1;Parent=gene-HMPREF7215_2071;Dbxref=NCBI_GP:EFB90254.1;Name=EFB90254.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2071;product=hypothetical protein;protein_id=EFB90254.1;transl_table=11 GCA_000177335.1|ADFP01000087.1 Genbank gene 832 1260 . - . ID=gene-HMPREF7215_2072;Name=HMPREF7215_2072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2072 GCA_000177335.1|ADFP01000087.1 Genbank CDS 832 1260 . - 0 ID=cds-EFB90255.1;Parent=gene-HMPREF7215_2072;Dbxref=NCBI_GP:EFB90255.1;Name=EFB90255.1;gbkey=CDS;locus_tag=HMPREF7215_2072;product=hypothetical protein;protein_id=EFB90255.1;transl_table=11 GCA_000177335.1|ADFP01000087.1 Genbank gene 1257 1484 . - . ID=gene-HMPREF7215_2073;Name=HMPREF7215_2073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2073 GCA_000177335.1|ADFP01000087.1 Genbank CDS 1257 1484 . - 0 ID=cds-EFB90256.1;Parent=gene-HMPREF7215_2073;Dbxref=NCBI_GP:EFB90256.1;Name=EFB90256.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2073;product=hypothetical protein;protein_id=EFB90256.1;transl_table=11 GCA_000177335.1|ADFP01000087.1 Genbank gene 1644 1937 . - . ID=gene-HMPREF7215_2074;Name=HMPREF7215_2074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2074 GCA_000177335.1|ADFP01000087.1 Genbank CDS 1644 1937 . - 0 ID=cds-EFB90257.1;Parent=gene-HMPREF7215_2074;Dbxref=NCBI_GP:EFB90257.1;Name=EFB90257.1;gbkey=CDS;locus_tag=HMPREF7215_2074;product=hypothetical protein;protein_id=EFB90257.1;transl_table=11 GCA_000177335.1|ADFP01000087.1 Genbank gene 2172 3107 . - . ID=gene-HMPREF7215_2075;Name=HMPREF7215_2075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2075 GCA_000177335.1|ADFP01000087.1 Genbank CDS 2172 3107 . - 0 ID=cds-EFB90258.1;Parent=gene-HMPREF7215_2075;Dbxref=NCBI_GP:EFB90258.1;Name=EFB90258.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00892%3B match to protein family HMM PF08449;gbkey=CDS;locus_tag=HMPREF7215_2075;product=putative membrane protein;protein_id=EFB90258.1;transl_table=11 ##sequence-region ADFP01000086.1 1 72365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000086.1 Genbank region 1 72365 . + . ID=ADFP01000086.1:1..72365;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000086.1 Genbank gene 401 1573 . - . ID=gene-HMPREF7215_1170;Name=HMPREF7215_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1170 GCA_000177335.1|ADFP01000086.1 Genbank CDS 401 1573 . - 0 ID=cds-EFB90259.1;Parent=gene-HMPREF7215_1170;Dbxref=NCBI_GP:EFB90259.1;Name=EFB90259.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_1170;product=4Fe-4S binding domain protein;protein_id=EFB90259.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 1746 4052 . + . ID=gene-HMPREF7215_1171;Name=HMPREF7215_1171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1171 GCA_000177335.1|ADFP01000086.1 Genbank CDS 1746 4052 . + 0 ID=cds-EFB90260.1;Parent=gene-HMPREF7215_1171;Dbxref=NCBI_GP:EFB90260.1;Name=EFB90260.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;locus_tag=HMPREF7215_1171;product=transporter%2C small conductance mechanosensitive ion channel MscS family protein;protein_id=EFB90260.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 4308 4895 . - . ID=gene-HMPREF7215_1172;Name=HMPREF7215_1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1172 GCA_000177335.1|ADFP01000086.1 Genbank CDS 4308 4895 . - 0 ID=cds-EFB90261.1;Parent=gene-HMPREF7215_1172;Dbxref=NCBI_GP:EFB90261.1;Name=EFB90261.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF7215_1172;product=transcriptional regulator%2C TetR family;protein_id=EFB90261.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 5235 6671 . - . ID=gene-HMPREF7215_1173;Name=HMPREF7215_1173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1173 GCA_000177335.1|ADFP01000086.1 Genbank CDS 5235 6671 . - 0 ID=cds-EFB90262.1;Parent=gene-HMPREF7215_1173;Dbxref=NCBI_GP:EFB90262.1;Name=EFB90262.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF7215_1173;product=hypothetical protein;protein_id=EFB90262.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 6904 7248 . - . ID=gene-HMPREF7215_1174;Name=HMPREF7215_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1174 GCA_000177335.1|ADFP01000086.1 Genbank CDS 6904 7248 . - 0 ID=cds-EFB90263.1;Parent=gene-HMPREF7215_1174;Dbxref=NCBI_GP:EFB90263.1;Name=EFB90263.1;Note=identified by match to protein family HMM PF01527;gbkey=CDS;locus_tag=HMPREF7215_1174;product=transposase;protein_id=EFB90263.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 7280 7465 . + . ID=gene-HMPREF7215_1175;Name=HMPREF7215_1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1175 GCA_000177335.1|ADFP01000086.1 Genbank CDS 7280 7465 . + 0 ID=cds-EFB90264.1;Parent=gene-HMPREF7215_1175;Dbxref=NCBI_GP:EFB90264.1;Name=EFB90264.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1175;product=hypothetical protein;protein_id=EFB90264.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 7773 8249 . - . ID=gene-HMPREF7215_1176;Name=HMPREF7215_1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1176 GCA_000177335.1|ADFP01000086.1 Genbank CDS 7773 8249 . - 0 ID=cds-EFB90265.1;Parent=gene-HMPREF7215_1176;Dbxref=NCBI_GP:EFB90265.1;Name=EFB90265.1;Note=identified by match to protein family HMM PF04074%3B match to protein family HMM TIGR00022;gbkey=CDS;locus_tag=HMPREF7215_1176;product=YhcH/YjgK/YiaL family protein;protein_id=EFB90265.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 8281 9474 . - . ID=gene-HMPREF7215_1177;Name=HMPREF7215_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1177 GCA_000177335.1|ADFP01000086.1 Genbank CDS 8281 9474 . - 0 ID=cds-EFB90266.1;Parent=gene-HMPREF7215_1177;Dbxref=NCBI_GP:EFB90266.1;Name=EFB90266.1;gbkey=CDS;locus_tag=HMPREF7215_1177;product=hypothetical protein;protein_id=EFB90266.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 9473 9619 . + . ID=gene-HMPREF7215_1178;Name=HMPREF7215_1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1178 GCA_000177335.1|ADFP01000086.1 Genbank CDS 9473 9619 . + 0 ID=cds-EFB90267.1;Parent=gene-HMPREF7215_1178;Dbxref=NCBI_GP:EFB90267.1;Name=EFB90267.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1178;product=hypothetical protein;protein_id=EFB90267.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 9622 11673 . + . ID=gene-HMPREF7215_1179;Name=HMPREF7215_1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1179 GCA_000177335.1|ADFP01000086.1 Genbank CDS 9622 11673 . + 0 ID=cds-EFB90268.1;Parent=gene-HMPREF7215_1179;Dbxref=NCBI_GP:EFB90268.1;Name=EFB90268.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01464;gbkey=CDS;locus_tag=HMPREF7215_1179;product=transglycosylase SLT domain protein;protein_id=EFB90268.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 11666 12310 . + . ID=gene-HMPREF7215_1180;Name=HMPREF7215_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1180 GCA_000177335.1|ADFP01000086.1 Genbank CDS 11666 12310 . + 0 ID=cds-EFB90269.1;Parent=gene-HMPREF7215_1180;Dbxref=NCBI_GP:EFB90269.1;Name=EFB90269.1;Note=identified by match to protein family HMM PF04263%3B match to protein family HMM TIGR01378;gbkey=CDS;locus_tag=HMPREF7215_1180;product=thiamine diphosphokinase;protein_id=EFB90269.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank binding_site 12348 12458 . + . ID=id-ADFP01000086.1:12348..12458;Note=TPP riboswitch (THI element)%3B Rfam score 51.07;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 GCA_000177335.1|ADFP01000086.1 Genbank gene 12425 12544 . - . ID=gene-HMPREF7215_1181;Name=HMPREF7215_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1181 GCA_000177335.1|ADFP01000086.1 Genbank CDS 12425 12544 . - 0 ID=cds-EFB90270.1;Parent=gene-HMPREF7215_1181;Dbxref=NCBI_GP:EFB90270.1;Name=EFB90270.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1181;product=hypothetical protein;protein_id=EFB90270.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 12566 13207 . + . ID=gene-HMPREF7215_1183;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1183 GCA_000177335.1|ADFP01000086.1 Genbank CDS 12566 13207 . + 0 ID=cds-EFB90271.1;Parent=gene-HMPREF7215_1183;Dbxref=NCBI_GP:EFB90271.1;Name=EFB90271.1;Note=identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693;gbkey=CDS;gene=thiE;locus_tag=HMPREF7215_1183;product=thiamine-phosphate diphosphorylase;protein_id=EFB90271.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 13234 14028 . + . ID=gene-HMPREF7215_1184;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1184 GCA_000177335.1|ADFP01000086.1 Genbank CDS 13234 14028 . + 0 ID=cds-EFB90272.1;Parent=gene-HMPREF7215_1184;Dbxref=NCBI_GP:EFB90272.1;Name=EFB90272.1;Note=identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097;gbkey=CDS;gene=thiD;locus_tag=HMPREF7215_1184;product=phosphomethylpyrimidine kinase;protein_id=EFB90272.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 14161 15792 . + . ID=gene-HMPREF7215_1185;Name=HMPREF7215_1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1185 GCA_000177335.1|ADFP01000086.1 Genbank CDS 14161 15792 . + 0 ID=cds-EFB90273.1;Parent=gene-HMPREF7215_1185;Dbxref=NCBI_GP:EFB90273.1;Name=EFB90273.1;Note=identified by match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1185;product=amidohydrolase family protein;protein_id=EFB90273.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 15848 17224 . + . ID=gene-HMPREF7215_1186;Name=HMPREF7215_1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1186 GCA_000177335.1|ADFP01000086.1 Genbank CDS 15848 17224 . + 0 ID=cds-EFB90274.1;Parent=gene-HMPREF7215_1186;Dbxref=NCBI_GP:EFB90274.1;Name=EFB90274.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF7215_1186;product=amino acid permease;protein_id=EFB90274.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 17310 18935 . + . ID=gene-HMPREF7215_1187;Name=HMPREF7215_1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1187 GCA_000177335.1|ADFP01000086.1 Genbank CDS 17310 18935 . + 0 ID=cds-EFB90275.1;Parent=gene-HMPREF7215_1187;Dbxref=NCBI_GP:EFB90275.1;Name=EFB90275.1;Note=identified by match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1187;product=amidohydrolase family protein;protein_id=EFB90275.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 19089 19814 . + . ID=gene-HMPREF7215_1188;Name=HMPREF7215_1188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1188 GCA_000177335.1|ADFP01000086.1 Genbank CDS 19089 19814 . + 0 ID=cds-EFB90276.1;Parent=gene-HMPREF7215_1188;Dbxref=NCBI_GP:EFB90276.1;Name=EFB90276.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;locus_tag=HMPREF7215_1188;product=hypothetical protein;protein_id=EFB90276.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 19931 20656 . + . ID=gene-HMPREF7215_1190;Name=HMPREF7215_1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1190 GCA_000177335.1|ADFP01000086.1 Genbank CDS 19931 20656 . + 0 ID=cds-EFB90277.1;Parent=gene-HMPREF7215_1190;Dbxref=NCBI_GP:EFB90277.1;Name=EFB90277.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;locus_tag=HMPREF7215_1190;product=hypothetical protein;protein_id=EFB90277.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 20649 20822 . - . ID=gene-HMPREF7215_1189;Name=HMPREF7215_1189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1189 GCA_000177335.1|ADFP01000086.1 Genbank CDS 20649 20822 . - 0 ID=cds-EFB90278.1;Parent=gene-HMPREF7215_1189;Dbxref=NCBI_GP:EFB90278.1;Name=EFB90278.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1189;product=hypothetical protein;protein_id=EFB90278.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 20798 21988 . - . ID=gene-HMPREF7215_1191;Name=HMPREF7215_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1191 GCA_000177335.1|ADFP01000086.1 Genbank CDS 20798 21988 . - 0 ID=cds-EFB90279.1;Parent=gene-HMPREF7215_1191;Dbxref=NCBI_GP:EFB90279.1;Name=EFB90279.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1191;product=amidohydrolase;protein_id=EFB90279.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 21990 23183 . - . ID=gene-HMPREF7215_1192;Name=HMPREF7215_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1192 GCA_000177335.1|ADFP01000086.1 Genbank CDS 21990 23183 . - 0 ID=cds-EFB90280.1;Parent=gene-HMPREF7215_1192;Dbxref=NCBI_GP:EFB90280.1;Name=EFB90280.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1192;product=amidohydrolase;protein_id=EFB90280.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 23251 23934 . - . ID=gene-HMPREF7215_1193;Name=HMPREF7215_1193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1193 GCA_000177335.1|ADFP01000086.1 Genbank CDS 23251 23934 . - 0 ID=cds-EFB90281.1;Parent=gene-HMPREF7215_1193;Dbxref=NCBI_GP:EFB90281.1;Name=EFB90281.1;gbkey=CDS;locus_tag=HMPREF7215_1193;product=hypothetical protein;protein_id=EFB90281.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 23959 24705 . - . ID=gene-HMPREF7215_1194;Name=HMPREF7215_1194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1194 GCA_000177335.1|ADFP01000086.1 Genbank CDS 23959 24705 . - 0 ID=cds-EFB90282.1;Parent=gene-HMPREF7215_1194;Dbxref=NCBI_GP:EFB90282.1;Name=EFB90282.1;gbkey=CDS;locus_tag=HMPREF7215_1194;product=hypothetical protein;protein_id=EFB90282.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 24887 26515 . - . ID=gene-HMPREF7215_1195;Name=HMPREF7215_1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1195 GCA_000177335.1|ADFP01000086.1 Genbank CDS 24887 26515 . - 0 ID=cds-EFB90283.1;Parent=gene-HMPREF7215_1195;Dbxref=NCBI_GP:EFB90283.1;Name=EFB90283.1;Note=identified by match to protein family HMM PF07905;gbkey=CDS;locus_tag=HMPREF7215_1195;product=purine catabolism regulatory protein-like family;protein_id=EFB90283.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 26532 26699 . - . ID=gene-HMPREF7215_1196;Name=HMPREF7215_1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1196 GCA_000177335.1|ADFP01000086.1 Genbank CDS 26532 26699 . - 0 ID=cds-EFB90284.1;Parent=gene-HMPREF7215_1196;Dbxref=NCBI_GP:EFB90284.1;Name=EFB90284.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1196;product=hypothetical protein;protein_id=EFB90284.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 26902 27594 . + . ID=gene-HMPREF7215_1197;Name=HMPREF7215_1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1197 GCA_000177335.1|ADFP01000086.1 Genbank CDS 26902 27594 . + 0 ID=cds-EFB90285.1;Parent=gene-HMPREF7215_1197;Dbxref=NCBI_GP:EFB90285.1;Name=EFB90285.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1197;product=hypothetical protein;protein_id=EFB90285.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 27761 29023 . - . ID=gene-HMPREF7215_1198;Name=HMPREF7215_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1198 GCA_000177335.1|ADFP01000086.1 Genbank CDS 27761 29023 . - 0 ID=cds-EFB90286.1;Parent=gene-HMPREF7215_1198;Dbxref=NCBI_GP:EFB90286.1;Name=EFB90286.1;gbkey=CDS;locus_tag=HMPREF7215_1198;product=hypothetical protein;protein_id=EFB90286.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 29172 29324 . - . ID=gene-HMPREF7215_1199;Name=HMPREF7215_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1199 GCA_000177335.1|ADFP01000086.1 Genbank CDS 29172 29324 . - 0 ID=cds-EFB90287.1;Parent=gene-HMPREF7215_1199;Dbxref=NCBI_GP:EFB90287.1;Name=EFB90287.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1199;product=hypothetical protein;protein_id=EFB90287.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 29371 30198 . - . ID=gene-HMPREF7215_1200;Name=HMPREF7215_1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1200 GCA_000177335.1|ADFP01000086.1 Genbank CDS 29371 30198 . - 0 ID=cds-EFB90288.1;Parent=gene-HMPREF7215_1200;Dbxref=NCBI_GP:EFB90288.1;Name=EFB90288.1;Note=identified by match to protein family HMM PF03099;gbkey=CDS;locus_tag=HMPREF7215_1200;product=biotin/lipoate A/B protein ligase family protein;protein_id=EFB90288.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 30179 31216 . - . ID=gene-HMPREF7215_1201;Name=HMPREF7215_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1201 GCA_000177335.1|ADFP01000086.1 Genbank CDS 30179 31216 . - 0 ID=cds-EFB90289.1;Parent=gene-HMPREF7215_1201;Dbxref=NCBI_GP:EFB90289.1;Name=EFB90289.1;Note=identified by match to protein family HMM PF04055%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_1201;product=radical SAM domain protein;protein_id=EFB90289.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 31213 32112 . - . ID=gene-HMPREF7215_1202;Name=HMPREF7215_1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1202 GCA_000177335.1|ADFP01000086.1 Genbank CDS 31213 32112 . - 0 ID=cds-EFB90290.1;Parent=gene-HMPREF7215_1202;Dbxref=NCBI_GP:EFB90290.1;Name=EFB90290.1;Note=identified by match to protein family HMM PF04055%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_1202;product=radical SAM domain protein;protein_id=EFB90290.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 32444 33535 . + . ID=gene-HMPREF7215_1203;Name=HMPREF7215_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1203 GCA_000177335.1|ADFP01000086.1 Genbank CDS 32444 33535 . + 0 ID=cds-EFB90291.1;Parent=gene-HMPREF7215_1203;Dbxref=NCBI_GP:EFB90291.1;Name=EFB90291.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_1203;product=aminotransferase%2C class I/II;protein_id=EFB90291.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 33675 34772 . + . ID=gene-HMPREF7215_1204;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=HMPREF7215_1204 GCA_000177335.1|ADFP01000086.1 Genbank CDS 33675 34772 . + 0 ID=cds-EFB90292.1;Parent=gene-HMPREF7215_1204;Dbxref=NCBI_GP:EFB90292.1;Name=EFB90292.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048;gbkey=CDS;gene=rlmN;locus_tag=HMPREF7215_1204;product=23S rRNA m2A2503 methyltransferase;protein_id=EFB90292.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 34773 35141 . + . ID=gene-HMPREF7215_1205;Name=HMPREF7215_1205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1205 GCA_000177335.1|ADFP01000086.1 Genbank CDS 34773 35141 . + 0 ID=cds-EFB90293.1;Parent=gene-HMPREF7215_1205;Dbxref=NCBI_GP:EFB90293.1;Name=EFB90293.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1205;product=hypothetical protein;protein_id=EFB90293.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 35353 35493 . + . ID=gene-HMPREF7215_1206;Name=HMPREF7215_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1206 GCA_000177335.1|ADFP01000086.1 Genbank CDS 35353 35493 . + 0 ID=cds-EFB90294.1;Parent=gene-HMPREF7215_1206;Dbxref=NCBI_GP:EFB90294.1;Name=EFB90294.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1206;product=hypothetical protein;protein_id=EFB90294.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 35647 36072 . + . ID=gene-HMPREF7215_1207;Name=HMPREF7215_1207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1207 GCA_000177335.1|ADFP01000086.1 Genbank CDS 35647 36072 . + 0 ID=cds-EFB90295.1;Parent=gene-HMPREF7215_1207;Dbxref=NCBI_GP:EFB90295.1;Name=EFB90295.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF07702;gbkey=CDS;locus_tag=HMPREF7215_1207;product=UbiC transcription regulator-associated domain protein;protein_id=EFB90295.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 36217 36351 . + . ID=gene-HMPREF7215_1208;Name=HMPREF7215_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1208 GCA_000177335.1|ADFP01000086.1 Genbank CDS 36217 36351 . + 0 ID=cds-EFB90296.1;Parent=gene-HMPREF7215_1208;Dbxref=NCBI_GP:EFB90296.1;Name=EFB90296.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1208;product=hypothetical protein;protein_id=EFB90296.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 36358 37338 . - . ID=gene-HMPREF7215_1209;Name=HMPREF7215_1209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1209 GCA_000177335.1|ADFP01000086.1 Genbank CDS 36358 37338 . - 0 ID=cds-EFB90297.1;Parent=gene-HMPREF7215_1209;Dbxref=NCBI_GP:EFB90297.1;Name=EFB90297.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1209;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90297.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 37341 38324 . - . ID=gene-HMPREF7215_1210;Name=HMPREF7215_1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1210 GCA_000177335.1|ADFP01000086.1 Genbank CDS 37341 38324 . - 0 ID=cds-EFB90298.1;Parent=gene-HMPREF7215_1210;Dbxref=NCBI_GP:EFB90298.1;Name=EFB90298.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1210;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90298.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 38343 39254 . - . ID=gene-HMPREF7215_1211;Name=HMPREF7215_1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1211 GCA_000177335.1|ADFP01000086.1 Genbank CDS 38343 39254 . - 0 ID=cds-EFB90299.1;Parent=gene-HMPREF7215_1211;Dbxref=NCBI_GP:EFB90299.1;Name=EFB90299.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1211;product=ABC transporter%2C permease protein;protein_id=EFB90299.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 39255 40229 . - . ID=gene-HMPREF7215_1212;Name=HMPREF7215_1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1212 GCA_000177335.1|ADFP01000086.1 Genbank CDS 39255 40229 . - 0 ID=cds-EFB90300.1;Parent=gene-HMPREF7215_1212;Dbxref=NCBI_GP:EFB90300.1;Name=EFB90300.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1212;product=ABC transporter%2C permease protein;protein_id=EFB90300.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 40336 41823 . - . ID=gene-HMPREF7215_1213;Name=HMPREF7215_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1213 GCA_000177335.1|ADFP01000086.1 Genbank CDS 40336 41823 . - 0 ID=cds-EFB90301.1;Parent=gene-HMPREF7215_1213;Dbxref=NCBI_GP:EFB90301.1;Name=EFB90301.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1213;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB90301.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 41902 42573 . - . ID=gene-HMPREF7215_1214;Name=HMPREF7215_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1214 GCA_000177335.1|ADFP01000086.1 Genbank CDS 41902 42573 . - 0 ID=cds-EFB90302.1;Parent=gene-HMPREF7215_1214;Dbxref=NCBI_GP:EFB90302.1;Name=EFB90302.1;Note=identified by match to protein family HMM PF03737;gbkey=CDS;locus_tag=HMPREF7215_1214;product=demethylmenaquinone methyltransferase;protein_id=EFB90302.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 42583 43407 . - . ID=gene-HMPREF7215_1215;Name=HMPREF7215_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1215 GCA_000177335.1|ADFP01000086.1 Genbank CDS 42583 43407 . - 0 ID=cds-EFB90303.1;Parent=gene-HMPREF7215_1215;Dbxref=NCBI_GP:EFB90303.1;Name=EFB90303.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=HMPREF7215_1215;product=hydrolase%2C carbon-nitrogen family;protein_id=EFB90303.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 43449 44174 . - . ID=gene-HMPREF7215_1216;Name=HMPREF7215_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1216 GCA_000177335.1|ADFP01000086.1 Genbank CDS 43449 44174 . - 0 ID=cds-EFB90304.1;Parent=gene-HMPREF7215_1216;Dbxref=NCBI_GP:EFB90304.1;Name=EFB90304.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;locus_tag=HMPREF7215_1216;product=creatininase;protein_id=EFB90304.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 44178 44306 . - . ID=gene-HMPREF7215_1217;Name=HMPREF7215_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1217 GCA_000177335.1|ADFP01000086.1 Genbank CDS 44178 44306 . - 0 ID=cds-EFB90305.1;Parent=gene-HMPREF7215_1217;Dbxref=NCBI_GP:EFB90305.1;Name=EFB90305.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1217;product=hypothetical protein;protein_id=EFB90305.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 44428 45867 . + . ID=gene-HMPREF7215_1218;Name=HMPREF7215_1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1218 GCA_000177335.1|ADFP01000086.1 Genbank CDS 44428 45867 . + 0 ID=cds-EFB90306.1;Parent=gene-HMPREF7215_1218;Dbxref=NCBI_GP:EFB90306.1;Name=EFB90306.1;Note=identified by match to protein family HMM PF02347;gbkey=CDS;locus_tag=HMPREF7215_1218;product=glycine dehydrogenase subunit 1;protein_id=EFB90306.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 45864 47426 . + . ID=gene-HMPREF7215_1219;Name=HMPREF7215_1219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1219 GCA_000177335.1|ADFP01000086.1 Genbank CDS 45864 47426 . + 0 ID=cds-EFB90307.1;Parent=gene-HMPREF7215_1219;Dbxref=NCBI_GP:EFB90307.1;Name=EFB90307.1;gbkey=CDS;locus_tag=HMPREF7215_1219;product=putative glycine dehydrogenase subunit 2;protein_id=EFB90307.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 47630 48628 . - . ID=gene-HMPREF7215_1220;Name=HMPREF7215_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1220 GCA_000177335.1|ADFP01000086.1 Genbank CDS 47630 48628 . - 0 ID=cds-EFB90308.1;Parent=gene-HMPREF7215_1220;Dbxref=NCBI_GP:EFB90308.1;Name=EFB90308.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545;gbkey=CDS;locus_tag=HMPREF7215_1220;product=lipoyltransferase and lipoate-protein ligase;protein_id=EFB90308.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 48764 49867 . - . ID=gene-HMPREF7215_1221;Name=HMPREF7215_1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1221 GCA_000177335.1|ADFP01000086.1 Genbank CDS 48764 49867 . - 0 ID=cds-EFB90309.1;Parent=gene-HMPREF7215_1221;Dbxref=NCBI_GP:EFB90309.1;Name=EFB90309.1;Note=identified by match to protein family HMM PF00465%3B match to protein family HMM PF01761;gbkey=CDS;locus_tag=HMPREF7215_1221;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFB90309.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 50083 50880 . - . ID=gene-HMPREF7215_1222;Name=HMPREF7215_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1222 GCA_000177335.1|ADFP01000086.1 Genbank CDS 50083 50880 . - 0 ID=cds-EFB90310.1;Parent=gene-HMPREF7215_1222;Dbxref=NCBI_GP:EFB90310.1;Name=EFB90310.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF7215_1222;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFB90310.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 51048 52451 . - . ID=gene-HMPREF7215_1223;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1223 GCA_000177335.1|ADFP01000086.1 Genbank CDS 51048 52451 . - 0 ID=cds-EFB90311.1;Parent=gene-HMPREF7215_1223;Dbxref=NCBI_GP:EFB90311.1;Name=EFB90311.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350;gbkey=CDS;gene=lpdA;locus_tag=HMPREF7215_1223;product=dihydrolipoyl dehydrogenase;protein_id=EFB90311.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 52491 53345 . - . ID=gene-HMPREF7215_1224;Name=HMPREF7215_1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1224 GCA_000177335.1|ADFP01000086.1 Genbank CDS 52491 53345 . - 0 ID=cds-EFB90312.1;Parent=gene-HMPREF7215_1224;Dbxref=NCBI_GP:EFB90312.1;Name=EFB90312.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF7215_1224;product=response regulator receiver domain protein;protein_id=EFB90312.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 53360 54682 . - . ID=gene-HMPREF7215_1225;Name=HMPREF7215_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1225 GCA_000177335.1|ADFP01000086.1 Genbank CDS 53360 54682 . - 0 ID=cds-EFB90313.1;Parent=gene-HMPREF7215_1225;Dbxref=NCBI_GP:EFB90313.1;Name=EFB90313.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580;gbkey=CDS;locus_tag=HMPREF7215_1225;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB90313.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 54852 55202 . + . ID=gene-HMPREF7215_1226;Name=HMPREF7215_1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1226 GCA_000177335.1|ADFP01000086.1 Genbank CDS 54852 55202 . + 0 ID=cds-EFB90314.1;Parent=gene-HMPREF7215_1226;Dbxref=NCBI_GP:EFB90314.1;Name=EFB90314.1;Note=identified by match to protein family HMM PF09585%3B match to protein family HMM TIGR02058;gbkey=CDS;locus_tag=HMPREF7215_1226;product=hypothetical protein;protein_id=EFB90314.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 55253 56212 . + . ID=gene-HMPREF7215_1227;Name=acoA;gbkey=Gene;gene=acoA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1227 GCA_000177335.1|ADFP01000086.1 Genbank CDS 55253 56212 . + 0 ID=cds-EFB90315.1;Parent=gene-HMPREF7215_1227;Dbxref=NCBI_GP:EFB90315.1;Name=EFB90315.1;Note=identified by match to protein family HMM PF00676;gbkey=CDS;gene=acoA;locus_tag=HMPREF7215_1227;product=TPP-dependent acetoin dehydrogenase complex%2C E1 component%2C alpha subunit;protein_id=EFB90315.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 56249 57226 . + . ID=gene-HMPREF7215_1228;Name=HMPREF7215_1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1228 GCA_000177335.1|ADFP01000086.1 Genbank CDS 56249 57226 . + 0 ID=cds-EFB90316.1;Parent=gene-HMPREF7215_1228;Dbxref=NCBI_GP:EFB90316.1;Name=EFB90316.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF7215_1228;product=Transketolase%2C pyridine binding domain protein;protein_id=EFB90316.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 57246 58277 . + . ID=gene-HMPREF7215_1229;Name=HMPREF7215_1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1229 GCA_000177335.1|ADFP01000086.1 Genbank CDS 57246 58277 . + 0 ID=cds-EFB90317.1;Parent=gene-HMPREF7215_1229;Dbxref=NCBI_GP:EFB90317.1;Name=EFB90317.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;locus_tag=HMPREF7215_1229;product=NAD(+)/NADH kinase;protein_id=EFB90317.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 58297 59490 . + . ID=gene-HMPREF7215_1230;Name=HMPREF7215_1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1230 GCA_000177335.1|ADFP01000086.1 Genbank CDS 58297 59490 . + 0 ID=cds-EFB90318.1;Parent=gene-HMPREF7215_1230;Dbxref=NCBI_GP:EFB90318.1;Name=EFB90318.1;Note=identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817%3B dihydrolipoyllysine-residue acetyltransferase component of acetoincleaving system (Acetoin dehydrogenase E2 component)(Dihydrolipoamide acetyltransferase component of acetoin cleavingsystem);gbkey=CDS;locus_tag=HMPREF7215_1230;product=putative pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;protein_id=EFB90318.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 59514 59708 . + . ID=gene-HMPREF7215_1231;Name=HMPREF7215_1231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1231 GCA_000177335.1|ADFP01000086.1 Genbank CDS 59514 59708 . + 0 ID=cds-EFB90319.1;Parent=gene-HMPREF7215_1231;Dbxref=NCBI_GP:EFB90319.1;Name=EFB90319.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1231;product=hypothetical protein;protein_id=EFB90319.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 59715 59918 . - . ID=gene-HMPREF7215_1232;Name=HMPREF7215_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1232 GCA_000177335.1|ADFP01000086.1 Genbank CDS 59715 59918 . - 0 ID=cds-EFB90320.1;Parent=gene-HMPREF7215_1232;Dbxref=NCBI_GP:EFB90320.1;Name=EFB90320.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1232;product=hypothetical protein;protein_id=EFB90320.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 60041 61279 . - . ID=gene-HMPREF7215_1233;Name=HMPREF7215_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1233 GCA_000177335.1|ADFP01000086.1 Genbank CDS 60041 61279 . - 0 ID=cds-EFB90321.1;Parent=gene-HMPREF7215_1233;Dbxref=NCBI_GP:EFB90321.1;Name=EFB90321.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF7215_1233;product=transporter%2C major facilitator family protein;protein_id=EFB90321.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 61328 61933 . - . ID=gene-HMPREF7215_1234;Name=HMPREF7215_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1234 GCA_000177335.1|ADFP01000086.1 Genbank CDS 61328 61933 . - 0 ID=cds-EFB90322.1;Parent=gene-HMPREF7215_1234;Dbxref=NCBI_GP:EFB90322.1;Name=EFB90322.1;gbkey=CDS;locus_tag=HMPREF7215_1234;product=putative Cobalt-zinc-cadmium resistance protein CzcN;protein_id=EFB90322.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 61947 62078 . - . ID=gene-HMPREF7215_1235;Name=HMPREF7215_1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1235 GCA_000177335.1|ADFP01000086.1 Genbank CDS 61947 62078 . - 0 ID=cds-EFB90323.1;Parent=gene-HMPREF7215_1235;Dbxref=NCBI_GP:EFB90323.1;Name=EFB90323.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1235;product=hypothetical protein;protein_id=EFB90323.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 62270 62965 . - . ID=gene-HMPREF7215_1236;Name=HMPREF7215_1236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1236 GCA_000177335.1|ADFP01000086.1 Genbank CDS 62270 62965 . - 0 ID=cds-EFB90324.1;Parent=gene-HMPREF7215_1236;Dbxref=NCBI_GP:EFB90324.1;Name=EFB90324.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF7215_1236;product=response regulator receiver domain protein;protein_id=EFB90324.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 62967 64478 . - . ID=gene-HMPREF7215_1237;Name=HMPREF7215_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1237 GCA_000177335.1|ADFP01000086.1 Genbank CDS 62967 64478 . - 0 ID=cds-EFB90325.1;Parent=gene-HMPREF7215_1237;Dbxref=NCBI_GP:EFB90325.1;Name=EFB90325.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF7215_1237;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB90325.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 64472 64726 . + . ID=gene-HMPREF7215_1238;Name=HMPREF7215_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1238 GCA_000177335.1|ADFP01000086.1 Genbank CDS 64472 64726 . + 0 ID=cds-EFB90326.1;Parent=gene-HMPREF7215_1238;Dbxref=NCBI_GP:EFB90326.1;Name=EFB90326.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1238;product=hypothetical protein;protein_id=EFB90326.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 64723 65595 . + . ID=gene-HMPREF7215_1239;Name=HMPREF7215_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1239 GCA_000177335.1|ADFP01000086.1 Genbank CDS 64723 65595 . + 0 ID=cds-EFB90327.1;Parent=gene-HMPREF7215_1239;Dbxref=NCBI_GP:EFB90327.1;Name=EFB90327.1;Note=identified by match to protein family HMM PF00376%3B match to protein family HMM PF06445;gbkey=CDS;locus_tag=HMPREF7215_1239;product=transcriptional regulator%2C MerR family;protein_id=EFB90327.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 65673 66113 . + . ID=gene-HMPREF7215_1240;Name=HMPREF7215_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1240 GCA_000177335.1|ADFP01000086.1 Genbank CDS 65673 66113 . + 0 ID=cds-EFB90328.1;Parent=gene-HMPREF7215_1240;Dbxref=NCBI_GP:EFB90328.1;Name=EFB90328.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;locus_tag=HMPREF7215_1240;product=transcriptional regulator%2C MerR family;protein_id=EFB90328.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 66211 66429 . - . ID=gene-HMPREF7215_1241;Name=HMPREF7215_1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1241 GCA_000177335.1|ADFP01000086.1 Genbank CDS 66211 66429 . - 0 ID=cds-EFB90329.1;Parent=gene-HMPREF7215_1241;Dbxref=NCBI_GP:EFB90329.1;Name=EFB90329.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1241;product=hypothetical protein;protein_id=EFB90329.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 66397 67740 . + . ID=gene-HMPREF7215_1242;Name=rnfC;gbkey=Gene;gene=rnfC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1242 GCA_000177335.1|ADFP01000086.1 Genbank CDS 66397 67740 . + 0 ID=cds-EFB90330.1;Parent=gene-HMPREF7215_1242;Dbxref=NCBI_GP:EFB90330.1;Name=EFB90330.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512%3B match to protein family HMM TIGR01945;gbkey=CDS;gene=rnfC;locus_tag=HMPREF7215_1242;product=electron transport complex%2C RnfABCDGE type%2C C subunit;protein_id=EFB90330.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 67740 68678 . + . ID=gene-HMPREF7215_1243;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1243 GCA_000177335.1|ADFP01000086.1 Genbank CDS 67740 68678 . + 0 ID=cds-EFB90331.1;Parent=gene-HMPREF7215_1243;Dbxref=NCBI_GP:EFB90331.1;Name=EFB90331.1;Note=identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01946;gbkey=CDS;gene=rnfD;locus_tag=HMPREF7215_1243;product=electron transport complex%2C RnfABCDGE type%2C D subunit;protein_id=EFB90331.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 68662 69234 . + . ID=gene-HMPREF7215_1244;Name=rnfG;gbkey=Gene;gene=rnfG;gene_biotype=protein_coding;locus_tag=HMPREF7215_1244 GCA_000177335.1|ADFP01000086.1 Genbank CDS 68662 69234 . + 0 ID=cds-EFB90332.1;Parent=gene-HMPREF7215_1244;Dbxref=NCBI_GP:EFB90332.1;Name=EFB90332.1;Note=identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01947;gbkey=CDS;gene=rnfG;locus_tag=HMPREF7215_1244;product=electron transport complex%2C RnfABCDGE type%2C G subunit;protein_id=EFB90332.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 69235 69966 . + . ID=gene-HMPREF7215_1245;Name=rnfE;gbkey=Gene;gene=rnfE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1245 GCA_000177335.1|ADFP01000086.1 Genbank CDS 69235 69966 . + 0 ID=cds-EFB90333.1;Parent=gene-HMPREF7215_1245;Dbxref=NCBI_GP:EFB90333.1;Name=EFB90333.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948%3B na(+)-translocating NADH-quinone reductase subunit d (na(+)-translocating nqr subunit d) (na(+)-nqr subunit d) (nqr complex subunit d) (nqr-1 subunit d);gbkey=CDS;gene=rnfE;locus_tag=HMPREF7215_1245;product=electron transport complex%2C RnfABCDGE type%2C E subunit;protein_id=EFB90333.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 69963 70541 . + . ID=gene-HMPREF7215_1246;Name=rnfA;gbkey=Gene;gene=rnfA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1246 GCA_000177335.1|ADFP01000086.1 Genbank CDS 69963 70541 . + 0 ID=cds-EFB90334.1;Parent=gene-HMPREF7215_1246;Dbxref=NCBI_GP:EFB90334.1;Name=EFB90334.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01943;gbkey=CDS;gene=rnfA;locus_tag=HMPREF7215_1246;product=electron transport complex%2C RnfABCDGE type%2C A subunit;protein_id=EFB90334.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 70542 71381 . + . ID=gene-HMPREF7215_1247;Name=HMPREF7215_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1247 GCA_000177335.1|ADFP01000086.1 Genbank CDS 70542 71381 . + 0 ID=cds-EFB90335.1;Parent=gene-HMPREF7215_1247;Dbxref=NCBI_GP:EFB90335.1;Name=EFB90335.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060%3B match to protein family HMM TIGR01944;gbkey=CDS;locus_tag=HMPREF7215_1247;product=ferredoxin;protein_id=EFB90335.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 71459 71725 . - . ID=gene-HMPREF7215_1248;Name=HMPREF7215_1248;Note=fic;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1248 GCA_000177335.1|ADFP01000086.1 Genbank CDS 71459 71725 . - 0 ID=cds-EFB90336.1;Parent=gene-HMPREF7215_1248;Dbxref=NCBI_GP:EFB90336.1;Name=EFB90336.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1248;product=hypothetical protein;protein_id=EFB90336.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 71727 72005 . - . ID=gene-HMPREF7215_1249;Name=HMPREF7215_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1249 GCA_000177335.1|ADFP01000086.1 Genbank CDS 71727 72005 . - 0 ID=cds-EFB90337.1;Parent=gene-HMPREF7215_1249;Dbxref=NCBI_GP:EFB90337.1;Name=EFB90337.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1249;product=fic family protein;protein_id=EFB90337.1;transl_table=11 GCA_000177335.1|ADFP01000086.1 Genbank gene 72057 72365 . - . ID=gene-HMPREF7215_1250;Name=HMPREF7215_1250;end_range=72365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1250;partial=true GCA_000177335.1|ADFP01000086.1 Genbank CDS 72057 72365 . - 0 ID=cds-EFB90338.1;Parent=gene-HMPREF7215_1250;Dbxref=NCBI_GP:EFB90338.1;Name=EFB90338.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=72365,.;gbkey=CDS;locus_tag=HMPREF7215_1250;partial=true;product=hypothetical protein;protein_id=EFB90338.1;transl_table=11 ##sequence-region ADFP01000085.1 1 1102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000085.1 Genbank region 1 1102 . + . ID=ADFP01000085.1:1..1102;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000085.1 Genbank gene 47 1003 . + . ID=gene-HMPREF7215_1676;Name=HMPREF7215_1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1676 GCA_000177335.1|ADFP01000085.1 Genbank CDS 47 1003 . + 0 ID=cds-EFB90339.1;Parent=gene-HMPREF7215_1676;Dbxref=NCBI_GP:EFB90339.1;Name=EFB90339.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF7215_1676;product=site-specific recombinase%2C phage integrase family;protein_id=EFB90339.1;transl_table=11 ##sequence-region ADFP01000084.1 1 50003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000084.1 Genbank region 1 50003 . + . ID=ADFP01000084.1:1..50003;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000084.1 Genbank gene 118 267 . + . ID=gene-HMPREF7215_2222;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF7215_2222 GCA_000177335.1|ADFP01000084.1 Genbank CDS 118 267 . + 0 ID=cds-EFB90340.1;Parent=gene-HMPREF7215_2222;Dbxref=NCBI_GP:EFB90340.1;Name=EFB90340.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023;gbkey=CDS;gene=rpmG;locus_tag=HMPREF7215_2222;product=ribosomal protein L33;protein_id=EFB90340.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 288 366 . + . ID=gene-HMPREF7215_2223;Name=HMPREF7215_2223;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2223 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 288 366 . + . ID=rna-HMPREF7215_2223;Parent=gene-HMPREF7215_2223;gbkey=tRNA;locus_tag=HMPREF7215_2223;product=tRNA-Trp GCA_000177335.1|ADFP01000084.1 Genbank exon 288 366 . + . ID=exon-HMPREF7215_2223-1;Parent=rna-HMPREF7215_2223;gbkey=tRNA;locus_tag=HMPREF7215_2223;product=tRNA-Trp GCA_000177335.1|ADFP01000084.1 Genbank gene 408 590 . + . ID=gene-HMPREF7215_2224;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2224 GCA_000177335.1|ADFP01000084.1 Genbank CDS 408 590 . + 0 ID=cds-EFB90341.1;Parent=gene-HMPREF7215_2224;Dbxref=NCBI_GP:EFB90341.1;Name=EFB90341.1;Note=identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;locus_tag=HMPREF7215_2224;product=preprotein translocase%2C SecE subunit;protein_id=EFB90341.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 666 1211 . + . ID=gene-HMPREF7215_2225;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HMPREF7215_2225 GCA_000177335.1|ADFP01000084.1 Genbank CDS 666 1211 . + 0 ID=cds-EFB90342.1;Parent=gene-HMPREF7215_2225;Dbxref=NCBI_GP:EFB90342.1;Name=EFB90342.1;Note=identified by match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;locus_tag=HMPREF7215_2225;product=transcription termination/antitermination factor NusG;protein_id=EFB90342.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 1290 1715 . + . ID=gene-HMPREF7215_2226;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=HMPREF7215_2226 GCA_000177335.1|ADFP01000084.1 Genbank CDS 1290 1715 . + 0 ID=cds-EFB90343.1;Parent=gene-HMPREF7215_2226;Dbxref=NCBI_GP:EFB90343.1;Name=EFB90343.1;Note=identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632;gbkey=CDS;gene=rplK;locus_tag=HMPREF7215_2226;product=ribosomal protein L11;protein_id=EFB90343.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 1776 2492 . + . ID=gene-HMPREF7215_2227;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2227 GCA_000177335.1|ADFP01000084.1 Genbank CDS 1776 2492 . + 0 ID=cds-EFB90344.1;Parent=gene-HMPREF7215_2227;Dbxref=NCBI_GP:EFB90344.1;Name=EFB90344.1;Note=identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169;gbkey=CDS;gene=rplA;locus_tag=HMPREF7215_2227;product=ribosomal protein L1;protein_id=EFB90344.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 2731 3261 . + . ID=gene-HMPREF7215_2228;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2228 GCA_000177335.1|ADFP01000084.1 Genbank CDS 2731 3261 . + 0 ID=cds-EFB90345.1;Parent=gene-HMPREF7215_2228;Dbxref=NCBI_GP:EFB90345.1;Name=EFB90345.1;Note=identified by match to protein family HMM PF00466;gbkey=CDS;gene=rplJ;locus_tag=HMPREF7215_2228;product=ribosomal protein L10;protein_id=EFB90345.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 3355 3732 . + . ID=gene-HMPREF7215_2230;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF7215_2230 GCA_000177335.1|ADFP01000084.1 Genbank CDS 3355 3732 . + 0 ID=cds-EFB90346.1;Parent=gene-HMPREF7215_2230;Dbxref=NCBI_GP:EFB90346.1;Name=EFB90346.1;Note=identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855;gbkey=CDS;gene=rplL;locus_tag=HMPREF7215_2230;product=ribosomal protein L7/L12;protein_id=EFB90346.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 3729 3860 . - . ID=gene-HMPREF7215_2229;Name=HMPREF7215_2229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2229 GCA_000177335.1|ADFP01000084.1 Genbank CDS 3729 3860 . - 0 ID=cds-EFB90347.1;Parent=gene-HMPREF7215_2229;Dbxref=NCBI_GP:EFB90347.1;Name=EFB90347.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2229;product=hypothetical protein;protein_id=EFB90347.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 3837 4688 . + . ID=gene-HMPREF7215_2231;Name=HMPREF7215_2231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2231 GCA_000177335.1|ADFP01000084.1 Genbank CDS 3837 4688 . + 0 ID=cds-EFB90348.1;Parent=gene-HMPREF7215_2231;Dbxref=NCBI_GP:EFB90348.1;Name=EFB90348.1;Note=identified by match to protein family HMM PF04909;gbkey=CDS;locus_tag=HMPREF7215_2231;product=amidohydrolase family protein;protein_id=EFB90348.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 4783 4857 . + . ID=gene-HMPREF7215_2232;Name=HMPREF7215_2232;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2232 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 4783 4857 . + . ID=rna-HMPREF7215_2232;Parent=gene-HMPREF7215_2232;gbkey=tRNA;locus_tag=HMPREF7215_2232;product=tRNA-Val GCA_000177335.1|ADFP01000084.1 Genbank exon 4783 4857 . + . ID=exon-HMPREF7215_2232-1;Parent=rna-HMPREF7215_2232;gbkey=tRNA;locus_tag=HMPREF7215_2232;product=tRNA-Val GCA_000177335.1|ADFP01000084.1 Genbank gene 4864 4942 . + . ID=gene-HMPREF7215_2233;Name=HMPREF7215_2233;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2233 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 4864 4942 . + . ID=rna-HMPREF7215_2233;Parent=gene-HMPREF7215_2233;gbkey=tRNA;locus_tag=HMPREF7215_2233;product=tRNA-Asp GCA_000177335.1|ADFP01000084.1 Genbank exon 4864 4942 . + . ID=exon-HMPREF7215_2233-1;Parent=rna-HMPREF7215_2233;gbkey=tRNA;locus_tag=HMPREF7215_2233;product=tRNA-Asp GCA_000177335.1|ADFP01000084.1 Genbank gene 4947 5022 . + . ID=gene-HMPREF7215_2234;Name=HMPREF7215_2234;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2234 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 4947 5022 . + . ID=rna-HMPREF7215_2234;Parent=gene-HMPREF7215_2234;gbkey=tRNA;locus_tag=HMPREF7215_2234;product=tRNA-Phe GCA_000177335.1|ADFP01000084.1 Genbank exon 4947 5022 . + . ID=exon-HMPREF7215_2234-1;Parent=rna-HMPREF7215_2234;gbkey=tRNA;locus_tag=HMPREF7215_2234;product=tRNA-Phe GCA_000177335.1|ADFP01000084.1 Genbank gene 5029 5103 . + . ID=gene-HMPREF7215_2235;Name=HMPREF7215_2235;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2235 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 5029 5103 . + . ID=rna-HMPREF7215_2235;Parent=gene-HMPREF7215_2235;gbkey=tRNA;locus_tag=HMPREF7215_2235;product=tRNA-Gly GCA_000177335.1|ADFP01000084.1 Genbank exon 5029 5103 . + . ID=exon-HMPREF7215_2235-1;Parent=rna-HMPREF7215_2235;gbkey=tRNA;locus_tag=HMPREF7215_2235;product=tRNA-Gly GCA_000177335.1|ADFP01000084.1 Genbank gene 5123 5196 . + . ID=gene-HMPREF7215_2236;Name=HMPREF7215_2236;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2236 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 5123 5196 . + . ID=rna-HMPREF7215_2236;Parent=gene-HMPREF7215_2236;gbkey=tRNA;locus_tag=HMPREF7215_2236;product=tRNA-Cys GCA_000177335.1|ADFP01000084.1 Genbank exon 5123 5196 . + . ID=exon-HMPREF7215_2236-1;Parent=rna-HMPREF7215_2236;gbkey=tRNA;locus_tag=HMPREF7215_2236;product=tRNA-Cys GCA_000177335.1|ADFP01000084.1 Genbank gene 5202 5279 . + . ID=gene-HMPREF7215_2237;Name=HMPREF7215_2237;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2237 GCA_000177335.1|ADFP01000084.1 Genbank tRNA 5202 5279 . + . ID=rna-HMPREF7215_2237;Parent=gene-HMPREF7215_2237;gbkey=tRNA;locus_tag=HMPREF7215_2237;product=tRNA-Asn GCA_000177335.1|ADFP01000084.1 Genbank exon 5202 5279 . + . ID=exon-HMPREF7215_2237-1;Parent=rna-HMPREF7215_2237;gbkey=tRNA;locus_tag=HMPREF7215_2237;product=tRNA-Asn GCA_000177335.1|ADFP01000084.1 Genbank gene 5302 5427 . + . ID=gene-HMPREF7215_2238;Name=HMPREF7215_2238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2238 GCA_000177335.1|ADFP01000084.1 Genbank CDS 5302 5427 . + 0 ID=cds-EFB90349.1;Parent=gene-HMPREF7215_2238;Dbxref=NCBI_GP:EFB90349.1;Name=EFB90349.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2238;product=hypothetical protein;protein_id=EFB90349.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 5487 6323 . + . ID=gene-HMPREF7215_2239;Name=HMPREF7215_2239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2239 GCA_000177335.1|ADFP01000084.1 Genbank CDS 5487 6323 . + 0 ID=cds-EFB90350.1;Parent=gene-HMPREF7215_2239;Dbxref=NCBI_GP:EFB90350.1;Name=EFB90350.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_2239;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB90350.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 6353 7177 . + . ID=gene-HMPREF7215_2240;Name=HMPREF7215_2240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2240 GCA_000177335.1|ADFP01000084.1 Genbank CDS 6353 7177 . + 0 ID=cds-EFB90351.1;Parent=gene-HMPREF7215_2240;Dbxref=NCBI_GP:EFB90351.1;Name=EFB90351.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_2240;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB90351.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 7193 7957 . + . ID=gene-HMPREF7215_2241;Name=HMPREF7215_2241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2241 GCA_000177335.1|ADFP01000084.1 Genbank CDS 7193 7957 . + 0 ID=cds-EFB90352.1;Parent=gene-HMPREF7215_2241;Dbxref=NCBI_GP:EFB90352.1;Name=EFB90352.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_2241;product=ABC transporter%2C permease protein;protein_id=EFB90352.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 7958 8704 . + . ID=gene-HMPREF7215_2242;Name=HMPREF7215_2242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2242 GCA_000177335.1|ADFP01000084.1 Genbank CDS 7958 8704 . + 0 ID=cds-EFB90353.1;Parent=gene-HMPREF7215_2242;Dbxref=NCBI_GP:EFB90353.1;Name=EFB90353.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2242;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90353.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 8714 9724 . + . ID=gene-HMPREF7215_2243;Name=HMPREF7215_2243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2243 GCA_000177335.1|ADFP01000084.1 Genbank CDS 8714 9724 . + 0 ID=cds-EFB90354.1;Parent=gene-HMPREF7215_2243;Dbxref=NCBI_GP:EFB90354.1;Name=EFB90354.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_2243;product=radical SAM domain protein;protein_id=EFB90354.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 9700 9924 . + . ID=gene-HMPREF7215_2244;Name=HMPREF7215_2244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2244 GCA_000177335.1|ADFP01000084.1 Genbank CDS 9700 9924 . + 0 ID=cds-EFB90355.1;Parent=gene-HMPREF7215_2244;Dbxref=NCBI_GP:EFB90355.1;Name=EFB90355.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2244;product=hypothetical protein;protein_id=EFB90355.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 10040 11392 . + . ID=gene-HMPREF7215_2245;Name=HMPREF7215_2245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2245 GCA_000177335.1|ADFP01000084.1 Genbank CDS 10040 11392 . + 0 ID=cds-EFB90356.1;Parent=gene-HMPREF7215_2245;Dbxref=NCBI_GP:EFB90356.1;Name=EFB90356.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;locus_tag=HMPREF7215_2245;product=Sodium:neurotransmitter symporter family protein;protein_id=EFB90356.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 11412 11528 . + . ID=gene-HMPREF7215_2246;Name=HMPREF7215_2246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2246 GCA_000177335.1|ADFP01000084.1 Genbank CDS 11412 11528 . + 0 ID=cds-EFB90357.1;Parent=gene-HMPREF7215_2246;Dbxref=NCBI_GP:EFB90357.1;Name=EFB90357.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2246;product=hypothetical protein;protein_id=EFB90357.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 11587 12582 . - . ID=gene-HMPREF7215_2247;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2247 GCA_000177335.1|ADFP01000084.1 Genbank CDS 11587 12582 . - 0 ID=cds-EFB90358.1;Parent=gene-HMPREF7215_2247;Dbxref=NCBI_GP:EFB90358.1;Name=EFB90358.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124;gbkey=CDS;gene=hypE;locus_tag=HMPREF7215_2247;product=hydrogenase expression/formation protein HypE;protein_id=EFB90358.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 12579 13661 . - . ID=gene-HMPREF7215_2248;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2248 GCA_000177335.1|ADFP01000084.1 Genbank CDS 12579 13661 . - 0 ID=cds-EFB90359.1;Parent=gene-HMPREF7215_2248;Dbxref=NCBI_GP:EFB90359.1;Name=EFB90359.1;Note=identified by match to protein family HMM PF01924%3B match to protein family HMM TIGR00075;gbkey=CDS;gene=hypD;locus_tag=HMPREF7215_2248;product=hydrogenase expression/formation protein HypD;protein_id=EFB90359.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 13639 13884 . - . ID=gene-HMPREF7215_2249;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2249 GCA_000177335.1|ADFP01000084.1 Genbank CDS 13639 13884 . - 0 ID=cds-EFB90360.1;Parent=gene-HMPREF7215_2249;Dbxref=NCBI_GP:EFB90360.1;Name=EFB90360.1;Note=identified by match to protein family HMM PF01455%3B match to protein family HMM TIGR00074;gbkey=CDS;gene=hypC;locus_tag=HMPREF7215_2249;product=putative hydrogenase assembly chaperone HypC/HupF;protein_id=EFB90360.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 13916 14035 . - . ID=gene-HMPREF7215_2250;Name=HMPREF7215_2250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2250 GCA_000177335.1|ADFP01000084.1 Genbank CDS 13916 14035 . - 0 ID=cds-EFB90361.1;Parent=gene-HMPREF7215_2250;Dbxref=NCBI_GP:EFB90361.1;Name=EFB90361.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2250;product=hypothetical protein;protein_id=EFB90361.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 14124 14450 . + . ID=gene-HMPREF7215_2251;Name=HMPREF7215_2251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2251 GCA_000177335.1|ADFP01000084.1 Genbank CDS 14124 14450 . + 0 ID=cds-EFB90362.1;Parent=gene-HMPREF7215_2251;Dbxref=NCBI_GP:EFB90362.1;Name=EFB90362.1;Note=identified by match to protein family HMM PF00085;gbkey=CDS;locus_tag=HMPREF7215_2251;product=thioredoxin;protein_id=EFB90362.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 14709 14954 . - . ID=gene-HMPREF7215_2252;Name=HMPREF7215_2252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2252 GCA_000177335.1|ADFP01000084.1 Genbank CDS 14709 14954 . - 0 ID=cds-EFB90363.1;Parent=gene-HMPREF7215_2252;Dbxref=NCBI_GP:EFB90363.1;Name=EFB90363.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2252;product=hypothetical protein;protein_id=EFB90363.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank binding_site 14799 14913 . + . ID=id-ADFP01000084.1:14799..14913;Note=Glycine riboswitch%3B Rfam score 45.16;bound_moiety=glycine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00504 GCA_000177335.1|ADFP01000084.1 Genbank gene 14977 15366 . + . ID=gene-HMPREF7215_2254;Name=HMPREF7215_2254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2254 GCA_000177335.1|ADFP01000084.1 Genbank CDS 14977 15366 . + 0 ID=cds-EFB90364.1;Parent=gene-HMPREF7215_2254;Dbxref=NCBI_GP:EFB90364.1;Name=EFB90364.1;gbkey=CDS;locus_tag=HMPREF7215_2254;product=hypothetical protein;protein_id=EFB90364.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 15371 15541 . - . ID=gene-HMPREF7215_2255;Name=HMPREF7215_2255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2255 GCA_000177335.1|ADFP01000084.1 Genbank CDS 15371 15541 . - 0 ID=cds-EFB90365.1;Parent=gene-HMPREF7215_2255;Dbxref=NCBI_GP:EFB90365.1;Name=EFB90365.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2255;product=hypothetical protein;protein_id=EFB90365.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 15524 16816 . + . ID=gene-HMPREF7215_2256;Name=HMPREF7215_2256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2256 GCA_000177335.1|ADFP01000084.1 Genbank CDS 15524 16816 . + 0 ID=cds-EFB90366.1;Parent=gene-HMPREF7215_2256;Dbxref=NCBI_GP:EFB90366.1;Name=EFB90366.1;Note=identified by match to protein family HMM PF09338;gbkey=CDS;locus_tag=HMPREF7215_2256;product=glycine/sarcosine/betaine reductase component B subunit alpha and beta;protein_id=EFB90366.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 16876 17919 . + . ID=gene-HMPREF7215_2257;Name=HMPREF7215_2257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2257 GCA_000177335.1|ADFP01000084.1 Genbank CDS 16876 17919 . + 0 ID=cds-EFB90367.1;Parent=gene-HMPREF7215_2257;Dbxref=NCBI_GP:EFB90367.1;Name=EFB90367.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF07355%3B match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_2257;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family;protein_id=EFB90367.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 17947 18186 . + . ID=gene-HMPREF7215_2258;Name=HMPREF7215_2258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2258 GCA_000177335.1|ADFP01000084.1 Genbank CDS 17947 18186 . + 0 ID=cds-EFB90368.1;Parent=gene-HMPREF7215_2258;Dbxref=NCBI_GP:EFB90368.1;Name=EFB90368.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_2258;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase domain protein;protein_id=EFB90368.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 18328 19389 . + . ID=gene-HMPREF7215_2259;Name=HMPREF7215_2259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2259 GCA_000177335.1|ADFP01000084.1 Genbank CDS 18328 19389 . + 0 ID=cds-EFB90369.1;Parent=gene-HMPREF7215_2259;Dbxref=NCBI_GP:EFB90369.1;Name=EFB90369.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;locus_tag=HMPREF7215_2259;product=hypothetical protein;protein_id=EFB90369.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 19555 20124 . + . ID=gene-HMPREF7215_2260;Name=HMPREF7215_2260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2260 GCA_000177335.1|ADFP01000084.1 Genbank CDS 19555 20124 . + 0 ID=cds-EFB90370.1;Parent=gene-HMPREF7215_2260;Dbxref=NCBI_GP:EFB90370.1;Name=EFB90370.1;Note=identified by match to protein family HMM PF09021;gbkey=CDS;locus_tag=HMPREF7215_2260;product=HutP;protein_id=EFB90370.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 20248 20481 . + . ID=gene-HMPREF7215_2261;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2261 GCA_000177335.1|ADFP01000084.1 Genbank CDS 20248 20481 . + 0 ID=cds-EFB90371.1;Parent=gene-HMPREF7215_2261;Dbxref=NCBI_GP:EFB90371.1;Name=EFB90371.1;Note=identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105;gbkey=CDS;gene=rpmE;locus_tag=HMPREF7215_2261;product=ribosomal protein L31;protein_id=EFB90371.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 20611 21255 . + . ID=gene-HMPREF7215_2262;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=HMPREF7215_2262 GCA_000177335.1|ADFP01000084.1 Genbank CDS 20611 21255 . + 0 ID=cds-EFB90372.1;Parent=gene-HMPREF7215_2262;Dbxref=NCBI_GP:EFB90372.1;Name=EFB90372.1;Note=identified by match to protein family HMM PF02511%3B match to protein family HMM TIGR02170;gbkey=CDS;gene=thyX;locus_tag=HMPREF7215_2262;product=thymidylate synthase%2C flavin-dependent;protein_id=EFB90372.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 21252 22220 . + . ID=gene-HMPREF7215_2263;Name=HMPREF7215_2263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2263 GCA_000177335.1|ADFP01000084.1 Genbank CDS 21252 22220 . + 0 ID=cds-EFB90373.1;Parent=gene-HMPREF7215_2263;Dbxref=NCBI_GP:EFB90373.1;Name=EFB90373.1;Note=identified by match to protein family HMM PF07136;gbkey=CDS;locus_tag=HMPREF7215_2263;product=hypothetical protein;protein_id=EFB90373.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 22217 23293 . + . ID=gene-HMPREF7215_2264;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2264 GCA_000177335.1|ADFP01000084.1 Genbank CDS 22217 23293 . + 0 ID=cds-EFB90374.1;Parent=gene-HMPREF7215_2264;Dbxref=NCBI_GP:EFB90374.1;Name=EFB90374.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019;gbkey=CDS;gene=prfA;locus_tag=HMPREF7215_2264;product=peptide chain release factor 1;protein_id=EFB90374.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 23283 24143 . + . ID=gene-HMPREF7215_2265;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2265 GCA_000177335.1|ADFP01000084.1 Genbank CDS 23283 24143 . + 0 ID=cds-EFB90375.1;Parent=gene-HMPREF7215_2265;Dbxref=NCBI_GP:EFB90375.1;Name=EFB90375.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534;gbkey=CDS;gene=prmC;locus_tag=HMPREF7215_2265;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=EFB90375.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 24238 25161 . + . ID=gene-HMPREF7215_2266;Name=HMPREF7215_2266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2266 GCA_000177335.1|ADFP01000084.1 Genbank CDS 24238 25161 . + 0 ID=cds-EFB90376.1;Parent=gene-HMPREF7215_2266;Dbxref=NCBI_GP:EFB90376.1;Name=EFB90376.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_2266;product=putative thioredoxin-disulfide reductase;protein_id=EFB90376.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 25344 25457 . + . ID=gene-HMPREF7215_2267;Name=HMPREF7215_2267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2267 GCA_000177335.1|ADFP01000084.1 Genbank CDS 25344 25457 . + 0 ID=cds-EFB90377.1;Parent=gene-HMPREF7215_2267;Dbxref=NCBI_GP:EFB90377.1;Name=EFB90377.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2267;product=hypothetical protein;protein_id=EFB90377.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 25854 27320 . - . ID=gene-HMPREF7215_2268;Name=HMPREF7215_2268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2268 GCA_000177335.1|ADFP01000084.1 Genbank CDS 25854 27320 . - 0 ID=cds-EFB90378.1;Parent=gene-HMPREF7215_2268;Dbxref=NCBI_GP:EFB90378.1;Name=EFB90378.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF7215_2268;product=Na+/H+ antiporter family protein;protein_id=EFB90378.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 27476 28468 . - . ID=gene-HMPREF7215_2269;Name=HMPREF7215_2269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2269 GCA_000177335.1|ADFP01000084.1 Genbank CDS 27476 28468 . - 0 ID=cds-EFB90379.1;Parent=gene-HMPREF7215_2269;Dbxref=NCBI_GP:EFB90379.1;Name=EFB90379.1;gbkey=CDS;locus_tag=HMPREF7215_2269;product=D-cysteine desulfhydrase;protein_id=EFB90379.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 28476 28994 . - . ID=gene-HMPREF7215_2270;Name=HMPREF7215_2270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2270 GCA_000177335.1|ADFP01000084.1 Genbank CDS 28476 28994 . - 0 ID=cds-EFB90380.1;Parent=gene-HMPREF7215_2270;Dbxref=NCBI_GP:EFB90380.1;Name=EFB90380.1;Note=identified by match to protein family HMM PF01042;gbkey=CDS;locus_tag=HMPREF7215_2270;product=putative endoribonuclease L-PSP;protein_id=EFB90380.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 29108 29779 . - . ID=gene-HMPREF7215_2271;Name=HMPREF7215_2271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2271 GCA_000177335.1|ADFP01000084.1 Genbank CDS 29108 29779 . - 0 ID=cds-EFB90381.1;Parent=gene-HMPREF7215_2271;Dbxref=NCBI_GP:EFB90381.1;Name=EFB90381.1;Note=identified by match to protein family HMM PF08348;gbkey=CDS;locus_tag=HMPREF7215_2271;product=YheO-like protein;protein_id=EFB90381.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 29862 29996 . - . ID=gene-HMPREF7215_2272;Name=HMPREF7215_2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2272 GCA_000177335.1|ADFP01000084.1 Genbank CDS 29862 29996 . - 0 ID=cds-EFB90382.1;Parent=gene-HMPREF7215_2272;Dbxref=NCBI_GP:EFB90382.1;Name=EFB90382.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2272;product=hypothetical protein;protein_id=EFB90382.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 30032 30298 . + . ID=gene-HMPREF7215_2273;Name=HMPREF7215_2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2273 GCA_000177335.1|ADFP01000084.1 Genbank CDS 30032 30298 . + 0 ID=cds-EFB90383.1;Parent=gene-HMPREF7215_2273;Dbxref=NCBI_GP:EFB90383.1;Name=EFB90383.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2273;product=hypothetical protein;protein_id=EFB90383.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 30619 31659 . + . ID=gene-HMPREF7215_2274;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2274 GCA_000177335.1|ADFP01000084.1 Genbank CDS 30619 31659 . + 0 ID=cds-EFB90384.1;Parent=gene-HMPREF7215_2274;Dbxref=NCBI_GP:EFB90384.1;Name=EFB90384.1;Note=identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331;gbkey=CDS;gene=hrcA;locus_tag=HMPREF7215_2274;product=heat-inducible transcription repressor HrcA;protein_id=EFB90384.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 31661 32248 . + . ID=gene-HMPREF7215_2275;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2275 GCA_000177335.1|ADFP01000084.1 Genbank CDS 31661 32248 . + 0 ID=cds-EFB90385.1;Parent=gene-HMPREF7215_2275;Dbxref=NCBI_GP:EFB90385.1;Name=EFB90385.1;Note=identified by match to protein family HMM PF01025;gbkey=CDS;gene=grpE;locus_tag=HMPREF7215_2275;product=co-chaperone GrpE;protein_id=EFB90385.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 32320 34155 . + . ID=gene-HMPREF7215_2276;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF7215_2276 GCA_000177335.1|ADFP01000084.1 Genbank CDS 32320 34155 . + 0 ID=cds-EFB90386.1;Parent=gene-HMPREF7215_2276;Dbxref=NCBI_GP:EFB90386.1;Name=EFB90386.1;Note=identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350;gbkey=CDS;gene=dnaK;locus_tag=HMPREF7215_2276;product=chaperone protein DnaK;protein_id=EFB90386.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 34169 35326 . + . ID=gene-HMPREF7215_2277;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2277 GCA_000177335.1|ADFP01000084.1 Genbank CDS 34169 35326 . + 0 ID=cds-EFB90387.1;Parent=gene-HMPREF7215_2277;Dbxref=NCBI_GP:EFB90387.1;Name=EFB90387.1;Note=identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349;gbkey=CDS;gene=dnaJ;locus_tag=HMPREF7215_2277;product=chaperone protein DnaJ;protein_id=EFB90387.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 35480 36349 . + . ID=gene-HMPREF7215_2278;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2278 GCA_000177335.1|ADFP01000084.1 Genbank CDS 35480 36349 . + 0 ID=cds-EFB90388.1;Parent=gene-HMPREF7215_2278;Dbxref=NCBI_GP:EFB90388.1;Name=EFB90388.1;Note=identified by match to protein family HMM PF06325;gbkey=CDS;gene=prmA;locus_tag=HMPREF7215_2278;product=ribosomal protein L11 methyltransferase;protein_id=EFB90388.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 36330 37640 . + . ID=gene-HMPREF7215_2279;Name=yqeV;gbkey=Gene;gene=yqeV;gene_biotype=protein_coding;locus_tag=HMPREF7215_2279 GCA_000177335.1|ADFP01000084.1 Genbank CDS 36330 37640 . + 0 ID=cds-EFB90389.1;Parent=gene-HMPREF7215_2279;Dbxref=NCBI_GP:EFB90389.1;Name=EFB90389.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579;gbkey=CDS;gene=yqeV;locus_tag=HMPREF7215_2279;product=tRNA methylthiotransferase YqeV;protein_id=EFB90389.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 37726 38061 . + . ID=gene-HMPREF7215_2280;Name=HMPREF7215_2280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2280 GCA_000177335.1|ADFP01000084.1 Genbank CDS 37726 38061 . + 0 ID=cds-EFB90390.1;Parent=gene-HMPREF7215_2280;Dbxref=NCBI_GP:EFB90390.1;Name=EFB90390.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=HMPREF7215_2280;product=histidine triad domain protein;protein_id=EFB90390.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 38100 38279 . + . ID=gene-HMPREF7215_2281;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=HMPREF7215_2281 GCA_000177335.1|ADFP01000084.1 Genbank CDS 38100 38279 . + 0 ID=cds-EFB90391.1;Parent=gene-HMPREF7215_2281;Dbxref=NCBI_GP:EFB90391.1;Name=EFB90391.1;Note=identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030;gbkey=CDS;gene=rpsU;locus_tag=HMPREF7215_2281;product=ribosomal protein S21;protein_id=EFB90391.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 38286 38741 . + . ID=gene-HMPREF7215_2282;Name=HMPREF7215_2282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2282 GCA_000177335.1|ADFP01000084.1 Genbank CDS 38286 38741 . + 0 ID=cds-EFB90392.1;Parent=gene-HMPREF7215_2282;Dbxref=NCBI_GP:EFB90392.1;Name=EFB90392.1;Note=identified by match to protein family HMM PF09424;gbkey=CDS;locus_tag=HMPREF7215_2282;product=YqeY-like protein;protein_id=EFB90392.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 38816 39358 . + . ID=gene-HMPREF7215_2283;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=HMPREF7215_2283 GCA_000177335.1|ADFP01000084.1 Genbank CDS 38816 39358 . + 0 ID=cds-EFB90393.1;Parent=gene-HMPREF7215_2283;Dbxref=NCBI_GP:EFB90393.1;Name=EFB90393.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;gene=nrdR;locus_tag=HMPREF7215_2283;product=transcriptional regulator NrdR;protein_id=EFB90393.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 39474 40046 . + . ID=gene-HMPREF7215_2284;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2284 GCA_000177335.1|ADFP01000084.1 Genbank CDS 39474 40046 . + 0 ID=cds-EFB90394.1;Parent=gene-HMPREF7215_2284;Dbxref=NCBI_GP:EFB90394.1;Name=EFB90394.1;Note=identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560;gbkey=CDS;gene=pgsA;locus_tag=HMPREF7215_2284;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=EFB90394.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 40140 42929 . + . ID=gene-HMPREF7215_2285;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2285 GCA_000177335.1|ADFP01000084.1 Genbank CDS 40140 42929 . + 0 ID=cds-EFB90395.1;Parent=gene-HMPREF7215_2285;Dbxref=NCBI_GP:EFB90395.1;Name=EFB90395.1;Note=identified by match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;locus_tag=HMPREF7215_2285;product=preprotein translocase%2C SecA subunit;protein_id=EFB90395.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 42939 44756 . + . ID=gene-HMPREF7215_2286;Name=HMPREF7215_2286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2286 GCA_000177335.1|ADFP01000084.1 Genbank CDS 42939 44756 . + 0 ID=cds-EFB90396.1;Parent=gene-HMPREF7215_2286;Dbxref=NCBI_GP:EFB90396.1;Name=EFB90396.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2286;product=hypothetical protein;protein_id=EFB90396.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 44792 46471 . + . ID=gene-HMPREF7215_2287;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2287 GCA_000177335.1|ADFP01000084.1 Genbank CDS 44792 46471 . + 0 ID=cds-EFB90397.1;Parent=gene-HMPREF7215_2287;Dbxref=NCBI_GP:EFB90397.1;Name=EFB90397.1;Note=identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;locus_tag=HMPREF7215_2287;product=arginine--tRNA ligase;protein_id=EFB90397.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 46474 46782 . + . ID=gene-HMPREF7215_2288;Name=HMPREF7215_2288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2288 GCA_000177335.1|ADFP01000084.1 Genbank CDS 46474 46782 . + 0 ID=cds-EFB90398.1;Parent=gene-HMPREF7215_2288;Dbxref=NCBI_GP:EFB90398.1;Name=EFB90398.1;gbkey=CDS;locus_tag=HMPREF7215_2288;product=hypothetical protein;protein_id=EFB90398.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 47073 48476 . + . ID=gene-HMPREF7215_2289;Name=HMPREF7215_2289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2289 GCA_000177335.1|ADFP01000084.1 Genbank CDS 47073 48476 . + 0 ID=cds-EFB90399.1;Parent=gene-HMPREF7215_2289;Dbxref=NCBI_GP:EFB90399.1;Name=EFB90399.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_2289;product=amidohydrolase;protein_id=EFB90399.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 48510 49394 . + . ID=gene-HMPREF7215_2290;Name=HMPREF7215_2290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2290 GCA_000177335.1|ADFP01000084.1 Genbank CDS 48510 49394 . + 0 ID=cds-EFB90400.1;Parent=gene-HMPREF7215_2290;Dbxref=NCBI_GP:EFB90400.1;Name=EFB90400.1;gbkey=CDS;locus_tag=HMPREF7215_2290;product=hypothetical protein;protein_id=EFB90400.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 49408 49899 . + . ID=gene-HMPREF7215_2291;Name=HMPREF7215_2291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2291 GCA_000177335.1|ADFP01000084.1 Genbank CDS 49408 49899 . + 0 ID=cds-EFB90401.1;Parent=gene-HMPREF7215_2291;Dbxref=NCBI_GP:EFB90401.1;Name=EFB90401.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2291;product=hypothetical protein;protein_id=EFB90401.1;transl_table=11 GCA_000177335.1|ADFP01000084.1 Genbank gene 49881 50003 . + . ID=gene-HMPREF7215_2292;Name=HMPREF7215_2292;end_range=50003,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2292;partial=true GCA_000177335.1|ADFP01000084.1 Genbank CDS 49881 50003 . + 0 ID=cds-EFB90402.1;Parent=gene-HMPREF7215_2292;Dbxref=NCBI_GP:EFB90402.1;Name=EFB90402.1;Note=identified by glimmer%3B putative;end_range=50003,.;gbkey=CDS;locus_tag=HMPREF7215_2292;partial=true;product=hypothetical protein;protein_id=EFB90402.1;transl_table=11 ##sequence-region ADFP01000083.1 1 8307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000083.1 Genbank region 1 8307 . + . ID=ADFP01000083.1:1..8307;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000083.1 Genbank gene 93 1241 . - . ID=gene-HMPREF7215_0236;Name=HMPREF7215_0236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0236 GCA_000177335.1|ADFP01000083.1 Genbank CDS 93 1241 . - 0 ID=cds-EFB90403.1;Parent=gene-HMPREF7215_0236;Dbxref=NCBI_GP:EFB90403.1;Name=EFB90403.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00248;gbkey=CDS;locus_tag=HMPREF7215_0236;product=oxidoreductase%2C aldo/keto reductase family protein;protein_id=EFB90403.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 1439 2245 . - . ID=gene-HMPREF7215_0237;Name=HMPREF7215_0237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0237 GCA_000177335.1|ADFP01000083.1 Genbank CDS 1439 2245 . - 0 ID=cds-EFB90404.1;Parent=gene-HMPREF7215_0237;Dbxref=NCBI_GP:EFB90404.1;Name=EFB90404.1;Note=identified by match to protein family HMM PF01958%3B match to protein family HMM PF03447;gbkey=CDS;locus_tag=HMPREF7215_0237;product=homoserine dehydrogenase%2C NAD binding domain protein;protein_id=EFB90404.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 2319 2957 . - . ID=gene-HMPREF7215_0238;Name=HMPREF7215_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0238 GCA_000177335.1|ADFP01000083.1 Genbank CDS 2319 2957 . - 0 ID=cds-EFB90405.1;Parent=gene-HMPREF7215_0238;Dbxref=NCBI_GP:EFB90405.1;Name=EFB90405.1;Note=identified by match to protein family HMM PF08348;gbkey=CDS;locus_tag=HMPREF7215_0238;product=YheO-like protein;protein_id=EFB90405.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 3047 4363 . - . ID=gene-HMPREF7215_0239;Name=HMPREF7215_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0239 GCA_000177335.1|ADFP01000083.1 Genbank CDS 3047 4363 . - 0 ID=cds-EFB90406.1;Parent=gene-HMPREF7215_0239;Dbxref=NCBI_GP:EFB90406.1;Name=EFB90406.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_0239;product=amidohydrolase;protein_id=EFB90406.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 4368 4832 . - . ID=gene-HMPREF7215_0240;Name=HMPREF7215_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0240 GCA_000177335.1|ADFP01000083.1 Genbank CDS 4368 4832 . - 0 ID=cds-EFB90407.1;Parent=gene-HMPREF7215_0240;Dbxref=NCBI_GP:EFB90407.1;Name=EFB90407.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_0240;product=hypothetical protein;protein_id=EFB90407.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 4851 5690 . - . ID=gene-HMPREF7215_0241;Name=HMPREF7215_0241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0241 GCA_000177335.1|ADFP01000083.1 Genbank CDS 4851 5690 . - 0 ID=cds-EFB90408.1;Parent=gene-HMPREF7215_0241;Dbxref=NCBI_GP:EFB90408.1;Name=EFB90408.1;gbkey=CDS;locus_tag=HMPREF7215_0241;product=hypothetical protein;protein_id=EFB90408.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 5727 6578 . - . ID=gene-HMPREF7215_0242;Name=HMPREF7215_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0242 GCA_000177335.1|ADFP01000083.1 Genbank CDS 5727 6578 . - 0 ID=cds-EFB90409.1;Parent=gene-HMPREF7215_0242;Dbxref=NCBI_GP:EFB90409.1;Name=EFB90409.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=HMPREF7215_0242;product=hydrolase%2C carbon-nitrogen family;protein_id=EFB90409.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 6562 7671 . - . ID=gene-HMPREF7215_0243;Name=HMPREF7215_0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0243 GCA_000177335.1|ADFP01000083.1 Genbank CDS 6562 7671 . - 0 ID=cds-EFB90410.1;Parent=gene-HMPREF7215_0243;Dbxref=NCBI_GP:EFB90410.1;Name=EFB90410.1;Note=identified by match to protein family HMM PF01168;gbkey=CDS;locus_tag=HMPREF7215_0243;product=alanine racemase domain protein;protein_id=EFB90410.1;transl_table=11 GCA_000177335.1|ADFP01000083.1 Genbank gene 8183 8307 . - . ID=gene-HMPREF7215_0244;Name=HMPREF7215_0244;end_range=8307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0244;partial=true GCA_000177335.1|ADFP01000083.1 Genbank CDS 8183 8307 . - 2 ID=cds-EFB90411.1;Parent=gene-HMPREF7215_0244;Dbxref=NCBI_GP:EFB90411.1;Name=EFB90411.1;Note=identified by glimmer%3B putative;end_range=8307,.;gbkey=CDS;locus_tag=HMPREF7215_0244;partial=true;product=hypothetical protein;protein_id=EFB90411.1;transl_table=11 ##sequence-region ADFP01000082.1 1 28783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000082.1 Genbank region 1 28783 . + . ID=ADFP01000082.1:1..28783;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000082.1 Genbank gene 1 416 . + . ID=gene-HMPREF7215_1924;Name=HMPREF7215_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1924;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000082.1 Genbank CDS 1 416 . + 2 ID=cds-EFB90412.1;Parent=gene-HMPREF7215_1924;Dbxref=NCBI_GP:EFB90412.1;Name=EFB90412.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1924;partial=true;product=hypothetical protein;protein_id=EFB90412.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 514 1323 . + . ID=gene-HMPREF7215_1925;Name=HMPREF7215_1925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1925 GCA_000177335.1|ADFP01000082.1 Genbank CDS 514 1323 . + 0 ID=cds-EFB90413.1;Parent=gene-HMPREF7215_1925;Dbxref=NCBI_GP:EFB90413.1;Name=EFB90413.1;gbkey=CDS;locus_tag=HMPREF7215_1925;product=hypothetical protein;protein_id=EFB90413.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 1404 1889 . + . ID=gene-HMPREF7215_1926;Name=HMPREF7215_1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1926 GCA_000177335.1|ADFP01000082.1 Genbank CDS 1404 1889 . + 0 ID=cds-EFB90414.1;Parent=gene-HMPREF7215_1926;Dbxref=NCBI_GP:EFB90414.1;Name=EFB90414.1;Note=identified by match to protein family HMM PF05981;gbkey=CDS;locus_tag=HMPREF7215_1926;product=protein CreA;protein_id=EFB90414.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 1986 2291 . + . ID=gene-HMPREF7215_1927;Name=HMPREF7215_1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1927 GCA_000177335.1|ADFP01000082.1 Genbank CDS 1986 2291 . + 0 ID=cds-EFB90415.1;Parent=gene-HMPREF7215_1927;Dbxref=NCBI_GP:EFB90415.1;Name=EFB90415.1;Note=identified by match to protein family HMM PF02583;gbkey=CDS;locus_tag=HMPREF7215_1927;product=hypothetical protein;protein_id=EFB90415.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 2326 4869 . + . ID=gene-HMPREF7215_1928;Name=HMPREF7215_1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1928 GCA_000177335.1|ADFP01000082.1 Genbank CDS 2326 4869 . + 0 ID=cds-EFB90416.1;Parent=gene-HMPREF7215_1928;Dbxref=NCBI_GP:EFB90416.1;Name=EFB90416.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR00003%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF7215_1928;product=copper-exporting ATPase;protein_id=EFB90416.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 5330 5491 . - . ID=gene-HMPREF7215_1929;Name=HMPREF7215_1929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1929 GCA_000177335.1|ADFP01000082.1 Genbank CDS 5330 5491 . - 0 ID=cds-EFB90417.1;Parent=gene-HMPREF7215_1929;Dbxref=NCBI_GP:EFB90417.1;Name=EFB90417.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1929;product=hypothetical protein;protein_id=EFB90417.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 5579 6667 . + . ID=gene-HMPREF7215_1930;Name=HMPREF7215_1930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1930 GCA_000177335.1|ADFP01000082.1 Genbank CDS 5579 6667 . + 0 ID=cds-EFB90418.1;Parent=gene-HMPREF7215_1930;Dbxref=NCBI_GP:EFB90418.1;Name=EFB90418.1;Note=identified by match to protein family HMM PF01210%3B match to protein family HMM PF02317;gbkey=CDS;locus_tag=HMPREF7215_1930;product=putative opine dehydrogenase;protein_id=EFB90418.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 6880 7422 . + . ID=gene-HMPREF7215_1931;Name=HMPREF7215_1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1931 GCA_000177335.1|ADFP01000082.1 Genbank CDS 6880 7422 . + 0 ID=cds-EFB90419.1;Parent=gene-HMPREF7215_1931;Dbxref=NCBI_GP:EFB90419.1;Name=EFB90419.1;Note=identified by match to protein family HMM PF04290;gbkey=CDS;locus_tag=HMPREF7215_1931;product=TRAP transporter%2C DctQ-like membrane protein;protein_id=EFB90419.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 7423 8727 . + . ID=gene-HMPREF7215_1932;Name=HMPREF7215_1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1932 GCA_000177335.1|ADFP01000082.1 Genbank CDS 7423 8727 . + 0 ID=cds-EFB90420.1;Parent=gene-HMPREF7215_1932;Dbxref=NCBI_GP:EFB90420.1;Name=EFB90420.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_1932;product=TRAP transporter%2C DctM subunit;protein_id=EFB90420.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 8855 9841 . + . ID=gene-HMPREF7215_1933;Name=HMPREF7215_1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1933 GCA_000177335.1|ADFP01000082.1 Genbank CDS 8855 9841 . + 0 ID=cds-EFB90421.1;Parent=gene-HMPREF7215_1933;Dbxref=NCBI_GP:EFB90421.1;Name=EFB90421.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;locus_tag=HMPREF7215_1933;product=bacterial extracellular solute-binding protein%2C family 7;protein_id=EFB90421.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 9950 10636 . - . ID=gene-HMPREF7215_1934;Name=HMPREF7215_1934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1934 GCA_000177335.1|ADFP01000082.1 Genbank CDS 9950 10636 . - 0 ID=cds-EFB90422.1;Parent=gene-HMPREF7215_1934;Dbxref=NCBI_GP:EFB90422.1;Name=EFB90422.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1934;product=FCD domain protein;protein_id=EFB90422.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 10874 12232 . + . ID=gene-HMPREF7215_1935;Name=HMPREF7215_1935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1935 GCA_000177335.1|ADFP01000082.1 Genbank CDS 10874 12232 . + 0 ID=cds-EFB90423.1;Parent=gene-HMPREF7215_1935;Dbxref=NCBI_GP:EFB90423.1;Name=EFB90423.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;locus_tag=HMPREF7215_1935;product=hypothetical protein;protein_id=EFB90423.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 12371 13378 . + . ID=gene-HMPREF7215_1936;Name=HMPREF7215_1936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1936 GCA_000177335.1|ADFP01000082.1 Genbank CDS 12371 13378 . + 0 ID=cds-EFB90424.1;Parent=gene-HMPREF7215_1936;Dbxref=NCBI_GP:EFB90424.1;Name=EFB90424.1;Note=identified by match to protein family HMM PF02423;gbkey=CDS;locus_tag=HMPREF7215_1936;product=putative ectoine utilization protein EutC;protein_id=EFB90424.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 13523 14527 . + . ID=gene-HMPREF7215_1937;Name=HMPREF7215_1937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1937 GCA_000177335.1|ADFP01000082.1 Genbank CDS 13523 14527 . + 0 ID=cds-EFB90425.1;Parent=gene-HMPREF7215_1937;Dbxref=NCBI_GP:EFB90425.1;Name=EFB90425.1;Note=identified by match to protein family HMM PF02423;gbkey=CDS;locus_tag=HMPREF7215_1937;product=alanine dehydrogenase;protein_id=EFB90425.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 14654 16258 . + . ID=gene-HMPREF7215_1938;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1938 GCA_000177335.1|ADFP01000082.1 Genbank CDS 14654 16258 . + 0 ID=cds-EFB90426.1;Parent=gene-HMPREF7215_1938;Dbxref=NCBI_GP:EFB90426.1;Name=EFB90426.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00718;gbkey=CDS;gene=sdaAA;locus_tag=HMPREF7215_1938;product=L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit;protein_id=EFB90426.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 16366 17970 . + . ID=gene-HMPREF7215_1939;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1939 GCA_000177335.1|ADFP01000082.1 Genbank CDS 16366 17970 . + 0 ID=cds-EFB90427.1;Parent=gene-HMPREF7215_1939;Dbxref=NCBI_GP:EFB90427.1;Name=EFB90427.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00718;gbkey=CDS;gene=sdaAA;locus_tag=HMPREF7215_1939;product=L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit;protein_id=EFB90427.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 18593 18724 . + . ID=gene-HMPREF7215_1940;Name=HMPREF7215_1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1940 GCA_000177335.1|ADFP01000082.1 Genbank CDS 18593 18724 . + 0 ID=cds-EFB90428.1;Parent=gene-HMPREF7215_1940;Dbxref=NCBI_GP:EFB90428.1;Name=EFB90428.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1940;product=hypothetical protein;protein_id=EFB90428.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 19021 19875 . - . ID=gene-HMPREF7215_1941;Name=HMPREF7215_1941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1941 GCA_000177335.1|ADFP01000082.1 Genbank CDS 19021 19875 . - 0 ID=cds-EFB90429.1;Parent=gene-HMPREF7215_1941;Dbxref=NCBI_GP:EFB90429.1;Name=EFB90429.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;locus_tag=HMPREF7215_1941;product=SIS domain protein;protein_id=EFB90429.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 19895 20167 . + . ID=gene-HMPREF7215_1942;Name=HMPREF7215_1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1942 GCA_000177335.1|ADFP01000082.1 Genbank CDS 19895 20167 . + 0 ID=cds-EFB90430.1;Parent=gene-HMPREF7215_1942;Dbxref=NCBI_GP:EFB90430.1;Name=EFB90430.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1942;product=hypothetical protein;protein_id=EFB90430.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 20127 21155 . + . ID=gene-HMPREF7215_1943;Name=HMPREF7215_1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1943 GCA_000177335.1|ADFP01000082.1 Genbank CDS 20127 21155 . + 0 ID=cds-EFB90431.1;Parent=gene-HMPREF7215_1943;Dbxref=NCBI_GP:EFB90431.1;Name=EFB90431.1;Note=identified by match to protein family HMM PF02423;gbkey=CDS;locus_tag=HMPREF7215_1943;product=ornithine cyclodeaminase/mu-crystallin family protein;protein_id=EFB90431.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 21400 22782 . + . ID=gene-HMPREF7215_1944;Name=HMPREF7215_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1944 GCA_000177335.1|ADFP01000082.1 Genbank CDS 21400 22782 . + 0 ID=cds-EFB90432.1;Parent=gene-HMPREF7215_1944;Dbxref=NCBI_GP:EFB90432.1;Name=EFB90432.1;Note=identified by match to protein family HMM PF03616;gbkey=CDS;locus_tag=HMPREF7215_1944;product=putative sodium/glutamate symporter;protein_id=EFB90432.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 22811 23902 . + . ID=gene-HMPREF7215_1945;Name=HMPREF7215_1945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1945 GCA_000177335.1|ADFP01000082.1 Genbank CDS 22811 23902 . + 0 ID=cds-EFB90433.1;Parent=gene-HMPREF7215_1945;Dbxref=NCBI_GP:EFB90433.1;Name=EFB90433.1;Note=identified by match to protein family HMM PF00899%3B match to protein family HMM PF01210%3B match to protein family HMM PF02317;gbkey=CDS;locus_tag=HMPREF7215_1945;product=NAD/NADP octopine/nopaline dehydrogenase%2C alpha-helical domain protein;protein_id=EFB90433.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 24528 24668 . + . ID=gene-HMPREF7215_1946;Name=HMPREF7215_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1946 GCA_000177335.1|ADFP01000082.1 Genbank CDS 24528 24668 . + 0 ID=cds-EFB90434.1;Parent=gene-HMPREF7215_1946;Dbxref=NCBI_GP:EFB90434.1;Name=EFB90434.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1946;product=hypothetical protein;protein_id=EFB90434.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 25162 25275 . + . ID=gene-HMPREF7215_1947;Name=HMPREF7215_1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1947 GCA_000177335.1|ADFP01000082.1 Genbank CDS 25162 25275 . + 0 ID=cds-EFB90435.1;Parent=gene-HMPREF7215_1947;Dbxref=NCBI_GP:EFB90435.1;Name=EFB90435.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1947;product=hypothetical protein;protein_id=EFB90435.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 25851 26168 . + . ID=gene-HMPREF7215_1948;Name=HMPREF7215_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1948 GCA_000177335.1|ADFP01000082.1 Genbank CDS 25851 26168 . + 0 ID=cds-EFB90436.1;Parent=gene-HMPREF7215_1948;Dbxref=NCBI_GP:EFB90436.1;Name=EFB90436.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1948;product=hypothetical protein;protein_id=EFB90436.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 26914 27057 . + . ID=gene-HMPREF7215_1949;Name=HMPREF7215_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1949 GCA_000177335.1|ADFP01000082.1 Genbank CDS 26914 27057 . + 0 ID=cds-EFB90437.1;Parent=gene-HMPREF7215_1949;Dbxref=NCBI_GP:EFB90437.1;Name=EFB90437.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1949;product=hypothetical protein;protein_id=EFB90437.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 27168 28052 . - . ID=gene-HMPREF7215_1950;Name=HMPREF7215_1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1950 GCA_000177335.1|ADFP01000082.1 Genbank CDS 27168 28052 . - 0 ID=cds-EFB90438.1;Parent=gene-HMPREF7215_1950;Dbxref=NCBI_GP:EFB90438.1;Name=EFB90438.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF7215_1950;product=hypothetical protein;protein_id=EFB90438.1;transl_table=11 GCA_000177335.1|ADFP01000082.1 Genbank gene 28247 28321 . - . ID=gene-HMPREF7215_1951;Name=HMPREF7215_1951;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1951 GCA_000177335.1|ADFP01000082.1 Genbank tRNA 28247 28321 . - . ID=rna-HMPREF7215_1951;Parent=gene-HMPREF7215_1951;gbkey=tRNA;locus_tag=HMPREF7215_1951;product=tRNA-Gly GCA_000177335.1|ADFP01000082.1 Genbank exon 28247 28321 . - . ID=exon-HMPREF7215_1951-1;Parent=rna-HMPREF7215_1951;gbkey=tRNA;locus_tag=HMPREF7215_1951;product=tRNA-Gly GCA_000177335.1|ADFP01000082.1 Genbank gene 28329 28407 . - . ID=gene-HMPREF7215_1952;Name=HMPREF7215_1952;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1952 GCA_000177335.1|ADFP01000082.1 Genbank tRNA 28329 28407 . - . ID=rna-HMPREF7215_1952;Parent=gene-HMPREF7215_1952;gbkey=tRNA;locus_tag=HMPREF7215_1952;product=tRNA-Asp GCA_000177335.1|ADFP01000082.1 Genbank exon 28329 28407 . - . ID=exon-HMPREF7215_1952-1;Parent=rna-HMPREF7215_1952;gbkey=tRNA;locus_tag=HMPREF7215_1952;product=tRNA-Asp GCA_000177335.1|ADFP01000082.1 Genbank gene 28617 28775 . + . ID=gene-HMPREF7215_1953;Name=HMPREF7215_1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1953 GCA_000177335.1|ADFP01000082.1 Genbank CDS 28617 28775 . + 0 ID=cds-EFB90439.1;Parent=gene-HMPREF7215_1953;Dbxref=NCBI_GP:EFB90439.1;Name=EFB90439.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1953;product=hypothetical protein;protein_id=EFB90439.1;transl_table=11 ##sequence-region ADFP01000081.1 1 1222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000081.1 Genbank region 1 1222 . + . ID=ADFP01000081.1:1..1222;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000081.1 Genbank gene 698 1222 . - . ID=gene-HMPREF7215_1677;Name=rrs;end_range=1222,.;gbkey=Gene;gene=rrs;gene_biotype=rRNA;locus_tag=HMPREF7215_1677;partial=true GCA_000177335.1|ADFP01000081.1 Genbank rRNA 698 1222 . - . ID=rna-HMPREF7215_1677;Parent=gene-HMPREF7215_1677;Note=This rRNA is physically truncated by the end of the contig.;end_range=1222,.;gbkey=rRNA;gene=rrs;locus_tag=HMPREF7215_1677;partial=true;product=16S ribosomal RNA GCA_000177335.1|ADFP01000081.1 Genbank exon 698 1222 . - . ID=exon-HMPREF7215_1677-1;Parent=rna-HMPREF7215_1677;Note=This rRNA is physically truncated by the end of the contig.;end_range=1222,.;gbkey=rRNA;gene=rrs;locus_tag=HMPREF7215_1677;partial=true;product=16S ribosomal RNA ##sequence-region ADFP01000080.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000080.1 Genbank region 1 506 . + . ID=ADFP01000080.1:1..506;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000079.1 1 69741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000079.1 Genbank region 1 69741 . + . ID=ADFP01000079.1:1..69741;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000079.1 Genbank gene 177 2294 . + . ID=gene-HMPREF7215_2077;Name=HMPREF7215_2077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2077 GCA_000177335.1|ADFP01000079.1 Genbank CDS 177 2294 . + 0 ID=cds-EFB90440.1;Parent=gene-HMPREF7215_2077;Dbxref=NCBI_GP:EFB90440.1;Name=EFB90440.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01734;gbkey=CDS;locus_tag=HMPREF7215_2077;product=phospholipase%2C patatin family;protein_id=EFB90440.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 2291 2425 . - . ID=gene-HMPREF7215_2076;Name=HMPREF7215_2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2076 GCA_000177335.1|ADFP01000079.1 Genbank CDS 2291 2425 . - 0 ID=cds-EFB90441.1;Parent=gene-HMPREF7215_2076;Dbxref=NCBI_GP:EFB90441.1;Name=EFB90441.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2076;product=hypothetical protein;protein_id=EFB90441.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 2445 3881 . + . ID=gene-HMPREF7215_2078;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2078 GCA_000177335.1|ADFP01000079.1 Genbank CDS 2445 3881 . + 0 ID=cds-EFB90442.1;Parent=gene-HMPREF7215_2078;Dbxref=NCBI_GP:EFB90442.1;Name=EFB90442.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408;gbkey=CDS;gene=proS;locus_tag=HMPREF7215_2078;product=proline--tRNA ligase;protein_id=EFB90442.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 3910 4641 . + . ID=gene-HMPREF7215_2079;Name=HMPREF7215_2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2079 GCA_000177335.1|ADFP01000079.1 Genbank CDS 3910 4641 . + 0 ID=cds-EFB90443.1;Parent=gene-HMPREF7215_2079;Dbxref=NCBI_GP:EFB90443.1;Name=EFB90443.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2079;product=hypothetical protein;protein_id=EFB90443.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 4667 6496 . + . ID=gene-HMPREF7215_2080;Name=HMPREF7215_2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2080 GCA_000177335.1|ADFP01000079.1 Genbank CDS 4667 6496 . + 0 ID=cds-EFB90444.1;Parent=gene-HMPREF7215_2080;Dbxref=NCBI_GP:EFB90444.1;Name=EFB90444.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF7215_2080;product=DEAD/DEAH box helicase;protein_id=EFB90444.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 6625 8154 . + . ID=gene-HMPREF7215_2081;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2081 GCA_000177335.1|ADFP01000079.1 Genbank CDS 6625 8154 . + 0 ID=cds-EFB90445.1;Parent=gene-HMPREF7215_2081;Dbxref=NCBI_GP:EFB90445.1;Name=EFB90445.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888;gbkey=CDS;gene=guaA;locus_tag=HMPREF7215_2081;product=GMP synthase (glutamine-hydrolyzing) domain protein;protein_id=EFB90445.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 9679 10407 . + . ID=gene-HMPREF7215_2082;Name=HMPREF7215_2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2082 GCA_000177335.1|ADFP01000079.1 Genbank CDS 9679 10407 . + 0 ID=cds-EFB90446.1;Parent=gene-HMPREF7215_2082;Dbxref=NCBI_GP:EFB90446.1;Name=EFB90446.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2082;product=hypothetical protein;protein_id=EFB90446.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 10499 10666 . + . ID=gene-HMPREF7215_2083;Name=HMPREF7215_2083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2083 GCA_000177335.1|ADFP01000079.1 Genbank CDS 10499 10666 . + 0 ID=cds-EFB90447.1;Parent=gene-HMPREF7215_2083;Dbxref=NCBI_GP:EFB90447.1;Name=EFB90447.1;gbkey=CDS;locus_tag=HMPREF7215_2083;product=hypothetical protein;protein_id=EFB90447.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 10700 10981 . + . ID=gene-HMPREF7215_2084;Name=HMPREF7215_2084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2084 GCA_000177335.1|ADFP01000079.1 Genbank CDS 10700 10981 . + 0 ID=cds-EFB90448.1;Parent=gene-HMPREF7215_2084;Dbxref=NCBI_GP:EFB90448.1;Name=EFB90448.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2084;product=hypothetical protein;protein_id=EFB90448.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 11145 12305 . + . ID=gene-HMPREF7215_2085;Name=HMPREF7215_2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2085 GCA_000177335.1|ADFP01000079.1 Genbank CDS 11145 12305 . + 0 ID=cds-EFB90449.1;Parent=gene-HMPREF7215_2085;Dbxref=NCBI_GP:EFB90449.1;Name=EFB90449.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2085;product=hypothetical protein;protein_id=EFB90449.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 12668 13300 . - . ID=gene-HMPREF7215_2086;Name=HMPREF7215_2086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2086 GCA_000177335.1|ADFP01000079.1 Genbank CDS 12668 13300 . - 0 ID=cds-EFB90450.1;Parent=gene-HMPREF7215_2086;Dbxref=NCBI_GP:EFB90450.1;Name=EFB90450.1;gbkey=CDS;locus_tag=HMPREF7215_2086;product=hypothetical protein;protein_id=EFB90450.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 13559 14533 . + . ID=gene-HMPREF7215_2087;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2087 GCA_000177335.1|ADFP01000079.1 Genbank CDS 13559 14533 . + 0 ID=cds-EFB90451.1;Parent=gene-HMPREF7215_2087;Dbxref=NCBI_GP:EFB90451.1;Name=EFB90451.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF7215_2087;product=4-phosphoerythronate dehydrogenase;protein_id=EFB90451.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 14613 15491 . - . ID=gene-HMPREF7215_2088;Name=HMPREF7215_2088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2088 GCA_000177335.1|ADFP01000079.1 Genbank CDS 14613 15491 . - 0 ID=cds-EFB90452.1;Parent=gene-HMPREF7215_2088;Dbxref=NCBI_GP:EFB90452.1;Name=EFB90452.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;locus_tag=HMPREF7215_2088;product=sugar-binding domain protein;protein_id=EFB90452.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 15840 16385 . + . ID=gene-HMPREF7215_2089;Name=HMPREF7215_2089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2089 GCA_000177335.1|ADFP01000079.1 Genbank CDS 15840 16385 . + 0 ID=cds-EFB90453.1;Parent=gene-HMPREF7215_2089;Dbxref=NCBI_GP:EFB90453.1;Name=EFB90453.1;gbkey=CDS;locus_tag=HMPREF7215_2089;product=hypothetical protein;protein_id=EFB90453.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 16414 16572 . + . ID=gene-HMPREF7215_2090;Name=HMPREF7215_2090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2090 GCA_000177335.1|ADFP01000079.1 Genbank CDS 16414 16572 . + 0 ID=cds-EFB90454.1;Parent=gene-HMPREF7215_2090;Dbxref=NCBI_GP:EFB90454.1;Name=EFB90454.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2090;product=hypothetical protein;protein_id=EFB90454.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 16572 17657 . + . ID=gene-HMPREF7215_2091;Name=HMPREF7215_2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2091 GCA_000177335.1|ADFP01000079.1 Genbank CDS 16572 17657 . + 0 ID=cds-EFB90455.1;Parent=gene-HMPREF7215_2091;Dbxref=NCBI_GP:EFB90455.1;Name=EFB90455.1;Note=identified by match to protein family HMM PF01070;gbkey=CDS;locus_tag=HMPREF7215_2091;product=dehydrogenase%2C FMN-dependent;protein_id=EFB90455.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 17802 18698 . - . ID=gene-HMPREF7215_2092;Name=bcpA;gbkey=Gene;gene=bcpA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2092 GCA_000177335.1|ADFP01000079.1 Genbank CDS 17802 18698 . - 0 ID=cds-EFB90456.1;Parent=gene-HMPREF7215_2092;Dbxref=NCBI_GP:EFB90456.1;Name=EFB90456.1;gbkey=CDS;gene=bcpA;locus_tag=HMPREF7215_2092;product=carboxyvinyl-carboxyphosphonate phosphorylmutase;protein_id=EFB90456.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 18822 19988 . - . ID=gene-HMPREF7215_2093;Name=HMPREF7215_2093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2093 GCA_000177335.1|ADFP01000079.1 Genbank CDS 18822 19988 . - 0 ID=cds-EFB90457.1;Parent=gene-HMPREF7215_2093;Dbxref=NCBI_GP:EFB90457.1;Name=EFB90457.1;Note=identified by match to protein family HMM PF04909;gbkey=CDS;locus_tag=HMPREF7215_2093;product=amidohydrolase family protein;protein_id=EFB90457.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 20005 21495 . - . ID=gene-HMPREF7215_2094;Name=HMPREF7215_2094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2094 GCA_000177335.1|ADFP01000079.1 Genbank CDS 20005 21495 . - 0 ID=cds-EFB90458.1;Parent=gene-HMPREF7215_2094;Dbxref=NCBI_GP:EFB90458.1;Name=EFB90458.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_2094;product=membrane protein;protein_id=EFB90458.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 21515 21985 . - . ID=gene-HMPREF7215_2095;Name=HMPREF7215_2095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2095 GCA_000177335.1|ADFP01000079.1 Genbank CDS 21515 21985 . - 0 ID=cds-EFB90459.1;Parent=gene-HMPREF7215_2095;Dbxref=NCBI_GP:EFB90459.1;Name=EFB90459.1;gbkey=CDS;locus_tag=HMPREF7215_2095;product=hypothetical protein;protein_id=EFB90459.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 21982 22098 . - . ID=gene-HMPREF7215_2096;Name=HMPREF7215_2096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2096 GCA_000177335.1|ADFP01000079.1 Genbank CDS 21982 22098 . - 0 ID=cds-EFB90460.1;Parent=gene-HMPREF7215_2096;Dbxref=NCBI_GP:EFB90460.1;Name=EFB90460.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2096;product=hypothetical protein;protein_id=EFB90460.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 22109 23134 . - . ID=gene-HMPREF7215_2097;Name=HMPREF7215_2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2097 GCA_000177335.1|ADFP01000079.1 Genbank CDS 22109 23134 . - 0 ID=cds-EFB90461.1;Parent=gene-HMPREF7215_2097;Dbxref=NCBI_GP:EFB90461.1;Name=EFB90461.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_2097;product=hypothetical protein;protein_id=EFB90461.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 23334 24266 . + . ID=gene-HMPREF7215_2098;Name=HMPREF7215_2098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2098 GCA_000177335.1|ADFP01000079.1 Genbank CDS 23334 24266 . + 0 ID=cds-EFB90462.1;Parent=gene-HMPREF7215_2098;Dbxref=NCBI_GP:EFB90462.1;Name=EFB90462.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2098;product=LysR substrate binding domain protein;protein_id=EFB90462.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 24276 24404 . - . ID=gene-HMPREF7215_2099;Name=HMPREF7215_2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2099 GCA_000177335.1|ADFP01000079.1 Genbank CDS 24276 24404 . - 0 ID=cds-EFB90463.1;Parent=gene-HMPREF7215_2099;Dbxref=NCBI_GP:EFB90463.1;Name=EFB90463.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2099;product=hypothetical protein;protein_id=EFB90463.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 24595 24708 . + . ID=gene-HMPREF7215_2100;Name=HMPREF7215_2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2100 GCA_000177335.1|ADFP01000079.1 Genbank CDS 24595 24708 . + 0 ID=cds-EFB90464.1;Parent=gene-HMPREF7215_2100;Dbxref=NCBI_GP:EFB90464.1;Name=EFB90464.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2100;product=hypothetical protein;protein_id=EFB90464.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 24894 26627 . + . ID=gene-HMPREF7215_2101;Name=HMPREF7215_2101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2101 GCA_000177335.1|ADFP01000079.1 Genbank CDS 24894 26627 . + 0 ID=cds-EFB90465.1;Parent=gene-HMPREF7215_2101;Dbxref=NCBI_GP:EFB90465.1;Name=EFB90465.1;Note=identified by match to protein family HMM PF01019;gbkey=CDS;locus_tag=HMPREF7215_2101;product=putative gamma-glutamyltransferase;protein_id=EFB90465.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 26680 27237 . + . ID=gene-HMPREF7215_2102;Name=HMPREF7215_2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2102 GCA_000177335.1|ADFP01000079.1 Genbank CDS 26680 27237 . + 0 ID=cds-EFB90466.1;Parent=gene-HMPREF7215_2102;Dbxref=NCBI_GP:EFB90466.1;Name=EFB90466.1;gbkey=CDS;locus_tag=HMPREF7215_2102;product=hypothetical protein;protein_id=EFB90466.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 27509 29236 . + . ID=gene-HMPREF7215_2103;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2103 GCA_000177335.1|ADFP01000079.1 Genbank CDS 27509 29236 . + 0 ID=cds-EFB90467.1;Parent=gene-HMPREF7215_2103;Dbxref=NCBI_GP:EFB90467.1;Name=EFB90467.1;Note=identified by match to protein family HMM TIGR01110;gbkey=CDS;gene=mdcA;locus_tag=HMPREF7215_2103;product=malonate decarboxylase%2C alpha subunit;protein_id=EFB90467.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 29233 29376 . + . ID=gene-HMPREF7215_2104;Name=HMPREF7215_2104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2104 GCA_000177335.1|ADFP01000079.1 Genbank CDS 29233 29376 . + 0 ID=cds-EFB90468.1;Parent=gene-HMPREF7215_2104;Dbxref=NCBI_GP:EFB90468.1;Name=EFB90468.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2104;product=hypothetical protein;protein_id=EFB90468.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 29373 30737 . + . ID=gene-HMPREF7215_2105;Name=HMPREF7215_2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2105 GCA_000177335.1|ADFP01000079.1 Genbank CDS 29373 30737 . + 0 ID=cds-EFB90469.1;Parent=gene-HMPREF7215_2105;Dbxref=NCBI_GP:EFB90469.1;Name=EFB90469.1;Note=identified by match to protein family HMM PF03606%3B match to protein family HMM PF06808;gbkey=CDS;locus_tag=HMPREF7215_2105;product=TRAP transporter%2C DctM-like membrane protein;protein_id=EFB90469.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 30756 30920 . + . ID=gene-HMPREF7215_2106;Name=HMPREF7215_2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2106 GCA_000177335.1|ADFP01000079.1 Genbank CDS 30756 30920 . + 0 ID=cds-EFB90470.1;Parent=gene-HMPREF7215_2106;Dbxref=NCBI_GP:EFB90470.1;Name=EFB90470.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2106;product=hypothetical protein;protein_id=EFB90470.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 30945 32261 . + . ID=gene-HMPREF7215_2108;Name=HMPREF7215_2108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2108 GCA_000177335.1|ADFP01000079.1 Genbank CDS 30945 32261 . + 0 ID=cds-EFB90471.1;Parent=gene-HMPREF7215_2108;Dbxref=NCBI_GP:EFB90471.1;Name=EFB90471.1;gbkey=CDS;locus_tag=HMPREF7215_2108;product=hypothetical protein;protein_id=EFB90471.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 32258 32380 . - . ID=gene-HMPREF7215_2107;Name=HMPREF7215_2107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2107 GCA_000177335.1|ADFP01000079.1 Genbank CDS 32258 32380 . - 0 ID=cds-EFB90472.1;Parent=gene-HMPREF7215_2107;Dbxref=NCBI_GP:EFB90472.1;Name=EFB90472.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2107;product=hypothetical protein;protein_id=EFB90472.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 32358 32474 . + . ID=gene-HMPREF7215_2109;Name=HMPREF7215_2109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2109 GCA_000177335.1|ADFP01000079.1 Genbank CDS 32358 32474 . + 0 ID=cds-EFB90473.1;Parent=gene-HMPREF7215_2109;Dbxref=NCBI_GP:EFB90473.1;Name=EFB90473.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2109;product=hypothetical protein;protein_id=EFB90473.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 32524 33057 . - . ID=gene-HMPREF7215_2110;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=HMPREF7215_2110 GCA_000177335.1|ADFP01000079.1 Genbank CDS 32524 33057 . - 0 ID=cds-EFB90474.1;Parent=gene-HMPREF7215_2110;Dbxref=NCBI_GP:EFB90474.1;Name=EFB90474.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;gene=ogt;locus_tag=HMPREF7215_2110;product=6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein;protein_id=EFB90474.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 33060 33743 . - . ID=gene-HMPREF7215_2111;Name=HMPREF7215_2111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2111 GCA_000177335.1|ADFP01000079.1 Genbank CDS 33060 33743 . - 0 ID=cds-EFB90475.1;Parent=gene-HMPREF7215_2111;Dbxref=NCBI_GP:EFB90475.1;Name=EFB90475.1;Note=identified by match to protein family HMM PF00730;gbkey=CDS;locus_tag=HMPREF7215_2111;product=putative phage virion morphogenesis protein;protein_id=EFB90475.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 33804 33998 . - . ID=gene-HMPREF7215_2112;Name=HMPREF7215_2112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2112 GCA_000177335.1|ADFP01000079.1 Genbank CDS 33804 33998 . - 0 ID=cds-EFB90476.1;Parent=gene-HMPREF7215_2112;Dbxref=NCBI_GP:EFB90476.1;Name=EFB90476.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2112;product=hypothetical protein;protein_id=EFB90476.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 34014 35291 . + . ID=gene-HMPREF7215_2113;Name=HMPREF7215_2113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2113 GCA_000177335.1|ADFP01000079.1 Genbank CDS 34014 35291 . + 0 ID=cds-EFB90477.1;Parent=gene-HMPREF7215_2113;Dbxref=NCBI_GP:EFB90477.1;Name=EFB90477.1;gbkey=CDS;locus_tag=HMPREF7215_2113;product=hypothetical protein;protein_id=EFB90477.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 35408 36196 . - . ID=gene-HMPREF7215_2114;Name=gufA;gbkey=Gene;gene=gufA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2114 GCA_000177335.1|ADFP01000079.1 Genbank CDS 35408 36196 . - 0 ID=cds-EFB90478.1;Parent=gene-HMPREF7215_2114;Dbxref=NCBI_GP:EFB90478.1;Name=EFB90478.1;Note=identified by match to protein family HMM PF02535;gbkey=CDS;gene=gufA;locus_tag=HMPREF7215_2114;product=metal cation transporter%2C ZIP family;protein_id=EFB90478.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 36213 37004 . - . ID=gene-HMPREF7215_2115;Name=HMPREF7215_2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2115 GCA_000177335.1|ADFP01000079.1 Genbank CDS 36213 37004 . - 0 ID=cds-EFB90479.1;Parent=gene-HMPREF7215_2115;Dbxref=NCBI_GP:EFB90479.1;Name=EFB90479.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF7215_2115;product=methyltransferase domain protein;protein_id=EFB90479.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 37024 37584 . - . ID=gene-HMPREF7215_2116;Name=HMPREF7215_2116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2116 GCA_000177335.1|ADFP01000079.1 Genbank CDS 37024 37584 . - 0 ID=cds-EFB90480.1;Parent=gene-HMPREF7215_2116;Dbxref=NCBI_GP:EFB90480.1;Name=EFB90480.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF7215_2116;product=methyltransferase domain protein;protein_id=EFB90480.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 37624 37836 . + . ID=gene-HMPREF7215_2117;Name=HMPREF7215_2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2117 GCA_000177335.1|ADFP01000079.1 Genbank CDS 37624 37836 . + 0 ID=cds-EFB90481.1;Parent=gene-HMPREF7215_2117;Dbxref=NCBI_GP:EFB90481.1;Name=EFB90481.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2117;product=hypothetical protein;protein_id=EFB90481.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 37911 38138 . + . ID=gene-HMPREF7215_2118;Name=HMPREF7215_2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2118 GCA_000177335.1|ADFP01000079.1 Genbank CDS 37911 38138 . + 0 ID=cds-EFB90482.1;Parent=gene-HMPREF7215_2118;Dbxref=NCBI_GP:EFB90482.1;Name=EFB90482.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2118;product=hypothetical protein;protein_id=EFB90482.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 38193 40283 . + . ID=gene-HMPREF7215_2119;Name=HMPREF7215_2119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2119 GCA_000177335.1|ADFP01000079.1 Genbank CDS 38193 40283 . + 0 ID=cds-EFB90483.1;Parent=gene-HMPREF7215_2119;Dbxref=NCBI_GP:EFB90483.1;Name=EFB90483.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF7215_2119;product=heavy metal translocating P-type ATPase;protein_id=EFB90483.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 40285 40596 . + . ID=gene-HMPREF7215_2120;Name=HMPREF7215_2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2120 GCA_000177335.1|ADFP01000079.1 Genbank CDS 40285 40596 . + 0 ID=cds-EFB90484.1;Parent=gene-HMPREF7215_2120;Dbxref=NCBI_GP:EFB90484.1;Name=EFB90484.1;gbkey=CDS;locus_tag=HMPREF7215_2120;product=hypothetical protein;protein_id=EFB90484.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 40636 40845 . - . ID=gene-HMPREF7215_2121;Name=HMPREF7215_2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2121 GCA_000177335.1|ADFP01000079.1 Genbank CDS 40636 40845 . - 0 ID=cds-EFB90485.1;Parent=gene-HMPREF7215_2121;Dbxref=NCBI_GP:EFB90485.1;Name=EFB90485.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2121;product=hypothetical protein;protein_id=EFB90485.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 40882 41793 . + . ID=gene-HMPREF7215_2122;Name=HMPREF7215_2122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2122 GCA_000177335.1|ADFP01000079.1 Genbank CDS 40882 41793 . + 0 ID=cds-EFB90486.1;Parent=gene-HMPREF7215_2122;Dbxref=NCBI_GP:EFB90486.1;Name=EFB90486.1;Note=identified by match to protein family HMM PF00892%3B match to protein family HMM PF08449;gbkey=CDS;locus_tag=HMPREF7215_2122;product=putative membrane protein;protein_id=EFB90486.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 41934 42053 . - . ID=gene-HMPREF7215_2123;Name=HMPREF7215_2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2123 GCA_000177335.1|ADFP01000079.1 Genbank CDS 41934 42053 . - 0 ID=cds-EFB90487.1;Parent=gene-HMPREF7215_2123;Dbxref=NCBI_GP:EFB90487.1;Name=EFB90487.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2123;product=hypothetical protein;protein_id=EFB90487.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 42046 42357 . + . ID=gene-HMPREF7215_2124;Name=HMPREF7215_2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2124 GCA_000177335.1|ADFP01000079.1 Genbank CDS 42046 42357 . + 0 ID=cds-EFB90488.1;Parent=gene-HMPREF7215_2124;Dbxref=NCBI_GP:EFB90488.1;Name=EFB90488.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2124;product=hypothetical protein;protein_id=EFB90488.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 42589 42741 . + . ID=gene-HMPREF7215_2125;Name=HMPREF7215_2125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2125 GCA_000177335.1|ADFP01000079.1 Genbank CDS 42589 42741 . + 0 ID=cds-EFB90489.1;Parent=gene-HMPREF7215_2125;Dbxref=NCBI_GP:EFB90489.1;Name=EFB90489.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2125;product=hypothetical protein;protein_id=EFB90489.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 42923 43384 . + . ID=gene-HMPREF7215_2126;Name=HMPREF7215_2126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2126 GCA_000177335.1|ADFP01000079.1 Genbank CDS 42923 43384 . + 0 ID=cds-EFB90490.1;Parent=gene-HMPREF7215_2126;Dbxref=NCBI_GP:EFB90490.1;Name=EFB90490.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_2126;product=putative membrane protein;protein_id=EFB90490.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 43381 43494 . + . ID=gene-HMPREF7215_2127;Name=HMPREF7215_2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2127 GCA_000177335.1|ADFP01000079.1 Genbank CDS 43381 43494 . + 0 ID=cds-EFB90491.1;Parent=gene-HMPREF7215_2127;Dbxref=NCBI_GP:EFB90491.1;Name=EFB90491.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2127;product=hypothetical protein;protein_id=EFB90491.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 43962 44216 . - . ID=gene-HMPREF7215_2128;Name=HMPREF7215_2128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2128 GCA_000177335.1|ADFP01000079.1 Genbank CDS 43962 44216 . - 0 ID=cds-EFB90492.1;Parent=gene-HMPREF7215_2128;Dbxref=NCBI_GP:EFB90492.1;Name=EFB90492.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2128;product=hypothetical protein;protein_id=EFB90492.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 44510 44632 . + . ID=gene-HMPREF7215_2129;Name=HMPREF7215_2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2129 GCA_000177335.1|ADFP01000079.1 Genbank CDS 44510 44632 . + 0 ID=cds-EFB90493.1;Parent=gene-HMPREF7215_2129;Dbxref=NCBI_GP:EFB90493.1;Name=EFB90493.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2129;product=hypothetical protein;protein_id=EFB90493.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 44733 46394 . - . ID=gene-HMPREF7215_2130;Name=HMPREF7215_2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2130 GCA_000177335.1|ADFP01000079.1 Genbank CDS 44733 46394 . - 0 ID=cds-EFB90494.1;Parent=gene-HMPREF7215_2130;Dbxref=NCBI_GP:EFB90494.1;Name=EFB90494.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_2130;product=amidohydrolase family protein;protein_id=EFB90494.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 46505 47998 . - . ID=gene-HMPREF7215_2131;Name=HMPREF7215_2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2131 GCA_000177335.1|ADFP01000079.1 Genbank CDS 46505 47998 . - 0 ID=cds-EFB90495.1;Parent=gene-HMPREF7215_2131;Dbxref=NCBI_GP:EFB90495.1;Name=EFB90495.1;gbkey=CDS;locus_tag=HMPREF7215_2131;product=hypothetical protein;protein_id=EFB90495.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 48093 49379 . - . ID=gene-HMPREF7215_2132;Name=HMPREF7215_2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2132 GCA_000177335.1|ADFP01000079.1 Genbank CDS 48093 49379 . - 0 ID=cds-EFB90496.1;Parent=gene-HMPREF7215_2132;Dbxref=NCBI_GP:EFB90496.1;Name=EFB90496.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF03600%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_2132;product=TRAP transporter%2C DctM subunit;protein_id=EFB90496.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 49372 49707 . - . ID=gene-HMPREF7215_2133;Name=HMPREF7215_2133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2133 GCA_000177335.1|ADFP01000079.1 Genbank CDS 49372 49707 . - 0 ID=cds-EFB90497.1;Parent=gene-HMPREF7215_2133;Dbxref=NCBI_GP:EFB90497.1;Name=EFB90497.1;gbkey=CDS;locus_tag=HMPREF7215_2133;product=hypothetical protein;protein_id=EFB90497.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 49960 50925 . - . ID=gene-HMPREF7215_2134;Name=HMPREF7215_2134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2134 GCA_000177335.1|ADFP01000079.1 Genbank CDS 49960 50925 . - 0 ID=cds-EFB90498.1;Parent=gene-HMPREF7215_2134;Dbxref=NCBI_GP:EFB90498.1;Name=EFB90498.1;Note=identified by match to protein family HMM PF03480%3B match to protein family HMM TIGR00787;gbkey=CDS;locus_tag=HMPREF7215_2134;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB90498.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 51059 51895 . - . ID=gene-HMPREF7215_2135;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2135 GCA_000177335.1|ADFP01000079.1 Genbank CDS 51059 51895 . - 0 ID=cds-EFB90499.1;Parent=gene-HMPREF7215_2135;Dbxref=NCBI_GP:EFB90499.1;Name=EFB90499.1;Note=identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222;gbkey=CDS;gene=panB;locus_tag=HMPREF7215_2135;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=EFB90499.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 52006 52908 . - . ID=gene-HMPREF7215_2136;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2136 GCA_000177335.1|ADFP01000079.1 Genbank CDS 52006 52908 . - 0 ID=cds-EFB90500.1;Parent=gene-HMPREF7215_2136;Dbxref=NCBI_GP:EFB90500.1;Name=EFB90500.1;Note=identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745;gbkey=CDS;gene=panE;locus_tag=HMPREF7215_2136;product=2-dehydropantoate 2-reductase;protein_id=EFB90500.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 52978 53094 . + . ID=gene-HMPREF7215_2137;Name=HMPREF7215_2137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2137 GCA_000177335.1|ADFP01000079.1 Genbank CDS 52978 53094 . + 0 ID=cds-EFB90501.1;Parent=gene-HMPREF7215_2137;Dbxref=NCBI_GP:EFB90501.1;Name=EFB90501.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2137;product=hypothetical protein;protein_id=EFB90501.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 53148 53285 . - . ID=gene-HMPREF7215_2138;Name=HMPREF7215_2138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2138 GCA_000177335.1|ADFP01000079.1 Genbank CDS 53148 53285 . - 0 ID=cds-EFB90502.1;Parent=gene-HMPREF7215_2138;Dbxref=NCBI_GP:EFB90502.1;Name=EFB90502.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2138;product=hypothetical protein;protein_id=EFB90502.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 54144 54962 . + . ID=gene-HMPREF7215_2139;Name=HMPREF7215_2139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2139 GCA_000177335.1|ADFP01000079.1 Genbank CDS 54144 54962 . + 0 ID=cds-EFB90503.1;Parent=gene-HMPREF7215_2139;Dbxref=NCBI_GP:EFB90503.1;Name=EFB90503.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF7215_2139;product=IclR helix-turn-helix domain protein;protein_id=EFB90503.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 55071 55229 . + . ID=gene-HMPREF7215_2140;Name=HMPREF7215_2140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2140 GCA_000177335.1|ADFP01000079.1 Genbank CDS 55071 55229 . + 0 ID=cds-EFB90504.1;Parent=gene-HMPREF7215_2140;Dbxref=NCBI_GP:EFB90504.1;Name=EFB90504.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2140;product=hypothetical protein;protein_id=EFB90504.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 55569 56414 . + . ID=gene-HMPREF7215_2141;Name=HMPREF7215_2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2141 GCA_000177335.1|ADFP01000079.1 Genbank CDS 55569 56414 . + 0 ID=cds-EFB90505.1;Parent=gene-HMPREF7215_2141;Dbxref=NCBI_GP:EFB90505.1;Name=EFB90505.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_2141;product=putative membrane protein;protein_id=EFB90505.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 56440 57405 . + . ID=gene-HMPREF7215_2142;Name=HMPREF7215_2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2142 GCA_000177335.1|ADFP01000079.1 Genbank CDS 56440 57405 . + 0 ID=cds-EFB90506.1;Parent=gene-HMPREF7215_2142;Dbxref=NCBI_GP:EFB90506.1;Name=EFB90506.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2142;product=hypothetical protein;protein_id=EFB90506.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 57543 57899 . + . ID=gene-HMPREF7215_2143;Name=HMPREF7215_2143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2143 GCA_000177335.1|ADFP01000079.1 Genbank CDS 57543 57899 . + 0 ID=cds-EFB90507.1;Parent=gene-HMPREF7215_2143;Dbxref=NCBI_GP:EFB90507.1;Name=EFB90507.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;locus_tag=HMPREF7215_2143;product=YcfA-like protein;protein_id=EFB90507.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 57919 58224 . + . ID=gene-HMPREF7215_2145;Name=HMPREF7215_2145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2145 GCA_000177335.1|ADFP01000079.1 Genbank CDS 57919 58224 . + 0 ID=cds-EFB90508.1;Parent=gene-HMPREF7215_2145;Dbxref=NCBI_GP:EFB90508.1;Name=EFB90508.1;gbkey=CDS;locus_tag=HMPREF7215_2145;product=putative toxin-antitoxin system%2C antitoxin component%2C HicB family;protein_id=EFB90508.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 58199 58324 . - . ID=gene-HMPREF7215_2144;Name=HMPREF7215_2144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2144 GCA_000177335.1|ADFP01000079.1 Genbank CDS 58199 58324 . - 0 ID=cds-EFB90509.1;Parent=gene-HMPREF7215_2144;Dbxref=NCBI_GP:EFB90509.1;Name=EFB90509.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2144;product=hypothetical protein;protein_id=EFB90509.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 58349 59221 . - . ID=gene-HMPREF7215_2146;Name=HMPREF7215_2146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2146 GCA_000177335.1|ADFP01000079.1 Genbank CDS 58349 59221 . - 0 ID=cds-EFB90510.1;Parent=gene-HMPREF7215_2146;Dbxref=NCBI_GP:EFB90510.1;Name=EFB90510.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2146;product=LysR substrate binding domain protein;protein_id=EFB90510.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 59248 59463 . - . ID=gene-HMPREF7215_2147;Name=HMPREF7215_2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2147 GCA_000177335.1|ADFP01000079.1 Genbank CDS 59248 59463 . - 0 ID=cds-EFB90511.1;Parent=gene-HMPREF7215_2147;Dbxref=NCBI_GP:EFB90511.1;Name=EFB90511.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2147;product=hypothetical protein;protein_id=EFB90511.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 59460 60065 . - . ID=gene-HMPREF7215_2148;Name=HMPREF7215_2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2148 GCA_000177335.1|ADFP01000079.1 Genbank CDS 59460 60065 . - 0 ID=cds-EFB90512.1;Parent=gene-HMPREF7215_2148;Dbxref=NCBI_GP:EFB90512.1;Name=EFB90512.1;Note=identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00758;gbkey=CDS;locus_tag=HMPREF7215_2148;product=uracil-DNA glycosylase A;protein_id=EFB90512.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 60110 60607 . - . ID=gene-HMPREF7215_2149;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=HMPREF7215_2149 GCA_000177335.1|ADFP01000079.1 Genbank CDS 60110 60607 . - 0 ID=cds-EFB90513.1;Parent=gene-HMPREF7215_2149;Dbxref=NCBI_GP:EFB90513.1;Name=EFB90513.1;Note=identified by match to protein family HMM PF02283;gbkey=CDS;gene=cobU;locus_tag=HMPREF7215_2149;product=adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase;protein_id=EFB90513.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 60705 64964 . - . ID=gene-HMPREF7215_2150;Name=HMPREF7215_2150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2150 GCA_000177335.1|ADFP01000079.1 Genbank CDS 60705 64964 . - 0 ID=cds-EFB90514.1;Parent=gene-HMPREF7215_2150;Dbxref=NCBI_GP:EFB90514.1;Name=EFB90514.1;Note=identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF7215_2150;product=SNF2 family N-terminal domain protein;protein_id=EFB90514.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 65135 66406 . + . ID=gene-HMPREF7215_2151;Name=HMPREF7215_2151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2151 GCA_000177335.1|ADFP01000079.1 Genbank CDS 65135 66406 . + 0 ID=cds-EFB90515.1;Parent=gene-HMPREF7215_2151;Dbxref=NCBI_GP:EFB90515.1;Name=EFB90515.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF7215_2151;product=outer membrane efflux protein;protein_id=EFB90515.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 66403 67578 . + . ID=gene-HMPREF7215_2152;Name=HMPREF7215_2152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2152 GCA_000177335.1|ADFP01000079.1 Genbank CDS 66403 67578 . + 0 ID=cds-EFB90516.1;Parent=gene-HMPREF7215_2152;Dbxref=NCBI_GP:EFB90516.1;Name=EFB90516.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF7215_2152;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFB90516.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 67580 68278 . + . ID=gene-HMPREF7215_2153;Name=HMPREF7215_2153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2153 GCA_000177335.1|ADFP01000079.1 Genbank CDS 67580 68278 . + 0 ID=cds-EFB90517.1;Parent=gene-HMPREF7215_2153;Dbxref=NCBI_GP:EFB90517.1;Name=EFB90517.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2153;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90517.1;transl_table=11 GCA_000177335.1|ADFP01000079.1 Genbank gene 68294 69517 . + . ID=gene-HMPREF7215_2154;Name=HMPREF7215_2154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2154 GCA_000177335.1|ADFP01000079.1 Genbank CDS 68294 69517 . + 0 ID=cds-EFB90518.1;Parent=gene-HMPREF7215_2154;Dbxref=NCBI_GP:EFB90518.1;Name=EFB90518.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF7215_2154;product=efflux ABC transporter%2C permease protein;protein_id=EFB90518.1;transl_table=11 ##sequence-region ADFP01000078.1 1 5412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000078.1 Genbank region 1 5412 . + . ID=ADFP01000078.1:1..5412;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000078.1 Genbank gene 5 3388 . + . ID=gene-HMPREF7215_1471;Name=HMPREF7215_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1471 GCA_000177335.1|ADFP01000078.1 Genbank CDS 5 3388 . + 0 ID=cds-EFB90519.1;Parent=gene-HMPREF7215_1471;Dbxref=NCBI_GP:EFB90519.1;Name=EFB90519.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02415%3B match to protein family HMM PF03797%3B match to protein family HMM TIGR01376%3B match to protein family HMM TIGR01414;gbkey=CDS;locus_tag=HMPREF7215_1471;product=outer membrane autotransporter barrel domain protein;protein_id=EFB90519.1;transl_table=11 GCA_000177335.1|ADFP01000078.1 Genbank gene 3791 4168 . - . ID=gene-HMPREF7215_1472;Name=HMPREF7215_1472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1472 GCA_000177335.1|ADFP01000078.1 Genbank CDS 3791 4168 . - 0 ID=cds-EFB90520.1;Parent=gene-HMPREF7215_1472;Dbxref=NCBI_GP:EFB90520.1;Name=EFB90520.1;Note=identified by match to protein family HMM PF01042;gbkey=CDS;locus_tag=HMPREF7215_1472;product=putative endoribonuclease L-PSP;protein_id=EFB90520.1;transl_table=11 GCA_000177335.1|ADFP01000078.1 Genbank gene 4185 5309 . - . ID=gene-HMPREF7215_1473;Name=HMPREF7215_1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1473 GCA_000177335.1|ADFP01000078.1 Genbank CDS 4185 5309 . - 0 ID=cds-EFB90521.1;Parent=gene-HMPREF7215_1473;Dbxref=NCBI_GP:EFB90521.1;Name=EFB90521.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1473;product=hypothetical protein;protein_id=EFB90521.1;transl_table=11 ##sequence-region ADFP01000077.1 1 1772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000077.1 Genbank region 1 1772 . + . ID=ADFP01000077.1:1..1772;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000076.1 1 1486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000076.1 Genbank region 1 1486 . + . ID=ADFP01000076.1:1..1486;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000076.1 Genbank gene 1 864 . - . ID=gene-HMPREF7215_1657;Name=HMPREF7215_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1657;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000076.1 Genbank CDS 1 864 . - 0 ID=cds-EFB90522.1;Parent=gene-HMPREF7215_1657;Dbxref=NCBI_GP:EFB90522.1;Name=EFB90522.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1657;partial=true;product=transporter%2C major facilitator family protein;protein_id=EFB90522.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000075.1 1 31397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000075.1 Genbank region 1 31397 . + . ID=ADFP01000075.1:1..31397;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000075.1 Genbank gene 184 471 . + . ID=gene-HMPREF7215_1854;Name=HMPREF7215_1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1854 GCA_000177335.1|ADFP01000075.1 Genbank CDS 184 471 . + 0 ID=cds-EFB90523.1;Parent=gene-HMPREF7215_1854;Dbxref=NCBI_GP:EFB90523.1;Name=EFB90523.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1854;product=hypothetical protein;protein_id=EFB90523.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 628 1146 . - . ID=gene-HMPREF7215_1855;Name=HMPREF7215_1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1855 GCA_000177335.1|ADFP01000075.1 Genbank CDS 628 1146 . - 0 ID=cds-EFB90524.1;Parent=gene-HMPREF7215_1855;Dbxref=NCBI_GP:EFB90524.1;Name=EFB90524.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=HMPREF7215_1855;product=transposase%2C IS4 family;protein_id=EFB90524.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 1623 2594 . + . ID=gene-HMPREF7215_1856;Name=HMPREF7215_1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1856 GCA_000177335.1|ADFP01000075.1 Genbank CDS 1623 2594 . + 0 ID=cds-EFB90525.1;Parent=gene-HMPREF7215_1856;Dbxref=NCBI_GP:EFB90525.1;Name=EFB90525.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_1856;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB90525.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 2627 3616 . + . ID=gene-HMPREF7215_1857;Name=HMPREF7215_1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1857 GCA_000177335.1|ADFP01000075.1 Genbank CDS 2627 3616 . + 0 ID=cds-EFB90526.1;Parent=gene-HMPREF7215_1857;Dbxref=NCBI_GP:EFB90526.1;Name=EFB90526.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_1857;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB90526.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 3680 4861 . + . ID=gene-HMPREF7215_1858;Name=patB;gbkey=Gene;gene=patB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1858 GCA_000177335.1|ADFP01000075.1 Genbank CDS 3680 4861 . + 0 ID=cds-EFB90527.1;Parent=gene-HMPREF7215_1858;Dbxref=NCBI_GP:EFB90527.1;Name=EFB90527.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;gene=patB;locus_tag=HMPREF7215_1858;product=cystathionine beta-lyase PatB;protein_id=EFB90527.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 4885 5859 . + . ID=gene-HMPREF7215_1859;Name=HMPREF7215_1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1859 GCA_000177335.1|ADFP01000075.1 Genbank CDS 4885 5859 . + 0 ID=cds-EFB90528.1;Parent=gene-HMPREF7215_1859;Dbxref=NCBI_GP:EFB90528.1;Name=EFB90528.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_1859;product=hypothetical protein;protein_id=EFB90528.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 5896 6333 . + . ID=gene-HMPREF7215_1860;Name=HMPREF7215_1860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1860 GCA_000177335.1|ADFP01000075.1 Genbank CDS 5896 6333 . + 0 ID=cds-EFB90529.1;Parent=gene-HMPREF7215_1860;Dbxref=NCBI_GP:EFB90529.1;Name=EFB90529.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1860;product=hypothetical protein;protein_id=EFB90529.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 6414 7934 . + . ID=gene-HMPREF7215_1861;Name=HMPREF7215_1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1861 GCA_000177335.1|ADFP01000075.1 Genbank CDS 6414 7934 . + 0 ID=cds-EFB90530.1;Parent=gene-HMPREF7215_1861;Dbxref=NCBI_GP:EFB90530.1;Name=EFB90530.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_1861;product=membrane protein;protein_id=EFB90530.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 8058 9935 . + . ID=gene-HMPREF7215_1862;Name=HMPREF7215_1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1862 GCA_000177335.1|ADFP01000075.1 Genbank CDS 8058 9935 . + 0 ID=cds-EFB90531.1;Parent=gene-HMPREF7215_1862;Dbxref=NCBI_GP:EFB90531.1;Name=EFB90531.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;locus_tag=HMPREF7215_1862;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=EFB90531.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 9938 10897 . - . ID=gene-HMPREF7215_1863;Name=HMPREF7215_1863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1863 GCA_000177335.1|ADFP01000075.1 Genbank CDS 9938 10897 . - 0 ID=cds-EFB90532.1;Parent=gene-HMPREF7215_1863;Dbxref=NCBI_GP:EFB90532.1;Name=EFB90532.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1863;product=LysR substrate binding domain protein;protein_id=EFB90532.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 10988 12379 . + . ID=gene-HMPREF7215_1864;Name=HMPREF7215_1864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1864 GCA_000177335.1|ADFP01000075.1 Genbank CDS 10988 12379 . + 0 ID=cds-EFB90533.1;Parent=gene-HMPREF7215_1864;Dbxref=NCBI_GP:EFB90533.1;Name=EFB90533.1;Note=identified by match to protein family HMM PF03972;gbkey=CDS;locus_tag=HMPREF7215_1864;product=MmgE/PrpD family protein;protein_id=EFB90533.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 12397 13668 . + . ID=gene-HMPREF7215_1865;Name=HMPREF7215_1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1865 GCA_000177335.1|ADFP01000075.1 Genbank CDS 12397 13668 . + 0 ID=cds-EFB90534.1;Parent=gene-HMPREF7215_1865;Dbxref=NCBI_GP:EFB90534.1;Name=EFB90534.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02086;gbkey=CDS;locus_tag=HMPREF7215_1865;product=3-isopropylmalate dehydratase large subunit;protein_id=EFB90534.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 13692 14198 . + . ID=gene-HMPREF7215_1866;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1866 GCA_000177335.1|ADFP01000075.1 Genbank CDS 13692 14198 . + 0 ID=cds-EFB90535.1;Parent=gene-HMPREF7215_1866;Dbxref=NCBI_GP:EFB90535.1;Name=EFB90535.1;Note=identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR02087;gbkey=CDS;gene=leuD;locus_tag=HMPREF7215_1866;product=3-isopropylmalate dehydratase small subunit;protein_id=EFB90535.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 14223 15581 . + . ID=gene-HMPREF7215_1867;Name=HMPREF7215_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1867 GCA_000177335.1|ADFP01000075.1 Genbank CDS 14223 15581 . + 0 ID=cds-EFB90536.1;Parent=gene-HMPREF7215_1867;Dbxref=NCBI_GP:EFB90536.1;Name=EFB90536.1;Note=identified by match to protein family HMM PF03972;gbkey=CDS;locus_tag=HMPREF7215_1867;product=MmgE/PrpD family protein;protein_id=EFB90536.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 15584 15733 . - . ID=gene-HMPREF7215_1868;Name=HMPREF7215_1868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1868 GCA_000177335.1|ADFP01000075.1 Genbank CDS 15584 15733 . - 0 ID=cds-EFB90537.1;Parent=gene-HMPREF7215_1868;Dbxref=NCBI_GP:EFB90537.1;Name=EFB90537.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1868;product=hypothetical protein;protein_id=EFB90537.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 15819 18131 . + . ID=gene-HMPREF7215_1869;Name=HMPREF7215_1869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1869 GCA_000177335.1|ADFP01000075.1 Genbank CDS 15819 18131 . + 0 ID=cds-EFB90538.1;Parent=gene-HMPREF7215_1869;Dbxref=NCBI_GP:EFB90538.1;Name=EFB90538.1;Note=identified by match to protein family HMM PF00330;gbkey=CDS;locus_tag=HMPREF7215_1869;product=aconitase family protein;protein_id=EFB90538.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 18213 18326 . + . ID=gene-HMPREF7215_1870;Name=HMPREF7215_1870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1870 GCA_000177335.1|ADFP01000075.1 Genbank CDS 18213 18326 . + 0 ID=cds-EFB90539.1;Parent=gene-HMPREF7215_1870;Dbxref=NCBI_GP:EFB90539.1;Name=EFB90539.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1870;product=hypothetical protein;protein_id=EFB90539.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 18515 19393 . - . ID=gene-HMPREF7215_1871;Name=HMPREF7215_1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1871 GCA_000177335.1|ADFP01000075.1 Genbank CDS 18515 19393 . - 0 ID=cds-EFB90540.1;Parent=gene-HMPREF7215_1871;Dbxref=NCBI_GP:EFB90540.1;Name=EFB90540.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1871;product=LysR substrate binding domain protein;protein_id=EFB90540.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 19487 19657 . + . ID=gene-HMPREF7215_1872;Name=HMPREF7215_1872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1872 GCA_000177335.1|ADFP01000075.1 Genbank CDS 19487 19657 . + 0 ID=cds-EFB90541.1;Parent=gene-HMPREF7215_1872;Dbxref=NCBI_GP:EFB90541.1;Name=EFB90541.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1872;product=hypothetical protein;protein_id=EFB90541.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 19733 19888 . + . ID=gene-HMPREF7215_1873;Name=HMPREF7215_1873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1873 GCA_000177335.1|ADFP01000075.1 Genbank CDS 19733 19888 . + 0 ID=cds-EFB90542.1;Parent=gene-HMPREF7215_1873;Dbxref=NCBI_GP:EFB90542.1;Name=EFB90542.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1873;product=hypothetical protein;protein_id=EFB90542.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 19970 20521 . - . ID=gene-HMPREF7215_1874;Name=HMPREF7215_1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1874 GCA_000177335.1|ADFP01000075.1 Genbank CDS 19970 20521 . - 0 ID=cds-EFB90543.1;Parent=gene-HMPREF7215_1874;Dbxref=NCBI_GP:EFB90543.1;Name=EFB90543.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;locus_tag=HMPREF7215_1874;product=DnaJ domain protein;protein_id=EFB90543.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 20538 20687 . + . ID=gene-HMPREF7215_1875;Name=HMPREF7215_1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1875 GCA_000177335.1|ADFP01000075.1 Genbank CDS 20538 20687 . + 0 ID=cds-EFB90544.1;Parent=gene-HMPREF7215_1875;Dbxref=NCBI_GP:EFB90544.1;Name=EFB90544.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1875;product=hypothetical protein;protein_id=EFB90544.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 20674 21438 . + . ID=gene-HMPREF7215_1876;Name=HMPREF7215_1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1876 GCA_000177335.1|ADFP01000075.1 Genbank CDS 20674 21438 . + 0 ID=cds-EFB90545.1;Parent=gene-HMPREF7215_1876;Dbxref=NCBI_GP:EFB90545.1;Name=EFB90545.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF7215_1876;product=SNARE-like domain protein;protein_id=EFB90545.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 21628 22830 . - . ID=gene-HMPREF7215_1877;Name=HMPREF7215_1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1877 GCA_000177335.1|ADFP01000075.1 Genbank CDS 21628 22830 . - 0 ID=cds-EFB90546.1;Parent=gene-HMPREF7215_1877;Dbxref=NCBI_GP:EFB90546.1;Name=EFB90546.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1877;product=amidohydrolase;protein_id=EFB90546.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 22855 24024 . - . ID=gene-HMPREF7215_1878;Name=HMPREF7215_1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1878 GCA_000177335.1|ADFP01000075.1 Genbank CDS 22855 24024 . - 0 ID=cds-EFB90547.1;Parent=gene-HMPREF7215_1878;Dbxref=NCBI_GP:EFB90547.1;Name=EFB90547.1;gbkey=CDS;locus_tag=HMPREF7215_1878;product=hypothetical protein;protein_id=EFB90547.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 24240 24353 . - . ID=gene-HMPREF7215_1879;Name=HMPREF7215_1879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1879 GCA_000177335.1|ADFP01000075.1 Genbank CDS 24240 24353 . - 0 ID=cds-EFB90548.1;Parent=gene-HMPREF7215_1879;Dbxref=NCBI_GP:EFB90548.1;Name=EFB90548.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1879;product=hypothetical protein;protein_id=EFB90548.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 24598 25965 . + . ID=gene-HMPREF7215_1880;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1880 GCA_000177335.1|ADFP01000075.1 Genbank CDS 24598 25965 . + 0 ID=cds-EFB90549.1;Parent=gene-HMPREF7215_1880;Dbxref=NCBI_GP:EFB90549.1;Name=EFB90549.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450;gbkey=CDS;gene=trmE;locus_tag=HMPREF7215_1880;product=tRNA modification GTPase TrmE;protein_id=EFB90549.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 26026 26157 . - . ID=gene-HMPREF7215_1881;Name=HMPREF7215_1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1881 GCA_000177335.1|ADFP01000075.1 Genbank CDS 26026 26157 . - 0 ID=cds-EFB90550.1;Parent=gene-HMPREF7215_1881;Dbxref=NCBI_GP:EFB90550.1;Name=EFB90550.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1881;product=hypothetical protein;protein_id=EFB90550.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 26138 26680 . + . ID=gene-HMPREF7215_1882;Name=HMPREF7215_1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1882 GCA_000177335.1|ADFP01000075.1 Genbank CDS 26138 26680 . + 0 ID=cds-EFB90551.1;Parent=gene-HMPREF7215_1882;Dbxref=NCBI_GP:EFB90551.1;Name=EFB90551.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF7215_1882;product=nitroreductase family protein;protein_id=EFB90551.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 26989 27318 . - . ID=gene-HMPREF7215_1883;Name=HMPREF7215_1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1883 GCA_000177335.1|ADFP01000075.1 Genbank CDS 26989 27318 . - 0 ID=cds-EFB90552.1;Parent=gene-HMPREF7215_1883;Dbxref=NCBI_GP:EFB90552.1;Name=EFB90552.1;Note=identified by match to protein family HMM PF01638;gbkey=CDS;locus_tag=HMPREF7215_1883;product=transcriptional regulator%2C HxlR family;protein_id=EFB90552.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 27404 27559 . - . ID=gene-HMPREF7215_1884;Name=HMPREF7215_1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1884 GCA_000177335.1|ADFP01000075.1 Genbank CDS 27404 27559 . - 0 ID=cds-EFB90553.1;Parent=gene-HMPREF7215_1884;Dbxref=NCBI_GP:EFB90553.1;Name=EFB90553.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1884;product=hypothetical protein;protein_id=EFB90553.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 27721 28755 . + . ID=gene-HMPREF7215_1885;Name=HMPREF7215_1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1885 GCA_000177335.1|ADFP01000075.1 Genbank CDS 27721 28755 . + 0 ID=cds-EFB90554.1;Parent=gene-HMPREF7215_1885;Dbxref=NCBI_GP:EFB90554.1;Name=EFB90554.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_1885;product=radical SAM domain protein;protein_id=EFB90554.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 28752 29729 . + . ID=gene-HMPREF7215_1886;Name=HMPREF7215_1886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1886 GCA_000177335.1|ADFP01000075.1 Genbank CDS 28752 29729 . + 0 ID=cds-EFB90555.1;Parent=gene-HMPREF7215_1886;Dbxref=NCBI_GP:EFB90555.1;Name=EFB90555.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240;gbkey=CDS;locus_tag=HMPREF7215_1886;product=GroES-like protein;protein_id=EFB90555.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 29857 30480 . - . ID=gene-HMPREF7215_1887;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=HMPREF7215_1887 GCA_000177335.1|ADFP01000075.1 Genbank CDS 29857 30480 . - 0 ID=cds-EFB90556.1;Parent=gene-HMPREF7215_1887;Dbxref=NCBI_GP:EFB90556.1;Name=EFB90556.1;Note=identified by match to protein family HMM PF01470%3B match to protein family HMM TIGR00504;gbkey=CDS;gene=pcp;locus_tag=HMPREF7215_1887;product=pyroglutamyl-peptidase I;protein_id=EFB90556.1;transl_table=11 GCA_000177335.1|ADFP01000075.1 Genbank gene 30518 31397 . - . ID=gene-HMPREF7215_1888;Name=HMPREF7215_1888;end_range=31397,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1888;partial=true GCA_000177335.1|ADFP01000075.1 Genbank CDS 30518 31397 . - 1 ID=cds-EFB90557.1;Parent=gene-HMPREF7215_1888;Dbxref=NCBI_GP:EFB90557.1;Name=EFB90557.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00155;end_range=31397,.;gbkey=CDS;locus_tag=HMPREF7215_1888;partial=true;product=aminotransferase%2C class I/II;protein_id=EFB90557.1;transl_table=11 ##sequence-region ADFP01000074.1 1 25861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000074.1 Genbank region 1 25861 . + . ID=ADFP01000074.1:1..25861;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000074.1 Genbank gene 1 1308 . - . ID=gene-HMPREF7215_2343;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=HMPREF7215_2343;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000074.1 Genbank CDS 1 1308 . - 0 ID=cds-EFB90558.1;Parent=gene-HMPREF7215_2343;Dbxref=NCBI_GP:EFB90558.1;Name=EFB90558.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;locus_tag=HMPREF7215_2343;partial=true;product=signal recognition particle protein;protein_id=EFB90558.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 1301 1648 . - . ID=gene-HMPREF7215_2344;Name=HMPREF7215_2344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2344 GCA_000177335.1|ADFP01000074.1 Genbank CDS 1301 1648 . - 0 ID=cds-EFB90559.1;Parent=gene-HMPREF7215_2344;Dbxref=NCBI_GP:EFB90559.1;Name=EFB90559.1;Note=identified by match to protein family HMM PF04297%3B match to protein family HMM PF04545%3B match to protein family HMM PF04967%3B match to protein family HMM PF08279%3B match to protein family HMM PF08281;gbkey=CDS;locus_tag=HMPREF7215_2344;product=helix-turn-helix protein%2C YlxM/p13 family;protein_id=EFB90559.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 1708 1971 . + . ID=gene-HMPREF7215_2345;Name=HMPREF7215_2345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2345 GCA_000177335.1|ADFP01000074.1 Genbank CDS 1708 1971 . + 0 ID=cds-EFB90560.1;Parent=gene-HMPREF7215_2345;Dbxref=NCBI_GP:EFB90560.1;Name=EFB90560.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2345;product=hypothetical protein;protein_id=EFB90560.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 1940 2644 . + . ID=gene-HMPREF7215_2346;Name=HMPREF7215_2346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2346 GCA_000177335.1|ADFP01000074.1 Genbank CDS 1940 2644 . + 0 ID=cds-EFB90561.1;Parent=gene-HMPREF7215_2346;Dbxref=NCBI_GP:EFB90561.1;Name=EFB90561.1;Note=identified by match to protein family HMM PF06555;gbkey=CDS;locus_tag=HMPREF7215_2346;product=hypothetical protein;protein_id=EFB90561.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 2641 3636 . + . ID=gene-HMPREF7215_2347;Name=HMPREF7215_2347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2347 GCA_000177335.1|ADFP01000074.1 Genbank CDS 2641 3636 . + 0 ID=cds-EFB90562.1;Parent=gene-HMPREF7215_2347;Dbxref=NCBI_GP:EFB90562.1;Name=EFB90562.1;Note=identified by match to protein family HMM PF00710;gbkey=CDS;locus_tag=HMPREF7215_2347;product=Asparaginase;protein_id=EFB90562.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 4022 5560 . - . ID=gene-HMPREF7215_2348;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=HMPREF7215_2348 GCA_000177335.1|ADFP01000074.1 Genbank CDS 4022 5560 . - 0 ID=cds-EFB90563.1;Parent=gene-HMPREF7215_2348;Dbxref=NCBI_GP:EFB90563.1;Name=EFB90563.1;Note=identified by match to protein family HMM PF00221%3B match to protein family HMM TIGR01225;gbkey=CDS;gene=hutH;locus_tag=HMPREF7215_2348;product=histidine ammonia-lyase;protein_id=EFB90563.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 5651 7696 . - . ID=gene-HMPREF7215_2349;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=HMPREF7215_2349 GCA_000177335.1|ADFP01000074.1 Genbank CDS 5651 7696 . - 0 ID=cds-EFB90564.1;Parent=gene-HMPREF7215_2349;Dbxref=NCBI_GP:EFB90564.1;Name=EFB90564.1;Note=identified by match to protein family HMM PF01175%3B match to protein family HMM TIGR01228;gbkey=CDS;gene=hutU;locus_tag=HMPREF7215_2349;product=urocanate hydratase;protein_id=EFB90564.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 7900 9150 . - . ID=gene-HMPREF7215_2350;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=HMPREF7215_2350 GCA_000177335.1|ADFP01000074.1 Genbank CDS 7900 9150 . - 0 ID=cds-EFB90565.1;Parent=gene-HMPREF7215_2350;Dbxref=NCBI_GP:EFB90565.1;Name=EFB90565.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01224;gbkey=CDS;gene=hutI;locus_tag=HMPREF7215_2350;product=imidazolonepropionase;protein_id=EFB90565.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 9173 9928 . - . ID=gene-HMPREF7215_2351;Name=HMPREF7215_2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2351 GCA_000177335.1|ADFP01000074.1 Genbank CDS 9173 9928 . - 0 ID=cds-EFB90566.1;Parent=gene-HMPREF7215_2351;Dbxref=NCBI_GP:EFB90566.1;Name=EFB90566.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF7215_2351;product=IclR helix-turn-helix domain protein;protein_id=EFB90566.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 9944 10072 . + . ID=gene-HMPREF7215_2353;Name=HMPREF7215_2353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2353 GCA_000177335.1|ADFP01000074.1 Genbank CDS 9944 10072 . + 0 ID=cds-EFB90567.1;Parent=gene-HMPREF7215_2353;Dbxref=NCBI_GP:EFB90567.1;Name=EFB90567.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2353;product=hypothetical protein;protein_id=EFB90567.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 10034 10210 . - . ID=gene-HMPREF7215_2352;Name=HMPREF7215_2352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2352 GCA_000177335.1|ADFP01000074.1 Genbank CDS 10034 10210 . - 0 ID=cds-EFB90568.1;Parent=gene-HMPREF7215_2352;Dbxref=NCBI_GP:EFB90568.1;Name=EFB90568.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2352;product=hypothetical protein;protein_id=EFB90568.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 10201 10830 . - . ID=gene-HMPREF7215_2354;Name=HMPREF7215_2354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2354 GCA_000177335.1|ADFP01000074.1 Genbank CDS 10201 10830 . - 0 ID=cds-EFB90569.1;Parent=gene-HMPREF7215_2354;Dbxref=NCBI_GP:EFB90569.1;Name=EFB90569.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2354;product=hypothetical protein;protein_id=EFB90569.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 10993 12078 . - . ID=gene-HMPREF7215_2355;Name=HMPREF7215_2355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2355 GCA_000177335.1|ADFP01000074.1 Genbank CDS 10993 12078 . - 0 ID=cds-EFB90570.1;Parent=gene-HMPREF7215_2355;Dbxref=NCBI_GP:EFB90570.1;Name=EFB90570.1;gbkey=CDS;locus_tag=HMPREF7215_2355;product=hypothetical protein;protein_id=EFB90570.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 12217 12900 . + . ID=gene-HMPREF7215_2356;Name=HMPREF7215_2356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2356 GCA_000177335.1|ADFP01000074.1 Genbank CDS 12217 12900 . + 0 ID=cds-EFB90571.1;Parent=gene-HMPREF7215_2356;Dbxref=NCBI_GP:EFB90571.1;Name=EFB90571.1;Note=identified by match to protein family HMM PF04366;gbkey=CDS;locus_tag=HMPREF7215_2356;product=hypothetical protein;protein_id=EFB90571.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 12983 13060 . - . ID=gene-HMPREF7215_2357;Name=HMPREF7215_2357;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2357 GCA_000177335.1|ADFP01000074.1 Genbank tRNA 12983 13060 . - . ID=rna-HMPREF7215_2357;Parent=gene-HMPREF7215_2357;gbkey=tRNA;locus_tag=HMPREF7215_2357;product=tRNA-Thr GCA_000177335.1|ADFP01000074.1 Genbank exon 12983 13060 . - . ID=exon-HMPREF7215_2357-1;Parent=rna-HMPREF7215_2357;gbkey=tRNA;locus_tag=HMPREF7215_2357;product=tRNA-Thr GCA_000177335.1|ADFP01000074.1 Genbank gene 13066 13153 . - . ID=gene-HMPREF7215_2358;Name=HMPREF7215_2358;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2358 GCA_000177335.1|ADFP01000074.1 Genbank tRNA 13066 13153 . - . ID=rna-HMPREF7215_2358;Parent=gene-HMPREF7215_2358;gbkey=tRNA;locus_tag=HMPREF7215_2358;product=tRNA-Tyr GCA_000177335.1|ADFP01000074.1 Genbank exon 13066 13153 . - . ID=exon-HMPREF7215_2358-1;Parent=rna-HMPREF7215_2358;gbkey=tRNA;locus_tag=HMPREF7215_2358;product=tRNA-Tyr GCA_000177335.1|ADFP01000074.1 Genbank gene 13175 13252 . - . ID=gene-HMPREF7215_2359;Name=HMPREF7215_2359;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2359 GCA_000177335.1|ADFP01000074.1 Genbank tRNA 13175 13252 . - . ID=rna-HMPREF7215_2359;Parent=gene-HMPREF7215_2359;gbkey=tRNA;locus_tag=HMPREF7215_2359;product=tRNA-Thr GCA_000177335.1|ADFP01000074.1 Genbank exon 13175 13252 . - . ID=exon-HMPREF7215_2359-1;Parent=rna-HMPREF7215_2359;gbkey=tRNA;locus_tag=HMPREF7215_2359;product=tRNA-Thr GCA_000177335.1|ADFP01000074.1 Genbank gene 13444 14850 . - . ID=gene-HMPREF7215_2360;Name=HMPREF7215_2360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2360 GCA_000177335.1|ADFP01000074.1 Genbank CDS 13444 14850 . - 0 ID=cds-EFB90572.1;Parent=gene-HMPREF7215_2360;Dbxref=NCBI_GP:EFB90572.1;Name=EFB90572.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF7215_2360;product=outer membrane efflux protein;protein_id=EFB90572.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 15027 15287 . - . ID=gene-HMPREF7215_2361;Name=HMPREF7215_2361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2361 GCA_000177335.1|ADFP01000074.1 Genbank CDS 15027 15287 . - 0 ID=cds-EFB90573.1;Parent=gene-HMPREF7215_2361;Dbxref=NCBI_GP:EFB90573.1;Name=EFB90573.1;Note=identified by match to protein family HMM PF00462;gbkey=CDS;locus_tag=HMPREF7215_2361;product=glutaredoxin;protein_id=EFB90573.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 15335 16225 . - . ID=gene-HMPREF7215_2362;Name=HMPREF7215_2362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2362 GCA_000177335.1|ADFP01000074.1 Genbank CDS 15335 16225 . - 0 ID=cds-EFB90574.1;Parent=gene-HMPREF7215_2362;Dbxref=NCBI_GP:EFB90574.1;Name=EFB90574.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF7215_2362;product=peptidase%2C M23 family;protein_id=EFB90574.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 16292 17764 . - . ID=gene-HMPREF7215_2363;Name=HMPREF7215_2363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2363 GCA_000177335.1|ADFP01000074.1 Genbank CDS 16292 17764 . - 0 ID=cds-EFB90575.1;Parent=gene-HMPREF7215_2363;Dbxref=NCBI_GP:EFB90575.1;Name=EFB90575.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;locus_tag=HMPREF7215_2363;product=putative long-chain-fatty-acid--CoA ligase;protein_id=EFB90575.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 17889 18305 . - . ID=gene-HMPREF7215_2364;Name=HMPREF7215_2364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2364 GCA_000177335.1|ADFP01000074.1 Genbank CDS 17889 18305 . - 0 ID=cds-EFB90576.1;Parent=gene-HMPREF7215_2364;Dbxref=NCBI_GP:EFB90576.1;Name=EFB90576.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=HMPREF7215_2364;product=acetyltransferase%2C GNAT family;protein_id=EFB90576.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 18345 18593 . - . ID=gene-HMPREF7215_2365;Name=HMPREF7215_2365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2365 GCA_000177335.1|ADFP01000074.1 Genbank CDS 18345 18593 . - 0 ID=cds-EFB90577.1;Parent=gene-HMPREF7215_2365;Dbxref=NCBI_GP:EFB90577.1;Name=EFB90577.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2365;product=hypothetical protein;protein_id=EFB90577.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank binding_site 18610 18794 . + . ID=id-ADFP01000074.1:18610..18794;Note=cobalamin riboswitch%3B Rfam score 87.14;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00174 GCA_000177335.1|ADFP01000074.1 Genbank gene 18868 19821 . + . ID=gene-HMPREF7215_2367;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=HMPREF7215_2367 GCA_000177335.1|ADFP01000074.1 Genbank CDS 18868 19821 . + 0 ID=cds-EFB90578.1;Parent=gene-HMPREF7215_2367;Dbxref=NCBI_GP:EFB90578.1;Name=EFB90578.1;Note=identified by match to protein family HMM PF01903%3B match to protein family HMM PF06180;gbkey=CDS;gene=cbiK;locus_tag=HMPREF7215_2367;product=cobalt chelatase (CbiK);protein_id=EFB90578.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 19824 20840 . + . ID=gene-HMPREF7215_2368;Name=HMPREF7215_2368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2368 GCA_000177335.1|ADFP01000074.1 Genbank CDS 19824 20840 . + 0 ID=cds-EFB90579.1;Parent=gene-HMPREF7215_2368;Dbxref=NCBI_GP:EFB90579.1;Name=EFB90579.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF7215_2368;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFB90579.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 20816 21622 . + . ID=gene-HMPREF7215_2369;Name=HMPREF7215_2369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2369 GCA_000177335.1|ADFP01000074.1 Genbank CDS 20816 21622 . + 0 ID=cds-EFB90580.1;Parent=gene-HMPREF7215_2369;Dbxref=NCBI_GP:EFB90580.1;Name=EFB90580.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2369;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90580.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 21595 22449 . + . ID=gene-HMPREF7215_2370;Name=HMPREF7215_2370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2370 GCA_000177335.1|ADFP01000074.1 Genbank CDS 21595 22449 . + 0 ID=cds-EFB90581.1;Parent=gene-HMPREF7215_2370;Dbxref=NCBI_GP:EFB90581.1;Name=EFB90581.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_2370;product=periplasmic binding protein;protein_id=EFB90581.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 22454 23143 . + . ID=gene-HMPREF7215_2371;Name=HMPREF7215_2371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2371 GCA_000177335.1|ADFP01000074.1 Genbank CDS 22454 23143 . + 0 ID=cds-EFB90582.1;Parent=gene-HMPREF7215_2371;Dbxref=NCBI_GP:EFB90582.1;Name=EFB90582.1;Note=identified by match to protein family HMM PF00590;gbkey=CDS;locus_tag=HMPREF7215_2371;product=putative precorrin-2 C(20)-methyltransferase;protein_id=EFB90582.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 23146 24045 . + . ID=gene-HMPREF7215_2372;Name=HMPREF7215_2372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2372 GCA_000177335.1|ADFP01000074.1 Genbank CDS 23146 24045 . + 0 ID=cds-EFB90583.1;Parent=gene-HMPREF7215_2372;Dbxref=NCBI_GP:EFB90583.1;Name=EFB90583.1;gbkey=CDS;locus_tag=HMPREF7215_2372;product=hypothetical protein;protein_id=EFB90583.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 24077 24688 . + . ID=gene-HMPREF7215_2373;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=HMPREF7215_2373 GCA_000177335.1|ADFP01000074.1 Genbank CDS 24077 24688 . + 0 ID=cds-EFB90584.1;Parent=gene-HMPREF7215_2373;Dbxref=NCBI_GP:EFB90584.1;Name=EFB90584.1;Note=identified by match to protein family HMM PF02570;gbkey=CDS;gene=cobH;locus_tag=HMPREF7215_2373;product=precorrin-8X methylmutase;protein_id=EFB90584.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 24672 25772 . + . ID=gene-HMPREF7215_2374;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2374 GCA_000177335.1|ADFP01000074.1 Genbank CDS 24672 25772 . + 0 ID=cds-EFB90585.1;Parent=gene-HMPREF7215_2374;Dbxref=NCBI_GP:EFB90585.1;Name=EFB90585.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01888%3B match to protein family HMM TIGR00312;gbkey=CDS;gene=cbiD;locus_tag=HMPREF7215_2374;product=cobalamin biosynthesis protein CbiD;protein_id=EFB90585.1;transl_table=11 GCA_000177335.1|ADFP01000074.1 Genbank gene 25762 25861 . + . ID=gene-HMPREF7215_2375;Name=HMPREF7215_2375;end_range=25861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2375;partial=true GCA_000177335.1|ADFP01000074.1 Genbank CDS 25762 25861 . + 0 ID=cds-EFB90586.1;Parent=gene-HMPREF7215_2375;Dbxref=NCBI_GP:EFB90586.1;Name=EFB90586.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=25861,.;gbkey=CDS;locus_tag=HMPREF7215_2375;partial=true;product=hypothetical protein;protein_id=EFB90586.1;transl_table=11 ##sequence-region ADFP01000073.1 1 703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000073.1 Genbank region 1 703 . + . ID=ADFP01000073.1:1..703;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000073.1 Genbank gene 1 118 . - . ID=gene-HMPREF7215_1665;Name=HMPREF7215_1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1665;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000073.1 Genbank CDS 1 118 . - 0 ID=cds-EFB90587.1;Parent=gene-HMPREF7215_1665;Dbxref=NCBI_GP:EFB90587.1;Name=EFB90587.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1665;partial=true;product=putative modification methylase EcoRI;protein_id=EFB90587.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000072.1 1 23628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000072.1 Genbank region 1 23628 . + . ID=ADFP01000072.1:1..23628;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000072.1 Genbank gene 1 149 . + . ID=gene-HMPREF7215_0705;Name=HMPREF7215_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0705;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000072.1 Genbank CDS 1 149 . + 2 ID=cds-EFB90588.1;Parent=gene-HMPREF7215_0705;Dbxref=NCBI_GP:EFB90588.1;Name=EFB90588.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0705;partial=true;product=hypothetical protein;protein_id=EFB90588.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 346 1278 . - . ID=gene-HMPREF7215_0706;Name=HMPREF7215_0706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0706 GCA_000177335.1|ADFP01000072.1 Genbank CDS 346 1278 . - 0 ID=cds-EFB90589.1;Parent=gene-HMPREF7215_0706;Dbxref=NCBI_GP:EFB90589.1;Name=EFB90589.1;Note=identified by match to protein family HMM PF02492;gbkey=CDS;locus_tag=HMPREF7215_0706;product=CobW/P47K family protein;protein_id=EFB90589.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 1349 2410 . - . ID=gene-HMPREF7215_0707;Name=aDH;gbkey=Gene;gene=aDH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0707 GCA_000177335.1|ADFP01000072.1 Genbank CDS 1349 2410 . - 0 ID=cds-EFB90590.1;Parent=gene-HMPREF7215_0707;Dbxref=NCBI_GP:EFB90590.1;Name=EFB90590.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240;gbkey=CDS;gene=aDH;locus_tag=HMPREF7215_0707;product=NADP-dependent alcohol dehydrogenase;protein_id=EFB90590.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 2505 4250 . + . ID=gene-HMPREF7215_0708;Name=HMPREF7215_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0708 GCA_000177335.1|ADFP01000072.1 Genbank CDS 2505 4250 . + 0 ID=cds-EFB90591.1;Parent=gene-HMPREF7215_0708;Dbxref=NCBI_GP:EFB90591.1;Name=EFB90591.1;Note=identified by match to protein family HMM PF03606%3B match to protein family HMM PF03806;gbkey=CDS;locus_tag=HMPREF7215_0708;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB90591.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 4339 5511 . + . ID=gene-HMPREF7215_0709;Name=HMPREF7215_0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0709 GCA_000177335.1|ADFP01000072.1 Genbank CDS 4339 5511 . + 0 ID=cds-EFB90592.1;Parent=gene-HMPREF7215_0709;Dbxref=NCBI_GP:EFB90592.1;Name=EFB90592.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_0709;product=amidohydrolase;protein_id=EFB90592.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 5615 5752 . - . ID=gene-HMPREF7215_0710;Name=HMPREF7215_0710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0710 GCA_000177335.1|ADFP01000072.1 Genbank CDS 5615 5752 . - 0 ID=cds-EFB90593.1;Parent=gene-HMPREF7215_0710;Dbxref=NCBI_GP:EFB90593.1;Name=EFB90593.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0710;product=hypothetical protein;protein_id=EFB90593.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 5726 7357 . + . ID=gene-HMPREF7215_0711;Name=HMPREF7215_0711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0711 GCA_000177335.1|ADFP01000072.1 Genbank CDS 5726 7357 . + 0 ID=cds-EFB90594.1;Parent=gene-HMPREF7215_0711;Dbxref=NCBI_GP:EFB90594.1;Name=EFB90594.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880;gbkey=CDS;locus_tag=HMPREF7215_0711;product=phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;protein_id=EFB90594.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 7378 7704 . + . ID=gene-HMPREF7215_0712;Name=HMPREF7215_0712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0712 GCA_000177335.1|ADFP01000072.1 Genbank CDS 7378 7704 . + 0 ID=cds-EFB90595.1;Parent=gene-HMPREF7215_0712;Dbxref=NCBI_GP:EFB90595.1;Name=EFB90595.1;gbkey=CDS;locus_tag=HMPREF7215_0712;product=hypothetical protein;protein_id=EFB90595.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 7848 8669 . + . ID=gene-HMPREF7215_0713;Name=HMPREF7215_0713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0713 GCA_000177335.1|ADFP01000072.1 Genbank CDS 7848 8669 . + 0 ID=cds-EFB90596.1;Parent=gene-HMPREF7215_0713;Dbxref=NCBI_GP:EFB90596.1;Name=EFB90596.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF09674%3B match to protein family HMM TIGR02757;gbkey=CDS;locus_tag=HMPREF7215_0713;product=TIGR02757 family protein;protein_id=EFB90596.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 8666 9181 . + . ID=gene-HMPREF7215_0714;Name=HMPREF7215_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0714 GCA_000177335.1|ADFP01000072.1 Genbank CDS 8666 9181 . + 0 ID=cds-EFB90597.1;Parent=gene-HMPREF7215_0714;Dbxref=NCBI_GP:EFB90597.1;Name=EFB90597.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534;gbkey=CDS;locus_tag=HMPREF7215_0714;product=redoxin family protein;protein_id=EFB90597.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 9181 9318 . + . ID=gene-HMPREF7215_0715;Name=HMPREF7215_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0715 GCA_000177335.1|ADFP01000072.1 Genbank CDS 9181 9318 . + 0 ID=cds-EFB90598.1;Parent=gene-HMPREF7215_0715;Dbxref=NCBI_GP:EFB90598.1;Name=EFB90598.1;gbkey=CDS;locus_tag=HMPREF7215_0715;product=hypothetical protein;protein_id=EFB90598.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 9311 10207 . + . ID=gene-HMPREF7215_0716;Name=HMPREF7215_0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0716 GCA_000177335.1|ADFP01000072.1 Genbank CDS 9311 10207 . + 0 ID=cds-EFB90599.1;Parent=gene-HMPREF7215_0716;Dbxref=NCBI_GP:EFB90599.1;Name=EFB90599.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_0716;product=4Fe-4S binding domain protein;protein_id=EFB90599.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 10393 10983 . + . ID=gene-HMPREF7215_0717;Name=HMPREF7215_0717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0717 GCA_000177335.1|ADFP01000072.1 Genbank CDS 10393 10983 . + 0 ID=cds-EFB90600.1;Parent=gene-HMPREF7215_0717;Dbxref=NCBI_GP:EFB90600.1;Name=EFB90600.1;Note=identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573;gbkey=CDS;locus_tag=HMPREF7215_0717;product=exonuclease%2C DNA polymerase III%2C epsilon subunit family;protein_id=EFB90600.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 11472 12440 . + . ID=gene-HMPREF7215_0718;Name=HMPREF7215_0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0718 GCA_000177335.1|ADFP01000072.1 Genbank CDS 11472 12440 . + 0 ID=cds-EFB90601.1;Parent=gene-HMPREF7215_0718;Dbxref=NCBI_GP:EFB90601.1;Name=EFB90601.1;Note=identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=HMPREF7215_0718;product=transposase%2C IS4 family;protein_id=EFB90601.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 13053 13397 . + . ID=gene-HMPREF7215_0719;Name=HMPREF7215_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0719 GCA_000177335.1|ADFP01000072.1 Genbank CDS 13053 13397 . + 0 ID=cds-EFB90602.1;Parent=gene-HMPREF7215_0719;Dbxref=NCBI_GP:EFB90602.1;Name=EFB90602.1;gbkey=CDS;locus_tag=HMPREF7215_0719;product=hypothetical protein;protein_id=EFB90602.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 14353 15435 . + . ID=gene-HMPREF7215_0721;Name=HMPREF7215_0721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0721 GCA_000177335.1|ADFP01000072.1 Genbank CDS 14353 15435 . + 0 ID=cds-EFB90603.1;Parent=gene-HMPREF7215_0721;Dbxref=NCBI_GP:EFB90603.1;Name=EFB90603.1;Note=identified by match to protein family HMM PF08808;gbkey=CDS;locus_tag=HMPREF7215_0721;product=RES domain protein;protein_id=EFB90603.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 15430 15630 . - . ID=gene-HMPREF7215_0720;Name=HMPREF7215_0720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0720 GCA_000177335.1|ADFP01000072.1 Genbank CDS 15430 15630 . - 0 ID=cds-EFB90604.1;Parent=gene-HMPREF7215_0720;Dbxref=NCBI_GP:EFB90604.1;Name=EFB90604.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0720;product=hypothetical protein;protein_id=EFB90604.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 15701 17068 . - . ID=gene-HMPREF7215_0722;Name=HMPREF7215_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0722 GCA_000177335.1|ADFP01000072.1 Genbank CDS 15701 17068 . - 0 ID=cds-EFB90605.1;Parent=gene-HMPREF7215_0722;Dbxref=NCBI_GP:EFB90605.1;Name=EFB90605.1;Note=identified by match to protein family HMM PF00860;gbkey=CDS;locus_tag=HMPREF7215_0722;product=putative permease;protein_id=EFB90605.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 17257 17697 . - . ID=gene-HMPREF7215_0723;Name=HMPREF7215_0723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0723 GCA_000177335.1|ADFP01000072.1 Genbank CDS 17257 17697 . - 0 ID=cds-EFB90606.1;Parent=gene-HMPREF7215_0723;Dbxref=NCBI_GP:EFB90606.1;Name=EFB90606.1;Note=identified by match to protein family HMM PF00011;gbkey=CDS;locus_tag=HMPREF7215_0723;product=Hsp20/alpha crystallin family protein;protein_id=EFB90606.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 17932 18072 . + . ID=gene-HMPREF7215_0725;Name=HMPREF7215_0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0725 GCA_000177335.1|ADFP01000072.1 Genbank CDS 17932 18072 . + 0 ID=cds-EFB90607.1;Parent=gene-HMPREF7215_0725;Dbxref=NCBI_GP:EFB90607.1;Name=EFB90607.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0725;product=hypothetical protein;protein_id=EFB90607.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 18048 19871 . - . ID=gene-HMPREF7215_0724;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0724 GCA_000177335.1|ADFP01000072.1 Genbank CDS 18048 19871 . - 0 ID=cds-EFB90608.1;Parent=gene-HMPREF7215_0724;Dbxref=NCBI_GP:EFB90608.1;Name=EFB90608.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=hflB;locus_tag=HMPREF7215_0724;product=ATP-dependent metallopeptidase HflB;protein_id=EFB90608.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 20001 20177 . + . ID=gene-HMPREF7215_0726;Name=HMPREF7215_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0726 GCA_000177335.1|ADFP01000072.1 Genbank CDS 20001 20177 . + 0 ID=cds-EFB90609.1;Parent=gene-HMPREF7215_0726;Dbxref=NCBI_GP:EFB90609.1;Name=EFB90609.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0726;product=hypothetical protein;protein_id=EFB90609.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 20216 20626 . - . ID=gene-HMPREF7215_0727;Name=HMPREF7215_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0727 GCA_000177335.1|ADFP01000072.1 Genbank CDS 20216 20626 . - 0 ID=cds-EFB90610.1;Parent=gene-HMPREF7215_0727;Dbxref=NCBI_GP:EFB90610.1;Name=EFB90610.1;Note=identified by match to protein family HMM PF04138;gbkey=CDS;locus_tag=HMPREF7215_0727;product=GtrA-like protein;protein_id=EFB90610.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 20619 21623 . - . ID=gene-HMPREF7215_0728;Name=HMPREF7215_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0728 GCA_000177335.1|ADFP01000072.1 Genbank CDS 20619 21623 . - 0 ID=cds-EFB90611.1;Parent=gene-HMPREF7215_0728;Dbxref=NCBI_GP:EFB90611.1;Name=EFB90611.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_0728;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB90611.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 21655 23193 . - . ID=gene-HMPREF7215_0729;Name=HMPREF7215_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0729 GCA_000177335.1|ADFP01000072.1 Genbank CDS 21655 23193 . - 0 ID=cds-EFB90612.1;Parent=gene-HMPREF7215_0729;Dbxref=NCBI_GP:EFB90612.1;Name=EFB90612.1;gbkey=CDS;locus_tag=HMPREF7215_0729;product=hypothetical protein;protein_id=EFB90612.1;transl_table=11 GCA_000177335.1|ADFP01000072.1 Genbank gene 23334 23621 . - . ID=gene-HMPREF7215_0730;Name=HMPREF7215_0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0730 GCA_000177335.1|ADFP01000072.1 Genbank CDS 23334 23621 . - 0 ID=cds-EFB90613.1;Parent=gene-HMPREF7215_0730;Dbxref=NCBI_GP:EFB90613.1;Name=EFB90613.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0730;product=hypothetical protein;protein_id=EFB90613.1;transl_table=11 ##sequence-region ADFP01000071.1 1 64734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000071.1 Genbank region 1 64734 . + . ID=ADFP01000071.1:1..64734;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000071.1 Genbank gene 1 267 . - . ID=gene-HMPREF7215_0033;Name=HMPREF7215_0033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0033;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000071.1 Genbank CDS 1 267 . - 0 ID=cds-EFB90614.1;Parent=gene-HMPREF7215_0033;Dbxref=NCBI_GP:EFB90614.1;Name=EFB90614.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02844;gbkey=CDS;locus_tag=HMPREF7215_0033;partial=true;product=phosphoribosylamine--glycine ligase domain protein;protein_id=EFB90614.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 271 1791 . - . ID=gene-HMPREF7215_0034;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0034 GCA_000177335.1|ADFP01000071.1 Genbank CDS 271 1791 . - 0 ID=cds-EFB90615.1;Parent=gene-HMPREF7215_0034;Dbxref=NCBI_GP:EFB90615.1;Name=EFB90615.1;Note=identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355;gbkey=CDS;gene=purH;locus_tag=HMPREF7215_0034;product=phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=EFB90615.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 1803 2372 . - . ID=gene-HMPREF7215_0035;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=HMPREF7215_0035 GCA_000177335.1|ADFP01000071.1 Genbank CDS 1803 2372 . - 0 ID=cds-EFB90616.1;Parent=gene-HMPREF7215_0035;Dbxref=NCBI_GP:EFB90616.1;Name=EFB90616.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639;gbkey=CDS;gene=purN;locus_tag=HMPREF7215_0035;product=phosphoribosylglycinamide formyltransferase;protein_id=EFB90616.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 2369 3364 . - . ID=gene-HMPREF7215_0036;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=HMPREF7215_0036 GCA_000177335.1|ADFP01000071.1 Genbank CDS 2369 3364 . - 0 ID=cds-EFB90617.1;Parent=gene-HMPREF7215_0036;Dbxref=NCBI_GP:EFB90617.1;Name=EFB90617.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878;gbkey=CDS;gene=purM;locus_tag=HMPREF7215_0036;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=EFB90617.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 3429 3563 . - . ID=gene-HMPREF7215_0037;Name=HMPREF7215_0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0037 GCA_000177335.1|ADFP01000071.1 Genbank CDS 3429 3563 . - 0 ID=cds-EFB90618.1;Parent=gene-HMPREF7215_0037;Dbxref=NCBI_GP:EFB90618.1;Name=EFB90618.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0037;product=hypothetical protein;protein_id=EFB90618.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 3515 5638 . - . ID=gene-HMPREF7215_0038;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=HMPREF7215_0038 GCA_000177335.1|ADFP01000071.1 Genbank CDS 3515 5638 . - 0 ID=cds-EFB90619.1;Parent=gene-HMPREF7215_0038;Dbxref=NCBI_GP:EFB90619.1;Name=EFB90619.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01736;gbkey=CDS;gene=purL;locus_tag=HMPREF7215_0038;product=phosphoribosylformylglycinamidine synthase II;protein_id=EFB90619.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 5635 6342 . - . ID=gene-HMPREF7215_0039;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0039 GCA_000177335.1|ADFP01000071.1 Genbank CDS 5635 6342 . - 0 ID=cds-EFB90620.1;Parent=gene-HMPREF7215_0039;Dbxref=NCBI_GP:EFB90620.1;Name=EFB90620.1;Note=identified by match to protein family HMM PF07685%3B match to protein family HMM TIGR01737;gbkey=CDS;gene=purQ;locus_tag=HMPREF7215_0039;product=phosphoribosylformylglycinamidine synthase I;protein_id=EFB90620.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 6339 6596 . - . ID=gene-HMPREF7215_0040;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0040 GCA_000177335.1|ADFP01000071.1 Genbank CDS 6339 6596 . - 0 ID=cds-EFB90621.1;Parent=gene-HMPREF7215_0040;Dbxref=NCBI_GP:EFB90621.1;Name=EFB90621.1;Note=identified by match to protein family HMM PF02700%3B match to protein family HMM TIGR00302;gbkey=CDS;gene=purS;locus_tag=HMPREF7215_0040;product=phosphoribosylformylglycinamidine synthase%2C purS protein;protein_id=EFB90621.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 6761 6964 . - . ID=gene-HMPREF7215_0041;Name=HMPREF7215_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0041 GCA_000177335.1|ADFP01000071.1 Genbank CDS 6761 6964 . - 0 ID=cds-EFB90622.1;Parent=gene-HMPREF7215_0041;Dbxref=NCBI_GP:EFB90622.1;Name=EFB90622.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0041;product=hypothetical protein;protein_id=EFB90622.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 7057 8877 . + . ID=gene-HMPREF7215_0042;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0042 GCA_000177335.1|ADFP01000071.1 Genbank CDS 7057 8877 . + 0 ID=cds-EFB90623.1;Parent=gene-HMPREF7215_0042;Dbxref=NCBI_GP:EFB90623.1;Name=EFB90623.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393;gbkey=CDS;gene=lepA;locus_tag=HMPREF7215_0042;product=GTP-binding protein LepA;protein_id=EFB90623.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 8867 9997 . + . ID=gene-HMPREF7215_0043;Name=HMPREF7215_0043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0043 GCA_000177335.1|ADFP01000071.1 Genbank CDS 8867 9997 . + 0 ID=cds-EFB90624.1;Parent=gene-HMPREF7215_0043;Dbxref=NCBI_GP:EFB90624.1;Name=EFB90624.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539;gbkey=CDS;locus_tag=HMPREF7215_0043;product=putative oxygen-independent coproporphyrinogen III oxidase;protein_id=EFB90624.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 10011 11906 . + . ID=gene-HMPREF7215_0044;Name=HMPREF7215_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0044 GCA_000177335.1|ADFP01000071.1 Genbank CDS 10011 11906 . + 0 ID=cds-EFB90625.1;Parent=gene-HMPREF7215_0044;Dbxref=NCBI_GP:EFB90625.1;Name=EFB90625.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF08497;gbkey=CDS;locus_tag=HMPREF7215_0044;product=putative radical SAM protein YgiQ;protein_id=EFB90625.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 11875 12825 . + . ID=gene-HMPREF7215_0045;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0045 GCA_000177335.1|ADFP01000071.1 Genbank CDS 11875 12825 . + 0 ID=cds-EFB90626.1;Parent=gene-HMPREF7215_0045;Dbxref=NCBI_GP:EFB90626.1;Name=EFB90626.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;locus_tag=HMPREF7215_0045;product=UDP-N-acetylmuramate dehydrogenase;protein_id=EFB90626.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 12892 13491 . - . ID=gene-HMPREF7215_0046;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0046 GCA_000177335.1|ADFP01000071.1 Genbank CDS 12892 13491 . - 0 ID=cds-EFB90627.1;Parent=gene-HMPREF7215_0046;Dbxref=NCBI_GP:EFB90627.1;Name=EFB90627.1;Note=identified by match to protein family HMM TIGR03527;gbkey=CDS;gene=yedF;locus_tag=HMPREF7215_0046;product=selenium metabolism protein YedF;protein_id=EFB90627.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 13645 15030 . + . ID=gene-HMPREF7215_0047;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0047 GCA_000177335.1|ADFP01000071.1 Genbank CDS 13645 15030 . + 0 ID=cds-EFB90628.1;Parent=gene-HMPREF7215_0047;Dbxref=NCBI_GP:EFB90628.1;Name=EFB90628.1;Note=identified by match to protein family HMM PF01053%3B match to protein family HMM PF03841%3B match to protein family HMM TIGR00474;gbkey=CDS;gene=selA;locus_tag=HMPREF7215_0047;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=EFB90628.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 15027 16946 . + . ID=gene-HMPREF7215_0048;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0048 GCA_000177335.1|ADFP01000071.1 Genbank CDS 15027 16946 . + 0 ID=cds-EFB90629.1;Parent=gene-HMPREF7215_0048;Dbxref=NCBI_GP:EFB90629.1;Name=EFB90629.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM PF09107%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00475;gbkey=CDS;gene=selB;locus_tag=HMPREF7215_0048;product=selenocysteine-specific translation elongation factor;protein_id=EFB90629.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 17042 17878 . + . ID=gene-HMPREF7215_0049;Name=HMPREF7215_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0049 GCA_000177335.1|ADFP01000071.1 Genbank CDS 17042 17878 . + 0 ID=cds-EFB90630.1;Parent=gene-HMPREF7215_0049;Dbxref=NCBI_GP:EFB90630.1;Name=EFB90630.1;Note=identified by match to protein family HMM PF00288;gbkey=CDS;locus_tag=HMPREF7215_0049;product=putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=EFB90630.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 17910 18698 . + . ID=gene-HMPREF7215_0050;Name=HMPREF7215_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0050 GCA_000177335.1|ADFP01000071.1 Genbank CDS 17910 18698 . + 0 ID=cds-EFB90631.1;Parent=gene-HMPREF7215_0050;Dbxref=NCBI_GP:EFB90631.1;Name=EFB90631.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;locus_tag=HMPREF7215_0050;product=putative pur operon repressor PurR;protein_id=EFB90631.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 18773 18952 . + . ID=gene-HMPREF7215_0051;Name=HMPREF7215_0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0051 GCA_000177335.1|ADFP01000071.1 Genbank CDS 18773 18952 . + 0 ID=cds-EFB90632.1;Parent=gene-HMPREF7215_0051;Dbxref=NCBI_GP:EFB90632.1;Name=EFB90632.1;gbkey=CDS;locus_tag=HMPREF7215_0051;product=putative ferredoxin;protein_id=EFB90632.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 18985 19059 . + . ID=gene-HMPREF7215_0052;Name=HMPREF7215_0052;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0052 GCA_000177335.1|ADFP01000071.1 Genbank tRNA 18985 19059 . + . ID=rna-HMPREF7215_0052;Parent=gene-HMPREF7215_0052;gbkey=tRNA;locus_tag=HMPREF7215_0052;product=tRNA-Met GCA_000177335.1|ADFP01000071.1 Genbank exon 18985 19059 . + . ID=exon-HMPREF7215_0052-1;Parent=rna-HMPREF7215_0052;gbkey=tRNA;locus_tag=HMPREF7215_0052;product=tRNA-Met GCA_000177335.1|ADFP01000071.1 Genbank gene 19213 20784 . + . ID=gene-HMPREF7215_0053;Name=HMPREF7215_0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0053 GCA_000177335.1|ADFP01000071.1 Genbank CDS 19213 20784 . + 0 ID=cds-EFB90633.1;Parent=gene-HMPREF7215_0053;Dbxref=NCBI_GP:EFB90633.1;Name=EFB90633.1;Note=identified by match to protein family HMM PF07556;gbkey=CDS;locus_tag=HMPREF7215_0053;product=hypothetical protein;protein_id=EFB90633.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 20777 21487 . + . ID=gene-HMPREF7215_0054;Name=HMPREF7215_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0054 GCA_000177335.1|ADFP01000071.1 Genbank CDS 20777 21487 . + 0 ID=cds-EFB90634.1;Parent=gene-HMPREF7215_0054;Dbxref=NCBI_GP:EFB90634.1;Name=EFB90634.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0054;product=hypothetical protein;protein_id=EFB90634.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 21687 21761 . - . ID=gene-HMPREF7215_0055;Name=HMPREF7215_0055;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0055 GCA_000177335.1|ADFP01000071.1 Genbank tRNA 21687 21761 . - . ID=rna-HMPREF7215_0055;Parent=gene-HMPREF7215_0055;gbkey=tRNA;locus_tag=HMPREF7215_0055;product=tRNA-Val GCA_000177335.1|ADFP01000071.1 Genbank exon 21687 21761 . - . ID=exon-HMPREF7215_0055-1;Parent=rna-HMPREF7215_0055;gbkey=tRNA;locus_tag=HMPREF7215_0055;product=tRNA-Val GCA_000177335.1|ADFP01000071.1 Genbank gene 21939 22370 . + . ID=gene-HMPREF7215_0056;Name=HMPREF7215_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0056 GCA_000177335.1|ADFP01000071.1 Genbank CDS 21939 22370 . + 0 ID=cds-EFB90635.1;Parent=gene-HMPREF7215_0056;Dbxref=NCBI_GP:EFB90635.1;Name=EFB90635.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0056;product=hypothetical protein;protein_id=EFB90635.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 22492 24150 . + . ID=gene-HMPREF7215_0057;Name=HMPREF7215_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0057 GCA_000177335.1|ADFP01000071.1 Genbank CDS 22492 24150 . + 0 ID=cds-EFB90636.1;Parent=gene-HMPREF7215_0057;Dbxref=NCBI_GP:EFB90636.1;Name=EFB90636.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;locus_tag=HMPREF7215_0057;product=carbon starvation protein CstA;protein_id=EFB90636.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 24683 25309 . + . ID=gene-HMPREF7215_0058;Name=HMPREF7215_0058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0058 GCA_000177335.1|ADFP01000071.1 Genbank CDS 24683 25309 . + 0 ID=cds-EFB90637.1;Parent=gene-HMPREF7215_0058;Dbxref=NCBI_GP:EFB90637.1;Name=EFB90637.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_0058;product=FCD domain protein;protein_id=EFB90637.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 25409 26413 . + . ID=gene-HMPREF7215_0059;Name=acoA;gbkey=Gene;gene=acoA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0059 GCA_000177335.1|ADFP01000071.1 Genbank CDS 25409 26413 . + 0 ID=cds-EFB90638.1;Parent=gene-HMPREF7215_0059;Dbxref=NCBI_GP:EFB90638.1;Name=EFB90638.1;Note=identified by match to protein family HMM PF00676;gbkey=CDS;gene=acoA;locus_tag=HMPREF7215_0059;product=TPP-dependent acetoin dehydrogenase complex%2C E1 component%2C alpha subunit;protein_id=EFB90638.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 26423 26947 . - . ID=gene-HMPREF7215_0060;Name=HMPREF7215_0060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0060 GCA_000177335.1|ADFP01000071.1 Genbank CDS 26423 26947 . - 0 ID=cds-EFB90639.1;Parent=gene-HMPREF7215_0060;Dbxref=NCBI_GP:EFB90639.1;Name=EFB90639.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0060;product=hypothetical protein;protein_id=EFB90639.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 26429 27406 . + . ID=gene-HMPREF7215_0061;Name=HMPREF7215_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0061 GCA_000177335.1|ADFP01000071.1 Genbank CDS 26429 27406 . + 0 ID=cds-EFB90640.1;Parent=gene-HMPREF7215_0061;Dbxref=NCBI_GP:EFB90640.1;Name=EFB90640.1;gbkey=CDS;locus_tag=HMPREF7215_0061;product=Transketolase%2C pyridine binding domain protein;protein_id=EFB90640.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 27568 28638 . + . ID=gene-HMPREF7215_0062;Name=HMPREF7215_0062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0062 GCA_000177335.1|ADFP01000071.1 Genbank CDS 27568 28638 . + 0 ID=cds-EFB90641.1;Parent=gene-HMPREF7215_0062;Dbxref=NCBI_GP:EFB90641.1;Name=EFB90641.1;Note=identified by match to protein family HMM PF03480%3B match to protein family HMM TIGR00787;gbkey=CDS;locus_tag=HMPREF7215_0062;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB90641.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 28760 29230 . + . ID=gene-HMPREF7215_0063;Name=HMPREF7215_0063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0063 GCA_000177335.1|ADFP01000071.1 Genbank CDS 28760 29230 . + 0 ID=cds-EFB90642.1;Parent=gene-HMPREF7215_0063;Dbxref=NCBI_GP:EFB90642.1;Name=EFB90642.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04290;gbkey=CDS;locus_tag=HMPREF7215_0063;product=TRAP transporter%2C DctQ-like membrane protein;protein_id=EFB90642.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 29247 30545 . + . ID=gene-HMPREF7215_0064;Name=HMPREF7215_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0064 GCA_000177335.1|ADFP01000071.1 Genbank CDS 29247 30545 . + 0 ID=cds-EFB90643.1;Parent=gene-HMPREF7215_0064;Dbxref=NCBI_GP:EFB90643.1;Name=EFB90643.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_0064;product=TRAP transporter%2C DctM subunit;protein_id=EFB90643.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 30722 32176 . + . ID=gene-HMPREF7215_0065;Name=HMPREF7215_0065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0065 GCA_000177335.1|ADFP01000071.1 Genbank CDS 30722 32176 . + 0 ID=cds-EFB90644.1;Parent=gene-HMPREF7215_0065;Dbxref=NCBI_GP:EFB90644.1;Name=EFB90644.1;Note=identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817;gbkey=CDS;locus_tag=HMPREF7215_0065;product=putative pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;protein_id=EFB90644.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 32254 33975 . + . ID=gene-HMPREF7215_0066;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0066 GCA_000177335.1|ADFP01000071.1 Genbank CDS 32254 33975 . + 0 ID=cds-EFB90645.1;Parent=gene-HMPREF7215_0066;Dbxref=NCBI_GP:EFB90645.1;Name=EFB90645.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF00364%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350;gbkey=CDS;gene=lpdA;locus_tag=HMPREF7215_0066;product=dihydrolipoyl dehydrogenase;protein_id=EFB90645.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 34326 35324 . + . ID=gene-HMPREF7215_0067;Name=HMPREF7215_0067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0067 GCA_000177335.1|ADFP01000071.1 Genbank CDS 34326 35324 . + 0 ID=cds-EFB90646.1;Parent=gene-HMPREF7215_0067;Dbxref=NCBI_GP:EFB90646.1;Name=EFB90646.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545;gbkey=CDS;locus_tag=HMPREF7215_0067;product=lipoyltransferase and lipoate-protein ligase;protein_id=EFB90646.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 35350 35928 . - . ID=gene-HMPREF7215_0068;Name=HMPREF7215_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0068 GCA_000177335.1|ADFP01000071.1 Genbank CDS 35350 35928 . - 0 ID=cds-EFB90647.1;Parent=gene-HMPREF7215_0068;Dbxref=NCBI_GP:EFB90647.1;Name=EFB90647.1;Note=identified by match to protein family HMM PF00657;gbkey=CDS;locus_tag=HMPREF7215_0068;product=GDSL-like protein;protein_id=EFB90647.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 36524 37459 . + . ID=gene-HMPREF7215_0069;Name=HMPREF7215_0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0069 GCA_000177335.1|ADFP01000071.1 Genbank CDS 36524 37459 . + 0 ID=cds-EFB90648.1;Parent=gene-HMPREF7215_0069;Dbxref=NCBI_GP:EFB90648.1;Name=EFB90648.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;locus_tag=HMPREF7215_0069;product=hexose kinase%2C 1-phosphofructokinase family;protein_id=EFB90648.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 37580 38704 . + . ID=gene-HMPREF7215_0070;Name=HMPREF7215_0070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0070 GCA_000177335.1|ADFP01000071.1 Genbank CDS 37580 38704 . + 0 ID=cds-EFB90649.1;Parent=gene-HMPREF7215_0070;Dbxref=NCBI_GP:EFB90649.1;Name=EFB90649.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;locus_tag=HMPREF7215_0070;product=peptidase%2C M48 family;protein_id=EFB90649.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 38778 40700 . + . ID=gene-HMPREF7215_0071;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0071 GCA_000177335.1|ADFP01000071.1 Genbank CDS 38778 40700 . + 0 ID=cds-EFB90650.1;Parent=gene-HMPREF7215_0071;Dbxref=NCBI_GP:EFB90650.1;Name=EFB90650.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397;gbkey=CDS;gene=dnaX;locus_tag=HMPREF7215_0071;product=DNA polymerase III%2C subunit gamma and tau;protein_id=EFB90650.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 40755 44222 . + . ID=gene-HMPREF7215_0072;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0072 GCA_000177335.1|ADFP01000071.1 Genbank CDS 40755 44222 . + 0 ID=cds-EFB90651.1;Parent=gene-HMPREF7215_0072;Dbxref=NCBI_GP:EFB90651.1;Name=EFB90651.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;gene=dnaE;locus_tag=HMPREF7215_0072;product=DNA polymerase III%2C alpha subunit;protein_id=EFB90651.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 44212 45981 . + . ID=gene-HMPREF7215_0073;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=HMPREF7215_0073 GCA_000177335.1|ADFP01000071.1 Genbank CDS 44212 45981 . + 0 ID=cds-EFB90652.1;Parent=gene-HMPREF7215_0073;Dbxref=NCBI_GP:EFB90652.1;Name=EFB90652.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk;locus_tag=HMPREF7215_0073;product=pyruvate kinase;protein_id=EFB90652.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 46083 46910 . + . ID=gene-HMPREF7215_0074;Name=HMPREF7215_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0074 GCA_000177335.1|ADFP01000071.1 Genbank CDS 46083 46910 . + 0 ID=cds-EFB90653.1;Parent=gene-HMPREF7215_0074;Dbxref=NCBI_GP:EFB90653.1;Name=EFB90653.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159;gbkey=CDS;locus_tag=HMPREF7215_0074;product=TIGR00159 family protein;protein_id=EFB90653.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 46921 48138 . + . ID=gene-HMPREF7215_0075;Name=HMPREF7215_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0075 GCA_000177335.1|ADFP01000071.1 Genbank CDS 46921 48138 . + 0 ID=cds-EFB90654.1;Parent=gene-HMPREF7215_0075;Dbxref=NCBI_GP:EFB90654.1;Name=EFB90654.1;Note=identified by match to protein family HMM PF07949;gbkey=CDS;locus_tag=HMPREF7215_0075;product=YbbR-like protein;protein_id=EFB90654.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 48163 49533 . + . ID=gene-HMPREF7215_0076;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF7215_0076 GCA_000177335.1|ADFP01000071.1 Genbank CDS 48163 49533 . + 0 ID=cds-EFB90655.1;Parent=gene-HMPREF7215_0076;Dbxref=NCBI_GP:EFB90655.1;Name=EFB90655.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455;gbkey=CDS;gene=glmM;locus_tag=HMPREF7215_0076;product=phosphoglucosamine mutase;protein_id=EFB90655.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 49622 49795 . + . ID=gene-HMPREF7215_0077;Name=HMPREF7215_0077;gbkey=Gene;gene_biotype=ribozyme;locus_tag=HMPREF7215_0077 GCA_000177335.1|ADFP01000071.1 Genbank ribozyme 49622 49795 . + . ID=rna-HMPREF7215_0077;Parent=gene-HMPREF7215_0077;gbkey=ncRNA;locus_tag=HMPREF7215_0077;product=putative glmS glucosamine-6-phosphate activated ribozyme GCA_000177335.1|ADFP01000071.1 Genbank exon 49622 49795 . + . ID=exon-HMPREF7215_0077-1;Parent=rna-HMPREF7215_0077;gbkey=ncRNA;locus_tag=HMPREF7215_0077;product=putative glmS glucosamine-6-phosphate activated ribozyme GCA_000177335.1|ADFP01000071.1 Genbank gene 49814 51637 . + . ID=gene-HMPREF7215_0078;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0078 GCA_000177335.1|ADFP01000071.1 Genbank CDS 49814 51637 . + 0 ID=cds-EFB90656.1;Parent=gene-HMPREF7215_0078;Dbxref=NCBI_GP:EFB90656.1;Name=EFB90656.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;locus_tag=HMPREF7215_0078;product=glutamine-fructose-6-phosphate transaminase (isomerizing);protein_id=EFB90656.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 51776 52177 . + . ID=gene-HMPREF7215_0079;Name=HMPREF7215_0079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0079 GCA_000177335.1|ADFP01000071.1 Genbank CDS 51776 52177 . + 0 ID=cds-EFB90657.1;Parent=gene-HMPREF7215_0079;Dbxref=NCBI_GP:EFB90657.1;Name=EFB90657.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0079;product=hypothetical protein;protein_id=EFB90657.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 52323 52889 . - . ID=gene-HMPREF7215_0080;Name=HMPREF7215_0080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0080 GCA_000177335.1|ADFP01000071.1 Genbank CDS 52323 52889 . - 0 ID=cds-EFB90658.1;Parent=gene-HMPREF7215_0080;Dbxref=NCBI_GP:EFB90658.1;Name=EFB90658.1;Note=identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_0080;product=chromate transport protein;protein_id=EFB90658.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 52886 53473 . - . ID=gene-HMPREF7215_0081;Name=HMPREF7215_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0081 GCA_000177335.1|ADFP01000071.1 Genbank CDS 52886 53473 . - 0 ID=cds-EFB90659.1;Parent=gene-HMPREF7215_0081;Dbxref=NCBI_GP:EFB90659.1;Name=EFB90659.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02417;gbkey=CDS;locus_tag=HMPREF7215_0081;product=chromate transport protein;protein_id=EFB90659.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 53458 53598 . - . ID=gene-HMPREF7215_0082;Name=HMPREF7215_0082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0082 GCA_000177335.1|ADFP01000071.1 Genbank CDS 53458 53598 . - 0 ID=cds-EFB90660.1;Parent=gene-HMPREF7215_0082;Dbxref=NCBI_GP:EFB90660.1;Name=EFB90660.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0082;product=hypothetical protein;protein_id=EFB90660.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 53764 54801 . + . ID=gene-HMPREF7215_0083;Name=fabHA;gbkey=Gene;gene=fabHA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0083 GCA_000177335.1|ADFP01000071.1 Genbank CDS 53764 54801 . + 0 ID=cds-EFB90661.1;Parent=gene-HMPREF7215_0083;Dbxref=NCBI_GP:EFB90661.1;Name=EFB90661.1;Note=identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545;gbkey=CDS;gene=fabHA;locus_tag=HMPREF7215_0083;product=beta-ketoacyl-acyl-carrier-protein synthase III;protein_id=EFB90661.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 54871 55032 . + . ID=gene-HMPREF7215_0084;Name=HMPREF7215_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0084 GCA_000177335.1|ADFP01000071.1 Genbank CDS 54871 55032 . + 0 ID=cds-EFB90662.1;Parent=gene-HMPREF7215_0084;Dbxref=NCBI_GP:EFB90662.1;Name=EFB90662.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0084;product=hypothetical protein;protein_id=EFB90662.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 55159 55287 . + . ID=gene-HMPREF7215_0085;Name=HMPREF7215_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0085 GCA_000177335.1|ADFP01000071.1 Genbank CDS 55159 55287 . + 0 ID=cds-EFB90663.1;Parent=gene-HMPREF7215_0085;Dbxref=NCBI_GP:EFB90663.1;Name=EFB90663.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0085;product=hypothetical protein;protein_id=EFB90663.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 55365 56525 . + . ID=gene-HMPREF7215_0086;Name=gcdB;gbkey=Gene;gene=gcdB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0086 GCA_000177335.1|ADFP01000071.1 Genbank CDS 55365 56525 . + 0 ID=cds-EFB90664.1;Parent=gene-HMPREF7215_0086;Dbxref=NCBI_GP:EFB90664.1;Name=EFB90664.1;Note=identified by match to protein family HMM PF03977%3B match to protein family HMM TIGR01109;gbkey=CDS;gene=gcdB;locus_tag=HMPREF7215_0086;product=glutaconyl-CoA decarboxylase subunit beta;protein_id=EFB90664.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 56740 56859 . - . ID=gene-HMPREF7215_0087;Name=HMPREF7215_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0087 GCA_000177335.1|ADFP01000071.1 Genbank CDS 56740 56859 . - 0 ID=cds-EFB90665.1;Parent=gene-HMPREF7215_0087;Dbxref=NCBI_GP:EFB90665.1;Name=EFB90665.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0087;product=hypothetical protein;protein_id=EFB90665.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 56952 57281 . + . ID=gene-HMPREF7215_0088;Name=HMPREF7215_0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0088 GCA_000177335.1|ADFP01000071.1 Genbank CDS 56952 57281 . + 0 ID=cds-EFB90666.1;Parent=gene-HMPREF7215_0088;Dbxref=NCBI_GP:EFB90666.1;Name=EFB90666.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0088;product=hypothetical protein;protein_id=EFB90666.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 57281 57937 . + . ID=gene-HMPREF7215_0089;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0089 GCA_000177335.1|ADFP01000071.1 Genbank CDS 57281 57937 . + 0 ID=cds-EFB90667.1;Parent=gene-HMPREF7215_0089;Dbxref=NCBI_GP:EFB90667.1;Name=EFB90667.1;Note=identified by match to protein family HMM PF00075%3B match to protein family HMM PF04434;gbkey=CDS;gene=rnhA;locus_tag=HMPREF7215_0089;product=ribonuclease HI;protein_id=EFB90667.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 57988 58104 . - . ID=gene-HMPREF7215_0090;Name=HMPREF7215_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0090 GCA_000177335.1|ADFP01000071.1 Genbank CDS 57988 58104 . - 0 ID=cds-EFB90668.1;Parent=gene-HMPREF7215_0090;Dbxref=NCBI_GP:EFB90668.1;Name=EFB90668.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0090;product=hypothetical protein;protein_id=EFB90668.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 58124 58267 . - . ID=gene-HMPREF7215_0091;Name=HMPREF7215_0091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0091 GCA_000177335.1|ADFP01000071.1 Genbank CDS 58124 58267 . - 0 ID=cds-EFB90669.1;Parent=gene-HMPREF7215_0091;Dbxref=NCBI_GP:EFB90669.1;Name=EFB90669.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0091;product=hypothetical protein;protein_id=EFB90669.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 58295 59494 . + . ID=gene-HMPREF7215_0092;Name=HMPREF7215_0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0092 GCA_000177335.1|ADFP01000071.1 Genbank CDS 58295 59494 . + 0 ID=cds-EFB90670.1;Parent=gene-HMPREF7215_0092;Dbxref=NCBI_GP:EFB90670.1;Name=EFB90670.1;gbkey=CDS;locus_tag=HMPREF7215_0092;product=putative sugar diacid recognition;protein_id=EFB90670.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 59649 61256 . - . ID=gene-HMPREF7215_0093;Name=HMPREF7215_0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0093 GCA_000177335.1|ADFP01000071.1 Genbank CDS 59649 61256 . - 0 ID=cds-EFB90671.1;Parent=gene-HMPREF7215_0093;Dbxref=NCBI_GP:EFB90671.1;Name=EFB90671.1;Note=identified by match to protein family HMM PF01019;gbkey=CDS;locus_tag=HMPREF7215_0093;product=putative gamma-glutamyltransferase;protein_id=EFB90671.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 61278 61547 . + . ID=gene-HMPREF7215_0095;Name=HMPREF7215_0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0095 GCA_000177335.1|ADFP01000071.1 Genbank CDS 61278 61547 . + 0 ID=cds-EFB90672.1;Parent=gene-HMPREF7215_0095;Dbxref=NCBI_GP:EFB90672.1;Name=EFB90672.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0095;product=hypothetical protein;protein_id=EFB90672.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 61519 61722 . - . ID=gene-HMPREF7215_0094;Name=HMPREF7215_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0094 GCA_000177335.1|ADFP01000071.1 Genbank CDS 61519 61722 . - 0 ID=cds-EFB90673.1;Parent=gene-HMPREF7215_0094;Dbxref=NCBI_GP:EFB90673.1;Name=EFB90673.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0094;product=hypothetical protein;protein_id=EFB90673.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 61911 62396 . - . ID=gene-HMPREF7215_0096;Name=HMPREF7215_0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0096 GCA_000177335.1|ADFP01000071.1 Genbank CDS 61911 62396 . - 0 ID=cds-EFB90674.1;Parent=gene-HMPREF7215_0096;Dbxref=NCBI_GP:EFB90674.1;Name=EFB90674.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;locus_tag=HMPREF7215_0096;product=YbaK/proline--tRNA ligase associated domain protein;protein_id=EFB90674.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 62407 63789 . - . ID=gene-HMPREF7215_0097;Name=HMPREF7215_0097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0097 GCA_000177335.1|ADFP01000071.1 Genbank CDS 62407 63789 . - 0 ID=cds-EFB90675.1;Parent=gene-HMPREF7215_0097;Dbxref=NCBI_GP:EFB90675.1;Name=EFB90675.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880;gbkey=CDS;locus_tag=HMPREF7215_0097;product=phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;protein_id=EFB90675.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 63879 64112 . + . ID=gene-HMPREF7215_0098;Name=HMPREF7215_0098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0098 GCA_000177335.1|ADFP01000071.1 Genbank CDS 63879 64112 . + 0 ID=cds-EFB90676.1;Parent=gene-HMPREF7215_0098;Dbxref=NCBI_GP:EFB90676.1;Name=EFB90676.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0098;product=hypothetical protein;protein_id=EFB90676.1;transl_table=11 GCA_000177335.1|ADFP01000071.1 Genbank gene 64225 64719 . + . ID=gene-HMPREF7215_0099;Name=HMPREF7215_0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0099 GCA_000177335.1|ADFP01000071.1 Genbank CDS 64225 64719 . + 0 ID=cds-EFB90677.1;Parent=gene-HMPREF7215_0099;Dbxref=NCBI_GP:EFB90677.1;Name=EFB90677.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0099;product=hypothetical protein;protein_id=EFB90677.1;transl_table=11 ##sequence-region ADFP01000070.1 1 2763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000070.1 Genbank region 1 2763 . + . ID=ADFP01000070.1:1..2763;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000070.1 Genbank gene 1 493 . + . ID=gene-HMPREF7215_1482;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF7215_1482;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000070.1 Genbank CDS 1 493 . + 1 ID=cds-EFB90678.1;Parent=gene-HMPREF7215_1482;Dbxref=NCBI_GP:EFB90678.1;Name=EFB90678.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=HMPREF7215_1482;partial=true;product=shikimate kinase;protein_id=EFB90678.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000070.1 Genbank gene 490 924 . + . ID=gene-HMPREF7215_1483;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_1483 GCA_000177335.1|ADFP01000070.1 Genbank CDS 490 924 . + 0 ID=cds-EFB90679.1;Parent=gene-HMPREF7215_1483;Dbxref=NCBI_GP:EFB90679.1;Name=EFB90679.1;Note=identified by match to protein family HMM PF01220%3B match to protein family HMM TIGR01088;gbkey=CDS;gene=aroQ;locus_tag=HMPREF7215_1483;product=3-dehydroquinate dehydratase%2C type II;protein_id=EFB90679.1;transl_table=11 GCA_000177335.1|ADFP01000070.1 Genbank gene 1248 2003 . + . ID=gene-HMPREF7215_1484;Name=HMPREF7215_1484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1484 GCA_000177335.1|ADFP01000070.1 Genbank CDS 1248 2003 . + 0 ID=cds-EFB90680.1;Parent=gene-HMPREF7215_1484;Dbxref=NCBI_GP:EFB90680.1;Name=EFB90680.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;locus_tag=HMPREF7215_1484;product=putative nitrogenase iron protein;protein_id=EFB90680.1;transl_table=11 GCA_000177335.1|ADFP01000070.1 Genbank gene 2000 2763 . + . ID=gene-HMPREF7215_1485;Name=HMPREF7215_1485;end_range=2763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1485;partial=true GCA_000177335.1|ADFP01000070.1 Genbank CDS 2000 2763 . + 0 ID=cds-EFB90681.1;Parent=gene-HMPREF7215_1485;Dbxref=NCBI_GP:EFB90681.1;Name=EFB90681.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=2763,.;gbkey=CDS;locus_tag=HMPREF7215_1485;partial=true;product=hypothetical protein;protein_id=EFB90681.1;transl_table=11 ##sequence-region ADFP01000069.1 1 36608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000069.1 Genbank region 1 36608 . + . ID=ADFP01000069.1:1..36608;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000069.1 Genbank gene 87 1130 . - . ID=gene-HMPREF7215_0550;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0550 GCA_000177335.1|ADFP01000069.1 Genbank CDS 87 1130 . - 0 ID=cds-EFB90682.1;Parent=gene-HMPREF7215_0550;Dbxref=NCBI_GP:EFB90682.1;Name=EFB90682.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612;gbkey=CDS;gene=ispG;locus_tag=HMPREF7215_0550;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=EFB90682.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 1145 2179 . - . ID=gene-HMPREF7215_0551;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=HMPREF7215_0551 GCA_000177335.1|ADFP01000069.1 Genbank CDS 1145 2179 . - 0 ID=cds-EFB90683.1;Parent=gene-HMPREF7215_0551;Dbxref=NCBI_GP:EFB90683.1;Name=EFB90683.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=rseP;locus_tag=HMPREF7215_0551;product=RIP metalloprotease RseP;protein_id=EFB90683.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 2180 3355 . - . ID=gene-HMPREF7215_0552;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=HMPREF7215_0552 GCA_000177335.1|ADFP01000069.1 Genbank CDS 2180 3355 . - 0 ID=cds-EFB90684.1;Parent=gene-HMPREF7215_0552;Dbxref=NCBI_GP:EFB90684.1;Name=EFB90684.1;Note=identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243;gbkey=CDS;gene=dxr;locus_tag=HMPREF7215_0552;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=EFB90684.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 3366 4193 . - . ID=gene-HMPREF7215_0553;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0553 GCA_000177335.1|ADFP01000069.1 Genbank CDS 3366 4193 . - 0 ID=cds-EFB90685.1;Parent=gene-HMPREF7215_0553;Dbxref=NCBI_GP:EFB90685.1;Name=EFB90685.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA;locus_tag=HMPREF7215_0553;product=phosphatidate cytidylyltransferase;protein_id=EFB90685.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 4171 4872 . - . ID=gene-HMPREF7215_0554;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0554 GCA_000177335.1|ADFP01000069.1 Genbank CDS 4171 4872 . - 0 ID=cds-EFB90686.1;Parent=gene-HMPREF7215_0554;Dbxref=NCBI_GP:EFB90686.1;Name=EFB90686.1;Note=identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;locus_tag=HMPREF7215_0554;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=EFB90686.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 4876 5493 . - . ID=gene-HMPREF7215_0555;Name=HMPREF7215_0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0555 GCA_000177335.1|ADFP01000069.1 Genbank CDS 4876 5493 . - 0 ID=cds-EFB90687.1;Parent=gene-HMPREF7215_0555;Dbxref=NCBI_GP:EFB90687.1;Name=EFB90687.1;Note=identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00758;gbkey=CDS;locus_tag=HMPREF7215_0555;product=uracil-DNA glycosylase A;protein_id=EFB90687.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 5486 6331 . - . ID=gene-HMPREF7215_0556;Name=HMPREF7215_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0556 GCA_000177335.1|ADFP01000069.1 Genbank CDS 5486 6331 . - 0 ID=cds-EFB90688.1;Parent=gene-HMPREF7215_0556;Dbxref=NCBI_GP:EFB90688.1;Name=EFB90688.1;gbkey=CDS;locus_tag=HMPREF7215_0556;product=hypothetical protein;protein_id=EFB90688.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 6364 7656 . - . ID=gene-HMPREF7215_0557;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0557 GCA_000177335.1|ADFP01000069.1 Genbank CDS 6364 7656 . - 0 ID=cds-EFB90689.1;Parent=gene-HMPREF7215_0557;Dbxref=NCBI_GP:EFB90689.1;Name=EFB90689.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA;locus_tag=HMPREF7215_0557;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=EFB90689.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 7767 8633 . - . ID=gene-HMPREF7215_0558;Name=HMPREF7215_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0558 GCA_000177335.1|ADFP01000069.1 Genbank CDS 7767 8633 . - 0 ID=cds-EFB90690.1;Parent=gene-HMPREF7215_0558;Dbxref=NCBI_GP:EFB90690.1;Name=EFB90690.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;locus_tag=HMPREF7215_0558;product=glycosyltransferase%2C group 4 family;protein_id=EFB90690.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 8633 9730 . - . ID=gene-HMPREF7215_0559;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF7215_0559 GCA_000177335.1|ADFP01000069.1 Genbank CDS 8633 9730 . - 0 ID=cds-EFB90691.1;Parent=gene-HMPREF7215_0559;Dbxref=NCBI_GP:EFB90691.1;Name=EFB90691.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01091%3B match to protein family HMM TIGR01120;gbkey=CDS;gene=upp;locus_tag=HMPREF7215_0559;product=uracil phosphoribosyltransferase;protein_id=EFB90691.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 9871 10338 . - . ID=gene-HMPREF7215_0560;Name=gcdC;gbkey=Gene;gene=gcdC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0560 GCA_000177335.1|ADFP01000069.1 Genbank CDS 9871 10338 . - 0 ID=cds-EFB90692.1;Parent=gene-HMPREF7215_0560;Dbxref=NCBI_GP:EFB90692.1;Name=EFB90692.1;Note=identified by match to protein family HMM PF00364;gbkey=CDS;gene=gcdC;locus_tag=HMPREF7215_0560;product=glutaconyl-CoA decarboxylase subunit gamma;protein_id=EFB90692.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 10359 10775 . - . ID=gene-HMPREF7215_0561;Name=HMPREF7215_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0561 GCA_000177335.1|ADFP01000069.1 Genbank CDS 10359 10775 . - 0 ID=cds-EFB90693.1;Parent=gene-HMPREF7215_0561;Dbxref=NCBI_GP:EFB90693.1;Name=EFB90693.1;Note=identified by match to protein family HMM PF04277;gbkey=CDS;locus_tag=HMPREF7215_0561;product=sodium pump decarboxylase%2C gamma subunit;protein_id=EFB90693.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 10791 12350 . - . ID=gene-HMPREF7215_0562;Name=HMPREF7215_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0562 GCA_000177335.1|ADFP01000069.1 Genbank CDS 10791 12350 . - 0 ID=cds-EFB90694.1;Parent=gene-HMPREF7215_0562;Dbxref=NCBI_GP:EFB90694.1;Name=EFB90694.1;Note=identified by match to protein family HMM PF01039;gbkey=CDS;locus_tag=HMPREF7215_0562;product=carboxyl transferase domain protein;protein_id=EFB90694.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 12660 12890 . - . ID=gene-HMPREF7215_0563;Name=HMPREF7215_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0563 GCA_000177335.1|ADFP01000069.1 Genbank CDS 12660 12890 . - 0 ID=cds-EFB90695.1;Parent=gene-HMPREF7215_0563;Dbxref=NCBI_GP:EFB90695.1;Name=EFB90695.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0563;product=hypothetical protein;protein_id=EFB90695.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 13127 14083 . - . ID=gene-HMPREF7215_0564;Name=HMPREF7215_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0564 GCA_000177335.1|ADFP01000069.1 Genbank CDS 13127 14083 . - 0 ID=cds-EFB90696.1;Parent=gene-HMPREF7215_0564;Dbxref=NCBI_GP:EFB90696.1;Name=EFB90696.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;locus_tag=HMPREF7215_0564;product=oxidoreductase%2C NAD-binding domain protein;protein_id=EFB90696.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 14119 14868 . - . ID=gene-HMPREF7215_0565;Name=HMPREF7215_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0565 GCA_000177335.1|ADFP01000069.1 Genbank CDS 14119 14868 . - 0 ID=cds-EFB90697.1;Parent=gene-HMPREF7215_0565;Dbxref=NCBI_GP:EFB90697.1;Name=EFB90697.1;Note=identified by match to protein family HMM PF02578;gbkey=CDS;locus_tag=HMPREF7215_0565;product=conserved hypothetical protein%2C YfiH family;protein_id=EFB90697.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 14855 16159 . - . ID=gene-HMPREF7215_0566;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0566 GCA_000177335.1|ADFP01000069.1 Genbank CDS 14855 16159 . - 0 ID=cds-EFB90698.1;Parent=gene-HMPREF7215_0566;Dbxref=NCBI_GP:EFB90698.1;Name=EFB90698.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499;gbkey=CDS;gene=folC;locus_tag=HMPREF7215_0566;product=bifunctional protein FolC;protein_id=EFB90698.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 16169 18874 . - . ID=gene-HMPREF7215_0567;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0567 GCA_000177335.1|ADFP01000069.1 Genbank CDS 16169 18874 . - 0 ID=cds-EFB90699.1;Parent=gene-HMPREF7215_0567;Dbxref=NCBI_GP:EFB90699.1;Name=EFB90699.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;locus_tag=HMPREF7215_0567;product=valine--tRNA ligase;protein_id=EFB90699.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 18904 19500 . - . ID=gene-HMPREF7215_0568;Name=ysxC;gbkey=Gene;gene=ysxC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0568 GCA_000177335.1|ADFP01000069.1 Genbank CDS 18904 19500 . - 0 ID=cds-EFB90700.1;Parent=gene-HMPREF7215_0568;Dbxref=NCBI_GP:EFB90700.1;Name=EFB90700.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03598;gbkey=CDS;gene=ysxC;locus_tag=HMPREF7215_0568;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=EFB90700.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 19497 21815 . - . ID=gene-HMPREF7215_0569;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=HMPREF7215_0569 GCA_000177335.1|ADFP01000069.1 Genbank CDS 19497 21815 . - 0 ID=cds-EFB90701.1;Parent=gene-HMPREF7215_0569;Dbxref=NCBI_GP:EFB90701.1;Name=EFB90701.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon;locus_tag=HMPREF7215_0569;product=endopeptidase La;protein_id=EFB90701.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 21819 23117 . - . ID=gene-HMPREF7215_0570;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0570 GCA_000177335.1|ADFP01000069.1 Genbank CDS 21819 23117 . - 0 ID=cds-EFB90702.1;Parent=gene-HMPREF7215_0570;Dbxref=NCBI_GP:EFB90702.1;Name=EFB90702.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382;gbkey=CDS;gene=clpX;locus_tag=HMPREF7215_0570;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpX;protein_id=EFB90702.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 23200 23778 . - . ID=gene-HMPREF7215_0571;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=HMPREF7215_0571 GCA_000177335.1|ADFP01000069.1 Genbank CDS 23200 23778 . - 0 ID=cds-EFB90703.1;Parent=gene-HMPREF7215_0571;Dbxref=NCBI_GP:EFB90703.1;Name=EFB90703.1;Note=identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493;gbkey=CDS;gene=clpP;locus_tag=HMPREF7215_0571;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=EFB90703.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 23862 25214 . - . ID=gene-HMPREF7215_0572;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=HMPREF7215_0572 GCA_000177335.1|ADFP01000069.1 Genbank CDS 23862 25214 . - 0 ID=cds-EFB90704.1;Parent=gene-HMPREF7215_0572;Dbxref=NCBI_GP:EFB90704.1;Name=EFB90704.1;Note=identified by match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115;gbkey=CDS;gene=tig;locus_tag=HMPREF7215_0572;product=trigger factor;protein_id=EFB90704.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 25303 25443 . - . ID=gene-HMPREF7215_0573;Name=HMPREF7215_0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0573 GCA_000177335.1|ADFP01000069.1 Genbank CDS 25303 25443 . - 0 ID=cds-EFB90705.1;Parent=gene-HMPREF7215_0573;Dbxref=NCBI_GP:EFB90705.1;Name=EFB90705.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0573;product=hypothetical protein;protein_id=EFB90705.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 25510 27438 . - . ID=gene-HMPREF7215_0574;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0574 GCA_000177335.1|ADFP01000069.1 Genbank CDS 25510 27438 . - 0 ID=cds-EFB90706.1;Parent=gene-HMPREF7215_0574;Dbxref=NCBI_GP:EFB90706.1;Name=EFB90706.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoD;locus_tag=HMPREF7215_0574;product=RNA polymerase sigma factor RpoD;protein_id=EFB90706.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 27517 28197 . - . ID=gene-HMPREF7215_0575;Name=HMPREF7215_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0575 GCA_000177335.1|ADFP01000069.1 Genbank CDS 27517 28197 . - 0 ID=cds-EFB90707.1;Parent=gene-HMPREF7215_0575;Dbxref=NCBI_GP:EFB90707.1;Name=EFB90707.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0575;product=hypothetical protein;protein_id=EFB90707.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 28251 28460 . - . ID=gene-HMPREF7215_0576;Name=HMPREF7215_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0576 GCA_000177335.1|ADFP01000069.1 Genbank CDS 28251 28460 . - 0 ID=cds-EFB90708.1;Parent=gene-HMPREF7215_0576;Dbxref=NCBI_GP:EFB90708.1;Name=EFB90708.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0576;product=hypothetical protein;protein_id=EFB90708.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 28503 29132 . + . ID=gene-HMPREF7215_0578;Name=HMPREF7215_0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0578 GCA_000177335.1|ADFP01000069.1 Genbank CDS 28503 29132 . + 0 ID=cds-EFB90709.1;Parent=gene-HMPREF7215_0578;Dbxref=NCBI_GP:EFB90709.1;Name=EFB90709.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF7215_0578;product=SNARE-like domain protein;protein_id=EFB90709.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 29108 29245 . - . ID=gene-HMPREF7215_0577;Name=HMPREF7215_0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0577 GCA_000177335.1|ADFP01000069.1 Genbank CDS 29108 29245 . - 0 ID=cds-EFB90710.1;Parent=gene-HMPREF7215_0577;Dbxref=NCBI_GP:EFB90710.1;Name=EFB90710.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0577;product=hypothetical protein;protein_id=EFB90710.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 29261 29473 . - . ID=gene-HMPREF7215_0579;Name=HMPREF7215_0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0579 GCA_000177335.1|ADFP01000069.1 Genbank CDS 29261 29473 . - 0 ID=cds-EFB90711.1;Parent=gene-HMPREF7215_0579;Dbxref=NCBI_GP:EFB90711.1;Name=EFB90711.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;locus_tag=HMPREF7215_0579;product=cold-shock DNA-binding domain protein;protein_id=EFB90711.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 29427 29573 . + . ID=gene-HMPREF7215_0580;Name=HMPREF7215_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0580 GCA_000177335.1|ADFP01000069.1 Genbank CDS 29427 29573 . + 0 ID=cds-EFB90712.1;Parent=gene-HMPREF7215_0580;Dbxref=NCBI_GP:EFB90712.1;Name=EFB90712.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0580;product=hypothetical protein;protein_id=EFB90712.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 29576 29695 . - . ID=gene-HMPREF7215_0581;Name=HMPREF7215_0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0581 GCA_000177335.1|ADFP01000069.1 Genbank CDS 29576 29695 . - 0 ID=cds-EFB90713.1;Parent=gene-HMPREF7215_0581;Dbxref=NCBI_GP:EFB90713.1;Name=EFB90713.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0581;product=hypothetical protein;protein_id=EFB90713.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 29685 31025 . - . ID=gene-HMPREF7215_0582;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0582 GCA_000177335.1|ADFP01000069.1 Genbank CDS 29685 31025 . - 0 ID=cds-EFB90714.1;Parent=gene-HMPREF7215_0582;Dbxref=NCBI_GP:EFB90714.1;Name=EFB90714.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464;gbkey=CDS;gene=gltX;locus_tag=HMPREF7215_0582;product=glutamate--tRNA ligase;protein_id=EFB90714.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 31136 33736 . + . ID=gene-HMPREF7215_0583;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0583 GCA_000177335.1|ADFP01000069.1 Genbank CDS 31136 33736 . + 0 ID=cds-EFB90715.1;Parent=gene-HMPREF7215_0583;Dbxref=NCBI_GP:EFB90715.1;Name=EFB90715.1;Note=identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;gene=polA;locus_tag=HMPREF7215_0583;product=DNA-directed DNA polymerase;protein_id=EFB90715.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 33807 34913 . + . ID=gene-HMPREF7215_0584;Name=HMPREF7215_0584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0584 GCA_000177335.1|ADFP01000069.1 Genbank CDS 33807 34913 . + 0 ID=cds-EFB90716.1;Parent=gene-HMPREF7215_0584;Dbxref=NCBI_GP:EFB90716.1;Name=EFB90716.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0584;product=hypothetical protein;protein_id=EFB90716.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 35056 35712 . - . ID=gene-HMPREF7215_0585;Name=HMPREF7215_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0585 GCA_000177335.1|ADFP01000069.1 Genbank CDS 35056 35712 . - 0 ID=cds-EFB90717.1;Parent=gene-HMPREF7215_0585;Dbxref=NCBI_GP:EFB90717.1;Name=EFB90717.1;Note=identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_0585;product=ankyrin repeat protein;protein_id=EFB90717.1;transl_table=11 GCA_000177335.1|ADFP01000069.1 Genbank gene 35800 36333 . - . ID=gene-HMPREF7215_0586;Name=HMPREF7215_0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0586 GCA_000177335.1|ADFP01000069.1 Genbank CDS 35800 36333 . - 0 ID=cds-EFB90718.1;Parent=gene-HMPREF7215_0586;Dbxref=NCBI_GP:EFB90718.1;Name=EFB90718.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;locus_tag=HMPREF7215_0586;product=heavy metal-associated domain protein;protein_id=EFB90718.1;transl_table=11 ##sequence-region ADFP01000068.1 1 2242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000068.1 Genbank region 1 2242 . + . ID=ADFP01000068.1:1..2242;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000068.1 Genbank gene 1 1695 . - . ID=gene-HMPREF7215_0773;Name=HMPREF7215_0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0773;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000068.1 Genbank CDS 1 1695 . - 0 ID=cds-EFB90719.1;Parent=gene-HMPREF7215_0773;Dbxref=NCBI_GP:EFB90719.1;Name=EFB90719.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF7215_0773;partial=true;product=Hep/Hag repeat protein;protein_id=EFB90719.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000068.1 Genbank gene 1868 2125 . - . ID=gene-HMPREF7215_0774;Name=HMPREF7215_0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0774 GCA_000177335.1|ADFP01000068.1 Genbank CDS 1868 2125 . - 0 ID=cds-EFB90720.1;Parent=gene-HMPREF7215_0774;Dbxref=NCBI_GP:EFB90720.1;Name=EFB90720.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0774;product=hypothetical protein;protein_id=EFB90720.1;transl_table=11 ##sequence-region ADFP01000067.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000067.1 Genbank region 1 847 . + . ID=ADFP01000067.1:1..847;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000067.1 Genbank gene 25 831 . + . ID=gene-HMPREF7215_0004;Name=HMPREF7215_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0004 GCA_000177335.1|ADFP01000067.1 Genbank CDS 25 831 . + 0 ID=cds-EFB90721.1;Parent=gene-HMPREF7215_0004;Dbxref=NCBI_GP:EFB90721.1;Name=EFB90721.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0004;product=hypothetical protein;protein_id=EFB90721.1;transl_table=11 ##sequence-region ADFP01000066.1 1 18884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000066.1 Genbank region 1 18884 . + . ID=ADFP01000066.1:1..18884;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000066.1 Genbank gene 1 164 . - . ID=gene-HMPREF7215_1043;Name=HMPREF7215_1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1043;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000066.1 Genbank CDS 1 164 . - 0 ID=cds-EFB90722.1;Parent=gene-HMPREF7215_1043;Dbxref=NCBI_GP:EFB90722.1;Name=EFB90722.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1043;partial=true;product=hypothetical protein;protein_id=EFB90722.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 367 573 . + . ID=gene-HMPREF7215_1044;Name=HMPREF7215_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1044 GCA_000177335.1|ADFP01000066.1 Genbank CDS 367 573 . + 0 ID=cds-EFB90723.1;Parent=gene-HMPREF7215_1044;Dbxref=NCBI_GP:EFB90723.1;Name=EFB90723.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1044;product=hypothetical protein;protein_id=EFB90723.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 753 1349 . - . ID=gene-HMPREF7215_1045;Name=HMPREF7215_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1045 GCA_000177335.1|ADFP01000066.1 Genbank CDS 753 1349 . - 0 ID=cds-EFB90724.1;Parent=gene-HMPREF7215_1045;Dbxref=NCBI_GP:EFB90724.1;Name=EFB90724.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1045;product=hypothetical protein;protein_id=EFB90724.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 1499 1630 . - . ID=gene-HMPREF7215_1046;Name=HMPREF7215_1046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1046 GCA_000177335.1|ADFP01000066.1 Genbank CDS 1499 1630 . - 0 ID=cds-EFB90725.1;Parent=gene-HMPREF7215_1046;Dbxref=NCBI_GP:EFB90725.1;Name=EFB90725.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1046;product=hypothetical protein;protein_id=EFB90725.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 1651 2298 . + . ID=gene-HMPREF7215_1047;Name=HMPREF7215_1047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1047 GCA_000177335.1|ADFP01000066.1 Genbank CDS 1651 2298 . + 0 ID=cds-EFB90726.1;Parent=gene-HMPREF7215_1047;Dbxref=NCBI_GP:EFB90726.1;Name=EFB90726.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281;gbkey=CDS;locus_tag=HMPREF7215_1047;product=response regulator receiver domain protein;protein_id=EFB90726.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 2295 3686 . + . ID=gene-HMPREF7215_1048;Name=HMPREF7215_1048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1048 GCA_000177335.1|ADFP01000066.1 Genbank CDS 2295 3686 . + 0 ID=cds-EFB90727.1;Parent=gene-HMPREF7215_1048;Dbxref=NCBI_GP:EFB90727.1;Name=EFB90727.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;locus_tag=HMPREF7215_1048;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB90727.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 3683 3850 . + . ID=gene-HMPREF7215_1049;Name=HMPREF7215_1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1049 GCA_000177335.1|ADFP01000066.1 Genbank CDS 3683 3850 . + 0 ID=cds-EFB90728.1;Parent=gene-HMPREF7215_1049;Dbxref=NCBI_GP:EFB90728.1;Name=EFB90728.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1049;product=hypothetical protein;protein_id=EFB90728.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 3911 5809 . - . ID=gene-HMPREF7215_1050;Name=HMPREF7215_1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1050 GCA_000177335.1|ADFP01000066.1 Genbank CDS 3911 5809 . - 0 ID=cds-EFB90729.1;Parent=gene-HMPREF7215_1050;Dbxref=NCBI_GP:EFB90729.1;Name=EFB90729.1;gbkey=CDS;locus_tag=HMPREF7215_1050;product=hypothetical protein;protein_id=EFB90729.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 5806 6564 . - . ID=gene-HMPREF7215_1051;Name=HMPREF7215_1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1051 GCA_000177335.1|ADFP01000066.1 Genbank CDS 5806 6564 . - 0 ID=cds-EFB90730.1;Parent=gene-HMPREF7215_1051;Dbxref=NCBI_GP:EFB90730.1;Name=EFB90730.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020;gbkey=CDS;locus_tag=HMPREF7215_1051;product=putative peptide chain release factor 2;protein_id=EFB90730.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 6907 7038 . - . ID=gene-HMPREF7215_1052;Name=HMPREF7215_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1052 GCA_000177335.1|ADFP01000066.1 Genbank CDS 6907 7038 . - 0 ID=cds-EFB90731.1;Parent=gene-HMPREF7215_1052;Dbxref=NCBI_GP:EFB90731.1;Name=EFB90731.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1052;product=hypothetical protein;protein_id=EFB90731.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 7122 7379 . + . ID=gene-HMPREF7215_1053;Name=HMPREF7215_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1053 GCA_000177335.1|ADFP01000066.1 Genbank CDS 7122 7379 . + 0 ID=cds-EFB90732.1;Parent=gene-HMPREF7215_1053;Dbxref=NCBI_GP:EFB90732.1;Name=EFB90732.1;gbkey=CDS;locus_tag=HMPREF7215_1053;product=hypothetical protein;protein_id=EFB90732.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 7538 8500 . + . ID=gene-HMPREF7215_1054;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1054 GCA_000177335.1|ADFP01000066.1 Genbank CDS 7538 8500 . + 0 ID=cds-EFB90733.1;Parent=gene-HMPREF7215_1054;Dbxref=NCBI_GP:EFB90733.1;Name=EFB90733.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR00476;gbkey=CDS;gene=selD;locus_tag=HMPREF7215_1054;product=selenide%2C water dikinase;protein_id=EFB90733.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 8603 8719 . + . ID=gene-HMPREF7215_1056;Name=HMPREF7215_1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1056 GCA_000177335.1|ADFP01000066.1 Genbank CDS 8603 8719 . + 0 ID=cds-EFB90734.1;Parent=gene-HMPREF7215_1056;Dbxref=NCBI_GP:EFB90734.1;Name=EFB90734.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1056;product=hypothetical protein;protein_id=EFB90734.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 8706 9557 . - . ID=gene-HMPREF7215_1055;Name=HMPREF7215_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1055 GCA_000177335.1|ADFP01000066.1 Genbank CDS 8706 9557 . - 0 ID=cds-EFB90735.1;Parent=gene-HMPREF7215_1055;Dbxref=NCBI_GP:EFB90735.1;Name=EFB90735.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1055;product=hypothetical protein;protein_id=EFB90735.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 9560 10105 . - . ID=gene-HMPREF7215_1057;Name=HMPREF7215_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1057 GCA_000177335.1|ADFP01000066.1 Genbank CDS 9560 10105 . - 0 ID=cds-EFB90736.1;Parent=gene-HMPREF7215_1057;Dbxref=NCBI_GP:EFB90736.1;Name=EFB90736.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;locus_tag=HMPREF7215_1057;product=phosphoribosyl transferase domain protein;protein_id=EFB90736.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 10143 10745 . - . ID=gene-HMPREF7215_1058;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1058 GCA_000177335.1|ADFP01000066.1 Genbank CDS 10143 10745 . - 0 ID=cds-EFB90737.1;Parent=gene-HMPREF7215_1058;Dbxref=NCBI_GP:EFB90737.1;Name=EFB90737.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01367;gbkey=CDS;gene=pyrE;locus_tag=HMPREF7215_1058;product=orotate phosphoribosyltransferase;protein_id=EFB90737.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 10733 11452 . - . ID=gene-HMPREF7215_1059;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1059 GCA_000177335.1|ADFP01000066.1 Genbank CDS 10733 11452 . - 0 ID=cds-EFB90738.1;Parent=gene-HMPREF7215_1059;Dbxref=NCBI_GP:EFB90738.1;Name=EFB90738.1;Note=identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740;gbkey=CDS;gene=pyrF;locus_tag=HMPREF7215_1059;product=orotidine 5'-phosphate decarboxylase;protein_id=EFB90738.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 11506 12435 . - . ID=gene-HMPREF7215_1060;Name=HMPREF7215_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1060 GCA_000177335.1|ADFP01000066.1 Genbank CDS 11506 12435 . - 0 ID=cds-EFB90739.1;Parent=gene-HMPREF7215_1060;Dbxref=NCBI_GP:EFB90739.1;Name=EFB90739.1;Note=identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;locus_tag=HMPREF7215_1060;product=dihydroorotate oxidase;protein_id=EFB90739.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 12419 13210 . - . ID=gene-HMPREF7215_1061;Name=HMPREF7215_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1061 GCA_000177335.1|ADFP01000066.1 Genbank CDS 12419 13210 . - 0 ID=cds-EFB90740.1;Parent=gene-HMPREF7215_1061;Dbxref=NCBI_GP:EFB90740.1;Name=EFB90740.1;Note=identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;locus_tag=HMPREF7215_1061;product=oxidoreductase%2C FAD-binding protein;protein_id=EFB90740.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 13322 14605 . - . ID=gene-HMPREF7215_1062;Name=HMPREF7215_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1062 GCA_000177335.1|ADFP01000066.1 Genbank CDS 13322 14605 . - 0 ID=cds-EFB90741.1;Parent=gene-HMPREF7215_1062;Dbxref=NCBI_GP:EFB90741.1;Name=EFB90741.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00857;gbkey=CDS;locus_tag=HMPREF7215_1062;product=amidohydrolase family protein;protein_id=EFB90741.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 14649 15875 . - . ID=gene-HMPREF7215_1063;Name=HMPREF7215_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1063 GCA_000177335.1|ADFP01000066.1 Genbank CDS 14649 15875 . - 0 ID=cds-EFB90742.1;Parent=gene-HMPREF7215_1063;Dbxref=NCBI_GP:EFB90742.1;Name=EFB90742.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01879;gbkey=CDS;locus_tag=HMPREF7215_1063;product=amidase%2C hydantoinase/carbamoylase family;protein_id=EFB90742.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 15888 17168 . - . ID=gene-HMPREF7215_1064;Name=HMPREF7215_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1064 GCA_000177335.1|ADFP01000066.1 Genbank CDS 15888 17168 . - 0 ID=cds-EFB90743.1;Parent=gene-HMPREF7215_1064;Dbxref=NCBI_GP:EFB90743.1;Name=EFB90743.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_1064;product=TRAP transporter%2C DctM subunit;protein_id=EFB90743.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 17169 17627 . - . ID=gene-HMPREF7215_1065;Name=HMPREF7215_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1065 GCA_000177335.1|ADFP01000066.1 Genbank CDS 17169 17627 . - 0 ID=cds-EFB90744.1;Parent=gene-HMPREF7215_1065;Dbxref=NCBI_GP:EFB90744.1;Name=EFB90744.1;Note=identified by match to protein family HMM PF04290;gbkey=CDS;locus_tag=HMPREF7215_1065;product=TRAP transporter%2C DctQ-like membrane protein;protein_id=EFB90744.1;transl_table=11 GCA_000177335.1|ADFP01000066.1 Genbank gene 17769 18764 . - . ID=gene-HMPREF7215_1066;Name=HMPREF7215_1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1066 GCA_000177335.1|ADFP01000066.1 Genbank CDS 17769 18764 . - 0 ID=cds-EFB90745.1;Parent=gene-HMPREF7215_1066;Dbxref=NCBI_GP:EFB90745.1;Name=EFB90745.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03480%3B match to protein family HMM TIGR00787;gbkey=CDS;locus_tag=HMPREF7215_1066;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB90745.1;transl_table=11 ##sequence-region ADFP01000065.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000065.1 Genbank region 1 536 . + . ID=ADFP01000065.1:1..536;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000065.1 Genbank gene 1 110 . + . ID=gene-HMPREF7215_2322;Name=HMPREF7215_2322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2322;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000065.1 Genbank CDS 1 110 . + 2 ID=cds-EFB90746.1;Parent=gene-HMPREF7215_2322;Dbxref=NCBI_GP:EFB90746.1;Name=EFB90746.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2322;partial=true;product=hypothetical protein;protein_id=EFB90746.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000065.1 Genbank gene 103 536 . + . ID=gene-HMPREF7215_2323;Name=HMPREF7215_2323;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2323;partial=true GCA_000177335.1|ADFP01000065.1 Genbank CDS 103 536 . + 0 ID=cds-EFB90747.1;Parent=gene-HMPREF7215_2323;Dbxref=NCBI_GP:EFB90747.1;Name=EFB90747.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=536,.;gbkey=CDS;locus_tag=HMPREF7215_2323;partial=true;product=hypothetical protein;protein_id=EFB90747.1;transl_table=11 ##sequence-region ADFP01000064.1 1 44589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000064.1 Genbank region 1 44589 . + . ID=ADFP01000064.1:1..44589;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000064.1 Genbank gene 1 1084 . + . ID=gene-HMPREF7215_0792;Name=HMPREF7215_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0792;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000064.1 Genbank CDS 1 1084 . + 1 ID=cds-EFB90748.1;Parent=gene-HMPREF7215_0792;Dbxref=NCBI_GP:EFB90748.1;Name=EFB90748.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02518%3B match to protein family HMM PF08448;gbkey=CDS;locus_tag=HMPREF7215_0792;partial=true;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB90748.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 1119 1730 . - . ID=gene-HMPREF7215_0793;Name=HMPREF7215_0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0793 GCA_000177335.1|ADFP01000064.1 Genbank CDS 1119 1730 . - 0 ID=cds-EFB90749.1;Parent=gene-HMPREF7215_0793;Dbxref=NCBI_GP:EFB90749.1;Name=EFB90749.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281;gbkey=CDS;locus_tag=HMPREF7215_0793;product=response regulator receiver domain protein;protein_id=EFB90749.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 1791 3311 . + . ID=gene-HMPREF7215_0794;Name=HMPREF7215_0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0794 GCA_000177335.1|ADFP01000064.1 Genbank CDS 1791 3311 . + 0 ID=cds-EFB90750.1;Parent=gene-HMPREF7215_0794;Dbxref=NCBI_GP:EFB90750.1;Name=EFB90750.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0794;product=Tat pathway signal sequence domain protein;protein_id=EFB90750.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 3335 4465 . + . ID=gene-HMPREF7215_0795;Name=HMPREF7215_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0795 GCA_000177335.1|ADFP01000064.1 Genbank CDS 3335 4465 . + 0 ID=cds-EFB90751.1;Parent=gene-HMPREF7215_0795;Dbxref=NCBI_GP:EFB90751.1;Name=EFB90751.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0795;product=hypothetical protein;protein_id=EFB90751.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 4482 6152 . + . ID=gene-HMPREF7215_0796;Name=HMPREF7215_0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0796 GCA_000177335.1|ADFP01000064.1 Genbank CDS 4482 6152 . + 0 ID=cds-EFB90752.1;Parent=gene-HMPREF7215_0796;Dbxref=NCBI_GP:EFB90752.1;Name=EFB90752.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0796;product=hypothetical protein;protein_id=EFB90752.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 6149 6361 . + . ID=gene-HMPREF7215_0797;Name=HMPREF7215_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0797 GCA_000177335.1|ADFP01000064.1 Genbank CDS 6149 6361 . + 0 ID=cds-EFB90753.1;Parent=gene-HMPREF7215_0797;Dbxref=NCBI_GP:EFB90753.1;Name=EFB90753.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0797;product=hypothetical protein;protein_id=EFB90753.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 6358 6477 . + . ID=gene-HMPREF7215_0798;Name=HMPREF7215_0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0798 GCA_000177335.1|ADFP01000064.1 Genbank CDS 6358 6477 . + 0 ID=cds-EFB90754.1;Parent=gene-HMPREF7215_0798;Dbxref=NCBI_GP:EFB90754.1;Name=EFB90754.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0798;product=hypothetical protein;protein_id=EFB90754.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 6492 7847 . + . ID=gene-HMPREF7215_0799;Name=HMPREF7215_0799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0799 GCA_000177335.1|ADFP01000064.1 Genbank CDS 6492 7847 . + 0 ID=cds-EFB90755.1;Parent=gene-HMPREF7215_0799;Dbxref=NCBI_GP:EFB90755.1;Name=EFB90755.1;gbkey=CDS;locus_tag=HMPREF7215_0799;product=hypothetical protein;protein_id=EFB90755.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 7896 9176 . + . ID=gene-HMPREF7215_0800;Name=HMPREF7215_0800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0800 GCA_000177335.1|ADFP01000064.1 Genbank CDS 7896 9176 . + 0 ID=cds-EFB90756.1;Parent=gene-HMPREF7215_0800;Dbxref=NCBI_GP:EFB90756.1;Name=EFB90756.1;gbkey=CDS;locus_tag=HMPREF7215_0800;product=hypothetical protein;protein_id=EFB90756.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 9213 14483 . + . ID=gene-HMPREF7215_0801;Name=HMPREF7215_0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0801 GCA_000177335.1|ADFP01000064.1 Genbank CDS 9213 14483 . + 0 ID=cds-EFB90757.1;Parent=gene-HMPREF7215_0801;Dbxref=NCBI_GP:EFB90757.1;Name=EFB90757.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01835%3B match to protein family HMM PF07703;gbkey=CDS;locus_tag=HMPREF7215_0801;product=alpha-2-macroglobulin family protein;protein_id=EFB90757.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 14496 16733 . + . ID=gene-HMPREF7215_0802;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0802 GCA_000177335.1|ADFP01000064.1 Genbank CDS 14496 16733 . + 0 ID=cds-EFB90758.1;Parent=gene-HMPREF7215_0802;Dbxref=NCBI_GP:EFB90758.1;Name=EFB90758.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02073;gbkey=CDS;gene=pbpC;locus_tag=HMPREF7215_0802;product=penicillin-binding protein 1C;protein_id=EFB90758.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 16935 18122 . - . ID=gene-HMPREF7215_0803;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=HMPREF7215_0803 GCA_000177335.1|ADFP01000064.1 Genbank CDS 16935 18122 . - 0 ID=cds-EFB90759.1;Parent=gene-HMPREF7215_0803;Dbxref=NCBI_GP:EFB90759.1;Name=EFB90759.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186;gbkey=CDS;gene=proV;locus_tag=HMPREF7215_0803;product=glycine betaine/L-proline transport ATP binding subunit;protein_id=EFB90759.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 18103 19005 . - . ID=gene-HMPREF7215_0804;Name=HMPREF7215_0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0804 GCA_000177335.1|ADFP01000064.1 Genbank CDS 18103 19005 . - 0 ID=cds-EFB90760.1;Parent=gene-HMPREF7215_0804;Dbxref=NCBI_GP:EFB90760.1;Name=EFB90760.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0804;product=ABC transporter%2C permease protein;protein_id=EFB90760.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 19042 20019 . - . ID=gene-HMPREF7215_0805;Name=HMPREF7215_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0805 GCA_000177335.1|ADFP01000064.1 Genbank CDS 19042 20019 . - 0 ID=cds-EFB90761.1;Parent=gene-HMPREF7215_0805;Dbxref=NCBI_GP:EFB90761.1;Name=EFB90761.1;Note=identified by match to protein family HMM PF04069;gbkey=CDS;locus_tag=HMPREF7215_0805;product=ABC transporter%2C substrate-binding protein%2C QAT family;protein_id=EFB90761.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 20062 20208 . + . ID=gene-HMPREF7215_0807;Name=HMPREF7215_0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0807 GCA_000177335.1|ADFP01000064.1 Genbank CDS 20062 20208 . + 0 ID=cds-EFB90762.1;Parent=gene-HMPREF7215_0807;Dbxref=NCBI_GP:EFB90762.1;Name=EFB90762.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0807;product=hypothetical protein;protein_id=EFB90762.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 20168 20815 . - . ID=gene-HMPREF7215_0806;Name=HMPREF7215_0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0806 GCA_000177335.1|ADFP01000064.1 Genbank CDS 20168 20815 . - 0 ID=cds-EFB90763.1;Parent=gene-HMPREF7215_0806;Dbxref=NCBI_GP:EFB90763.1;Name=EFB90763.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF02080;gbkey=CDS;locus_tag=HMPREF7215_0806;product=TrkA C-terminal domain protein;protein_id=EFB90763.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 21265 21444 . - . ID=gene-HMPREF7215_0808;Name=HMPREF7215_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0808 GCA_000177335.1|ADFP01000064.1 Genbank CDS 21265 21444 . - 0 ID=cds-EFB90764.1;Parent=gene-HMPREF7215_0808;Dbxref=NCBI_GP:EFB90764.1;Name=EFB90764.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0808;product=hypothetical protein;protein_id=EFB90764.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 21641 23161 . + . ID=gene-HMPREF7215_0809;Name=HMPREF7215_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0809 GCA_000177335.1|ADFP01000064.1 Genbank CDS 21641 23161 . + 0 ID=cds-EFB90765.1;Parent=gene-HMPREF7215_0809;Dbxref=NCBI_GP:EFB90765.1;Name=EFB90765.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_0809;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB90765.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 23331 24260 . + . ID=gene-HMPREF7215_0810;Name=HMPREF7215_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0810 GCA_000177335.1|ADFP01000064.1 Genbank CDS 23331 24260 . + 0 ID=cds-EFB90766.1;Parent=gene-HMPREF7215_0810;Dbxref=NCBI_GP:EFB90766.1;Name=EFB90766.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0810;product=ABC transporter%2C permease protein;protein_id=EFB90766.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 24275 25156 . + . ID=gene-HMPREF7215_0811;Name=HMPREF7215_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0811 GCA_000177335.1|ADFP01000064.1 Genbank CDS 24275 25156 . + 0 ID=cds-EFB90767.1;Parent=gene-HMPREF7215_0811;Dbxref=NCBI_GP:EFB90767.1;Name=EFB90767.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0811;product=ABC transporter%2C permease protein;protein_id=EFB90767.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 25170 26159 . + . ID=gene-HMPREF7215_0812;Name=HMPREF7215_0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0812 GCA_000177335.1|ADFP01000064.1 Genbank CDS 25170 26159 . + 0 ID=cds-EFB90768.1;Parent=gene-HMPREF7215_0812;Dbxref=NCBI_GP:EFB90768.1;Name=EFB90768.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0812;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90768.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 26175 27158 . + . ID=gene-HMPREF7215_0813;Name=HMPREF7215_0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0813 GCA_000177335.1|ADFP01000064.1 Genbank CDS 26175 27158 . + 0 ID=cds-EFB90769.1;Parent=gene-HMPREF7215_0813;Dbxref=NCBI_GP:EFB90769.1;Name=EFB90769.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0813;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90769.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 27279 28514 . + . ID=gene-HMPREF7215_0814;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=HMPREF7215_0814 GCA_000177335.1|ADFP01000064.1 Genbank CDS 27279 28514 . + 0 ID=cds-EFB90770.1;Parent=gene-HMPREF7215_0814;Dbxref=NCBI_GP:EFB90770.1;Name=EFB90770.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882;gbkey=CDS;gene=pepT;locus_tag=HMPREF7215_0814;product=peptidase T;protein_id=EFB90770.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 28607 30154 . - . ID=gene-HMPREF7215_0815;Name=HMPREF7215_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0815 GCA_000177335.1|ADFP01000064.1 Genbank CDS 28607 30154 . - 0 ID=cds-EFB90771.1;Parent=gene-HMPREF7215_0815;Dbxref=NCBI_GP:EFB90771.1;Name=EFB90771.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0815;product=hypothetical protein;protein_id=EFB90771.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 30465 32453 . - . ID=gene-HMPREF7215_0816;Name=HMPREF7215_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0816 GCA_000177335.1|ADFP01000064.1 Genbank CDS 30465 32453 . - 0 ID=cds-EFB90772.1;Parent=gene-HMPREF7215_0816;Dbxref=NCBI_GP:EFB90772.1;Name=EFB90772.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;locus_tag=HMPREF7215_0816;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=EFB90772.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 32468 32995 . - . ID=gene-HMPREF7215_0817;Name=HMPREF7215_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0817 GCA_000177335.1|ADFP01000064.1 Genbank CDS 32468 32995 . - 0 ID=cds-EFB90773.1;Parent=gene-HMPREF7215_0817;Dbxref=NCBI_GP:EFB90773.1;Name=EFB90773.1;Note=identified by match to protein family HMM PF08905;gbkey=CDS;locus_tag=HMPREF7215_0817;product=hypothetical protein;protein_id=EFB90773.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 33132 34091 . - . ID=gene-HMPREF7215_0818;Name=HMPREF7215_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0818 GCA_000177335.1|ADFP01000064.1 Genbank CDS 33132 34091 . - 0 ID=cds-EFB90774.1;Parent=gene-HMPREF7215_0818;Dbxref=NCBI_GP:EFB90774.1;Name=EFB90774.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_0818;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB90774.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 34088 34204 . - . ID=gene-HMPREF7215_0819;Name=HMPREF7215_0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0819 GCA_000177335.1|ADFP01000064.1 Genbank CDS 34088 34204 . - 0 ID=cds-EFB90775.1;Parent=gene-HMPREF7215_0819;Dbxref=NCBI_GP:EFB90775.1;Name=EFB90775.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0819;product=hypothetical protein;protein_id=EFB90775.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 34584 36305 . - . ID=gene-HMPREF7215_0820;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=HMPREF7215_0820 GCA_000177335.1|ADFP01000064.1 Genbank CDS 34584 36305 . - 0 ID=cds-EFB90776.1;Parent=gene-HMPREF7215_0820;Dbxref=NCBI_GP:EFB90776.1;Name=EFB90776.1;Note=identified by match to protein family HMM PF01019%3B match to protein family HMM TIGR00066;gbkey=CDS;gene=ggt;locus_tag=HMPREF7215_0820;product=gamma-glutamyltransferase;protein_id=EFB90776.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 36376 37521 . - . ID=gene-HMPREF7215_0821;Name=HMPREF7215_0821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0821 GCA_000177335.1|ADFP01000064.1 Genbank CDS 36376 37521 . - 0 ID=cds-EFB90777.1;Parent=gene-HMPREF7215_0821;Dbxref=NCBI_GP:EFB90777.1;Name=EFB90777.1;Note=identified by match to protein family HMM PF04952;gbkey=CDS;locus_tag=HMPREF7215_0821;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=EFB90777.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 37535 37678 . - . ID=gene-HMPREF7215_0822;Name=HMPREF7215_0822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0822 GCA_000177335.1|ADFP01000064.1 Genbank CDS 37535 37678 . - 0 ID=cds-EFB90778.1;Parent=gene-HMPREF7215_0822;Dbxref=NCBI_GP:EFB90778.1;Name=EFB90778.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0822;product=hypothetical protein;protein_id=EFB90778.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 37693 38979 . - . ID=gene-HMPREF7215_0823;Name=HMPREF7215_0823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0823 GCA_000177335.1|ADFP01000064.1 Genbank CDS 37693 38979 . - 0 ID=cds-EFB90779.1;Parent=gene-HMPREF7215_0823;Dbxref=NCBI_GP:EFB90779.1;Name=EFB90779.1;Note=identified by match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;locus_tag=HMPREF7215_0823;product=citrate transporter;protein_id=EFB90779.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 38989 39537 . - . ID=gene-HMPREF7215_0824;Name=HMPREF7215_0824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0824 GCA_000177335.1|ADFP01000064.1 Genbank CDS 38989 39537 . - 0 ID=cds-EFB90780.1;Parent=gene-HMPREF7215_0824;Dbxref=NCBI_GP:EFB90780.1;Name=EFB90780.1;gbkey=CDS;locus_tag=HMPREF7215_0824;product=hypothetical protein;protein_id=EFB90780.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 39668 40471 . - . ID=gene-HMPREF7215_0825;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=HMPREF7215_0825 GCA_000177335.1|ADFP01000064.1 Genbank CDS 39668 40471 . - 0 ID=cds-EFB90781.1;Parent=gene-HMPREF7215_0825;Dbxref=NCBI_GP:EFB90781.1;Name=EFB90781.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;locus_tag=HMPREF7215_0825;product=glutamate racemase;protein_id=EFB90781.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 40629 42479 . - . ID=gene-HMPREF7215_0826;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0826 GCA_000177335.1|ADFP01000064.1 Genbank CDS 40629 42479 . - 0 ID=cds-EFB90782.1;Parent=gene-HMPREF7215_0826;Dbxref=NCBI_GP:EFB90782.1;Name=EFB90782.1;Note=identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181;gbkey=CDS;gene=pepF;locus_tag=HMPREF7215_0826;product=oligoendopeptidase F;protein_id=EFB90782.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 42512 43276 . - . ID=gene-HMPREF7215_0827;Name=HMPREF7215_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0827 GCA_000177335.1|ADFP01000064.1 Genbank CDS 42512 43276 . - 0 ID=cds-EFB90783.1;Parent=gene-HMPREF7215_0827;Dbxref=NCBI_GP:EFB90783.1;Name=EFB90783.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0827;product=hypothetical protein;protein_id=EFB90783.1;transl_table=11 GCA_000177335.1|ADFP01000064.1 Genbank gene 43911 44570 . + . ID=gene-HMPREF7215_0828;Name=HMPREF7215_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0828 GCA_000177335.1|ADFP01000064.1 Genbank CDS 43911 44570 . + 0 ID=cds-EFB90784.1;Parent=gene-HMPREF7215_0828;Dbxref=NCBI_GP:EFB90784.1;Name=EFB90784.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF7215_0828;product=nitroreductase family protein;protein_id=EFB90784.1;transl_table=11 ##sequence-region ADFP01000063.1 1 7029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000063.1 Genbank region 1 7029 . + . ID=ADFP01000063.1:1..7029;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000063.1 Genbank gene 1 283 . - . ID=gene-HMPREF7215_1845;Name=HMPREF7215_1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1845;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000063.1 Genbank CDS 1 283 . - 0 ID=cds-EFB90785.1;Parent=gene-HMPREF7215_1845;Dbxref=NCBI_GP:EFB90785.1;Name=EFB90785.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1845;partial=true;product=hypothetical protein;protein_id=EFB90785.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 283 648 . - . ID=gene-HMPREF7215_1846;Name=HMPREF7215_1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1846 GCA_000177335.1|ADFP01000063.1 Genbank CDS 283 648 . - 0 ID=cds-EFB90786.1;Parent=gene-HMPREF7215_1846;Dbxref=NCBI_GP:EFB90786.1;Name=EFB90786.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1846;product=hypothetical protein;protein_id=EFB90786.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 684 833 . - . ID=gene-HMPREF7215_1847;Name=HMPREF7215_1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1847 GCA_000177335.1|ADFP01000063.1 Genbank CDS 684 833 . - 0 ID=cds-EFB90787.1;Parent=gene-HMPREF7215_1847;Dbxref=NCBI_GP:EFB90787.1;Name=EFB90787.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1847;product=hypothetical protein;protein_id=EFB90787.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 941 2407 . - . ID=gene-HMPREF7215_1848;Name=HMPREF7215_1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1848 GCA_000177335.1|ADFP01000063.1 Genbank CDS 941 2407 . - 0 ID=cds-EFB90788.1;Parent=gene-HMPREF7215_1848;Dbxref=NCBI_GP:EFB90788.1;Name=EFB90788.1;Note=identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=HMPREF7215_1848;product=potassium uptake protein%2C TrkH family;protein_id=EFB90788.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 2404 3774 . - . ID=gene-HMPREF7215_1849;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1849 GCA_000177335.1|ADFP01000063.1 Genbank CDS 2404 3774 . - 0 ID=cds-EFB90789.1;Parent=gene-HMPREF7215_1849;Dbxref=NCBI_GP:EFB90789.1;Name=EFB90789.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;gene=trkA;locus_tag=HMPREF7215_1849;product=potassium transporter peripheral membrane component;protein_id=EFB90789.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 3837 3971 . - . ID=gene-HMPREF7215_1850;Name=HMPREF7215_1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1850 GCA_000177335.1|ADFP01000063.1 Genbank CDS 3837 3971 . - 0 ID=cds-EFB90790.1;Parent=gene-HMPREF7215_1850;Dbxref=NCBI_GP:EFB90790.1;Name=EFB90790.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1850;product=hypothetical protein;protein_id=EFB90790.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 3968 5434 . - . ID=gene-HMPREF7215_1851;Name=HMPREF7215_1851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1851 GCA_000177335.1|ADFP01000063.1 Genbank CDS 3968 5434 . - 0 ID=cds-EFB90791.1;Parent=gene-HMPREF7215_1851;Dbxref=NCBI_GP:EFB90791.1;Name=EFB90791.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_1851;product=membrane protein;protein_id=EFB90791.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 5450 5953 . - . ID=gene-HMPREF7215_1852;Name=HMPREF7215_1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1852 GCA_000177335.1|ADFP01000063.1 Genbank CDS 5450 5953 . - 0 ID=cds-EFB90792.1;Parent=gene-HMPREF7215_1852;Dbxref=NCBI_GP:EFB90792.1;Name=EFB90792.1;gbkey=CDS;locus_tag=HMPREF7215_1852;product=hypothetical protein;protein_id=EFB90792.1;transl_table=11 GCA_000177335.1|ADFP01000063.1 Genbank gene 5981 7029 . - . ID=gene-HMPREF7215_1853;Name=HMPREF7215_1853;end_range=7029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1853;partial=true GCA_000177335.1|ADFP01000063.1 Genbank CDS 5981 7029 . - 2 ID=cds-EFB90793.1;Parent=gene-HMPREF7215_1853;Dbxref=NCBI_GP:EFB90793.1;Name=EFB90793.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03401;end_range=7029,.;gbkey=CDS;locus_tag=HMPREF7215_1853;partial=true;product=hypothetical protein;protein_id=EFB90793.1;transl_table=11 ##sequence-region ADFP01000062.1 1 25167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000062.1 Genbank region 1 25167 . + . ID=ADFP01000062.1:1..25167;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000062.1 Genbank gene 23 175 . - . ID=gene-HMPREF7215_0100;Name=HMPREF7215_0100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0100 GCA_000177335.1|ADFP01000062.1 Genbank CDS 23 175 . - 0 ID=cds-EFB90794.1;Parent=gene-HMPREF7215_0100;Dbxref=NCBI_GP:EFB90794.1;Name=EFB90794.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0100;product=hypothetical protein;protein_id=EFB90794.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 306 1982 . + . ID=gene-HMPREF7215_0101;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=HMPREF7215_0101 GCA_000177335.1|ADFP01000062.1 Genbank CDS 306 1982 . + 0 ID=cds-EFB90795.1;Parent=gene-HMPREF7215_0101;Dbxref=NCBI_GP:EFB90795.1;Name=EFB90795.1;Note=identified by match to protein family HMM PF00485;gbkey=CDS;gene=udk;locus_tag=HMPREF7215_0101;product=phosphoribulokinase/uridine kinase family protein;protein_id=EFB90795.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 1993 2820 . + . ID=gene-HMPREF7215_0102;Name=HMPREF7215_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0102 GCA_000177335.1|ADFP01000062.1 Genbank CDS 1993 2820 . + 0 ID=cds-EFB90796.1;Parent=gene-HMPREF7215_0102;Dbxref=NCBI_GP:EFB90796.1;Name=EFB90796.1;Note=identified by match to protein family HMM PF00356;gbkey=CDS;locus_tag=HMPREF7215_0102;product=transcriptional regulator%2C LacI family;protein_id=EFB90796.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 2879 3703 . + . ID=gene-HMPREF7215_0103;Name=HMPREF7215_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0103 GCA_000177335.1|ADFP01000062.1 Genbank CDS 2879 3703 . + 0 ID=cds-EFB90797.1;Parent=gene-HMPREF7215_0103;Dbxref=NCBI_GP:EFB90797.1;Name=EFB90797.1;gbkey=CDS;locus_tag=HMPREF7215_0103;product=hypothetical protein;protein_id=EFB90797.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 3711 4016 . + . ID=gene-HMPREF7215_0104;Name=HMPREF7215_0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0104 GCA_000177335.1|ADFP01000062.1 Genbank CDS 3711 4016 . + 0 ID=cds-EFB90798.1;Parent=gene-HMPREF7215_0104;Dbxref=NCBI_GP:EFB90798.1;Name=EFB90798.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0104;product=hypothetical protein;protein_id=EFB90798.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 4013 4957 . + . ID=gene-HMPREF7215_0105;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0105 GCA_000177335.1|ADFP01000062.1 Genbank CDS 4013 4957 . + 0 ID=cds-EFB90799.1;Parent=gene-HMPREF7215_0105;Dbxref=NCBI_GP:EFB90799.1;Name=EFB90799.1;Note=identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091;gbkey=CDS;gene=trmB;locus_tag=HMPREF7215_0105;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=EFB90799.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 4954 5460 . + . ID=gene-HMPREF7215_0106;Name=HMPREF7215_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0106 GCA_000177335.1|ADFP01000062.1 Genbank CDS 4954 5460 . + 0 ID=cds-EFB90800.1;Parent=gene-HMPREF7215_0106;Dbxref=NCBI_GP:EFB90800.1;Name=EFB90800.1;Note=identified by match to protein family HMM PF03602;gbkey=CDS;locus_tag=HMPREF7215_0106;product=putative RNA methyltransferase%2C RsmD family;protein_id=EFB90800.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 5447 5965 . + . ID=gene-HMPREF7215_0108;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0108 GCA_000177335.1|ADFP01000062.1 Genbank CDS 5447 5965 . + 0 ID=cds-EFB90801.1;Parent=gene-HMPREF7215_0108;Dbxref=NCBI_GP:EFB90801.1;Name=EFB90801.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510;gbkey=CDS;gene=coaD;locus_tag=HMPREF7215_0108;product=pantetheine-phosphate adenylyltransferase;protein_id=EFB90801.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 5962 7173 . - . ID=gene-HMPREF7215_0107;Name=HMPREF7215_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0107 GCA_000177335.1|ADFP01000062.1 Genbank CDS 5962 7173 . - 0 ID=cds-EFB90802.1;Parent=gene-HMPREF7215_0107;Dbxref=NCBI_GP:EFB90802.1;Name=EFB90802.1;Note=identified by match to protein family HMM PF05636;gbkey=CDS;locus_tag=HMPREF7215_0107;product=hypothetical protein;protein_id=EFB90802.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 7273 8460 . + . ID=gene-HMPREF7215_0109;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0109 GCA_000177335.1|ADFP01000062.1 Genbank CDS 7273 8460 . + 0 ID=cds-EFB90803.1;Parent=gene-HMPREF7215_0109;Dbxref=NCBI_GP:EFB90803.1;Name=EFB90803.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA;locus_tag=HMPREF7215_0109;product=acetate kinase;protein_id=EFB90803.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 8492 9058 . + . ID=gene-HMPREF7215_0110;Name=HMPREF7215_0110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0110 GCA_000177335.1|ADFP01000062.1 Genbank CDS 8492 9058 . + 0 ID=cds-EFB90804.1;Parent=gene-HMPREF7215_0110;Dbxref=NCBI_GP:EFB90804.1;Name=EFB90804.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0110;product=hypothetical protein;protein_id=EFB90804.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 9061 9276 . + . ID=gene-HMPREF7215_0111;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0111 GCA_000177335.1|ADFP01000062.1 Genbank CDS 9061 9276 . + 0 ID=cds-EFB90805.1;Parent=gene-HMPREF7215_0111;Dbxref=NCBI_GP:EFB90805.1;Name=EFB90805.1;Note=identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031;gbkey=CDS;gene=rpmF;locus_tag=HMPREF7215_0111;product=ribosomal protein L32;protein_id=EFB90805.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 9578 10180 . + . ID=gene-HMPREF7215_0112;Name=HMPREF7215_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0112 GCA_000177335.1|ADFP01000062.1 Genbank CDS 9578 10180 . + 0 ID=cds-EFB90806.1;Parent=gene-HMPREF7215_0112;Dbxref=NCBI_GP:EFB90806.1;Name=EFB90806.1;gbkey=CDS;locus_tag=HMPREF7215_0112;product=fatty acid biosynthesis transcriptional regulator family protein;protein_id=EFB90806.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 10183 11214 . + . ID=gene-HMPREF7215_0113;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0113 GCA_000177335.1|ADFP01000062.1 Genbank CDS 10183 11214 . + 0 ID=cds-EFB90807.1;Parent=gene-HMPREF7215_0113;Dbxref=NCBI_GP:EFB90807.1;Name=EFB90807.1;Note=identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182;gbkey=CDS;gene=plsX;locus_tag=HMPREF7215_0113;product=fatty acid/phospholipid synthesis protein PlsX;protein_id=EFB90807.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 11311 12252 . + . ID=gene-HMPREF7215_0114;Name=HMPREF7215_0114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0114 GCA_000177335.1|ADFP01000062.1 Genbank CDS 11311 12252 . + 0 ID=cds-EFB90808.1;Parent=gene-HMPREF7215_0114;Dbxref=NCBI_GP:EFB90808.1;Name=EFB90808.1;Note=identified by match to protein family HMM PF03060;gbkey=CDS;locus_tag=HMPREF7215_0114;product=putative enoyl-[acyl-carrier-protein] reductase II;protein_id=EFB90808.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 12268 13218 . + . ID=gene-HMPREF7215_0115;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0115 GCA_000177335.1|ADFP01000062.1 Genbank CDS 12268 13218 . + 0 ID=cds-EFB90809.1;Parent=gene-HMPREF7215_0115;Dbxref=NCBI_GP:EFB90809.1;Name=EFB90809.1;Note=identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128;gbkey=CDS;gene=fabD;locus_tag=HMPREF7215_0115;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=EFB90809.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 13221 13958 . + . ID=gene-HMPREF7215_0116;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF7215_0116 GCA_000177335.1|ADFP01000062.1 Genbank CDS 13221 13958 . + 0 ID=cds-EFB90810.1;Parent=gene-HMPREF7215_0116;Dbxref=NCBI_GP:EFB90810.1;Name=EFB90810.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;locus_tag=HMPREF7215_0116;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=EFB90810.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 14007 14258 . + . ID=gene-HMPREF7215_0117;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=HMPREF7215_0117 GCA_000177335.1|ADFP01000062.1 Genbank CDS 14007 14258 . + 0 ID=cds-EFB90811.1;Parent=gene-HMPREF7215_0117;Dbxref=NCBI_GP:EFB90811.1;Name=EFB90811.1;Note=identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517;gbkey=CDS;gene=acpP;locus_tag=HMPREF7215_0117;product=acyl carrier protein;protein_id=EFB90811.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 14365 15603 . + . ID=gene-HMPREF7215_0118;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0118 GCA_000177335.1|ADFP01000062.1 Genbank CDS 14365 15603 . + 0 ID=cds-EFB90812.1;Parent=gene-HMPREF7215_0118;Dbxref=NCBI_GP:EFB90812.1;Name=EFB90812.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150;gbkey=CDS;gene=fabF;locus_tag=HMPREF7215_0118;product=beta-ketoacyl-acyl-carrier-protein synthase II;protein_id=EFB90812.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 15603 16298 . + . ID=gene-HMPREF7215_0119;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=HMPREF7215_0119 GCA_000177335.1|ADFP01000062.1 Genbank CDS 15603 16298 . + 0 ID=cds-EFB90813.1;Parent=gene-HMPREF7215_0119;Dbxref=NCBI_GP:EFB90813.1;Name=EFB90813.1;Note=identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;locus_tag=HMPREF7215_0119;product=ribonuclease III;protein_id=EFB90813.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 16437 17741 . + . ID=gene-HMPREF7215_0120;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0120 GCA_000177335.1|ADFP01000062.1 Genbank CDS 16437 17741 . + 0 ID=cds-EFB90814.1;Parent=gene-HMPREF7215_0120;Dbxref=NCBI_GP:EFB90814.1;Name=EFB90814.1;Note=identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432;gbkey=CDS;gene=tilS;locus_tag=HMPREF7215_0120;product=tRNA(Ile)-lysidine synthetase;protein_id=EFB90814.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 17732 18271 . + . ID=gene-HMPREF7215_0121;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=HMPREF7215_0121 GCA_000177335.1|ADFP01000062.1 Genbank CDS 17732 18271 . + 0 ID=cds-EFB90815.1;Parent=gene-HMPREF7215_0121;Dbxref=NCBI_GP:EFB90815.1;Name=EFB90815.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203;gbkey=CDS;gene=hpt;locus_tag=HMPREF7215_0121;product=hypoxanthine phosphoribosyltransferase;protein_id=EFB90815.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 18299 20275 . + . ID=gene-HMPREF7215_0122;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0122 GCA_000177335.1|ADFP01000062.1 Genbank CDS 18299 20275 . + 0 ID=cds-EFB90816.1;Parent=gene-HMPREF7215_0122;Dbxref=NCBI_GP:EFB90816.1;Name=EFB90816.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=hflB;locus_tag=HMPREF7215_0122;product=ATP-dependent metallopeptidase HflB;protein_id=EFB90816.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 20375 22426 . + . ID=gene-HMPREF7215_0123;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0123 GCA_000177335.1|ADFP01000062.1 Genbank CDS 20375 22426 . + 0 ID=cds-EFB90817.1;Parent=gene-HMPREF7215_0123;Dbxref=NCBI_GP:EFB90817.1;Name=EFB90817.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00631;gbkey=CDS;gene=uvrB;locus_tag=HMPREF7215_0123;product=excinuclease ABC%2C B subunit;protein_id=EFB90817.1;transl_table=11 GCA_000177335.1|ADFP01000062.1 Genbank gene 22383 25167 . + . ID=gene-HMPREF7215_0124;Name=uvrA;end_range=25167,.;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0124;partial=true GCA_000177335.1|ADFP01000062.1 Genbank CDS 22383 25167 . + 0 ID=cds-EFB90818.1;Parent=gene-HMPREF7215_0124;Dbxref=NCBI_GP:EFB90818.1;Name=EFB90818.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;end_range=25167,.;gbkey=CDS;gene=uvrA;locus_tag=HMPREF7215_0124;partial=true;product=excinuclease ABC%2C A subunit;protein_id=EFB90818.1;transl_table=11 ##sequence-region ADFP01000061.1 1 32359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000061.1 Genbank region 1 32359 . + . ID=ADFP01000061.1:1..32359;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000061.1 Genbank gene 1 213 . + . ID=gene-HMPREF7215_1136;Name=HMPREF7215_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1136;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000061.1 Genbank CDS 1 213 . + 0 ID=cds-EFB90819.1;Parent=gene-HMPREF7215_1136;Dbxref=NCBI_GP:EFB90819.1;Name=EFB90819.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02882;gbkey=CDS;locus_tag=HMPREF7215_1136;partial=true;product=putative tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain protein;protein_id=EFB90819.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 400 801 . + . ID=gene-HMPREF7215_1137;Name=HMPREF7215_1137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1137 GCA_000177335.1|ADFP01000061.1 Genbank CDS 400 801 . + 0 ID=cds-EFB90820.1;Parent=gene-HMPREF7215_1137;Dbxref=NCBI_GP:EFB90820.1;Name=EFB90820.1;gbkey=CDS;locus_tag=HMPREF7215_1137;product=hypothetical protein;protein_id=EFB90820.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 820 3255 . - . ID=gene-HMPREF7215_1138;Name=HMPREF7215_1138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1138 GCA_000177335.1|ADFP01000061.1 Genbank CDS 820 3255 . - 0 ID=cds-EFB90821.1;Parent=gene-HMPREF7215_1138;Dbxref=NCBI_GP:EFB90821.1;Name=EFB90821.1;Note=identified by match to protein family HMM PF08238;gbkey=CDS;locus_tag=HMPREF7215_1138;product=Sel1 repeat protein;protein_id=EFB90821.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 3525 4874 . - . ID=gene-HMPREF7215_1139;Name=HMPREF7215_1139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1139 GCA_000177335.1|ADFP01000061.1 Genbank CDS 3525 4874 . - 0 ID=cds-EFB90822.1;Parent=gene-HMPREF7215_1139;Dbxref=NCBI_GP:EFB90822.1;Name=EFB90822.1;Note=identified by match to protein family HMM PF07670;gbkey=CDS;locus_tag=HMPREF7215_1139;product=transporter gate domain protein;protein_id=EFB90822.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 5043 5237 . - . ID=gene-HMPREF7215_1140;Name=HMPREF7215_1140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1140 GCA_000177335.1|ADFP01000061.1 Genbank CDS 5043 5237 . - 0 ID=cds-EFB90823.1;Parent=gene-HMPREF7215_1140;Dbxref=NCBI_GP:EFB90823.1;Name=EFB90823.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1140;product=hypothetical protein;protein_id=EFB90823.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 5222 6586 . + . ID=gene-HMPREF7215_1141;Name=HMPREF7215_1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1141 GCA_000177335.1|ADFP01000061.1 Genbank CDS 5222 6586 . + 0 ID=cds-EFB90824.1;Parent=gene-HMPREF7215_1141;Dbxref=NCBI_GP:EFB90824.1;Name=EFB90824.1;Note=identified by match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1141;product=amidohydrolase;protein_id=EFB90824.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 6899 7267 . + . ID=gene-HMPREF7215_1142;Name=HMPREF7215_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1142 GCA_000177335.1|ADFP01000061.1 Genbank CDS 6899 7267 . + 0 ID=cds-EFB90825.1;Parent=gene-HMPREF7215_1142;Dbxref=NCBI_GP:EFB90825.1;Name=EFB90825.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;locus_tag=HMPREF7215_1142;product=6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein;protein_id=EFB90825.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 7376 7816 . + . ID=gene-HMPREF7215_1143;Name=HMPREF7215_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1143 GCA_000177335.1|ADFP01000061.1 Genbank CDS 7376 7816 . + 0 ID=cds-EFB90826.1;Parent=gene-HMPREF7215_1143;Dbxref=NCBI_GP:EFB90826.1;Name=EFB90826.1;gbkey=CDS;locus_tag=HMPREF7215_1143;product=hypothetical protein;protein_id=EFB90826.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 7829 9067 . + . ID=gene-HMPREF7215_1144;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1144 GCA_000177335.1|ADFP01000061.1 Genbank CDS 7829 9067 . + 0 ID=cds-EFB90827.1;Parent=gene-HMPREF7215_1144;Dbxref=NCBI_GP:EFB90827.1;Name=EFB90827.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;gene=dinB;locus_tag=HMPREF7215_1144;product=putative DNA polymerase IV;protein_id=EFB90827.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 9159 10316 . - . ID=gene-HMPREF7215_1145;Name=HMPREF7215_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1145 GCA_000177335.1|ADFP01000061.1 Genbank CDS 9159 10316 . - 0 ID=cds-EFB90828.1;Parent=gene-HMPREF7215_1145;Dbxref=NCBI_GP:EFB90828.1;Name=EFB90828.1;gbkey=CDS;locus_tag=HMPREF7215_1145;product=putative sugar diacid recognition;protein_id=EFB90828.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 10455 10583 . - . ID=gene-HMPREF7215_1146;Name=HMPREF7215_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1146 GCA_000177335.1|ADFP01000061.1 Genbank CDS 10455 10583 . - 0 ID=cds-EFB90829.1;Parent=gene-HMPREF7215_1146;Dbxref=NCBI_GP:EFB90829.1;Name=EFB90829.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1146;product=hypothetical protein;protein_id=EFB90829.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 10540 11700 . + . ID=gene-HMPREF7215_1147;Name=HMPREF7215_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1147 GCA_000177335.1|ADFP01000061.1 Genbank CDS 10540 11700 . + 0 ID=cds-EFB90830.1;Parent=gene-HMPREF7215_1147;Dbxref=NCBI_GP:EFB90830.1;Name=EFB90830.1;Note=identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045;gbkey=CDS;locus_tag=HMPREF7215_1147;product=glycerate kinase;protein_id=EFB90830.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 11711 12946 . + . ID=gene-HMPREF7215_1148;Name=HMPREF7215_1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1148 GCA_000177335.1|ADFP01000061.1 Genbank CDS 11711 12946 . + 0 ID=cds-EFB90831.1;Parent=gene-HMPREF7215_1148;Dbxref=NCBI_GP:EFB90831.1;Name=EFB90831.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF7215_1148;product=citrate transporter;protein_id=EFB90831.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 12955 13122 . + . ID=gene-HMPREF7215_1149;Name=HMPREF7215_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1149 GCA_000177335.1|ADFP01000061.1 Genbank CDS 12955 13122 . + 0 ID=cds-EFB90832.1;Parent=gene-HMPREF7215_1149;Dbxref=NCBI_GP:EFB90832.1;Name=EFB90832.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1149;product=hypothetical protein;protein_id=EFB90832.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 13135 14286 . + . ID=gene-HMPREF7215_1150;Name=HMPREF7215_1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1150 GCA_000177335.1|ADFP01000061.1 Genbank CDS 13135 14286 . + 0 ID=cds-EFB90833.1;Parent=gene-HMPREF7215_1150;Dbxref=NCBI_GP:EFB90833.1;Name=EFB90833.1;Note=identified by match to protein family HMM PF04952;gbkey=CDS;locus_tag=HMPREF7215_1150;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=EFB90833.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 14320 14874 . + . ID=gene-HMPREF7215_1151;Name=HMPREF7215_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1151 GCA_000177335.1|ADFP01000061.1 Genbank CDS 14320 14874 . + 0 ID=cds-EFB90834.1;Parent=gene-HMPREF7215_1151;Dbxref=NCBI_GP:EFB90834.1;Name=EFB90834.1;gbkey=CDS;locus_tag=HMPREF7215_1151;product=hypothetical protein;protein_id=EFB90834.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 14890 16443 . + . ID=gene-HMPREF7215_1152;Name=HMPREF7215_1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1152 GCA_000177335.1|ADFP01000061.1 Genbank CDS 14890 16443 . + 0 ID=cds-EFB90835.1;Parent=gene-HMPREF7215_1152;Dbxref=NCBI_GP:EFB90835.1;Name=EFB90835.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF7215_1152;product=peptidase%2C C69 family;protein_id=EFB90835.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 16572 16745 . + . ID=gene-HMPREF7215_1153;Name=HMPREF7215_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1153 GCA_000177335.1|ADFP01000061.1 Genbank CDS 16572 16745 . + 0 ID=cds-EFB90836.1;Parent=gene-HMPREF7215_1153;Dbxref=NCBI_GP:EFB90836.1;Name=EFB90836.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1153;product=hypothetical protein;protein_id=EFB90836.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 16782 17867 . + . ID=gene-HMPREF7215_1154;Name=HMPREF7215_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1154 GCA_000177335.1|ADFP01000061.1 Genbank CDS 16782 17867 . + 0 ID=cds-EFB90837.1;Parent=gene-HMPREF7215_1154;Dbxref=NCBI_GP:EFB90837.1;Name=EFB90837.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR01409;gbkey=CDS;locus_tag=HMPREF7215_1154;product=Tat pathway signal sequence domain protein;protein_id=EFB90837.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 17880 19139 . + . ID=gene-HMPREF7215_1155;Name=HMPREF7215_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1155 GCA_000177335.1|ADFP01000061.1 Genbank CDS 17880 19139 . + 0 ID=cds-EFB90838.1;Parent=gene-HMPREF7215_1155;Dbxref=NCBI_GP:EFB90838.1;Name=EFB90838.1;gbkey=CDS;locus_tag=HMPREF7215_1155;product=hypothetical protein;protein_id=EFB90838.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 19187 19426 . + . ID=gene-HMPREF7215_1156;Name=HMPREF7215_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1156 GCA_000177335.1|ADFP01000061.1 Genbank CDS 19187 19426 . + 0 ID=cds-EFB90839.1;Parent=gene-HMPREF7215_1156;Dbxref=NCBI_GP:EFB90839.1;Name=EFB90839.1;gbkey=CDS;locus_tag=HMPREF7215_1156;product=hypothetical protein;protein_id=EFB90839.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 19438 19593 . + . ID=gene-HMPREF7215_1157;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1157 GCA_000177335.1|ADFP01000061.1 Genbank CDS 19438 19593 . + 0 ID=cds-EFB90840.1;Parent=gene-HMPREF7215_1157;Dbxref=NCBI_GP:EFB90840.1;Name=EFB90840.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;gene=tatA;locus_tag=HMPREF7215_1157;product=twin arginine-targeting protein translocase%2C TatA/E family;protein_id=EFB90840.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 19633 20382 . + . ID=gene-HMPREF7215_1158;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1158 GCA_000177335.1|ADFP01000061.1 Genbank CDS 19633 20382 . + 0 ID=cds-EFB90841.1;Parent=gene-HMPREF7215_1158;Dbxref=NCBI_GP:EFB90841.1;Name=EFB90841.1;Note=identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945;gbkey=CDS;gene=tatC;locus_tag=HMPREF7215_1158;product=twin arginine-targeting protein translocase TatC;protein_id=EFB90841.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 20575 23616 . - . ID=gene-HMPREF7215_1159;Name=HMPREF7215_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1159 GCA_000177335.1|ADFP01000061.1 Genbank CDS 20575 23616 . - 0 ID=cds-EFB90842.1;Parent=gene-HMPREF7215_1159;Dbxref=NCBI_GP:EFB90842.1;Name=EFB90842.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;locus_tag=HMPREF7215_1159;product=RND transporter%2C HAE1/HME family%2C permease protein;protein_id=EFB90842.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 23613 24785 . - . ID=gene-HMPREF7215_1160;Name=HMPREF7215_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1160 GCA_000177335.1|ADFP01000061.1 Genbank CDS 23613 24785 . - 0 ID=cds-EFB90843.1;Parent=gene-HMPREF7215_1160;Dbxref=NCBI_GP:EFB90843.1;Name=EFB90843.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF7215_1160;product=putative bacteriochlorophyll 4-vinyl reductase;protein_id=EFB90843.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 24788 24919 . - . ID=gene-HMPREF7215_1161;Name=HMPREF7215_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1161 GCA_000177335.1|ADFP01000061.1 Genbank CDS 24788 24919 . - 0 ID=cds-EFB90844.1;Parent=gene-HMPREF7215_1161;Dbxref=NCBI_GP:EFB90844.1;Name=EFB90844.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1161;product=hypothetical protein;protein_id=EFB90844.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 24870 25013 . - . ID=gene-HMPREF7215_1162;Name=HMPREF7215_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1162 GCA_000177335.1|ADFP01000061.1 Genbank CDS 24870 25013 . - 0 ID=cds-EFB90845.1;Parent=gene-HMPREF7215_1162;Dbxref=NCBI_GP:EFB90845.1;Name=EFB90845.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1162;product=hypothetical protein;protein_id=EFB90845.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 25060 27051 . - . ID=gene-HMPREF7215_1163;Name=HMPREF7215_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1163 GCA_000177335.1|ADFP01000061.1 Genbank CDS 25060 27051 . - 0 ID=cds-EFB90846.1;Parent=gene-HMPREF7215_1163;Dbxref=NCBI_GP:EFB90846.1;Name=EFB90846.1;Note=identified by match to protein family HMM PF08238;gbkey=CDS;locus_tag=HMPREF7215_1163;product=Sel1 repeat protein;protein_id=EFB90846.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 27298 28437 . - . ID=gene-HMPREF7215_1164;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1164 GCA_000177335.1|ADFP01000061.1 Genbank CDS 27298 28437 . - 0 ID=cds-EFB90847.1;Parent=gene-HMPREF7215_1164;Dbxref=NCBI_GP:EFB90847.1;Name=EFB90847.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR01975;gbkey=CDS;gene=iadA;locus_tag=HMPREF7215_1164;product=beta-aspartyl peptidase;protein_id=EFB90847.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 28438 28572 . - . ID=gene-HMPREF7215_1165;Name=HMPREF7215_1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1165 GCA_000177335.1|ADFP01000061.1 Genbank CDS 28438 28572 . - 0 ID=cds-EFB90848.1;Parent=gene-HMPREF7215_1165;Dbxref=NCBI_GP:EFB90848.1;Name=EFB90848.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1165;product=hypothetical protein;protein_id=EFB90848.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 28535 30241 . - . ID=gene-HMPREF7215_1166;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1166 GCA_000177335.1|ADFP01000061.1 Genbank CDS 28535 30241 . - 0 ID=cds-EFB90849.1;Parent=gene-HMPREF7215_1166;Dbxref=NCBI_GP:EFB90849.1;Name=EFB90849.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM TIGR00931;gbkey=CDS;gene=nhaC;locus_tag=HMPREF7215_1166;product=Na+/H+ antiporter NhaC;protein_id=EFB90849.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 30262 30969 . - . ID=gene-HMPREF7215_1167;Name=HMPREF7215_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1167 GCA_000177335.1|ADFP01000061.1 Genbank CDS 30262 30969 . - 0 ID=cds-EFB90850.1;Parent=gene-HMPREF7215_1167;Dbxref=NCBI_GP:EFB90850.1;Name=EFB90850.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1167;product=FCD domain protein;protein_id=EFB90850.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 31003 31137 . - . ID=gene-HMPREF7215_1168;Name=HMPREF7215_1168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1168 GCA_000177335.1|ADFP01000061.1 Genbank CDS 31003 31137 . - 0 ID=cds-EFB90851.1;Parent=gene-HMPREF7215_1168;Dbxref=NCBI_GP:EFB90851.1;Name=EFB90851.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1168;product=hypothetical protein;protein_id=EFB90851.1;transl_table=11 GCA_000177335.1|ADFP01000061.1 Genbank gene 31234 32359 . - . ID=gene-HMPREF7215_1169;Name=HMPREF7215_1169;end_range=32359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1169;partial=true GCA_000177335.1|ADFP01000061.1 Genbank CDS 31234 32359 . - 1 ID=cds-EFB90852.1;Parent=gene-HMPREF7215_1169;Dbxref=NCBI_GP:EFB90852.1;Name=EFB90852.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;end_range=32359,.;gbkey=CDS;locus_tag=HMPREF7215_1169;partial=true;product=MATE efflux family protein;protein_id=EFB90852.1;transl_table=11 ##sequence-region ADFP01000060.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000060.1 Genbank region 1 556 . + . ID=ADFP01000060.1:1..556;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000060.1 Genbank gene 264 556 . - . ID=gene-HMPREF7215_2497;Name=HMPREF7215_2497;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2497;partial=true GCA_000177335.1|ADFP01000060.1 Genbank CDS 264 556 . - 2 ID=cds-EFB90853.1;Parent=gene-HMPREF7215_2497;Dbxref=NCBI_GP:EFB90853.1;Name=EFB90853.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02661;end_range=556,.;gbkey=CDS;locus_tag=HMPREF7215_2497;partial=true;product=Fic family protein;protein_id=EFB90853.1;transl_table=11 ##sequence-region ADFP01000059.1 1 38674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000059.1 Genbank region 1 38674 . + . ID=ADFP01000059.1:1..38674;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000059.1 Genbank gene 1 305 . - . ID=gene-HMPREF7215_1770;Name=HMPREF7215_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1770;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000059.1 Genbank CDS 1 305 . - 0 ID=cds-EFB90854.1;Parent=gene-HMPREF7215_1770;Dbxref=NCBI_GP:EFB90854.1;Name=EFB90854.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1770;partial=true;product=hypothetical protein;protein_id=EFB90854.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 441 566 . + . ID=gene-HMPREF7215_1771;Name=HMPREF7215_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1771 GCA_000177335.1|ADFP01000059.1 Genbank CDS 441 566 . + 0 ID=cds-EFB90855.1;Parent=gene-HMPREF7215_1771;Dbxref=NCBI_GP:EFB90855.1;Name=EFB90855.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1771;product=hypothetical protein;protein_id=EFB90855.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 1288 1635 . - . ID=gene-HMPREF7215_1772;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=HMPREF7215_1772 GCA_000177335.1|ADFP01000059.1 Genbank CDS 1288 1635 . - 0 ID=cds-EFB90856.1;Parent=gene-HMPREF7215_1772;Dbxref=NCBI_GP:EFB90856.1;Name=EFB90856.1;Note=identified by match to protein family HMM PF09707%3B match to protein family HMM TIGR01873;gbkey=CDS;gene=cas2;locus_tag=HMPREF7215_1772;product=CRISPR-associated endoribonuclease Cas2;protein_id=EFB90856.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 1636 2511 . - . ID=gene-HMPREF7215_1773;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=HMPREF7215_1773 GCA_000177335.1|ADFP01000059.1 Genbank CDS 1636 2511 . - 0 ID=cds-EFB90857.1;Parent=gene-HMPREF7215_1773;Dbxref=NCBI_GP:EFB90857.1;Name=EFB90857.1;Note=identified by match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03638;gbkey=CDS;gene=cas1;locus_tag=HMPREF7215_1773;product=CRISPR-associated endonuclease Cas1;protein_id=EFB90857.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 2512 3276 . - . ID=gene-HMPREF7215_1774;Name=HMPREF7215_1774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1774 GCA_000177335.1|ADFP01000059.1 Genbank CDS 2512 3276 . - 0 ID=cds-EFB90858.1;Parent=gene-HMPREF7215_1774;Dbxref=NCBI_GP:EFB90858.1;Name=EFB90858.1;gbkey=CDS;locus_tag=HMPREF7215_1774;product=CRISPR associated protein;protein_id=EFB90858.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 3266 4075 . - . ID=gene-HMPREF7215_1775;Name=casD;gbkey=Gene;gene=casD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1775 GCA_000177335.1|ADFP01000059.1 Genbank CDS 3266 4075 . - 0 ID=cds-EFB90859.1;Parent=gene-HMPREF7215_1775;Dbxref=NCBI_GP:EFB90859.1;Name=EFB90859.1;Note=identified by match to protein family HMM PF09708%3B match to protein family HMM TIGR01868%3B match to protein family HMM TIGR02593%3B crispr-associated protein Cas5%2C ecoli subtype;gbkey=CDS;gene=casD;locus_tag=HMPREF7215_1775;product=CRISPR system CASCADE complex protein CasD;protein_id=EFB90859.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 4079 5305 . - . ID=gene-HMPREF7215_1776;Name=casC;gbkey=Gene;gene=casC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1776 GCA_000177335.1|ADFP01000059.1 Genbank CDS 4079 5305 . - 0 ID=cds-EFB90860.1;Parent=gene-HMPREF7215_1776;Dbxref=NCBI_GP:EFB90860.1;Name=EFB90860.1;Note=identified by match to protein family HMM PF09344%3B match to protein family HMM TIGR01869;gbkey=CDS;gene=casC;locus_tag=HMPREF7215_1776;product=CRISPR system CASCADE complex protein CasC;protein_id=EFB90860.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 5302 5937 . - . ID=gene-HMPREF7215_1777;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1777 GCA_000177335.1|ADFP01000059.1 Genbank CDS 5302 5937 . - 0 ID=cds-EFB90861.1;Parent=gene-HMPREF7215_1777;Dbxref=NCBI_GP:EFB90861.1;Name=EFB90861.1;Note=identified by match to protein family HMM TIGR02548;gbkey=CDS;gene=casB;locus_tag=HMPREF7215_1777;product=CRISPR system CASCADE complex protein CasB;protein_id=EFB90861.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 5938 7548 . - . ID=gene-HMPREF7215_1778;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1778 GCA_000177335.1|ADFP01000059.1 Genbank CDS 5938 7548 . - 0 ID=cds-EFB90862.1;Parent=gene-HMPREF7215_1778;Dbxref=NCBI_GP:EFB90862.1;Name=EFB90862.1;Note=identified by match to protein family HMM TIGR02547;gbkey=CDS;gene=casA;locus_tag=HMPREF7215_1778;product=CRISPR system CASCADE complex protein CasA;protein_id=EFB90862.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 7711 7848 . - . ID=gene-HMPREF7215_1779;Name=HMPREF7215_1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1779 GCA_000177335.1|ADFP01000059.1 Genbank CDS 7711 7848 . - 0 ID=cds-EFB90863.1;Parent=gene-HMPREF7215_1779;Dbxref=NCBI_GP:EFB90863.1;Name=EFB90863.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1779;product=hypothetical protein;protein_id=EFB90863.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 7845 10577 . - . ID=gene-HMPREF7215_1780;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=HMPREF7215_1780 GCA_000177335.1|ADFP01000059.1 Genbank CDS 7845 10577 . - 0 ID=cds-EFB90864.1;Parent=gene-HMPREF7215_1780;Dbxref=NCBI_GP:EFB90864.1;Name=EFB90864.1;Note=identified by match to protein family HMM TIGR01587;gbkey=CDS;gene=cas3;locus_tag=HMPREF7215_1780;product=CRISPR-associated helicase Cas3;protein_id=EFB90864.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 10823 11689 . - . ID=gene-HMPREF7215_1781;Name=HMPREF7215_1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1781 GCA_000177335.1|ADFP01000059.1 Genbank CDS 10823 11689 . - 0 ID=cds-EFB90865.1;Parent=gene-HMPREF7215_1781;Dbxref=NCBI_GP:EFB90865.1;Name=EFB90865.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1781;product=hypothetical protein;protein_id=EFB90865.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 11794 12930 . - . ID=gene-HMPREF7215_1782;Name=HMPREF7215_1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1782 GCA_000177335.1|ADFP01000059.1 Genbank CDS 11794 12930 . - 0 ID=cds-EFB90866.1;Parent=gene-HMPREF7215_1782;Dbxref=NCBI_GP:EFB90866.1;Name=EFB90866.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1782;product=hypothetical protein;protein_id=EFB90866.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 13301 13669 . - . ID=gene-HMPREF7215_1783;Name=HMPREF7215_1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1783 GCA_000177335.1|ADFP01000059.1 Genbank CDS 13301 13669 . - 0 ID=cds-EFB90867.1;Parent=gene-HMPREF7215_1783;Dbxref=NCBI_GP:EFB90867.1;Name=EFB90867.1;Note=identified by match to protein family HMM PF01325%3B match to protein family HMM PF02742;gbkey=CDS;locus_tag=HMPREF7215_1783;product=iron dependent repressor DNA binding domain protein;protein_id=EFB90867.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 13876 14370 . - . ID=gene-HMPREF7215_1784;Name=HMPREF7215_1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1784 GCA_000177335.1|ADFP01000059.1 Genbank CDS 13876 14370 . - 0 ID=cds-EFB90868.1;Parent=gene-HMPREF7215_1784;Dbxref=NCBI_GP:EFB90868.1;Name=EFB90868.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01752;gbkey=CDS;locus_tag=HMPREF7215_1784;product=flavodoxin;protein_id=EFB90868.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 14681 15025 . + . ID=gene-HMPREF7215_1785;Name=HMPREF7215_1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1785 GCA_000177335.1|ADFP01000059.1 Genbank CDS 14681 15025 . + 0 ID=cds-EFB90869.1;Parent=gene-HMPREF7215_1785;Dbxref=NCBI_GP:EFB90869.1;Name=EFB90869.1;gbkey=CDS;locus_tag=HMPREF7215_1785;product=hypothetical protein;protein_id=EFB90869.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 15771 16463 . + . ID=gene-HMPREF7215_1786;Name=HMPREF7215_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1786 GCA_000177335.1|ADFP01000059.1 Genbank CDS 15771 16463 . + 0 ID=cds-EFB90870.1;Parent=gene-HMPREF7215_1786;Dbxref=NCBI_GP:EFB90870.1;Name=EFB90870.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1786;product=hypothetical protein;protein_id=EFB90870.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 16664 17227 . - . ID=gene-HMPREF7215_1787;Name=HMPREF7215_1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1787 GCA_000177335.1|ADFP01000059.1 Genbank CDS 16664 17227 . - 0 ID=cds-EFB90871.1;Parent=gene-HMPREF7215_1787;Dbxref=NCBI_GP:EFB90871.1;Name=EFB90871.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1787;product=hypothetical protein;protein_id=EFB90871.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 17214 18383 . - . ID=gene-HMPREF7215_1788;Name=HMPREF7215_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1788 GCA_000177335.1|ADFP01000059.1 Genbank CDS 17214 18383 . - 0 ID=cds-EFB90872.1;Parent=gene-HMPREF7215_1788;Dbxref=NCBI_GP:EFB90872.1;Name=EFB90872.1;gbkey=CDS;locus_tag=HMPREF7215_1788;product=hypothetical protein;protein_id=EFB90872.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 18506 18640 . + . ID=gene-HMPREF7215_1789;Name=HMPREF7215_1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1789 GCA_000177335.1|ADFP01000059.1 Genbank CDS 18506 18640 . + 0 ID=cds-EFB90873.1;Parent=gene-HMPREF7215_1789;Dbxref=NCBI_GP:EFB90873.1;Name=EFB90873.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1789;product=hypothetical protein;protein_id=EFB90873.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 18736 19533 . + . ID=gene-HMPREF7215_1790;Name=HMPREF7215_1790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1790 GCA_000177335.1|ADFP01000059.1 Genbank CDS 18736 19533 . + 0 ID=cds-EFB90874.1;Parent=gene-HMPREF7215_1790;Dbxref=NCBI_GP:EFB90874.1;Name=EFB90874.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF7215_1790;product=metallo-beta-lactamase domain protein;protein_id=EFB90874.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 19888 20955 . + . ID=gene-HMPREF7215_1791;Name=HMPREF7215_1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1791 GCA_000177335.1|ADFP01000059.1 Genbank CDS 19888 20955 . + 0 ID=cds-EFB90875.1;Parent=gene-HMPREF7215_1791;Dbxref=NCBI_GP:EFB90875.1;Name=EFB90875.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=HMPREF7215_1791;product=ABC transporter%2C solute-binding protein;protein_id=EFB90875.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 21031 21555 . - . ID=gene-HMPREF7215_1792;Name=HMPREF7215_1792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1792 GCA_000177335.1|ADFP01000059.1 Genbank CDS 21031 21555 . - 0 ID=cds-EFB90876.1;Parent=gene-HMPREF7215_1792;Dbxref=NCBI_GP:EFB90876.1;Name=EFB90876.1;gbkey=CDS;locus_tag=HMPREF7215_1792;product=hypothetical protein;protein_id=EFB90876.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 21641 22603 . - . ID=gene-HMPREF7215_1793;Name=HMPREF7215_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1793 GCA_000177335.1|ADFP01000059.1 Genbank CDS 21641 22603 . - 0 ID=cds-EFB90877.1;Parent=gene-HMPREF7215_1793;Dbxref=NCBI_GP:EFB90877.1;Name=EFB90877.1;gbkey=CDS;locus_tag=HMPREF7215_1793;product=hypothetical protein;protein_id=EFB90877.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 22684 23253 . + . ID=gene-HMPREF7215_1794;Name=HMPREF7215_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1794 GCA_000177335.1|ADFP01000059.1 Genbank CDS 22684 23253 . + 0 ID=cds-EFB90878.1;Parent=gene-HMPREF7215_1794;Dbxref=NCBI_GP:EFB90878.1;Name=EFB90878.1;Note=identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440;gbkey=CDS;locus_tag=HMPREF7215_1794;product=TIGR01440 family protein;protein_id=EFB90878.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 23404 25875 . + . ID=gene-HMPREF7215_1795;Name=HMPREF7215_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1795 GCA_000177335.1|ADFP01000059.1 Genbank CDS 23404 25875 . + 0 ID=cds-EFB90879.1;Parent=gene-HMPREF7215_1795;Dbxref=NCBI_GP:EFB90879.1;Name=EFB90879.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM TIGR01587;gbkey=CDS;locus_tag=HMPREF7215_1795;product=CRISPR-associated endonuclease Cas3-HD;protein_id=EFB90879.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 25906 26640 . + . ID=gene-HMPREF7215_1796;Name=cas5d;gbkey=Gene;gene=cas5d;gene_biotype=protein_coding;locus_tag=HMPREF7215_1796 GCA_000177335.1|ADFP01000059.1 Genbank CDS 25906 26640 . + 0 ID=cds-EFB90880.1;Parent=gene-HMPREF7215_1796;Dbxref=NCBI_GP:EFB90880.1;Name=EFB90880.1;Note=identified by match to protein family HMM PF09704%3B match to protein family HMM TIGR01876%3B match to protein family HMM TIGR02593%3B crispr-associated protein Cas5%2C dvulg subtype;gbkey=CDS;gene=cas5d;locus_tag=HMPREF7215_1796;product=CRISPR-associated protein Cas5%2C Dvulg subtype;protein_id=EFB90880.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 26637 28712 . + . ID=gene-HMPREF7215_1797;Name=csd1;gbkey=Gene;gene=csd1;gene_biotype=protein_coding;locus_tag=HMPREF7215_1797 GCA_000177335.1|ADFP01000059.1 Genbank CDS 26637 28712 . + 0 ID=cds-EFB90881.1;Parent=gene-HMPREF7215_1797;Dbxref=NCBI_GP:EFB90881.1;Name=EFB90881.1;Note=identified by match to protein family HMM PF09709%3B match to protein family HMM TIGR01863;gbkey=CDS;gene=csd1;locus_tag=HMPREF7215_1797;product=CRISPR-associated protein%2C Csd1 family;protein_id=EFB90881.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 28733 29599 . + . ID=gene-HMPREF7215_1798;Name=HMPREF7215_1798;Note=csd2;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1798 GCA_000177335.1|ADFP01000059.1 Genbank CDS 28733 29599 . + 0 ID=cds-EFB90882.1;Parent=gene-HMPREF7215_1798;Dbxref=NCBI_GP:EFB90882.1;Name=EFB90882.1;Note=identified by match to protein family HMM PF05107%3B match to protein family HMM TIGR01595%3B match to protein family HMM TIGR02589;gbkey=CDS;locus_tag=HMPREF7215_1798;product=hypothetical protein;protein_id=EFB90882.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 29601 30254 . + . ID=gene-HMPREF7215_1799;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=HMPREF7215_1799 GCA_000177335.1|ADFP01000059.1 Genbank CDS 29601 30254 . + 0 ID=cds-EFB90883.1;Parent=gene-HMPREF7215_1799;Dbxref=NCBI_GP:EFB90883.1;Name=EFB90883.1;Note=identified by match to protein family HMM PF01930%3B match to protein family HMM TIGR00372;gbkey=CDS;gene=cas4;locus_tag=HMPREF7215_1799;product=CRISPR-associated protein Cas4;protein_id=EFB90883.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 30251 31282 . + . ID=gene-HMPREF7215_1800;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=HMPREF7215_1800 GCA_000177335.1|ADFP01000059.1 Genbank CDS 30251 31282 . + 0 ID=cds-EFB90884.1;Parent=gene-HMPREF7215_1800;Dbxref=NCBI_GP:EFB90884.1;Name=EFB90884.1;Note=identified by match to protein family HMM PF01867%3B match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03640;gbkey=CDS;gene=cas1;locus_tag=HMPREF7215_1800;product=CRISPR-associated endonuclease Cas1%2C DVULG subtype;protein_id=EFB90884.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 31292 31582 . + . ID=gene-HMPREF7215_1801;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=HMPREF7215_1801 GCA_000177335.1|ADFP01000059.1 Genbank CDS 31292 31582 . + 0 ID=cds-EFB90885.1;Parent=gene-HMPREF7215_1801;Dbxref=NCBI_GP:EFB90885.1;Name=EFB90885.1;Note=identified by match to protein family HMM TIGR01573;gbkey=CDS;gene=cas2;locus_tag=HMPREF7215_1801;product=CRISPR-associated endoribonuclease Cas2;protein_id=EFB90885.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 32308 32421 . + . ID=gene-HMPREF7215_1802;Name=HMPREF7215_1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1802 GCA_000177335.1|ADFP01000059.1 Genbank CDS 32308 32421 . + 0 ID=cds-EFB90886.1;Parent=gene-HMPREF7215_1802;Dbxref=NCBI_GP:EFB90886.1;Name=EFB90886.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1802;product=hypothetical protein;protein_id=EFB90886.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 32536 32694 . - . ID=gene-HMPREF7215_1803;Name=HMPREF7215_1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1803 GCA_000177335.1|ADFP01000059.1 Genbank CDS 32536 32694 . - 0 ID=cds-EFB90887.1;Parent=gene-HMPREF7215_1803;Dbxref=NCBI_GP:EFB90887.1;Name=EFB90887.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1803;product=hypothetical protein;protein_id=EFB90887.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 32762 33124 . + . ID=gene-HMPREF7215_1804;Name=HMPREF7215_1804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1804 GCA_000177335.1|ADFP01000059.1 Genbank CDS 32762 33124 . + 0 ID=cds-EFB90888.1;Parent=gene-HMPREF7215_1804;Dbxref=NCBI_GP:EFB90888.1;Name=EFB90888.1;gbkey=CDS;locus_tag=HMPREF7215_1804;product=hypothetical protein;protein_id=EFB90888.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 33337 33813 . + . ID=gene-HMPREF7215_1805;Name=HMPREF7215_1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1805 GCA_000177335.1|ADFP01000059.1 Genbank CDS 33337 33813 . + 0 ID=cds-EFB90889.1;Parent=gene-HMPREF7215_1805;Dbxref=NCBI_GP:EFB90889.1;Name=EFB90889.1;Note=identified by match to protein family HMM PF08291;gbkey=CDS;locus_tag=HMPREF7215_1805;product=peptidase M15;protein_id=EFB90889.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 34118 35380 . - . ID=gene-HMPREF7215_1806;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=HMPREF7215_1806 GCA_000177335.1|ADFP01000059.1 Genbank CDS 34118 35380 . - 0 ID=cds-EFB90890.1;Parent=gene-HMPREF7215_1806;Dbxref=NCBI_GP:EFB90890.1;Name=EFB90890.1;Note=identified by match to protein family HMM PF03616%3B match to protein family HMM TIGR00210;gbkey=CDS;gene=gltS;locus_tag=HMPREF7215_1806;product=sodium/glutamate symporter;protein_id=EFB90890.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 35380 35700 . + . ID=gene-HMPREF7215_1807;Name=HMPREF7215_1807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1807 GCA_000177335.1|ADFP01000059.1 Genbank CDS 35380 35700 . + 0 ID=cds-EFB90891.1;Parent=gene-HMPREF7215_1807;Dbxref=NCBI_GP:EFB90891.1;Name=EFB90891.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1807;product=hypothetical protein;protein_id=EFB90891.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 35700 36977 . + . ID=gene-HMPREF7215_1808;Name=HMPREF7215_1808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1808 GCA_000177335.1|ADFP01000059.1 Genbank CDS 35700 36977 . + 0 ID=cds-EFB90892.1;Parent=gene-HMPREF7215_1808;Dbxref=NCBI_GP:EFB90892.1;Name=EFB90892.1;Note=identified by match to protein family HMM PF01979;gbkey=CDS;locus_tag=HMPREF7215_1808;product=amidohydrolase family protein;protein_id=EFB90892.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 37048 37962 . + . ID=gene-HMPREF7215_1809;Name=ftcD;gbkey=Gene;gene=ftcD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1809 GCA_000177335.1|ADFP01000059.1 Genbank CDS 37048 37962 . + 0 ID=cds-EFB90893.1;Parent=gene-HMPREF7215_1809;Dbxref=NCBI_GP:EFB90893.1;Name=EFB90893.1;Note=identified by match to protein family HMM PF02971%3B match to protein family HMM PF07837%3B match to protein family HMM TIGR02024;gbkey=CDS;gene=ftcD;locus_tag=HMPREF7215_1809;product=glutamate formimidoyltransferase;protein_id=EFB90893.1;transl_table=11 GCA_000177335.1|ADFP01000059.1 Genbank gene 37977 38606 . + . ID=gene-HMPREF7215_1810;Name=fchA;gbkey=Gene;gene=fchA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1810 GCA_000177335.1|ADFP01000059.1 Genbank CDS 37977 38606 . + 0 ID=cds-EFB90894.1;Parent=gene-HMPREF7215_1810;Dbxref=NCBI_GP:EFB90894.1;Name=EFB90894.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04961;gbkey=CDS;gene=fchA;locus_tag=HMPREF7215_1810;product=methenyltetrahydrofolate cyclohydrolase;protein_id=EFB90894.1;transl_table=11 ##sequence-region ADFP01000058.1 1 3536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000058.1 Genbank region 1 3536 . + . ID=ADFP01000058.1:1..3536;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000058.1 Genbank gene 1 293 . + . ID=gene-HMPREF7215_0591;Name=HMPREF7215_0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0591;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000058.1 Genbank CDS 1 293 . + 2 ID=cds-EFB90895.1;Parent=gene-HMPREF7215_0591;Dbxref=NCBI_GP:EFB90895.1;Name=EFB90895.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0591;partial=true;product=Fic family protein;protein_id=EFB90895.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000058.1 Genbank gene 363 632 . + . ID=gene-HMPREF7215_0592;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0592 GCA_000177335.1|ADFP01000058.1 Genbank CDS 363 632 . + 0 ID=cds-EFB90896.1;Parent=gene-HMPREF7215_0592;Dbxref=NCBI_GP:EFB90896.1;Name=EFB90896.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;gene=dinJ;locus_tag=HMPREF7215_0592;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB90896.1;transl_table=11 GCA_000177335.1|ADFP01000058.1 Genbank gene 762 3347 . - . ID=gene-HMPREF7215_0593;Name=HMPREF7215_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0593 GCA_000177335.1|ADFP01000058.1 Genbank CDS 762 3347 . - 0 ID=cds-EFB90897.1;Parent=gene-HMPREF7215_0593;Dbxref=NCBI_GP:EFB90897.1;Name=EFB90897.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0593;product=putative phage tail tape measure protein%2C lambda family;protein_id=EFB90897.1;transl_table=11 ##sequence-region ADFP01000057.1 1 1106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000057.1 Genbank region 1 1106 . + . ID=ADFP01000057.1:1..1106;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000057.1 Genbank gene 11 1106 . + . ID=gene-HMPREF7215_1666;Name=HMPREF7215_1666;end_range=1106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1666;partial=true GCA_000177335.1|ADFP01000057.1 Genbank CDS 11 1106 . + 0 ID=cds-EFB90898.1;Parent=gene-HMPREF7215_1666;Dbxref=NCBI_GP:EFB90898.1;Name=EFB90898.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00035;end_range=1106,.;gbkey=CDS;locus_tag=HMPREF7215_1666;partial=true;product=hypothetical protein;protein_id=EFB90898.1;transl_table=11 ##sequence-region ADFP01000056.1 1 20613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000056.1 Genbank region 1 20613 . + . ID=ADFP01000056.1:1..20613;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000056.1 Genbank gene 42 173 . + . ID=gene-HMPREF7215_2382;Name=HMPREF7215_2382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2382 GCA_000177335.1|ADFP01000056.1 Genbank CDS 42 173 . + 0 ID=cds-EFB90899.1;Parent=gene-HMPREF7215_2382;Dbxref=NCBI_GP:EFB90899.1;Name=EFB90899.1;gbkey=CDS;locus_tag=HMPREF7215_2382;product=hypothetical protein;protein_id=EFB90899.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 178 1629 . + . ID=gene-HMPREF7215_2383;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2383 GCA_000177335.1|ADFP01000056.1 Genbank CDS 178 1629 . + 0 ID=cds-EFB90900.1;Parent=gene-HMPREF7215_2383;Dbxref=NCBI_GP:EFB90900.1;Name=EFB90900.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00590%3B match to protein family HMM PF02602%3B match to protein family HMM TIGR01469;gbkey=CDS;gene=cobA;locus_tag=HMPREF7215_2383;product=uroporphyrinogen-III C-methyltransferase;protein_id=EFB90900.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 1626 2606 . + . ID=gene-HMPREF7215_2384;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2384 GCA_000177335.1|ADFP01000056.1 Genbank CDS 1626 2606 . + 0 ID=cds-EFB90901.1;Parent=gene-HMPREF7215_2384;Dbxref=NCBI_GP:EFB90901.1;Name=EFB90901.1;Note=identified by match to protein family HMM PF00490;gbkey=CDS;gene=hemB;locus_tag=HMPREF7215_2384;product=porphobilinogen synthase;protein_id=EFB90901.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 2793 4172 . + . ID=gene-HMPREF7215_2385;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2385 GCA_000177335.1|ADFP01000056.1 Genbank CDS 2793 4172 . + 0 ID=cds-EFB90902.1;Parent=gene-HMPREF7215_2385;Dbxref=NCBI_GP:EFB90902.1;Name=EFB90902.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379;gbkey=CDS;gene=cobB;locus_tag=HMPREF7215_2385;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=EFB90902.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 4238 5110 . - . ID=gene-HMPREF7215_2386;Name=HMPREF7215_2386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2386 GCA_000177335.1|ADFP01000056.1 Genbank CDS 4238 5110 . - 0 ID=cds-EFB90903.1;Parent=gene-HMPREF7215_2386;Dbxref=NCBI_GP:EFB90903.1;Name=EFB90903.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;locus_tag=HMPREF7215_2386;product=transcriptional regulator%2C RpiR family;protein_id=EFB90903.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 5097 5210 . - . ID=gene-HMPREF7215_2387;Name=HMPREF7215_2387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2387 GCA_000177335.1|ADFP01000056.1 Genbank CDS 5097 5210 . - 0 ID=cds-EFB90904.1;Parent=gene-HMPREF7215_2387;Dbxref=NCBI_GP:EFB90904.1;Name=EFB90904.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2387;product=hypothetical protein;protein_id=EFB90904.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 5312 6316 . - . ID=gene-HMPREF7215_2388;Name=HMPREF7215_2388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2388 GCA_000177335.1|ADFP01000056.1 Genbank CDS 5312 6316 . - 0 ID=cds-EFB90905.1;Parent=gene-HMPREF7215_2388;Dbxref=NCBI_GP:EFB90905.1;Name=EFB90905.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2388;product=hypothetical protein;protein_id=EFB90905.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 6356 6811 . - . ID=gene-HMPREF7215_2389;Name=HMPREF7215_2389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2389 GCA_000177335.1|ADFP01000056.1 Genbank CDS 6356 6811 . - 0 ID=cds-EFB90906.1;Parent=gene-HMPREF7215_2389;Dbxref=NCBI_GP:EFB90906.1;Name=EFB90906.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2389;product=hypothetical protein;protein_id=EFB90906.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 6783 7166 . - . ID=gene-HMPREF7215_2390;Name=HMPREF7215_2390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2390 GCA_000177335.1|ADFP01000056.1 Genbank CDS 6783 7166 . - 0 ID=cds-EFB90907.1;Parent=gene-HMPREF7215_2390;Dbxref=NCBI_GP:EFB90907.1;Name=EFB90907.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF7215_2390;product=DNA-binding helix-turn-helix protein;protein_id=EFB90907.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 7316 8209 . + . ID=gene-HMPREF7215_2391;Name=HMPREF7215_2391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2391 GCA_000177335.1|ADFP01000056.1 Genbank CDS 7316 8209 . + 0 ID=cds-EFB90908.1;Parent=gene-HMPREF7215_2391;Dbxref=NCBI_GP:EFB90908.1;Name=EFB90908.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2391;product=LysR substrate binding domain protein;protein_id=EFB90908.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 8383 9942 . - . ID=gene-HMPREF7215_2392;Name=HMPREF7215_2392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2392 GCA_000177335.1|ADFP01000056.1 Genbank CDS 8383 9942 . - 0 ID=cds-EFB90909.1;Parent=gene-HMPREF7215_2392;Dbxref=NCBI_GP:EFB90909.1;Name=EFB90909.1;Note=identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_2392;product=ABC transporter%2C permease protein;protein_id=EFB90909.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 9992 11557 . - . ID=gene-HMPREF7215_2393;Name=HMPREF7215_2393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2393 GCA_000177335.1|ADFP01000056.1 Genbank CDS 9992 11557 . - 0 ID=cds-EFB90910.1;Parent=gene-HMPREF7215_2393;Dbxref=NCBI_GP:EFB90910.1;Name=EFB90910.1;Note=identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_2393;product=ABC transporter%2C permease protein;protein_id=EFB90910.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 11557 12357 . - . ID=gene-HMPREF7215_2394;Name=HMPREF7215_2394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2394 GCA_000177335.1|ADFP01000056.1 Genbank CDS 11557 12357 . - 0 ID=cds-EFB90911.1;Parent=gene-HMPREF7215_2394;Dbxref=NCBI_GP:EFB90911.1;Name=EFB90911.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2394;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90911.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 12837 13583 . + . ID=gene-HMPREF7215_2395;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2395 GCA_000177335.1|ADFP01000056.1 Genbank CDS 12837 13583 . + 0 ID=cds-EFB90912.1;Parent=gene-HMPREF7215_2395;Dbxref=NCBI_GP:EFB90912.1;Name=EFB90912.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978;gbkey=CDS;gene=sufC;locus_tag=HMPREF7215_2395;product=FeS assembly ATPase SufC;protein_id=EFB90912.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 13580 14998 . + . ID=gene-HMPREF7215_2396;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2396 GCA_000177335.1|ADFP01000056.1 Genbank CDS 13580 14998 . + 0 ID=cds-EFB90913.1;Parent=gene-HMPREF7215_2396;Dbxref=NCBI_GP:EFB90913.1;Name=EFB90913.1;Note=identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980;gbkey=CDS;gene=sufB;locus_tag=HMPREF7215_2396;product=FeS assembly protein SufB;protein_id=EFB90913.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 15014 16072 . + . ID=gene-HMPREF7215_2397;Name=HMPREF7215_2397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2397 GCA_000177335.1|ADFP01000056.1 Genbank CDS 15014 16072 . + 0 ID=cds-EFB90914.1;Parent=gene-HMPREF7215_2397;Dbxref=NCBI_GP:EFB90914.1;Name=EFB90914.1;Note=identified by match to protein family HMM PF01458;gbkey=CDS;locus_tag=HMPREF7215_2397;product=SufB/sufD domain protein;protein_id=EFB90914.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 16065 17306 . + . ID=gene-HMPREF7215_2398;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2398 GCA_000177335.1|ADFP01000056.1 Genbank CDS 16065 17306 . + 0 ID=cds-EFB90915.1;Parent=gene-HMPREF7215_2398;Dbxref=NCBI_GP:EFB90915.1;Name=EFB90915.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979;gbkey=CDS;gene=sufS;locus_tag=HMPREF7215_2398;product=cysteine desulfurase%2C SufS subfamily;protein_id=EFB90915.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 17296 17742 . + . ID=gene-HMPREF7215_2399;Name=HMPREF7215_2399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2399 GCA_000177335.1|ADFP01000056.1 Genbank CDS 17296 17742 . + 0 ID=cds-EFB90916.1;Parent=gene-HMPREF7215_2399;Dbxref=NCBI_GP:EFB90916.1;Name=EFB90916.1;Note=identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994;gbkey=CDS;locus_tag=HMPREF7215_2399;product=SUF system FeS assembly protein%2C NifU family;protein_id=EFB90916.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 17915 19000 . + . ID=gene-HMPREF7215_2400;Name=HMPREF7215_2400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2400 GCA_000177335.1|ADFP01000056.1 Genbank CDS 17915 19000 . + 0 ID=cds-EFB90917.1;Parent=gene-HMPREF7215_2400;Dbxref=NCBI_GP:EFB90917.1;Name=EFB90917.1;Note=identified by match to protein family HMM PF01156;gbkey=CDS;locus_tag=HMPREF7215_2400;product=Inosine-uridine preferring nucleoside hydrolase;protein_id=EFB90917.1;transl_table=11 GCA_000177335.1|ADFP01000056.1 Genbank gene 19157 20572 . + . ID=gene-HMPREF7215_2401;Name=HMPREF7215_2401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2401 GCA_000177335.1|ADFP01000056.1 Genbank CDS 19157 20572 . + 0 ID=cds-EFB90918.1;Parent=gene-HMPREF7215_2401;Dbxref=NCBI_GP:EFB90918.1;Name=EFB90918.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02127%3B match to protein family HMM PF05343;gbkey=CDS;locus_tag=HMPREF7215_2401;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EFB90918.1;transl_table=11 ##sequence-region ADFP01000055.1 1 27187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000055.1 Genbank region 1 27187 . + . ID=ADFP01000055.1:1..27187;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000055.1 Genbank gene 20 424 . + . ID=gene-HMPREF7215_2638;Name=HMPREF7215_2638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2638 GCA_000177335.1|ADFP01000055.1 Genbank CDS 20 424 . + 0 ID=cds-EFB90919.1;Parent=gene-HMPREF7215_2638;Dbxref=NCBI_GP:EFB90919.1;Name=EFB90919.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2638;product=hypothetical protein;protein_id=EFB90919.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 421 1341 . + . ID=gene-HMPREF7215_2639;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2639 GCA_000177335.1|ADFP01000055.1 Genbank CDS 421 1341 . + 0 ID=cds-EFB90920.1;Parent=gene-HMPREF7215_2639;Dbxref=NCBI_GP:EFB90920.1;Name=EFB90920.1;Note=identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083;gbkey=CDS;gene=ribF;locus_tag=HMPREF7215_2639;product=riboflavin biosynthesis protein RibF;protein_id=EFB90920.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 1365 1481 . - . ID=gene-HMPREF7215_2640;Name=HMPREF7215_2640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2640 GCA_000177335.1|ADFP01000055.1 Genbank CDS 1365 1481 . - 0 ID=cds-EFB90921.1;Parent=gene-HMPREF7215_2640;Dbxref=NCBI_GP:EFB90921.1;Name=EFB90921.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2640;product=hypothetical protein;protein_id=EFB90921.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 1625 2287 . + . ID=gene-HMPREF7215_2641;Name=HMPREF7215_2641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2641 GCA_000177335.1|ADFP01000055.1 Genbank CDS 1625 2287 . + 0 ID=cds-EFB90922.1;Parent=gene-HMPREF7215_2641;Dbxref=NCBI_GP:EFB90922.1;Name=EFB90922.1;gbkey=CDS;locus_tag=HMPREF7215_2641;product=hypothetical protein;protein_id=EFB90922.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 2275 2910 . + . ID=gene-HMPREF7215_2642;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=HMPREF7215_2642 GCA_000177335.1|ADFP01000055.1 Genbank CDS 2275 2910 . + 0 ID=cds-EFB90923.1;Parent=gene-HMPREF7215_2642;Dbxref=NCBI_GP:EFB90923.1;Name=EFB90923.1;Note=identified by match to protein family HMM PF03352;gbkey=CDS;gene=tag;locus_tag=HMPREF7215_2642;product=DNA-3-methyladenine glycosylase I;protein_id=EFB90923.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 2976 3054 . + . ID=gene-HMPREF7215_2643;Name=HMPREF7215_2643;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2643 GCA_000177335.1|ADFP01000055.1 Genbank tRNA 2976 3054 . + . ID=rna-HMPREF7215_2643;Parent=gene-HMPREF7215_2643;gbkey=tRNA;locus_tag=HMPREF7215_2643;product=tRNA-Arg GCA_000177335.1|ADFP01000055.1 Genbank exon 2976 3054 . + . ID=exon-HMPREF7215_2643-1;Parent=rna-HMPREF7215_2643;gbkey=tRNA;locus_tag=HMPREF7215_2643;product=tRNA-Arg GCA_000177335.1|ADFP01000055.1 Genbank gene 3155 4096 . - . ID=gene-HMPREF7215_2644;Name=HMPREF7215_2644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2644 GCA_000177335.1|ADFP01000055.1 Genbank CDS 3155 4096 . - 0 ID=cds-EFB90924.1;Parent=gene-HMPREF7215_2644;Dbxref=NCBI_GP:EFB90924.1;Name=EFB90924.1;Note=identified by match to protein family HMM PF04198;gbkey=CDS;locus_tag=HMPREF7215_2644;product=putative sugar-binding domain protein;protein_id=EFB90924.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 4219 4545 . - . ID=gene-HMPREF7215_2645;Name=HMPREF7215_2645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2645 GCA_000177335.1|ADFP01000055.1 Genbank CDS 4219 4545 . - 0 ID=cds-EFB90925.1;Parent=gene-HMPREF7215_2645;Dbxref=NCBI_GP:EFB90925.1;Name=EFB90925.1;gbkey=CDS;locus_tag=HMPREF7215_2645;product=hypothetical protein;protein_id=EFB90925.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 4568 4690 . - . ID=gene-HMPREF7215_2646;Name=HMPREF7215_2646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2646 GCA_000177335.1|ADFP01000055.1 Genbank CDS 4568 4690 . - 0 ID=cds-EFB90926.1;Parent=gene-HMPREF7215_2646;Dbxref=NCBI_GP:EFB90926.1;Name=EFB90926.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_2646;product=hypothetical protein;protein_id=EFB90926.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 4724 5446 . - . ID=gene-HMPREF7215_2647;Name=HMPREF7215_2647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2647 GCA_000177335.1|ADFP01000055.1 Genbank CDS 4724 5446 . - 0 ID=cds-EFB90927.1;Parent=gene-HMPREF7215_2647;Dbxref=NCBI_GP:EFB90927.1;Name=EFB90927.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01791;gbkey=CDS;locus_tag=HMPREF7215_2647;product=fructose-bisphosphate aldolase;protein_id=EFB90927.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 5455 6048 . - . ID=gene-HMPREF7215_2648;Name=HMPREF7215_2648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2648 GCA_000177335.1|ADFP01000055.1 Genbank CDS 5455 6048 . - 0 ID=cds-EFB90928.1;Parent=gene-HMPREF7215_2648;Dbxref=NCBI_GP:EFB90928.1;Name=EFB90928.1;gbkey=CDS;locus_tag=HMPREF7215_2648;product=DAK1 domain protein;protein_id=EFB90928.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 6073 7116 . + . ID=gene-HMPREF7215_2649;Name=HMPREF7215_2649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2649 GCA_000177335.1|ADFP01000055.1 Genbank CDS 6073 7116 . + 0 ID=cds-EFB90929.1;Parent=gene-HMPREF7215_2649;Dbxref=NCBI_GP:EFB90929.1;Name=EFB90929.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;locus_tag=HMPREF7215_2649;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB90929.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 7130 7615 . + . ID=gene-HMPREF7215_2650;Name=HMPREF7215_2650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2650 GCA_000177335.1|ADFP01000055.1 Genbank CDS 7130 7615 . + 0 ID=cds-EFB90930.1;Parent=gene-HMPREF7215_2650;Dbxref=NCBI_GP:EFB90930.1;Name=EFB90930.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04290;gbkey=CDS;locus_tag=HMPREF7215_2650;product=TRAP transporter%2C DctQ-like membrane protein;protein_id=EFB90930.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 7612 8904 . + . ID=gene-HMPREF7215_2652;Name=HMPREF7215_2652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2652 GCA_000177335.1|ADFP01000055.1 Genbank CDS 7612 8904 . + 0 ID=cds-EFB90931.1;Parent=gene-HMPREF7215_2652;Dbxref=NCBI_GP:EFB90931.1;Name=EFB90931.1;Note=identified by match to protein family HMM PF03606%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_2652;product=TRAP transporter%2C DctM subunit;protein_id=EFB90931.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 8877 9092 . - . ID=gene-HMPREF7215_2651;Name=HMPREF7215_2651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2651 GCA_000177335.1|ADFP01000055.1 Genbank CDS 8877 9092 . - 0 ID=cds-EFB90932.1;Parent=gene-HMPREF7215_2651;Dbxref=NCBI_GP:EFB90932.1;Name=EFB90932.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2651;product=hypothetical protein;protein_id=EFB90932.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 9060 9827 . + . ID=gene-HMPREF7215_2653;Name=HMPREF7215_2653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2653 GCA_000177335.1|ADFP01000055.1 Genbank CDS 9060 9827 . + 0 ID=cds-EFB90933.1;Parent=gene-HMPREF7215_2653;Dbxref=NCBI_GP:EFB90933.1;Name=EFB90933.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2653;product=ABC transporter%2C ATP-binding protein;protein_id=EFB90933.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 9828 10481 . + . ID=gene-HMPREF7215_2654;Name=HMPREF7215_2654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2654 GCA_000177335.1|ADFP01000055.1 Genbank CDS 9828 10481 . + 0 ID=cds-EFB90934.1;Parent=gene-HMPREF7215_2654;Dbxref=NCBI_GP:EFB90934.1;Name=EFB90934.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF7215_2654;product=ABC transporter%2C permease protein;protein_id=EFB90934.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 10580 11467 . - . ID=gene-HMPREF7215_2655;Name=HMPREF7215_2655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2655 GCA_000177335.1|ADFP01000055.1 Genbank CDS 10580 11467 . - 0 ID=cds-EFB90935.1;Parent=gene-HMPREF7215_2655;Dbxref=NCBI_GP:EFB90935.1;Name=EFB90935.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF7215_2655;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EFB90935.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 11469 12746 . - . ID=gene-HMPREF7215_2656;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2656 GCA_000177335.1|ADFP01000055.1 Genbank CDS 11469 12746 . - 0 ID=cds-EFB90936.1;Parent=gene-HMPREF7215_2656;Dbxref=NCBI_GP:EFB90936.1;Name=EFB90936.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS;locus_tag=HMPREF7215_2656;product=tyrosine--tRNA ligase;protein_id=EFB90936.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 12857 12979 . + . ID=gene-HMPREF7215_2657;Name=HMPREF7215_2657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2657 GCA_000177335.1|ADFP01000055.1 Genbank CDS 12857 12979 . + 0 ID=cds-EFB90937.1;Parent=gene-HMPREF7215_2657;Dbxref=NCBI_GP:EFB90937.1;Name=EFB90937.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2657;product=hypothetical protein;protein_id=EFB90937.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 13013 14281 . + . ID=gene-HMPREF7215_2658;Name=HMPREF7215_2658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2658 GCA_000177335.1|ADFP01000055.1 Genbank CDS 13013 14281 . + 0 ID=cds-EFB90938.1;Parent=gene-HMPREF7215_2658;Dbxref=NCBI_GP:EFB90938.1;Name=EFB90938.1;gbkey=CDS;locus_tag=HMPREF7215_2658;product=hypothetical protein;protein_id=EFB90938.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 14419 14982 . + . ID=gene-HMPREF7215_2659;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2659 GCA_000177335.1|ADFP01000055.1 Genbank CDS 14419 14982 . + 0 ID=cds-EFB90939.1;Parent=gene-HMPREF7215_2659;Dbxref=NCBI_GP:EFB90939.1;Name=EFB90939.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137;gbkey=CDS;gene=ahpC;locus_tag=HMPREF7215_2659;product=peroxiredoxin;protein_id=EFB90939.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 14983 16629 . + . ID=gene-HMPREF7215_2660;Name=HMPREF7215_2660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2660 GCA_000177335.1|ADFP01000055.1 Genbank CDS 14983 16629 . + 0 ID=cds-EFB90940.1;Parent=gene-HMPREF7215_2660;Dbxref=NCBI_GP:EFB90940.1;Name=EFB90940.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF04820%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_2660;product=putative thioredoxin-disulfide reductase;protein_id=EFB90940.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 16686 16823 . - . ID=gene-HMPREF7215_2661;Name=HMPREF7215_2661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2661 GCA_000177335.1|ADFP01000055.1 Genbank CDS 16686 16823 . - 0 ID=cds-EFB90941.1;Parent=gene-HMPREF7215_2661;Dbxref=NCBI_GP:EFB90941.1;Name=EFB90941.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2661;product=hypothetical protein;protein_id=EFB90941.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 16926 17174 . + . ID=gene-HMPREF7215_2662;Name=HMPREF7215_2662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2662 GCA_000177335.1|ADFP01000055.1 Genbank CDS 16926 17174 . + 0 ID=cds-EFB90942.1;Parent=gene-HMPREF7215_2662;Dbxref=NCBI_GP:EFB90942.1;Name=EFB90942.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2662;product=hypothetical protein;protein_id=EFB90942.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 17181 18656 . + . ID=gene-HMPREF7215_2663;Name=HMPREF7215_2663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2663 GCA_000177335.1|ADFP01000055.1 Genbank CDS 17181 18656 . + 0 ID=cds-EFB90943.1;Parent=gene-HMPREF7215_2663;Dbxref=NCBI_GP:EFB90943.1;Name=EFB90943.1;Note=identified by match to protein family HMM PF00474;gbkey=CDS;locus_tag=HMPREF7215_2663;product=transporter%2C SSS family;protein_id=EFB90943.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 18738 19523 . + . ID=gene-HMPREF7215_2664;Name=HMPREF7215_2664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2664 GCA_000177335.1|ADFP01000055.1 Genbank CDS 18738 19523 . + 0 ID=cds-EFB90944.1;Parent=gene-HMPREF7215_2664;Dbxref=NCBI_GP:EFB90944.1;Name=EFB90944.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;locus_tag=HMPREF7215_2664;product=creatininase;protein_id=EFB90944.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 19717 20913 . - . ID=gene-HMPREF7215_2665;Name=HMPREF7215_2665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2665 GCA_000177335.1|ADFP01000055.1 Genbank CDS 19717 20913 . - 0 ID=cds-EFB90945.1;Parent=gene-HMPREF7215_2665;Dbxref=NCBI_GP:EFB90945.1;Name=EFB90945.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF7215_2665;product=Ser/Thr phosphatase family protein;protein_id=EFB90945.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 21038 21163 . - . ID=gene-HMPREF7215_2666;Name=HMPREF7215_2666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2666 GCA_000177335.1|ADFP01000055.1 Genbank CDS 21038 21163 . - 0 ID=cds-EFB90946.1;Parent=gene-HMPREF7215_2666;Dbxref=NCBI_GP:EFB90946.1;Name=EFB90946.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2666;product=hypothetical protein;protein_id=EFB90946.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 21205 21630 . + . ID=gene-HMPREF7215_2667;Name=HMPREF7215_2667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2667 GCA_000177335.1|ADFP01000055.1 Genbank CDS 21205 21630 . + 0 ID=cds-EFB90947.1;Parent=gene-HMPREF7215_2667;Dbxref=NCBI_GP:EFB90947.1;Name=EFB90947.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF7215_2667;product=outer membrane protein;protein_id=EFB90947.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 21757 22251 . + . ID=gene-HMPREF7215_2668;Name=HMPREF7215_2668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2668 GCA_000177335.1|ADFP01000055.1 Genbank CDS 21757 22251 . + 0 ID=cds-EFB90948.1;Parent=gene-HMPREF7215_2668;Dbxref=NCBI_GP:EFB90948.1;Name=EFB90948.1;Note=identified by match to protein family HMM PF04008;gbkey=CDS;locus_tag=HMPREF7215_2668;product=adenosine specific kinase;protein_id=EFB90948.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 22285 23640 . + . ID=gene-HMPREF7215_2669;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2669 GCA_000177335.1|ADFP01000055.1 Genbank CDS 22285 23640 . + 0 ID=cds-EFB90949.1;Parent=gene-HMPREF7215_2669;Dbxref=NCBI_GP:EFB90949.1;Name=EFB90949.1;Note=identified by match to protein family HMM TIGR00416;gbkey=CDS;gene=radA;locus_tag=HMPREF7215_2669;product=DNA repair protein RadA;protein_id=EFB90949.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 23733 26243 . + . ID=gene-HMPREF7215_2670;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2670 GCA_000177335.1|ADFP01000055.1 Genbank CDS 23733 26243 . + 0 ID=cds-EFB90950.1;Parent=gene-HMPREF7215_2670;Dbxref=NCBI_GP:EFB90950.1;Name=EFB90950.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396;gbkey=CDS;gene=leuS;locus_tag=HMPREF7215_2670;product=leucine--tRNA ligase;protein_id=EFB90950.1;transl_table=11 GCA_000177335.1|ADFP01000055.1 Genbank gene 26244 27158 . + . ID=gene-HMPREF7215_2671;Name=HMPREF7215_2671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2671 GCA_000177335.1|ADFP01000055.1 Genbank CDS 26244 27158 . + 0 ID=cds-EFB90951.1;Parent=gene-HMPREF7215_2671;Dbxref=NCBI_GP:EFB90951.1;Name=EFB90951.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2671;product=putative DNA polymerase III%2C delta subunit;protein_id=EFB90951.1;transl_table=11 ##sequence-region ADFP01000054.1 1 29720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000054.1 Genbank region 1 29720 . + . ID=ADFP01000054.1:1..29720;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000054.1 Genbank gene 236 1006 . + . ID=gene-HMPREF7215_1954;Name=HMPREF7215_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1954 GCA_000177335.1|ADFP01000054.1 Genbank CDS 236 1006 . + 0 ID=cds-EFB90952.1;Parent=gene-HMPREF7215_1954;Dbxref=NCBI_GP:EFB90952.1;Name=EFB90952.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1954;product=hypothetical protein;protein_id=EFB90952.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 993 1943 . + . ID=gene-HMPREF7215_1955;Name=HMPREF7215_1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1955 GCA_000177335.1|ADFP01000054.1 Genbank CDS 993 1943 . + 0 ID=cds-EFB90953.1;Parent=gene-HMPREF7215_1955;Dbxref=NCBI_GP:EFB90953.1;Name=EFB90953.1;Note=identified by match to protein family HMM PF08843;gbkey=CDS;locus_tag=HMPREF7215_1955;product=hypothetical protein;protein_id=EFB90953.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 1965 2237 . + . ID=gene-HMPREF7215_1956;Name=HMPREF7215_1956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1956 GCA_000177335.1|ADFP01000054.1 Genbank CDS 1965 2237 . + 0 ID=cds-EFB90954.1;Parent=gene-HMPREF7215_1956;Dbxref=NCBI_GP:EFB90954.1;Name=EFB90954.1;gbkey=CDS;locus_tag=HMPREF7215_1956;product=hypothetical protein;protein_id=EFB90954.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 2263 2409 . - . ID=gene-HMPREF7215_1957;Name=HMPREF7215_1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1957 GCA_000177335.1|ADFP01000054.1 Genbank CDS 2263 2409 . - 0 ID=cds-EFB90955.1;Parent=gene-HMPREF7215_1957;Dbxref=NCBI_GP:EFB90955.1;Name=EFB90955.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1957;product=hypothetical protein;protein_id=EFB90955.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 2569 3423 . + . ID=gene-HMPREF7215_1958;Name=HMPREF7215_1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1958 GCA_000177335.1|ADFP01000054.1 Genbank CDS 2569 3423 . + 0 ID=cds-EFB90956.1;Parent=gene-HMPREF7215_1958;Dbxref=NCBI_GP:EFB90956.1;Name=EFB90956.1;gbkey=CDS;locus_tag=HMPREF7215_1958;product=hypothetical protein;protein_id=EFB90956.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 3434 4549 . + . ID=gene-HMPREF7215_1959;Name=HMPREF7215_1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1959 GCA_000177335.1|ADFP01000054.1 Genbank CDS 3434 4549 . + 0 ID=cds-EFB90957.1;Parent=gene-HMPREF7215_1959;Dbxref=NCBI_GP:EFB90957.1;Name=EFB90957.1;Note=identified by match to protein family HMM PF07905;gbkey=CDS;locus_tag=HMPREF7215_1959;product=purine catabolism regulatory protein-like family;protein_id=EFB90957.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 4786 6417 . + . ID=gene-HMPREF7215_1960;Name=HMPREF7215_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1960 GCA_000177335.1|ADFP01000054.1 Genbank CDS 4786 6417 . + 0 ID=cds-EFB90958.1;Parent=gene-HMPREF7215_1960;Dbxref=NCBI_GP:EFB90958.1;Name=EFB90958.1;Note=identified by match to protein family HMM PF03169;gbkey=CDS;locus_tag=HMPREF7215_1960;product=OPT oligopeptide transporter protein;protein_id=EFB90958.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 6476 7147 . + . ID=gene-HMPREF7215_1961;Name=HMPREF7215_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1961 GCA_000177335.1|ADFP01000054.1 Genbank CDS 6476 7147 . + 0 ID=cds-EFB90959.1;Parent=gene-HMPREF7215_1961;Dbxref=NCBI_GP:EFB90959.1;Name=EFB90959.1;Note=identified by match to protein family HMM PF01177;gbkey=CDS;locus_tag=HMPREF7215_1961;product=Asp/Glu/Hydantoin racemase;protein_id=EFB90959.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 7161 8240 . + . ID=gene-HMPREF7215_1962;Name=HMPREF7215_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1962 GCA_000177335.1|ADFP01000054.1 Genbank CDS 7161 8240 . + 0 ID=cds-EFB90960.1;Parent=gene-HMPREF7215_1962;Dbxref=NCBI_GP:EFB90960.1;Name=EFB90960.1;Note=identified by match to protein family HMM PF06032;gbkey=CDS;locus_tag=HMPREF7215_1962;product=hypothetical protein;protein_id=EFB90960.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 8309 9271 . + . ID=gene-HMPREF7215_1963;Name=HMPREF7215_1963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1963 GCA_000177335.1|ADFP01000054.1 Genbank CDS 8309 9271 . + 0 ID=cds-EFB90961.1;Parent=gene-HMPREF7215_1963;Dbxref=NCBI_GP:EFB90961.1;Name=EFB90961.1;Note=identified by match to protein family HMM PF06675;gbkey=CDS;locus_tag=HMPREF7215_1963;product=hypothetical protein;protein_id=EFB90961.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 9283 9957 . + . ID=gene-HMPREF7215_1964;Name=HMPREF7215_1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1964 GCA_000177335.1|ADFP01000054.1 Genbank CDS 9283 9957 . + 0 ID=cds-EFB90962.1;Parent=gene-HMPREF7215_1964;Dbxref=NCBI_GP:EFB90962.1;Name=EFB90962.1;Note=identified by match to protein family HMM PF07302;gbkey=CDS;locus_tag=HMPREF7215_1964;product=AroM protein;protein_id=EFB90962.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 10641 11552 . - . ID=gene-HMPREF7215_1965;Name=HMPREF7215_1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1965 GCA_000177335.1|ADFP01000054.1 Genbank CDS 10641 11552 . - 0 ID=cds-EFB90963.1;Parent=gene-HMPREF7215_1965;Dbxref=NCBI_GP:EFB90963.1;Name=EFB90963.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=HMPREF7215_1965;product=transcriptional regulator%2C LysR family;protein_id=EFB90963.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 11948 12901 . + . ID=gene-HMPREF7215_1966;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1966 GCA_000177335.1|ADFP01000054.1 Genbank CDS 11948 12901 . + 0 ID=cds-EFB90964.1;Parent=gene-HMPREF7215_1966;Dbxref=NCBI_GP:EFB90964.1;Name=EFB90964.1;Note=identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01230;gbkey=CDS;gene=speB;locus_tag=HMPREF7215_1966;product=agmatinase;protein_id=EFB90964.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 12920 14383 . + . ID=gene-HMPREF7215_1967;Name=HMPREF7215_1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1967 GCA_000177335.1|ADFP01000054.1 Genbank CDS 12920 14383 . + 0 ID=cds-EFB90965.1;Parent=gene-HMPREF7215_1967;Dbxref=NCBI_GP:EFB90965.1;Name=EFB90965.1;Note=identified by match to protein family HMM PF07670;gbkey=CDS;locus_tag=HMPREF7215_1967;product=transporter gate domain protein;protein_id=EFB90965.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 14380 14604 . + . ID=gene-HMPREF7215_1968;Name=HMPREF7215_1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1968 GCA_000177335.1|ADFP01000054.1 Genbank CDS 14380 14604 . + 0 ID=cds-EFB90966.1;Parent=gene-HMPREF7215_1968;Dbxref=NCBI_GP:EFB90966.1;Name=EFB90966.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1968;product=hypothetical protein;protein_id=EFB90966.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 14621 17488 . - . ID=gene-HMPREF7215_1969;Name=HMPREF7215_1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1969 GCA_000177335.1|ADFP01000054.1 Genbank CDS 14621 17488 . - 0 ID=cds-EFB90967.1;Parent=gene-HMPREF7215_1969;Dbxref=NCBI_GP:EFB90967.1;Name=EFB90967.1;Note=identified by match to protein family HMM PF03699;gbkey=CDS;locus_tag=HMPREF7215_1969;product=hypothetical protein;protein_id=EFB90967.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 17541 18323 . - . ID=gene-HMPREF7215_1970;Name=HMPREF7215_1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1970 GCA_000177335.1|ADFP01000054.1 Genbank CDS 17541 18323 . - 0 ID=cds-EFB90968.1;Parent=gene-HMPREF7215_1970;Dbxref=NCBI_GP:EFB90968.1;Name=EFB90968.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1970;product=hypothetical protein;protein_id=EFB90968.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 18354 19469 . - . ID=gene-HMPREF7215_1971;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=HMPREF7215_1971 GCA_000177335.1|ADFP01000054.1 Genbank CDS 18354 19469 . - 0 ID=cds-EFB90969.1;Parent=gene-HMPREF7215_1971;Dbxref=NCBI_GP:EFB90969.1;Name=EFB90969.1;Note=identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00876;gbkey=CDS;gene=tal;locus_tag=HMPREF7215_1971;product=transaldolase;protein_id=EFB90969.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 19466 20182 . - . ID=gene-HMPREF7215_1972;Name=HMPREF7215_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1972 GCA_000177335.1|ADFP01000054.1 Genbank CDS 19466 20182 . - 0 ID=cds-EFB90970.1;Parent=gene-HMPREF7215_1972;Dbxref=NCBI_GP:EFB90970.1;Name=EFB90970.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;locus_tag=HMPREF7215_1972;product=hypothetical protein;protein_id=EFB90970.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 20192 20680 . - . ID=gene-HMPREF7215_1973;Name=HMPREF7215_1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1973 GCA_000177335.1|ADFP01000054.1 Genbank CDS 20192 20680 . - 0 ID=cds-EFB90971.1;Parent=gene-HMPREF7215_1973;Dbxref=NCBI_GP:EFB90971.1;Name=EFB90971.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1973;product=hypothetical protein;protein_id=EFB90971.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 21008 21649 . + . ID=gene-HMPREF7215_1974;Name=HMPREF7215_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1974 GCA_000177335.1|ADFP01000054.1 Genbank CDS 21008 21649 . + 0 ID=cds-EFB90972.1;Parent=gene-HMPREF7215_1974;Dbxref=NCBI_GP:EFB90972.1;Name=EFB90972.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=HMPREF7215_1974;product=HAD hydrolase%2C family IA%2C variant 3;protein_id=EFB90972.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 21702 22832 . - . ID=gene-HMPREF7215_1975;Name=HMPREF7215_1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1975 GCA_000177335.1|ADFP01000054.1 Genbank CDS 21702 22832 . - 0 ID=cds-EFB90973.1;Parent=gene-HMPREF7215_1975;Dbxref=NCBI_GP:EFB90973.1;Name=EFB90973.1;Note=identified by match to protein family HMM PF04237;gbkey=CDS;locus_tag=HMPREF7215_1975;product=hypothetical protein;protein_id=EFB90973.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 22846 23391 . - . ID=gene-HMPREF7215_1976;Name=HMPREF7215_1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1976 GCA_000177335.1|ADFP01000054.1 Genbank CDS 22846 23391 . - 0 ID=cds-EFB90974.1;Parent=gene-HMPREF7215_1976;Dbxref=NCBI_GP:EFB90974.1;Name=EFB90974.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=HMPREF7215_1976;product=acetyltransferase%2C GNAT family;protein_id=EFB90974.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 23469 24683 . - . ID=gene-HMPREF7215_1977;Name=HMPREF7215_1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1977 GCA_000177335.1|ADFP01000054.1 Genbank CDS 23469 24683 . - 0 ID=cds-EFB90975.1;Parent=gene-HMPREF7215_1977;Dbxref=NCBI_GP:EFB90975.1;Name=EFB90975.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1977;product=peptidase dimerization domain protein;protein_id=EFB90975.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 24680 25573 . - . ID=gene-HMPREF7215_1978;Name=HMPREF7215_1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1978 GCA_000177335.1|ADFP01000054.1 Genbank CDS 24680 25573 . - 0 ID=cds-EFB90976.1;Parent=gene-HMPREF7215_1978;Dbxref=NCBI_GP:EFB90976.1;Name=EFB90976.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_1978;product=putative membrane protein;protein_id=EFB90976.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 25586 25852 . + . ID=gene-HMPREF7215_1980;Name=HMPREF7215_1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1980 GCA_000177335.1|ADFP01000054.1 Genbank CDS 25586 25852 . + 0 ID=cds-EFB90977.1;Parent=gene-HMPREF7215_1980;Dbxref=NCBI_GP:EFB90977.1;Name=EFB90977.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1980;product=hypothetical protein;protein_id=EFB90977.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 25849 27783 . - . ID=gene-HMPREF7215_1979;Name=HMPREF7215_1979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1979 GCA_000177335.1|ADFP01000054.1 Genbank CDS 25849 27783 . - 0 ID=cds-EFB90978.1;Parent=gene-HMPREF7215_1979;Dbxref=NCBI_GP:EFB90978.1;Name=EFB90978.1;Note=identified by match to protein family HMM PF00326%3B match to protein family HMM PF02129;gbkey=CDS;locus_tag=HMPREF7215_1979;product=peptidase%2C S9A/B/C family%2C catalytic domain protein;protein_id=EFB90978.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 27842 28876 . - . ID=gene-HMPREF7215_1981;Name=HMPREF7215_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1981 GCA_000177335.1|ADFP01000054.1 Genbank CDS 27842 28876 . - 0 ID=cds-EFB90979.1;Parent=gene-HMPREF7215_1981;Dbxref=NCBI_GP:EFB90979.1;Name=EFB90979.1;Note=identified by match to protein family HMM PF01244;gbkey=CDS;locus_tag=HMPREF7215_1981;product=renal dipeptidase family protein;protein_id=EFB90979.1;transl_table=11 GCA_000177335.1|ADFP01000054.1 Genbank gene 29135 29720 . - . ID=gene-HMPREF7215_1982;Name=HMPREF7215_1982;end_range=29720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1982;partial=true GCA_000177335.1|ADFP01000054.1 Genbank CDS 29135 29720 . - 1 ID=cds-EFB90980.1;Parent=gene-HMPREF7215_1982;Dbxref=NCBI_GP:EFB90980.1;Name=EFB90980.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=29720,.;gbkey=CDS;locus_tag=HMPREF7215_1982;partial=true;product=hypothetical protein;protein_id=EFB90980.1;transl_table=11 ##sequence-region ADFP01000053.1 1 24675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000053.1 Genbank region 1 24675 . + . ID=ADFP01000053.1:1..24675;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000053.1 Genbank gene 1 1371 . - . ID=gene-HMPREF7215_2462;Name=HMPREF7215_2462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2462;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000053.1 Genbank CDS 1 1371 . - 0 ID=cds-EFB90981.1;Parent=gene-HMPREF7215_2462;Dbxref=NCBI_GP:EFB90981.1;Name=EFB90981.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_2462;partial=true;product=MATE efflux family protein;protein_id=EFB90981.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 1373 1792 . - . ID=gene-HMPREF7215_2464;Name=HMPREF7215_2464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2464 GCA_000177335.1|ADFP01000053.1 Genbank CDS 1373 1792 . - 0 ID=cds-EFB90982.1;Parent=gene-HMPREF7215_2464;Dbxref=NCBI_GP:EFB90982.1;Name=EFB90982.1;Note=identified by match to protein family HMM PF01402%3B match to protein family HMM PF08753;gbkey=CDS;locus_tag=HMPREF7215_2464;product=putative nickel-responsive transcriptional regulator NikR;protein_id=EFB90982.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 1768 2646 . - . ID=gene-HMPREF7215_2465;Name=HMPREF7215_2465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2465 GCA_000177335.1|ADFP01000053.1 Genbank CDS 1768 2646 . - 0 ID=cds-EFB90983.1;Parent=gene-HMPREF7215_2465;Dbxref=NCBI_GP:EFB90983.1;Name=EFB90983.1;gbkey=CDS;locus_tag=HMPREF7215_2465;product=hypothetical protein;protein_id=EFB90983.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 2833 4248 . + . ID=gene-HMPREF7215_2466;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2466 GCA_000177335.1|ADFP01000053.1 Genbank CDS 2833 4248 . + 0 ID=cds-EFB90984.1;Parent=gene-HMPREF7215_2466;Dbxref=NCBI_GP:EFB90984.1;Name=EFB90984.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00979;gbkey=CDS;gene=fumC;locus_tag=HMPREF7215_2466;product=fumarate hydratase%2C class II;protein_id=EFB90984.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 4256 5086 . + . ID=gene-HMPREF7215_2468;Name=HMPREF7215_2468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2468 GCA_000177335.1|ADFP01000053.1 Genbank CDS 4256 5086 . + 0 ID=cds-EFB90985.1;Parent=gene-HMPREF7215_2468;Dbxref=NCBI_GP:EFB90985.1;Name=EFB90985.1;Note=identified by match to protein family HMM PF04951;gbkey=CDS;locus_tag=HMPREF7215_2468;product=D-stereospecific aminopeptidase;protein_id=EFB90985.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 5083 5259 . - . ID=gene-HMPREF7215_2467;Name=HMPREF7215_2467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2467 GCA_000177335.1|ADFP01000053.1 Genbank CDS 5083 5259 . - 0 ID=cds-EFB90986.1;Parent=gene-HMPREF7215_2467;Dbxref=NCBI_GP:EFB90986.1;Name=EFB90986.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2467;product=hypothetical protein;protein_id=EFB90986.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 5278 6762 . + . ID=gene-HMPREF7215_2469;Name=HMPREF7215_2469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2469 GCA_000177335.1|ADFP01000053.1 Genbank CDS 5278 6762 . + 0 ID=cds-EFB90987.1;Parent=gene-HMPREF7215_2469;Dbxref=NCBI_GP:EFB90987.1;Name=EFB90987.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF04324;gbkey=CDS;locus_tag=HMPREF7215_2469;product=FAD dependent oxidoreductase;protein_id=EFB90987.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 6759 8000 . + . ID=gene-HMPREF7215_2470;Name=HMPREF7215_2470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2470 GCA_000177335.1|ADFP01000053.1 Genbank CDS 6759 8000 . + 0 ID=cds-EFB90988.1;Parent=gene-HMPREF7215_2470;Dbxref=NCBI_GP:EFB90988.1;Name=EFB90988.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_2470;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFB90988.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 7997 8377 . + . ID=gene-HMPREF7215_2471;Name=HMPREF7215_2471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2471 GCA_000177335.1|ADFP01000053.1 Genbank CDS 7997 8377 . + 0 ID=cds-EFB90989.1;Parent=gene-HMPREF7215_2471;Dbxref=NCBI_GP:EFB90989.1;Name=EFB90989.1;Note=identified by match to protein family HMM PF07892;gbkey=CDS;locus_tag=HMPREF7215_2471;product=hypothetical protein;protein_id=EFB90989.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 8496 8684 . + . ID=gene-HMPREF7215_2472;Name=HMPREF7215_2472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2472 GCA_000177335.1|ADFP01000053.1 Genbank CDS 8496 8684 . + 0 ID=cds-EFB90990.1;Parent=gene-HMPREF7215_2472;Dbxref=NCBI_GP:EFB90990.1;Name=EFB90990.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2472;product=hypothetical protein;protein_id=EFB90990.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 9107 9340 . + . ID=gene-HMPREF7215_2473;Name=HMPREF7215_2473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2473 GCA_000177335.1|ADFP01000053.1 Genbank CDS 9107 9340 . + 0 ID=cds-EFB90991.1;Parent=gene-HMPREF7215_2473;Dbxref=NCBI_GP:EFB90991.1;Name=EFB90991.1;Note=identified by match to protein family HMM PF04023;gbkey=CDS;locus_tag=HMPREF7215_2473;product=FeoA domain protein;protein_id=EFB90991.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 9429 9662 . + . ID=gene-HMPREF7215_2474;Name=HMPREF7215_2474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2474 GCA_000177335.1|ADFP01000053.1 Genbank CDS 9429 9662 . + 0 ID=cds-EFB90992.1;Parent=gene-HMPREF7215_2474;Dbxref=NCBI_GP:EFB90992.1;Name=EFB90992.1;Note=identified by match to protein family HMM PF04023;gbkey=CDS;locus_tag=HMPREF7215_2474;product=FeoA domain protein;protein_id=EFB90992.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 9662 12166 . + . ID=gene-HMPREF7215_2475;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2475 GCA_000177335.1|ADFP01000053.1 Genbank CDS 9662 12166 . + 0 ID=cds-EFB90993.1;Parent=gene-HMPREF7215_2475;Dbxref=NCBI_GP:EFB90993.1;Name=EFB90993.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231;gbkey=CDS;gene=feoB;locus_tag=HMPREF7215_2475;product=ferrous iron transport protein B;protein_id=EFB90993.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 12258 12578 . + . ID=gene-HMPREF7215_2476;Name=HMPREF7215_2476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2476 GCA_000177335.1|ADFP01000053.1 Genbank CDS 12258 12578 . + 0 ID=cds-EFB90994.1;Parent=gene-HMPREF7215_2476;Dbxref=NCBI_GP:EFB90994.1;Name=EFB90994.1;gbkey=CDS;locus_tag=HMPREF7215_2476;product=hypothetical protein;protein_id=EFB90994.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 12589 13434 . + . ID=gene-HMPREF7215_2477;Name=HMPREF7215_2477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2477 GCA_000177335.1|ADFP01000053.1 Genbank CDS 12589 13434 . + 0 ID=cds-EFB90995.1;Parent=gene-HMPREF7215_2477;Dbxref=NCBI_GP:EFB90995.1;Name=EFB90995.1;gbkey=CDS;locus_tag=HMPREF7215_2477;product=hypothetical protein;protein_id=EFB90995.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 13478 13627 . + . ID=gene-HMPREF7215_2478;Name=HMPREF7215_2478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2478 GCA_000177335.1|ADFP01000053.1 Genbank CDS 13478 13627 . + 0 ID=cds-EFB90996.1;Parent=gene-HMPREF7215_2478;Dbxref=NCBI_GP:EFB90996.1;Name=EFB90996.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2478;product=hypothetical protein;protein_id=EFB90996.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 13704 14519 . + . ID=gene-HMPREF7215_2479;Name=HMPREF7215_2479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2479 GCA_000177335.1|ADFP01000053.1 Genbank CDS 13704 14519 . + 0 ID=cds-EFB90997.1;Parent=gene-HMPREF7215_2479;Dbxref=NCBI_GP:EFB90997.1;Name=EFB90997.1;gbkey=CDS;locus_tag=HMPREF7215_2479;product=hypothetical protein;protein_id=EFB90997.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 15098 17860 . + . ID=gene-HMPREF7215_2480;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2480 GCA_000177335.1|ADFP01000053.1 Genbank CDS 15098 17860 . + 0 ID=cds-EFB90998.1;Parent=gene-HMPREF7215_2480;Dbxref=NCBI_GP:EFB90998.1;Name=EFB90998.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;locus_tag=HMPREF7215_2480;product=isoleucine--tRNA ligase;protein_id=EFB90998.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 17886 18923 . + . ID=gene-HMPREF7215_2481;Name=HMPREF7215_2481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2481 GCA_000177335.1|ADFP01000053.1 Genbank CDS 17886 18923 . + 0 ID=cds-EFB90999.1;Parent=gene-HMPREF7215_2481;Dbxref=NCBI_GP:EFB90999.1;Name=EFB90999.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF7215_2481;product=pseudouridine synthase%2C RluA family;protein_id=EFB90999.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 19083 20054 . + . ID=gene-HMPREF7215_2482;Name=HMPREF7215_2482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2482 GCA_000177335.1|ADFP01000053.1 Genbank CDS 19083 20054 . + 0 ID=cds-EFB91000.1;Parent=gene-HMPREF7215_2482;Dbxref=NCBI_GP:EFB91000.1;Name=EFB91000.1;Note=identified by match to protein family HMM TIGR02122;gbkey=CDS;locus_tag=HMPREF7215_2482;product=TRAP transporter solute receptor%2C TAXI family;protein_id=EFB91000.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 20149 22098 . + . ID=gene-HMPREF7215_2483;Name=HMPREF7215_2483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2483 GCA_000177335.1|ADFP01000053.1 Genbank CDS 20149 22098 . + 0 ID=cds-EFB91001.1;Parent=gene-HMPREF7215_2483;Dbxref=NCBI_GP:EFB91001.1;Name=EFB91001.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR02123;gbkey=CDS;locus_tag=HMPREF7215_2483;product=TRAP transporter%2C 4TM/12TM fusion protein;protein_id=EFB91001.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 22168 22839 . + . ID=gene-HMPREF7215_2484;Name=HMPREF7215_2484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2484 GCA_000177335.1|ADFP01000053.1 Genbank CDS 22168 22839 . + 0 ID=cds-EFB91002.1;Parent=gene-HMPREF7215_2484;Dbxref=NCBI_GP:EFB91002.1;Name=EFB91002.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF7215_2484;product=phosphoglycerate mutase family protein;protein_id=EFB91002.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 22842 22991 . + . ID=gene-HMPREF7215_2486;Name=HMPREF7215_2486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2486 GCA_000177335.1|ADFP01000053.1 Genbank CDS 22842 22991 . + 0 ID=cds-EFB91003.1;Parent=gene-HMPREF7215_2486;Dbxref=NCBI_GP:EFB91003.1;Name=EFB91003.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2486;product=hypothetical protein;protein_id=EFB91003.1;transl_table=11 GCA_000177335.1|ADFP01000053.1 Genbank gene 22975 24624 . - . ID=gene-HMPREF7215_2485;Name=FbpA;gbkey=Gene;gene=FbpA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2485 GCA_000177335.1|ADFP01000053.1 Genbank CDS 22975 24624 . - 0 ID=cds-EFB91004.1;Parent=gene-HMPREF7215_2485;Dbxref=NCBI_GP:EFB91004.1;Name=EFB91004.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833;gbkey=CDS;gene=FbpA;locus_tag=HMPREF7215_2485;product=fibronectin-binding protein A domain protein;protein_id=EFB91004.1;transl_table=11 ##sequence-region ADFP01000052.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000052.1 Genbank region 1 988 . + . ID=ADFP01000052.1:1..988;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000052.1 Genbank gene 118 988 . - . ID=gene-HMPREF7215_2835;Name=HMPREF7215_2835;end_range=988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2835;partial=true GCA_000177335.1|ADFP01000052.1 Genbank CDS 118 988 . - 1 ID=cds-EFB91005.1;Parent=gene-HMPREF7215_2835;Dbxref=NCBI_GP:EFB91005.1;Name=EFB91005.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609;end_range=988,.;gbkey=CDS;locus_tag=HMPREF7215_2835;partial=true;product=transposase%2C IS4 family;protein_id=EFB91005.1;transl_table=11 ##sequence-region ADFP01000051.1 1 95701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000051.1 Genbank region 1 95701 . + . ID=ADFP01000051.1:1..95701;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000051.1 Genbank gene 593 1918 . - . ID=gene-HMPREF7215_0594;Name=HMPREF7215_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0594 GCA_000177335.1|ADFP01000051.1 Genbank CDS 593 1918 . - 0 ID=cds-EFB91006.1;Parent=gene-HMPREF7215_0594;Dbxref=NCBI_GP:EFB91006.1;Name=EFB91006.1;gbkey=CDS;locus_tag=HMPREF7215_0594;product=hypothetical protein;protein_id=EFB91006.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 2157 3317 . - . ID=gene-HMPREF7215_0595;Name=HMPREF7215_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0595 GCA_000177335.1|ADFP01000051.1 Genbank CDS 2157 3317 . - 0 ID=cds-EFB91007.1;Parent=gene-HMPREF7215_0595;Dbxref=NCBI_GP:EFB91007.1;Name=EFB91007.1;gbkey=CDS;locus_tag=HMPREF7215_0595;product=hypothetical protein;protein_id=EFB91007.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 4319 4432 . - . ID=gene-HMPREF7215_0596;Name=HMPREF7215_0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0596 GCA_000177335.1|ADFP01000051.1 Genbank CDS 4319 4432 . - 0 ID=cds-EFB91008.1;Parent=gene-HMPREF7215_0596;Dbxref=NCBI_GP:EFB91008.1;Name=EFB91008.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0596;product=hypothetical protein;protein_id=EFB91008.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 4436 4527 . - . ID=gene-HMPREF7215_0597;Name=HMPREF7215_0597;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0597 GCA_000177335.1|ADFP01000051.1 Genbank tRNA 4436 4527 . - . ID=rna-HMPREF7215_0597;Parent=gene-HMPREF7215_0597;gbkey=tRNA;locus_tag=HMPREF7215_0597;product=tRNA-Ser GCA_000177335.1|ADFP01000051.1 Genbank exon 4436 4527 . - . ID=exon-HMPREF7215_0597-1;Parent=rna-HMPREF7215_0597;gbkey=tRNA;locus_tag=HMPREF7215_0597;product=tRNA-Ser GCA_000177335.1|ADFP01000051.1 Genbank gene 4566 5066 . - . ID=gene-HMPREF7215_0598;Name=HMPREF7215_0598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0598 GCA_000177335.1|ADFP01000051.1 Genbank CDS 4566 5066 . - 0 ID=cds-EFB91009.1;Parent=gene-HMPREF7215_0598;Dbxref=NCBI_GP:EFB91009.1;Name=EFB91009.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=HMPREF7215_0598;product=cytidine and deoxycytidylate deaminase zinc-binding region;protein_id=EFB91009.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 5136 5214 . - . ID=gene-HMPREF7215_0599;Name=HMPREF7215_0599;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0599 GCA_000177335.1|ADFP01000051.1 Genbank tRNA 5136 5214 . - . ID=rna-HMPREF7215_0599;Parent=gene-HMPREF7215_0599;gbkey=tRNA;locus_tag=HMPREF7215_0599;product=tRNA-Arg GCA_000177335.1|ADFP01000051.1 Genbank exon 5136 5214 . - . ID=exon-HMPREF7215_0599-1;Parent=rna-HMPREF7215_0599;gbkey=tRNA;locus_tag=HMPREF7215_0599;product=tRNA-Arg GCA_000177335.1|ADFP01000051.1 Genbank gene 5253 5331 . - . ID=gene-HMPREF7215_0600;Name=HMPREF7215_0600;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0600 GCA_000177335.1|ADFP01000051.1 Genbank tRNA 5253 5331 . - . ID=rna-HMPREF7215_0600;Parent=gene-HMPREF7215_0600;gbkey=tRNA;locus_tag=HMPREF7215_0600;product=tRNA-Arg GCA_000177335.1|ADFP01000051.1 Genbank exon 5253 5331 . - . ID=exon-HMPREF7215_0600-1;Parent=rna-HMPREF7215_0600;gbkey=tRNA;locus_tag=HMPREF7215_0600;product=tRNA-Arg GCA_000177335.1|ADFP01000051.1 Genbank gene 5348 5439 . - . ID=gene-HMPREF7215_0601;Name=HMPREF7215_0601;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0601 GCA_000177335.1|ADFP01000051.1 Genbank tRNA 5348 5439 . - . ID=rna-HMPREF7215_0601;Parent=gene-HMPREF7215_0601;gbkey=tRNA;locus_tag=HMPREF7215_0601;product=tRNA-Ser GCA_000177335.1|ADFP01000051.1 Genbank exon 5348 5439 . - . ID=exon-HMPREF7215_0601-1;Parent=rna-HMPREF7215_0601;gbkey=tRNA;locus_tag=HMPREF7215_0601;product=tRNA-Ser GCA_000177335.1|ADFP01000051.1 Genbank gene 5548 6603 . - . ID=gene-HMPREF7215_0602;Name=HMPREF7215_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0602 GCA_000177335.1|ADFP01000051.1 Genbank CDS 5548 6603 . - 0 ID=cds-EFB91010.1;Parent=gene-HMPREF7215_0602;Dbxref=NCBI_GP:EFB91010.1;Name=EFB91010.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=HMPREF7215_0602;product=exonuclease%2C DNA polymerase III%2C epsilon subunit family;protein_id=EFB91010.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 6989 8326 . - . ID=gene-HMPREF7215_0603;Name=HMPREF7215_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0603 GCA_000177335.1|ADFP01000051.1 Genbank CDS 6989 8326 . - 0 ID=cds-EFB91011.1;Parent=gene-HMPREF7215_0603;Dbxref=NCBI_GP:EFB91011.1;Name=EFB91011.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF7215_0603;product=putative butyryl-CoA:acetate CoA-transferase;protein_id=EFB91011.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 8323 8916 . - . ID=gene-HMPREF7215_0604;Name=HMPREF7215_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0604 GCA_000177335.1|ADFP01000051.1 Genbank CDS 8323 8916 . - 0 ID=cds-EFB91012.1;Parent=gene-HMPREF7215_0604;Dbxref=NCBI_GP:EFB91012.1;Name=EFB91012.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF7215_0604;product=indolepyruvate oxidoreductase subunit beta;protein_id=EFB91012.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 8913 10862 . - . ID=gene-HMPREF7215_0605;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0605 GCA_000177335.1|ADFP01000051.1 Genbank CDS 8913 10862 . - 0 ID=cds-EFB91013.1;Parent=gene-HMPREF7215_0605;Dbxref=NCBI_GP:EFB91013.1;Name=EFB91013.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01855%3B match to protein family HMM PF02775%3B match to protein family HMM TIGR03336;gbkey=CDS;gene=iorA;locus_tag=HMPREF7215_0605;product=indolepyruvate ferredoxin oxidoreductase%2C alpha subunit;protein_id=EFB91013.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 10852 11736 . + . ID=gene-HMPREF7215_0606;Name=HMPREF7215_0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0606 GCA_000177335.1|ADFP01000051.1 Genbank CDS 10852 11736 . + 0 ID=cds-EFB91014.1;Parent=gene-HMPREF7215_0606;Dbxref=NCBI_GP:EFB91014.1;Name=EFB91014.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_0606;product=LysR substrate binding domain protein;protein_id=EFB91014.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 12001 12330 . - . ID=gene-HMPREF7215_0607;Name=HMPREF7215_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0607 GCA_000177335.1|ADFP01000051.1 Genbank CDS 12001 12330 . - 0 ID=cds-EFB91015.1;Parent=gene-HMPREF7215_0607;Dbxref=NCBI_GP:EFB91015.1;Name=EFB91015.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;locus_tag=HMPREF7215_0607;product=toxin-antitoxin system%2C toxin component%2C MazF family;protein_id=EFB91015.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 12324 12635 . - . ID=gene-HMPREF7215_0608;Name=HMPREF7215_0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0608 GCA_000177335.1|ADFP01000051.1 Genbank CDS 12324 12635 . - 0 ID=cds-EFB91016.1;Parent=gene-HMPREF7215_0608;Dbxref=NCBI_GP:EFB91016.1;Name=EFB91016.1;Note=identified by match to protein family HMM PF04014;gbkey=CDS;locus_tag=HMPREF7215_0608;product=SpoVT/AbrB-like protein;protein_id=EFB91016.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 12550 12699 . + . ID=gene-HMPREF7215_0609;Name=HMPREF7215_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0609 GCA_000177335.1|ADFP01000051.1 Genbank CDS 12550 12699 . + 0 ID=cds-EFB91017.1;Parent=gene-HMPREF7215_0609;Dbxref=NCBI_GP:EFB91017.1;Name=EFB91017.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0609;product=hypothetical protein;protein_id=EFB91017.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 13166 13432 . - . ID=gene-HMPREF7215_0610;Name=HMPREF7215_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0610 GCA_000177335.1|ADFP01000051.1 Genbank CDS 13166 13432 . - 0 ID=cds-EFB91018.1;Parent=gene-HMPREF7215_0610;Dbxref=NCBI_GP:EFB91018.1;Name=EFB91018.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF7215_0610;product=DNA-binding helix-turn-helix protein;protein_id=EFB91018.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 13437 13844 . - . ID=gene-HMPREF7215_0611;Name=HMPREF7215_0611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0611 GCA_000177335.1|ADFP01000051.1 Genbank CDS 13437 13844 . - 0 ID=cds-EFB91019.1;Parent=gene-HMPREF7215_0611;Dbxref=NCBI_GP:EFB91019.1;Name=EFB91019.1;Note=identified by match to protein family HMM PF05973;gbkey=CDS;locus_tag=HMPREF7215_0611;product=toxin-antitoxin system%2C toxin component%2C RelE family;protein_id=EFB91019.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 14074 15375 . - . ID=gene-HMPREF7215_0612;Name=HMPREF7215_0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0612 GCA_000177335.1|ADFP01000051.1 Genbank CDS 14074 15375 . - 0 ID=cds-EFB91020.1;Parent=gene-HMPREF7215_0612;Dbxref=NCBI_GP:EFB91020.1;Name=EFB91020.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF7215_0612;product=site-specific recombinase%2C phage integrase family;protein_id=EFB91020.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 15896 16282 . - . ID=gene-HMPREF7215_0613;Name=HMPREF7215_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0613 GCA_000177335.1|ADFP01000051.1 Genbank CDS 15896 16282 . - 0 ID=cds-EFB91021.1;Parent=gene-HMPREF7215_0613;Dbxref=NCBI_GP:EFB91021.1;Name=EFB91021.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;locus_tag=HMPREF7215_0613;product=DnaJ domain protein;protein_id=EFB91021.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 16297 17136 . - . ID=gene-HMPREF7215_0614;Name=HMPREF7215_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0614 GCA_000177335.1|ADFP01000051.1 Genbank CDS 16297 17136 . - 0 ID=cds-EFB91022.1;Parent=gene-HMPREF7215_0614;Dbxref=NCBI_GP:EFB91022.1;Name=EFB91022.1;Note=identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01697%3B match to protein family HMM TIGR01700;gbkey=CDS;locus_tag=HMPREF7215_0614;product=purine nucleoside phosphorylase I%2C inosine and guanosine-specific;protein_id=EFB91022.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 17169 18062 . - . ID=gene-HMPREF7215_0615;Name=HMPREF7215_0615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0615 GCA_000177335.1|ADFP01000051.1 Genbank CDS 17169 18062 . - 0 ID=cds-EFB91023.1;Parent=gene-HMPREF7215_0615;Dbxref=NCBI_GP:EFB91023.1;Name=EFB91023.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;locus_tag=HMPREF7215_0615;product=phage integrase SAM-like domain protein;protein_id=EFB91023.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 18137 18664 . - . ID=gene-HMPREF7215_0616;Name=HMPREF7215_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0616 GCA_000177335.1|ADFP01000051.1 Genbank CDS 18137 18664 . - 0 ID=cds-EFB91024.1;Parent=gene-HMPREF7215_0616;Dbxref=NCBI_GP:EFB91024.1;Name=EFB91024.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF7215_0616;product=hydrolase%2C NUDIX family;protein_id=EFB91024.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 18700 19632 . - . ID=gene-HMPREF7215_0617;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HMPREF7215_0617 GCA_000177335.1|ADFP01000051.1 Genbank CDS 18700 19632 . - 0 ID=cds-EFB91025.1;Parent=gene-HMPREF7215_0617;Dbxref=NCBI_GP:EFB91025.1;Name=EFB91025.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;locus_tag=HMPREF7215_0617;product=methionyl-tRNA formyltransferase;protein_id=EFB91025.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 19629 20108 . - . ID=gene-HMPREF7215_0618;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=HMPREF7215_0618 GCA_000177335.1|ADFP01000051.1 Genbank CDS 19629 20108 . - 0 ID=cds-EFB91026.1;Parent=gene-HMPREF7215_0618;Dbxref=NCBI_GP:EFB91026.1;Name=EFB91026.1;Note=identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079;gbkey=CDS;gene=def;locus_tag=HMPREF7215_0618;product=peptide deformylase;protein_id=EFB91026.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 20113 20238 . - . ID=gene-HMPREF7215_0619;Name=HMPREF7215_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0619 GCA_000177335.1|ADFP01000051.1 Genbank CDS 20113 20238 . - 0 ID=cds-EFB91027.1;Parent=gene-HMPREF7215_0619;Dbxref=NCBI_GP:EFB91027.1;Name=EFB91027.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0619;product=hypothetical protein;protein_id=EFB91027.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 20271 21827 . - . ID=gene-HMPREF7215_0620;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0620 GCA_000177335.1|ADFP01000051.1 Genbank CDS 20271 21827 . - 0 ID=cds-EFB91028.1;Parent=gene-HMPREF7215_0620;Dbxref=NCBI_GP:EFB91028.1;Name=EFB91028.1;Note=identified by match to protein family HMM PF00575;gbkey=CDS;gene=rpsA;locus_tag=HMPREF7215_0620;product=30S ribosomal protein S1;protein_id=EFB91028.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 21820 22701 . - . ID=gene-HMPREF7215_0621;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0621 GCA_000177335.1|ADFP01000051.1 Genbank CDS 21820 22701 . - 0 ID=cds-EFB91029.1;Parent=gene-HMPREF7215_0621;Dbxref=NCBI_GP:EFB91029.1;Name=EFB91029.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216;gbkey=CDS;gene=ispH;locus_tag=HMPREF7215_0621;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=EFB91029.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 22698 23642 . - . ID=gene-HMPREF7215_0622;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0622 GCA_000177335.1|ADFP01000051.1 Genbank CDS 22698 23642 . - 0 ID=cds-EFB91030.1;Parent=gene-HMPREF7215_0622;Dbxref=NCBI_GP:EFB91030.1;Name=EFB91030.1;Note=identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;locus_tag=HMPREF7215_0622;product=tRNA dimethylallyltransferase;protein_id=EFB91030.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 23639 25468 . - . ID=gene-HMPREF7215_0623;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF7215_0623 GCA_000177335.1|ADFP01000051.1 Genbank CDS 23639 25468 . - 0 ID=cds-EFB91031.1;Parent=gene-HMPREF7215_0623;Dbxref=NCBI_GP:EFB91031.1;Name=EFB91031.1;Note=identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585;gbkey=CDS;gene=mutL;locus_tag=HMPREF7215_0623;product=DNA mismatch repair domain protein;protein_id=EFB91031.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 25465 28047 . - . ID=gene-HMPREF7215_0624;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0624 GCA_000177335.1|ADFP01000051.1 Genbank CDS 25465 28047 . - 0 ID=cds-EFB91032.1;Parent=gene-HMPREF7215_0624;Dbxref=NCBI_GP:EFB91032.1;Name=EFB91032.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070;gbkey=CDS;gene=mutS;locus_tag=HMPREF7215_0624;product=DNA mismatch repair protein MutS;protein_id=EFB91032.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 28048 28470 . - . ID=gene-HMPREF7215_0625;Name=HMPREF7215_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0625 GCA_000177335.1|ADFP01000051.1 Genbank CDS 28048 28470 . - 0 ID=cds-EFB91033.1;Parent=gene-HMPREF7215_0625;Dbxref=NCBI_GP:EFB91033.1;Name=EFB91033.1;Note=identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250;gbkey=CDS;locus_tag=HMPREF7215_0625;product=RNAse H domain protein%2C YqgF family;protein_id=EFB91033.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 28473 31121 . - . ID=gene-HMPREF7215_0626;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0626 GCA_000177335.1|ADFP01000051.1 Genbank CDS 28473 31121 . - 0 ID=cds-EFB91034.1;Parent=gene-HMPREF7215_0626;Dbxref=NCBI_GP:EFB91034.1;Name=EFB91034.1;Note=identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344;gbkey=CDS;gene=alaS;locus_tag=HMPREF7215_0626;product=alanine--tRNA ligase;protein_id=EFB91034.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 31187 32473 . - . ID=gene-HMPREF7215_0627;Name=HMPREF7215_0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0627 GCA_000177335.1|ADFP01000051.1 Genbank CDS 31187 32473 . - 0 ID=cds-EFB91035.1;Parent=gene-HMPREF7215_0627;Dbxref=NCBI_GP:EFB91035.1;Name=EFB91035.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_0627;product=amidohydrolase family protein;protein_id=EFB91035.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 32475 33725 . - . ID=gene-HMPREF7215_0628;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0628 GCA_000177335.1|ADFP01000051.1 Genbank CDS 32475 33725 . - 0 ID=cds-EFB91036.1;Parent=gene-HMPREF7215_0628;Dbxref=NCBI_GP:EFB91036.1;Name=EFB91036.1;Note=identified by match to protein family HMM PF00670%3B match to protein family HMM PF02826%3B match to protein family HMM PF05221%3B match to protein family HMM TIGR00936;gbkey=CDS;gene=ahcY;locus_tag=HMPREF7215_0628;product=adenosylhomocysteinase;protein_id=EFB91036.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 33739 34998 . - . ID=gene-HMPREF7215_0629;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0629 GCA_000177335.1|ADFP01000051.1 Genbank CDS 33739 34998 . - 0 ID=cds-EFB91037.1;Parent=gene-HMPREF7215_0629;Dbxref=NCBI_GP:EFB91037.1;Name=EFB91037.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;locus_tag=HMPREF7215_0629;product=exodeoxyribonuclease VII%2C large subunit;protein_id=EFB91037.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 34995 35519 . - . ID=gene-HMPREF7215_0630;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0630 GCA_000177335.1|ADFP01000051.1 Genbank CDS 34995 35519 . - 0 ID=cds-EFB91038.1;Parent=gene-HMPREF7215_0630;Dbxref=NCBI_GP:EFB91038.1;Name=EFB91038.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;locus_tag=HMPREF7215_0630;product=transcription antitermination factor NusB;protein_id=EFB91038.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 35513 35881 . - . ID=gene-HMPREF7215_0631;Name=HMPREF7215_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0631 GCA_000177335.1|ADFP01000051.1 Genbank CDS 35513 35881 . - 0 ID=cds-EFB91039.1;Parent=gene-HMPREF7215_0631;Dbxref=NCBI_GP:EFB91039.1;Name=EFB91039.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0631;product=hypothetical protein;protein_id=EFB91039.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 36073 36576 . - . ID=gene-HMPREF7215_0632;Name=HMPREF7215_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0632 GCA_000177335.1|ADFP01000051.1 Genbank CDS 36073 36576 . - 0 ID=cds-EFB91040.1;Parent=gene-HMPREF7215_0632;Dbxref=NCBI_GP:EFB91040.1;Name=EFB91040.1;Note=identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=HMPREF7215_0632;product=hypothetical protein;protein_id=EFB91040.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 36563 36988 . - . ID=gene-HMPREF7215_0633;Name=HMPREF7215_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0633 GCA_000177335.1|ADFP01000051.1 Genbank CDS 36563 36988 . - 0 ID=cds-EFB91041.1;Parent=gene-HMPREF7215_0633;Dbxref=NCBI_GP:EFB91041.1;Name=EFB91041.1;gbkey=CDS;locus_tag=HMPREF7215_0633;product=hypothetical protein;protein_id=EFB91041.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 37108 37683 . - . ID=gene-HMPREF7215_0634;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=HMPREF7215_0634 GCA_000177335.1|ADFP01000051.1 Genbank CDS 37108 37683 . - 0 ID=cds-EFB91042.1;Parent=gene-HMPREF7215_0634;Dbxref=NCBI_GP:EFB91042.1;Name=EFB91042.1;Note=identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038;gbkey=CDS;gene=efp;locus_tag=HMPREF7215_0634;product=translation elongation factor P;protein_id=EFB91042.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 37785 37988 . - . ID=gene-HMPREF7215_0635;Name=HMPREF7215_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0635 GCA_000177335.1|ADFP01000051.1 Genbank CDS 37785 37988 . - 0 ID=cds-EFB91043.1;Parent=gene-HMPREF7215_0635;Dbxref=NCBI_GP:EFB91043.1;Name=EFB91043.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0635;product=hypothetical protein;protein_id=EFB91043.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 38166 39173 . - . ID=gene-HMPREF7215_0636;Name=HMPREF7215_0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0636 GCA_000177335.1|ADFP01000051.1 Genbank CDS 38166 39173 . - 0 ID=cds-EFB91044.1;Parent=gene-HMPREF7215_0636;Dbxref=NCBI_GP:EFB91044.1;Name=EFB91044.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0636;product=hypothetical protein;protein_id=EFB91044.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 39244 39627 . + . ID=gene-HMPREF7215_0637;Name=HMPREF7215_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0637 GCA_000177335.1|ADFP01000051.1 Genbank CDS 39244 39627 . + 0 ID=cds-EFB91045.1;Parent=gene-HMPREF7215_0637;Dbxref=NCBI_GP:EFB91045.1;Name=EFB91045.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0637;product=hypothetical protein;protein_id=EFB91045.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 39884 41584 . - . ID=gene-HMPREF7215_0638;Name=HMPREF7215_0638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0638 GCA_000177335.1|ADFP01000051.1 Genbank CDS 39884 41584 . - 0 ID=cds-EFB91046.1;Parent=gene-HMPREF7215_0638;Dbxref=NCBI_GP:EFB91046.1;Name=EFB91046.1;Note=identified by match to protein family HMM PF00263%3B match to protein family HMM PF03958%3B match to protein family HMM PF07660;gbkey=CDS;locus_tag=HMPREF7215_0638;product=bacterial type II/III secretion system short domain protein;protein_id=EFB91046.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 41594 42061 . - . ID=gene-HMPREF7215_0639;Name=HMPREF7215_0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0639 GCA_000177335.1|ADFP01000051.1 Genbank CDS 41594 42061 . - 0 ID=cds-EFB91047.1;Parent=gene-HMPREF7215_0639;Dbxref=NCBI_GP:EFB91047.1;Name=EFB91047.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0639;product=hypothetical protein;protein_id=EFB91047.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 42058 42579 . - . ID=gene-HMPREF7215_0640;Name=HMPREF7215_0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0640 GCA_000177335.1|ADFP01000051.1 Genbank CDS 42058 42579 . - 0 ID=cds-EFB91048.1;Parent=gene-HMPREF7215_0640;Dbxref=NCBI_GP:EFB91048.1;Name=EFB91048.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0640;product=hypothetical protein;protein_id=EFB91048.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 42576 43109 . - . ID=gene-HMPREF7215_0641;Name=HMPREF7215_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0641 GCA_000177335.1|ADFP01000051.1 Genbank CDS 42576 43109 . - 0 ID=cds-EFB91049.1;Parent=gene-HMPREF7215_0641;Dbxref=NCBI_GP:EFB91049.1;Name=EFB91049.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0641;product=hypothetical protein;protein_id=EFB91049.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 43099 44019 . - . ID=gene-HMPREF7215_0642;Name=HMPREF7215_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0642 GCA_000177335.1|ADFP01000051.1 Genbank CDS 43099 44019 . - 0 ID=cds-EFB91050.1;Parent=gene-HMPREF7215_0642;Dbxref=NCBI_GP:EFB91050.1;Name=EFB91050.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0642;product=hypothetical protein;protein_id=EFB91050.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 44026 44373 . - . ID=gene-HMPREF7215_0643;Name=HMPREF7215_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0643 GCA_000177335.1|ADFP01000051.1 Genbank CDS 44026 44373 . - 0 ID=cds-EFB91051.1;Parent=gene-HMPREF7215_0643;Dbxref=NCBI_GP:EFB91051.1;Name=EFB91051.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0643;product=prepilin-type cleavage/methylation N-terminal domain protein;protein_id=EFB91051.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 44385 45608 . - . ID=gene-HMPREF7215_0644;Name=HMPREF7215_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0644 GCA_000177335.1|ADFP01000051.1 Genbank CDS 44385 45608 . - 0 ID=cds-EFB91052.1;Parent=gene-HMPREF7215_0644;Dbxref=NCBI_GP:EFB91052.1;Name=EFB91052.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;locus_tag=HMPREF7215_0644;product=bacterial type II secretion system domain protein F;protein_id=EFB91052.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 45605 46690 . - . ID=gene-HMPREF7215_0645;Name=HMPREF7215_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0645 GCA_000177335.1|ADFP01000051.1 Genbank CDS 45605 46690 . - 0 ID=cds-EFB91053.1;Parent=gene-HMPREF7215_0645;Dbxref=NCBI_GP:EFB91053.1;Name=EFB91053.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420;gbkey=CDS;locus_tag=HMPREF7215_0645;product=twitching motility protein;protein_id=EFB91053.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 46696 48210 . - . ID=gene-HMPREF7215_0646;Name=HMPREF7215_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0646 GCA_000177335.1|ADFP01000051.1 Genbank CDS 46696 48210 . - 0 ID=cds-EFB91054.1;Parent=gene-HMPREF7215_0646;Dbxref=NCBI_GP:EFB91054.1;Name=EFB91054.1;Note=identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157;gbkey=CDS;locus_tag=HMPREF7215_0646;product=type II/IV secretion system protein;protein_id=EFB91054.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 48224 49831 . - . ID=gene-HMPREF7215_0647;Name=HMPREF7215_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0647 GCA_000177335.1|ADFP01000051.1 Genbank CDS 48224 49831 . - 0 ID=cds-EFB91055.1;Parent=gene-HMPREF7215_0647;Dbxref=NCBI_GP:EFB91055.1;Name=EFB91055.1;Note=identified by match to protein family HMM PF01011;gbkey=CDS;locus_tag=HMPREF7215_0647;product=PQQ enzyme repeat protein;protein_id=EFB91055.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 49828 50430 . - . ID=gene-HMPREF7215_0648;Name=HMPREF7215_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0648 GCA_000177335.1|ADFP01000051.1 Genbank CDS 49828 50430 . - 0 ID=cds-EFB91056.1;Parent=gene-HMPREF7215_0648;Dbxref=NCBI_GP:EFB91056.1;Name=EFB91056.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0648;product=hypothetical protein;protein_id=EFB91056.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 50412 51239 . - . ID=gene-HMPREF7215_0649;Name=HMPREF7215_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0649 GCA_000177335.1|ADFP01000051.1 Genbank CDS 50412 51239 . - 0 ID=cds-EFB91057.1;Parent=gene-HMPREF7215_0649;Dbxref=NCBI_GP:EFB91057.1;Name=EFB91057.1;Note=identified by match to protein family HMM TIGR02532;gbkey=CDS;locus_tag=HMPREF7215_0649;product=prepilin-type cleavage/methylation N-terminal domain protein;protein_id=EFB91057.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 51605 52360 . + . ID=gene-HMPREF7215_0650;Name=HMPREF7215_0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0650 GCA_000177335.1|ADFP01000051.1 Genbank CDS 51605 52360 . + 0 ID=cds-EFB91058.1;Parent=gene-HMPREF7215_0650;Dbxref=NCBI_GP:EFB91058.1;Name=EFB91058.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_0650;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB91058.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 52577 52792 . - . ID=gene-HMPREF7215_0651;Name=HMPREF7215_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0651 GCA_000177335.1|ADFP01000051.1 Genbank CDS 52577 52792 . - 0 ID=cds-EFB91059.1;Parent=gene-HMPREF7215_0651;Dbxref=NCBI_GP:EFB91059.1;Name=EFB91059.1;gbkey=CDS;locus_tag=HMPREF7215_0651;product=hypothetical protein;protein_id=EFB91059.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 52832 53056 . - . ID=gene-HMPREF7215_0652;Name=HMPREF7215_0652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0652 GCA_000177335.1|ADFP01000051.1 Genbank CDS 52832 53056 . - 0 ID=cds-EFB91060.1;Parent=gene-HMPREF7215_0652;Dbxref=NCBI_GP:EFB91060.1;Name=EFB91060.1;gbkey=CDS;locus_tag=HMPREF7215_0652;product=hypothetical protein;protein_id=EFB91060.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 53091 53303 . + . ID=gene-HMPREF7215_0653;Name=HMPREF7215_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0653 GCA_000177335.1|ADFP01000051.1 Genbank CDS 53091 53303 . + 0 ID=cds-EFB91061.1;Parent=gene-HMPREF7215_0653;Dbxref=NCBI_GP:EFB91061.1;Name=EFB91061.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0653;product=hypothetical protein;protein_id=EFB91061.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 53477 54244 . + . ID=gene-HMPREF7215_0654;Name=HMPREF7215_0654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0654 GCA_000177335.1|ADFP01000051.1 Genbank CDS 53477 54244 . + 0 ID=cds-EFB91062.1;Parent=gene-HMPREF7215_0654;Dbxref=NCBI_GP:EFB91062.1;Name=EFB91062.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;locus_tag=HMPREF7215_0654;product=ABC-2 type transporter;protein_id=EFB91062.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 54248 55006 . + . ID=gene-HMPREF7215_0655;Name=HMPREF7215_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0655 GCA_000177335.1|ADFP01000051.1 Genbank CDS 54248 55006 . + 0 ID=cds-EFB91063.1;Parent=gene-HMPREF7215_0655;Dbxref=NCBI_GP:EFB91063.1;Name=EFB91063.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0655;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91063.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 55085 56095 . - . ID=gene-HMPREF7215_0656;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0656 GCA_000177335.1|ADFP01000051.1 Genbank CDS 55085 56095 . - 0 ID=cds-EFB91064.1;Parent=gene-HMPREF7215_0656;Dbxref=NCBI_GP:EFB91064.1;Name=EFB91064.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181;gbkey=CDS;gene=rfbB;locus_tag=HMPREF7215_0656;product=dTDP-glucose 4%2C6-dehydratase;protein_id=EFB91064.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 56138 57022 . - . ID=gene-HMPREF7215_0657;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0657 GCA_000177335.1|ADFP01000051.1 Genbank CDS 56138 57022 . - 0 ID=cds-EFB91065.1;Parent=gene-HMPREF7215_0657;Dbxref=NCBI_GP:EFB91065.1;Name=EFB91065.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207;gbkey=CDS;gene=rfbA;locus_tag=HMPREF7215_0657;product=glucose-1-phosphate thymidylyltransferase;protein_id=EFB91065.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 57236 58192 . + . ID=gene-HMPREF7215_0658;Name=HMPREF7215_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0658 GCA_000177335.1|ADFP01000051.1 Genbank CDS 57236 58192 . + 0 ID=cds-EFB91066.1;Parent=gene-HMPREF7215_0658;Dbxref=NCBI_GP:EFB91066.1;Name=EFB91066.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_0658;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB91066.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 58304 59452 . - . ID=gene-HMPREF7215_0659;Name=HMPREF7215_0659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0659 GCA_000177335.1|ADFP01000051.1 Genbank CDS 58304 59452 . - 0 ID=cds-EFB91067.1;Parent=gene-HMPREF7215_0659;Dbxref=NCBI_GP:EFB91067.1;Name=EFB91067.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF7215_0659;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFB91067.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 59453 60760 . - . ID=gene-HMPREF7215_0660;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0660 GCA_000177335.1|ADFP01000051.1 Genbank CDS 59453 60760 . - 0 ID=cds-EFB91068.1;Parent=gene-HMPREF7215_0660;Dbxref=NCBI_GP:EFB91068.1;Name=EFB91068.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR02320;gbkey=CDS;gene=aepX;locus_tag=HMPREF7215_0660;product=phosphoenolpyruvate mutase;protein_id=EFB91068.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 60767 61486 . - . ID=gene-HMPREF7215_0661;Name=HMPREF7215_0661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0661 GCA_000177335.1|ADFP01000051.1 Genbank CDS 60767 61486 . - 0 ID=cds-EFB91069.1;Parent=gene-HMPREF7215_0661;Dbxref=NCBI_GP:EFB91069.1;Name=EFB91069.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0661;product=hypothetical protein;protein_id=EFB91069.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 61492 62622 . - . ID=gene-HMPREF7215_0662;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0662 GCA_000177335.1|ADFP01000051.1 Genbank CDS 61492 62622 . - 0 ID=cds-EFB91070.1;Parent=gene-HMPREF7215_0662;Dbxref=NCBI_GP:EFB91070.1;Name=EFB91070.1;Note=identified by match to protein family HMM PF02775%3B match to protein family HMM TIGR03297;gbkey=CDS;gene=aepY;locus_tag=HMPREF7215_0662;product=phosphonopyruvate decarboxylase;protein_id=EFB91070.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 62677 63861 . - . ID=gene-HMPREF7215_0663;Name=HMPREF7215_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0663 GCA_000177335.1|ADFP01000051.1 Genbank CDS 62677 63861 . - 0 ID=cds-EFB91071.1;Parent=gene-HMPREF7215_0663;Dbxref=NCBI_GP:EFB91071.1;Name=EFB91071.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_0663;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB91071.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 63858 65381 . - . ID=gene-HMPREF7215_0664;Name=HMPREF7215_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0664 GCA_000177335.1|ADFP01000051.1 Genbank CDS 63858 65381 . - 0 ID=cds-EFB91072.1;Parent=gene-HMPREF7215_0664;Dbxref=NCBI_GP:EFB91072.1;Name=EFB91072.1;Note=identified by match to protein family HMM PF04464;gbkey=CDS;locus_tag=HMPREF7215_0664;product=CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase;protein_id=EFB91072.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 65416 66597 . - . ID=gene-HMPREF7215_0665;Name=HMPREF7215_0665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0665 GCA_000177335.1|ADFP01000051.1 Genbank CDS 65416 66597 . - 0 ID=cds-EFB91073.1;Parent=gene-HMPREF7215_0665;Dbxref=NCBI_GP:EFB91073.1;Name=EFB91073.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF7215_0665;product=glycosyltransferase%2C group 2 family protein;protein_id=EFB91073.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 66657 67139 . - . ID=gene-HMPREF7215_0666;Name=HMPREF7215_0666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0666 GCA_000177335.1|ADFP01000051.1 Genbank CDS 66657 67139 . - 0 ID=cds-EFB91074.1;Parent=gene-HMPREF7215_0666;Dbxref=NCBI_GP:EFB91074.1;Name=EFB91074.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;locus_tag=HMPREF7215_0666;product=bacterial transferase hexapeptide repeat protein;protein_id=EFB91074.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 67142 68248 . - . ID=gene-HMPREF7215_0667;Name=HMPREF7215_0667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0667 GCA_000177335.1|ADFP01000051.1 Genbank CDS 67142 68248 . - 0 ID=cds-EFB91075.1;Parent=gene-HMPREF7215_0667;Dbxref=NCBI_GP:EFB91075.1;Name=EFB91075.1;Note=identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_0667;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=EFB91075.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 68253 68660 . - . ID=gene-HMPREF7215_0668;Name=wxcM;gbkey=Gene;gene=wxcM;gene_biotype=protein_coding;locus_tag=HMPREF7215_0668 GCA_000177335.1|ADFP01000051.1 Genbank CDS 68253 68660 . - 0 ID=cds-EFB91076.1;Parent=gene-HMPREF7215_0668;Dbxref=NCBI_GP:EFB91076.1;Name=EFB91076.1;Note=identified by match to protein family HMM PF05523;gbkey=CDS;gene=wxcM;locus_tag=HMPREF7215_0668;product=WxcM-like protein;protein_id=EFB91076.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 69283 69672 . + . ID=gene-HMPREF7215_0669;Name=HMPREF7215_0669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0669 GCA_000177335.1|ADFP01000051.1 Genbank CDS 69283 69672 . + 0 ID=cds-EFB91077.1;Parent=gene-HMPREF7215_0669;Dbxref=NCBI_GP:EFB91077.1;Name=EFB91077.1;gbkey=CDS;locus_tag=HMPREF7215_0669;product=hypothetical protein;protein_id=EFB91077.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 69997 70800 . - . ID=gene-HMPREF7215_0670;Name=HMPREF7215_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0670 GCA_000177335.1|ADFP01000051.1 Genbank CDS 69997 70800 . - 0 ID=cds-EFB91078.1;Parent=gene-HMPREF7215_0670;Dbxref=NCBI_GP:EFB91078.1;Name=EFB91078.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=HMPREF7215_0670;product=transposase%2C IS4 family;protein_id=EFB91078.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 71088 71432 . + . ID=gene-HMPREF7215_0671;Name=HMPREF7215_0671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0671 GCA_000177335.1|ADFP01000051.1 Genbank CDS 71088 71432 . + 0 ID=cds-EFB91079.1;Parent=gene-HMPREF7215_0671;Dbxref=NCBI_GP:EFB91079.1;Name=EFB91079.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0671;product=transposase;protein_id=EFB91079.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 71557 72852 . + . ID=gene-HMPREF7215_0672;Name=HMPREF7215_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0672 GCA_000177335.1|ADFP01000051.1 Genbank CDS 71557 72852 . + 0 ID=cds-EFB91080.1;Parent=gene-HMPREF7215_0672;Dbxref=NCBI_GP:EFB91080.1;Name=EFB91080.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0672;product=hypothetical protein;protein_id=EFB91080.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 72960 73076 . + . ID=gene-HMPREF7215_0673;Name=HMPREF7215_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0673 GCA_000177335.1|ADFP01000051.1 Genbank CDS 72960 73076 . + 0 ID=cds-EFB91081.1;Parent=gene-HMPREF7215_0673;Dbxref=NCBI_GP:EFB91081.1;Name=EFB91081.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0673;product=hypothetical protein;protein_id=EFB91081.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 73554 73733 . - . ID=gene-HMPREF7215_0674;Name=HMPREF7215_0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0674 GCA_000177335.1|ADFP01000051.1 Genbank CDS 73554 73733 . - 0 ID=cds-EFB91082.1;Parent=gene-HMPREF7215_0674;Dbxref=NCBI_GP:EFB91082.1;Name=EFB91082.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0674;product=hypothetical protein;protein_id=EFB91082.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 74097 75254 . - . ID=gene-HMPREF7215_0675;Name=HMPREF7215_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0675 GCA_000177335.1|ADFP01000051.1 Genbank CDS 74097 75254 . - 0 ID=cds-EFB91083.1;Parent=gene-HMPREF7215_0675;Dbxref=NCBI_GP:EFB91083.1;Name=EFB91083.1;gbkey=CDS;locus_tag=HMPREF7215_0675;product=hypothetical protein;protein_id=EFB91083.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 75535 75690 . + . ID=gene-HMPREF7215_0676;Name=HMPREF7215_0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0676 GCA_000177335.1|ADFP01000051.1 Genbank CDS 75535 75690 . + 0 ID=cds-EFB91084.1;Parent=gene-HMPREF7215_0676;Dbxref=NCBI_GP:EFB91084.1;Name=EFB91084.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0676;product=hypothetical protein;protein_id=EFB91084.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 75765 77117 . - . ID=gene-HMPREF7215_0677;Name=HMPREF7215_0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0677 GCA_000177335.1|ADFP01000051.1 Genbank CDS 75765 77117 . - 0 ID=cds-EFB91085.1;Parent=gene-HMPREF7215_0677;Dbxref=NCBI_GP:EFB91085.1;Name=EFB91085.1;gbkey=CDS;locus_tag=HMPREF7215_0677;product=hypothetical protein;protein_id=EFB91085.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 77348 77494 . + . ID=gene-HMPREF7215_0678;Name=HMPREF7215_0678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0678 GCA_000177335.1|ADFP01000051.1 Genbank CDS 77348 77494 . + 0 ID=cds-EFB91086.1;Parent=gene-HMPREF7215_0678;Dbxref=NCBI_GP:EFB91086.1;Name=EFB91086.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0678;product=hypothetical protein;protein_id=EFB91086.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 77469 77672 . + . ID=gene-HMPREF7215_0679;Name=HMPREF7215_0679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0679 GCA_000177335.1|ADFP01000051.1 Genbank CDS 77469 77672 . + 0 ID=cds-EFB91087.1;Parent=gene-HMPREF7215_0679;Dbxref=NCBI_GP:EFB91087.1;Name=EFB91087.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0679;product=hypothetical protein;protein_id=EFB91087.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 77893 78168 . - . ID=gene-HMPREF7215_0680;Name=HMPREF7215_0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0680 GCA_000177335.1|ADFP01000051.1 Genbank CDS 77893 78168 . - 0 ID=cds-EFB91088.1;Parent=gene-HMPREF7215_0680;Dbxref=NCBI_GP:EFB91088.1;Name=EFB91088.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_0680;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91088.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 78161 78433 . - . ID=gene-HMPREF7215_0681;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0681 GCA_000177335.1|ADFP01000051.1 Genbank CDS 78161 78433 . - 0 ID=cds-EFB91089.1;Parent=gene-HMPREF7215_0681;Dbxref=NCBI_GP:EFB91089.1;Name=EFB91089.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;gene=dinJ;locus_tag=HMPREF7215_0681;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91089.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 78913 79158 . - . ID=gene-HMPREF7215_0682;Name=HMPREF7215_0682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0682 GCA_000177335.1|ADFP01000051.1 Genbank CDS 78913 79158 . - 0 ID=cds-EFB91090.1;Parent=gene-HMPREF7215_0682;Dbxref=NCBI_GP:EFB91090.1;Name=EFB91090.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0682;product=hypothetical protein;protein_id=EFB91090.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 79206 79340 . + . ID=gene-HMPREF7215_0684;Name=HMPREF7215_0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0684 GCA_000177335.1|ADFP01000051.1 Genbank CDS 79206 79340 . + 0 ID=cds-EFB91091.1;Parent=gene-HMPREF7215_0684;Dbxref=NCBI_GP:EFB91091.1;Name=EFB91091.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0684;product=hypothetical protein;protein_id=EFB91091.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 79295 79417 . - . ID=gene-HMPREF7215_0683;Name=HMPREF7215_0683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0683 GCA_000177335.1|ADFP01000051.1 Genbank CDS 79295 79417 . - 0 ID=cds-EFB91092.1;Parent=gene-HMPREF7215_0683;Dbxref=NCBI_GP:EFB91092.1;Name=EFB91092.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0683;product=hypothetical protein;protein_id=EFB91092.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 79877 82336 . - . ID=gene-HMPREF7215_0685;Name=HMPREF7215_0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0685 GCA_000177335.1|ADFP01000051.1 Genbank CDS 79877 82336 . - 0 ID=cds-EFB91093.1;Parent=gene-HMPREF7215_0685;Dbxref=NCBI_GP:EFB91093.1;Name=EFB91093.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=HMPREF7215_0685;product=peptidase%2C U32 family;protein_id=EFB91093.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 82571 83530 . + . ID=gene-HMPREF7215_0687;Name=HMPREF7215_0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0687 GCA_000177335.1|ADFP01000051.1 Genbank CDS 82571 83530 . + 0 ID=cds-EFB91094.1;Parent=gene-HMPREF7215_0687;Dbxref=NCBI_GP:EFB91094.1;Name=EFB91094.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_0687;product=LysR substrate binding domain protein;protein_id=EFB91094.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 83505 83657 . - . ID=gene-HMPREF7215_0686;Name=HMPREF7215_0686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0686 GCA_000177335.1|ADFP01000051.1 Genbank CDS 83505 83657 . - 0 ID=cds-EFB91095.1;Parent=gene-HMPREF7215_0686;Dbxref=NCBI_GP:EFB91095.1;Name=EFB91095.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0686;product=hypothetical protein;protein_id=EFB91095.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 83663 84874 . + . ID=gene-HMPREF7215_0688;Name=HMPREF7215_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0688 GCA_000177335.1|ADFP01000051.1 Genbank CDS 83663 84874 . + 0 ID=cds-EFB91096.1;Parent=gene-HMPREF7215_0688;Dbxref=NCBI_GP:EFB91096.1;Name=EFB91096.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_0688;product=aminotransferase%2C class I/II;protein_id=EFB91096.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 84902 85054 . - . ID=gene-HMPREF7215_0689;Name=HMPREF7215_0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0689 GCA_000177335.1|ADFP01000051.1 Genbank CDS 84902 85054 . - 0 ID=cds-EFB91097.1;Parent=gene-HMPREF7215_0689;Dbxref=NCBI_GP:EFB91097.1;Name=EFB91097.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0689;product=hypothetical protein;protein_id=EFB91097.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 85259 86179 . + . ID=gene-HMPREF7215_0690;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0690 GCA_000177335.1|ADFP01000051.1 Genbank CDS 85259 86179 . + 0 ID=cds-EFB91098.1;Parent=gene-HMPREF7215_0690;Dbxref=NCBI_GP:EFB91098.1;Name=EFB91098.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;gene=oppB;locus_tag=HMPREF7215_0690;product=oligopeptide transport system permease protein OppB;protein_id=EFB91098.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 86193 87152 . + . ID=gene-HMPREF7215_0691;Name=HMPREF7215_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0691 GCA_000177335.1|ADFP01000051.1 Genbank CDS 86193 87152 . + 0 ID=cds-EFB91099.1;Parent=gene-HMPREF7215_0691;Dbxref=NCBI_GP:EFB91099.1;Name=EFB91099.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0691;product=ABC transporter%2C permease protein;protein_id=EFB91099.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 87174 88166 . + . ID=gene-HMPREF7215_0692;Name=HMPREF7215_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0692 GCA_000177335.1|ADFP01000051.1 Genbank CDS 87174 88166 . + 0 ID=cds-EFB91100.1;Parent=gene-HMPREF7215_0692;Dbxref=NCBI_GP:EFB91100.1;Name=EFB91100.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0692;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91100.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 88163 89119 . + . ID=gene-HMPREF7215_0693;Name=HMPREF7215_0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0693 GCA_000177335.1|ADFP01000051.1 Genbank CDS 88163 89119 . + 0 ID=cds-EFB91101.1;Parent=gene-HMPREF7215_0693;Dbxref=NCBI_GP:EFB91101.1;Name=EFB91101.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_0693;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91101.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 89172 90761 . + . ID=gene-HMPREF7215_0694;Name=HMPREF7215_0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0694 GCA_000177335.1|ADFP01000051.1 Genbank CDS 89172 90761 . + 0 ID=cds-EFB91102.1;Parent=gene-HMPREF7215_0694;Dbxref=NCBI_GP:EFB91102.1;Name=EFB91102.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_0694;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB91102.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 90900 92228 . - . ID=gene-HMPREF7215_0695;Name=HMPREF7215_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0695 GCA_000177335.1|ADFP01000051.1 Genbank CDS 90900 92228 . - 0 ID=cds-EFB91103.1;Parent=gene-HMPREF7215_0695;Dbxref=NCBI_GP:EFB91103.1;Name=EFB91103.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_0695;product=MATE efflux family protein;protein_id=EFB91103.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 92248 93846 . - . ID=gene-HMPREF7215_0696;Name=HMPREF7215_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0696 GCA_000177335.1|ADFP01000051.1 Genbank CDS 92248 93846 . - 0 ID=cds-EFB91104.1;Parent=gene-HMPREF7215_0696;Dbxref=NCBI_GP:EFB91104.1;Name=EFB91104.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0696;product=putative phosphonate C-P lyase system protein PhnK;protein_id=EFB91104.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 93849 94676 . - . ID=gene-HMPREF7215_0697;Name=HMPREF7215_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0697 GCA_000177335.1|ADFP01000051.1 Genbank CDS 93849 94676 . - 0 ID=cds-EFB91105.1;Parent=gene-HMPREF7215_0697;Dbxref=NCBI_GP:EFB91105.1;Name=EFB91105.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0697;product=ABC transporter%2C permease protein;protein_id=EFB91105.1;transl_table=11 GCA_000177335.1|ADFP01000051.1 Genbank gene 94673 95674 . - . ID=gene-HMPREF7215_0698;Name=HMPREF7215_0698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0698 GCA_000177335.1|ADFP01000051.1 Genbank CDS 94673 95674 . - 0 ID=cds-EFB91106.1;Parent=gene-HMPREF7215_0698;Dbxref=NCBI_GP:EFB91106.1;Name=EFB91106.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0698;product=ABC transporter%2C permease protein;protein_id=EFB91106.1;transl_table=11 ##sequence-region ADFP01000050.1 1 25216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000050.1 Genbank region 1 25216 . + . ID=ADFP01000050.1:1..25216;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000050.1 Genbank gene 1 140 . - . ID=gene-HMPREF7215_1251;Name=HMPREF7215_1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1251;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000050.1 Genbank CDS 1 140 . - 0 ID=cds-EFB91107.1;Parent=gene-HMPREF7215_1251;Dbxref=NCBI_GP:EFB91107.1;Name=EFB91107.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1251;partial=true;product=hypothetical protein;protein_id=EFB91107.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 142 1497 . - . ID=gene-HMPREF7215_1252;Name=HMPREF7215_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1252 GCA_000177335.1|ADFP01000050.1 Genbank CDS 142 1497 . - 0 ID=cds-EFB91108.1;Parent=gene-HMPREF7215_1252;Dbxref=NCBI_GP:EFB91108.1;Name=EFB91108.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF7215_1252;product=pyridine nucleotide-disulfide oxidoreductase%2C dimerization domain protein;protein_id=EFB91108.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 1775 3238 . - . ID=gene-HMPREF7215_1253;Name=HMPREF7215_1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1253 GCA_000177335.1|ADFP01000050.1 Genbank CDS 1775 3238 . - 0 ID=cds-EFB91109.1;Parent=gene-HMPREF7215_1253;Dbxref=NCBI_GP:EFB91109.1;Name=EFB91109.1;gbkey=CDS;locus_tag=HMPREF7215_1253;product=putative glycine dehydrogenase subunit 2;protein_id=EFB91109.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 3238 4608 . - . ID=gene-HMPREF7215_1254;Name=HMPREF7215_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1254 GCA_000177335.1|ADFP01000050.1 Genbank CDS 3238 4608 . - 0 ID=cds-EFB91110.1;Parent=gene-HMPREF7215_1254;Dbxref=NCBI_GP:EFB91110.1;Name=EFB91110.1;Note=identified by match to protein family HMM PF02347;gbkey=CDS;locus_tag=HMPREF7215_1254;product=glycine dehydrogenase (decarboxylating);protein_id=EFB91110.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 4700 5101 . - . ID=gene-HMPREF7215_1255;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=HMPREF7215_1255 GCA_000177335.1|ADFP01000050.1 Genbank CDS 4700 5101 . - 0 ID=cds-EFB91111.1;Parent=gene-HMPREF7215_1255;Dbxref=NCBI_GP:EFB91111.1;Name=EFB91111.1;Note=identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527;gbkey=CDS;gene=gcvH;locus_tag=HMPREF7215_1255;product=glycine cleavage system H protein;protein_id=EFB91111.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 5160 6266 . - . ID=gene-HMPREF7215_1256;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=HMPREF7215_1256 GCA_000177335.1|ADFP01000050.1 Genbank CDS 5160 6266 . - 0 ID=cds-EFB91112.1;Parent=gene-HMPREF7215_1256;Dbxref=NCBI_GP:EFB91112.1;Name=EFB91112.1;Note=identified by match to protein family HMM PF01571%3B match to protein family HMM PF08669%3B match to protein family HMM TIGR00528;gbkey=CDS;gene=gcvT;locus_tag=HMPREF7215_1256;product=aminomethyltransferase;protein_id=EFB91112.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 6398 7396 . - . ID=gene-HMPREF7215_1257;Name=HMPREF7215_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1257 GCA_000177335.1|ADFP01000050.1 Genbank CDS 6398 7396 . - 0 ID=cds-EFB91113.1;Parent=gene-HMPREF7215_1257;Dbxref=NCBI_GP:EFB91113.1;Name=EFB91113.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545;gbkey=CDS;locus_tag=HMPREF7215_1257;product=lipoyltransferase and lipoate-protein ligase;protein_id=EFB91113.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 7847 8035 . - . ID=gene-HMPREF7215_1258;Name=HMPREF7215_1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1258 GCA_000177335.1|ADFP01000050.1 Genbank CDS 7847 8035 . - 0 ID=cds-EFB91114.1;Parent=gene-HMPREF7215_1258;Dbxref=NCBI_GP:EFB91114.1;Name=EFB91114.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1258;product=hypothetical protein;protein_id=EFB91114.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 8226 8966 . + . ID=gene-HMPREF7215_1260;Name=HMPREF7215_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1260 GCA_000177335.1|ADFP01000050.1 Genbank CDS 8226 8966 . + 0 ID=cds-EFB91115.1;Parent=gene-HMPREF7215_1260;Dbxref=NCBI_GP:EFB91115.1;Name=EFB91115.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1260;product=transcriptional regulator%2C GntR family;protein_id=EFB91115.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 8923 9960 . - . ID=gene-HMPREF7215_1259;Name=HMPREF7215_1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1259 GCA_000177335.1|ADFP01000050.1 Genbank CDS 8923 9960 . - 0 ID=cds-EFB91116.1;Parent=gene-HMPREF7215_1259;Dbxref=NCBI_GP:EFB91116.1;Name=EFB91116.1;gbkey=CDS;locus_tag=HMPREF7215_1259;product=hypothetical protein;protein_id=EFB91116.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 9959 10075 . + . ID=gene-HMPREF7215_1262;Name=HMPREF7215_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1262 GCA_000177335.1|ADFP01000050.1 Genbank CDS 9959 10075 . + 0 ID=cds-EFB91117.1;Parent=gene-HMPREF7215_1262;Dbxref=NCBI_GP:EFB91117.1;Name=EFB91117.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1262;product=hypothetical protein;protein_id=EFB91117.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 10030 10788 . - . ID=gene-HMPREF7215_1261;Name=HMPREF7215_1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1261 GCA_000177335.1|ADFP01000050.1 Genbank CDS 10030 10788 . - 0 ID=cds-EFB91118.1;Parent=gene-HMPREF7215_1261;Dbxref=NCBI_GP:EFB91118.1;Name=EFB91118.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;locus_tag=HMPREF7215_1261;product=creatininase;protein_id=EFB91118.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 10787 10945 . + . ID=gene-HMPREF7215_1264;Name=HMPREF7215_1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1264 GCA_000177335.1|ADFP01000050.1 Genbank CDS 10787 10945 . + 0 ID=cds-EFB91119.1;Parent=gene-HMPREF7215_1264;Dbxref=NCBI_GP:EFB91119.1;Name=EFB91119.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1264;product=hypothetical protein;protein_id=EFB91119.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 10917 11687 . - . ID=gene-HMPREF7215_1263;Name=HMPREF7215_1263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1263 GCA_000177335.1|ADFP01000050.1 Genbank CDS 10917 11687 . - 0 ID=cds-EFB91120.1;Parent=gene-HMPREF7215_1263;Dbxref=NCBI_GP:EFB91120.1;Name=EFB91120.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;locus_tag=HMPREF7215_1263;product=creatininase;protein_id=EFB91120.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 11841 13373 . - . ID=gene-HMPREF7215_1265;Name=HMPREF7215_1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1265 GCA_000177335.1|ADFP01000050.1 Genbank CDS 11841 13373 . - 0 ID=cds-EFB91121.1;Parent=gene-HMPREF7215_1265;Dbxref=NCBI_GP:EFB91121.1;Name=EFB91121.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1265;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB91121.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 13462 14424 . - . ID=gene-HMPREF7215_1266;Name=HMPREF7215_1266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1266 GCA_000177335.1|ADFP01000050.1 Genbank CDS 13462 14424 . - 0 ID=cds-EFB91122.1;Parent=gene-HMPREF7215_1266;Dbxref=NCBI_GP:EFB91122.1;Name=EFB91122.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1266;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91122.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 14408 15406 . - . ID=gene-HMPREF7215_1267;Name=HMPREF7215_1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1267 GCA_000177335.1|ADFP01000050.1 Genbank CDS 14408 15406 . - 0 ID=cds-EFB91123.1;Parent=gene-HMPREF7215_1267;Dbxref=NCBI_GP:EFB91123.1;Name=EFB91123.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1267;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91123.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 15437 16354 . - . ID=gene-HMPREF7215_1268;Name=HMPREF7215_1268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1268 GCA_000177335.1|ADFP01000050.1 Genbank CDS 15437 16354 . - 0 ID=cds-EFB91124.1;Parent=gene-HMPREF7215_1268;Dbxref=NCBI_GP:EFB91124.1;Name=EFB91124.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1268;product=ABC transporter%2C permease protein;protein_id=EFB91124.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 16364 17317 . - . ID=gene-HMPREF7215_1269;Name=HMPREF7215_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1269 GCA_000177335.1|ADFP01000050.1 Genbank CDS 16364 17317 . - 0 ID=cds-EFB91125.1;Parent=gene-HMPREF7215_1269;Dbxref=NCBI_GP:EFB91125.1;Name=EFB91125.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1269;product=ABC transporter%2C permease protein;protein_id=EFB91125.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 17729 18451 . - . ID=gene-HMPREF7215_1270;Name=HMPREF7215_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1270 GCA_000177335.1|ADFP01000050.1 Genbank CDS 17729 18451 . - 0 ID=cds-EFB91126.1;Parent=gene-HMPREF7215_1270;Dbxref=NCBI_GP:EFB91126.1;Name=EFB91126.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1270;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91126.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 18452 19231 . - . ID=gene-HMPREF7215_1271;Name=HMPREF7215_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1271 GCA_000177335.1|ADFP01000050.1 Genbank CDS 18452 19231 . - 0 ID=cds-EFB91127.1;Parent=gene-HMPREF7215_1271;Dbxref=NCBI_GP:EFB91127.1;Name=EFB91127.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1271;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91127.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 19228 20154 . - . ID=gene-HMPREF7215_1272;Name=HMPREF7215_1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1272 GCA_000177335.1|ADFP01000050.1 Genbank CDS 19228 20154 . - 0 ID=cds-EFB91128.1;Parent=gene-HMPREF7215_1272;Dbxref=NCBI_GP:EFB91128.1;Name=EFB91128.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1272;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91128.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 20168 21121 . - . ID=gene-HMPREF7215_1273;Name=HMPREF7215_1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1273 GCA_000177335.1|ADFP01000050.1 Genbank CDS 20168 21121 . - 0 ID=cds-EFB91129.1;Parent=gene-HMPREF7215_1273;Dbxref=NCBI_GP:EFB91129.1;Name=EFB91129.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1273;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91129.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 21210 22361 . - . ID=gene-HMPREF7215_1274;Name=HMPREF7215_1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1274 GCA_000177335.1|ADFP01000050.1 Genbank CDS 21210 22361 . - 0 ID=cds-EFB91130.1;Parent=gene-HMPREF7215_1274;Dbxref=NCBI_GP:EFB91130.1;Name=EFB91130.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;locus_tag=HMPREF7215_1274;product=receptor family ligand-binding protein;protein_id=EFB91130.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 22473 22607 . - . ID=gene-HMPREF7215_1275;Name=HMPREF7215_1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1275 GCA_000177335.1|ADFP01000050.1 Genbank CDS 22473 22607 . - 0 ID=cds-EFB91131.1;Parent=gene-HMPREF7215_1275;Dbxref=NCBI_GP:EFB91131.1;Name=EFB91131.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1275;product=hypothetical protein;protein_id=EFB91131.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 22684 23565 . + . ID=gene-HMPREF7215_1276;Name=HMPREF7215_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1276 GCA_000177335.1|ADFP01000050.1 Genbank CDS 22684 23565 . + 0 ID=cds-EFB91132.1;Parent=gene-HMPREF7215_1276;Dbxref=NCBI_GP:EFB91132.1;Name=EFB91132.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1276;product=LysR substrate binding domain protein;protein_id=EFB91132.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 23645 24025 . - . ID=gene-HMPREF7215_1277;Name=HMPREF7215_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1277 GCA_000177335.1|ADFP01000050.1 Genbank CDS 23645 24025 . - 0 ID=cds-EFB91133.1;Parent=gene-HMPREF7215_1277;Dbxref=NCBI_GP:EFB91133.1;Name=EFB91133.1;Note=identified by match to protein family HMM PF02579;gbkey=CDS;locus_tag=HMPREF7215_1277;product=dinitrogenase iron-molybdenum cofactor;protein_id=EFB91133.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 24206 24862 . + . ID=gene-HMPREF7215_1278;Name=HMPREF7215_1278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1278 GCA_000177335.1|ADFP01000050.1 Genbank CDS 24206 24862 . + 0 ID=cds-EFB91134.1;Parent=gene-HMPREF7215_1278;Dbxref=NCBI_GP:EFB91134.1;Name=EFB91134.1;gbkey=CDS;locus_tag=HMPREF7215_1278;product=hypothetical protein;protein_id=EFB91134.1;transl_table=11 GCA_000177335.1|ADFP01000050.1 Genbank gene 24988 25216 . - . ID=gene-HMPREF7215_1279;Name=HMPREF7215_1279;end_range=25216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1279;partial=true GCA_000177335.1|ADFP01000050.1 Genbank CDS 24988 25216 . - 1 ID=cds-EFB91135.1;Parent=gene-HMPREF7215_1279;Dbxref=NCBI_GP:EFB91135.1;Name=EFB91135.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=25216,.;gbkey=CDS;locus_tag=HMPREF7215_1279;partial=true;product=hypothetical protein;protein_id=EFB91135.1;transl_table=11 ##sequence-region ADFP01000049.1 1 39065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000049.1 Genbank region 1 39065 . + . ID=ADFP01000049.1:1..39065;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000049.1 Genbank gene 298 2196 . - . ID=gene-HMPREF7215_1604;Name=HMPREF7215_1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1604 GCA_000177335.1|ADFP01000049.1 Genbank CDS 298 2196 . - 0 ID=cds-EFB91136.1;Parent=gene-HMPREF7215_1604;Dbxref=NCBI_GP:EFB91136.1;Name=EFB91136.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF7215_1604;product=arylsulfatase;protein_id=EFB91136.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 2376 3893 . - . ID=gene-HMPREF7215_1605;Name=HMPREF7215_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1605 GCA_000177335.1|ADFP01000049.1 Genbank CDS 2376 3893 . - 0 ID=cds-EFB91137.1;Parent=gene-HMPREF7215_1605;Dbxref=NCBI_GP:EFB91137.1;Name=EFB91137.1;Note=identified by match to protein family HMM PF00474;gbkey=CDS;locus_tag=HMPREF7215_1605;product=transporter%2C SSS family;protein_id=EFB91137.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 4038 4580 . - . ID=gene-HMPREF7215_1606;Name=HMPREF7215_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1606 GCA_000177335.1|ADFP01000049.1 Genbank CDS 4038 4580 . - 0 ID=cds-EFB91138.1;Parent=gene-HMPREF7215_1606;Dbxref=NCBI_GP:EFB91138.1;Name=EFB91138.1;Note=identified by match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF7215_1606;product=Rubrerythrin;protein_id=EFB91138.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 4579 4692 . + . ID=gene-HMPREF7215_1607;Name=HMPREF7215_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1607 GCA_000177335.1|ADFP01000049.1 Genbank CDS 4579 4692 . + 0 ID=cds-EFB91139.1;Parent=gene-HMPREF7215_1607;Dbxref=NCBI_GP:EFB91139.1;Name=EFB91139.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1607;product=hypothetical protein;protein_id=EFB91139.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 4709 5428 . - . ID=gene-HMPREF7215_1608;Name=HMPREF7215_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1608 GCA_000177335.1|ADFP01000049.1 Genbank CDS 4709 5428 . - 0 ID=cds-EFB91140.1;Parent=gene-HMPREF7215_1608;Dbxref=NCBI_GP:EFB91140.1;Name=EFB91140.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;locus_tag=HMPREF7215_1608;product=pseudouridylate synthase;protein_id=EFB91140.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 5531 5971 . - . ID=gene-HMPREF7215_1609;Name=HMPREF7215_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1609 GCA_000177335.1|ADFP01000049.1 Genbank CDS 5531 5971 . - 0 ID=cds-EFB91141.1;Parent=gene-HMPREF7215_1609;Dbxref=NCBI_GP:EFB91141.1;Name=EFB91141.1;gbkey=CDS;locus_tag=HMPREF7215_1609;product=hypothetical protein;protein_id=EFB91141.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 6145 8037 . - . ID=gene-HMPREF7215_1610;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1610 GCA_000177335.1|ADFP01000049.1 Genbank CDS 6145 8037 . - 0 ID=cds-EFB91142.1;Parent=gene-HMPREF7215_1610;Dbxref=NCBI_GP:EFB91142.1;Name=EFB91142.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136;gbkey=CDS;gene=gidA;locus_tag=HMPREF7215_1610;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=EFB91142.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 8054 8704 . - . ID=gene-HMPREF7215_1611;Name=HMPREF7215_1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1611 GCA_000177335.1|ADFP01000049.1 Genbank CDS 8054 8704 . - 0 ID=cds-EFB91143.1;Parent=gene-HMPREF7215_1611;Dbxref=NCBI_GP:EFB91143.1;Name=EFB91143.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1611;product=hypothetical protein;protein_id=EFB91143.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 8733 9791 . - . ID=gene-HMPREF7215_1612;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1612 GCA_000177335.1|ADFP01000049.1 Genbank CDS 8733 9791 . - 0 ID=cds-EFB91144.1;Parent=gene-HMPREF7215_1612;Dbxref=NCBI_GP:EFB91144.1;Name=EFB91144.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611;gbkey=CDS;gene=recF;locus_tag=HMPREF7215_1612;product=DNA replication and repair protein RecF;protein_id=EFB91144.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 9798 10955 . - . ID=gene-HMPREF7215_1613;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=HMPREF7215_1613 GCA_000177335.1|ADFP01000049.1 Genbank CDS 9798 10955 . - 0 ID=cds-EFB91145.1;Parent=gene-HMPREF7215_1613;Dbxref=NCBI_GP:EFB91145.1;Name=EFB91145.1;Note=identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;locus_tag=HMPREF7215_1613;product=DNA polymerase III%2C beta subunit;protein_id=EFB91145.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 10984 11136 . - . ID=gene-HMPREF7215_1614;Name=HMPREF7215_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1614 GCA_000177335.1|ADFP01000049.1 Genbank CDS 10984 11136 . - 0 ID=cds-EFB91146.1;Parent=gene-HMPREF7215_1614;Dbxref=NCBI_GP:EFB91146.1;Name=EFB91146.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1614;product=hypothetical protein;protein_id=EFB91146.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 11204 12520 . - . ID=gene-HMPREF7215_1615;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1615 GCA_000177335.1|ADFP01000049.1 Genbank CDS 11204 12520 . - 0 ID=cds-EFB91147.1;Parent=gene-HMPREF7215_1615;Dbxref=NCBI_GP:EFB91147.1;Name=EFB91147.1;Note=identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362;gbkey=CDS;gene=dnaA;locus_tag=HMPREF7215_1615;product=chromosomal replication initiator protein DnaA;protein_id=EFB91147.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 12704 12820 . - . ID=gene-HMPREF7215_1616;Name=HMPREF7215_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1616 GCA_000177335.1|ADFP01000049.1 Genbank CDS 12704 12820 . - 0 ID=cds-EFB91148.1;Parent=gene-HMPREF7215_1616;Dbxref=NCBI_GP:EFB91148.1;Name=EFB91148.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1616;product=hypothetical protein;protein_id=EFB91148.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 12819 14012 . + . ID=gene-HMPREF7215_1617;Name=HMPREF7215_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1617 GCA_000177335.1|ADFP01000049.1 Genbank CDS 12819 14012 . + 0 ID=cds-EFB91149.1;Parent=gene-HMPREF7215_1617;Dbxref=NCBI_GP:EFB91149.1;Name=EFB91149.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01977;gbkey=CDS;locus_tag=HMPREF7215_1617;product=cysteine desulfurase family protein;protein_id=EFB91149.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 14244 14759 . + . ID=gene-HMPREF7215_1618;Name=HMPREF7215_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1618 GCA_000177335.1|ADFP01000049.1 Genbank CDS 14244 14759 . + 0 ID=cds-EFB91150.1;Parent=gene-HMPREF7215_1618;Dbxref=NCBI_GP:EFB91150.1;Name=EFB91150.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF7215_1618;product=nitroreductase family protein;protein_id=EFB91150.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 14881 16107 . - . ID=gene-HMPREF7215_1619;Name=HMPREF7215_1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1619 GCA_000177335.1|ADFP01000049.1 Genbank CDS 14881 16107 . - 0 ID=cds-EFB91151.1;Parent=gene-HMPREF7215_1619;Dbxref=NCBI_GP:EFB91151.1;Name=EFB91151.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580;gbkey=CDS;locus_tag=HMPREF7215_1619;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB91151.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 16100 17164 . - . ID=gene-HMPREF7215_1620;Name=HMPREF7215_1620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1620 GCA_000177335.1|ADFP01000049.1 Genbank CDS 16100 17164 . - 0 ID=cds-EFB91152.1;Parent=gene-HMPREF7215_1620;Dbxref=NCBI_GP:EFB91152.1;Name=EFB91152.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF7215_1620;product=response regulator receiver domain protein;protein_id=EFB91152.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 17328 18017 . + . ID=gene-HMPREF7215_1621;Name=HMPREF7215_1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1621 GCA_000177335.1|ADFP01000049.1 Genbank CDS 17328 18017 . + 0 ID=cds-EFB91153.1;Parent=gene-HMPREF7215_1621;Dbxref=NCBI_GP:EFB91153.1;Name=EFB91153.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=HMPREF7215_1621;product=isochorismatase family protein;protein_id=EFB91153.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 18046 19407 . + . ID=gene-HMPREF7215_1623;Name=HMPREF7215_1623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1623 GCA_000177335.1|ADFP01000049.1 Genbank CDS 18046 19407 . + 0 ID=cds-EFB91154.1;Parent=gene-HMPREF7215_1623;Dbxref=NCBI_GP:EFB91154.1;Name=EFB91154.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF7215_1623;product=amino acid permease;protein_id=EFB91154.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 19365 19577 . - . ID=gene-HMPREF7215_1622;Name=HMPREF7215_1622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1622 GCA_000177335.1|ADFP01000049.1 Genbank CDS 19365 19577 . - 0 ID=cds-EFB91155.1;Parent=gene-HMPREF7215_1622;Dbxref=NCBI_GP:EFB91155.1;Name=EFB91155.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1622;product=hypothetical protein;protein_id=EFB91155.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 19574 20245 . - . ID=gene-HMPREF7215_1624;Name=HMPREF7215_1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1624 GCA_000177335.1|ADFP01000049.1 Genbank CDS 19574 20245 . - 0 ID=cds-EFB91156.1;Parent=gene-HMPREF7215_1624;Dbxref=NCBI_GP:EFB91156.1;Name=EFB91156.1;Note=identified by match to protein family HMM PF01205;gbkey=CDS;locus_tag=HMPREF7215_1624;product=putative YigZ family protein;protein_id=EFB91156.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 20233 20718 . - . ID=gene-HMPREF7215_1625;Name=HMPREF7215_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1625 GCA_000177335.1|ADFP01000049.1 Genbank CDS 20233 20718 . - 0 ID=cds-EFB91157.1;Parent=gene-HMPREF7215_1625;Dbxref=NCBI_GP:EFB91157.1;Name=EFB91157.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=HMPREF7215_1625;product=histidine triad domain protein;protein_id=EFB91157.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 20908 21180 . - . ID=gene-HMPREF7215_1626;Name=HMPREF7215_1626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1626 GCA_000177335.1|ADFP01000049.1 Genbank CDS 20908 21180 . - 0 ID=cds-EFB91158.1;Parent=gene-HMPREF7215_1626;Dbxref=NCBI_GP:EFB91158.1;Name=EFB91158.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1626;product=hypothetical protein;protein_id=EFB91158.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 21198 21437 . - . ID=gene-HMPREF7215_1627;Name=HMPREF7215_1627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1627 GCA_000177335.1|ADFP01000049.1 Genbank CDS 21198 21437 . - 0 ID=cds-EFB91159.1;Parent=gene-HMPREF7215_1627;Dbxref=NCBI_GP:EFB91159.1;Name=EFB91159.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1627;product=hypothetical protein;protein_id=EFB91159.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 21438 22397 . - . ID=gene-HMPREF7215_1628;Name=spo0J;gbkey=Gene;gene=spo0J;gene_biotype=protein_coding;locus_tag=HMPREF7215_1628 GCA_000177335.1|ADFP01000049.1 Genbank CDS 21438 22397 . - 0 ID=cds-EFB91160.1;Parent=gene-HMPREF7215_1628;Dbxref=NCBI_GP:EFB91160.1;Name=EFB91160.1;Note=identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;gene=spo0J;locus_tag=HMPREF7215_1628;product=stage 0 sporulation protein J;protein_id=EFB91160.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 22388 23149 . - . ID=gene-HMPREF7215_1629;Name=soj;gbkey=Gene;gene=soj;gene_biotype=protein_coding;locus_tag=HMPREF7215_1629 GCA_000177335.1|ADFP01000049.1 Genbank CDS 22388 23149 . - 0 ID=cds-EFB91161.1;Parent=gene-HMPREF7215_1629;Dbxref=NCBI_GP:EFB91161.1;Name=EFB91161.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;gene=soj;locus_tag=HMPREF7215_1629;product=CobQ/CobB/MinD/ParA nucleotide binding domain protein;protein_id=EFB91161.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 23154 23840 . - . ID=gene-HMPREF7215_1630;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1630 GCA_000177335.1|ADFP01000049.1 Genbank CDS 23154 23840 . - 0 ID=cds-EFB91162.1;Parent=gene-HMPREF7215_1630;Dbxref=NCBI_GP:EFB91162.1;Name=EFB91162.1;Note=identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138;gbkey=CDS;gene=gidB;locus_tag=HMPREF7215_1630;product=16S rRNA methyltransferase GidB;protein_id=EFB91162.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 23839 24495 . + . ID=gene-HMPREF7215_1631;Name=HMPREF7215_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1631 GCA_000177335.1|ADFP01000049.1 Genbank CDS 23839 24495 . + 0 ID=cds-EFB91163.1;Parent=gene-HMPREF7215_1631;Dbxref=NCBI_GP:EFB91163.1;Name=EFB91163.1;gbkey=CDS;locus_tag=HMPREF7215_1631;product=hypothetical protein;protein_id=EFB91163.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 24723 26057 . - . ID=gene-HMPREF7215_1632;Name=HMPREF7215_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1632 GCA_000177335.1|ADFP01000049.1 Genbank CDS 24723 26057 . - 0 ID=cds-EFB91164.1;Parent=gene-HMPREF7215_1632;Dbxref=NCBI_GP:EFB91164.1;Name=EFB91164.1;Note=identified by match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;locus_tag=HMPREF7215_1632;product=citrate transporter;protein_id=EFB91164.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 26081 27670 . - . ID=gene-HMPREF7215_1633;Name=HMPREF7215_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1633 GCA_000177335.1|ADFP01000049.1 Genbank CDS 26081 27670 . - 0 ID=cds-EFB91165.1;Parent=gene-HMPREF7215_1633;Dbxref=NCBI_GP:EFB91165.1;Name=EFB91165.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07908%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1633;product=amidohydrolase family protein;protein_id=EFB91165.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 28044 28484 . + . ID=gene-HMPREF7215_1634;Name=HMPREF7215_1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1634 GCA_000177335.1|ADFP01000049.1 Genbank CDS 28044 28484 . + 0 ID=cds-EFB91166.1;Parent=gene-HMPREF7215_1634;Dbxref=NCBI_GP:EFB91166.1;Name=EFB91166.1;Note=identified by similarity to GB:AAM07594.1;gbkey=CDS;locus_tag=HMPREF7215_1634;product=hypothetical protein;protein_id=EFB91166.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 28760 29317 . + . ID=gene-HMPREF7215_1635;Name=HMPREF7215_1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1635 GCA_000177335.1|ADFP01000049.1 Genbank CDS 28760 29317 . + 0 ID=cds-EFB91167.1;Parent=gene-HMPREF7215_1635;Dbxref=NCBI_GP:EFB91167.1;Name=EFB91167.1;Note=2.7.7.7;gbkey=CDS;locus_tag=HMPREF7215_1635;product=hypothetical protein;protein_id=EFB91167.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 29423 29692 . - . ID=gene-HMPREF7215_1636;Name=HMPREF7215_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1636 GCA_000177335.1|ADFP01000049.1 Genbank CDS 29423 29692 . - 0 ID=cds-EFB91168.1;Parent=gene-HMPREF7215_1636;Dbxref=NCBI_GP:EFB91168.1;Name=EFB91168.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1636;product=hypothetical protein;protein_id=EFB91168.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 29691 30071 . + . ID=gene-HMPREF7215_1637;Name=HMPREF7215_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1637 GCA_000177335.1|ADFP01000049.1 Genbank CDS 29691 30071 . + 0 ID=cds-EFB91169.1;Parent=gene-HMPREF7215_1637;Dbxref=NCBI_GP:EFB91169.1;Name=EFB91169.1;Note=identified by match to protein family HMM PF01638;gbkey=CDS;locus_tag=HMPREF7215_1637;product=transcriptional regulator%2C HxlR family;protein_id=EFB91169.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 30087 30596 . + . ID=gene-HMPREF7215_1638;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1638 GCA_000177335.1|ADFP01000049.1 Genbank CDS 30087 30596 . + 0 ID=cds-EFB91170.1;Parent=gene-HMPREF7215_1638;Dbxref=NCBI_GP:EFB91170.1;Name=EFB91170.1;Note=identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401;gbkey=CDS;gene=msrA;locus_tag=HMPREF7215_1638;product=peptide-methionine (S)-S-oxide reductase;protein_id=EFB91170.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 30644 31771 . + . ID=gene-HMPREF7215_1639;Name=HMPREF7215_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1639 GCA_000177335.1|ADFP01000049.1 Genbank CDS 30644 31771 . + 0 ID=cds-EFB91171.1;Parent=gene-HMPREF7215_1639;Dbxref=NCBI_GP:EFB91171.1;Name=EFB91171.1;Note=identified by match to protein family HMM PF03977%3B match to protein family HMM TIGR01109;gbkey=CDS;locus_tag=HMPREF7215_1639;product=sodium ion-translocating decarboxylase%2C beta subunit;protein_id=EFB91171.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 31909 32976 . + . ID=gene-HMPREF7215_1640;Name=HMPREF7215_1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1640 GCA_000177335.1|ADFP01000049.1 Genbank CDS 31909 32976 . + 0 ID=cds-EFB91172.1;Parent=gene-HMPREF7215_1640;Dbxref=NCBI_GP:EFB91172.1;Name=EFB91172.1;Note=identified by match to protein family HMM PF03576;gbkey=CDS;locus_tag=HMPREF7215_1640;product=peptidase family T4;protein_id=EFB91172.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 33178 34560 . + . ID=gene-HMPREF7215_1641;Name=HMPREF7215_1641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1641 GCA_000177335.1|ADFP01000049.1 Genbank CDS 33178 34560 . + 0 ID=cds-EFB91173.1;Parent=gene-HMPREF7215_1641;Dbxref=NCBI_GP:EFB91173.1;Name=EFB91173.1;Note=identified by match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1641;product=amidohydrolase;protein_id=EFB91173.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 34838 35779 . + . ID=gene-HMPREF7215_1642;Name=HMPREF7215_1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1642 GCA_000177335.1|ADFP01000049.1 Genbank CDS 34838 35779 . + 0 ID=cds-EFB91174.1;Parent=gene-HMPREF7215_1642;Dbxref=NCBI_GP:EFB91174.1;Name=EFB91174.1;Note=identified by match to protein family HMM PF03547;gbkey=CDS;locus_tag=HMPREF7215_1642;product=transporter%2C auxin efflux carrier (AEC) family protein;protein_id=EFB91174.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 35782 36501 . - . ID=gene-HMPREF7215_1643;Name=HMPREF7215_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1643 GCA_000177335.1|ADFP01000049.1 Genbank CDS 35782 36501 . - 0 ID=cds-EFB91175.1;Parent=gene-HMPREF7215_1643;Dbxref=NCBI_GP:EFB91175.1;Name=EFB91175.1;Note=identified by match to protein family HMM PF01863;gbkey=CDS;locus_tag=HMPREF7215_1643;product=hypothetical protein;protein_id=EFB91175.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 36826 37116 . - . ID=gene-HMPREF7215_1644;Name=HMPREF7215_1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1644 GCA_000177335.1|ADFP01000049.1 Genbank CDS 36826 37116 . - 0 ID=cds-EFB91176.1;Parent=gene-HMPREF7215_1644;Dbxref=NCBI_GP:EFB91176.1;Name=EFB91176.1;gbkey=CDS;locus_tag=HMPREF7215_1644;product=hypothetical protein;protein_id=EFB91176.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 37290 37688 . + . ID=gene-HMPREF7215_1645;Name=HMPREF7215_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1645 GCA_000177335.1|ADFP01000049.1 Genbank CDS 37290 37688 . + 0 ID=cds-EFB91177.1;Parent=gene-HMPREF7215_1645;Dbxref=NCBI_GP:EFB91177.1;Name=EFB91177.1;Note=identified by match to protein family HMM PF01638;gbkey=CDS;locus_tag=HMPREF7215_1645;product=transcriptional regulator%2C HxlR family;protein_id=EFB91177.1;transl_table=11 GCA_000177335.1|ADFP01000049.1 Genbank gene 37828 38964 . - . ID=gene-HMPREF7215_1646;Name=HMPREF7215_1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1646 GCA_000177335.1|ADFP01000049.1 Genbank CDS 37828 38964 . - 0 ID=cds-EFB91178.1;Parent=gene-HMPREF7215_1646;Dbxref=NCBI_GP:EFB91178.1;Name=EFB91178.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF7215_1646;product=peptidase dimerization domain protein;protein_id=EFB91178.1;transl_table=11 ##sequence-region ADFP01000048.1 1 3344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000048.1 Genbank region 1 3344 . + . ID=ADFP01000048.1:1..3344;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000048.1 Genbank gene 9 1043 . + . ID=gene-HMPREF7215_2217;Name=HMPREF7215_2217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2217 GCA_000177335.1|ADFP01000048.1 Genbank CDS 9 1043 . + 0 ID=cds-EFB91179.1;Parent=gene-HMPREF7215_2217;Dbxref=NCBI_GP:EFB91179.1;Name=EFB91179.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2217;product=hypothetical protein;protein_id=EFB91179.1;transl_table=11 GCA_000177335.1|ADFP01000048.1 Genbank gene 1199 1585 . - . ID=gene-HMPREF7215_2218;Name=HMPREF7215_2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2218 GCA_000177335.1|ADFP01000048.1 Genbank CDS 1199 1585 . - 0 ID=cds-EFB91180.1;Parent=gene-HMPREF7215_2218;Dbxref=NCBI_GP:EFB91180.1;Name=EFB91180.1;Note=identified by match to protein family HMM PF05012%3B match to protein family HMM TIGR01550;gbkey=CDS;locus_tag=HMPREF7215_2218;product=death-on-curing family protein;protein_id=EFB91180.1;transl_table=11 GCA_000177335.1|ADFP01000048.1 Genbank gene 1572 1733 . - . ID=gene-HMPREF7215_2219;Name=HMPREF7215_2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2219 GCA_000177335.1|ADFP01000048.1 Genbank CDS 1572 1733 . - 0 ID=cds-EFB91181.1;Parent=gene-HMPREF7215_2219;Dbxref=NCBI_GP:EFB91181.1;Name=EFB91181.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2219;product=hypothetical protein;protein_id=EFB91181.1;transl_table=11 GCA_000177335.1|ADFP01000048.1 Genbank gene 1808 1996 . - . ID=gene-HMPREF7215_2220;Name=HMPREF7215_2220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2220 GCA_000177335.1|ADFP01000048.1 Genbank CDS 1808 1996 . - 0 ID=cds-EFB91182.1;Parent=gene-HMPREF7215_2220;Dbxref=NCBI_GP:EFB91182.1;Name=EFB91182.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2220;product=hypothetical protein;protein_id=EFB91182.1;transl_table=11 GCA_000177335.1|ADFP01000048.1 Genbank gene 2050 3344 . + . ID=gene-HMPREF7215_2221;Name=HMPREF7215_2221;end_range=3344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2221;partial=true GCA_000177335.1|ADFP01000048.1 Genbank CDS 2050 3344 . + 0 ID=cds-EFB91183.1;Parent=gene-HMPREF7215_2221;Dbxref=NCBI_GP:EFB91183.1;Name=EFB91183.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03023;end_range=3344,.;gbkey=CDS;locus_tag=HMPREF7215_2221;partial=true;product=virulence factor MVIN;protein_id=EFB91183.1;transl_table=11 ##sequence-region ADFP01000047.1 1 125203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000047.1 Genbank region 1 125203 . + . ID=ADFP01000047.1:1..125203;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000047.1 Genbank gene 119 1015 . + . ID=gene-HMPREF7215_0274;Name=HMPREF7215_0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0274 GCA_000177335.1|ADFP01000047.1 Genbank CDS 119 1015 . + 0 ID=cds-EFB91184.1;Parent=gene-HMPREF7215_0274;Dbxref=NCBI_GP:EFB91184.1;Name=EFB91184.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_0274;product=putative radical SAM protein%2C TIGR01212 family;protein_id=EFB91184.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 1084 2067 . - . ID=gene-HMPREF7215_0275;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0275 GCA_000177335.1|ADFP01000047.1 Genbank CDS 1084 2067 . - 0 ID=cds-EFB91185.1;Parent=gene-HMPREF7215_0275;Dbxref=NCBI_GP:EFB91185.1;Name=EFB91185.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF7215_0275;product=4-phosphoerythronate dehydrogenase;protein_id=EFB91185.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 2157 2513 . - . ID=gene-HMPREF7215_0276;Name=HMPREF7215_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0276 GCA_000177335.1|ADFP01000047.1 Genbank CDS 2157 2513 . - 0 ID=cds-EFB91186.1;Parent=gene-HMPREF7215_0276;Dbxref=NCBI_GP:EFB91186.1;Name=EFB91186.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0276;product=hypothetical protein;protein_id=EFB91186.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 2623 3366 . - . ID=gene-HMPREF7215_0277;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0277 GCA_000177335.1|ADFP01000047.1 Genbank CDS 2623 3366 . - 0 ID=cds-EFB91187.1;Parent=gene-HMPREF7215_0277;Dbxref=NCBI_GP:EFB91187.1;Name=EFB91187.1;Note=identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419;gbkey=CDS;gene=tpiA;locus_tag=HMPREF7215_0277;product=triose-phosphate isomerase;protein_id=EFB91187.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 3468 5552 . - . ID=gene-HMPREF7215_0278;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0278 GCA_000177335.1|ADFP01000047.1 Genbank CDS 3468 5552 . - 0 ID=cds-EFB91188.1;Parent=gene-HMPREF7215_0278;Dbxref=NCBI_GP:EFB91188.1;Name=EFB91188.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF7215_0278;product=translation elongation factor G;protein_id=EFB91188.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 5652 7124 . - . ID=gene-HMPREF7215_0279;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0279 GCA_000177335.1|ADFP01000047.1 Genbank CDS 5652 7124 . - 0 ID=cds-EFB91189.1;Parent=gene-HMPREF7215_0279;Dbxref=NCBI_GP:EFB91189.1;Name=EFB91189.1;Note=identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133;gbkey=CDS;gene=gatB;locus_tag=HMPREF7215_0279;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C B subunit;protein_id=EFB91189.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 7124 8584 . - . ID=gene-HMPREF7215_0280;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0280 GCA_000177335.1|ADFP01000047.1 Genbank CDS 7124 8584 . - 0 ID=cds-EFB91190.1;Parent=gene-HMPREF7215_0280;Dbxref=NCBI_GP:EFB91190.1;Name=EFB91190.1;Note=identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132;gbkey=CDS;gene=gatA;locus_tag=HMPREF7215_0280;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C A subunit;protein_id=EFB91190.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 8584 8880 . - . ID=gene-HMPREF7215_0281;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0281 GCA_000177335.1|ADFP01000047.1 Genbank CDS 8584 8880 . - 0 ID=cds-EFB91191.1;Parent=gene-HMPREF7215_0281;Dbxref=NCBI_GP:EFB91191.1;Name=EFB91191.1;Note=identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135;gbkey=CDS;gene=gatC;locus_tag=HMPREF7215_0281;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C C subunit;protein_id=EFB91191.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 8873 10918 . - . ID=gene-HMPREF7215_0282;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0282 GCA_000177335.1|ADFP01000047.1 Genbank CDS 8873 10918 . - 0 ID=cds-EFB91192.1;Parent=gene-HMPREF7215_0282;Dbxref=NCBI_GP:EFB91192.1;Name=EFB91192.1;Note=identified by match to protein family HMM PF00533%3B match to protein family HMM PF00633%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;locus_tag=HMPREF7215_0282;product=DNA ligase (NAD+);protein_id=EFB91192.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 11231 12787 . - . ID=gene-HMPREF7215_0283;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0283 GCA_000177335.1|ADFP01000047.1 Genbank CDS 11231 12787 . - 0 ID=cds-EFB91193.1;Parent=gene-HMPREF7215_0283;Dbxref=NCBI_GP:EFB91193.1;Name=EFB91193.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499;gbkey=CDS;gene=lysS;locus_tag=HMPREF7215_0283;product=lysine--tRNA ligase;protein_id=EFB91193.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 12789 13790 . - . ID=gene-HMPREF7215_0284;Name=HMPREF7215_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0284 GCA_000177335.1|ADFP01000047.1 Genbank CDS 12789 13790 . - 0 ID=cds-EFB91194.1;Parent=gene-HMPREF7215_0284;Dbxref=NCBI_GP:EFB91194.1;Name=EFB91194.1;Note=identified by match to protein family HMM PF01207;gbkey=CDS;locus_tag=HMPREF7215_0284;product=TIM-barrel protein%2C nifR3 family;protein_id=EFB91194.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 13813 15225 . - . ID=gene-HMPREF7215_0285;Name=HMPREF7215_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0285 GCA_000177335.1|ADFP01000047.1 Genbank CDS 13813 15225 . - 0 ID=cds-EFB91195.1;Parent=gene-HMPREF7215_0285;Dbxref=NCBI_GP:EFB91195.1;Name=EFB91195.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360;gbkey=CDS;locus_tag=HMPREF7215_0285;product=ComEC/Rec2-like protein;protein_id=EFB91195.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 15232 15849 . - . ID=gene-HMPREF7215_0286;Name=HMPREF7215_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0286 GCA_000177335.1|ADFP01000047.1 Genbank CDS 15232 15849 . - 0 ID=cds-EFB91196.1;Parent=gene-HMPREF7215_0286;Dbxref=NCBI_GP:EFB91196.1;Name=EFB91196.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426;gbkey=CDS;locus_tag=HMPREF7215_0286;product=comEA protein;protein_id=EFB91196.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 15874 17181 . - . ID=gene-HMPREF7215_0287;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0287 GCA_000177335.1|ADFP01000047.1 Genbank CDS 15874 17181 . - 0 ID=cds-EFB91197.1;Parent=gene-HMPREF7215_0287;Dbxref=NCBI_GP:EFB91197.1;Name=EFB91197.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574;gbkey=CDS;gene=miaB;locus_tag=HMPREF7215_0287;product=tRNA-i(6)A37 thiotransferase enzyme MiaB;protein_id=EFB91197.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 17374 17535 . - . ID=gene-HMPREF7215_0288;Name=HMPREF7215_0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0288 GCA_000177335.1|ADFP01000047.1 Genbank CDS 17374 17535 . - 0 ID=cds-EFB91198.1;Parent=gene-HMPREF7215_0288;Dbxref=NCBI_GP:EFB91198.1;Name=EFB91198.1;Note=identified by match to protein family HMM PF00301;gbkey=CDS;locus_tag=HMPREF7215_0288;product=rubredoxin;protein_id=EFB91198.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 17635 18750 . - . ID=gene-HMPREF7215_0289;Name=HMPREF7215_0289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0289 GCA_000177335.1|ADFP01000047.1 Genbank CDS 17635 18750 . - 0 ID=cds-EFB91199.1;Parent=gene-HMPREF7215_0289;Dbxref=NCBI_GP:EFB91199.1;Name=EFB91199.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;locus_tag=HMPREF7215_0289;product=Creatinase;protein_id=EFB91199.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 18766 19317 . - . ID=gene-HMPREF7215_0290;Name=HMPREF7215_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0290 GCA_000177335.1|ADFP01000047.1 Genbank CDS 18766 19317 . - 0 ID=cds-EFB91200.1;Parent=gene-HMPREF7215_0290;Dbxref=NCBI_GP:EFB91200.1;Name=EFB91200.1;Note=identified by match to protein family HMM PF02677;gbkey=CDS;locus_tag=HMPREF7215_0290;product=hypothetical protein;protein_id=EFB91200.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 19327 21264 . - . ID=gene-HMPREF7215_0291;Name=HMPREF7215_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0291 GCA_000177335.1|ADFP01000047.1 Genbank CDS 19327 21264 . - 0 ID=cds-EFB91201.1;Parent=gene-HMPREF7215_0291;Dbxref=NCBI_GP:EFB91201.1;Name=EFB91201.1;Note=identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF7215_0291;product=transketolase;protein_id=EFB91201.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 21341 21730 . - . ID=gene-HMPREF7215_0292;Name=HMPREF7215_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0292 GCA_000177335.1|ADFP01000047.1 Genbank CDS 21341 21730 . - 0 ID=cds-EFB91202.1;Parent=gene-HMPREF7215_0292;Dbxref=NCBI_GP:EFB91202.1;Name=EFB91202.1;Note=identified by match to protein family HMM PF01253;gbkey=CDS;locus_tag=HMPREF7215_0292;product=translation initiation factor SUI1;protein_id=EFB91202.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 21723 21914 . - . ID=gene-HMPREF7215_0293;Name=HMPREF7215_0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0293 GCA_000177335.1|ADFP01000047.1 Genbank CDS 21723 21914 . - 0 ID=cds-EFB91203.1;Parent=gene-HMPREF7215_0293;Dbxref=NCBI_GP:EFB91203.1;Name=EFB91203.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0293;product=hypothetical protein;protein_id=EFB91203.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 22028 22249 . - . ID=gene-HMPREF7215_0294;Name=HMPREF7215_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0294 GCA_000177335.1|ADFP01000047.1 Genbank CDS 22028 22249 . - 0 ID=cds-EFB91204.1;Parent=gene-HMPREF7215_0294;Dbxref=NCBI_GP:EFB91204.1;Name=EFB91204.1;gbkey=CDS;locus_tag=HMPREF7215_0294;product=hypothetical protein;protein_id=EFB91204.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 22421 23518 . + . ID=gene-HMPREF7215_0295;Name=HMPREF7215_0295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0295 GCA_000177335.1|ADFP01000047.1 Genbank CDS 22421 23518 . + 0 ID=cds-EFB91205.1;Parent=gene-HMPREF7215_0295;Dbxref=NCBI_GP:EFB91205.1;Name=EFB91205.1;gbkey=CDS;locus_tag=HMPREF7215_0295;product=hypothetical protein;protein_id=EFB91205.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 23532 23741 . + . ID=gene-HMPREF7215_0296;Name=HMPREF7215_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0296 GCA_000177335.1|ADFP01000047.1 Genbank CDS 23532 23741 . + 0 ID=cds-EFB91206.1;Parent=gene-HMPREF7215_0296;Dbxref=NCBI_GP:EFB91206.1;Name=EFB91206.1;gbkey=CDS;locus_tag=HMPREF7215_0296;product=hypothetical protein;protein_id=EFB91206.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 23839 24003 . + . ID=gene-HMPREF7215_0297;Name=HMPREF7215_0297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0297 GCA_000177335.1|ADFP01000047.1 Genbank CDS 23839 24003 . + 0 ID=cds-EFB91207.1;Parent=gene-HMPREF7215_0297;Dbxref=NCBI_GP:EFB91207.1;Name=EFB91207.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0297;product=hypothetical protein;protein_id=EFB91207.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 24078 25607 . + . ID=gene-HMPREF7215_0298;Name=grdC;gbkey=Gene;gene=grdC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0298 GCA_000177335.1|ADFP01000047.1 Genbank CDS 24078 25607 . + 0 ID=cds-EFB91208.1;Parent=gene-HMPREF7215_0298;Dbxref=NCBI_GP:EFB91208.1;Name=EFB91208.1;gbkey=CDS;gene=grdC;locus_tag=HMPREF7215_0298;product=glycine reductase complex%2C protein C;protein_id=EFB91208.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 25620 26774 . + . ID=gene-HMPREF7215_0299;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0299 GCA_000177335.1|ADFP01000047.1 Genbank CDS 25620 26774 . + 0 ID=cds-EFB91209.1;Parent=gene-HMPREF7215_0299;Dbxref=NCBI_GP:EFB91209.1;Name=EFB91209.1;Note=identified by match to protein family HMM PF02504;gbkey=CDS;gene=plsX;locus_tag=HMPREF7215_0299;product=fatty acid/phospholipid synthesis protein PlsX;protein_id=EFB91209.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 26902 27681 . - . ID=gene-HMPREF7215_0300;Name=HMPREF7215_0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0300 GCA_000177335.1|ADFP01000047.1 Genbank CDS 26902 27681 . - 0 ID=cds-EFB91210.1;Parent=gene-HMPREF7215_0300;Dbxref=NCBI_GP:EFB91210.1;Name=EFB91210.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0300;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91210.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 27678 28748 . - . ID=gene-HMPREF7215_0301;Name=HMPREF7215_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0301 GCA_000177335.1|ADFP01000047.1 Genbank CDS 27678 28748 . - 0 ID=cds-EFB91211.1;Parent=gene-HMPREF7215_0301;Dbxref=NCBI_GP:EFB91211.1;Name=EFB91211.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF7215_0301;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFB91211.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 28752 29867 . - . ID=gene-HMPREF7215_0302;Name=HMPREF7215_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0302 GCA_000177335.1|ADFP01000047.1 Genbank CDS 28752 29867 . - 0 ID=cds-EFB91212.1;Parent=gene-HMPREF7215_0302;Dbxref=NCBI_GP:EFB91212.1;Name=EFB91212.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_0302;product=periplasmic binding protein;protein_id=EFB91212.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 29864 30412 . - . ID=gene-HMPREF7215_0303;Name=HMPREF7215_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0303 GCA_000177335.1|ADFP01000047.1 Genbank CDS 29864 30412 . - 0 ID=cds-EFB91213.1;Parent=gene-HMPREF7215_0303;Dbxref=NCBI_GP:EFB91213.1;Name=EFB91213.1;Note=identified by match to protein family HMM PF02663;gbkey=CDS;locus_tag=HMPREF7215_0303;product=tungsten formylmethanofuran dehydrogenase%2C subunit E%2C FwdE;protein_id=EFB91213.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 30678 30983 . - . ID=gene-HMPREF7215_0304;Name=HMPREF7215_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0304 GCA_000177335.1|ADFP01000047.1 Genbank CDS 30678 30983 . - 0 ID=cds-EFB91214.1;Parent=gene-HMPREF7215_0304;Dbxref=NCBI_GP:EFB91214.1;Name=EFB91214.1;Note=identified by match to protein family HMM PF01371%3B match to protein family HMM TIGR02531;gbkey=CDS;locus_tag=HMPREF7215_0304;product=TrpR family protein YerC/YecD;protein_id=EFB91214.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 31215 31300 . + . ID=gene-HMPREF7215_0305;Name=HMPREF7215_0305;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0305 GCA_000177335.1|ADFP01000047.1 Genbank tRNA 31215 31300 . + . ID=rna-HMPREF7215_0305;Parent=gene-HMPREF7215_0305;gbkey=tRNA;locus_tag=HMPREF7215_0305;product=tRNA-Leu GCA_000177335.1|ADFP01000047.1 Genbank exon 31215 31300 . + . ID=exon-HMPREF7215_0305-1;Parent=rna-HMPREF7215_0305;gbkey=tRNA;locus_tag=HMPREF7215_0305;product=tRNA-Leu GCA_000177335.1|ADFP01000047.1 Genbank gene 31372 32691 . - . ID=gene-HMPREF7215_0306;Name=HMPREF7215_0306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0306 GCA_000177335.1|ADFP01000047.1 Genbank CDS 31372 32691 . - 0 ID=cds-EFB91215.1;Parent=gene-HMPREF7215_0306;Dbxref=NCBI_GP:EFB91215.1;Name=EFB91215.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;locus_tag=HMPREF7215_0306;product=recombination factor protein RarA;protein_id=EFB91215.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 32774 32887 . - . ID=gene-HMPREF7215_0307;Name=HMPREF7215_0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0307 GCA_000177335.1|ADFP01000047.1 Genbank CDS 32774 32887 . - 0 ID=cds-EFB91216.1;Parent=gene-HMPREF7215_0307;Dbxref=NCBI_GP:EFB91216.1;Name=EFB91216.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0307;product=hypothetical protein;protein_id=EFB91216.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 32848 33552 . - . ID=gene-HMPREF7215_0308;Name=HMPREF7215_0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0308 GCA_000177335.1|ADFP01000047.1 Genbank CDS 32848 33552 . - 0 ID=cds-EFB91217.1;Parent=gene-HMPREF7215_0308;Dbxref=NCBI_GP:EFB91217.1;Name=EFB91217.1;Note=identified by match to protein family HMM PF00730;gbkey=CDS;locus_tag=HMPREF7215_0308;product=base excision DNA repair protein%2C HhH-GPD family;protein_id=EFB91217.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 33549 35990 . - . ID=gene-HMPREF7215_0309;Name=HMPREF7215_0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0309 GCA_000177335.1|ADFP01000047.1 Genbank CDS 33549 35990 . - 0 ID=cds-EFB91218.1;Parent=gene-HMPREF7215_0309;Dbxref=NCBI_GP:EFB91218.1;Name=EFB91218.1;Note=identified by match to protein family HMM PF05362;gbkey=CDS;locus_tag=HMPREF7215_0309;product=putative ATP-dependent protease;protein_id=EFB91218.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 36005 37045 . - . ID=gene-HMPREF7215_0310;Name=HMPREF7215_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0310 GCA_000177335.1|ADFP01000047.1 Genbank CDS 36005 37045 . - 0 ID=cds-EFB91219.1;Parent=gene-HMPREF7215_0310;Dbxref=NCBI_GP:EFB91219.1;Name=EFB91219.1;Note=identified by match to protein family HMM PF03054;gbkey=CDS;locus_tag=HMPREF7215_0310;product=tRNA methyl transferase;protein_id=EFB91219.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 37124 39385 . + . ID=gene-HMPREF7215_0312;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0312 GCA_000177335.1|ADFP01000047.1 Genbank CDS 37124 39385 . + 0 ID=cds-EFB91220.1;Parent=gene-HMPREF7215_0312;Dbxref=NCBI_GP:EFB91220.1;Name=EFB91220.1;Note=identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143;gbkey=CDS;gene=hypF;locus_tag=HMPREF7215_0312;product=carbamoyltransferase HypF;protein_id=EFB91220.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 39382 40344 . - . ID=gene-HMPREF7215_0311;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0311 GCA_000177335.1|ADFP01000047.1 Genbank CDS 39382 40344 . - 0 ID=cds-EFB91221.1;Parent=gene-HMPREF7215_0311;Dbxref=NCBI_GP:EFB91221.1;Name=EFB91221.1;Note=identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482;gbkey=CDS;gene=pfkA;locus_tag=HMPREF7215_0311;product=6-phosphofructokinase;protein_id=EFB91221.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 40465 41199 . - . ID=gene-HMPREF7215_0313;Name=HMPREF7215_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0313 GCA_000177335.1|ADFP01000047.1 Genbank CDS 40465 41199 . - 0 ID=cds-EFB91222.1;Parent=gene-HMPREF7215_0313;Dbxref=NCBI_GP:EFB91222.1;Name=EFB91222.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0313;product=hypothetical protein;protein_id=EFB91222.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 41260 41847 . - . ID=gene-HMPREF7215_0314;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0314 GCA_000177335.1|ADFP01000047.1 Genbank CDS 41260 41847 . - 0 ID=cds-EFB91223.1;Parent=gene-HMPREF7215_0314;Dbxref=NCBI_GP:EFB91223.1;Name=EFB91223.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00441;gbkey=CDS;gene=gmhA;locus_tag=HMPREF7215_0314;product=phosphoheptose isomerase;protein_id=EFB91223.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 41858 42421 . - . ID=gene-HMPREF7215_0315;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0315 GCA_000177335.1|ADFP01000047.1 Genbank CDS 41858 42421 . - 0 ID=cds-EFB91224.1;Parent=gene-HMPREF7215_0315;Dbxref=NCBI_GP:EFB91224.1;Name=EFB91224.1;Note=identified by match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662;gbkey=CDS;gene=gmhB;locus_tag=HMPREF7215_0315;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=EFB91224.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 42396 43886 . - . ID=gene-HMPREF7215_0316;Name=rfaE;gbkey=Gene;gene=rfaE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0316 GCA_000177335.1|ADFP01000047.1 Genbank CDS 42396 43886 . - 0 ID=cds-EFB91225.1;Parent=gene-HMPREF7215_0316;Dbxref=NCBI_GP:EFB91225.1;Name=EFB91225.1;Note=identified by match to protein family HMM PF00294%3B match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR02199;gbkey=CDS;gene=rfaE;locus_tag=HMPREF7215_0316;product=bifunctional protein RfaE%2C domain II;protein_id=EFB91225.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 43894 44898 . - . ID=gene-HMPREF7215_0317;Name=HMPREF7215_0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0317 GCA_000177335.1|ADFP01000047.1 Genbank CDS 43894 44898 . - 0 ID=cds-EFB91226.1;Parent=gene-HMPREF7215_0317;Dbxref=NCBI_GP:EFB91226.1;Name=EFB91226.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF7215_0317;product=Heptosyltransferase;protein_id=EFB91226.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 44895 45917 . - . ID=gene-HMPREF7215_0318;Name=HMPREF7215_0318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0318 GCA_000177335.1|ADFP01000047.1 Genbank CDS 44895 45917 . - 0 ID=cds-EFB91227.1;Parent=gene-HMPREF7215_0318;Dbxref=NCBI_GP:EFB91227.1;Name=EFB91227.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF7215_0318;product=putative lipopolysaccharide heptosyltransferase II;protein_id=EFB91227.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 45907 46896 . - . ID=gene-HMPREF7215_0319;Name=HMPREF7215_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0319 GCA_000177335.1|ADFP01000047.1 Genbank CDS 45907 46896 . - 0 ID=cds-EFB91228.1;Parent=gene-HMPREF7215_0319;Dbxref=NCBI_GP:EFB91228.1;Name=EFB91228.1;gbkey=CDS;locus_tag=HMPREF7215_0319;product=hypothetical protein;protein_id=EFB91228.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 46943 48208 . - . ID=gene-HMPREF7215_0320;Name=HMPREF7215_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0320 GCA_000177335.1|ADFP01000047.1 Genbank CDS 46943 48208 . - 0 ID=cds-EFB91229.1;Parent=gene-HMPREF7215_0320;Dbxref=NCBI_GP:EFB91229.1;Name=EFB91229.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;locus_tag=HMPREF7215_0320;product=O-antigen polymerase;protein_id=EFB91229.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 48210 49307 . - . ID=gene-HMPREF7215_0321;Name=HMPREF7215_0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0321 GCA_000177335.1|ADFP01000047.1 Genbank CDS 48210 49307 . - 0 ID=cds-EFB91230.1;Parent=gene-HMPREF7215_0321;Dbxref=NCBI_GP:EFB91230.1;Name=EFB91230.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=HMPREF7215_0321;product=glycosyltransferase%2C group 1 family protein;protein_id=EFB91230.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 49403 50449 . - . ID=gene-HMPREF7215_0322;Name=HMPREF7215_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0322 GCA_000177335.1|ADFP01000047.1 Genbank CDS 49403 50449 . - 0 ID=cds-EFB91231.1;Parent=gene-HMPREF7215_0322;Dbxref=NCBI_GP:EFB91231.1;Name=EFB91231.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=HMPREF7215_0322;product=glycosyltransferase%2C group 1 family protein;protein_id=EFB91231.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 50437 51585 . - . ID=gene-HMPREF7215_0323;Name=HMPREF7215_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0323 GCA_000177335.1|ADFP01000047.1 Genbank CDS 50437 51585 . - 0 ID=cds-EFB91232.1;Parent=gene-HMPREF7215_0323;Dbxref=NCBI_GP:EFB91232.1;Name=EFB91232.1;gbkey=CDS;locus_tag=HMPREF7215_0323;product=hypothetical protein;protein_id=EFB91232.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 51588 52748 . - . ID=gene-HMPREF7215_0324;Name=HMPREF7215_0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0324 GCA_000177335.1|ADFP01000047.1 Genbank CDS 51588 52748 . - 0 ID=cds-EFB91233.1;Parent=gene-HMPREF7215_0324;Dbxref=NCBI_GP:EFB91233.1;Name=EFB91233.1;Note=identified by match to protein family HMM PF01969;gbkey=CDS;locus_tag=HMPREF7215_0324;product=putative TIGR00299 family protein;protein_id=EFB91233.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 52843 53571 . - . ID=gene-HMPREF7215_0325;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0325 GCA_000177335.1|ADFP01000047.1 Genbank CDS 52843 53571 . - 0 ID=cds-EFB91234.1;Parent=gene-HMPREF7215_0325;Dbxref=NCBI_GP:EFB91234.1;Name=EFB91234.1;Note=identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466;gbkey=CDS;gene=kdsB;locus_tag=HMPREF7215_0325;product=3-deoxy-D-manno-octulosonate cytidylyltransferase;protein_id=EFB91234.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 53573 54772 . - . ID=gene-HMPREF7215_0326;Name=HMPREF7215_0326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0326 GCA_000177335.1|ADFP01000047.1 Genbank CDS 53573 54772 . - 0 ID=cds-EFB91235.1;Parent=gene-HMPREF7215_0326;Dbxref=NCBI_GP:EFB91235.1;Name=EFB91235.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0326;product=hypothetical protein;protein_id=EFB91235.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 54763 56049 . - . ID=gene-HMPREF7215_0327;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0327 GCA_000177335.1|ADFP01000047.1 Genbank CDS 54763 56049 . - 0 ID=cds-EFB91236.1;Parent=gene-HMPREF7215_0327;Dbxref=NCBI_GP:EFB91236.1;Name=EFB91236.1;Note=identified by match to protein family HMM PF04413;gbkey=CDS;gene=waaA;locus_tag=HMPREF7215_0327;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=EFB91236.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 56052 57074 . - . ID=gene-HMPREF7215_0328;Name=HMPREF7215_0328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0328 GCA_000177335.1|ADFP01000047.1 Genbank CDS 56052 57074 . - 0 ID=cds-EFB91237.1;Parent=gene-HMPREF7215_0328;Dbxref=NCBI_GP:EFB91237.1;Name=EFB91237.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR00393;gbkey=CDS;locus_tag=HMPREF7215_0328;product=sugar isomerase%2C KpsF/GutQ family;protein_id=EFB91237.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 57071 57922 . - . ID=gene-HMPREF7215_0329;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0329 GCA_000177335.1|ADFP01000047.1 Genbank CDS 57071 57922 . - 0 ID=cds-EFB91238.1;Parent=gene-HMPREF7215_0329;Dbxref=NCBI_GP:EFB91238.1;Name=EFB91238.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01362;gbkey=CDS;gene=kdsA;locus_tag=HMPREF7215_0329;product=3-deoxy-8-phosphooctulonate synthase;protein_id=EFB91238.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 57953 60190 . - . ID=gene-HMPREF7215_0330;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=HMPREF7215_0330 GCA_000177335.1|ADFP01000047.1 Genbank CDS 57953 60190 . - 0 ID=cds-EFB91239.1;Parent=gene-HMPREF7215_0330;Dbxref=NCBI_GP:EFB91239.1;Name=EFB91239.1;Note=identified by match to protein family HMM PF02606%3B match to protein family HMM TIGR00682;gbkey=CDS;gene=lpxK;locus_tag=HMPREF7215_0330;product=tetraacyldisaccharide 4'-kinase;protein_id=EFB91239.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 60187 62112 . - . ID=gene-HMPREF7215_0331;Name=HMPREF7215_0331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0331 GCA_000177335.1|ADFP01000047.1 Genbank CDS 60187 62112 . - 0 ID=cds-EFB91240.1;Parent=gene-HMPREF7215_0331;Dbxref=NCBI_GP:EFB91240.1;Name=EFB91240.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF7215_0331;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91240.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 61913 63022 . - . ID=gene-HMPREF7215_0332;Name=HMPREF7215_0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0332 GCA_000177335.1|ADFP01000047.1 Genbank CDS 61913 63022 . - 0 ID=cds-EFB91241.1;Parent=gene-HMPREF7215_0332;Dbxref=NCBI_GP:EFB91241.1;Name=EFB91241.1;gbkey=CDS;locus_tag=HMPREF7215_0332;product=hypothetical protein;protein_id=EFB91241.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 63019 64125 . - . ID=gene-HMPREF7215_0333;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0333 GCA_000177335.1|ADFP01000047.1 Genbank CDS 63019 64125 . - 0 ID=cds-EFB91242.1;Parent=gene-HMPREF7215_0333;Dbxref=NCBI_GP:EFB91242.1;Name=EFB91242.1;Note=identified by match to protein family HMM PF02684%3B match to protein family HMM TIGR00215;gbkey=CDS;gene=lpxB;locus_tag=HMPREF7215_0333;product=lipid-A-disaccharide synthase;protein_id=EFB91242.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 64110 64934 . - . ID=gene-HMPREF7215_0334;Name=HMPREF7215_0334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0334 GCA_000177335.1|ADFP01000047.1 Genbank CDS 64110 64934 . - 0 ID=cds-EFB91243.1;Parent=gene-HMPREF7215_0334;Dbxref=NCBI_GP:EFB91243.1;Name=EFB91243.1;Note=identified by match to protein family HMM PF06230;gbkey=CDS;locus_tag=HMPREF7215_0334;product=hypothetical protein;protein_id=EFB91243.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 64931 66037 . - . ID=gene-HMPREF7215_0335;Name=HMPREF7215_0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0335 GCA_000177335.1|ADFP01000047.1 Genbank CDS 64931 66037 . - 0 ID=cds-EFB91244.1;Parent=gene-HMPREF7215_0335;Dbxref=NCBI_GP:EFB91244.1;Name=EFB91244.1;Note=identified by match to protein family HMM PF03739;gbkey=CDS;locus_tag=HMPREF7215_0335;product=permease%2C YjgP/YjgQ family;protein_id=EFB91244.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 66041 66514 . - . ID=gene-HMPREF7215_0336;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0336 GCA_000177335.1|ADFP01000047.1 Genbank CDS 66041 66514 . - 0 ID=cds-EFB91245.1;Parent=gene-HMPREF7215_0336;Dbxref=NCBI_GP:EFB91245.1;Name=EFB91245.1;Note=identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670;gbkey=CDS;gene=kdsC;locus_tag=HMPREF7215_0336;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family;protein_id=EFB91245.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 66514 67332 . - . ID=gene-HMPREF7215_0337;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0337 GCA_000177335.1|ADFP01000047.1 Genbank CDS 66514 67332 . - 0 ID=cds-EFB91246.1;Parent=gene-HMPREF7215_0337;Dbxref=NCBI_GP:EFB91246.1;Name=EFB91246.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01852;gbkey=CDS;gene=lpxA;locus_tag=HMPREF7215_0337;product=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase;protein_id=EFB91246.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 67334 67777 . - . ID=gene-HMPREF7215_0338;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0338 GCA_000177335.1|ADFP01000047.1 Genbank CDS 67334 67777 . - 0 ID=cds-EFB91247.1;Parent=gene-HMPREF7215_0338;Dbxref=NCBI_GP:EFB91247.1;Name=EFB91247.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM PF07977%3B match to protein family HMM TIGR01750;gbkey=CDS;gene=fabZ;locus_tag=HMPREF7215_0338;product=beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;protein_id=EFB91247.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 67874 68704 . - . ID=gene-HMPREF7215_0339;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0339 GCA_000177335.1|ADFP01000047.1 Genbank CDS 67874 68704 . - 0 ID=cds-EFB91248.1;Parent=gene-HMPREF7215_0339;Dbxref=NCBI_GP:EFB91248.1;Name=EFB91248.1;Note=identified by match to protein family HMM PF03331%3B match to protein family HMM TIGR00325;gbkey=CDS;gene=lpxC;locus_tag=HMPREF7215_0339;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=EFB91248.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 68673 69716 . - . ID=gene-HMPREF7215_0340;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0340 GCA_000177335.1|ADFP01000047.1 Genbank CDS 68673 69716 . - 0 ID=cds-EFB91249.1;Parent=gene-HMPREF7215_0340;Dbxref=NCBI_GP:EFB91249.1;Name=EFB91249.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01853;gbkey=CDS;gene=lpxD;locus_tag=HMPREF7215_0340;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=EFB91249.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 69742 71019 . - . ID=gene-HMPREF7215_0341;Name=HMPREF7215_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0341 GCA_000177335.1|ADFP01000047.1 Genbank CDS 69742 71019 . - 0 ID=cds-EFB91250.1;Parent=gene-HMPREF7215_0341;Dbxref=NCBI_GP:EFB91250.1;Name=EFB91250.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0341;product=hypothetical protein;protein_id=EFB91250.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 71075 72841 . - . ID=gene-HMPREF7215_0342;Name=HMPREF7215_0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0342 GCA_000177335.1|ADFP01000047.1 Genbank CDS 71075 72841 . - 0 ID=cds-EFB91251.1;Parent=gene-HMPREF7215_0342;Dbxref=NCBI_GP:EFB91251.1;Name=EFB91251.1;Note=identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244;gbkey=CDS;locus_tag=HMPREF7215_0342;product=outer membrane protein%2C OMP85 family;protein_id=EFB91251.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 72867 73010 . - . ID=gene-HMPREF7215_0343;Name=HMPREF7215_0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0343 GCA_000177335.1|ADFP01000047.1 Genbank CDS 72867 73010 . - 0 ID=cds-EFB91252.1;Parent=gene-HMPREF7215_0343;Dbxref=NCBI_GP:EFB91252.1;Name=EFB91252.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0343;product=hypothetical protein;protein_id=EFB91252.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 73513 74103 . - . ID=gene-HMPREF7215_0344;Name=HMPREF7215_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0344 GCA_000177335.1|ADFP01000047.1 Genbank CDS 73513 74103 . - 0 ID=cds-EFB91253.1;Parent=gene-HMPREF7215_0344;Dbxref=NCBI_GP:EFB91253.1;Name=EFB91253.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02937;gbkey=CDS;locus_tag=HMPREF7215_0344;product=Sigma-70 region 2;protein_id=EFB91253.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 74236 74889 . - . ID=gene-HMPREF7215_0345;Name=HMPREF7215_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0345 GCA_000177335.1|ADFP01000047.1 Genbank CDS 74236 74889 . - 0 ID=cds-EFB91254.1;Parent=gene-HMPREF7215_0345;Dbxref=NCBI_GP:EFB91254.1;Name=EFB91254.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF7215_0345;product=phosphoglycerate mutase family protein;protein_id=EFB91254.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 74970 75083 . - . ID=gene-HMPREF7215_0346;Name=HMPREF7215_0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0346 GCA_000177335.1|ADFP01000047.1 Genbank CDS 74970 75083 . - 0 ID=cds-EFB91255.1;Parent=gene-HMPREF7215_0346;Dbxref=NCBI_GP:EFB91255.1;Name=EFB91255.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0346;product=hypothetical protein;protein_id=EFB91255.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 75261 75812 . - . ID=gene-HMPREF7215_0347;Name=HMPREF7215_0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0347 GCA_000177335.1|ADFP01000047.1 Genbank CDS 75261 75812 . - 0 ID=cds-EFB91256.1;Parent=gene-HMPREF7215_0347;Dbxref=NCBI_GP:EFB91256.1;Name=EFB91256.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF7215_0347;product=2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family;protein_id=EFB91256.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 75824 76567 . - . ID=gene-HMPREF7215_0348;Name=HMPREF7215_0348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0348 GCA_000177335.1|ADFP01000047.1 Genbank CDS 75824 76567 . - 0 ID=cds-EFB91257.1;Parent=gene-HMPREF7215_0348;Dbxref=NCBI_GP:EFB91257.1;Name=EFB91257.1;Note=identified by match to protein family HMM PF02775;gbkey=CDS;locus_tag=HMPREF7215_0348;product=thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein;protein_id=EFB91257.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 76580 77632 . - . ID=gene-HMPREF7215_0349;Name=HMPREF7215_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0349 GCA_000177335.1|ADFP01000047.1 Genbank CDS 76580 77632 . - 0 ID=cds-EFB91258.1;Parent=gene-HMPREF7215_0349;Dbxref=NCBI_GP:EFB91258.1;Name=EFB91258.1;Note=identified by match to protein family HMM PF01855;gbkey=CDS;locus_tag=HMPREF7215_0349;product=3-methyl-2-oxobutanoate dehydrogenase (ferredoxin);protein_id=EFB91258.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 77776 78135 . + . ID=gene-HMPREF7215_0351;Name=HMPREF7215_0351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0351 GCA_000177335.1|ADFP01000047.1 Genbank CDS 77776 78135 . + 0 ID=cds-EFB91259.1;Parent=gene-HMPREF7215_0351;Dbxref=NCBI_GP:EFB91259.1;Name=EFB91259.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0351;product=hypothetical protein;protein_id=EFB91259.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 78103 78936 . - . ID=gene-HMPREF7215_0350;Name=HMPREF7215_0350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0350 GCA_000177335.1|ADFP01000047.1 Genbank CDS 78103 78936 . - 0 ID=cds-EFB91260.1;Parent=gene-HMPREF7215_0350;Dbxref=NCBI_GP:EFB91260.1;Name=EFB91260.1;gbkey=CDS;locus_tag=HMPREF7215_0350;product=hypothetical protein;protein_id=EFB91260.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 79378 79572 . - . ID=gene-HMPREF7215_0352;Name=HMPREF7215_0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0352 GCA_000177335.1|ADFP01000047.1 Genbank CDS 79378 79572 . - 0 ID=cds-EFB91261.1;Parent=gene-HMPREF7215_0352;Dbxref=NCBI_GP:EFB91261.1;Name=EFB91261.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0352;product=hypothetical protein;protein_id=EFB91261.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 79733 83290 . - . ID=gene-HMPREF7215_0353;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0353 GCA_000177335.1|ADFP01000047.1 Genbank CDS 79733 83290 . - 0 ID=cds-EFB91262.1;Parent=gene-HMPREF7215_0353;Dbxref=NCBI_GP:EFB91262.1;Name=EFB91262.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF7215_0353;product=pyruvate synthase;protein_id=EFB91262.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 83436 83660 . + . ID=gene-HMPREF7215_0354;Name=HMPREF7215_0354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0354 GCA_000177335.1|ADFP01000047.1 Genbank CDS 83436 83660 . + 0 ID=cds-EFB91263.1;Parent=gene-HMPREF7215_0354;Dbxref=NCBI_GP:EFB91263.1;Name=EFB91263.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0354;product=hypothetical protein;protein_id=EFB91263.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 83750 85360 . + . ID=gene-HMPREF7215_0355;Name=HMPREF7215_0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0355 GCA_000177335.1|ADFP01000047.1 Genbank CDS 83750 85360 . + 0 ID=cds-EFB91264.1;Parent=gene-HMPREF7215_0355;Dbxref=NCBI_GP:EFB91264.1;Name=EFB91264.1;Note=identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=HMPREF7215_0355;product=transposase%2C IS4 family;protein_id=EFB91264.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 85372 85497 . - . ID=gene-HMPREF7215_0356;Name=HMPREF7215_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0356 GCA_000177335.1|ADFP01000047.1 Genbank CDS 85372 85497 . - 0 ID=cds-EFB91265.1;Parent=gene-HMPREF7215_0356;Dbxref=NCBI_GP:EFB91265.1;Name=EFB91265.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0356;product=hypothetical protein;protein_id=EFB91265.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 85707 85862 . + . ID=gene-HMPREF7215_0357;Name=HMPREF7215_0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0357 GCA_000177335.1|ADFP01000047.1 Genbank CDS 85707 85862 . + 0 ID=cds-EFB91266.1;Parent=gene-HMPREF7215_0357;Dbxref=NCBI_GP:EFB91266.1;Name=EFB91266.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0357;product=hypothetical protein;protein_id=EFB91266.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 86146 87186 . - . ID=gene-HMPREF7215_0358;Name=HMPREF7215_0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0358 GCA_000177335.1|ADFP01000047.1 Genbank CDS 86146 87186 . - 0 ID=cds-EFB91267.1;Parent=gene-HMPREF7215_0358;Dbxref=NCBI_GP:EFB91267.1;Name=EFB91267.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_0358;product=transcriptional regulator%2C AraC family;protein_id=EFB91267.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 87176 87331 . + . ID=gene-HMPREF7215_0359;Name=HMPREF7215_0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0359 GCA_000177335.1|ADFP01000047.1 Genbank CDS 87176 87331 . + 0 ID=cds-EFB91268.1;Parent=gene-HMPREF7215_0359;Dbxref=NCBI_GP:EFB91268.1;Name=EFB91268.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0359;product=hypothetical protein;protein_id=EFB91268.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 87485 88357 . + . ID=gene-HMPREF7215_0360;Name=HMPREF7215_0360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0360 GCA_000177335.1|ADFP01000047.1 Genbank CDS 87485 88357 . + 0 ID=cds-EFB91269.1;Parent=gene-HMPREF7215_0360;Dbxref=NCBI_GP:EFB91269.1;Name=EFB91269.1;gbkey=CDS;locus_tag=HMPREF7215_0360;product=putative carboxyvinyl-carboxyphosphonate phosphorylmutase;protein_id=EFB91269.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 88587 89051 . + . ID=gene-HMPREF7215_0361;Name=HMPREF7215_0361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0361 GCA_000177335.1|ADFP01000047.1 Genbank CDS 88587 89051 . + 0 ID=cds-EFB91270.1;Parent=gene-HMPREF7215_0361;Dbxref=NCBI_GP:EFB91270.1;Name=EFB91270.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0361;product=putative transposase%2C IS4 family;protein_id=EFB91270.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 89103 90299 . + . ID=gene-HMPREF7215_0362;Name=HMPREF7215_0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0362 GCA_000177335.1|ADFP01000047.1 Genbank CDS 89103 90299 . + 0 ID=cds-EFB91271.1;Parent=gene-HMPREF7215_0362;Dbxref=NCBI_GP:EFB91271.1;Name=EFB91271.1;Note=identified by match to protein family HMM PF02515;gbkey=CDS;locus_tag=HMPREF7215_0362;product=CoA-transferase family III protein;protein_id=EFB91271.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 90353 91288 . + . ID=gene-HMPREF7215_0363;Name=HMPREF7215_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0363 GCA_000177335.1|ADFP01000047.1 Genbank CDS 90353 91288 . + 0 ID=cds-EFB91272.1;Parent=gene-HMPREF7215_0363;Dbxref=NCBI_GP:EFB91272.1;Name=EFB91272.1;Note=identified by match to protein family HMM PF00682;gbkey=CDS;locus_tag=HMPREF7215_0363;product=HMGL-like protein;protein_id=EFB91272.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 91383 92363 . + . ID=gene-HMPREF7215_0364;Name=HMPREF7215_0364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0364 GCA_000177335.1|ADFP01000047.1 Genbank CDS 91383 92363 . + 0 ID=cds-EFB91273.1;Parent=gene-HMPREF7215_0364;Dbxref=NCBI_GP:EFB91273.1;Name=EFB91273.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;locus_tag=HMPREF7215_0364;product=TRAP transporter solute receptor%2C DctP family;protein_id=EFB91273.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 92454 92963 . + . ID=gene-HMPREF7215_0365;Name=HMPREF7215_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0365 GCA_000177335.1|ADFP01000047.1 Genbank CDS 92454 92963 . + 0 ID=cds-EFB91274.1;Parent=gene-HMPREF7215_0365;Dbxref=NCBI_GP:EFB91274.1;Name=EFB91274.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04290;gbkey=CDS;locus_tag=HMPREF7215_0365;product=TRAP transporter%2C DctQ-like membrane protein;protein_id=EFB91274.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 92978 94255 . + . ID=gene-HMPREF7215_0366;Name=HMPREF7215_0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0366 GCA_000177335.1|ADFP01000047.1 Genbank CDS 92978 94255 . + 0 ID=cds-EFB91275.1;Parent=gene-HMPREF7215_0366;Dbxref=NCBI_GP:EFB91275.1;Name=EFB91275.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;locus_tag=HMPREF7215_0366;product=TRAP transporter%2C DctM subunit;protein_id=EFB91275.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 94364 94606 . + . ID=gene-HMPREF7215_0367;Name=HMPREF7215_0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0367 GCA_000177335.1|ADFP01000047.1 Genbank CDS 94364 94606 . + 0 ID=cds-EFB91276.1;Parent=gene-HMPREF7215_0367;Dbxref=NCBI_GP:EFB91276.1;Name=EFB91276.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0367;product=hypothetical protein;protein_id=EFB91276.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 94707 94976 . - . ID=gene-HMPREF7215_0368;Name=HMPREF7215_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0368 GCA_000177335.1|ADFP01000047.1 Genbank CDS 94707 94976 . - 0 ID=cds-EFB91277.1;Parent=gene-HMPREF7215_0368;Dbxref=NCBI_GP:EFB91277.1;Name=EFB91277.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_0368;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91277.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 94973 95194 . - . ID=gene-HMPREF7215_0369;Name=HMPREF7215_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0369 GCA_000177335.1|ADFP01000047.1 Genbank CDS 94973 95194 . - 0 ID=cds-EFB91278.1;Parent=gene-HMPREF7215_0369;Dbxref=NCBI_GP:EFB91278.1;Name=EFB91278.1;gbkey=CDS;locus_tag=HMPREF7215_0369;product=hypothetical protein;protein_id=EFB91278.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 95259 95435 . - . ID=gene-HMPREF7215_0370;Name=HMPREF7215_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0370 GCA_000177335.1|ADFP01000047.1 Genbank CDS 95259 95435 . - 0 ID=cds-EFB91279.1;Parent=gene-HMPREF7215_0370;Dbxref=NCBI_GP:EFB91279.1;Name=EFB91279.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0370;product=hypothetical protein;protein_id=EFB91279.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 95532 95607 . - . ID=gene-HMPREF7215_0371;Name=HMPREF7215_0371;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0371 GCA_000177335.1|ADFP01000047.1 Genbank tRNA 95532 95607 . - . ID=rna-HMPREF7215_0371;Parent=gene-HMPREF7215_0371;gbkey=tRNA;locus_tag=HMPREF7215_0371;product=tRNA-Thr GCA_000177335.1|ADFP01000047.1 Genbank exon 95532 95607 . - . ID=exon-HMPREF7215_0371-1;Parent=rna-HMPREF7215_0371;gbkey=tRNA;locus_tag=HMPREF7215_0371;product=tRNA-Thr GCA_000177335.1|ADFP01000047.1 Genbank gene 95615 95692 . - . ID=gene-HMPREF7215_0372;Name=HMPREF7215_0372;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0372 GCA_000177335.1|ADFP01000047.1 Genbank tRNA 95615 95692 . - . ID=rna-HMPREF7215_0372;Parent=gene-HMPREF7215_0372;gbkey=tRNA;locus_tag=HMPREF7215_0372;product=tRNA-Glu GCA_000177335.1|ADFP01000047.1 Genbank exon 95615 95692 . - . ID=exon-HMPREF7215_0372-1;Parent=rna-HMPREF7215_0372;gbkey=tRNA;locus_tag=HMPREF7215_0372;product=tRNA-Glu GCA_000177335.1|ADFP01000047.1 Genbank gene 95699 95774 . - . ID=gene-HMPREF7215_0373;Name=HMPREF7215_0373;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0373 GCA_000177335.1|ADFP01000047.1 Genbank tRNA 95699 95774 . - . ID=rna-HMPREF7215_0373;Parent=gene-HMPREF7215_0373;gbkey=tRNA;locus_tag=HMPREF7215_0373;product=tRNA-Lys GCA_000177335.1|ADFP01000047.1 Genbank exon 95699 95774 . - . ID=exon-HMPREF7215_0373-1;Parent=rna-HMPREF7215_0373;gbkey=tRNA;locus_tag=HMPREF7215_0373;product=tRNA-Lys GCA_000177335.1|ADFP01000047.1 Genbank gene 95838 96422 . - . ID=gene-HMPREF7215_0374;Name=HMPREF7215_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0374 GCA_000177335.1|ADFP01000047.1 Genbank CDS 95838 96422 . - 0 ID=cds-EFB91280.1;Parent=gene-HMPREF7215_0374;Dbxref=NCBI_GP:EFB91280.1;Name=EFB91280.1;gbkey=CDS;locus_tag=HMPREF7215_0374;product=hypothetical protein;protein_id=EFB91280.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 96423 96854 . - . ID=gene-HMPREF7215_0375;Name=HMPREF7215_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0375 GCA_000177335.1|ADFP01000047.1 Genbank CDS 96423 96854 . - 0 ID=cds-EFB91281.1;Parent=gene-HMPREF7215_0375;Dbxref=NCBI_GP:EFB91281.1;Name=EFB91281.1;Note=identified by match to protein family HMM PF00575;gbkey=CDS;locus_tag=HMPREF7215_0375;product=S1 RNA binding domain protein;protein_id=EFB91281.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 96894 97199 . - . ID=gene-HMPREF7215_0376;Name=HMPREF7215_0376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0376 GCA_000177335.1|ADFP01000047.1 Genbank CDS 96894 97199 . - 0 ID=cds-EFB91282.1;Parent=gene-HMPREF7215_0376;Dbxref=NCBI_GP:EFB91282.1;Name=EFB91282.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0376;product=hypothetical protein;protein_id=EFB91282.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 97263 97766 . - . ID=gene-HMPREF7215_0377;Name=HMPREF7215_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0377 GCA_000177335.1|ADFP01000047.1 Genbank CDS 97263 97766 . - 0 ID=cds-EFB91283.1;Parent=gene-HMPREF7215_0377;Dbxref=NCBI_GP:EFB91283.1;Name=EFB91283.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;locus_tag=HMPREF7215_0377;product=transglycosylase SLT domain protein;protein_id=EFB91283.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 98005 98895 . - . ID=gene-HMPREF7215_0378;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0378 GCA_000177335.1|ADFP01000047.1 Genbank CDS 98005 98895 . - 0 ID=cds-EFB91284.1;Parent=gene-HMPREF7215_0378;Dbxref=NCBI_GP:EFB91284.1;Name=EFB91284.1;Note=identified by match to protein family HMM PF06018%3B match to protein family HMM PF08222;gbkey=CDS;gene=codY;locus_tag=HMPREF7215_0378;product=CodY helix-turn-helix domain protein;protein_id=EFB91284.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 98928 100343 . - . ID=gene-HMPREF7215_0379;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HMPREF7215_0379 GCA_000177335.1|ADFP01000047.1 Genbank CDS 98928 100343 . - 0 ID=cds-EFB91285.1;Parent=gene-HMPREF7215_0379;Dbxref=NCBI_GP:EFB91285.1;Name=EFB91285.1;Note=identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390;gbkey=CDS;gene=hslU;locus_tag=HMPREF7215_0379;product=ATP-dependent protease HslVU%2C ATPase subunit;protein_id=EFB91285.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 100343 100885 . - . ID=gene-HMPREF7215_0380;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=HMPREF7215_0380 GCA_000177335.1|ADFP01000047.1 Genbank CDS 100343 100885 . - 0 ID=cds-EFB91286.1;Parent=gene-HMPREF7215_0380;Dbxref=NCBI_GP:EFB91286.1;Name=EFB91286.1;Note=identified by match to protein family HMM PF00227%3B match to protein family HMM TIGR03692;gbkey=CDS;gene=hslV;locus_tag=HMPREF7215_0380;product=ATP-dependent protease HslVU%2C peptidase subunit;protein_id=EFB91286.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 100888 101760 . - . ID=gene-HMPREF7215_0381;Name=HMPREF7215_0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0381 GCA_000177335.1|ADFP01000047.1 Genbank CDS 100888 101760 . - 0 ID=cds-EFB91287.1;Parent=gene-HMPREF7215_0381;Dbxref=NCBI_GP:EFB91287.1;Name=EFB91287.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;locus_tag=HMPREF7215_0381;product=phage integrase SAM-like domain protein;protein_id=EFB91287.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 101956 103293 . - . ID=gene-HMPREF7215_0382;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=HMPREF7215_0382 GCA_000177335.1|ADFP01000047.1 Genbank CDS 101956 103293 . - 0 ID=cds-EFB91288.1;Parent=gene-HMPREF7215_0382;Dbxref=NCBI_GP:EFB91288.1;Name=EFB91288.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137;gbkey=CDS;gene=trmFO;locus_tag=HMPREF7215_0382;product=tRNA:m(5)U-54 methyltransferase;protein_id=EFB91288.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 103294 105597 . - . ID=gene-HMPREF7215_0383;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0383 GCA_000177335.1|ADFP01000047.1 Genbank CDS 103294 105597 . - 0 ID=cds-EFB91289.1;Parent=gene-HMPREF7215_0383;Dbxref=NCBI_GP:EFB91289.1;Name=EFB91289.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051;gbkey=CDS;gene=topA;locus_tag=HMPREF7215_0383;product=DNA topoisomerase I;protein_id=EFB91289.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 105622 105849 . - . ID=gene-HMPREF7215_0384;Name=HMPREF7215_0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0384 GCA_000177335.1|ADFP01000047.1 Genbank CDS 105622 105849 . - 0 ID=cds-EFB91290.1;Parent=gene-HMPREF7215_0384;Dbxref=NCBI_GP:EFB91290.1;Name=EFB91290.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0384;product=hypothetical protein;protein_id=EFB91290.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 106054 108432 . - . ID=gene-HMPREF7215_0385;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0385 GCA_000177335.1|ADFP01000047.1 Genbank CDS 106054 108432 . - 0 ID=cds-EFB91291.1;Parent=gene-HMPREF7215_0385;Dbxref=NCBI_GP:EFB91291.1;Name=EFB91291.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01418;gbkey=CDS;gene=ppsA;locus_tag=HMPREF7215_0385;product=pyruvate%2C water dikinase;protein_id=EFB91291.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 108508 109389 . - . ID=gene-HMPREF7215_0386;Name=HMPREF7215_0386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0386 GCA_000177335.1|ADFP01000047.1 Genbank CDS 108508 109389 . - 0 ID=cds-EFB91292.1;Parent=gene-HMPREF7215_0386;Dbxref=NCBI_GP:EFB91292.1;Name=EFB91292.1;Note=identified by match to protein family HMM PF03618%3B 2.7.11.-%3B 2.7.4.-;gbkey=CDS;locus_tag=HMPREF7215_0386;product=hypothetical protein;protein_id=EFB91292.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 109408 110475 . - . ID=gene-HMPREF7215_0387;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0387 GCA_000177335.1|ADFP01000047.1 Genbank CDS 109408 110475 . - 0 ID=cds-EFB91293.1;Parent=gene-HMPREF7215_0387;Dbxref=NCBI_GP:EFB91293.1;Name=EFB91293.1;Note=identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;gene=dprA;locus_tag=HMPREF7215_0387;product=DNA protecting protein DprA;protein_id=EFB91293.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 110472 111977 . - . ID=gene-HMPREF7215_0388;Name=HMPREF7215_0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0388 GCA_000177335.1|ADFP01000047.1 Genbank CDS 110472 111977 . - 0 ID=cds-EFB91294.1;Parent=gene-HMPREF7215_0388;Dbxref=NCBI_GP:EFB91294.1;Name=EFB91294.1;Note=identified by match to protein family HMM PF01078%3B match to protein family HMM TIGR00368;gbkey=CDS;locus_tag=HMPREF7215_0388;product=Mg chelatase-like protein;protein_id=EFB91294.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 111967 112461 . - . ID=gene-HMPREF7215_0389;Name=HMPREF7215_0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0389 GCA_000177335.1|ADFP01000047.1 Genbank CDS 111967 112461 . - 0 ID=cds-EFB91295.1;Parent=gene-HMPREF7215_0389;Dbxref=NCBI_GP:EFB91295.1;Name=EFB91295.1;Note=identified by match to protein family HMM PF02021;gbkey=CDS;locus_tag=HMPREF7215_0389;product=putative TIGR00252 family protein;protein_id=EFB91295.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 112502 113062 . - . ID=gene-HMPREF7215_0390;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0390 GCA_000177335.1|ADFP01000047.1 Genbank CDS 112502 113062 . - 0 ID=cds-EFB91296.1;Parent=gene-HMPREF7215_0390;Dbxref=NCBI_GP:EFB91296.1;Name=EFB91296.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=HMPREF7215_0390;product=ribonuclease HII;protein_id=EFB91296.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 113059 113925 . - . ID=gene-HMPREF7215_0391;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0391 GCA_000177335.1|ADFP01000047.1 Genbank CDS 113059 113925 . - 0 ID=cds-EFB91297.1;Parent=gene-HMPREF7215_0391;Dbxref=NCBI_GP:EFB91297.1;Name=EFB91297.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596;gbkey=CDS;gene=ylqF;locus_tag=HMPREF7215_0391;product=ribosome biogenesis GTP-binding protein YlqF;protein_id=EFB91297.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 113925 114497 . - . ID=gene-HMPREF7215_0392;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0392 GCA_000177335.1|ADFP01000047.1 Genbank CDS 113925 114497 . - 0 ID=cds-EFB91298.1;Parent=gene-HMPREF7215_0392;Dbxref=NCBI_GP:EFB91298.1;Name=EFB91298.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB;locus_tag=HMPREF7215_0392;product=signal peptidase I;protein_id=EFB91298.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 115033 116898 . - . ID=gene-HMPREF7215_0393;Name=HMPREF7215_0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0393 GCA_000177335.1|ADFP01000047.1 Genbank CDS 115033 116898 . - 0 ID=cds-EFB91299.1;Parent=gene-HMPREF7215_0393;Dbxref=NCBI_GP:EFB91299.1;Name=EFB91299.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF7215_0393;product=polysaccharide biosynthesis protein;protein_id=EFB91299.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 116969 117403 . - . ID=gene-HMPREF7215_0394;Name=HMPREF7215_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0394 GCA_000177335.1|ADFP01000047.1 Genbank CDS 116969 117403 . - 0 ID=cds-EFB91300.1;Parent=gene-HMPREF7215_0394;Dbxref=NCBI_GP:EFB91300.1;Name=EFB91300.1;gbkey=CDS;locus_tag=HMPREF7215_0394;product=hypothetical protein;protein_id=EFB91300.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 117439 118530 . - . ID=gene-HMPREF7215_0395;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0395 GCA_000177335.1|ADFP01000047.1 Genbank CDS 117439 118530 . - 0 ID=cds-EFB91301.1;Parent=gene-HMPREF7215_0395;Dbxref=NCBI_GP:EFB91301.1;Name=EFB91301.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;gene=ychF;locus_tag=HMPREF7215_0395;product=GTP-binding protein YchF;protein_id=EFB91301.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 118527 118643 . - . ID=gene-HMPREF7215_0396;Name=HMPREF7215_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0396 GCA_000177335.1|ADFP01000047.1 Genbank CDS 118527 118643 . - 0 ID=cds-EFB91302.1;Parent=gene-HMPREF7215_0396;Dbxref=NCBI_GP:EFB91302.1;Name=EFB91302.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0396;product=hypothetical protein;protein_id=EFB91302.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 118760 118837 . + . ID=gene-HMPREF7215_0397;Name=HMPREF7215_0397;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0397 GCA_000177335.1|ADFP01000047.1 Genbank tRNA 118760 118837 . + . ID=rna-HMPREF7215_0397;Parent=gene-HMPREF7215_0397;gbkey=tRNA;locus_tag=HMPREF7215_0397;product=tRNA-Pro GCA_000177335.1|ADFP01000047.1 Genbank exon 118760 118837 . + . ID=exon-HMPREF7215_0397-1;Parent=rna-HMPREF7215_0397;gbkey=tRNA;locus_tag=HMPREF7215_0397;product=tRNA-Pro GCA_000177335.1|ADFP01000047.1 Genbank gene 118893 119702 . + . ID=gene-HMPREF7215_0398;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0398 GCA_000177335.1|ADFP01000047.1 Genbank CDS 118893 119702 . + 0 ID=cds-EFB91303.1;Parent=gene-HMPREF7215_0398;Dbxref=NCBI_GP:EFB91303.1;Name=EFB91303.1;Note=identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755;gbkey=CDS;gene=ksgA;locus_tag=HMPREF7215_0398;product=dimethyladenosine transferase;protein_id=EFB91303.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 119770 121626 . - . ID=gene-HMPREF7215_0399;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0399 GCA_000177335.1|ADFP01000047.1 Genbank CDS 119770 121626 . - 0 ID=cds-EFB91304.1;Parent=gene-HMPREF7215_0399;Dbxref=NCBI_GP:EFB91304.1;Name=EFB91304.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389;gbkey=CDS;gene=recQ;locus_tag=HMPREF7215_0399;product=ATP-dependent DNA helicase RecQ;protein_id=EFB91304.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 121728 122207 . - . ID=gene-HMPREF7215_0400;Name=HMPREF7215_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0400 GCA_000177335.1|ADFP01000047.1 Genbank CDS 121728 122207 . - 0 ID=cds-EFB91305.1;Parent=gene-HMPREF7215_0400;Dbxref=NCBI_GP:EFB91305.1;Name=EFB91305.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;locus_tag=HMPREF7215_0400;product=CBS domain protein;protein_id=EFB91305.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 122262 123545 . - . ID=gene-HMPREF7215_0401;Name=HMPREF7215_0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0401 GCA_000177335.1|ADFP01000047.1 Genbank CDS 122262 123545 . - 0 ID=cds-EFB91306.1;Parent=gene-HMPREF7215_0401;Dbxref=NCBI_GP:EFB91306.1;Name=EFB91306.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM PF02040%3B match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF7215_0401;product=citrate transporter;protein_id=EFB91306.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 123806 124957 . - . ID=gene-HMPREF7215_0402;Name=HMPREF7215_0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0402 GCA_000177335.1|ADFP01000047.1 Genbank CDS 123806 124957 . - 0 ID=cds-EFB91307.1;Parent=gene-HMPREF7215_0402;Dbxref=NCBI_GP:EFB91307.1;Name=EFB91307.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF7215_0402;product=Na+/H+ antiporter family protein;protein_id=EFB91307.1;transl_table=11 GCA_000177335.1|ADFP01000047.1 Genbank gene 124732 125115 . - . ID=gene-HMPREF7215_0403;Name=HMPREF7215_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0403 GCA_000177335.1|ADFP01000047.1 Genbank CDS 124732 125115 . - 0 ID=cds-EFB91308.1;Parent=gene-HMPREF7215_0403;Dbxref=NCBI_GP:EFB91308.1;Name=EFB91308.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_0403;product=hypothetical protein;protein_id=EFB91308.1;transl_table=11 ##sequence-region ADFP01000046.1 1 29893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000046.1 Genbank region 1 29893 . + . ID=ADFP01000046.1:1..29893;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000046.1 Genbank gene 41 250 . - . ID=gene-HMPREF7215_2743;Name=HMPREF7215_2743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2743 GCA_000177335.1|ADFP01000046.1 Genbank CDS 41 250 . - 0 ID=cds-EFB91309.1;Parent=gene-HMPREF7215_2743;Dbxref=NCBI_GP:EFB91309.1;Name=EFB91309.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2743;product=hydrid cluster protein-associated redox disulfide domain protein;protein_id=EFB91309.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 375 2120 . - . ID=gene-HMPREF7215_2744;Name=HMPREF7215_2744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2744 GCA_000177335.1|ADFP01000046.1 Genbank CDS 375 2120 . - 0 ID=cds-EFB91310.1;Parent=gene-HMPREF7215_2744;Dbxref=NCBI_GP:EFB91310.1;Name=EFB91310.1;Note=identified by match to protein family HMM PF00614;gbkey=CDS;locus_tag=HMPREF7215_2744;product=phospholipase D domain protein;protein_id=EFB91310.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 2279 3310 . + . ID=gene-HMPREF7215_2745;Name=HMPREF7215_2745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2745 GCA_000177335.1|ADFP01000046.1 Genbank CDS 2279 3310 . + 0 ID=cds-EFB91311.1;Parent=gene-HMPREF7215_2745;Dbxref=NCBI_GP:EFB91311.1;Name=EFB91311.1;Note=identified by match to protein family HMM PF00710;gbkey=CDS;locus_tag=HMPREF7215_2745;product=Asparaginase;protein_id=EFB91311.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 3366 4010 . - . ID=gene-HMPREF7215_2746;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2746 GCA_000177335.1|ADFP01000046.1 Genbank CDS 3366 4010 . - 0 ID=cds-EFB91312.1;Parent=gene-HMPREF7215_2746;Dbxref=NCBI_GP:EFB91312.1;Name=EFB91312.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;locus_tag=HMPREF7215_2746;product=deoxyribose-phosphate aldolase;protein_id=EFB91312.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 4126 4929 . + . ID=gene-HMPREF7215_2747;Name=HMPREF7215_2747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2747 GCA_000177335.1|ADFP01000046.1 Genbank CDS 4126 4929 . + 0 ID=cds-EFB91313.1;Parent=gene-HMPREF7215_2747;Dbxref=NCBI_GP:EFB91313.1;Name=EFB91313.1;Note=identified by match to protein family HMM PF03734;gbkey=CDS;locus_tag=HMPREF7215_2747;product=ErfK/YbiS/YcfS/YnhG;protein_id=EFB91313.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 5005 5083 . + . ID=gene-HMPREF7215_2748;Name=HMPREF7215_2748;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2748 GCA_000177335.1|ADFP01000046.1 Genbank tRNA 5005 5083 . + . ID=rna-HMPREF7215_2748;Parent=gene-HMPREF7215_2748;gbkey=tRNA;locus_tag=HMPREF7215_2748;product=tRNA-Met GCA_000177335.1|ADFP01000046.1 Genbank exon 5005 5083 . + . ID=exon-HMPREF7215_2748-1;Parent=rna-HMPREF7215_2748;gbkey=tRNA;locus_tag=HMPREF7215_2748;product=tRNA-Met GCA_000177335.1|ADFP01000046.1 Genbank gene 5089 5165 . + . ID=gene-HMPREF7215_2749;Name=HMPREF7215_2749;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2749 GCA_000177335.1|ADFP01000046.1 Genbank tRNA 5089 5165 . + . ID=rna-HMPREF7215_2749;Parent=gene-HMPREF7215_2749;gbkey=tRNA;locus_tag=HMPREF7215_2749;product=tRNA-Met GCA_000177335.1|ADFP01000046.1 Genbank exon 5089 5165 . + . ID=exon-HMPREF7215_2749-1;Parent=rna-HMPREF7215_2749;gbkey=tRNA;locus_tag=HMPREF7215_2749;product=tRNA-Met GCA_000177335.1|ADFP01000046.1 Genbank gene 5237 5359 . - . ID=gene-HMPREF7215_2750;Name=HMPREF7215_2750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2750 GCA_000177335.1|ADFP01000046.1 Genbank CDS 5237 5359 . - 0 ID=cds-EFB91314.1;Parent=gene-HMPREF7215_2750;Dbxref=NCBI_GP:EFB91314.1;Name=EFB91314.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2750;product=hypothetical protein;protein_id=EFB91314.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 5360 6580 . + . ID=gene-HMPREF7215_2751;Name=HMPREF7215_2751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2751 GCA_000177335.1|ADFP01000046.1 Genbank CDS 5360 6580 . + 0 ID=cds-EFB91315.1;Parent=gene-HMPREF7215_2751;Dbxref=NCBI_GP:EFB91315.1;Name=EFB91315.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF7215_2751;product=site-specific recombinase%2C phage integrase family;protein_id=EFB91315.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 6618 7514 . - . ID=gene-HMPREF7215_2752;Name=HMPREF7215_2752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2752 GCA_000177335.1|ADFP01000046.1 Genbank CDS 6618 7514 . - 0 ID=cds-EFB91316.1;Parent=gene-HMPREF7215_2752;Dbxref=NCBI_GP:EFB91316.1;Name=EFB91316.1;Note=identified by match to protein family HMM PF02086;gbkey=CDS;locus_tag=HMPREF7215_2752;product=D12 class N6 adenine-specific DNA methyltransferase;protein_id=EFB91316.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 7566 9236 . - . ID=gene-HMPREF7215_2753;Name=HMPREF7215_2753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2753 GCA_000177335.1|ADFP01000046.1 Genbank CDS 7566 9236 . - 0 ID=cds-EFB91317.1;Parent=gene-HMPREF7215_2753;Dbxref=NCBI_GP:EFB91317.1;Name=EFB91317.1;gbkey=CDS;locus_tag=HMPREF7215_2753;product=hypothetical protein;protein_id=EFB91317.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 9327 10274 . - . ID=gene-HMPREF7215_2754;Name=HMPREF7215_2754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2754 GCA_000177335.1|ADFP01000046.1 Genbank CDS 9327 10274 . - 0 ID=cds-EFB91318.1;Parent=gene-HMPREF7215_2754;Dbxref=NCBI_GP:EFB91318.1;Name=EFB91318.1;gbkey=CDS;locus_tag=HMPREF7215_2754;product=hypothetical protein;protein_id=EFB91318.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 10450 11388 . - . ID=gene-HMPREF7215_2755;Name=HMPREF7215_2755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2755 GCA_000177335.1|ADFP01000046.1 Genbank CDS 10450 11388 . - 0 ID=cds-EFB91319.1;Parent=gene-HMPREF7215_2755;Dbxref=NCBI_GP:EFB91319.1;Name=EFB91319.1;gbkey=CDS;locus_tag=HMPREF7215_2755;product=hypothetical protein;protein_id=EFB91319.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 11429 11734 . + . ID=gene-HMPREF7215_2756;Name=HMPREF7215_2756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2756 GCA_000177335.1|ADFP01000046.1 Genbank CDS 11429 11734 . + 0 ID=cds-EFB91320.1;Parent=gene-HMPREF7215_2756;Dbxref=NCBI_GP:EFB91320.1;Name=EFB91320.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2756;product=hypothetical protein;protein_id=EFB91320.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 12394 12522 . - . ID=gene-HMPREF7215_2757;Name=HMPREF7215_2757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2757 GCA_000177335.1|ADFP01000046.1 Genbank CDS 12394 12522 . - 0 ID=cds-EFB91321.1;Parent=gene-HMPREF7215_2757;Dbxref=NCBI_GP:EFB91321.1;Name=EFB91321.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2757;product=hypothetical protein;protein_id=EFB91321.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 12512 13648 . - . ID=gene-HMPREF7215_2758;Name=HMPREF7215_2758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2758 GCA_000177335.1|ADFP01000046.1 Genbank CDS 12512 13648 . - 0 ID=cds-EFB91322.1;Parent=gene-HMPREF7215_2758;Dbxref=NCBI_GP:EFB91322.1;Name=EFB91322.1;gbkey=CDS;locus_tag=HMPREF7215_2758;product=hypothetical protein;protein_id=EFB91322.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 13727 13948 . - . ID=gene-HMPREF7215_2759;Name=HMPREF7215_2759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2759 GCA_000177335.1|ADFP01000046.1 Genbank CDS 13727 13948 . - 0 ID=cds-EFB91323.1;Parent=gene-HMPREF7215_2759;Dbxref=NCBI_GP:EFB91323.1;Name=EFB91323.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2759;product=hypothetical protein;protein_id=EFB91323.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 14632 14820 . + . ID=gene-HMPREF7215_2760;Name=HMPREF7215_2760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2760 GCA_000177335.1|ADFP01000046.1 Genbank CDS 14632 14820 . + 0 ID=cds-EFB91324.1;Parent=gene-HMPREF7215_2760;Dbxref=NCBI_GP:EFB91324.1;Name=EFB91324.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2760;product=hypothetical protein;protein_id=EFB91324.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 15240 15446 . + . ID=gene-HMPREF7215_2761;Name=HMPREF7215_2761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2761 GCA_000177335.1|ADFP01000046.1 Genbank CDS 15240 15446 . + 0 ID=cds-EFB91325.1;Parent=gene-HMPREF7215_2761;Dbxref=NCBI_GP:EFB91325.1;Name=EFB91325.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2761;product=hypothetical protein;protein_id=EFB91325.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 15615 15863 . + . ID=gene-HMPREF7215_2763;Name=HMPREF7215_2763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2763 GCA_000177335.1|ADFP01000046.1 Genbank CDS 15615 15863 . + 0 ID=cds-EFB91326.1;Parent=gene-HMPREF7215_2763;Dbxref=NCBI_GP:EFB91326.1;Name=EFB91326.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2763;product=hypothetical protein;protein_id=EFB91326.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 15827 16801 . - . ID=gene-HMPREF7215_2762;Name=HMPREF7215_2762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2762 GCA_000177335.1|ADFP01000046.1 Genbank CDS 15827 16801 . - 0 ID=cds-EFB91327.1;Parent=gene-HMPREF7215_2762;Dbxref=NCBI_GP:EFB91327.1;Name=EFB91327.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2762;product=hypothetical protein;protein_id=EFB91327.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 16934 17065 . + . ID=gene-HMPREF7215_2764;Name=HMPREF7215_2764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2764 GCA_000177335.1|ADFP01000046.1 Genbank CDS 16934 17065 . + 0 ID=cds-EFB91328.1;Parent=gene-HMPREF7215_2764;Dbxref=NCBI_GP:EFB91328.1;Name=EFB91328.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2764;product=hypothetical protein;protein_id=EFB91328.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 17034 17207 . + . ID=gene-HMPREF7215_2765;Name=HMPREF7215_2765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2765 GCA_000177335.1|ADFP01000046.1 Genbank CDS 17034 17207 . + 0 ID=cds-EFB91329.1;Parent=gene-HMPREF7215_2765;Dbxref=NCBI_GP:EFB91329.1;Name=EFB91329.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2765;product=hypothetical protein;protein_id=EFB91329.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 17249 17728 . - . ID=gene-HMPREF7215_2766;Name=HMPREF7215_2766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2766 GCA_000177335.1|ADFP01000046.1 Genbank CDS 17249 17728 . - 0 ID=cds-EFB91330.1;Parent=gene-HMPREF7215_2766;Dbxref=NCBI_GP:EFB91330.1;Name=EFB91330.1;gbkey=CDS;locus_tag=HMPREF7215_2766;product=hypothetical protein;protein_id=EFB91330.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 17715 17894 . - . ID=gene-HMPREF7215_2767;Name=HMPREF7215_2767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2767 GCA_000177335.1|ADFP01000046.1 Genbank CDS 17715 17894 . - 0 ID=cds-EFB91331.1;Parent=gene-HMPREF7215_2767;Dbxref=NCBI_GP:EFB91331.1;Name=EFB91331.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2767;product=hypothetical protein;protein_id=EFB91331.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 17985 18314 . + . ID=gene-HMPREF7215_2768;Name=HMPREF7215_2768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2768 GCA_000177335.1|ADFP01000046.1 Genbank CDS 17985 18314 . + 0 ID=cds-EFB91332.1;Parent=gene-HMPREF7215_2768;Dbxref=NCBI_GP:EFB91332.1;Name=EFB91332.1;Note=identified by match to protein family HMM PF05930;gbkey=CDS;locus_tag=HMPREF7215_2768;product=transcriptional regulator%2C AlpA family;protein_id=EFB91332.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 18298 18489 . + . ID=gene-HMPREF7215_2769;Name=HMPREF7215_2769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2769 GCA_000177335.1|ADFP01000046.1 Genbank CDS 18298 18489 . + 0 ID=cds-EFB91333.1;Parent=gene-HMPREF7215_2769;Dbxref=NCBI_GP:EFB91333.1;Name=EFB91333.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2769;product=hypothetical protein;protein_id=EFB91333.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 18657 18854 . + . ID=gene-HMPREF7215_2770;Name=HMPREF7215_2770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2770 GCA_000177335.1|ADFP01000046.1 Genbank CDS 18657 18854 . + 0 ID=cds-EFB91334.1;Parent=gene-HMPREF7215_2770;Dbxref=NCBI_GP:EFB91334.1;Name=EFB91334.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2770;product=hypothetical protein;protein_id=EFB91334.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 19042 19401 . + . ID=gene-HMPREF7215_2771;Name=HMPREF7215_2771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2771 GCA_000177335.1|ADFP01000046.1 Genbank CDS 19042 19401 . + 0 ID=cds-EFB91335.1;Parent=gene-HMPREF7215_2771;Dbxref=NCBI_GP:EFB91335.1;Name=EFB91335.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_2771;product=hypothetical protein;protein_id=EFB91335.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 19446 20504 . + . ID=gene-HMPREF7215_2772;Name=HMPREF7215_2772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2772 GCA_000177335.1|ADFP01000046.1 Genbank CDS 19446 20504 . + 0 ID=cds-EFB91336.1;Parent=gene-HMPREF7215_2772;Dbxref=NCBI_GP:EFB91336.1;Name=EFB91336.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2772;product=hypothetical protein;protein_id=EFB91336.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 20511 21842 . + . ID=gene-HMPREF7215_2773;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2773 GCA_000177335.1|ADFP01000046.1 Genbank CDS 20511 21842 . + 0 ID=cds-EFB91337.1;Parent=gene-HMPREF7215_2773;Dbxref=NCBI_GP:EFB91337.1;Name=EFB91337.1;Note=identified by match to protein family HMM PF00772;gbkey=CDS;gene=dnaB;locus_tag=HMPREF7215_2773;product=replicative DNA helicase;protein_id=EFB91337.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 21887 22159 . - . ID=gene-HMPREF7215_2774;Name=HMPREF7215_2774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2774 GCA_000177335.1|ADFP01000046.1 Genbank CDS 21887 22159 . - 0 ID=cds-EFB91338.1;Parent=gene-HMPREF7215_2774;Dbxref=NCBI_GP:EFB91338.1;Name=EFB91338.1;Note=identified by match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_2774;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91338.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 22160 22423 . - . ID=gene-HMPREF7215_2775;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2775 GCA_000177335.1|ADFP01000046.1 Genbank CDS 22160 22423 . - 0 ID=cds-EFB91339.1;Parent=gene-HMPREF7215_2775;Dbxref=NCBI_GP:EFB91339.1;Name=EFB91339.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;gene=dinJ;locus_tag=HMPREF7215_2775;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91339.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 22497 22985 . + . ID=gene-HMPREF7215_2776;Name=HMPREF7215_2776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2776 GCA_000177335.1|ADFP01000046.1 Genbank CDS 22497 22985 . + 0 ID=cds-EFB91340.1;Parent=gene-HMPREF7215_2776;Dbxref=NCBI_GP:EFB91340.1;Name=EFB91340.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2776;product=hypothetical protein;protein_id=EFB91340.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 23140 23547 . - . ID=gene-HMPREF7215_2777;Name=HMPREF7215_2777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2777 GCA_000177335.1|ADFP01000046.1 Genbank CDS 23140 23547 . - 0 ID=cds-EFB91341.1;Parent=gene-HMPREF7215_2777;Dbxref=NCBI_GP:EFB91341.1;Name=EFB91341.1;Note=identified by match to protein family HMM PF03681;gbkey=CDS;locus_tag=HMPREF7215_2777;product=toxin-antitoxin system%2C antitoxin component%2C HicB family;protein_id=EFB91341.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 23593 23772 . - . ID=gene-HMPREF7215_2778;Name=HMPREF7215_2778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2778 GCA_000177335.1|ADFP01000046.1 Genbank CDS 23593 23772 . - 0 ID=cds-EFB91342.1;Parent=gene-HMPREF7215_2778;Dbxref=NCBI_GP:EFB91342.1;Name=EFB91342.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;locus_tag=HMPREF7215_2778;product=toxin-antitoxin system%2C toxin component%2C HicA family;protein_id=EFB91342.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 23859 24089 . + . ID=gene-HMPREF7215_2779;Name=HMPREF7215_2779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2779 GCA_000177335.1|ADFP01000046.1 Genbank CDS 23859 24089 . + 0 ID=cds-EFB91343.1;Parent=gene-HMPREF7215_2779;Dbxref=NCBI_GP:EFB91343.1;Name=EFB91343.1;Note=overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_2779;product=hypothetical protein;protein_id=EFB91343.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 24086 24763 . + . ID=gene-HMPREF7215_2780;Name=HMPREF7215_2780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2780 GCA_000177335.1|ADFP01000046.1 Genbank CDS 24086 24763 . + 0 ID=cds-EFB91344.1;Parent=gene-HMPREF7215_2780;Dbxref=NCBI_GP:EFB91344.1;Name=EFB91344.1;Note=identified by match to protein family HMM PF00589%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_2780;product=site-specific recombinase%2C phage integrase family;protein_id=EFB91344.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 25219 25713 . + . ID=gene-HMPREF7215_2781;Name=HMPREF7215_2781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2781 GCA_000177335.1|ADFP01000046.1 Genbank CDS 25219 25713 . + 0 ID=cds-EFB91345.1;Parent=gene-HMPREF7215_2781;Dbxref=NCBI_GP:EFB91345.1;Name=EFB91345.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2781;product=hypothetical protein;protein_id=EFB91345.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 25598 27424 . + . ID=gene-HMPREF7215_2782;Name=HMPREF7215_2782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2782 GCA_000177335.1|ADFP01000046.1 Genbank CDS 25598 27424 . + 0 ID=cds-EFB91346.1;Parent=gene-HMPREF7215_2782;Dbxref=NCBI_GP:EFB91346.1;Name=EFB91346.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF05876;gbkey=CDS;locus_tag=HMPREF7215_2782;product=phage terminase large subunit (GpA);protein_id=EFB91346.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 27523 27735 . + . ID=gene-HMPREF7215_2783;Name=HMPREF7215_2783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2783 GCA_000177335.1|ADFP01000046.1 Genbank CDS 27523 27735 . + 0 ID=cds-EFB91347.1;Parent=gene-HMPREF7215_2783;Dbxref=NCBI_GP:EFB91347.1;Name=EFB91347.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2783;product=hypothetical protein;protein_id=EFB91347.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 27720 29249 . + . ID=gene-HMPREF7215_2784;Name=HMPREF7215_2784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2784 GCA_000177335.1|ADFP01000046.1 Genbank CDS 27720 29249 . + 0 ID=cds-EFB91348.1;Parent=gene-HMPREF7215_2784;Dbxref=NCBI_GP:EFB91348.1;Name=EFB91348.1;Note=identified by match to protein family HMM PF05136%3B match to protein family HMM TIGR01539;gbkey=CDS;locus_tag=HMPREF7215_2784;product=phage portal protein%2C lambda family;protein_id=EFB91348.1;transl_table=11 GCA_000177335.1|ADFP01000046.1 Genbank gene 29215 29893 . + . ID=gene-HMPREF7215_2785;Name=HMPREF7215_2785;end_range=29893,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2785;partial=true GCA_000177335.1|ADFP01000046.1 Genbank CDS 29215 29893 . + 0 ID=cds-EFB91349.1;Parent=gene-HMPREF7215_2785;Dbxref=NCBI_GP:EFB91349.1;Name=EFB91349.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04586;end_range=29893,.;gbkey=CDS;locus_tag=HMPREF7215_2785;partial=true;product=caudovirus prohead protease;protein_id=EFB91349.1;transl_table=11 ##sequence-region ADFP01000045.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000045.1 Genbank region 1 773 . + . ID=ADFP01000045.1:1..773;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000045.1 Genbank gene 641 773 . + . ID=gene-HMPREF7215_1668;Name=HMPREF7215_1668;end_range=773,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1668;partial=true GCA_000177335.1|ADFP01000045.1 Genbank CDS 641 773 . + 0 ID=cds-EFB91350.1;Parent=gene-HMPREF7215_1668;Dbxref=NCBI_GP:EFB91350.1;Name=EFB91350.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=773,.;gbkey=CDS;locus_tag=HMPREF7215_1668;partial=true;product=hypothetical protein;protein_id=EFB91350.1;transl_table=11 ##sequence-region ADFP01000044.1 1 37387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000044.1 Genbank region 1 37387 . + . ID=ADFP01000044.1:1..37387;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000044.1 Genbank gene 48 1175 . - . ID=gene-HMPREF7215_2165;Name=HMPREF7215_2165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2165 GCA_000177335.1|ADFP01000044.1 Genbank CDS 48 1175 . - 0 ID=cds-EFB91351.1;Parent=gene-HMPREF7215_2165;Dbxref=NCBI_GP:EFB91351.1;Name=EFB91351.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_2165;product=transaminase;protein_id=EFB91351.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 1189 2001 . - . ID=gene-HMPREF7215_2166;Name=HMPREF7215_2166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2166 GCA_000177335.1|ADFP01000044.1 Genbank CDS 1189 2001 . - 0 ID=cds-EFB91352.1;Parent=gene-HMPREF7215_2166;Dbxref=NCBI_GP:EFB91352.1;Name=EFB91352.1;Note=identified by match to protein family HMM PF02811%3B match to protein family HMM TIGR01856;gbkey=CDS;locus_tag=HMPREF7215_2166;product=histidinol phosphate phosphatase HisJ family;protein_id=EFB91352.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 2014 3495 . - . ID=gene-HMPREF7215_2167;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=HMPREF7215_2167 GCA_000177335.1|ADFP01000044.1 Genbank CDS 2014 3495 . - 0 ID=cds-EFB91353.1;Parent=gene-HMPREF7215_2167;Dbxref=NCBI_GP:EFB91353.1;Name=EFB91353.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM TIGR00931;gbkey=CDS;gene=nhaC;locus_tag=HMPREF7215_2167;product=Na+/H+ antiporter NhaC;protein_id=EFB91353.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 3620 3790 . - . ID=gene-HMPREF7215_2168;Name=HMPREF7215_2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2168 GCA_000177335.1|ADFP01000044.1 Genbank CDS 3620 3790 . - 0 ID=cds-EFB91354.1;Parent=gene-HMPREF7215_2168;Dbxref=NCBI_GP:EFB91354.1;Name=EFB91354.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2168;product=hypothetical protein;protein_id=EFB91354.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 3787 3924 . - . ID=gene-HMPREF7215_2169;Name=HMPREF7215_2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2169 GCA_000177335.1|ADFP01000044.1 Genbank CDS 3787 3924 . - 0 ID=cds-EFB91355.1;Parent=gene-HMPREF7215_2169;Dbxref=NCBI_GP:EFB91355.1;Name=EFB91355.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2169;product=hypothetical protein;protein_id=EFB91355.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 3930 4232 . - . ID=gene-HMPREF7215_2170;Name=HMPREF7215_2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2170 GCA_000177335.1|ADFP01000044.1 Genbank CDS 3930 4232 . - 0 ID=cds-EFB91356.1;Parent=gene-HMPREF7215_2170;Dbxref=NCBI_GP:EFB91356.1;Name=EFB91356.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2170;product=hypothetical protein;protein_id=EFB91356.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 4463 4606 . - . ID=gene-HMPREF7215_2171;Name=HMPREF7215_2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2171 GCA_000177335.1|ADFP01000044.1 Genbank CDS 4463 4606 . - 0 ID=cds-EFB91357.1;Parent=gene-HMPREF7215_2171;Dbxref=NCBI_GP:EFB91357.1;Name=EFB91357.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2171;product=hypothetical protein;protein_id=EFB91357.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 4835 5266 . + . ID=gene-HMPREF7215_2172;Name=HMPREF7215_2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2172 GCA_000177335.1|ADFP01000044.1 Genbank CDS 4835 5266 . + 0 ID=cds-EFB91358.1;Parent=gene-HMPREF7215_2172;Dbxref=NCBI_GP:EFB91358.1;Name=EFB91358.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=HMPREF7215_2172;product=transcriptional regulator%2C MarR family;protein_id=EFB91358.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 5464 5586 . - . ID=gene-HMPREF7215_2173;Name=HMPREF7215_2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2173 GCA_000177335.1|ADFP01000044.1 Genbank CDS 5464 5586 . - 0 ID=cds-EFB91359.1;Parent=gene-HMPREF7215_2173;Dbxref=NCBI_GP:EFB91359.1;Name=EFB91359.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2173;product=hypothetical protein;protein_id=EFB91359.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 5654 5821 . + . ID=gene-HMPREF7215_2174;Name=HMPREF7215_2174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2174 GCA_000177335.1|ADFP01000044.1 Genbank CDS 5654 5821 . + 0 ID=cds-EFB91360.1;Parent=gene-HMPREF7215_2174;Dbxref=NCBI_GP:EFB91360.1;Name=EFB91360.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2174;product=hypothetical protein;protein_id=EFB91360.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 5940 6428 . + . ID=gene-HMPREF7215_2175;Name=HMPREF7215_2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2175 GCA_000177335.1|ADFP01000044.1 Genbank CDS 5940 6428 . + 0 ID=cds-EFB91361.1;Parent=gene-HMPREF7215_2175;Dbxref=NCBI_GP:EFB91361.1;Name=EFB91361.1;Note=identified by match to protein family HMM PF01899;gbkey=CDS;locus_tag=HMPREF7215_2175;product=putative monovalent cation/H+ antiporter subunit E;protein_id=EFB91361.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 6425 6697 . + . ID=gene-HMPREF7215_2176;Name=HMPREF7215_2176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2176 GCA_000177335.1|ADFP01000044.1 Genbank CDS 6425 6697 . + 0 ID=cds-EFB91362.1;Parent=gene-HMPREF7215_2176;Dbxref=NCBI_GP:EFB91362.1;Name=EFB91362.1;Note=identified by match to protein family HMM PF04066;gbkey=CDS;locus_tag=HMPREF7215_2176;product=putative monovalent cation/H+ antiporter subunit F;protein_id=EFB91362.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 6694 7110 . + . ID=gene-HMPREF7215_2177;Name=HMPREF7215_2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2177 GCA_000177335.1|ADFP01000044.1 Genbank CDS 6694 7110 . + 0 ID=cds-EFB91363.1;Parent=gene-HMPREF7215_2177;Dbxref=NCBI_GP:EFB91363.1;Name=EFB91363.1;Note=identified by match to protein family HMM PF03334%3B match to protein family HMM TIGR01300;gbkey=CDS;locus_tag=HMPREF7215_2177;product=putative monovalent cation/H+ antiporter subunit G;protein_id=EFB91363.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 7113 7373 . + . ID=gene-HMPREF7215_2178;Name=HMPREF7215_2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2178 GCA_000177335.1|ADFP01000044.1 Genbank CDS 7113 7373 . + 0 ID=cds-EFB91364.1;Parent=gene-HMPREF7215_2178;Dbxref=NCBI_GP:EFB91364.1;Name=EFB91364.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2178;product=hypothetical protein;protein_id=EFB91364.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 7370 7654 . + . ID=gene-HMPREF7215_2179;Name=HMPREF7215_2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2179 GCA_000177335.1|ADFP01000044.1 Genbank CDS 7370 7654 . + 0 ID=cds-EFB91365.1;Parent=gene-HMPREF7215_2179;Dbxref=NCBI_GP:EFB91365.1;Name=EFB91365.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2179;product=monovalent cation/H+ antiporter subunit B domain protein;protein_id=EFB91365.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 7651 8166 . + . ID=gene-HMPREF7215_2180;Name=HMPREF7215_2180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2180 GCA_000177335.1|ADFP01000044.1 Genbank CDS 7651 8166 . + 0 ID=cds-EFB91366.1;Parent=gene-HMPREF7215_2180;Dbxref=NCBI_GP:EFB91366.1;Name=EFB91366.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04039;gbkey=CDS;locus_tag=HMPREF7215_2180;product=putative monovalent cation/H+ antiporter subunit B;protein_id=EFB91366.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 8153 8506 . + . ID=gene-HMPREF7215_2181;Name=HMPREF7215_2181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2181 GCA_000177335.1|ADFP01000044.1 Genbank CDS 8153 8506 . + 0 ID=cds-EFB91367.1;Parent=gene-HMPREF7215_2181;Dbxref=NCBI_GP:EFB91367.1;Name=EFB91367.1;Note=identified by match to protein family HMM PF00420;gbkey=CDS;locus_tag=HMPREF7215_2181;product=putative monovalent cation/H+ antiporter subunit C;protein_id=EFB91367.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 8503 10068 . + . ID=gene-HMPREF7215_2182;Name=HMPREF7215_2182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2182 GCA_000177335.1|ADFP01000044.1 Genbank CDS 8503 10068 . + 0 ID=cds-EFB91368.1;Parent=gene-HMPREF7215_2182;Dbxref=NCBI_GP:EFB91368.1;Name=EFB91368.1;Note=identified by match to protein family HMM PF00361;gbkey=CDS;locus_tag=HMPREF7215_2182;product=putative monovalent cation/H+ antiporter subunit D;protein_id=EFB91368.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 10068 10403 . + . ID=gene-HMPREF7215_2183;Name=HMPREF7215_2183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2183 GCA_000177335.1|ADFP01000044.1 Genbank CDS 10068 10403 . + 0 ID=cds-EFB91369.1;Parent=gene-HMPREF7215_2183;Dbxref=NCBI_GP:EFB91369.1;Name=EFB91369.1;gbkey=CDS;locus_tag=HMPREF7215_2183;product=hypothetical protein;protein_id=EFB91369.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 10416 10886 . + . ID=gene-HMPREF7215_2184;Name=HMPREF7215_2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2184 GCA_000177335.1|ADFP01000044.1 Genbank CDS 10416 10886 . + 0 ID=cds-EFB91370.1;Parent=gene-HMPREF7215_2184;Dbxref=NCBI_GP:EFB91370.1;Name=EFB91370.1;Note=identified by match to protein family HMM PF01058;gbkey=CDS;locus_tag=HMPREF7215_2184;product=NADH ubiquinone oxidoreductase%2C 20 Kd subunit;protein_id=EFB91370.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 10893 11486 . + . ID=gene-HMPREF7215_2185;Name=HMPREF7215_2185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2185 GCA_000177335.1|ADFP01000044.1 Genbank CDS 10893 11486 . + 0 ID=cds-EFB91371.1;Parent=gene-HMPREF7215_2185;Dbxref=NCBI_GP:EFB91371.1;Name=EFB91371.1;Note=identified by match to protein family HMM PF00329;gbkey=CDS;locus_tag=HMPREF7215_2185;product=respiratory-chain NADH dehydrogenase%2C 30 Kd subunit;protein_id=EFB91371.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 11495 12736 . + . ID=gene-HMPREF7215_2186;Name=HMPREF7215_2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2186 GCA_000177335.1|ADFP01000044.1 Genbank CDS 11495 12736 . + 0 ID=cds-EFB91372.1;Parent=gene-HMPREF7215_2186;Dbxref=NCBI_GP:EFB91372.1;Name=EFB91372.1;Note=identified by match to protein family HMM PF00346;gbkey=CDS;locus_tag=HMPREF7215_2186;product=respiratory-chain NADH dehydrogenase%2C 49 Kd subunit;protein_id=EFB91372.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 12730 13716 . + . ID=gene-HMPREF7215_2187;Name=HMPREF7215_2187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2187 GCA_000177335.1|ADFP01000044.1 Genbank CDS 12730 13716 . + 0 ID=cds-EFB91373.1;Parent=gene-HMPREF7215_2187;Dbxref=NCBI_GP:EFB91373.1;Name=EFB91373.1;Note=identified by match to protein family HMM PF00146;gbkey=CDS;locus_tag=HMPREF7215_2187;product=NADH dehydrogenase;protein_id=EFB91373.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 13738 14316 . + . ID=gene-HMPREF7215_2188;Name=HMPREF7215_2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2188 GCA_000177335.1|ADFP01000044.1 Genbank CDS 13738 14316 . + 0 ID=cds-EFB91374.1;Parent=gene-HMPREF7215_2188;Dbxref=NCBI_GP:EFB91374.1;Name=EFB91374.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_2188;product=4Fe-4S binding domain protein;protein_id=EFB91374.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 14646 15998 . + . ID=gene-HMPREF7215_2189;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2189 GCA_000177335.1|ADFP01000044.1 Genbank CDS 14646 15998 . + 0 ID=cds-EFB91375.1;Parent=gene-HMPREF7215_2189;Dbxref=NCBI_GP:EFB91375.1;Name=EFB91375.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400;gbkey=CDS;gene=mgtE;locus_tag=HMPREF7215_2189;product=magnesium transporter;protein_id=EFB91375.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 16070 17401 . + . ID=gene-HMPREF7215_2190;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2190 GCA_000177335.1|ADFP01000044.1 Genbank CDS 16070 17401 . + 0 ID=cds-EFB91376.1;Parent=gene-HMPREF7215_2190;Dbxref=NCBI_GP:EFB91376.1;Name=EFB91376.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM TIGR00400;gbkey=CDS;gene=mgtE;locus_tag=HMPREF7215_2190;product=magnesium transporter;protein_id=EFB91376.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 17455 18693 . + . ID=gene-HMPREF7215_2191;Name=HMPREF7215_2191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2191 GCA_000177335.1|ADFP01000044.1 Genbank CDS 17455 18693 . + 0 ID=cds-EFB91377.1;Parent=gene-HMPREF7215_2191;Dbxref=NCBI_GP:EFB91377.1;Name=EFB91377.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF7215_2191;product=transporter%2C major facilitator family protein;protein_id=EFB91377.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 18751 19701 . + . ID=gene-HMPREF7215_2192;Name=HMPREF7215_2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2192 GCA_000177335.1|ADFP01000044.1 Genbank CDS 18751 19701 . + 0 ID=cds-EFB91378.1;Parent=gene-HMPREF7215_2192;Dbxref=NCBI_GP:EFB91378.1;Name=EFB91378.1;gbkey=CDS;locus_tag=HMPREF7215_2192;product=hypothetical protein;protein_id=EFB91378.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 19970 21229 . - . ID=gene-HMPREF7215_2193;Name=HMPREF7215_2193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2193 GCA_000177335.1|ADFP01000044.1 Genbank CDS 19970 21229 . - 0 ID=cds-EFB91379.1;Parent=gene-HMPREF7215_2193;Dbxref=NCBI_GP:EFB91379.1;Name=EFB91379.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=HMPREF7215_2193;product=transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein;protein_id=EFB91379.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 21519 22475 . - . ID=gene-HMPREF7215_2194;Name=HMPREF7215_2194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2194 GCA_000177335.1|ADFP01000044.1 Genbank CDS 21519 22475 . - 0 ID=cds-EFB91380.1;Parent=gene-HMPREF7215_2194;Dbxref=NCBI_GP:EFB91380.1;Name=EFB91380.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;locus_tag=HMPREF7215_2194;product=kinase%2C PfkB family;protein_id=EFB91380.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 22474 22626 . + . ID=gene-HMPREF7215_2195;Name=HMPREF7215_2195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2195 GCA_000177335.1|ADFP01000044.1 Genbank CDS 22474 22626 . + 0 ID=cds-EFB91381.1;Parent=gene-HMPREF7215_2195;Dbxref=NCBI_GP:EFB91381.1;Name=EFB91381.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2195;product=hypothetical protein;protein_id=EFB91381.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank binding_site 22593 22702 . + . ID=id-ADFP01000044.1:22593..22702;Note=TPP riboswitch (THI element)%3B Rfam score 63.19;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 GCA_000177335.1|ADFP01000044.1 Genbank gene 22742 23245 . + . ID=gene-HMPREF7215_2197;Name=HMPREF7215_2197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2197 GCA_000177335.1|ADFP01000044.1 Genbank CDS 22742 23245 . + 0 ID=cds-EFB91382.1;Parent=gene-HMPREF7215_2197;Dbxref=NCBI_GP:EFB91382.1;Name=EFB91382.1;Note=identified by match to protein family HMM PF09515%3B match to protein family HMM TIGR02357;gbkey=CDS;locus_tag=HMPREF7215_2197;product=putative proton-coupled thiamine transporter YuaJ;protein_id=EFB91382.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 23267 24295 . + . ID=gene-HMPREF7215_2198;Name=HMPREF7215_2198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2198 GCA_000177335.1|ADFP01000044.1 Genbank CDS 23267 24295 . + 0 ID=cds-EFB91383.1;Parent=gene-HMPREF7215_2198;Dbxref=NCBI_GP:EFB91383.1;Name=EFB91383.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2198;product=hypothetical protein;protein_id=EFB91383.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 24446 25675 . + . ID=gene-HMPREF7215_2199;Name=HMPREF7215_2199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2199 GCA_000177335.1|ADFP01000044.1 Genbank CDS 24446 25675 . + 0 ID=cds-EFB91384.1;Parent=gene-HMPREF7215_2199;Dbxref=NCBI_GP:EFB91384.1;Name=EFB91384.1;gbkey=CDS;locus_tag=HMPREF7215_2199;product=hypothetical protein;protein_id=EFB91384.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 25700 26431 . + . ID=gene-HMPREF7215_2200;Name=HMPREF7215_2200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2200 GCA_000177335.1|ADFP01000044.1 Genbank CDS 25700 26431 . + 0 ID=cds-EFB91385.1;Parent=gene-HMPREF7215_2200;Dbxref=NCBI_GP:EFB91385.1;Name=EFB91385.1;Note=identified by match to protein family HMM PF04488;gbkey=CDS;locus_tag=HMPREF7215_2200;product=hypothetical protein;protein_id=EFB91385.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 26471 27637 . - . ID=gene-HMPREF7215_2201;Name=HMPREF7215_2201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2201 GCA_000177335.1|ADFP01000044.1 Genbank CDS 26471 27637 . - 0 ID=cds-EFB91386.1;Parent=gene-HMPREF7215_2201;Dbxref=NCBI_GP:EFB91386.1;Name=EFB91386.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=HMPREF7215_2201;product=glycosyltransferase%2C group 1 family protein;protein_id=EFB91386.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 27634 28506 . - . ID=gene-HMPREF7215_2202;Name=HMPREF7215_2202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2202 GCA_000177335.1|ADFP01000044.1 Genbank CDS 27634 28506 . - 0 ID=cds-EFB91387.1;Parent=gene-HMPREF7215_2202;Dbxref=NCBI_GP:EFB91387.1;Name=EFB91387.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370;gbkey=CDS;locus_tag=HMPREF7215_2202;product=NAD dependent epimerase/dehydratase family protein;protein_id=EFB91387.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 28503 29207 . - . ID=gene-HMPREF7215_2203;Name=HMPREF7215_2203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2203 GCA_000177335.1|ADFP01000044.1 Genbank CDS 28503 29207 . - 0 ID=cds-EFB91388.1;Parent=gene-HMPREF7215_2203;Dbxref=NCBI_GP:EFB91388.1;Name=EFB91388.1;Note=identified by match to protein family HMM PF02397;gbkey=CDS;locus_tag=HMPREF7215_2203;product=bacterial sugar transferase;protein_id=EFB91388.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 29332 31482 . + . ID=gene-HMPREF7215_2204;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2204 GCA_000177335.1|ADFP01000044.1 Genbank CDS 29332 31482 . + 0 ID=cds-EFB91389.1;Parent=gene-HMPREF7215_2204;Dbxref=NCBI_GP:EFB91389.1;Name=EFB91389.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;gene=uvrD;locus_tag=HMPREF7215_2204;product=UvrD/REP helicase;protein_id=EFB91389.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 31561 31830 . - . ID=gene-HMPREF7215_2205;Name=HMPREF7215_2205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2205 GCA_000177335.1|ADFP01000044.1 Genbank CDS 31561 31830 . - 0 ID=cds-EFB91390.1;Parent=gene-HMPREF7215_2205;Dbxref=NCBI_GP:EFB91390.1;Name=EFB91390.1;gbkey=CDS;locus_tag=HMPREF7215_2205;product=hypothetical protein;protein_id=EFB91390.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 31949 32461 . - . ID=gene-HMPREF7215_2206;Name=HMPREF7215_2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2206 GCA_000177335.1|ADFP01000044.1 Genbank CDS 31949 32461 . - 0 ID=cds-EFB91391.1;Parent=gene-HMPREF7215_2206;Dbxref=NCBI_GP:EFB91391.1;Name=EFB91391.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534;gbkey=CDS;locus_tag=HMPREF7215_2206;product=redoxin family protein;protein_id=EFB91391.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 32677 33396 . + . ID=gene-HMPREF7215_2207;Name=HMPREF7215_2207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2207 GCA_000177335.1|ADFP01000044.1 Genbank CDS 32677 33396 . + 0 ID=cds-EFB91392.1;Parent=gene-HMPREF7215_2207;Dbxref=NCBI_GP:EFB91392.1;Name=EFB91392.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2207;product=hypothetical protein;protein_id=EFB91392.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 33450 33605 . + . ID=gene-HMPREF7215_2209;Name=HMPREF7215_2209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2209 GCA_000177335.1|ADFP01000044.1 Genbank CDS 33450 33605 . + 0 ID=cds-EFB91393.1;Parent=gene-HMPREF7215_2209;Dbxref=NCBI_GP:EFB91393.1;Name=EFB91393.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2209;product=hypothetical protein;protein_id=EFB91393.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 33586 34341 . - . ID=gene-HMPREF7215_2208;Name=HMPREF7215_2208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2208 GCA_000177335.1|ADFP01000044.1 Genbank CDS 33586 34341 . - 0 ID=cds-EFB91394.1;Parent=gene-HMPREF7215_2208;Dbxref=NCBI_GP:EFB91394.1;Name=EFB91394.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2208;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91394.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 34338 35213 . - . ID=gene-HMPREF7215_2210;Name=HMPREF7215_2210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2210 GCA_000177335.1|ADFP01000044.1 Genbank CDS 34338 35213 . - 0 ID=cds-EFB91395.1;Parent=gene-HMPREF7215_2210;Dbxref=NCBI_GP:EFB91395.1;Name=EFB91395.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2210;product=ABC transporter%2C permease protein;protein_id=EFB91395.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 35210 36058 . - . ID=gene-HMPREF7215_2211;Name=HMPREF7215_2211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2211 GCA_000177335.1|ADFP01000044.1 Genbank CDS 35210 36058 . - 0 ID=cds-EFB91396.1;Parent=gene-HMPREF7215_2211;Dbxref=NCBI_GP:EFB91396.1;Name=EFB91396.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2211;product=ABC transporter%2C permease protein;protein_id=EFB91396.1;transl_table=11 GCA_000177335.1|ADFP01000044.1 Genbank gene 36197 37027 . - . ID=gene-HMPREF7215_2212;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2212 GCA_000177335.1|ADFP01000044.1 Genbank CDS 36197 37027 . - 0 ID=cds-EFB91397.1;Parent=gene-HMPREF7215_2212;Dbxref=NCBI_GP:EFB91397.1;Name=EFB91397.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136;gbkey=CDS;gene=pstS;locus_tag=HMPREF7215_2212;product=phosphate binding protein;protein_id=EFB91397.1;transl_table=11 ##sequence-region ADFP01000043.1 1 12393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000043.1 Genbank region 1 12393 . + . ID=ADFP01000043.1:1..12393;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000043.1 Genbank gene 68 1252 . - . ID=gene-HMPREF7215_0457;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=HMPREF7215_0457 GCA_000177335.1|ADFP01000043.1 Genbank CDS 68 1252 . - 0 ID=cds-EFB91398.1;Parent=gene-HMPREF7215_0457;Dbxref=NCBI_GP:EFB91398.1;Name=EFB91398.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034;gbkey=CDS;gene=metK;locus_tag=HMPREF7215_0457;product=methionine adenosyltransferase;protein_id=EFB91398.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 1292 1510 . + . ID=gene-HMPREF7215_0459;Name=HMPREF7215_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0459 GCA_000177335.1|ADFP01000043.1 Genbank CDS 1292 1510 . + 0 ID=cds-EFB91399.1;Parent=gene-HMPREF7215_0459;Dbxref=NCBI_GP:EFB91399.1;Name=EFB91399.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0459;product=hypothetical protein;protein_id=EFB91399.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank binding_site 1361 1479 . - . ID=id-ADFP01000043.1:1361..1479;Note=SAM riboswitch (S box leader)%3B Rfam score 48.08;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162 GCA_000177335.1|ADFP01000043.1 Genbank gene 1571 1726 . + . ID=gene-HMPREF7215_0460;Name=HMPREF7215_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0460 GCA_000177335.1|ADFP01000043.1 Genbank CDS 1571 1726 . + 0 ID=cds-EFB91400.1;Parent=gene-HMPREF7215_0460;Dbxref=NCBI_GP:EFB91400.1;Name=EFB91400.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0460;product=hypothetical protein;protein_id=EFB91400.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 1735 1998 . - . ID=gene-HMPREF7215_0461;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0461 GCA_000177335.1|ADFP01000043.1 Genbank CDS 1735 1998 . - 0 ID=cds-EFB91401.1;Parent=gene-HMPREF7215_0461;Dbxref=NCBI_GP:EFB91401.1;Name=EFB91401.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC;locus_tag=HMPREF7215_0461;product=preprotein translocase%2C YajC subunit;protein_id=EFB91401.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 2014 3198 . - . ID=gene-HMPREF7215_0462;Name=HMPREF7215_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0462 GCA_000177335.1|ADFP01000043.1 Genbank CDS 2014 3198 . - 0 ID=cds-EFB91402.1;Parent=gene-HMPREF7215_0462;Dbxref=NCBI_GP:EFB91402.1;Name=EFB91402.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_0462;product=amidohydrolase;protein_id=EFB91402.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 3329 3985 . - . ID=gene-HMPREF7215_0463;Name=HMPREF7215_0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0463 GCA_000177335.1|ADFP01000043.1 Genbank CDS 3329 3985 . - 0 ID=cds-EFB91403.1;Parent=gene-HMPREF7215_0463;Dbxref=NCBI_GP:EFB91403.1;Name=EFB91403.1;gbkey=CDS;locus_tag=HMPREF7215_0463;product=hypothetical protein;protein_id=EFB91403.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 4013 4732 . - . ID=gene-HMPREF7215_0464;Name=HMPREF7215_0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0464 GCA_000177335.1|ADFP01000043.1 Genbank CDS 4013 4732 . - 0 ID=cds-EFB91404.1;Parent=gene-HMPREF7215_0464;Dbxref=NCBI_GP:EFB91404.1;Name=EFB91404.1;gbkey=CDS;locus_tag=HMPREF7215_0464;product=hypothetical protein;protein_id=EFB91404.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 5096 6706 . - . ID=gene-HMPREF7215_0465;Name=HMPREF7215_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0465 GCA_000177335.1|ADFP01000043.1 Genbank CDS 5096 6706 . - 0 ID=cds-EFB91405.1;Parent=gene-HMPREF7215_0465;Dbxref=NCBI_GP:EFB91405.1;Name=EFB91405.1;Note=identified by match to protein family HMM PF07905;gbkey=CDS;locus_tag=HMPREF7215_0465;product=purine catabolism regulatory protein-like family;protein_id=EFB91405.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 6773 6895 . + . ID=gene-HMPREF7215_0466;Name=HMPREF7215_0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0466 GCA_000177335.1|ADFP01000043.1 Genbank CDS 6773 6895 . + 0 ID=cds-EFB91406.1;Parent=gene-HMPREF7215_0466;Dbxref=NCBI_GP:EFB91406.1;Name=EFB91406.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0466;product=hypothetical protein;protein_id=EFB91406.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 6937 10092 . + . ID=gene-HMPREF7215_0467;Name=HMPREF7215_0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0467 GCA_000177335.1|ADFP01000043.1 Genbank CDS 6937 10092 . + 0 ID=cds-EFB91407.1;Parent=gene-HMPREF7215_0467;Dbxref=NCBI_GP:EFB91407.1;Name=EFB91407.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0467;product=ankyrin repeat protein;protein_id=EFB91407.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 10175 10924 . - . ID=gene-HMPREF7215_0468;Name=HMPREF7215_0468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0468 GCA_000177335.1|ADFP01000043.1 Genbank CDS 10175 10924 . - 0 ID=cds-EFB91408.1;Parent=gene-HMPREF7215_0468;Dbxref=NCBI_GP:EFB91408.1;Name=EFB91408.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF7215_0468;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFB91408.1;transl_table=11 GCA_000177335.1|ADFP01000043.1 Genbank gene 11084 12328 . + . ID=gene-HMPREF7215_0469;Name=HMPREF7215_0469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0469 GCA_000177335.1|ADFP01000043.1 Genbank CDS 11084 12328 . + 0 ID=cds-EFB91409.1;Parent=gene-HMPREF7215_0469;Dbxref=NCBI_GP:EFB91409.1;Name=EFB91409.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01743;gbkey=CDS;locus_tag=HMPREF7215_0469;product=tRNA nucleotidyltransferase/poly(A) polymerase family protein;protein_id=EFB91409.1;transl_table=11 ##sequence-region ADFP01000042.1 1 819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000042.1 Genbank region 1 819 . + . ID=ADFP01000042.1:1..819;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000042.1 Genbank pseudogene 1 819 . - . ID=gene-HMPREF7215_0001;Name=HMPREF7215_0001;Note=beta-lactamase domain protein%3B this region was identified as a potential CDS%3B identified by match to protein family HMM PF00753;end_range=819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF7215_0001;partial=true;pseudo=true;start_range=.,1 ##sequence-region ADFP01000041.1 1 14905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000041.1 Genbank region 1 14905 . + . ID=ADFP01000041.1:1..14905;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000041.1 Genbank gene 149 1036 . + . ID=gene-HMPREF7215_2523;Name=HMPREF7215_2523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2523 GCA_000177335.1|ADFP01000041.1 Genbank CDS 149 1036 . + 0 ID=cds-EFB91410.1;Parent=gene-HMPREF7215_2523;Dbxref=NCBI_GP:EFB91410.1;Name=EFB91410.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2523;product=hypothetical protein;protein_id=EFB91410.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 994 1113 . - . ID=gene-HMPREF7215_2522;Name=HMPREF7215_2522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2522 GCA_000177335.1|ADFP01000041.1 Genbank CDS 994 1113 . - 0 ID=cds-EFB91411.1;Parent=gene-HMPREF7215_2522;Dbxref=NCBI_GP:EFB91411.1;Name=EFB91411.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2522;product=hypothetical protein;protein_id=EFB91411.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 1127 1885 . - . ID=gene-HMPREF7215_2524;Name=HMPREF7215_2524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2524 GCA_000177335.1|ADFP01000041.1 Genbank CDS 1127 1885 . - 0 ID=cds-EFB91412.1;Parent=gene-HMPREF7215_2524;Dbxref=NCBI_GP:EFB91412.1;Name=EFB91412.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;locus_tag=HMPREF7215_2524;product=transcriptional regulator%2C Sir2 family;protein_id=EFB91412.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 1931 2245 . - . ID=gene-HMPREF7215_2525;Name=HMPREF7215_2525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2525 GCA_000177335.1|ADFP01000041.1 Genbank CDS 1931 2245 . - 0 ID=cds-EFB91413.1;Parent=gene-HMPREF7215_2525;Dbxref=NCBI_GP:EFB91413.1;Name=EFB91413.1;Note=identified by match to protein family HMM PF04993;gbkey=CDS;locus_tag=HMPREF7215_2525;product=TfoX N-terminal domain protein;protein_id=EFB91413.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 2256 2564 . - . ID=gene-HMPREF7215_2526;Name=HMPREF7215_2526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2526 GCA_000177335.1|ADFP01000041.1 Genbank CDS 2256 2564 . - 0 ID=cds-EFB91414.1;Parent=gene-HMPREF7215_2526;Dbxref=NCBI_GP:EFB91414.1;Name=EFB91414.1;Note=identified by match to protein family HMM PF01541;gbkey=CDS;locus_tag=HMPREF7215_2526;product=GIY-YIG catalytic domain protein;protein_id=EFB91414.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 2561 3793 . - . ID=gene-HMPREF7215_2527;Name=HMPREF7215_2527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2527 GCA_000177335.1|ADFP01000041.1 Genbank CDS 2561 3793 . - 0 ID=cds-EFB91415.1;Parent=gene-HMPREF7215_2527;Dbxref=NCBI_GP:EFB91415.1;Name=EFB91415.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF7215_2527;product=transporter%2C major facilitator family protein;protein_id=EFB91415.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 3792 3908 . + . ID=gene-HMPREF7215_2529;Name=HMPREF7215_2529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2529 GCA_000177335.1|ADFP01000041.1 Genbank CDS 3792 3908 . + 0 ID=cds-EFB91416.1;Parent=gene-HMPREF7215_2529;Dbxref=NCBI_GP:EFB91416.1;Name=EFB91416.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2529;product=hypothetical protein;protein_id=EFB91416.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 3873 3992 . - . ID=gene-HMPREF7215_2528;Name=HMPREF7215_2528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2528 GCA_000177335.1|ADFP01000041.1 Genbank CDS 3873 3992 . - 0 ID=cds-EFB91417.1;Parent=gene-HMPREF7215_2528;Dbxref=NCBI_GP:EFB91417.1;Name=EFB91417.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2528;product=hypothetical protein;protein_id=EFB91417.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 3998 4540 . + . ID=gene-HMPREF7215_2530;Name=HMPREF7215_2530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2530 GCA_000177335.1|ADFP01000041.1 Genbank CDS 3998 4540 . + 0 ID=cds-EFB91418.1;Parent=gene-HMPREF7215_2530;Dbxref=NCBI_GP:EFB91418.1;Name=EFB91418.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=HMPREF7215_2530;product=cytidine and deoxycytidylate deaminase zinc-binding region;protein_id=EFB91418.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 4531 6315 . + . ID=gene-HMPREF7215_2531;Name=HMPREF7215_2531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2531 GCA_000177335.1|ADFP01000041.1 Genbank CDS 4531 6315 . + 0 ID=cds-EFB91419.1;Parent=gene-HMPREF7215_2531;Dbxref=NCBI_GP:EFB91419.1;Name=EFB91419.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521;gbkey=CDS;locus_tag=HMPREF7215_2531;product=metallo-beta-lactamase domain protein;protein_id=EFB91419.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 6347 8086 . + . ID=gene-HMPREF7215_2532;Name=HMPREF7215_2532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2532 GCA_000177335.1|ADFP01000041.1 Genbank CDS 6347 8086 . + 0 ID=cds-EFB91420.1;Parent=gene-HMPREF7215_2532;Dbxref=NCBI_GP:EFB91420.1;Name=EFB91420.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;locus_tag=HMPREF7215_2532;product=5'-nucleotidase%2C C-terminal domain protein;protein_id=EFB91420.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 8321 9460 . - . ID=gene-HMPREF7215_2533;Name=HMPREF7215_2533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2533 GCA_000177335.1|ADFP01000041.1 Genbank CDS 8321 9460 . - 0 ID=cds-EFB91421.1;Parent=gene-HMPREF7215_2533;Dbxref=NCBI_GP:EFB91421.1;Name=EFB91421.1;Note=identified by match to protein family HMM PF03060;gbkey=CDS;locus_tag=HMPREF7215_2533;product=oxidoreductase%2C 2-nitropropane dioxygenase family protein;protein_id=EFB91421.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 9642 10763 . - . ID=gene-HMPREF7215_2534;Name=HMPREF7215_2534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2534 GCA_000177335.1|ADFP01000041.1 Genbank CDS 9642 10763 . - 0 ID=cds-EFB91422.1;Parent=gene-HMPREF7215_2534;Dbxref=NCBI_GP:EFB91422.1;Name=EFB91422.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF7215_2534;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFB91422.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 10962 11342 . + . ID=gene-HMPREF7215_2535;Name=HMPREF7215_2535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2535 GCA_000177335.1|ADFP01000041.1 Genbank CDS 10962 11342 . + 0 ID=cds-EFB91423.1;Parent=gene-HMPREF7215_2535;Dbxref=NCBI_GP:EFB91423.1;Name=EFB91423.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;locus_tag=HMPREF7215_2535;product=transcriptional regulator%2C ArsR family;protein_id=EFB91423.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 11366 12022 . + . ID=gene-HMPREF7215_2536;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=HMPREF7215_2536 GCA_000177335.1|ADFP01000041.1 Genbank CDS 11366 12022 . + 0 ID=cds-EFB91424.1;Parent=gene-HMPREF7215_2536;Dbxref=NCBI_GP:EFB91424.1;Name=EFB91424.1;Note=identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011;gbkey=CDS;gene=ybaK;locus_tag=HMPREF7215_2536;product=YbaK/EbsC protein;protein_id=EFB91424.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 12016 12312 . + . ID=gene-HMPREF7215_2537;Name=HMPREF7215_2537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2537 GCA_000177335.1|ADFP01000041.1 Genbank CDS 12016 12312 . + 0 ID=cds-EFB91425.1;Parent=gene-HMPREF7215_2537;Dbxref=NCBI_GP:EFB91425.1;Name=EFB91425.1;Note=identified by match to protein family HMM PF06961;gbkey=CDS;locus_tag=HMPREF7215_2537;product=hypothetical protein;protein_id=EFB91425.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 12322 12744 . + . ID=gene-HMPREF7215_2538;Name=HMPREF7215_2538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2538 GCA_000177335.1|ADFP01000041.1 Genbank CDS 12322 12744 . + 0 ID=cds-EFB91426.1;Parent=gene-HMPREF7215_2538;Dbxref=NCBI_GP:EFB91426.1;Name=EFB91426.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051;gbkey=CDS;locus_tag=HMPREF7215_2538;product=acyl-CoA thioester hydrolase%2C YbgC/YbaW family;protein_id=EFB91426.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 12809 13537 . + . ID=gene-HMPREF7215_2539;Name=HMPREF7215_2539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2539 GCA_000177335.1|ADFP01000041.1 Genbank CDS 12809 13537 . + 0 ID=cds-EFB91427.1;Parent=gene-HMPREF7215_2539;Dbxref=NCBI_GP:EFB91427.1;Name=EFB91427.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722;gbkey=CDS;locus_tag=HMPREF7215_2539;product=peptidase C26;protein_id=EFB91427.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 13639 13770 . - . ID=gene-HMPREF7215_2540;Name=HMPREF7215_2540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2540 GCA_000177335.1|ADFP01000041.1 Genbank CDS 13639 13770 . - 0 ID=cds-EFB91428.1;Parent=gene-HMPREF7215_2540;Dbxref=NCBI_GP:EFB91428.1;Name=EFB91428.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2540;product=hypothetical protein;protein_id=EFB91428.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 13767 14441 . - . ID=gene-HMPREF7215_2541;Name=HMPREF7215_2541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2541 GCA_000177335.1|ADFP01000041.1 Genbank CDS 13767 14441 . - 0 ID=cds-EFB91429.1;Parent=gene-HMPREF7215_2541;Dbxref=NCBI_GP:EFB91429.1;Name=EFB91429.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;locus_tag=HMPREF7215_2541;product=cyclic nucleotide-binding domain protein;protein_id=EFB91429.1;transl_table=11 GCA_000177335.1|ADFP01000041.1 Genbank gene 14570 14905 . + . ID=gene-HMPREF7215_2542;Name=HMPREF7215_2542;end_range=14905,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2542;partial=true GCA_000177335.1|ADFP01000041.1 Genbank CDS 14570 14905 . + 0 ID=cds-EFB91430.1;Parent=gene-HMPREF7215_2542;Dbxref=NCBI_GP:EFB91430.1;Name=EFB91430.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00037;end_range=14905,.;gbkey=CDS;locus_tag=HMPREF7215_2542;partial=true;product=4Fe-4S binding domain protein;protein_id=EFB91430.1;transl_table=11 ##sequence-region ADFP01000040.1 1 3291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000040.1 Genbank region 1 3291 . + . ID=ADFP01000040.1:1..3291;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000040.1 Genbank gene 1 109 . - . ID=gene-HMPREF7215_2832;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF7215_2832 GCA_000177335.1|ADFP01000040.1 Genbank rRNA 1 109 . - . ID=rna-HMPREF7215_2832;Parent=gene-HMPREF7215_2832;gbkey=rRNA;gene=rrf;locus_tag=HMPREF7215_2832;product=5S ribosomal RNA GCA_000177335.1|ADFP01000040.1 Genbank exon 1 109 . - . ID=exon-HMPREF7215_2832-1;Parent=rna-HMPREF7215_2832;gbkey=rRNA;gene=rrf;locus_tag=HMPREF7215_2832;product=5S ribosomal RNA GCA_000177335.1|ADFP01000040.1 Genbank gene 284 3257 . - . ID=gene-HMPREF7215_2834;Name=rrl;gbkey=Gene;gene=rrl;gene_biotype=rRNA;locus_tag=HMPREF7215_2834 GCA_000177335.1|ADFP01000040.1 Genbank rRNA 284 3257 . - . ID=rna-HMPREF7215_2834;Parent=gene-HMPREF7215_2834;gbkey=rRNA;gene=rrl;locus_tag=HMPREF7215_2834;product=23S ribosomal RNA GCA_000177335.1|ADFP01000040.1 Genbank exon 284 3257 . - . ID=exon-HMPREF7215_2834-1;Parent=rna-HMPREF7215_2834;gbkey=rRNA;gene=rrl;locus_tag=HMPREF7215_2834;product=23S ribosomal RNA ##sequence-region ADFP01000039.1 1 58328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000039.1 Genbank region 1 58328 . + . ID=ADFP01000039.1:1..58328;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000039.1 Genbank gene 1 810 . + . ID=gene-HMPREF7215_1516;Name=HMPREF7215_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1516;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000039.1 Genbank CDS 1 810 . + 0 ID=cds-EFB91431.1;Parent=gene-HMPREF7215_1516;Dbxref=NCBI_GP:EFB91431.1;Name=EFB91431.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02626;gbkey=CDS;locus_tag=HMPREF7215_1516;partial=true;product=allophanate hydrolase subunit 2;protein_id=EFB91431.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 827 1597 . + . ID=gene-HMPREF7215_1517;Name=HMPREF7215_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1517 GCA_000177335.1|ADFP01000039.1 Genbank CDS 827 1597 . + 0 ID=cds-EFB91432.1;Parent=gene-HMPREF7215_1517;Dbxref=NCBI_GP:EFB91432.1;Name=EFB91432.1;Note=identified by match to protein family HMM PF03746;gbkey=CDS;locus_tag=HMPREF7215_1517;product=LamB/YcsF family protein;protein_id=EFB91432.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 1812 2405 . - . ID=gene-HMPREF7215_1518;Name=HMPREF7215_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1518 GCA_000177335.1|ADFP01000039.1 Genbank CDS 1812 2405 . - 0 ID=cds-EFB91433.1;Parent=gene-HMPREF7215_1518;Dbxref=NCBI_GP:EFB91433.1;Name=EFB91433.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF7215_1518;product=indolepyruvate oxidoreductase subunit beta;protein_id=EFB91433.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 2402 4192 . - . ID=gene-HMPREF7215_1519;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1519 GCA_000177335.1|ADFP01000039.1 Genbank CDS 2402 4192 . - 0 ID=cds-EFB91434.1;Parent=gene-HMPREF7215_1519;Dbxref=NCBI_GP:EFB91434.1;Name=EFB91434.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01855%3B match to protein family HMM PF02775%3B match to protein family HMM TIGR03336;gbkey=CDS;gene=iorA;locus_tag=HMPREF7215_1519;product=indolepyruvate ferredoxin oxidoreductase%2C alpha subunit;protein_id=EFB91434.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 4224 5123 . - . ID=gene-HMPREF7215_1520;Name=HMPREF7215_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1520 GCA_000177335.1|ADFP01000039.1 Genbank CDS 4224 5123 . - 0 ID=cds-EFB91435.1;Parent=gene-HMPREF7215_1520;Dbxref=NCBI_GP:EFB91435.1;Name=EFB91435.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1520;product=LysR substrate binding domain protein;protein_id=EFB91435.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 5196 6473 . - . ID=gene-HMPREF7215_1521;Name=HMPREF7215_1521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1521 GCA_000177335.1|ADFP01000039.1 Genbank CDS 5196 6473 . - 0 ID=cds-EFB91436.1;Parent=gene-HMPREF7215_1521;Dbxref=NCBI_GP:EFB91436.1;Name=EFB91436.1;Note=identified by match to protein family HMM PF03600%3B match to protein family HMM PF07158;gbkey=CDS;locus_tag=HMPREF7215_1521;product=dicarboxylate carrier MatC domain protein;protein_id=EFB91436.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 6490 7392 . - . ID=gene-HMPREF7215_1522;Name=HMPREF7215_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1522 GCA_000177335.1|ADFP01000039.1 Genbank CDS 6490 7392 . - 0 ID=cds-EFB91437.1;Parent=gene-HMPREF7215_1522;Dbxref=NCBI_GP:EFB91437.1;Name=EFB91437.1;Note=identified by match to protein family HMM PF00682;gbkey=CDS;locus_tag=HMPREF7215_1522;product=HMGL-like protein;protein_id=EFB91437.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 7406 8629 . - . ID=gene-HMPREF7215_1523;Name=HMPREF7215_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1523 GCA_000177335.1|ADFP01000039.1 Genbank CDS 7406 8629 . - 0 ID=cds-EFB91438.1;Parent=gene-HMPREF7215_1523;Dbxref=NCBI_GP:EFB91438.1;Name=EFB91438.1;Note=identified by match to protein family HMM PF02515;gbkey=CDS;locus_tag=HMPREF7215_1523;product=CoA-transferase family III protein;protein_id=EFB91438.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 8955 9071 . - . ID=gene-HMPREF7215_1524;Name=HMPREF7215_1524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1524 GCA_000177335.1|ADFP01000039.1 Genbank CDS 8955 9071 . - 0 ID=cds-EFB91439.1;Parent=gene-HMPREF7215_1524;Dbxref=NCBI_GP:EFB91439.1;Name=EFB91439.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1524;product=hypothetical protein;protein_id=EFB91439.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 9154 9924 . + . ID=gene-HMPREF7215_1525;Name=HMPREF7215_1525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1525 GCA_000177335.1|ADFP01000039.1 Genbank CDS 9154 9924 . + 0 ID=cds-EFB91440.1;Parent=gene-HMPREF7215_1525;Dbxref=NCBI_GP:EFB91440.1;Name=EFB91440.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;locus_tag=HMPREF7215_1525;product=putative CoA-substrate-specific enzyme activase;protein_id=EFB91440.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 9921 11063 . + . ID=gene-HMPREF7215_1526;Name=HMPREF7215_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1526 GCA_000177335.1|ADFP01000039.1 Genbank CDS 9921 11063 . + 0 ID=cds-EFB91441.1;Parent=gene-HMPREF7215_1526;Dbxref=NCBI_GP:EFB91441.1;Name=EFB91441.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;locus_tag=HMPREF7215_1526;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EFB91441.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 11060 11176 . + . ID=gene-HMPREF7215_1527;Name=HMPREF7215_1527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1527 GCA_000177335.1|ADFP01000039.1 Genbank CDS 11060 11176 . + 0 ID=cds-EFB91442.1;Parent=gene-HMPREF7215_1527;Dbxref=NCBI_GP:EFB91442.1;Name=EFB91442.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1527;product=hypothetical protein;protein_id=EFB91442.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 11173 12168 . + . ID=gene-HMPREF7215_1528;Name=HMPREF7215_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1528 GCA_000177335.1|ADFP01000039.1 Genbank CDS 11173 12168 . + 0 ID=cds-EFB91443.1;Parent=gene-HMPREF7215_1528;Dbxref=NCBI_GP:EFB91443.1;Name=EFB91443.1;Note=identified by match to protein family HMM PF03797;gbkey=CDS;locus_tag=HMPREF7215_1528;product=autotransporter beta-domain protein;protein_id=EFB91443.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 12304 12681 . - . ID=gene-HMPREF7215_1529;Name=HMPREF7215_1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1529 GCA_000177335.1|ADFP01000039.1 Genbank CDS 12304 12681 . - 0 ID=cds-EFB91444.1;Parent=gene-HMPREF7215_1529;Dbxref=NCBI_GP:EFB91444.1;Name=EFB91444.1;Note=identified by match to protein family HMM PF04343;gbkey=CDS;locus_tag=HMPREF7215_1529;product=hypothetical protein;protein_id=EFB91444.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 12780 13280 . + . ID=gene-HMPREF7215_1530;Name=HMPREF7215_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1530 GCA_000177335.1|ADFP01000039.1 Genbank CDS 12780 13280 . + 0 ID=cds-EFB91445.1;Parent=gene-HMPREF7215_1530;Dbxref=NCBI_GP:EFB91445.1;Name=EFB91445.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF7215_1530;product=hydrolase%2C NUDIX family;protein_id=EFB91445.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 13273 13947 . + . ID=gene-HMPREF7215_1531;Name=HMPREF7215_1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1531 GCA_000177335.1|ADFP01000039.1 Genbank CDS 13273 13947 . + 0 ID=cds-EFB91446.1;Parent=gene-HMPREF7215_1531;Dbxref=NCBI_GP:EFB91446.1;Name=EFB91446.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;locus_tag=HMPREF7215_1531;product=HAD hydrolase%2C family IA%2C variant 3;protein_id=EFB91446.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 14253 14693 . + . ID=gene-HMPREF7215_1532;Name=HMPREF7215_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1532 GCA_000177335.1|ADFP01000039.1 Genbank CDS 14253 14693 . + 0 ID=cds-EFB91447.1;Parent=gene-HMPREF7215_1532;Dbxref=NCBI_GP:EFB91447.1;Name=EFB91447.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;locus_tag=HMPREF7215_1532;product=ferritin-like protein;protein_id=EFB91447.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 14713 15132 . + . ID=gene-HMPREF7215_1533;Name=HMPREF7215_1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1533 GCA_000177335.1|ADFP01000039.1 Genbank CDS 14713 15132 . + 0 ID=cds-EFB91448.1;Parent=gene-HMPREF7215_1533;Dbxref=NCBI_GP:EFB91448.1;Name=EFB91448.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF7215_1533;product=transcriptional regulator%2C Fur family;protein_id=EFB91448.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 15364 15687 . + . ID=gene-HMPREF7215_1534;Name=HMPREF7215_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1534 GCA_000177335.1|ADFP01000039.1 Genbank CDS 15364 15687 . + 0 ID=cds-EFB91449.1;Parent=gene-HMPREF7215_1534;Dbxref=NCBI_GP:EFB91449.1;Name=EFB91449.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;locus_tag=HMPREF7215_1534;product=prevent-host-death family protein;protein_id=EFB91449.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 15684 16013 . + . ID=gene-HMPREF7215_1535;Name=HMPREF7215_1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1535 GCA_000177335.1|ADFP01000039.1 Genbank CDS 15684 16013 . + 0 ID=cds-EFB91450.1;Parent=gene-HMPREF7215_1535;Dbxref=NCBI_GP:EFB91450.1;Name=EFB91450.1;Note=identified by match to protein family HMM PF05016;gbkey=CDS;locus_tag=HMPREF7215_1535;product=toxin-antitoxin system%2C toxin component%2C RelE family;protein_id=EFB91450.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 16092 17471 . - . ID=gene-HMPREF7215_1536;Name=HMPREF7215_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1536 GCA_000177335.1|ADFP01000039.1 Genbank CDS 16092 17471 . - 0 ID=cds-EFB91451.1;Parent=gene-HMPREF7215_1536;Dbxref=NCBI_GP:EFB91451.1;Name=EFB91451.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_1536;product=MATE efflux family protein;protein_id=EFB91451.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 17564 17746 . + . ID=gene-HMPREF7215_1537;Name=HMPREF7215_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1537 GCA_000177335.1|ADFP01000039.1 Genbank CDS 17564 17746 . + 0 ID=cds-EFB91452.1;Parent=gene-HMPREF7215_1537;Dbxref=NCBI_GP:EFB91452.1;Name=EFB91452.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1537;product=hypothetical protein;protein_id=EFB91452.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 17963 18175 . + . ID=gene-HMPREF7215_1538;Name=HMPREF7215_1538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1538 GCA_000177335.1|ADFP01000039.1 Genbank CDS 17963 18175 . + 0 ID=cds-EFB91453.1;Parent=gene-HMPREF7215_1538;Dbxref=NCBI_GP:EFB91453.1;Name=EFB91453.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1538;product=hypothetical protein;protein_id=EFB91453.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 18172 20070 . + . ID=gene-HMPREF7215_1539;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1539 GCA_000177335.1|ADFP01000039.1 Genbank CDS 18172 20070 . + 0 ID=cds-EFB91454.1;Parent=gene-HMPREF7215_1539;Dbxref=NCBI_GP:EFB91454.1;Name=EFB91454.1;Note=identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;locus_tag=HMPREF7215_1539;product=DNA gyrase%2C B subunit;protein_id=EFB91454.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 20364 20486 . - . ID=gene-HMPREF7215_1540;Name=HMPREF7215_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1540 GCA_000177335.1|ADFP01000039.1 Genbank CDS 20364 20486 . - 0 ID=cds-EFB91455.1;Parent=gene-HMPREF7215_1540;Dbxref=NCBI_GP:EFB91455.1;Name=EFB91455.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1540;product=hypothetical protein;protein_id=EFB91455.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 20456 21274 . - . ID=gene-HMPREF7215_1541;Name=fnt;gbkey=Gene;gene=fnt;gene_biotype=protein_coding;locus_tag=HMPREF7215_1541 GCA_000177335.1|ADFP01000039.1 Genbank CDS 20456 21274 . - 0 ID=cds-EFB91456.1;Parent=gene-HMPREF7215_1541;Dbxref=NCBI_GP:EFB91456.1;Name=EFB91456.1;Note=identified by match to protein family HMM PF01226;gbkey=CDS;gene=fnt;locus_tag=HMPREF7215_1541;product=formate/nitrite transporter;protein_id=EFB91456.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 21599 21781 . - . ID=gene-HMPREF7215_1542;Name=HMPREF7215_1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1542 GCA_000177335.1|ADFP01000039.1 Genbank CDS 21599 21781 . - 0 ID=cds-EFB91457.1;Parent=gene-HMPREF7215_1542;Dbxref=NCBI_GP:EFB91457.1;Name=EFB91457.1;Note=2.1.2.1;gbkey=CDS;locus_tag=HMPREF7215_1542;product=hypothetical protein;protein_id=EFB91457.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 21911 22405 . - . ID=gene-HMPREF7215_1543;Name=HMPREF7215_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1543 GCA_000177335.1|ADFP01000039.1 Genbank CDS 21911 22405 . - 0 ID=cds-EFB91458.1;Parent=gene-HMPREF7215_1543;Dbxref=NCBI_GP:EFB91458.1;Name=EFB91458.1;gbkey=CDS;locus_tag=HMPREF7215_1543;product=hypothetical protein;protein_id=EFB91458.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 22578 24068 . - . ID=gene-HMPREF7215_1544;Name=cobQ;gbkey=Gene;gene=cobQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_1544 GCA_000177335.1|ADFP01000039.1 Genbank CDS 22578 24068 . - 0 ID=cds-EFB91459.1;Parent=gene-HMPREF7215_1544;Dbxref=NCBI_GP:EFB91459.1;Name=EFB91459.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313;gbkey=CDS;gene=cobQ;locus_tag=HMPREF7215_1544;product=cobyric acid synthase CobQ;protein_id=EFB91459.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 24621 26015 . + . ID=gene-HMPREF7215_1545;Name=HMPREF7215_1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1545 GCA_000177335.1|ADFP01000039.1 Genbank CDS 24621 26015 . + 0 ID=cds-EFB91460.1;Parent=gene-HMPREF7215_1545;Dbxref=NCBI_GP:EFB91460.1;Name=EFB91460.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_1545;product=MATE efflux family protein;protein_id=EFB91460.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 26161 26820 . - . ID=gene-HMPREF7215_1546;Name=HMPREF7215_1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1546 GCA_000177335.1|ADFP01000039.1 Genbank CDS 26161 26820 . - 0 ID=cds-EFB91461.1;Parent=gene-HMPREF7215_1546;Dbxref=NCBI_GP:EFB91461.1;Name=EFB91461.1;Note=identified by match to protein family HMM PF00230;gbkey=CDS;locus_tag=HMPREF7215_1546;product=MIP family channel protein;protein_id=EFB91461.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 26911 27114 . - . ID=gene-HMPREF7215_1547;Name=HMPREF7215_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1547 GCA_000177335.1|ADFP01000039.1 Genbank CDS 26911 27114 . - 0 ID=cds-EFB91462.1;Parent=gene-HMPREF7215_1547;Dbxref=NCBI_GP:EFB91462.1;Name=EFB91462.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1547;product=hypothetical protein;protein_id=EFB91462.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 27243 27818 . + . ID=gene-HMPREF7215_1548;Name=HMPREF7215_1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1548 GCA_000177335.1|ADFP01000039.1 Genbank CDS 27243 27818 . + 0 ID=cds-EFB91463.1;Parent=gene-HMPREF7215_1548;Dbxref=NCBI_GP:EFB91463.1;Name=EFB91463.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF7215_1548;product=nitroreductase family protein;protein_id=EFB91463.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 27826 27948 . + . ID=gene-HMPREF7215_1550;Name=HMPREF7215_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1550 GCA_000177335.1|ADFP01000039.1 Genbank CDS 27826 27948 . + 0 ID=cds-EFB91464.1;Parent=gene-HMPREF7215_1550;Dbxref=NCBI_GP:EFB91464.1;Name=EFB91464.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1550;product=hypothetical protein;protein_id=EFB91464.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 27932 28201 . - . ID=gene-HMPREF7215_1549;Name=HMPREF7215_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1549 GCA_000177335.1|ADFP01000039.1 Genbank CDS 27932 28201 . - 0 ID=cds-EFB91465.1;Parent=gene-HMPREF7215_1549;Dbxref=NCBI_GP:EFB91465.1;Name=EFB91465.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1549;product=hypothetical protein;protein_id=EFB91465.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 28233 28475 . - . ID=gene-HMPREF7215_1551;Name=HMPREF7215_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1551 GCA_000177335.1|ADFP01000039.1 Genbank CDS 28233 28475 . - 0 ID=cds-EFB91466.1;Parent=gene-HMPREF7215_1551;Dbxref=NCBI_GP:EFB91466.1;Name=EFB91466.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1551;product=hypothetical protein;protein_id=EFB91466.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 28468 28614 . + . ID=gene-HMPREF7215_1552;Name=HMPREF7215_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1552 GCA_000177335.1|ADFP01000039.1 Genbank CDS 28468 28614 . + 0 ID=cds-EFB91467.1;Parent=gene-HMPREF7215_1552;Dbxref=NCBI_GP:EFB91467.1;Name=EFB91467.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1552;product=hypothetical protein;protein_id=EFB91467.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 28649 29362 . + . ID=gene-HMPREF7215_1553;Name=HMPREF7215_1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1553 GCA_000177335.1|ADFP01000039.1 Genbank CDS 28649 29362 . + 0 ID=cds-EFB91468.1;Parent=gene-HMPREF7215_1553;Dbxref=NCBI_GP:EFB91468.1;Name=EFB91468.1;Note=identified by match to protein family HMM PF03591;gbkey=CDS;locus_tag=HMPREF7215_1553;product=putative azaleucine resistance protein AzlC;protein_id=EFB91468.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 29359 29685 . + . ID=gene-HMPREF7215_1554;Name=azlD;gbkey=Gene;gene=azlD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1554 GCA_000177335.1|ADFP01000039.1 Genbank CDS 29359 29685 . + 0 ID=cds-EFB91469.1;Parent=gene-HMPREF7215_1554;Dbxref=NCBI_GP:EFB91469.1;Name=EFB91469.1;Note=identified by match to protein family HMM PF05437;gbkey=CDS;gene=azlD;locus_tag=HMPREF7215_1554;product=branched-chain amino acid transport protein AzlD;protein_id=EFB91469.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 29881 31296 . + . ID=gene-HMPREF7215_1555;Name=HMPREF7215_1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1555 GCA_000177335.1|ADFP01000039.1 Genbank CDS 29881 31296 . + 0 ID=cds-EFB91470.1;Parent=gene-HMPREF7215_1555;Dbxref=NCBI_GP:EFB91470.1;Name=EFB91470.1;gbkey=CDS;locus_tag=HMPREF7215_1555;product=putative amidophosphoribosyltransferase;protein_id=EFB91470.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 31396 32649 . - . ID=gene-HMPREF7215_1556;Name=HMPREF7215_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1556 GCA_000177335.1|ADFP01000039.1 Genbank CDS 31396 32649 . - 0 ID=cds-EFB91471.1;Parent=gene-HMPREF7215_1556;Dbxref=NCBI_GP:EFB91471.1;Name=EFB91471.1;gbkey=CDS;locus_tag=HMPREF7215_1556;product=hypothetical protein;protein_id=EFB91471.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 32682 32834 . + . ID=gene-HMPREF7215_1557;Name=HMPREF7215_1557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1557 GCA_000177335.1|ADFP01000039.1 Genbank CDS 32682 32834 . + 0 ID=cds-EFB91472.1;Parent=gene-HMPREF7215_1557;Dbxref=NCBI_GP:EFB91472.1;Name=EFB91472.1;gbkey=CDS;locus_tag=HMPREF7215_1557;product=hypothetical protein;protein_id=EFB91472.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 32952 34580 . - . ID=gene-HMPREF7215_1558;Name=HMPREF7215_1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1558 GCA_000177335.1|ADFP01000039.1 Genbank CDS 32952 34580 . - 0 ID=cds-EFB91473.1;Parent=gene-HMPREF7215_1558;Dbxref=NCBI_GP:EFB91473.1;Name=EFB91473.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_1558;product=radical SAM domain protein;protein_id=EFB91473.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 34914 36074 . - . ID=gene-HMPREF7215_1559;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1559 GCA_000177335.1|ADFP01000039.1 Genbank CDS 34914 36074 . - 0 ID=cds-EFB91474.1;Parent=gene-HMPREF7215_1559;Dbxref=NCBI_GP:EFB91474.1;Name=EFB91474.1;Note=identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012;gbkey=CDS;gene=recA;locus_tag=HMPREF7215_1559;product=RecA protein;protein_id=EFB91474.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 36111 36695 . - . ID=gene-HMPREF7215_1560;Name=HMPREF7215_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1560 GCA_000177335.1|ADFP01000039.1 Genbank CDS 36111 36695 . - 0 ID=cds-EFB91475.1;Parent=gene-HMPREF7215_1560;Dbxref=NCBI_GP:EFB91475.1;Name=EFB91475.1;Note=identified by match to protein family HMM PF02834%3B match to protein family HMM TIGR02258;gbkey=CDS;locus_tag=HMPREF7215_1560;product=2'-5' RNA ligase;protein_id=EFB91475.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 36695 37192 . - . ID=gene-HMPREF7215_1561;Name=HMPREF7215_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1561 GCA_000177335.1|ADFP01000039.1 Genbank CDS 36695 37192 . - 0 ID=cds-EFB91476.1;Parent=gene-HMPREF7215_1561;Dbxref=NCBI_GP:EFB91476.1;Name=EFB91476.1;Note=identified by match to protein family HMM PF02464%3B match to protein family HMM TIGR00199;gbkey=CDS;locus_tag=HMPREF7215_1561;product=competence/damage-inducible domain protein CinA;protein_id=EFB91476.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 37226 37723 . - . ID=gene-HMPREF7215_1562;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1562 GCA_000177335.1|ADFP01000039.1 Genbank CDS 37226 37723 . - 0 ID=cds-EFB91477.1;Parent=gene-HMPREF7215_1562;Dbxref=NCBI_GP:EFB91477.1;Name=EFB91477.1;Note=identified by match to protein family HMM PF04608;gbkey=CDS;gene=pgpA;locus_tag=HMPREF7215_1562;product=phosphatidylglycerophosphatase A;protein_id=EFB91477.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 37716 39020 . - . ID=gene-HMPREF7215_1563;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=HMPREF7215_1563 GCA_000177335.1|ADFP01000039.1 Genbank CDS 37716 39020 . - 0 ID=cds-EFB91478.1;Parent=gene-HMPREF7215_1563;Dbxref=NCBI_GP:EFB91478.1;Name=EFB91478.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125;gbkey=CDS;gene=rimO;locus_tag=HMPREF7215_1563;product=ribosomal protein S12 methylthiotransferase RimO;protein_id=EFB91478.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 39024 40022 . - . ID=gene-HMPREF7215_1564;Name=HMPREF7215_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1564 GCA_000177335.1|ADFP01000039.1 Genbank CDS 39024 40022 . - 0 ID=cds-EFB91479.1;Parent=gene-HMPREF7215_1564;Dbxref=NCBI_GP:EFB91479.1;Name=EFB91479.1;gbkey=CDS;locus_tag=HMPREF7215_1564;product=hypothetical protein;protein_id=EFB91479.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 40081 40764 . - . ID=gene-HMPREF7215_1565;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=HMPREF7215_1565 GCA_000177335.1|ADFP01000039.1 Genbank CDS 40081 40764 . - 0 ID=cds-EFB91480.1;Parent=gene-HMPREF7215_1565;Dbxref=NCBI_GP:EFB91480.1;Name=EFB91480.1;Note=identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;locus_tag=HMPREF7215_1565;product=ribulose-phosphate 3-epimerase;protein_id=EFB91480.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 40743 41828 . - . ID=gene-HMPREF7215_1566;Name=HMPREF7215_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1566 GCA_000177335.1|ADFP01000039.1 Genbank CDS 40743 41828 . - 0 ID=cds-EFB91481.1;Parent=gene-HMPREF7215_1566;Dbxref=NCBI_GP:EFB91481.1;Name=EFB91481.1;Note=identified by match to protein family HMM PF03793;gbkey=CDS;locus_tag=HMPREF7215_1566;product=PASTA domain protein;protein_id=EFB91481.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 41854 43173 . - . ID=gene-HMPREF7215_1567;Name=HMPREF7215_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1567 GCA_000177335.1|ADFP01000039.1 Genbank CDS 41854 43173 . - 0 ID=cds-EFB91482.1;Parent=gene-HMPREF7215_1567;Dbxref=NCBI_GP:EFB91482.1;Name=EFB91482.1;Note=identified by match to protein family HMM PF01189;gbkey=CDS;locus_tag=HMPREF7215_1567;product=putative ribosomal RNA small subunit methyltransferase B;protein_id=EFB91482.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 43181 43882 . - . ID=gene-HMPREF7215_1568;Name=HMPREF7215_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1568 GCA_000177335.1|ADFP01000039.1 Genbank CDS 43181 43882 . - 0 ID=cds-EFB91483.1;Parent=gene-HMPREF7215_1568;Dbxref=NCBI_GP:EFB91483.1;Name=EFB91483.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1568;product=hypothetical protein;protein_id=EFB91483.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 43964 44659 . - . ID=gene-HMPREF7215_1569;Name=HMPREF7215_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1569 GCA_000177335.1|ADFP01000039.1 Genbank CDS 43964 44659 . - 0 ID=cds-EFB91484.1;Parent=gene-HMPREF7215_1569;Dbxref=NCBI_GP:EFB91484.1;Name=EFB91484.1;Note=identified by match to protein family HMM PF04298;gbkey=CDS;locus_tag=HMPREF7215_1569;product=putative neutral zinc metallopeptidase;protein_id=EFB91484.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 44753 45886 . - . ID=gene-HMPREF7215_1570;Name=degT;gbkey=Gene;gene=degT;gene_biotype=protein_coding;locus_tag=HMPREF7215_1570 GCA_000177335.1|ADFP01000039.1 Genbank CDS 44753 45886 . - 0 ID=cds-EFB91485.1;Parent=gene-HMPREF7215_1570;Dbxref=NCBI_GP:EFB91485.1;Name=EFB91485.1;Note=identified by match to protein family HMM PF01041%3B match to protein family HMM PF01212;gbkey=CDS;gene=degT;locus_tag=HMPREF7215_1570;product=pleiotropic regulatory protein DegT;protein_id=EFB91485.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 46112 46309 . + . ID=gene-HMPREF7215_1571;Name=HMPREF7215_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1571 GCA_000177335.1|ADFP01000039.1 Genbank CDS 46112 46309 . + 0 ID=cds-EFB91486.1;Parent=gene-HMPREF7215_1571;Dbxref=NCBI_GP:EFB91486.1;Name=EFB91486.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1571;product=hypothetical protein;protein_id=EFB91486.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 46404 46769 . - . ID=gene-HMPREF7215_1572;Name=HMPREF7215_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1572 GCA_000177335.1|ADFP01000039.1 Genbank CDS 46404 46769 . - 0 ID=cds-EFB91487.1;Parent=gene-HMPREF7215_1572;Dbxref=NCBI_GP:EFB91487.1;Name=EFB91487.1;Note=identified by match to protein family HMM PF01880%3B match to protein family HMM TIGR00332;gbkey=CDS;locus_tag=HMPREF7215_1572;product=desulfoferrodoxin ferrous iron-binding domain protein;protein_id=EFB91487.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 46816 46965 . - . ID=gene-HMPREF7215_1573;Name=HMPREF7215_1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1573 GCA_000177335.1|ADFP01000039.1 Genbank CDS 46816 46965 . - 0 ID=cds-EFB91488.1;Parent=gene-HMPREF7215_1573;Dbxref=NCBI_GP:EFB91488.1;Name=EFB91488.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1573;product=hypothetical protein;protein_id=EFB91488.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 46935 47873 . - . ID=gene-HMPREF7215_1574;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1574 GCA_000177335.1|ADFP01000039.1 Genbank CDS 46935 47873 . - 0 ID=cds-EFB91489.1;Parent=gene-HMPREF7215_1574;Dbxref=NCBI_GP:EFB91489.1;Name=EFB91489.1;Note=identified by match to protein family HMM PF00226%3B match to protein family HMM PF01556;gbkey=CDS;gene=cbpA;locus_tag=HMPREF7215_1574;product=putative chaperone protein DnaJ;protein_id=EFB91489.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 47980 48885 . + . ID=gene-HMPREF7215_1575;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1575 GCA_000177335.1|ADFP01000039.1 Genbank CDS 47980 48885 . + 0 ID=cds-EFB91490.1;Parent=gene-HMPREF7215_1575;Dbxref=NCBI_GP:EFB91490.1;Name=EFB91490.1;Note=identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652;gbkey=CDS;gene=dapF;locus_tag=HMPREF7215_1575;product=diaminopimelate epimerase;protein_id=EFB91490.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 48914 49120 . + . ID=gene-HMPREF7215_1576;Name=HMPREF7215_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1576 GCA_000177335.1|ADFP01000039.1 Genbank CDS 48914 49120 . + 0 ID=cds-EFB91491.1;Parent=gene-HMPREF7215_1576;Dbxref=NCBI_GP:EFB91491.1;Name=EFB91491.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1576;product=hypothetical protein;protein_id=EFB91491.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 49178 49513 . + . ID=gene-HMPREF7215_1577;Name=HMPREF7215_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1577 GCA_000177335.1|ADFP01000039.1 Genbank CDS 49178 49513 . + 0 ID=cds-EFB91492.1;Parent=gene-HMPREF7215_1577;Dbxref=NCBI_GP:EFB91492.1;Name=EFB91492.1;Note=identified by match to protein family HMM PF01219;gbkey=CDS;locus_tag=HMPREF7215_1577;product=prokaryotic diacylglycerol kinase;protein_id=EFB91492.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 49746 51389 . + . ID=gene-HMPREF7215_1578;Name=HMPREF7215_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1578 GCA_000177335.1|ADFP01000039.1 Genbank CDS 49746 51389 . + 0 ID=cds-EFB91493.1;Parent=gene-HMPREF7215_1578;Dbxref=NCBI_GP:EFB91493.1;Name=EFB91493.1;Note=identified by match to protein family HMM PF01895%3B match to protein family HMM PF02690%3B match to protein family HMM TIGR00704;gbkey=CDS;locus_tag=HMPREF7215_1578;product=Na/Pi-cotransporter II-like protein;protein_id=EFB91493.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 51473 51625 . + . ID=gene-HMPREF7215_1579;Name=HMPREF7215_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1579 GCA_000177335.1|ADFP01000039.1 Genbank CDS 51473 51625 . + 0 ID=cds-EFB91494.1;Parent=gene-HMPREF7215_1579;Dbxref=NCBI_GP:EFB91494.1;Name=EFB91494.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1579;product=hypothetical protein;protein_id=EFB91494.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 51714 52388 . + . ID=gene-HMPREF7215_1580;Name=HMPREF7215_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1580 GCA_000177335.1|ADFP01000039.1 Genbank CDS 51714 52388 . + 0 ID=cds-EFB91495.1;Parent=gene-HMPREF7215_1580;Dbxref=NCBI_GP:EFB91495.1;Name=EFB91495.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1580;product=FCD domain protein;protein_id=EFB91495.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 52507 52668 . + . ID=gene-HMPREF7215_1581;Name=HMPREF7215_1581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1581 GCA_000177335.1|ADFP01000039.1 Genbank CDS 52507 52668 . + 0 ID=cds-EFB91496.1;Parent=gene-HMPREF7215_1581;Dbxref=NCBI_GP:EFB91496.1;Name=EFB91496.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1581;product=hypothetical protein;protein_id=EFB91496.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 52665 52958 . + . ID=gene-HMPREF7215_1582;Name=HMPREF7215_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1582 GCA_000177335.1|ADFP01000039.1 Genbank CDS 52665 52958 . + 0 ID=cds-EFB91497.1;Parent=gene-HMPREF7215_1582;Dbxref=NCBI_GP:EFB91497.1;Name=EFB91497.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1582;product=hypothetical protein;protein_id=EFB91497.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 53320 53976 . + . ID=gene-HMPREF7215_1583;Name=HMPREF7215_1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1583 GCA_000177335.1|ADFP01000039.1 Genbank CDS 53320 53976 . + 0 ID=cds-EFB91498.1;Parent=gene-HMPREF7215_1583;Dbxref=NCBI_GP:EFB91498.1;Name=EFB91498.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF7215_1583;product=metallo-beta-lactamase domain protein;protein_id=EFB91498.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 54165 55262 . + . ID=gene-HMPREF7215_1584;Name=HMPREF7215_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1584 GCA_000177335.1|ADFP01000039.1 Genbank CDS 54165 55262 . + 0 ID=cds-EFB91499.1;Parent=gene-HMPREF7215_1584;Dbxref=NCBI_GP:EFB91499.1;Name=EFB91499.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;locus_tag=HMPREF7215_1584;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91499.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 55255 55908 . + . ID=gene-HMPREF7215_1585;Name=HMPREF7215_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1585 GCA_000177335.1|ADFP01000039.1 Genbank CDS 55255 55908 . + 0 ID=cds-EFB91500.1;Parent=gene-HMPREF7215_1585;Dbxref=NCBI_GP:EFB91500.1;Name=EFB91500.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1585;product=ABC transporter%2C permease protein;protein_id=EFB91500.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 55935 56729 . + . ID=gene-HMPREF7215_1586;Name=HMPREF7215_1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1586 GCA_000177335.1|ADFP01000039.1 Genbank CDS 55935 56729 . + 0 ID=cds-EFB91501.1;Parent=gene-HMPREF7215_1586;Dbxref=NCBI_GP:EFB91501.1;Name=EFB91501.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;locus_tag=HMPREF7215_1586;product=NLPA lipoprotein;protein_id=EFB91501.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 56817 56969 . + . ID=gene-HMPREF7215_1587;Name=HMPREF7215_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1587 GCA_000177335.1|ADFP01000039.1 Genbank CDS 56817 56969 . + 0 ID=cds-EFB91502.1;Parent=gene-HMPREF7215_1587;Dbxref=NCBI_GP:EFB91502.1;Name=EFB91502.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1587;product=hypothetical protein;protein_id=EFB91502.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 57128 57253 . + . ID=gene-HMPREF7215_1588;Name=HMPREF7215_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1588 GCA_000177335.1|ADFP01000039.1 Genbank CDS 57128 57253 . + 0 ID=cds-EFB91503.1;Parent=gene-HMPREF7215_1588;Dbxref=NCBI_GP:EFB91503.1;Name=EFB91503.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1588;product=hypothetical protein;protein_id=EFB91503.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 57268 57414 . - . ID=gene-HMPREF7215_1589;Name=HMPREF7215_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1589 GCA_000177335.1|ADFP01000039.1 Genbank CDS 57268 57414 . - 0 ID=cds-EFB91504.1;Parent=gene-HMPREF7215_1589;Dbxref=NCBI_GP:EFB91504.1;Name=EFB91504.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1589;product=hypothetical protein;protein_id=EFB91504.1;transl_table=11 GCA_000177335.1|ADFP01000039.1 Genbank gene 57383 58303 . + . ID=gene-HMPREF7215_1590;Name=HMPREF7215_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1590 GCA_000177335.1|ADFP01000039.1 Genbank CDS 57383 58303 . + 0 ID=cds-EFB91505.1;Parent=gene-HMPREF7215_1590;Dbxref=NCBI_GP:EFB91505.1;Name=EFB91505.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1590;product=hypothetical protein;protein_id=EFB91505.1;transl_table=11 ##sequence-region ADFP01000038.1 1 7454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000038.1 Genbank region 1 7454 . + . ID=ADFP01000038.1:1..7454;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000038.1 Genbank gene 141 314 . - . ID=gene-HMPREF7215_1474;Name=HMPREF7215_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1474 GCA_000177335.1|ADFP01000038.1 Genbank CDS 141 314 . - 0 ID=cds-EFB91506.1;Parent=gene-HMPREF7215_1474;Dbxref=NCBI_GP:EFB91506.1;Name=EFB91506.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1474;product=hypothetical protein;protein_id=EFB91506.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 315 1316 . + . ID=gene-HMPREF7215_1475;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1475 GCA_000177335.1|ADFP01000038.1 Genbank CDS 315 1316 . + 0 ID=cds-EFB91507.1;Parent=gene-HMPREF7215_1475;Dbxref=NCBI_GP:EFB91507.1;Name=EFB91507.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361;gbkey=CDS;gene=aroF;locus_tag=HMPREF7215_1475;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=EFB91507.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 1313 2152 . + . ID=gene-HMPREF7215_1476;Name=HMPREF7215_1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1476 GCA_000177335.1|ADFP01000038.1 Genbank CDS 1313 2152 . + 0 ID=cds-EFB91508.1;Parent=gene-HMPREF7215_1476;Dbxref=NCBI_GP:EFB91508.1;Name=EFB91508.1;Note=identified by match to protein family HMM PF02153;gbkey=CDS;locus_tag=HMPREF7215_1476;product=prephenate dehydrogenase;protein_id=EFB91508.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 2153 3241 . + . ID=gene-HMPREF7215_1477;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1477 GCA_000177335.1|ADFP01000038.1 Genbank CDS 2153 3241 . + 0 ID=cds-EFB91509.1;Parent=gene-HMPREF7215_1477;Dbxref=NCBI_GP:EFB91509.1;Name=EFB91509.1;Note=identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357;gbkey=CDS;gene=aroB;locus_tag=HMPREF7215_1477;product=3-dehydroquinate synthase;protein_id=EFB91509.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 3238 4503 . + . ID=gene-HMPREF7215_1478;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1478 GCA_000177335.1|ADFP01000038.1 Genbank CDS 3238 4503 . + 0 ID=cds-EFB91510.1;Parent=gene-HMPREF7215_1478;Dbxref=NCBI_GP:EFB91510.1;Name=EFB91510.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356;gbkey=CDS;gene=aroA;locus_tag=HMPREF7215_1478;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=EFB91510.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 4506 5609 . + . ID=gene-HMPREF7215_1479;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1479 GCA_000177335.1|ADFP01000038.1 Genbank CDS 4506 5609 . + 0 ID=cds-EFB91511.1;Parent=gene-HMPREF7215_1479;Dbxref=NCBI_GP:EFB91511.1;Name=EFB91511.1;Note=identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033;gbkey=CDS;gene=aroC;locus_tag=HMPREF7215_1479;product=chorismate synthase;protein_id=EFB91511.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 5613 6752 . + . ID=gene-HMPREF7215_1480;Name=HMPREF7215_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1480 GCA_000177335.1|ADFP01000038.1 Genbank CDS 5613 6752 . + 0 ID=cds-EFB91512.1;Parent=gene-HMPREF7215_1480;Dbxref=NCBI_GP:EFB91512.1;Name=EFB91512.1;Note=identified by match to protein family HMM PF00800%3B match to protein family HMM PF01817;gbkey=CDS;locus_tag=HMPREF7215_1480;product=prephenate dehydratase;protein_id=EFB91512.1;transl_table=11 GCA_000177335.1|ADFP01000038.1 Genbank gene 6753 7454 . + . ID=gene-HMPREF7215_1481;Name=HMPREF7215_1481;end_range=7454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1481;partial=true GCA_000177335.1|ADFP01000038.1 Genbank CDS 6753 7454 . + 0 ID=cds-EFB91513.1;Parent=gene-HMPREF7215_1481;Dbxref=NCBI_GP:EFB91513.1;Name=EFB91513.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501;end_range=7454,.;gbkey=CDS;locus_tag=HMPREF7215_1481;partial=true;product=putative shikimate dehydrogenase;protein_id=EFB91513.1;transl_table=11 ##sequence-region ADFP01000037.1 1 1442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000037.1 Genbank region 1 1442 . + . ID=ADFP01000037.1:1..1442;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000037.1 Genbank gene 100 222 . - . ID=gene-HMPREF7215_1661;Name=HMPREF7215_1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1661 GCA_000177335.1|ADFP01000037.1 Genbank CDS 100 222 . - 0 ID=cds-EFB91514.1;Parent=gene-HMPREF7215_1661;Dbxref=NCBI_GP:EFB91514.1;Name=EFB91514.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1661;product=hypothetical protein;protein_id=EFB91514.1;transl_table=11 GCA_000177335.1|ADFP01000037.1 Genbank gene 310 1404 . + . ID=gene-HMPREF7215_1662;Name=HMPREF7215_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1662 GCA_000177335.1|ADFP01000037.1 Genbank CDS 310 1404 . + 0 ID=cds-EFB91515.1;Parent=gene-HMPREF7215_1662;Dbxref=NCBI_GP:EFB91515.1;Name=EFB91515.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236;gbkey=CDS;locus_tag=HMPREF7215_1662;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=EFB91515.1;transl_table=11 ##sequence-region ADFP01000036.1 1 561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000036.1 Genbank region 1 561 . + . ID=ADFP01000036.1:1..561;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000035.1 1 993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000035.1 Genbank region 1 993 . + . ID=ADFP01000035.1:1..993;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000034.1 1 15978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000034.1 Genbank region 1 15978 . + . ID=ADFP01000034.1:1..15978;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000034.1 Genbank gene 417 749 . + . ID=gene-HMPREF7215_1893;Name=HMPREF7215_1893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1893 GCA_000177335.1|ADFP01000034.1 Genbank CDS 417 749 . + 0 ID=cds-EFB91516.1;Parent=gene-HMPREF7215_1893;Dbxref=NCBI_GP:EFB91516.1;Name=EFB91516.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts;gbkey=CDS;locus_tag=HMPREF7215_1893;product=hypothetical protein;protein_id=EFB91516.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 781 915 . + . ID=gene-HMPREF7215_1894;Name=HMPREF7215_1894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1894 GCA_000177335.1|ADFP01000034.1 Genbank CDS 781 915 . + 0 ID=cds-EFB91517.1;Parent=gene-HMPREF7215_1894;Dbxref=NCBI_GP:EFB91517.1;Name=EFB91517.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1894;product=hypothetical protein;protein_id=EFB91517.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 964 1113 . + . ID=gene-HMPREF7215_1895;Name=HMPREF7215_1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1895 GCA_000177335.1|ADFP01000034.1 Genbank CDS 964 1113 . + 0 ID=cds-EFB91518.1;Parent=gene-HMPREF7215_1895;Dbxref=NCBI_GP:EFB91518.1;Name=EFB91518.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1895;product=hypothetical protein;protein_id=EFB91518.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 1291 2466 . - . ID=gene-HMPREF7215_1896;Name=HMPREF7215_1896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1896 GCA_000177335.1|ADFP01000034.1 Genbank CDS 1291 2466 . - 0 ID=cds-EFB91519.1;Parent=gene-HMPREF7215_1896;Dbxref=NCBI_GP:EFB91519.1;Name=EFB91519.1;Note=identified by match to protein family HMM PF09651%3B match to protein family HMM TIGR02619;gbkey=CDS;locus_tag=HMPREF7215_1896;product=CRISPR-associated protein%2C APE2256 family;protein_id=EFB91519.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 2624 4825 . + . ID=gene-HMPREF7215_1897;Name=HMPREF7215_1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1897 GCA_000177335.1|ADFP01000034.1 Genbank CDS 2624 4825 . + 0 ID=cds-EFB91520.1;Parent=gene-HMPREF7215_1897;Dbxref=NCBI_GP:EFB91520.1;Name=EFB91520.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1897;product=CRISPR-associated protein%2C APE2256 family;protein_id=EFB91520.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 5087 6307 . + . ID=gene-HMPREF7215_1898;Name=cmr1;gbkey=Gene;gene=cmr1;gene_biotype=protein_coding;locus_tag=HMPREF7215_1898 GCA_000177335.1|ADFP01000034.1 Genbank CDS 5087 6307 . + 0 ID=cds-EFB91521.1;Parent=gene-HMPREF7215_1898;Dbxref=NCBI_GP:EFB91521.1;Name=EFB91521.1;Note=identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR01894;gbkey=CDS;gene=cmr1;locus_tag=HMPREF7215_1898;product=CRISPR-associated RAMP protein%2C Cmr1 family;protein_id=EFB91521.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 6304 8193 . + . ID=gene-HMPREF7215_1899;Name=cmr2;gbkey=Gene;gene=cmr2;gene_biotype=protein_coding;locus_tag=HMPREF7215_1899 GCA_000177335.1|ADFP01000034.1 Genbank CDS 6304 8193 . + 0 ID=cds-EFB91522.1;Parent=gene-HMPREF7215_1899;Dbxref=NCBI_GP:EFB91522.1;Name=EFB91522.1;Note=identified by match to protein family HMM TIGR02577;gbkey=CDS;gene=cmr2;locus_tag=HMPREF7215_1899;product=CRISPR-associated protein%2C Cmr2 family;protein_id=EFB91522.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 8190 9335 . + . ID=gene-HMPREF7215_1900;Name=HMPREF7215_1900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1900 GCA_000177335.1|ADFP01000034.1 Genbank CDS 8190 9335 . + 0 ID=cds-EFB91523.1;Parent=gene-HMPREF7215_1900;Dbxref=NCBI_GP:EFB91523.1;Name=EFB91523.1;Note=identified by match to protein family HMM PF09700;gbkey=CDS;locus_tag=HMPREF7215_1900;product=putative CRISPR-associated protein%2C Cmr3 family;protein_id=EFB91523.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 9350 10270 . + . ID=gene-HMPREF7215_1901;Name=cmr4;gbkey=Gene;gene=cmr4;gene_biotype=protein_coding;locus_tag=HMPREF7215_1901 GCA_000177335.1|ADFP01000034.1 Genbank CDS 9350 10270 . + 0 ID=cds-EFB91524.1;Parent=gene-HMPREF7215_1901;Dbxref=NCBI_GP:EFB91524.1;Name=EFB91524.1;Note=identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02580;gbkey=CDS;gene=cmr4;locus_tag=HMPREF7215_1901;product=CRISPR-associated RAMP protein%2C Cmr4 family;protein_id=EFB91524.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 10263 10646 . + . ID=gene-HMPREF7215_1902;Name=cmr5;gbkey=Gene;gene=cmr5;gene_biotype=protein_coding;locus_tag=HMPREF7215_1902 GCA_000177335.1|ADFP01000034.1 Genbank CDS 10263 10646 . + 0 ID=cds-EFB91525.1;Parent=gene-HMPREF7215_1902;Dbxref=NCBI_GP:EFB91525.1;Name=EFB91525.1;Note=identified by match to protein family HMM PF09701%3B match to protein family HMM TIGR01881;gbkey=CDS;gene=cmr5;locus_tag=HMPREF7215_1902;product=CRISPR-associated protein%2C Cmr5 family;protein_id=EFB91525.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 10643 11755 . + . ID=gene-HMPREF7215_1903;Name=cmr6;gbkey=Gene;gene=cmr6;gene_biotype=protein_coding;locus_tag=HMPREF7215_1903 GCA_000177335.1|ADFP01000034.1 Genbank CDS 10643 11755 . + 0 ID=cds-EFB91526.1;Parent=gene-HMPREF7215_1903;Dbxref=NCBI_GP:EFB91526.1;Name=EFB91526.1;Note=identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR01898;gbkey=CDS;gene=cmr6;locus_tag=HMPREF7215_1903;product=CRISPR-associated RAMP protein%2C Cmr6 family;protein_id=EFB91526.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 11913 12074 . - . ID=gene-HMPREF7215_1904;Name=HMPREF7215_1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1904 GCA_000177335.1|ADFP01000034.1 Genbank CDS 11913 12074 . - 0 ID=cds-EFB91527.1;Parent=gene-HMPREF7215_1904;Dbxref=NCBI_GP:EFB91527.1;Name=EFB91527.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1904;product=hypothetical protein;protein_id=EFB91527.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 13880 14029 . - . ID=gene-HMPREF7215_1905;Name=HMPREF7215_1905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1905 GCA_000177335.1|ADFP01000034.1 Genbank CDS 13880 14029 . - 0 ID=cds-EFB91528.1;Parent=gene-HMPREF7215_1905;Dbxref=NCBI_GP:EFB91528.1;Name=EFB91528.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1905;product=hypothetical protein;protein_id=EFB91528.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 14463 14777 . + . ID=gene-HMPREF7215_1906;Name=HMPREF7215_1906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1906 GCA_000177335.1|ADFP01000034.1 Genbank CDS 14463 14777 . + 0 ID=cds-EFB91529.1;Parent=gene-HMPREF7215_1906;Dbxref=NCBI_GP:EFB91529.1;Name=EFB91529.1;gbkey=CDS;locus_tag=HMPREF7215_1906;product=hypothetical protein;protein_id=EFB91529.1;transl_table=11 GCA_000177335.1|ADFP01000034.1 Genbank gene 14982 15191 . + . ID=gene-HMPREF7215_1907;Name=HMPREF7215_1907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1907 GCA_000177335.1|ADFP01000034.1 Genbank CDS 14982 15191 . + 0 ID=cds-EFB91530.1;Parent=gene-HMPREF7215_1907;Dbxref=NCBI_GP:EFB91530.1;Name=EFB91530.1;Note=identified by match to protein family HMM PF03459;gbkey=CDS;locus_tag=HMPREF7215_1907;product=TOBE domain protein;protein_id=EFB91530.1;transl_table=11 ##sequence-region ADFP01000033.1 1 3026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000033.1 Genbank region 1 3026 . + . ID=ADFP01000033.1:1..3026;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000033.1 Genbank gene 1 235 . + . ID=gene-HMPREF7215_1468;Name=HMPREF7215_1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1468;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000033.1 Genbank CDS 1 235 . + 1 ID=cds-EFB91531.1;Parent=gene-HMPREF7215_1468;Dbxref=NCBI_GP:EFB91531.1;Name=EFB91531.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1468;partial=true;product=hypothetical protein;protein_id=EFB91531.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000033.1 Genbank gene 773 892 . + . ID=gene-HMPREF7215_1469;Name=HMPREF7215_1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1469 GCA_000177335.1|ADFP01000033.1 Genbank CDS 773 892 . + 0 ID=cds-EFB91532.1;Parent=gene-HMPREF7215_1469;Dbxref=NCBI_GP:EFB91532.1;Name=EFB91532.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1469;product=hypothetical protein;protein_id=EFB91532.1;transl_table=11 GCA_000177335.1|ADFP01000033.1 Genbank gene 1082 3026 . + . ID=gene-HMPREF7215_1470;Name=HMPREF7215_1470;end_range=3026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1470;partial=true GCA_000177335.1|ADFP01000033.1 Genbank CDS 1082 3026 . + 0 ID=cds-EFB91533.1;Parent=gene-HMPREF7215_1470;Dbxref=NCBI_GP:EFB91533.1;Name=EFB91533.1;Note=identified by glimmer%3B putative;end_range=3026,.;gbkey=CDS;locus_tag=HMPREF7215_1470;partial=true;product=hypothetical protein;protein_id=EFB91533.1;transl_table=11 ##sequence-region ADFP01000032.1 1 729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000032.1 Genbank region 1 729 . + . ID=ADFP01000032.1:1..729;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000032.1 Genbank gene 1 684 . - . ID=gene-HMPREF7215_1667;Name=HMPREF7215_1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1667;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000032.1 Genbank CDS 1 684 . - 0 ID=cds-EFB91534.1;Parent=gene-HMPREF7215_1667;Dbxref=NCBI_GP:EFB91534.1;Name=EFB91534.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1667;partial=true;product=hypothetical protein;protein_id=EFB91534.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000031.1 1 23580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000031.1 Genbank region 1 23580 . + . ID=ADFP01000031.1:1..23580;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000031.1 Genbank gene 20 547 . + . ID=gene-HMPREF7215_2796;Name=HMPREF7215_2796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2796 GCA_000177335.1|ADFP01000031.1 Genbank CDS 20 547 . + 0 ID=cds-EFB91535.1;Parent=gene-HMPREF7215_2796;Dbxref=NCBI_GP:EFB91535.1;Name=EFB91535.1;gbkey=CDS;locus_tag=HMPREF7215_2796;product=hypothetical protein;protein_id=EFB91535.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 582 776 . + . ID=gene-HMPREF7215_2797;Name=HMPREF7215_2797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2797 GCA_000177335.1|ADFP01000031.1 Genbank CDS 582 776 . + 0 ID=cds-EFB91536.1;Parent=gene-HMPREF7215_2797;Dbxref=NCBI_GP:EFB91536.1;Name=EFB91536.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2797;product=hypothetical protein;protein_id=EFB91536.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 795 983 . + . ID=gene-HMPREF7215_2798;Name=HMPREF7215_2798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2798 GCA_000177335.1|ADFP01000031.1 Genbank CDS 795 983 . + 0 ID=cds-EFB91537.1;Parent=gene-HMPREF7215_2798;Dbxref=NCBI_GP:EFB91537.1;Name=EFB91537.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2798;product=hypothetical protein;protein_id=EFB91537.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 1015 1236 . + . ID=gene-HMPREF7215_2799;Name=HMPREF7215_2799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2799 GCA_000177335.1|ADFP01000031.1 Genbank CDS 1015 1236 . + 0 ID=cds-EFB91538.1;Parent=gene-HMPREF7215_2799;Dbxref=NCBI_GP:EFB91538.1;Name=EFB91538.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2799;product=hypothetical protein;protein_id=EFB91538.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 1354 3357 . + . ID=gene-HMPREF7215_2800;Name=HMPREF7215_2800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2800 GCA_000177335.1|ADFP01000031.1 Genbank CDS 1354 3357 . + 0 ID=cds-EFB91539.1;Parent=gene-HMPREF7215_2800;Dbxref=NCBI_GP:EFB91539.1;Name=EFB91539.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF7215_2800;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFB91539.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 3360 3632 . + . ID=gene-HMPREF7215_2801;Name=HMPREF7215_2801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2801 GCA_000177335.1|ADFP01000031.1 Genbank CDS 3360 3632 . + 0 ID=cds-EFB91540.1;Parent=gene-HMPREF7215_2801;Dbxref=NCBI_GP:EFB91540.1;Name=EFB91540.1;gbkey=CDS;locus_tag=HMPREF7215_2801;product=hypothetical protein;protein_id=EFB91540.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 3629 4708 . + . ID=gene-HMPREF7215_2802;Name=HMPREF7215_2802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2802 GCA_000177335.1|ADFP01000031.1 Genbank CDS 3629 4708 . + 0 ID=cds-EFB91541.1;Parent=gene-HMPREF7215_2802;Dbxref=NCBI_GP:EFB91541.1;Name=EFB91541.1;Note=identified by match to protein family HMM PF05954;gbkey=CDS;locus_tag=HMPREF7215_2802;product=phage late control gene D protein (GPD);protein_id=EFB91541.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 4705 5172 . + . ID=gene-HMPREF7215_2803;Name=HMPREF7215_2803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2803 GCA_000177335.1|ADFP01000031.1 Genbank CDS 4705 5172 . + 0 ID=cds-EFB91542.1;Parent=gene-HMPREF7215_2803;Dbxref=NCBI_GP:EFB91542.1;Name=EFB91542.1;gbkey=CDS;locus_tag=HMPREF7215_2803;product=phage-related baseplate assembly protein;protein_id=EFB91542.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 5185 5313 . + . ID=gene-HMPREF7215_2804;Name=HMPREF7215_2804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2804 GCA_000177335.1|ADFP01000031.1 Genbank CDS 5185 5313 . + 0 ID=cds-EFB91543.1;Parent=gene-HMPREF7215_2804;Dbxref=NCBI_GP:EFB91543.1;Name=EFB91543.1;Note=paar;gbkey=CDS;locus_tag=HMPREF7215_2804;product=hypothetical protein;protein_id=EFB91543.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 5416 5559 . + . ID=gene-HMPREF7215_2805;Name=HMPREF7215_2805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2805 GCA_000177335.1|ADFP01000031.1 Genbank CDS 5416 5559 . + 0 ID=cds-EFB91544.1;Parent=gene-HMPREF7215_2805;Dbxref=NCBI_GP:EFB91544.1;Name=EFB91544.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B paar;gbkey=CDS;locus_tag=HMPREF7215_2805;product=hypothetical protein;protein_id=EFB91544.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 5566 5961 . + . ID=gene-HMPREF7215_2806;Name=HMPREF7215_2806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2806 GCA_000177335.1|ADFP01000031.1 Genbank CDS 5566 5961 . + 0 ID=cds-EFB91545.1;Parent=gene-HMPREF7215_2806;Dbxref=NCBI_GP:EFB91545.1;Name=EFB91545.1;gbkey=CDS;locus_tag=HMPREF7215_2806;product=hypothetical protein;protein_id=EFB91545.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 5958 6269 . + . ID=gene-HMPREF7215_2807;Name=HMPREF7215_2807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2807 GCA_000177335.1|ADFP01000031.1 Genbank CDS 5958 6269 . + 0 ID=cds-EFB91546.1;Parent=gene-HMPREF7215_2807;Dbxref=NCBI_GP:EFB91546.1;Name=EFB91546.1;Note=identified by match to protein family HMM PF04965;gbkey=CDS;locus_tag=HMPREF7215_2807;product=putative lysozyme;protein_id=EFB91546.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 6259 7392 . + . ID=gene-HMPREF7215_2808;Name=HMPREF7215_2808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2808 GCA_000177335.1|ADFP01000031.1 Genbank CDS 6259 7392 . + 0 ID=cds-EFB91547.1;Parent=gene-HMPREF7215_2808;Dbxref=NCBI_GP:EFB91547.1;Name=EFB91547.1;Note=identified by match to protein family HMM PF04865;gbkey=CDS;locus_tag=HMPREF7215_2808;product=baseplate J-like protein;protein_id=EFB91547.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 7385 8032 . + . ID=gene-HMPREF7215_2809;Name=HMPREF7215_2809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2809 GCA_000177335.1|ADFP01000031.1 Genbank CDS 7385 8032 . + 0 ID=cds-EFB91548.1;Parent=gene-HMPREF7215_2809;Dbxref=NCBI_GP:EFB91548.1;Name=EFB91548.1;Note=identified by match to protein family HMM PF09684;gbkey=CDS;locus_tag=HMPREF7215_2809;product=phage tail protein;protein_id=EFB91548.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 8045 9475 . + . ID=gene-HMPREF7215_2810;Name=HMPREF7215_2810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2810 GCA_000177335.1|ADFP01000031.1 Genbank CDS 8045 9475 . + 0 ID=cds-EFB91549.1;Parent=gene-HMPREF7215_2810;Dbxref=NCBI_GP:EFB91549.1;Name=EFB91549.1;gbkey=CDS;locus_tag=HMPREF7215_2810;product=hypothetical protein;protein_id=EFB91549.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 9478 9996 . + . ID=gene-HMPREF7215_2811;Name=HMPREF7215_2811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2811 GCA_000177335.1|ADFP01000031.1 Genbank CDS 9478 9996 . + 0 ID=cds-EFB91550.1;Parent=gene-HMPREF7215_2811;Dbxref=NCBI_GP:EFB91550.1;Name=EFB91550.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2811;product=hypothetical protein;protein_id=EFB91550.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 10044 10322 . - . ID=gene-HMPREF7215_2812;Name=HMPREF7215_2812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2812 GCA_000177335.1|ADFP01000031.1 Genbank CDS 10044 10322 . - 0 ID=cds-EFB91551.1;Parent=gene-HMPREF7215_2812;Dbxref=NCBI_GP:EFB91551.1;Name=EFB91551.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_2812;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91551.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 10319 10594 . - . ID=gene-HMPREF7215_2813;Name=HMPREF7215_2813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2813 GCA_000177335.1|ADFP01000031.1 Genbank CDS 10319 10594 . - 0 ID=cds-EFB91552.1;Parent=gene-HMPREF7215_2813;Dbxref=NCBI_GP:EFB91552.1;Name=EFB91552.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=HMPREF7215_2813;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91552.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 10693 11088 . + . ID=gene-HMPREF7215_2814;Name=HMPREF7215_2814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2814 GCA_000177335.1|ADFP01000031.1 Genbank CDS 10693 11088 . + 0 ID=cds-EFB91553.1;Parent=gene-HMPREF7215_2814;Dbxref=NCBI_GP:EFB91553.1;Name=EFB91553.1;Note=identified by match to protein family HMM PF08291;gbkey=CDS;locus_tag=HMPREF7215_2814;product=peptidase M15;protein_id=EFB91553.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 11091 11462 . + . ID=gene-HMPREF7215_2815;Name=HMPREF7215_2815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2815 GCA_000177335.1|ADFP01000031.1 Genbank CDS 11091 11462 . + 0 ID=cds-EFB91554.1;Parent=gene-HMPREF7215_2815;Dbxref=NCBI_GP:EFB91554.1;Name=EFB91554.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2815;product=hypothetical protein;protein_id=EFB91554.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 11449 11775 . + . ID=gene-HMPREF7215_2816;Name=HMPREF7215_2816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2816 GCA_000177335.1|ADFP01000031.1 Genbank CDS 11449 11775 . + 0 ID=cds-EFB91555.1;Parent=gene-HMPREF7215_2816;Dbxref=NCBI_GP:EFB91555.1;Name=EFB91555.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2816;product=hypothetical protein;protein_id=EFB91555.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 11798 12094 . + . ID=gene-HMPREF7215_2817;Name=HMPREF7215_2817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2817 GCA_000177335.1|ADFP01000031.1 Genbank CDS 11798 12094 . + 0 ID=cds-EFB91556.1;Parent=gene-HMPREF7215_2817;Dbxref=NCBI_GP:EFB91556.1;Name=EFB91556.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2817;product=hypothetical protein;protein_id=EFB91556.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 12300 12452 . + . ID=gene-HMPREF7215_2818;Name=HMPREF7215_2818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2818 GCA_000177335.1|ADFP01000031.1 Genbank CDS 12300 12452 . + 0 ID=cds-EFB91557.1;Parent=gene-HMPREF7215_2818;Dbxref=NCBI_GP:EFB91557.1;Name=EFB91557.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2818;product=hypothetical protein;protein_id=EFB91557.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 12442 13836 . + . ID=gene-HMPREF7215_2819;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=HMPREF7215_2819 GCA_000177335.1|ADFP01000031.1 Genbank CDS 12442 13836 . + 0 ID=cds-EFB91558.1;Parent=gene-HMPREF7215_2819;Dbxref=NCBI_GP:EFB91558.1;Name=EFB91558.1;Note=identified by match to protein family HMM PF01874%3B match to protein family HMM PF03802%3B match to protein family HMM TIGR03124%3B match to protein family HMM TIGR03125;gbkey=CDS;gene=citG;locus_tag=HMPREF7215_2819;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=EFB91558.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 13879 15261 . + . ID=gene-HMPREF7215_2820;Name=HMPREF7215_2820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2820 GCA_000177335.1|ADFP01000031.1 Genbank CDS 13879 15261 . + 0 ID=cds-EFB91559.1;Parent=gene-HMPREF7215_2820;Dbxref=NCBI_GP:EFB91559.1;Name=EFB91559.1;Note=identified by match to protein family HMM PF01871%3B match to protein family HMM PF02900;gbkey=CDS;locus_tag=HMPREF7215_2820;product=putative uncharacterized protein%2C PH0010 family;protein_id=EFB91559.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 15258 16085 . + . ID=gene-HMPREF7215_2821;Name=HMPREF7215_2821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2821 GCA_000177335.1|ADFP01000031.1 Genbank CDS 15258 16085 . + 0 ID=cds-EFB91560.1;Parent=gene-HMPREF7215_2821;Dbxref=NCBI_GP:EFB91560.1;Name=EFB91560.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF7215_2821;product=radical SAM domain protein;protein_id=EFB91560.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 16257 16439 . - . ID=gene-HMPREF7215_2822;Name=HMPREF7215_2822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2822 GCA_000177335.1|ADFP01000031.1 Genbank CDS 16257 16439 . - 0 ID=cds-EFB91561.1;Parent=gene-HMPREF7215_2822;Dbxref=NCBI_GP:EFB91561.1;Name=EFB91561.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2822;product=hypothetical protein;protein_id=EFB91561.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 16395 18527 . + . ID=gene-HMPREF7215_2823;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=HMPREF7215_2823 GCA_000177335.1|ADFP01000031.1 Genbank CDS 16395 18527 . + 0 ID=cds-EFB91562.1;Parent=gene-HMPREF7215_2823;Dbxref=NCBI_GP:EFB91562.1;Name=EFB91562.1;Note=identified by match to protein family HMM PF00120;gbkey=CDS;gene=glnA;locus_tag=HMPREF7215_2823;product=glutamate--ammonia ligase%2C catalytic domain protein;protein_id=EFB91562.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 18773 19468 . + . ID=gene-HMPREF7215_2824;Name=HMPREF7215_2824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2824 GCA_000177335.1|ADFP01000031.1 Genbank CDS 18773 19468 . + 0 ID=cds-EFB91563.1;Parent=gene-HMPREF7215_2824;Dbxref=NCBI_GP:EFB91563.1;Name=EFB91563.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF7215_2824;product=metallo-beta-lactamase domain protein;protein_id=EFB91563.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 19500 20021 . + . ID=gene-HMPREF7215_2825;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=HMPREF7215_2825 GCA_000177335.1|ADFP01000031.1 Genbank CDS 19500 20021 . + 0 ID=cds-EFB91564.1;Parent=gene-HMPREF7215_2825;Dbxref=NCBI_GP:EFB91564.1;Name=EFB91564.1;Note=identified by match to protein family HMM PF02572%3B match to protein family HMM TIGR00708;gbkey=CDS;gene=cobO;locus_tag=HMPREF7215_2825;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=EFB91564.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 20085 21833 . + . ID=gene-HMPREF7215_2826;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=HMPREF7215_2826 GCA_000177335.1|ADFP01000031.1 Genbank CDS 20085 21833 . + 0 ID=cds-EFB91565.1;Parent=gene-HMPREF7215_2826;Dbxref=NCBI_GP:EFB91565.1;Name=EFB91565.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsP;locus_tag=HMPREF7215_2826;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=EFB91565.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 22119 22406 . + . ID=gene-HMPREF7215_2827;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2827 GCA_000177335.1|ADFP01000031.1 Genbank CDS 22119 22406 . + 0 ID=cds-EFB91566.1;Parent=gene-HMPREF7215_2827;Dbxref=NCBI_GP:EFB91566.1;Name=EFB91566.1;Note=identified by match to protein family HMM PF00166;gbkey=CDS;gene=groS;locus_tag=HMPREF7215_2827;product=chaperonin GroS;protein_id=EFB91566.1;transl_table=11 GCA_000177335.1|ADFP01000031.1 Genbank gene 22449 23580 . + . ID=gene-HMPREF7215_2828;Name=groEL;end_range=23580,.;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HMPREF7215_2828;partial=true GCA_000177335.1|ADFP01000031.1 Genbank CDS 22449 23580 . + 0 ID=cds-EFB91567.1;Parent=gene-HMPREF7215_2828;Dbxref=NCBI_GP:EFB91567.1;Name=EFB91567.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00118;end_range=23580,.;gbkey=CDS;gene=groEL;locus_tag=HMPREF7215_2828;partial=true;product=chaperonin GroEL;protein_id=EFB91567.1;transl_table=11 ##sequence-region ADFP01000030.1 1 12762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000030.1 Genbank region 1 12762 . + . ID=ADFP01000030.1:1..12762;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000030.1 Genbank gene 156 773 . + . ID=gene-HMPREF7215_0404;Name=HMPREF7215_0404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0404 GCA_000177335.1|ADFP01000030.1 Genbank CDS 156 773 . + 0 ID=cds-EFB91568.1;Parent=gene-HMPREF7215_0404;Dbxref=NCBI_GP:EFB91568.1;Name=EFB91568.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF08241;gbkey=CDS;locus_tag=HMPREF7215_0404;product=methyltransferase domain protein;protein_id=EFB91568.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 1231 2505 . + . ID=gene-HMPREF7215_0405;Name=HMPREF7215_0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0405 GCA_000177335.1|ADFP01000030.1 Genbank CDS 1231 2505 . + 0 ID=cds-EFB91569.1;Parent=gene-HMPREF7215_0405;Dbxref=NCBI_GP:EFB91569.1;Name=EFB91569.1;Note=identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812;gbkey=CDS;locus_tag=HMPREF7215_0405;product=Glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein;protein_id=EFB91569.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 2589 3551 . - . ID=gene-HMPREF7215_0406;Name=HMPREF7215_0406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0406 GCA_000177335.1|ADFP01000030.1 Genbank CDS 2589 3551 . - 0 ID=cds-EFB91570.1;Parent=gene-HMPREF7215_0406;Dbxref=NCBI_GP:EFB91570.1;Name=EFB91570.1;gbkey=CDS;locus_tag=HMPREF7215_0406;product=hypothetical protein;protein_id=EFB91570.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 3759 4802 . + . ID=gene-HMPREF7215_0407;Name=HMPREF7215_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0407 GCA_000177335.1|ADFP01000030.1 Genbank CDS 3759 4802 . + 0 ID=cds-EFB91571.1;Parent=gene-HMPREF7215_0407;Dbxref=NCBI_GP:EFB91571.1;Name=EFB91571.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=HMPREF7215_0407;product=ABC transporter%2C solute-binding protein;protein_id=EFB91571.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 4908 6593 . + . ID=gene-HMPREF7215_0408;Name=HMPREF7215_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0408 GCA_000177335.1|ADFP01000030.1 Genbank CDS 4908 6593 . + 0 ID=cds-EFB91572.1;Parent=gene-HMPREF7215_0408;Dbxref=NCBI_GP:EFB91572.1;Name=EFB91572.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_0408;product=ABC transporter%2C permease protein;protein_id=EFB91572.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 6593 7690 . + . ID=gene-HMPREF7215_0409;Name=HMPREF7215_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0409 GCA_000177335.1|ADFP01000030.1 Genbank CDS 6593 7690 . + 0 ID=cds-EFB91573.1;Parent=gene-HMPREF7215_0409;Dbxref=NCBI_GP:EFB91573.1;Name=EFB91573.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;locus_tag=HMPREF7215_0409;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91573.1;transl_table=11 GCA_000177335.1|ADFP01000030.1 Genbank gene 7854 12762 . - . ID=gene-HMPREF7215_0410;Name=HMPREF7215_0410;end_range=12762,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0410;partial=true GCA_000177335.1|ADFP01000030.1 Genbank CDS 7854 12762 . - 1 ID=cds-EFB91574.1;Parent=gene-HMPREF7215_0410;Dbxref=NCBI_GP:EFB91574.1;Name=EFB91574.1;Note=identified by match to protein family HMM PF05662;end_range=12762,.;gbkey=CDS;locus_tag=HMPREF7215_0410;partial=true;product=Hep/Hag repeat protein;protein_id=EFB91574.1;transl_table=11 ##sequence-region ADFP01000029.1 1 10164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000029.1 Genbank region 1 10164 . + . ID=ADFP01000029.1:1..10164;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000029.1 Genbank gene 141 959 . + . ID=gene-HMPREF7215_1434;Name=HMPREF7215_1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1434 GCA_000177335.1|ADFP01000029.1 Genbank CDS 141 959 . + 0 ID=cds-EFB91575.1;Parent=gene-HMPREF7215_1434;Dbxref=NCBI_GP:EFB91575.1;Name=EFB91575.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1434;product=hypothetical protein;protein_id=EFB91575.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 956 1078 . - . ID=gene-HMPREF7215_1433;Name=HMPREF7215_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1433 GCA_000177335.1|ADFP01000029.1 Genbank CDS 956 1078 . - 0 ID=cds-EFB91576.1;Parent=gene-HMPREF7215_1433;Dbxref=NCBI_GP:EFB91576.1;Name=EFB91576.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1433;product=hypothetical protein;protein_id=EFB91576.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 1075 1857 . - . ID=gene-HMPREF7215_1435;Name=HMPREF7215_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1435 GCA_000177335.1|ADFP01000029.1 Genbank CDS 1075 1857 . - 0 ID=cds-EFB91577.1;Parent=gene-HMPREF7215_1435;Dbxref=NCBI_GP:EFB91577.1;Name=EFB91577.1;Note=identified by match to protein family HMM PF02900;gbkey=CDS;locus_tag=HMPREF7215_1435;product=aromatic ring-opening dioxygenase%2C catalytic subunit LigB;protein_id=EFB91577.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 2060 2680 . + . ID=gene-HMPREF7215_1436;Name=HMPREF7215_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1436 GCA_000177335.1|ADFP01000029.1 Genbank CDS 2060 2680 . + 0 ID=cds-EFB91578.1;Parent=gene-HMPREF7215_1436;Dbxref=NCBI_GP:EFB91578.1;Name=EFB91578.1;Note=identified by match to protein family HMM PF01965;gbkey=CDS;locus_tag=HMPREF7215_1436;product=DJ-1/PfpI family protein;protein_id=EFB91578.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 2758 3381 . - . ID=gene-HMPREF7215_1437;Name=HMPREF7215_1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1437 GCA_000177335.1|ADFP01000029.1 Genbank CDS 2758 3381 . - 0 ID=cds-EFB91579.1;Parent=gene-HMPREF7215_1437;Dbxref=NCBI_GP:EFB91579.1;Name=EFB91579.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;locus_tag=HMPREF7215_1437;product=HAD hydrolase%2C family IA%2C variant 3;protein_id=EFB91579.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 3466 3579 . + . ID=gene-HMPREF7215_1438;Name=HMPREF7215_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1438 GCA_000177335.1|ADFP01000029.1 Genbank CDS 3466 3579 . + 0 ID=cds-EFB91580.1;Parent=gene-HMPREF7215_1438;Dbxref=NCBI_GP:EFB91580.1;Name=EFB91580.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1438;product=hypothetical protein;protein_id=EFB91580.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 3641 3865 . + . ID=gene-HMPREF7215_1439;Name=HMPREF7215_1439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1439 GCA_000177335.1|ADFP01000029.1 Genbank CDS 3641 3865 . + 0 ID=cds-EFB91581.1;Parent=gene-HMPREF7215_1439;Dbxref=NCBI_GP:EFB91581.1;Name=EFB91581.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1439;product=hypothetical protein;protein_id=EFB91581.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 3936 5102 . + . ID=gene-HMPREF7215_1440;Name=HMPREF7215_1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1440 GCA_000177335.1|ADFP01000029.1 Genbank CDS 3936 5102 . + 0 ID=cds-EFB91582.1;Parent=gene-HMPREF7215_1440;Dbxref=NCBI_GP:EFB91582.1;Name=EFB91582.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR03526;gbkey=CDS;locus_tag=HMPREF7215_1440;product=putative selenium metabolism hydrolase;protein_id=EFB91582.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 5156 6373 . + . ID=gene-HMPREF7215_1441;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=HMPREF7215_1441 GCA_000177335.1|ADFP01000029.1 Genbank CDS 5156 6373 . + 0 ID=cds-EFB91583.1;Parent=gene-HMPREF7215_1441;Dbxref=NCBI_GP:EFB91583.1;Name=EFB91583.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01747%3B match to protein family HMM TIGR03528;gbkey=CDS;gene=dpaL;locus_tag=HMPREF7215_1441;product=diaminopropionate ammonia-lyase;protein_id=EFB91583.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 6370 6501 . + . ID=gene-HMPREF7215_1442;Name=HMPREF7215_1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1442 GCA_000177335.1|ADFP01000029.1 Genbank CDS 6370 6501 . + 0 ID=cds-EFB91584.1;Parent=gene-HMPREF7215_1442;Dbxref=NCBI_GP:EFB91584.1;Name=EFB91584.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1442;product=hypothetical protein;protein_id=EFB91584.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 6535 6903 . + . ID=gene-HMPREF7215_1443;Name=HMPREF7215_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1443 GCA_000177335.1|ADFP01000029.1 Genbank CDS 6535 6903 . + 0 ID=cds-EFB91585.1;Parent=gene-HMPREF7215_1443;Dbxref=NCBI_GP:EFB91585.1;Name=EFB91585.1;Note=identified by match to protein family HMM PF01022%3B match to protein family HMM PF08279;gbkey=CDS;locus_tag=HMPREF7215_1443;product=transcriptional regulator%2C ArsR family;protein_id=EFB91585.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 6900 7484 . + . ID=gene-HMPREF7215_1444;Name=HMPREF7215_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1444 GCA_000177335.1|ADFP01000029.1 Genbank CDS 6900 7484 . + 0 ID=cds-EFB91586.1;Parent=gene-HMPREF7215_1444;Dbxref=NCBI_GP:EFB91586.1;Name=EFB91586.1;Note=identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_1444;product=chromate transport protein;protein_id=EFB91586.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 7481 8041 . + . ID=gene-HMPREF7215_1445;Name=HMPREF7215_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1445 GCA_000177335.1|ADFP01000029.1 Genbank CDS 7481 8041 . + 0 ID=cds-EFB91587.1;Parent=gene-HMPREF7215_1445;Dbxref=NCBI_GP:EFB91587.1;Name=EFB91587.1;Note=identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_1445;product=chromate transport protein;protein_id=EFB91587.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 8169 9101 . - . ID=gene-HMPREF7215_1446;Name=HMPREF7215_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1446 GCA_000177335.1|ADFP01000029.1 Genbank CDS 8169 9101 . - 0 ID=cds-EFB91588.1;Parent=gene-HMPREF7215_1446;Dbxref=NCBI_GP:EFB91588.1;Name=EFB91588.1;Note=identified by match to protein family HMM PF09084%3B match to protein family HMM TIGR01728;gbkey=CDS;locus_tag=HMPREF7215_1446;product=ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family;protein_id=EFB91588.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 9098 9553 . - . ID=gene-HMPREF7215_1447;Name=HMPREF7215_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1447 GCA_000177335.1|ADFP01000029.1 Genbank CDS 9098 9553 . - 0 ID=cds-EFB91589.1;Parent=gene-HMPREF7215_1447;Dbxref=NCBI_GP:EFB91589.1;Name=EFB91589.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=HMPREF7215_1447;product=glyoxalase family protein;protein_id=EFB91589.1;transl_table=11 GCA_000177335.1|ADFP01000029.1 Genbank gene 9581 10144 . - . ID=gene-HMPREF7215_1448;Name=HMPREF7215_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1448 GCA_000177335.1|ADFP01000029.1 Genbank CDS 9581 10144 . - 0 ID=cds-EFB91590.1;Parent=gene-HMPREF7215_1448;Dbxref=NCBI_GP:EFB91590.1;Name=EFB91590.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1448;product=hypothetical protein;protein_id=EFB91590.1;transl_table=11 ##sequence-region ADFP01000028.1 1 25637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000028.1 Genbank region 1 25637 . + . ID=ADFP01000028.1:1..25637;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000028.1 Genbank gene 641 928 . + . ID=gene-HMPREF7215_2293;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2293 GCA_000177335.1|ADFP01000028.1 Genbank CDS 641 928 . + 0 ID=cds-EFB91591.1;Parent=gene-HMPREF7215_2293;Dbxref=NCBI_GP:EFB91591.1;Name=EFB91591.1;Note=identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166;gbkey=CDS;gene=rpsF;locus_tag=HMPREF7215_2293;product=ribosomal protein S6;protein_id=EFB91591.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 943 1518 . + . ID=gene-HMPREF7215_2294;Name=HMPREF7215_2294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2294 GCA_000177335.1|ADFP01000028.1 Genbank CDS 943 1518 . + 0 ID=cds-EFB91592.1;Parent=gene-HMPREF7215_2294;Dbxref=NCBI_GP:EFB91592.1;Name=EFB91592.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;locus_tag=HMPREF7215_2294;product=single-strand binding family protein;protein_id=EFB91592.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 1605 1853 . + . ID=gene-HMPREF7215_2295;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HMPREF7215_2295 GCA_000177335.1|ADFP01000028.1 Genbank CDS 1605 1853 . + 0 ID=cds-EFB91593.1;Parent=gene-HMPREF7215_2295;Dbxref=NCBI_GP:EFB91593.1;Name=EFB91593.1;Note=identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165;gbkey=CDS;gene=rpsR;locus_tag=HMPREF7215_2295;product=ribosomal protein S18;protein_id=EFB91593.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 1962 2915 . + . ID=gene-HMPREF7215_2296;Name=HMPREF7215_2296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2296 GCA_000177335.1|ADFP01000028.1 Genbank CDS 1962 2915 . + 0 ID=cds-EFB91594.1;Parent=gene-HMPREF7215_2296;Dbxref=NCBI_GP:EFB91594.1;Name=EFB91594.1;gbkey=CDS;locus_tag=HMPREF7215_2296;product=hypothetical protein;protein_id=EFB91594.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 2912 3361 . + . ID=gene-HMPREF7215_2297;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HMPREF7215_2297 GCA_000177335.1|ADFP01000028.1 Genbank CDS 2912 3361 . + 0 ID=cds-EFB91595.1;Parent=gene-HMPREF7215_2297;Dbxref=NCBI_GP:EFB91595.1;Name=EFB91595.1;Note=identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158;gbkey=CDS;gene=rplI;locus_tag=HMPREF7215_2297;product=ribosomal protein L9;protein_id=EFB91595.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 3366 4712 . + . ID=gene-HMPREF7215_2298;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2298 GCA_000177335.1|ADFP01000028.1 Genbank CDS 3366 4712 . + 0 ID=cds-EFB91596.1;Parent=gene-HMPREF7215_2298;Dbxref=NCBI_GP:EFB91596.1;Name=EFB91596.1;Note=identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;locus_tag=HMPREF7215_2298;product=replicative DNA helicase;protein_id=EFB91596.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 4781 6001 . - . ID=gene-HMPREF7215_2299;Name=HMPREF7215_2299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2299 GCA_000177335.1|ADFP01000028.1 Genbank CDS 4781 6001 . - 0 ID=cds-EFB91597.1;Parent=gene-HMPREF7215_2299;Dbxref=NCBI_GP:EFB91597.1;Name=EFB91597.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_2299;product=aminotransferase%2C class I/II;protein_id=EFB91597.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 6047 6160 . - . ID=gene-HMPREF7215_2300;Name=HMPREF7215_2300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2300 GCA_000177335.1|ADFP01000028.1 Genbank CDS 6047 6160 . - 0 ID=cds-EFB91598.1;Parent=gene-HMPREF7215_2300;Dbxref=NCBI_GP:EFB91598.1;Name=EFB91598.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2300;product=hypothetical protein;protein_id=EFB91598.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 6193 7656 . - . ID=gene-HMPREF7215_2301;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=HMPREF7215_2301 GCA_000177335.1|ADFP01000028.1 Genbank CDS 6193 7656 . - 0 ID=cds-EFB91599.1;Parent=gene-HMPREF7215_2301;Dbxref=NCBI_GP:EFB91599.1;Name=EFB91599.1;Note=identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02119%3B overlaps another CDS with the same product name;gbkey=CDS;gene=panF;locus_tag=HMPREF7215_2301;product=sodium/pantothenate symporter;protein_id=EFB91599.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 7649 7930 . - . ID=gene-HMPREF7215_2302;Name=HMPREF7215_2302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2302 GCA_000177335.1|ADFP01000028.1 Genbank CDS 7649 7930 . - 0 ID=cds-EFB91600.1;Parent=gene-HMPREF7215_2302;Dbxref=NCBI_GP:EFB91600.1;Name=EFB91600.1;Note=identified by match to protein family HMM PF06196%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_2302;product=hypothetical protein;protein_id=EFB91600.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 8158 8388 . - . ID=gene-HMPREF7215_2303;Name=HMPREF7215_2303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2303 GCA_000177335.1|ADFP01000028.1 Genbank CDS 8158 8388 . - 0 ID=cds-EFB91601.1;Parent=gene-HMPREF7215_2303;Dbxref=NCBI_GP:EFB91601.1;Name=EFB91601.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2303;product=hypothetical protein;protein_id=EFB91601.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 8429 9760 . - . ID=gene-HMPREF7215_2304;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=HMPREF7215_2304 GCA_000177335.1|ADFP01000028.1 Genbank CDS 8429 9760 . - 0 ID=cds-EFB91602.1;Parent=gene-HMPREF7215_2304;Dbxref=NCBI_GP:EFB91602.1;Name=EFB91602.1;Note=identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ;locus_tag=HMPREF7215_2304;product=branched-chain amino acid transport system II carrier protein;protein_id=EFB91602.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 10037 11242 . - . ID=gene-HMPREF7215_2305;Name=HMPREF7215_2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2305 GCA_000177335.1|ADFP01000028.1 Genbank CDS 10037 11242 . - 0 ID=cds-EFB91603.1;Parent=gene-HMPREF7215_2305;Dbxref=NCBI_GP:EFB91603.1;Name=EFB91603.1;gbkey=CDS;locus_tag=HMPREF7215_2305;product=hypothetical protein;protein_id=EFB91603.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 11323 11802 . - . ID=gene-HMPREF7215_2306;Name=HMPREF7215_2306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2306 GCA_000177335.1|ADFP01000028.1 Genbank CDS 11323 11802 . - 0 ID=cds-EFB91604.1;Parent=gene-HMPREF7215_2306;Dbxref=NCBI_GP:EFB91604.1;Name=EFB91604.1;gbkey=CDS;locus_tag=HMPREF7215_2306;product=hypothetical protein;protein_id=EFB91604.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 11901 13133 . - . ID=gene-HMPREF7215_2307;Name=HMPREF7215_2307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2307 GCA_000177335.1|ADFP01000028.1 Genbank CDS 11901 13133 . - 0 ID=cds-EFB91605.1;Parent=gene-HMPREF7215_2307;Dbxref=NCBI_GP:EFB91605.1;Name=EFB91605.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_2307;product=aminotransferase%2C class I/II;protein_id=EFB91605.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 13089 13403 . + . ID=gene-HMPREF7215_2308;Name=HMPREF7215_2308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2308 GCA_000177335.1|ADFP01000028.1 Genbank CDS 13089 13403 . + 0 ID=cds-EFB91606.1;Parent=gene-HMPREF7215_2308;Dbxref=NCBI_GP:EFB91606.1;Name=EFB91606.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2308;product=hypothetical protein;protein_id=EFB91606.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 13379 13507 . + . ID=gene-HMPREF7215_2309;Name=HMPREF7215_2309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2309 GCA_000177335.1|ADFP01000028.1 Genbank CDS 13379 13507 . + 0 ID=cds-EFB91607.1;Parent=gene-HMPREF7215_2309;Dbxref=NCBI_GP:EFB91607.1;Name=EFB91607.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2309;product=hypothetical protein;protein_id=EFB91607.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 13538 13732 . + . ID=gene-HMPREF7215_2310;Name=HMPREF7215_2310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2310 GCA_000177335.1|ADFP01000028.1 Genbank CDS 13538 13732 . + 0 ID=cds-EFB91608.1;Parent=gene-HMPREF7215_2310;Dbxref=NCBI_GP:EFB91608.1;Name=EFB91608.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2310;product=hypothetical protein;protein_id=EFB91608.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 13725 14798 . + . ID=gene-HMPREF7215_2311;Name=hydE;gbkey=Gene;gene=hydE;gene_biotype=protein_coding;locus_tag=HMPREF7215_2311 GCA_000177335.1|ADFP01000028.1 Genbank CDS 13725 14798 . + 0 ID=cds-EFB91609.1;Parent=gene-HMPREF7215_2311;Dbxref=NCBI_GP:EFB91609.1;Name=EFB91609.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;gene=hydE;locus_tag=HMPREF7215_2311;product=iron-only hydrogenase maturation rSAM protein HydE;protein_id=EFB91609.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 14856 16661 . - . ID=gene-HMPREF7215_2312;Name=HMPREF7215_2312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2312 GCA_000177335.1|ADFP01000028.1 Genbank CDS 14856 16661 . - 0 ID=cds-EFB91610.1;Parent=gene-HMPREF7215_2312;Dbxref=NCBI_GP:EFB91610.1;Name=EFB91610.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;locus_tag=HMPREF7215_2312;product=O-antigen polymerase;protein_id=EFB91610.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 16861 18309 . + . ID=gene-HMPREF7215_2313;Name=HMPREF7215_2313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2313 GCA_000177335.1|ADFP01000028.1 Genbank CDS 16861 18309 . + 0 ID=cds-EFB91611.1;Parent=gene-HMPREF7215_2313;Dbxref=NCBI_GP:EFB91611.1;Name=EFB91611.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2313;product=hypothetical protein;protein_id=EFB91611.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 18303 18998 . + . ID=gene-HMPREF7215_2314;Name=HMPREF7215_2314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2314 GCA_000177335.1|ADFP01000028.1 Genbank CDS 18303 18998 . + 0 ID=cds-EFB91612.1;Parent=gene-HMPREF7215_2314;Dbxref=NCBI_GP:EFB91612.1;Name=EFB91612.1;Note=identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044;gbkey=CDS;locus_tag=HMPREF7215_2314;product=pyridoxal phosphate enzyme%2C YggS family;protein_id=EFB91612.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 19011 19628 . + . ID=gene-HMPREF7215_2315;Name=HMPREF7215_2315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2315 GCA_000177335.1|ADFP01000028.1 Genbank CDS 19011 19628 . + 0 ID=cds-EFB91613.1;Parent=gene-HMPREF7215_2315;Dbxref=NCBI_GP:EFB91613.1;Name=EFB91613.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2315;product=hypothetical protein;protein_id=EFB91613.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 19632 20105 . + . ID=gene-HMPREF7215_2316;Name=HMPREF7215_2316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2316 GCA_000177335.1|ADFP01000028.1 Genbank CDS 19632 20105 . + 0 ID=cds-EFB91614.1;Parent=gene-HMPREF7215_2316;Dbxref=NCBI_GP:EFB91614.1;Name=EFB91614.1;Note=identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544;gbkey=CDS;locus_tag=HMPREF7215_2316;product=DivIVA domain protein;protein_id=EFB91614.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 20102 22186 . + . ID=gene-HMPREF7215_2317;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=HMPREF7215_2317 GCA_000177335.1|ADFP01000028.1 Genbank CDS 20102 22186 . + 0 ID=cds-EFB91615.1;Parent=gene-HMPREF7215_2317;Dbxref=NCBI_GP:EFB91615.1;Name=EFB91615.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00643;gbkey=CDS;gene=recG;locus_tag=HMPREF7215_2317;product=ATP-dependent DNA helicase RecG;protein_id=EFB91615.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 22186 22704 . + . ID=gene-HMPREF7215_2318;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=HMPREF7215_2318 GCA_000177335.1|ADFP01000028.1 Genbank CDS 22186 22704 . + 0 ID=cds-EFB91616.1;Parent=gene-HMPREF7215_2318;Dbxref=NCBI_GP:EFB91616.1;Name=EFB91616.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02631;gbkey=CDS;gene=recX;locus_tag=HMPREF7215_2318;product=regulatory protein RecX;protein_id=EFB91616.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 23020 24552 . + . ID=gene-HMPREF7215_2319;Name=HMPREF7215_2319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2319 GCA_000177335.1|ADFP01000028.1 Genbank CDS 23020 24552 . + 0 ID=cds-EFB91617.1;Parent=gene-HMPREF7215_2319;Dbxref=NCBI_GP:EFB91617.1;Name=EFB91617.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319;gbkey=CDS;locus_tag=HMPREF7215_2319;product=YmdA/YtgF family protein;protein_id=EFB91617.1;transl_table=11 GCA_000177335.1|ADFP01000028.1 Genbank gene 24562 25368 . + . ID=gene-HMPREF7215_2320;Name=HMPREF7215_2320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2320 GCA_000177335.1|ADFP01000028.1 Genbank CDS 24562 25368 . + 0 ID=cds-EFB91618.1;Parent=gene-HMPREF7215_2320;Dbxref=NCBI_GP:EFB91618.1;Name=EFB91618.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00282;gbkey=CDS;locus_tag=HMPREF7215_2320;product=putative metallophosphoesterase;protein_id=EFB91618.1;transl_table=11 ##sequence-region ADFP01000027.1 1 3286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000027.1 Genbank region 1 3286 . + . ID=ADFP01000027.1:1..3286;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000027.1 Genbank gene 1 506 . + . ID=gene-HMPREF7215_2829;Name=HMPREF7215_2829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2829;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000027.1 Genbank CDS 1 506 . + 2 ID=cds-EFB91619.1;Parent=gene-HMPREF7215_2829;Dbxref=NCBI_GP:EFB91619.1;Name=EFB91619.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2829;partial=true;product=hypothetical protein;protein_id=EFB91619.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000027.1 Genbank gene 655 2871 . - . ID=gene-HMPREF7215_2830;Name=HMPREF7215_2830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2830 GCA_000177335.1|ADFP01000027.1 Genbank CDS 655 2871 . - 0 ID=cds-EFB91620.1;Parent=gene-HMPREF7215_2830;Dbxref=NCBI_GP:EFB91620.1;Name=EFB91620.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;locus_tag=HMPREF7215_2830;product=penicillin-binding protein%2C 1A family;protein_id=EFB91620.1;transl_table=11 GCA_000177335.1|ADFP01000027.1 Genbank gene 2957 3172 . + . ID=gene-HMPREF7215_2831;Name=HMPREF7215_2831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2831 GCA_000177335.1|ADFP01000027.1 Genbank CDS 2957 3172 . + 0 ID=cds-EFB91621.1;Parent=gene-HMPREF7215_2831;Dbxref=NCBI_GP:EFB91621.1;Name=EFB91621.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2831;product=hypothetical protein;protein_id=EFB91621.1;transl_table=11 ##sequence-region ADFP01000026.1 1 1096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000026.1 Genbank region 1 1096 . + . ID=ADFP01000026.1:1..1096;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000026.1 Genbank gene 1 348 . + . ID=gene-HMPREF7215_0742;Name=HMPREF7215_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0742;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000026.1 Genbank CDS 1 348 . + 0 ID=cds-EFB91622.1;Parent=gene-HMPREF7215_0742;Dbxref=NCBI_GP:EFB91622.1;Name=EFB91622.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0742;partial=true;product=hypothetical protein;protein_id=EFB91622.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000026.1 Genbank gene 411 1088 . - . ID=gene-HMPREF7215_0743;Name=HMPREF7215_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0743 GCA_000177335.1|ADFP01000026.1 Genbank CDS 411 1088 . - 0 ID=cds-EFB91623.1;Parent=gene-HMPREF7215_0743;Dbxref=NCBI_GP:EFB91623.1;Name=EFB91623.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0743;product=hypothetical protein;protein_id=EFB91623.1;transl_table=11 ##sequence-region ADFP01000025.1 1 7578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000025.1 Genbank region 1 7578 . + . ID=ADFP01000025.1:1..7578;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000025.1 Genbank gene 53 1117 . + . ID=gene-HMPREF7215_1493;Name=HMPREF7215_1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1493 GCA_000177335.1|ADFP01000025.1 Genbank CDS 53 1117 . + 0 ID=cds-EFB91624.1;Parent=gene-HMPREF7215_1493;Dbxref=NCBI_GP:EFB91624.1;Name=EFB91624.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1493;product=ABC transporter%2C permease protein;protein_id=EFB91624.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 1118 2047 . + . ID=gene-HMPREF7215_1494;Name=HMPREF7215_1494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1494 GCA_000177335.1|ADFP01000025.1 Genbank CDS 1118 2047 . + 0 ID=cds-EFB91625.1;Parent=gene-HMPREF7215_1494;Dbxref=NCBI_GP:EFB91625.1;Name=EFB91625.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1494;product=ABC transporter%2C permease protein;protein_id=EFB91625.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 2056 3051 . + . ID=gene-HMPREF7215_1495;Name=HMPREF7215_1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1495 GCA_000177335.1|ADFP01000025.1 Genbank CDS 2056 3051 . + 0 ID=cds-EFB91626.1;Parent=gene-HMPREF7215_1495;Dbxref=NCBI_GP:EFB91626.1;Name=EFB91626.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1495;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91626.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 3006 3218 . + . ID=gene-HMPREF7215_1496;Name=HMPREF7215_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1496 GCA_000177335.1|ADFP01000025.1 Genbank CDS 3006 3218 . + 0 ID=cds-EFB91627.1;Parent=gene-HMPREF7215_1496;Dbxref=NCBI_GP:EFB91627.1;Name=EFB91627.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1496;product=hypothetical protein;protein_id=EFB91627.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 3240 4334 . + . ID=gene-HMPREF7215_1497;Name=HMPREF7215_1497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1497 GCA_000177335.1|ADFP01000025.1 Genbank CDS 3240 4334 . + 0 ID=cds-EFB91628.1;Parent=gene-HMPREF7215_1497;Dbxref=NCBI_GP:EFB91628.1;Name=EFB91628.1;gbkey=CDS;locus_tag=HMPREF7215_1497;product=hypothetical protein;protein_id=EFB91628.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 4402 4530 . + . ID=gene-HMPREF7215_1498;Name=HMPREF7215_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1498 GCA_000177335.1|ADFP01000025.1 Genbank CDS 4402 4530 . + 0 ID=cds-EFB91629.1;Parent=gene-HMPREF7215_1498;Dbxref=NCBI_GP:EFB91629.1;Name=EFB91629.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1498;product=hypothetical protein;protein_id=EFB91629.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 4545 5642 . + . ID=gene-HMPREF7215_1499;Name=HMPREF7215_1499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1499 GCA_000177335.1|ADFP01000025.1 Genbank CDS 4545 5642 . + 0 ID=cds-EFB91630.1;Parent=gene-HMPREF7215_1499;Dbxref=NCBI_GP:EFB91630.1;Name=EFB91630.1;gbkey=CDS;locus_tag=HMPREF7215_1499;product=hypothetical protein;protein_id=EFB91630.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 5712 6554 . + . ID=gene-HMPREF7215_1500;Name=HMPREF7215_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1500 GCA_000177335.1|ADFP01000025.1 Genbank CDS 5712 6554 . + 0 ID=cds-EFB91631.1;Parent=gene-HMPREF7215_1500;Dbxref=NCBI_GP:EFB91631.1;Name=EFB91631.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1500;product=ABC transporter%2C permease protein;protein_id=EFB91631.1;transl_table=11 GCA_000177335.1|ADFP01000025.1 Genbank gene 6551 7342 . + . ID=gene-HMPREF7215_1501;Name=HMPREF7215_1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1501 GCA_000177335.1|ADFP01000025.1 Genbank CDS 6551 7342 . + 0 ID=cds-EFB91632.1;Parent=gene-HMPREF7215_1501;Dbxref=NCBI_GP:EFB91632.1;Name=EFB91632.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1501;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91632.1;transl_table=11 ##sequence-region ADFP01000024.1 1 42940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000024.1 Genbank region 1 42940 . + . ID=ADFP01000024.1:1..42940;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000024.1 Genbank gene 1 421 . + . ID=gene-HMPREF7215_2016;Name=HMPREF7215_2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2016;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000024.1 Genbank CDS 1 421 . + 1 ID=cds-EFB91633.1;Parent=gene-HMPREF7215_2016;Dbxref=NCBI_GP:EFB91633.1;Name=EFB91633.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_2016;partial=true;product=hypothetical protein;protein_id=EFB91633.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 423 1178 . + . ID=gene-HMPREF7215_2017;Name=HMPREF7215_2017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2017 GCA_000177335.1|ADFP01000024.1 Genbank CDS 423 1178 . + 0 ID=cds-EFB91634.1;Parent=gene-HMPREF7215_2017;Dbxref=NCBI_GP:EFB91634.1;Name=EFB91634.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2017;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91634.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 1172 2002 . + . ID=gene-HMPREF7215_2018;Name=HMPREF7215_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2018 GCA_000177335.1|ADFP01000024.1 Genbank CDS 1172 2002 . + 0 ID=cds-EFB91635.1;Parent=gene-HMPREF7215_2018;Dbxref=NCBI_GP:EFB91635.1;Name=EFB91635.1;Note=identified by match to protein family HMM PF00950;gbkey=CDS;locus_tag=HMPREF7215_2018;product=ABC 3 transport family protein;protein_id=EFB91635.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 2025 2636 . + . ID=gene-HMPREF7215_2019;Name=HMPREF7215_2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2019 GCA_000177335.1|ADFP01000024.1 Genbank CDS 2025 2636 . + 0 ID=cds-EFB91636.1;Parent=gene-HMPREF7215_2019;Dbxref=NCBI_GP:EFB91636.1;Name=EFB91636.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2019;product=hypothetical protein;protein_id=EFB91636.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 2728 3573 . - . ID=gene-HMPREF7215_2020;Name=HMPREF7215_2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2020 GCA_000177335.1|ADFP01000024.1 Genbank CDS 2728 3573 . - 0 ID=cds-EFB91637.1;Parent=gene-HMPREF7215_2020;Dbxref=NCBI_GP:EFB91637.1;Name=EFB91637.1;Note=identified by match to protein family HMM PF04909;gbkey=CDS;locus_tag=HMPREF7215_2020;product=amidohydrolase family protein;protein_id=EFB91637.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 3662 4915 . - . ID=gene-HMPREF7215_2021;Name=HMPREF7215_2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2021 GCA_000177335.1|ADFP01000024.1 Genbank CDS 3662 4915 . - 0 ID=cds-EFB91638.1;Parent=gene-HMPREF7215_2021;Dbxref=NCBI_GP:EFB91638.1;Name=EFB91638.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;locus_tag=HMPREF7215_2021;product=citrate transporter;protein_id=EFB91638.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 4948 5646 . - . ID=gene-HMPREF7215_2022;Name=HMPREF7215_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2022 GCA_000177335.1|ADFP01000024.1 Genbank CDS 4948 5646 . - 0 ID=cds-EFB91639.1;Parent=gene-HMPREF7215_2022;Dbxref=NCBI_GP:EFB91639.1;Name=EFB91639.1;Note=identified by match to protein family HMM PF03737;gbkey=CDS;locus_tag=HMPREF7215_2022;product=demethylmenaquinone methyltransferase;protein_id=EFB91639.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 5716 7236 . - . ID=gene-HMPREF7215_2023;Name=HMPREF7215_2023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2023 GCA_000177335.1|ADFP01000024.1 Genbank CDS 5716 7236 . - 0 ID=cds-EFB91640.1;Parent=gene-HMPREF7215_2023;Dbxref=NCBI_GP:EFB91640.1;Name=EFB91640.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_2023;product=membrane protein;protein_id=EFB91640.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 7252 7686 . - . ID=gene-HMPREF7215_2024;Name=HMPREF7215_2024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2024 GCA_000177335.1|ADFP01000024.1 Genbank CDS 7252 7686 . - 0 ID=cds-EFB91641.1;Parent=gene-HMPREF7215_2024;Dbxref=NCBI_GP:EFB91641.1;Name=EFB91641.1;gbkey=CDS;locus_tag=HMPREF7215_2024;product=hypothetical protein;protein_id=EFB91641.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 7762 8730 . - . ID=gene-HMPREF7215_2025;Name=HMPREF7215_2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2025 GCA_000177335.1|ADFP01000024.1 Genbank CDS 7762 8730 . - 0 ID=cds-EFB91642.1;Parent=gene-HMPREF7215_2025;Dbxref=NCBI_GP:EFB91642.1;Name=EFB91642.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_2025;product=hypothetical protein;protein_id=EFB91642.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 8806 9705 . - . ID=gene-HMPREF7215_2026;Name=HMPREF7215_2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2026 GCA_000177335.1|ADFP01000024.1 Genbank CDS 8806 9705 . - 0 ID=cds-EFB91643.1;Parent=gene-HMPREF7215_2026;Dbxref=NCBI_GP:EFB91643.1;Name=EFB91643.1;Note=identified by match to protein family HMM PF03446;gbkey=CDS;locus_tag=HMPREF7215_2026;product=phosphogluconate dehydrogenase (decarboxylating)%2C NAD binding domain protein;protein_id=EFB91643.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 9867 10004 . + . ID=gene-HMPREF7215_2028;Name=HMPREF7215_2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2028 GCA_000177335.1|ADFP01000024.1 Genbank CDS 9867 10004 . + 0 ID=cds-EFB91644.1;Parent=gene-HMPREF7215_2028;Dbxref=NCBI_GP:EFB91644.1;Name=EFB91644.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2028;product=hypothetical protein;protein_id=EFB91644.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 9958 10251 . - . ID=gene-HMPREF7215_2027;Name=HMPREF7215_2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2027 GCA_000177335.1|ADFP01000024.1 Genbank CDS 9958 10251 . - 0 ID=cds-EFB91645.1;Parent=gene-HMPREF7215_2027;Dbxref=NCBI_GP:EFB91645.1;Name=EFB91645.1;gbkey=CDS;locus_tag=HMPREF7215_2027;product=hypothetical protein;protein_id=EFB91645.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 10248 10943 . - . ID=gene-HMPREF7215_2029;Name=HMPREF7215_2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2029 GCA_000177335.1|ADFP01000024.1 Genbank CDS 10248 10943 . - 0 ID=cds-EFB91646.1;Parent=gene-HMPREF7215_2029;Dbxref=NCBI_GP:EFB91646.1;Name=EFB91646.1;gbkey=CDS;locus_tag=HMPREF7215_2029;product=hypothetical protein;protein_id=EFB91646.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 10983 11513 . - . ID=gene-HMPREF7215_2030;Name=HMPREF7215_2030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2030 GCA_000177335.1|ADFP01000024.1 Genbank CDS 10983 11513 . - 0 ID=cds-EFB91647.1;Parent=gene-HMPREF7215_2030;Dbxref=NCBI_GP:EFB91647.1;Name=EFB91647.1;Note=identified by match to protein family HMM PF07456;gbkey=CDS;locus_tag=HMPREF7215_2030;product=heptaprenyl diphosphate synthase component I;protein_id=EFB91647.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 11523 11882 . - . ID=gene-HMPREF7215_2031;Name=HMPREF7215_2031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2031 GCA_000177335.1|ADFP01000024.1 Genbank CDS 11523 11882 . - 0 ID=cds-EFB91648.1;Parent=gene-HMPREF7215_2031;Dbxref=NCBI_GP:EFB91648.1;Name=EFB91648.1;Note=identified by match to protein family HMM PF07009;gbkey=CDS;locus_tag=HMPREF7215_2031;product=hypothetical protein;protein_id=EFB91648.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 11879 12907 . - . ID=gene-HMPREF7215_2032;Name=HMPREF7215_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2032 GCA_000177335.1|ADFP01000024.1 Genbank CDS 11879 12907 . - 0 ID=cds-EFB91649.1;Parent=gene-HMPREF7215_2032;Dbxref=NCBI_GP:EFB91649.1;Name=EFB91649.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;locus_tag=HMPREF7215_2032;product=ApbE family protein;protein_id=EFB91649.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 13220 13816 . + . ID=gene-HMPREF7215_2033;Name=HMPREF7215_2033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2033 GCA_000177335.1|ADFP01000024.1 Genbank CDS 13220 13816 . + 0 ID=cds-EFB91650.1;Parent=gene-HMPREF7215_2033;Dbxref=NCBI_GP:EFB91650.1;Name=EFB91650.1;gbkey=CDS;locus_tag=HMPREF7215_2033;product=hypothetical protein;protein_id=EFB91650.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 14182 15654 . + . ID=gene-HMPREF7215_2034;Name=HMPREF7215_2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2034 GCA_000177335.1|ADFP01000024.1 Genbank CDS 14182 15654 . + 0 ID=cds-EFB91651.1;Parent=gene-HMPREF7215_2034;Dbxref=NCBI_GP:EFB91651.1;Name=EFB91651.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;locus_tag=HMPREF7215_2034;product=Sodium:neurotransmitter symporter family protein;protein_id=EFB91651.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 15755 16048 . - . ID=gene-HMPREF7215_2035;Name=HMPREF7215_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2035 GCA_000177335.1|ADFP01000024.1 Genbank CDS 15755 16048 . - 0 ID=cds-EFB91652.1;Parent=gene-HMPREF7215_2035;Dbxref=NCBI_GP:EFB91652.1;Name=EFB91652.1;gbkey=CDS;locus_tag=HMPREF7215_2035;product=hypothetical protein;protein_id=EFB91652.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 16152 17261 . + . ID=gene-HMPREF7215_2036;Name=HMPREF7215_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2036 GCA_000177335.1|ADFP01000024.1 Genbank CDS 16152 17261 . + 0 ID=cds-EFB91653.1;Parent=gene-HMPREF7215_2036;Dbxref=NCBI_GP:EFB91653.1;Name=EFB91653.1;Note=identified by match to protein family HMM PF01168;gbkey=CDS;locus_tag=HMPREF7215_2036;product=alanine racemase domain protein;protein_id=EFB91653.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 17464 18156 . - . ID=gene-HMPREF7215_2037;Name=HMPREF7215_2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2037 GCA_000177335.1|ADFP01000024.1 Genbank CDS 17464 18156 . - 0 ID=cds-EFB91654.1;Parent=gene-HMPREF7215_2037;Dbxref=NCBI_GP:EFB91654.1;Name=EFB91654.1;gbkey=CDS;locus_tag=HMPREF7215_2037;product=hypothetical protein;protein_id=EFB91654.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 18238 18393 . - . ID=gene-HMPREF7215_2038;Name=HMPREF7215_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2038 GCA_000177335.1|ADFP01000024.1 Genbank CDS 18238 18393 . - 0 ID=cds-EFB91655.1;Parent=gene-HMPREF7215_2038;Dbxref=NCBI_GP:EFB91655.1;Name=EFB91655.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2038;product=hypothetical protein;protein_id=EFB91655.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 18384 20741 . - . ID=gene-HMPREF7215_2039;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2039 GCA_000177335.1|ADFP01000024.1 Genbank CDS 18384 20741 . - 0 ID=cds-EFB91656.1;Parent=gene-HMPREF7215_2039;Dbxref=NCBI_GP:EFB91656.1;Name=EFB91656.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF04023%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00437;gbkey=CDS;gene=feoB;locus_tag=HMPREF7215_2039;product=ferrous iron transport protein B;protein_id=EFB91656.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 20780 20908 . + . ID=gene-HMPREF7215_2040;Name=HMPREF7215_2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2040 GCA_000177335.1|ADFP01000024.1 Genbank CDS 20780 20908 . + 0 ID=cds-EFB91657.1;Parent=gene-HMPREF7215_2040;Dbxref=NCBI_GP:EFB91657.1;Name=EFB91657.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2040;product=hypothetical protein;protein_id=EFB91657.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 20912 21040 . - . ID=gene-HMPREF7215_2041;Name=HMPREF7215_2041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2041 GCA_000177335.1|ADFP01000024.1 Genbank CDS 20912 21040 . - 0 ID=cds-EFB91658.1;Parent=gene-HMPREF7215_2041;Dbxref=NCBI_GP:EFB91658.1;Name=EFB91658.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2041;product=hypothetical protein;protein_id=EFB91658.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 21042 21836 . + . ID=gene-HMPREF7215_2042;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=HMPREF7215_2042 GCA_000177335.1|ADFP01000024.1 Genbank CDS 21042 21836 . + 0 ID=cds-EFB91659.1;Parent=gene-HMPREF7215_2042;Dbxref=NCBI_GP:EFB91659.1;Name=EFB91659.1;Note=identified by match to protein family HMM PF01427;gbkey=CDS;gene=ddpX;locus_tag=HMPREF7215_2042;product=D-Ala-D-Ala dipeptidase;protein_id=EFB91659.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 22019 23524 . - . ID=gene-HMPREF7215_2043;Name=HMPREF7215_2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2043 GCA_000177335.1|ADFP01000024.1 Genbank CDS 22019 23524 . - 0 ID=cds-EFB91660.1;Parent=gene-HMPREF7215_2043;Dbxref=NCBI_GP:EFB91660.1;Name=EFB91660.1;Note=identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571;gbkey=CDS;locus_tag=HMPREF7215_2043;product=inosine 5-monophosphate dehydrogenase;protein_id=EFB91660.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 23495 23776 . + . ID=gene-HMPREF7215_2044;Name=HMPREF7215_2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2044 GCA_000177335.1|ADFP01000024.1 Genbank CDS 23495 23776 . + 0 ID=cds-EFB91661.1;Parent=gene-HMPREF7215_2044;Dbxref=NCBI_GP:EFB91661.1;Name=EFB91661.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2044;product=hypothetical protein;protein_id=EFB91661.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 23952 24857 . - . ID=gene-HMPREF7215_2045;Name=HMPREF7215_2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2045 GCA_000177335.1|ADFP01000024.1 Genbank CDS 23952 24857 . - 0 ID=cds-EFB91662.1;Parent=gene-HMPREF7215_2045;Dbxref=NCBI_GP:EFB91662.1;Name=EFB91662.1;gbkey=CDS;locus_tag=HMPREF7215_2045;product=hypothetical protein;protein_id=EFB91662.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 24844 25656 . - . ID=gene-HMPREF7215_2046;Name=HMPREF7215_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2046 GCA_000177335.1|ADFP01000024.1 Genbank CDS 24844 25656 . - 0 ID=cds-EFB91663.1;Parent=gene-HMPREF7215_2046;Dbxref=NCBI_GP:EFB91663.1;Name=EFB91663.1;Note=identified by match to protein family HMM PF01661;gbkey=CDS;locus_tag=HMPREF7215_2046;product=macro domain protein;protein_id=EFB91663.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 25889 26059 . - . ID=gene-HMPREF7215_2047;Name=HMPREF7215_2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2047 GCA_000177335.1|ADFP01000024.1 Genbank CDS 25889 26059 . - 0 ID=cds-EFB91664.1;Parent=gene-HMPREF7215_2047;Dbxref=NCBI_GP:EFB91664.1;Name=EFB91664.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2047;product=hypothetical protein;protein_id=EFB91664.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 26058 27149 . + . ID=gene-HMPREF7215_2048;Name=HMPREF7215_2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2048 GCA_000177335.1|ADFP01000024.1 Genbank CDS 26058 27149 . + 0 ID=cds-EFB91665.1;Parent=gene-HMPREF7215_2048;Dbxref=NCBI_GP:EFB91665.1;Name=EFB91665.1;Note=identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746;gbkey=CDS;locus_tag=HMPREF7215_2048;product=mandelate racemase/muconate lactonizing enzyme%2C C-terminal domain protein;protein_id=EFB91665.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 27182 27856 . + . ID=gene-HMPREF7215_2049;Name=HMPREF7215_2049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2049 GCA_000177335.1|ADFP01000024.1 Genbank CDS 27182 27856 . + 0 ID=cds-EFB91666.1;Parent=gene-HMPREF7215_2049;Dbxref=NCBI_GP:EFB91666.1;Name=EFB91666.1;Note=identified by match to protein family HMM PF05401%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF7215_2049;product=methyltransferase domain protein;protein_id=EFB91666.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 27931 29109 . + . ID=gene-HMPREF7215_2050;Name=HMPREF7215_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2050 GCA_000177335.1|ADFP01000024.1 Genbank CDS 27931 29109 . + 0 ID=cds-EFB91667.1;Parent=gene-HMPREF7215_2050;Dbxref=NCBI_GP:EFB91667.1;Name=EFB91667.1;Note=identified by match to protein family HMM PF05684;gbkey=CDS;locus_tag=HMPREF7215_2050;product=hypothetical protein;protein_id=EFB91667.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 29177 30568 . + . ID=gene-HMPREF7215_2051;Name=HMPREF7215_2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2051 GCA_000177335.1|ADFP01000024.1 Genbank CDS 29177 30568 . + 0 ID=cds-EFB91668.1;Parent=gene-HMPREF7215_2051;Dbxref=NCBI_GP:EFB91668.1;Name=EFB91668.1;Note=identified by match to protein family HMM PF01841;gbkey=CDS;locus_tag=HMPREF7215_2051;product=transglutaminase-like protein;protein_id=EFB91668.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 30836 32269 . + . ID=gene-HMPREF7215_2052;Name=HMPREF7215_2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2052 GCA_000177335.1|ADFP01000024.1 Genbank CDS 30836 32269 . + 0 ID=cds-EFB91669.1;Parent=gene-HMPREF7215_2052;Dbxref=NCBI_GP:EFB91669.1;Name=EFB91669.1;gbkey=CDS;locus_tag=HMPREF7215_2052;product=lipoprotein%2C NLP/P60 family;protein_id=EFB91669.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 32421 32867 . - . ID=gene-HMPREF7215_2053;Name=HMPREF7215_2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2053 GCA_000177335.1|ADFP01000024.1 Genbank CDS 32421 32867 . - 0 ID=cds-EFB91670.1;Parent=gene-HMPREF7215_2053;Dbxref=NCBI_GP:EFB91670.1;Name=EFB91670.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=HMPREF7215_2053;product=acetyltransferase%2C GNAT family;protein_id=EFB91670.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 32988 33467 . - . ID=gene-HMPREF7215_2054;Name=HMPREF7215_2054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2054 GCA_000177335.1|ADFP01000024.1 Genbank CDS 32988 33467 . - 0 ID=cds-EFB91671.1;Parent=gene-HMPREF7215_2054;Dbxref=NCBI_GP:EFB91671.1;Name=EFB91671.1;Note=identified by match to protein family HMM PF02525;gbkey=CDS;locus_tag=HMPREF7215_2054;product=flavodoxin-like protein;protein_id=EFB91671.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 33606 33773 . - . ID=gene-HMPREF7215_2055;Name=HMPREF7215_2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2055 GCA_000177335.1|ADFP01000024.1 Genbank CDS 33606 33773 . - 0 ID=cds-EFB91672.1;Parent=gene-HMPREF7215_2055;Dbxref=NCBI_GP:EFB91672.1;Name=EFB91672.1;gbkey=CDS;locus_tag=HMPREF7215_2055;product=hypothetical protein;protein_id=EFB91672.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 33838 34086 . - . ID=gene-HMPREF7215_2056;Name=HMPREF7215_2056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2056 GCA_000177335.1|ADFP01000024.1 Genbank CDS 33838 34086 . - 0 ID=cds-EFB91673.1;Parent=gene-HMPREF7215_2056;Dbxref=NCBI_GP:EFB91673.1;Name=EFB91673.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2056;product=hypothetical protein;protein_id=EFB91673.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 34201 35088 . + . ID=gene-HMPREF7215_2057;Name=HMPREF7215_2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2057 GCA_000177335.1|ADFP01000024.1 Genbank CDS 34201 35088 . + 0 ID=cds-EFB91674.1;Parent=gene-HMPREF7215_2057;Dbxref=NCBI_GP:EFB91674.1;Name=EFB91674.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2057;product=transcriptional regulator%2C LysR family;protein_id=EFB91674.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 35115 35246 . + . ID=gene-HMPREF7215_2058;Name=HMPREF7215_2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2058 GCA_000177335.1|ADFP01000024.1 Genbank CDS 35115 35246 . + 0 ID=cds-EFB91675.1;Parent=gene-HMPREF7215_2058;Dbxref=NCBI_GP:EFB91675.1;Name=EFB91675.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2058;product=hypothetical protein;protein_id=EFB91675.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 35337 35492 . - . ID=gene-HMPREF7215_2059;Name=HMPREF7215_2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2059 GCA_000177335.1|ADFP01000024.1 Genbank CDS 35337 35492 . - 0 ID=cds-EFB91676.1;Parent=gene-HMPREF7215_2059;Dbxref=NCBI_GP:EFB91676.1;Name=EFB91676.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2059;product=hypothetical protein;protein_id=EFB91676.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 35517 35804 . + . ID=gene-HMPREF7215_2060;Name=HMPREF7215_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2060 GCA_000177335.1|ADFP01000024.1 Genbank CDS 35517 35804 . + 0 ID=cds-EFB91677.1;Parent=gene-HMPREF7215_2060;Dbxref=NCBI_GP:EFB91677.1;Name=EFB91677.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF7215_2060;product=DNA-binding helix-turn-helix protein;protein_id=EFB91677.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 35891 36685 . - . ID=gene-HMPREF7215_2061;Name=HMPREF7215_2061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2061 GCA_000177335.1|ADFP01000024.1 Genbank CDS 35891 36685 . - 0 ID=cds-EFB91678.1;Parent=gene-HMPREF7215_2061;Dbxref=NCBI_GP:EFB91678.1;Name=EFB91678.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_2061;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91678.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 36685 37593 . - . ID=gene-HMPREF7215_2062;Name=HMPREF7215_2062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2062 GCA_000177335.1|ADFP01000024.1 Genbank CDS 36685 37593 . - 0 ID=cds-EFB91679.1;Parent=gene-HMPREF7215_2062;Dbxref=NCBI_GP:EFB91679.1;Name=EFB91679.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_2062;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91679.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 37616 38683 . - . ID=gene-HMPREF7215_2063;Name=HMPREF7215_2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2063 GCA_000177335.1|ADFP01000024.1 Genbank CDS 37616 38683 . - 0 ID=cds-EFB91680.1;Parent=gene-HMPREF7215_2063;Dbxref=NCBI_GP:EFB91680.1;Name=EFB91680.1;Note=identified by match to protein family HMM PF04392;gbkey=CDS;locus_tag=HMPREF7215_2063;product=ABC transporter substrate binding protein;protein_id=EFB91680.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 39089 39517 . + . ID=gene-HMPREF7215_2064;Name=HMPREF7215_2064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2064 GCA_000177335.1|ADFP01000024.1 Genbank CDS 39089 39517 . + 0 ID=cds-EFB91681.1;Parent=gene-HMPREF7215_2064;Dbxref=NCBI_GP:EFB91681.1;Name=EFB91681.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF7215_2064;product=transcriptional regulator%2C Rrf2 family;protein_id=EFB91681.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 39661 40416 . + . ID=gene-HMPREF7215_2065;Name=HMPREF7215_2065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2065 GCA_000177335.1|ADFP01000024.1 Genbank CDS 39661 40416 . + 0 ID=cds-EFB91682.1;Parent=gene-HMPREF7215_2065;Dbxref=NCBI_GP:EFB91682.1;Name=EFB91682.1;gbkey=CDS;locus_tag=HMPREF7215_2065;product=hypothetical protein;protein_id=EFB91682.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 40413 41279 . + . ID=gene-HMPREF7215_2066;Name=HMPREF7215_2066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2066 GCA_000177335.1|ADFP01000024.1 Genbank CDS 40413 41279 . + 0 ID=cds-EFB91683.1;Parent=gene-HMPREF7215_2066;Dbxref=NCBI_GP:EFB91683.1;Name=EFB91683.1;gbkey=CDS;locus_tag=HMPREF7215_2066;product=hypothetical protein;protein_id=EFB91683.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 41301 42110 . + . ID=gene-HMPREF7215_2067;Name=HMPREF7215_2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2067 GCA_000177335.1|ADFP01000024.1 Genbank CDS 41301 42110 . + 0 ID=cds-EFB91684.1;Parent=gene-HMPREF7215_2067;Dbxref=NCBI_GP:EFB91684.1;Name=EFB91684.1;Note=identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00268;gbkey=CDS;locus_tag=HMPREF7215_2067;product=TIGR00268 family protein;protein_id=EFB91684.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 42236 42817 . - . ID=gene-HMPREF7215_2068;Name=HMPREF7215_2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2068 GCA_000177335.1|ADFP01000024.1 Genbank CDS 42236 42817 . - 0 ID=cds-EFB91685.1;Parent=gene-HMPREF7215_2068;Dbxref=NCBI_GP:EFB91685.1;Name=EFB91685.1;gbkey=CDS;locus_tag=HMPREF7215_2068;product=hypothetical protein;protein_id=EFB91685.1;transl_table=11 GCA_000177335.1|ADFP01000024.1 Genbank gene 42800 42922 . + . ID=gene-HMPREF7215_2069;Name=HMPREF7215_2069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2069 GCA_000177335.1|ADFP01000024.1 Genbank CDS 42800 42922 . + 0 ID=cds-EFB91686.1;Parent=gene-HMPREF7215_2069;Dbxref=NCBI_GP:EFB91686.1;Name=EFB91686.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2069;product=hypothetical protein;protein_id=EFB91686.1;transl_table=11 ##sequence-region ADFP01000023.1 1 43011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000023.1 Genbank region 1 43011 . + . ID=ADFP01000023.1:1..43011;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000023.1 Genbank gene 150 259 . + . ID=gene-HMPREF7215_1678;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF7215_1678 GCA_000177335.1|ADFP01000023.1 Genbank rRNA 150 259 . + . ID=rna-HMPREF7215_1678;Parent=gene-HMPREF7215_1678;gbkey=rRNA;gene=rrf;locus_tag=HMPREF7215_1678;product=5S ribosomal RNA GCA_000177335.1|ADFP01000023.1 Genbank exon 150 259 . + . ID=exon-HMPREF7215_1678-1;Parent=rna-HMPREF7215_1678;gbkey=rRNA;gene=rrf;locus_tag=HMPREF7215_1678;product=5S ribosomal RNA GCA_000177335.1|ADFP01000023.1 Genbank gene 541 1533 . + . ID=gene-HMPREF7215_1679;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=HMPREF7215_1679 GCA_000177335.1|ADFP01000023.1 Genbank CDS 541 1533 . + 0 ID=cds-EFB91687.1;Parent=gene-HMPREF7215_1679;Dbxref=NCBI_GP:EFB91687.1;Name=EFB91687.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658;gbkey=CDS;gene=argF;locus_tag=HMPREF7215_1679;product=ornithine carbamoyltransferase;protein_id=EFB91687.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 1618 2997 . + . ID=gene-HMPREF7215_1680;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF7215_1680 GCA_000177335.1|ADFP01000023.1 Genbank CDS 1618 2997 . + 0 ID=cds-EFB91688.1;Parent=gene-HMPREF7215_1680;Dbxref=NCBI_GP:EFB91688.1;Name=EFB91688.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF7215_1680;product=amino acid carrier protein;protein_id=EFB91688.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 3095 4252 . + . ID=gene-HMPREF7215_1681;Name=HMPREF7215_1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1681 GCA_000177335.1|ADFP01000023.1 Genbank CDS 3095 4252 . + 0 ID=cds-EFB91689.1;Parent=gene-HMPREF7215_1681;Dbxref=NCBI_GP:EFB91689.1;Name=EFB91689.1;gbkey=CDS;locus_tag=HMPREF7215_1681;product=transporter gate domain protein;protein_id=EFB91689.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 4262 6751 . + . ID=gene-HMPREF7215_1682;Name=HMPREF7215_1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1682 GCA_000177335.1|ADFP01000023.1 Genbank CDS 4262 6751 . + 0 ID=cds-EFB91690.1;Parent=gene-HMPREF7215_1682;Dbxref=NCBI_GP:EFB91690.1;Name=EFB91690.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724;gbkey=CDS;locus_tag=HMPREF7215_1682;product=ATPase family associated with various cellular activities (AAA);protein_id=EFB91690.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 6787 7716 . + . ID=gene-HMPREF7215_1683;Name=HMPREF7215_1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1683 GCA_000177335.1|ADFP01000023.1 Genbank CDS 6787 7716 . + 0 ID=cds-EFB91691.1;Parent=gene-HMPREF7215_1683;Dbxref=NCBI_GP:EFB91691.1;Name=EFB91691.1;Note=identified by match to protein family HMM PF00696;gbkey=CDS;locus_tag=HMPREF7215_1683;product=carbamate kinase;protein_id=EFB91691.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 7767 9098 . + . ID=gene-HMPREF7215_1684;Name=HMPREF7215_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1684 GCA_000177335.1|ADFP01000023.1 Genbank CDS 7767 9098 . + 0 ID=cds-EFB91692.1;Parent=gene-HMPREF7215_1684;Dbxref=NCBI_GP:EFB91692.1;Name=EFB91692.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF7215_1684;product=transcriptional regulator%2C AraC family;protein_id=EFB91692.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 9095 10261 . + . ID=gene-HMPREF7215_1685;Name=HMPREF7215_1685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1685 GCA_000177335.1|ADFP01000023.1 Genbank CDS 9095 10261 . + 0 ID=cds-EFB91693.1;Parent=gene-HMPREF7215_1685;Dbxref=NCBI_GP:EFB91693.1;Name=EFB91693.1;gbkey=CDS;locus_tag=HMPREF7215_1685;product=hypothetical protein;protein_id=EFB91693.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 10258 11361 . + . ID=gene-HMPREF7215_1686;Name=HMPREF7215_1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1686 GCA_000177335.1|ADFP01000023.1 Genbank CDS 10258 11361 . + 0 ID=cds-EFB91694.1;Parent=gene-HMPREF7215_1686;Dbxref=NCBI_GP:EFB91694.1;Name=EFB91694.1;gbkey=CDS;locus_tag=HMPREF7215_1686;product=hypothetical protein;protein_id=EFB91694.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 11358 11513 . + . ID=gene-HMPREF7215_1688;Name=HMPREF7215_1688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1688 GCA_000177335.1|ADFP01000023.1 Genbank CDS 11358 11513 . + 0 ID=cds-EFB91695.1;Parent=gene-HMPREF7215_1688;Dbxref=NCBI_GP:EFB91695.1;Name=EFB91695.1;gbkey=CDS;locus_tag=HMPREF7215_1688;product=hypothetical protein;protein_id=EFB91695.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 11476 12138 . - . ID=gene-HMPREF7215_1687;Name=HMPREF7215_1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1687 GCA_000177335.1|ADFP01000023.1 Genbank CDS 11476 12138 . - 0 ID=cds-EFB91696.1;Parent=gene-HMPREF7215_1687;Dbxref=NCBI_GP:EFB91696.1;Name=EFB91696.1;gbkey=CDS;locus_tag=HMPREF7215_1687;product=hypothetical protein;protein_id=EFB91696.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank binding_site 12269 12450 . + . ID=id-ADFP01000023.1:12269..12450;Note=cobalamin riboswitch%3B Rfam score 70.76;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00174 GCA_000177335.1|ADFP01000023.1 Genbank gene 12600 13607 . + . ID=gene-HMPREF7215_1690;Name=HMPREF7215_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1690 GCA_000177335.1|ADFP01000023.1 Genbank CDS 12600 13607 . + 0 ID=cds-EFB91697.1;Parent=gene-HMPREF7215_1690;Dbxref=NCBI_GP:EFB91697.1;Name=EFB91697.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_1690;product=periplasmic binding protein;protein_id=EFB91697.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 13631 13807 . + . ID=gene-HMPREF7215_1691;Name=HMPREF7215_1691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1691 GCA_000177335.1|ADFP01000023.1 Genbank CDS 13631 13807 . + 0 ID=cds-EFB91698.1;Parent=gene-HMPREF7215_1691;Dbxref=NCBI_GP:EFB91698.1;Name=EFB91698.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1691;product=hypothetical protein;protein_id=EFB91698.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 13972 14976 . + . ID=gene-HMPREF7215_1692;Name=HMPREF7215_1692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1692 GCA_000177335.1|ADFP01000023.1 Genbank CDS 13972 14976 . + 0 ID=cds-EFB91699.1;Parent=gene-HMPREF7215_1692;Dbxref=NCBI_GP:EFB91699.1;Name=EFB91699.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_1692;product=periplasmic binding protein;protein_id=EFB91699.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 14977 16038 . + . ID=gene-HMPREF7215_1693;Name=HMPREF7215_1693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1693 GCA_000177335.1|ADFP01000023.1 Genbank CDS 14977 16038 . + 0 ID=cds-EFB91700.1;Parent=gene-HMPREF7215_1693;Dbxref=NCBI_GP:EFB91700.1;Name=EFB91700.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF7215_1693;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFB91700.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 16035 16820 . + . ID=gene-HMPREF7215_1694;Name=HMPREF7215_1694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1694 GCA_000177335.1|ADFP01000023.1 Genbank CDS 16035 16820 . + 0 ID=cds-EFB91701.1;Parent=gene-HMPREF7215_1694;Dbxref=NCBI_GP:EFB91701.1;Name=EFB91701.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1694;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91701.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 17089 18540 . + . ID=gene-HMPREF7215_1695;Name=HMPREF7215_1695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1695 GCA_000177335.1|ADFP01000023.1 Genbank CDS 17089 18540 . + 0 ID=cds-EFB91702.1;Parent=gene-HMPREF7215_1695;Dbxref=NCBI_GP:EFB91702.1;Name=EFB91702.1;Note=identified by match to protein family HMM PF01425;gbkey=CDS;locus_tag=HMPREF7215_1695;product=Amidase;protein_id=EFB91702.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 18625 19320 . + . ID=gene-HMPREF7215_1696;Name=HMPREF7215_1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1696 GCA_000177335.1|ADFP01000023.1 Genbank CDS 18625 19320 . + 0 ID=cds-EFB91703.1;Parent=gene-HMPREF7215_1696;Dbxref=NCBI_GP:EFB91703.1;Name=EFB91703.1;gbkey=CDS;locus_tag=HMPREF7215_1696;product=hypothetical protein;protein_id=EFB91703.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 19334 19990 . + . ID=gene-HMPREF7215_1697;Name=HMPREF7215_1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1697 GCA_000177335.1|ADFP01000023.1 Genbank CDS 19334 19990 . + 0 ID=cds-EFB91704.1;Parent=gene-HMPREF7215_1697;Dbxref=NCBI_GP:EFB91704.1;Name=EFB91704.1;gbkey=CDS;locus_tag=HMPREF7215_1697;product=hypothetical protein;protein_id=EFB91704.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 20084 20599 . + . ID=gene-HMPREF7215_1698;Name=HMPREF7215_1698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1698 GCA_000177335.1|ADFP01000023.1 Genbank CDS 20084 20599 . + 0 ID=cds-EFB91705.1;Parent=gene-HMPREF7215_1698;Dbxref=NCBI_GP:EFB91705.1;Name=EFB91705.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;locus_tag=HMPREF7215_1698;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=EFB91705.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 20688 20858 . + . ID=gene-HMPREF7215_1699;Name=HMPREF7215_1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1699 GCA_000177335.1|ADFP01000023.1 Genbank CDS 20688 20858 . + 0 ID=cds-EFB91706.1;Parent=gene-HMPREF7215_1699;Dbxref=NCBI_GP:EFB91706.1;Name=EFB91706.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1699;product=hypothetical protein;protein_id=EFB91706.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 20937 21590 . + . ID=gene-HMPREF7215_1700;Name=HMPREF7215_1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1700 GCA_000177335.1|ADFP01000023.1 Genbank CDS 20937 21590 . + 0 ID=cds-EFB91707.1;Parent=gene-HMPREF7215_1700;Dbxref=NCBI_GP:EFB91707.1;Name=EFB91707.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_1700;product=putative membrane protein;protein_id=EFB91707.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 21755 22723 . - . ID=gene-HMPREF7215_1701;Name=HMPREF7215_1701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1701 GCA_000177335.1|ADFP01000023.1 Genbank CDS 21755 22723 . - 0 ID=cds-EFB91708.1;Parent=gene-HMPREF7215_1701;Dbxref=NCBI_GP:EFB91708.1;Name=EFB91708.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1701;product=LysR substrate binding domain protein;protein_id=EFB91708.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 22755 23606 . + . ID=gene-HMPREF7215_1702;Name=HMPREF7215_1702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1702 GCA_000177335.1|ADFP01000023.1 Genbank CDS 22755 23606 . + 0 ID=cds-EFB91709.1;Parent=gene-HMPREF7215_1702;Dbxref=NCBI_GP:EFB91709.1;Name=EFB91709.1;Note=identified by match to protein family HMM PF03737;gbkey=CDS;locus_tag=HMPREF7215_1702;product=RraA family;protein_id=EFB91709.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 23637 24668 . + . ID=gene-HMPREF7215_1703;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1703 GCA_000177335.1|ADFP01000023.1 Genbank CDS 23637 24668 . + 0 ID=cds-EFB91710.1;Parent=gene-HMPREF7215_1703;Dbxref=NCBI_GP:EFB91710.1;Name=EFB91710.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF7215_1703;product=4-phosphoerythronate dehydrogenase;protein_id=EFB91710.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 24682 25644 . + . ID=gene-HMPREF7215_1704;Name=HMPREF7215_1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1704 GCA_000177335.1|ADFP01000023.1 Genbank CDS 24682 25644 . + 0 ID=cds-EFB91711.1;Parent=gene-HMPREF7215_1704;Dbxref=NCBI_GP:EFB91711.1;Name=EFB91711.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_1704;product=hypothetical protein;protein_id=EFB91711.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 25724 26203 . + . ID=gene-HMPREF7215_1705;Name=HMPREF7215_1705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1705 GCA_000177335.1|ADFP01000023.1 Genbank CDS 25724 26203 . + 0 ID=cds-EFB91712.1;Parent=gene-HMPREF7215_1705;Dbxref=NCBI_GP:EFB91712.1;Name=EFB91712.1;gbkey=CDS;locus_tag=HMPREF7215_1705;product=hypothetical protein;protein_id=EFB91712.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 26215 27726 . + . ID=gene-HMPREF7215_1706;Name=HMPREF7215_1706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1706 GCA_000177335.1|ADFP01000023.1 Genbank CDS 26215 27726 . + 0 ID=cds-EFB91713.1;Parent=gene-HMPREF7215_1706;Dbxref=NCBI_GP:EFB91713.1;Name=EFB91713.1;Note=identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_1706;product=membrane protein;protein_id=EFB91713.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 27825 28658 . - . ID=gene-HMPREF7215_1707;Name=HMPREF7215_1707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1707 GCA_000177335.1|ADFP01000023.1 Genbank CDS 27825 28658 . - 0 ID=cds-EFB91714.1;Parent=gene-HMPREF7215_1707;Dbxref=NCBI_GP:EFB91714.1;Name=EFB91714.1;Note=identified by match to protein family HMM PF04951;gbkey=CDS;locus_tag=HMPREF7215_1707;product=D-stereospecific aminopeptidase;protein_id=EFB91714.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 28688 28822 . + . ID=gene-HMPREF7215_1709;Name=HMPREF7215_1709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1709 GCA_000177335.1|ADFP01000023.1 Genbank CDS 28688 28822 . + 0 ID=cds-EFB91715.1;Parent=gene-HMPREF7215_1709;Dbxref=NCBI_GP:EFB91715.1;Name=EFB91715.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1709;product=hypothetical protein;protein_id=EFB91715.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 28801 30372 . - . ID=gene-HMPREF7215_1708;Name=HMPREF7215_1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1708 GCA_000177335.1|ADFP01000023.1 Genbank CDS 28801 30372 . - 0 ID=cds-EFB91716.1;Parent=gene-HMPREF7215_1708;Dbxref=NCBI_GP:EFB91716.1;Name=EFB91716.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1708;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB91716.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 30466 31434 . - . ID=gene-HMPREF7215_1710;Name=HMPREF7215_1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1710 GCA_000177335.1|ADFP01000023.1 Genbank CDS 30466 31434 . - 0 ID=cds-EFB91717.1;Parent=gene-HMPREF7215_1710;Dbxref=NCBI_GP:EFB91717.1;Name=EFB91717.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1710;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91717.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 31421 32398 . - . ID=gene-HMPREF7215_1711;Name=HMPREF7215_1711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1711 GCA_000177335.1|ADFP01000023.1 Genbank CDS 31421 32398 . - 0 ID=cds-EFB91718.1;Parent=gene-HMPREF7215_1711;Dbxref=NCBI_GP:EFB91718.1;Name=EFB91718.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1711;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91718.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 32405 33265 . - . ID=gene-HMPREF7215_1712;Name=HMPREF7215_1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1712 GCA_000177335.1|ADFP01000023.1 Genbank CDS 32405 33265 . - 0 ID=cds-EFB91719.1;Parent=gene-HMPREF7215_1712;Dbxref=NCBI_GP:EFB91719.1;Name=EFB91719.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1712;product=ABC transporter%2C permease protein;protein_id=EFB91719.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 33258 34175 . - . ID=gene-HMPREF7215_1713;Name=HMPREF7215_1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1713 GCA_000177335.1|ADFP01000023.1 Genbank CDS 33258 34175 . - 0 ID=cds-EFB91720.1;Parent=gene-HMPREF7215_1713;Dbxref=NCBI_GP:EFB91720.1;Name=EFB91720.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1713;product=ABC transporter%2C permease protein;protein_id=EFB91720.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 34414 35364 . - . ID=gene-HMPREF7215_1714;Name=HMPREF7215_1714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1714 GCA_000177335.1|ADFP01000023.1 Genbank CDS 34414 35364 . - 0 ID=cds-EFB91721.1;Parent=gene-HMPREF7215_1714;Dbxref=NCBI_GP:EFB91721.1;Name=EFB91721.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1714;product=LysR substrate binding domain protein;protein_id=EFB91721.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 35514 36551 . + . ID=gene-HMPREF7215_1715;Name=HMPREF7215_1715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1715 GCA_000177335.1|ADFP01000023.1 Genbank CDS 35514 36551 . + 0 ID=cds-EFB91722.1;Parent=gene-HMPREF7215_1715;Dbxref=NCBI_GP:EFB91722.1;Name=EFB91722.1;Note=identified by match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF7215_1715;product=Beta-eliminating lyase;protein_id=EFB91722.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 36576 37811 . + . ID=gene-HMPREF7215_1717;Name=HMPREF7215_1717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1717 GCA_000177335.1|ADFP01000023.1 Genbank CDS 36576 37811 . + 0 ID=cds-EFB91723.1;Parent=gene-HMPREF7215_1717;Dbxref=NCBI_GP:EFB91723.1;Name=EFB91723.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=HMPREF7215_1717;product=transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein;protein_id=EFB91723.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 37808 37942 . - . ID=gene-HMPREF7215_1716;Name=HMPREF7215_1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1716 GCA_000177335.1|ADFP01000023.1 Genbank CDS 37808 37942 . - 0 ID=cds-EFB91724.1;Parent=gene-HMPREF7215_1716;Dbxref=NCBI_GP:EFB91724.1;Name=EFB91724.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1716;product=hypothetical protein;protein_id=EFB91724.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 38200 38370 . + . ID=gene-HMPREF7215_1718;Name=HMPREF7215_1718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1718 GCA_000177335.1|ADFP01000023.1 Genbank CDS 38200 38370 . + 0 ID=cds-EFB91725.1;Parent=gene-HMPREF7215_1718;Dbxref=NCBI_GP:EFB91725.1;Name=EFB91725.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;locus_tag=HMPREF7215_1718;product=YcfA-like protein;protein_id=EFB91725.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 38408 38821 . + . ID=gene-HMPREF7215_1719;Name=HMPREF7215_1719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1719 GCA_000177335.1|ADFP01000023.1 Genbank CDS 38408 38821 . + 0 ID=cds-EFB91726.1;Parent=gene-HMPREF7215_1719;Dbxref=NCBI_GP:EFB91726.1;Name=EFB91726.1;Note=identified by match to protein family HMM PF03681;gbkey=CDS;locus_tag=HMPREF7215_1719;product=toxin-antitoxin system%2C antitoxin component%2C HicB family;protein_id=EFB91726.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 39093 39180 . - . ID=gene-HMPREF7215_1720;Name=HMPREF7215_1720;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1720 GCA_000177335.1|ADFP01000023.1 Genbank tRNA 39093 39180 . - . ID=rna-HMPREF7215_1720;Parent=gene-HMPREF7215_1720;gbkey=tRNA;locus_tag=HMPREF7215_1720;product=tRNA-Ser GCA_000177335.1|ADFP01000023.1 Genbank exon 39093 39180 . - . ID=exon-HMPREF7215_1720-1;Parent=rna-HMPREF7215_1720;gbkey=tRNA;locus_tag=HMPREF7215_1720;product=tRNA-Ser GCA_000177335.1|ADFP01000023.1 Genbank gene 39247 39825 . - . ID=gene-HMPREF7215_1721;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1721 GCA_000177335.1|ADFP01000023.1 Genbank CDS 39247 39825 . - 0 ID=cds-EFB91727.1;Parent=gene-HMPREF7215_1721;Dbxref=NCBI_GP:EFB91727.1;Name=EFB91727.1;Note=identified by match to protein family HMM PF01810;gbkey=CDS;gene=eamB;locus_tag=HMPREF7215_1721;product=cysteine/O-acetylserine efflux protein;protein_id=EFB91727.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 39921 41168 . - . ID=gene-HMPREF7215_1722;Name=HMPREF7215_1722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1722 GCA_000177335.1|ADFP01000023.1 Genbank CDS 39921 41168 . - 0 ID=cds-EFB91728.1;Parent=gene-HMPREF7215_1722;Dbxref=NCBI_GP:EFB91728.1;Name=EFB91728.1;Note=identified by match to protein family HMM PF03349;gbkey=CDS;locus_tag=HMPREF7215_1722;product=outer membrane insertion signal domain protein;protein_id=EFB91728.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 41516 41647 . + . ID=gene-HMPREF7215_1723;Name=HMPREF7215_1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1723 GCA_000177335.1|ADFP01000023.1 Genbank CDS 41516 41647 . + 0 ID=cds-EFB91729.1;Parent=gene-HMPREF7215_1723;Dbxref=NCBI_GP:EFB91729.1;Name=EFB91729.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1723;product=hypothetical protein;protein_id=EFB91729.1;transl_table=11 GCA_000177335.1|ADFP01000023.1 Genbank gene 41828 43011 . - . ID=gene-HMPREF7215_1724;Name=HMPREF7215_1724;end_range=43011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1724;partial=true GCA_000177335.1|ADFP01000023.1 Genbank CDS 41828 43011 . - 2 ID=cds-EFB91730.1;Parent=gene-HMPREF7215_1724;Dbxref=NCBI_GP:EFB91730.1;Name=EFB91730.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00023;end_range=43011,.;gbkey=CDS;locus_tag=HMPREF7215_1724;partial=true;product=ankyrin repeat protein;protein_id=EFB91730.1;transl_table=11 ##sequence-region ADFP01000022.1 1 1081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000022.1 Genbank region 1 1081 . + . ID=ADFP01000022.1:1..1081;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000022.1 Genbank gene 1 1081 . + . ID=gene-HMPREF7215_1664;Name=HMPREF7215_1664;end_range=1081,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1664;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000022.1 Genbank CDS 1 1081 . + 1 ID=cds-EFB91731.1;Parent=gene-HMPREF7215_1664;Dbxref=NCBI_GP:EFB91731.1;Name=EFB91731.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=1081,.;gbkey=CDS;locus_tag=HMPREF7215_1664;partial=true;product=hypothetical protein;protein_id=EFB91731.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000021.1 1 15358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000021.1 Genbank region 1 15358 . + . ID=ADFP01000021.1:1..15358;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000021.1 Genbank gene 148 963 . + . ID=gene-HMPREF7215_0245;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0245 GCA_000177335.1|ADFP01000021.1 Genbank CDS 148 963 . + 0 ID=cds-EFB91732.1;Parent=gene-HMPREF7215_0245;Dbxref=NCBI_GP:EFB91732.1;Name=EFB91732.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011;gbkey=CDS;gene=rpsB;locus_tag=HMPREF7215_0245;product=ribosomal protein S2;protein_id=EFB91732.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 984 1577 . + . ID=gene-HMPREF7215_0246;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HMPREF7215_0246 GCA_000177335.1|ADFP01000021.1 Genbank CDS 984 1577 . + 0 ID=cds-EFB91733.1;Parent=gene-HMPREF7215_0246;Dbxref=NCBI_GP:EFB91733.1;Name=EFB91733.1;Note=identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116;gbkey=CDS;gene=tsf;locus_tag=HMPREF7215_0246;product=translation elongation factor Ts;protein_id=EFB91733.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 1736 2449 . + . ID=gene-HMPREF7215_0247;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0247 GCA_000177335.1|ADFP01000021.1 Genbank CDS 1736 2449 . + 0 ID=cds-EFB91734.1;Parent=gene-HMPREF7215_0247;Dbxref=NCBI_GP:EFB91734.1;Name=EFB91734.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075;gbkey=CDS;gene=pyrH;locus_tag=HMPREF7215_0247;product=UMP kinase;protein_id=EFB91734.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 2470 3018 . + . ID=gene-HMPREF7215_0248;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=HMPREF7215_0248 GCA_000177335.1|ADFP01000021.1 Genbank CDS 2470 3018 . + 0 ID=cds-EFB91735.1;Parent=gene-HMPREF7215_0248;Dbxref=NCBI_GP:EFB91735.1;Name=EFB91735.1;Note=identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496;gbkey=CDS;gene=frr;locus_tag=HMPREF7215_0248;product=ribosome recycling factor;protein_id=EFB91735.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 3091 4791 . - . ID=gene-HMPREF7215_0249;Name=ade;gbkey=Gene;gene=ade;gene_biotype=protein_coding;locus_tag=HMPREF7215_0249 GCA_000177335.1|ADFP01000021.1 Genbank CDS 3091 4791 . - 0 ID=cds-EFB91736.1;Parent=gene-HMPREF7215_0249;Dbxref=NCBI_GP:EFB91736.1;Name=EFB91736.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR01178;gbkey=CDS;gene=ade;locus_tag=HMPREF7215_0249;product=adenine deaminase;protein_id=EFB91736.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 4878 6200 . - . ID=gene-HMPREF7215_0250;Name=HMPREF7215_0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0250 GCA_000177335.1|ADFP01000021.1 Genbank CDS 4878 6200 . - 0 ID=cds-EFB91737.1;Parent=gene-HMPREF7215_0250;Dbxref=NCBI_GP:EFB91737.1;Name=EFB91737.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916;gbkey=CDS;locus_tag=HMPREF7215_0250;product=putative permease;protein_id=EFB91737.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 6407 7606 . - . ID=gene-HMPREF7215_0251;Name=HMPREF7215_0251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0251 GCA_000177335.1|ADFP01000021.1 Genbank CDS 6407 7606 . - 0 ID=cds-EFB91738.1;Parent=gene-HMPREF7215_0251;Dbxref=NCBI_GP:EFB91738.1;Name=EFB91738.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_0251;product=aspartate aminotransferase;protein_id=EFB91738.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 7801 8331 . + . ID=gene-HMPREF7215_0252;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0252 GCA_000177335.1|ADFP01000021.1 Genbank CDS 7801 8331 . + 0 ID=cds-EFB91739.1;Parent=gene-HMPREF7215_0252;Dbxref=NCBI_GP:EFB91739.1;Name=EFB91739.1;Note=identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=raiA;locus_tag=HMPREF7215_0252;product=ribosomal subunit interface protein;protein_id=EFB91739.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 8517 8831 . + . ID=gene-HMPREF7215_0253;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HMPREF7215_0253 GCA_000177335.1|ADFP01000021.1 Genbank CDS 8517 8831 . + 0 ID=cds-EFB91740.1;Parent=gene-HMPREF7215_0253;Dbxref=NCBI_GP:EFB91740.1;Name=EFB91740.1;Note=identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;locus_tag=HMPREF7215_0253;product=ribosomal protein L21;protein_id=EFB91740.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 8873 9151 . + . ID=gene-HMPREF7215_0254;Name=HMPREF7215_0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0254 GCA_000177335.1|ADFP01000021.1 Genbank CDS 8873 9151 . + 0 ID=cds-EFB91741.1;Parent=gene-HMPREF7215_0254;Dbxref=NCBI_GP:EFB91741.1;Name=EFB91741.1;Note=identified by match to protein family HMM PF04327;gbkey=CDS;locus_tag=HMPREF7215_0254;product=hypothetical protein;protein_id=EFB91741.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 9151 9426 . + . ID=gene-HMPREF7215_0255;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0255 GCA_000177335.1|ADFP01000021.1 Genbank CDS 9151 9426 . + 0 ID=cds-EFB91742.1;Parent=gene-HMPREF7215_0255;Dbxref=NCBI_GP:EFB91742.1;Name=EFB91742.1;Note=identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062;gbkey=CDS;gene=rpmA;locus_tag=HMPREF7215_0255;product=ribosomal protein L27;protein_id=EFB91742.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 9530 10831 . + . ID=gene-HMPREF7215_0256;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0256 GCA_000177335.1|ADFP01000021.1 Genbank CDS 9530 10831 . + 0 ID=cds-EFB91743.1;Parent=gene-HMPREF7215_0256;Dbxref=NCBI_GP:EFB91743.1;Name=EFB91743.1;Note=identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595;gbkey=CDS;gene=cgtA;locus_tag=HMPREF7215_0256;product=Obg family GTPase CgtA;protein_id=EFB91743.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 10855 11493 . + . ID=gene-HMPREF7215_0257;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0257 GCA_000177335.1|ADFP01000021.1 Genbank CDS 10855 11493 . + 0 ID=cds-EFB91744.1;Parent=gene-HMPREF7215_0257;Dbxref=NCBI_GP:EFB91744.1;Name=EFB91744.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482;gbkey=CDS;gene=nadD;locus_tag=HMPREF7215_0257;product=nicotinate-nucleotide adenylyltransferase;protein_id=EFB91744.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 11490 12803 . + . ID=gene-HMPREF7215_0258;Name=HMPREF7215_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0258 GCA_000177335.1|ADFP01000021.1 Genbank CDS 11490 12803 . + 0 ID=cds-EFB91745.1;Parent=gene-HMPREF7215_0258;Dbxref=NCBI_GP:EFB91745.1;Name=EFB91745.1;Note=identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350;gbkey=CDS;locus_tag=HMPREF7215_0258;product=cell envelope-like function transcriptional attenuator common domain protein;protein_id=EFB91745.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 12821 13174 . + . ID=gene-HMPREF7215_0259;Name=HMPREF7215_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0259 GCA_000177335.1|ADFP01000021.1 Genbank CDS 12821 13174 . + 0 ID=cds-EFB91746.1;Parent=gene-HMPREF7215_0259;Dbxref=NCBI_GP:EFB91746.1;Name=EFB91746.1;Note=identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;locus_tag=HMPREF7215_0259;product=iojap-like protein;protein_id=EFB91746.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 13275 14270 . + . ID=gene-HMPREF7215_0260;Name=HMPREF7215_0260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0260 GCA_000177335.1|ADFP01000021.1 Genbank CDS 13275 14270 . + 0 ID=cds-EFB91747.1;Parent=gene-HMPREF7215_0260;Dbxref=NCBI_GP:EFB91747.1;Name=EFB91747.1;Note=identified by match to protein family HMM PF08245;gbkey=CDS;locus_tag=HMPREF7215_0260;product=putative poly-gamma-glutamate synthase PgsB;protein_id=EFB91747.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 14267 14704 . + . ID=gene-HMPREF7215_0261;Name=HMPREF7215_0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0261 GCA_000177335.1|ADFP01000021.1 Genbank CDS 14267 14704 . + 0 ID=cds-EFB91748.1;Parent=gene-HMPREF7215_0261;Dbxref=NCBI_GP:EFB91748.1;Name=EFB91748.1;gbkey=CDS;locus_tag=HMPREF7215_0261;product=putative poly-gamma-glutamate biosynthesis protein PgsC;protein_id=EFB91748.1;transl_table=11 GCA_000177335.1|ADFP01000021.1 Genbank gene 14701 15358 . + . ID=gene-HMPREF7215_0262;Name=HMPREF7215_0262;end_range=15358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0262;partial=true GCA_000177335.1|ADFP01000021.1 Genbank CDS 14701 15358 . + 0 ID=cds-EFB91749.1;Parent=gene-HMPREF7215_0262;Dbxref=NCBI_GP:EFB91749.1;Name=EFB91749.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=15358,.;gbkey=CDS;locus_tag=HMPREF7215_0262;partial=true;product=hypothetical protein;protein_id=EFB91749.1;transl_table=11 ##sequence-region ADFP01000020.1 1 2464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000020.1 Genbank region 1 2464 . + . ID=ADFP01000020.1:1..2464;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000020.1 Genbank gene 1 1202 . - . ID=gene-HMPREF7215_0777;Name=HMPREF7215_0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0777;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000020.1 Genbank CDS 1 1202 . - 0 ID=cds-EFB91750.1;Parent=gene-HMPREF7215_0777;Dbxref=NCBI_GP:EFB91750.1;Name=EFB91750.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0777;partial=true;product=hypothetical protein;protein_id=EFB91750.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000020.1 Genbank gene 1192 2229 . - . ID=gene-HMPREF7215_0778;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0778 GCA_000177335.1|ADFP01000020.1 Genbank CDS 1192 2229 . - 0 ID=cds-EFB91751.1;Parent=gene-HMPREF7215_0778;Dbxref=NCBI_GP:EFB91751.1;Name=EFB91751.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00124%3B match to protein family HMM TIGR00125;gbkey=CDS;gene=citC;locus_tag=HMPREF7215_0778;product=[citrate (pro-3S)-lyase] ligase;protein_id=EFB91751.1;transl_table=11 GCA_000177335.1|ADFP01000020.1 Genbank gene 2278 2464 . - . ID=gene-HMPREF7215_0779;Name=HMPREF7215_0779;end_range=2464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0779;partial=true GCA_000177335.1|ADFP01000020.1 Genbank CDS 2278 2464 . - 1 ID=cds-EFB91752.1;Parent=gene-HMPREF7215_0779;Dbxref=NCBI_GP:EFB91752.1;Name=EFB91752.1;Note=identified by glimmer%3B putative;end_range=2464,.;gbkey=CDS;locus_tag=HMPREF7215_0779;partial=true;product=hypothetical protein;protein_id=EFB91752.1;transl_table=11 ##sequence-region ADFP01000019.1 1 20815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000019.1 Genbank region 1 20815 . + . ID=ADFP01000019.1:1..20815;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000019.1 Genbank gene 1 761 . - . ID=gene-HMPREF7215_0749;Name=HMPREF7215_0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0749;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000019.1 Genbank CDS 1 761 . - 0 ID=cds-EFB91753.1;Parent=gene-HMPREF7215_0749;Dbxref=NCBI_GP:EFB91753.1;Name=EFB91753.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00636;gbkey=CDS;locus_tag=HMPREF7215_0749;partial=true;product=ribonuclease III;protein_id=EFB91753.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 909 2717 . - . ID=gene-HMPREF7215_0750;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0750 GCA_000177335.1|ADFP01000019.1 Genbank CDS 909 2717 . - 0 ID=cds-EFB91754.1;Parent=gene-HMPREF7215_0750;Dbxref=NCBI_GP:EFB91754.1;Name=EFB91754.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459;gbkey=CDS;gene=aspS;locus_tag=HMPREF7215_0750;product=aspartate--tRNA ligase;protein_id=EFB91754.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 2791 4062 . - . ID=gene-HMPREF7215_0751;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0751 GCA_000177335.1|ADFP01000019.1 Genbank CDS 2791 4062 . - 0 ID=cds-EFB91755.1;Parent=gene-HMPREF7215_0751;Dbxref=NCBI_GP:EFB91755.1;Name=EFB91755.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442;gbkey=CDS;gene=hisS;locus_tag=HMPREF7215_0751;product=histidine--tRNA ligase;protein_id=EFB91755.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 4309 4644 . - . ID=gene-HMPREF7215_0752;Name=HMPREF7215_0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0752 GCA_000177335.1|ADFP01000019.1 Genbank CDS 4309 4644 . - 0 ID=cds-EFB91756.1;Parent=gene-HMPREF7215_0752;Dbxref=NCBI_GP:EFB91756.1;Name=EFB91756.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_0752;product=cupin domain protein;protein_id=EFB91756.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 4635 4781 . - . ID=gene-HMPREF7215_0753;Name=HMPREF7215_0753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0753 GCA_000177335.1|ADFP01000019.1 Genbank CDS 4635 4781 . - 0 ID=cds-EFB91757.1;Parent=gene-HMPREF7215_0753;Dbxref=NCBI_GP:EFB91757.1;Name=EFB91757.1;Note=2.4.2.22;gbkey=CDS;locus_tag=HMPREF7215_0753;product=hypothetical protein;protein_id=EFB91757.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 4830 4964 . - . ID=gene-HMPREF7215_0754;Name=HMPREF7215_0754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0754 GCA_000177335.1|ADFP01000019.1 Genbank CDS 4830 4964 . - 0 ID=cds-EFB91758.1;Parent=gene-HMPREF7215_0754;Dbxref=NCBI_GP:EFB91758.1;Name=EFB91758.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0754;product=hypothetical protein;protein_id=EFB91758.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 5235 5939 . + . ID=gene-HMPREF7215_0755;Name=HMPREF7215_0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0755 GCA_000177335.1|ADFP01000019.1 Genbank CDS 5235 5939 . + 0 ID=cds-EFB91759.1;Parent=gene-HMPREF7215_0755;Dbxref=NCBI_GP:EFB91759.1;Name=EFB91759.1;Note=identified by match to protein family HMM PF03483;gbkey=CDS;locus_tag=HMPREF7215_0755;product=B3/4 domain protein;protein_id=EFB91759.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 6187 6366 . - . ID=gene-HMPREF7215_0756;Name=HMPREF7215_0756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0756 GCA_000177335.1|ADFP01000019.1 Genbank CDS 6187 6366 . - 0 ID=cds-EFB91760.1;Parent=gene-HMPREF7215_0756;Dbxref=NCBI_GP:EFB91760.1;Name=EFB91760.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0756;product=hypothetical protein;protein_id=EFB91760.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 6517 7263 . - . ID=gene-HMPREF7215_0757;Name=HMPREF7215_0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0757 GCA_000177335.1|ADFP01000019.1 Genbank CDS 6517 7263 . - 0 ID=cds-EFB91761.1;Parent=gene-HMPREF7215_0757;Dbxref=NCBI_GP:EFB91761.1;Name=EFB91761.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;locus_tag=HMPREF7215_0757;product=response regulator receiver domain protein;protein_id=EFB91761.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 7260 8876 . - . ID=gene-HMPREF7215_0758;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0758 GCA_000177335.1|ADFP01000019.1 Genbank CDS 7260 8876 . - 0 ID=cds-EFB91762.1;Parent=gene-HMPREF7215_0758;Dbxref=NCBI_GP:EFB91762.1;Name=EFB91762.1;Note=identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448;gbkey=CDS;gene=dcuS;locus_tag=HMPREF7215_0758;product=sensor protein DcuS;protein_id=EFB91762.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 9204 9329 . - . ID=gene-HMPREF7215_0759;Name=HMPREF7215_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0759 GCA_000177335.1|ADFP01000019.1 Genbank CDS 9204 9329 . - 0 ID=cds-EFB91763.1;Parent=gene-HMPREF7215_0759;Dbxref=NCBI_GP:EFB91763.1;Name=EFB91763.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0759;product=hypothetical protein;protein_id=EFB91763.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 9360 10934 . - . ID=gene-HMPREF7215_0760;Name=ydaH;gbkey=Gene;gene=ydaH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0760 GCA_000177335.1|ADFP01000019.1 Genbank CDS 9360 10934 . - 0 ID=cds-EFB91764.1;Parent=gene-HMPREF7215_0760;Dbxref=NCBI_GP:EFB91764.1;Name=EFB91764.1;Note=identified by match to protein family HMM PF03806;gbkey=CDS;gene=ydaH;locus_tag=HMPREF7215_0760;product=AbgT transporter family;protein_id=EFB91764.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 10941 11072 . + . ID=gene-HMPREF7215_0761;Name=HMPREF7215_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0761 GCA_000177335.1|ADFP01000019.1 Genbank CDS 10941 11072 . + 0 ID=cds-EFB91765.1;Parent=gene-HMPREF7215_0761;Dbxref=NCBI_GP:EFB91765.1;Name=EFB91765.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0761;product=hypothetical protein;protein_id=EFB91765.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 11168 11818 . + . ID=gene-HMPREF7215_0762;Name=HMPREF7215_0762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0762 GCA_000177335.1|ADFP01000019.1 Genbank CDS 11168 11818 . + 0 ID=cds-EFB91766.1;Parent=gene-HMPREF7215_0762;Dbxref=NCBI_GP:EFB91766.1;Name=EFB91766.1;Note=identified by match to protein family HMM PF08378;gbkey=CDS;locus_tag=HMPREF7215_0762;product=hypothetical protein;protein_id=EFB91766.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 11815 12921 . + . ID=gene-HMPREF7215_0763;Name=HMPREF7215_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0763 GCA_000177335.1|ADFP01000019.1 Genbank CDS 11815 12921 . + 0 ID=cds-EFB91767.1;Parent=gene-HMPREF7215_0763;Dbxref=NCBI_GP:EFB91767.1;Name=EFB91767.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01883;gbkey=CDS;locus_tag=HMPREF7215_0763;product=peptidase T-like protein;protein_id=EFB91767.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 13024 13911 . - . ID=gene-HMPREF7215_0764;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0764 GCA_000177335.1|ADFP01000019.1 Genbank CDS 13024 13911 . - 0 ID=cds-EFB91768.1;Parent=gene-HMPREF7215_0764;Dbxref=NCBI_GP:EFB91768.1;Name=EFB91768.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207;gbkey=CDS;gene=rfbA;locus_tag=HMPREF7215_0764;product=glucose-1-phosphate thymidylyltransferase;protein_id=EFB91768.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 14069 14707 . + . ID=gene-HMPREF7215_0765;Name=HMPREF7215_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0765 GCA_000177335.1|ADFP01000019.1 Genbank CDS 14069 14707 . + 0 ID=cds-EFB91769.1;Parent=gene-HMPREF7215_0765;Dbxref=NCBI_GP:EFB91769.1;Name=EFB91769.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=HMPREF7215_0765;product=flavin reductase;protein_id=EFB91769.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 14776 18870 . - . ID=gene-HMPREF7215_0766;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HMPREF7215_0766 GCA_000177335.1|ADFP01000019.1 Genbank CDS 14776 18870 . - 0 ID=cds-EFB91770.1;Parent=gene-HMPREF7215_0766;Dbxref=NCBI_GP:EFB91770.1;Name=EFB91770.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF01678%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR00652%3B match to protein family HMM TIGR01369;gbkey=CDS;gene=dapF;locus_tag=HMPREF7215_0766;product=diaminopimelate epimerase;protein_id=EFB91770.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 18857 19951 . - . ID=gene-HMPREF7215_0767;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0767 GCA_000177335.1|ADFP01000019.1 Genbank CDS 18857 19951 . - 0 ID=cds-EFB91771.1;Parent=gene-HMPREF7215_0767;Dbxref=NCBI_GP:EFB91771.1;Name=EFB91771.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=CDS;gene=carA;locus_tag=HMPREF7215_0767;product=carbamoyl-phosphate synthase%2C small subunit;protein_id=EFB91771.1;transl_table=11 GCA_000177335.1|ADFP01000019.1 Genbank gene 20010 20815 . - . ID=gene-HMPREF7215_0768;Name=HMPREF7215_0768;end_range=20815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0768;partial=true GCA_000177335.1|ADFP01000019.1 Genbank CDS 20010 20815 . - 2 ID=cds-EFB91772.1;Parent=gene-HMPREF7215_0768;Dbxref=NCBI_GP:EFB91772.1;Name=EFB91772.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=20815,.;gbkey=CDS;locus_tag=HMPREF7215_0768;partial=true;product=dihydroorotase domain protein;protein_id=EFB91772.1;transl_table=11 ##sequence-region ADFP01000018.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000018.1 Genbank region 1 1053 . + . ID=ADFP01000018.1:1..1053;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000018.1 Genbank gene 1 1031 . - . ID=gene-HMPREF7215_1675;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1675;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000018.1 Genbank CDS 1 1031 . - 0 ID=cds-EFB91773.1;Parent=gene-HMPREF7215_1675;Dbxref=NCBI_GP:EFB91773.1;Name=EFB91773.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00464%3B match to protein family HMM PF01212;gbkey=CDS;gene=glyA;locus_tag=HMPREF7215_1675;partial=true;product=glycine hydroxymethyltransferase;protein_id=EFB91773.1;start_range=.,1;transl_table=11 ##sequence-region ADFP01000017.1 1 9951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000017.1 Genbank region 1 9951 . + . ID=ADFP01000017.1:1..9951;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000017.1 Genbank gene 168 287 . - . ID=gene-HMPREF7215_2155;Name=HMPREF7215_2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2155 GCA_000177335.1|ADFP01000017.1 Genbank CDS 168 287 . - 0 ID=cds-EFB91774.1;Parent=gene-HMPREF7215_2155;Dbxref=NCBI_GP:EFB91774.1;Name=EFB91774.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2155;product=hypothetical protein;protein_id=EFB91774.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 284 1168 . - . ID=gene-HMPREF7215_2156;Name=HMPREF7215_2156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2156 GCA_000177335.1|ADFP01000017.1 Genbank CDS 284 1168 . - 0 ID=cds-EFB91775.1;Parent=gene-HMPREF7215_2156;Dbxref=NCBI_GP:EFB91775.1;Name=EFB91775.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2156;product=transcriptional regulator%2C LysR family;protein_id=EFB91775.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 1312 2493 . + . ID=gene-HMPREF7215_2157;Name=HMPREF7215_2157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2157 GCA_000177335.1|ADFP01000017.1 Genbank CDS 1312 2493 . + 0 ID=cds-EFB91776.1;Parent=gene-HMPREF7215_2157;Dbxref=NCBI_GP:EFB91776.1;Name=EFB91776.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_2157;product=aminotransferase%2C class I/II;protein_id=EFB91776.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 2495 3169 . + . ID=gene-HMPREF7215_2158;Name=HMPREF7215_2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2158 GCA_000177335.1|ADFP01000017.1 Genbank CDS 2495 3169 . + 0 ID=cds-EFB91777.1;Parent=gene-HMPREF7215_2158;Dbxref=NCBI_GP:EFB91777.1;Name=EFB91777.1;Note=identified by match to protein family HMM PF03737;gbkey=CDS;locus_tag=HMPREF7215_2158;product=demethylmenaquinone methyltransferase;protein_id=EFB91777.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 3247 4473 . + . ID=gene-HMPREF7215_2159;Name=HMPREF7215_2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2159 GCA_000177335.1|ADFP01000017.1 Genbank CDS 3247 4473 . + 0 ID=cds-EFB91778.1;Parent=gene-HMPREF7215_2159;Dbxref=NCBI_GP:EFB91778.1;Name=EFB91778.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=HMPREF7215_2159;product=transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein;protein_id=EFB91778.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 4578 5591 . - . ID=gene-HMPREF7215_2160;Name=HMPREF7215_2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2160 GCA_000177335.1|ADFP01000017.1 Genbank CDS 4578 5591 . - 0 ID=cds-EFB91779.1;Parent=gene-HMPREF7215_2160;Dbxref=NCBI_GP:EFB91779.1;Name=EFB91779.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2160;product=LysR substrate binding domain protein;protein_id=EFB91779.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 5642 5824 . - . ID=gene-HMPREF7215_2161;Name=HMPREF7215_2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2161 GCA_000177335.1|ADFP01000017.1 Genbank CDS 5642 5824 . - 0 ID=cds-EFB91780.1;Parent=gene-HMPREF7215_2161;Dbxref=NCBI_GP:EFB91780.1;Name=EFB91780.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2161;product=hypothetical protein;protein_id=EFB91780.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 5840 7513 . + . ID=gene-HMPREF7215_2162;Name=HMPREF7215_2162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2162 GCA_000177335.1|ADFP01000017.1 Genbank CDS 5840 7513 . + 0 ID=cds-EFB91781.1;Parent=gene-HMPREF7215_2162;Dbxref=NCBI_GP:EFB91781.1;Name=EFB91781.1;Note=identified by match to protein family HMM PF00920;gbkey=CDS;locus_tag=HMPREF7215_2162;product=putative dihydroxy-acid dehydratase;protein_id=EFB91781.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 7542 8834 . + . ID=gene-HMPREF7215_2163;Name=HMPREF7215_2163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2163 GCA_000177335.1|ADFP01000017.1 Genbank CDS 7542 8834 . + 0 ID=cds-EFB91782.1;Parent=gene-HMPREF7215_2163;Dbxref=NCBI_GP:EFB91782.1;Name=EFB91782.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF7215_2163;product=citrate transporter;protein_id=EFB91782.1;transl_table=11 GCA_000177335.1|ADFP01000017.1 Genbank gene 8864 9724 . + . ID=gene-HMPREF7215_2164;Name=HMPREF7215_2164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2164 GCA_000177335.1|ADFP01000017.1 Genbank CDS 8864 9724 . + 0 ID=cds-EFB91783.1;Parent=gene-HMPREF7215_2164;Dbxref=NCBI_GP:EFB91783.1;Name=EFB91783.1;gbkey=CDS;locus_tag=HMPREF7215_2164;product=hypothetical protein;protein_id=EFB91783.1;transl_table=11 ##sequence-region ADFP01000016.1 1 32428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000016.1 Genbank region 1 32428 . + . ID=ADFP01000016.1:1..32428;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000016.1 Genbank gene 79 435 . - . ID=gene-HMPREF7215_0516;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF7215_0516 GCA_000177335.1|ADFP01000016.1 Genbank CDS 79 435 . - 0 ID=cds-EFB91784.1;Parent=gene-HMPREF7215_0516;Dbxref=NCBI_GP:EFB91784.1;Name=EFB91784.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032;gbkey=CDS;gene=rplT;locus_tag=HMPREF7215_0516;product=ribosomal protein L20;protein_id=EFB91784.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 463 663 . - . ID=gene-HMPREF7215_0517;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=HMPREF7215_0517 GCA_000177335.1|ADFP01000016.1 Genbank CDS 463 663 . - 0 ID=cds-EFB91785.1;Parent=gene-HMPREF7215_0517;Dbxref=NCBI_GP:EFB91785.1;Name=EFB91785.1;Note=identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;locus_tag=HMPREF7215_0517;product=ribosomal protein L35;protein_id=EFB91785.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 691 1272 . - . ID=gene-HMPREF7215_0518;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0518 GCA_000177335.1|ADFP01000016.1 Genbank CDS 691 1272 . - 0 ID=cds-EFB91786.1;Parent=gene-HMPREF7215_0518;Dbxref=NCBI_GP:EFB91786.1;Name=EFB91786.1;Note=identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;locus_tag=HMPREF7215_0518;product=translation initiation factor IF-3;protein_id=EFB91786.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 1561 1686 . - . ID=gene-HMPREF7215_0519;Name=HMPREF7215_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0519 GCA_000177335.1|ADFP01000016.1 Genbank CDS 1561 1686 . - 0 ID=cds-EFB91787.1;Parent=gene-HMPREF7215_0519;Dbxref=NCBI_GP:EFB91787.1;Name=EFB91787.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0519;product=hypothetical protein;protein_id=EFB91787.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 1692 1982 . - . ID=gene-HMPREF7215_0520;Name=HMPREF7215_0520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0520 GCA_000177335.1|ADFP01000016.1 Genbank CDS 1692 1982 . - 0 ID=cds-EFB91788.1;Parent=gene-HMPREF7215_0520;Dbxref=NCBI_GP:EFB91788.1;Name=EFB91788.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_0520;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91788.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 1979 2257 . - . ID=gene-HMPREF7215_0521;Name=HMPREF7215_0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0521 GCA_000177335.1|ADFP01000016.1 Genbank CDS 1979 2257 . - 0 ID=cds-EFB91789.1;Parent=gene-HMPREF7215_0521;Dbxref=NCBI_GP:EFB91789.1;Name=EFB91789.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=HMPREF7215_0521;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91789.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 2665 3009 . - . ID=gene-HMPREF7215_0522;Name=HMPREF7215_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0522 GCA_000177335.1|ADFP01000016.1 Genbank CDS 2665 3009 . - 0 ID=cds-EFB91790.1;Parent=gene-HMPREF7215_0522;Dbxref=NCBI_GP:EFB91790.1;Name=EFB91790.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0522;product=hypothetical protein;protein_id=EFB91790.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 3063 3383 . - . ID=gene-HMPREF7215_0523;Name=HMPREF7215_0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0523 GCA_000177335.1|ADFP01000016.1 Genbank CDS 3063 3383 . - 0 ID=cds-EFB91791.1;Parent=gene-HMPREF7215_0523;Dbxref=NCBI_GP:EFB91791.1;Name=EFB91791.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0523;product=hypothetical protein;protein_id=EFB91791.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 3677 3793 . + . ID=gene-HMPREF7215_0524;Name=HMPREF7215_0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0524 GCA_000177335.1|ADFP01000016.1 Genbank CDS 3677 3793 . + 0 ID=cds-EFB91792.1;Parent=gene-HMPREF7215_0524;Dbxref=NCBI_GP:EFB91792.1;Name=EFB91792.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0524;product=hypothetical protein;protein_id=EFB91792.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 3835 4143 . - . ID=gene-HMPREF7215_0525;Name=HMPREF7215_0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0525 GCA_000177335.1|ADFP01000016.1 Genbank CDS 3835 4143 . - 0 ID=cds-EFB91793.1;Parent=gene-HMPREF7215_0525;Dbxref=NCBI_GP:EFB91793.1;Name=EFB91793.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=HMPREF7215_0525;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91793.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 4430 6352 . - . ID=gene-HMPREF7215_0526;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HMPREF7215_0526 GCA_000177335.1|ADFP01000016.1 Genbank CDS 4430 6352 . - 0 ID=cds-EFB91794.1;Parent=gene-HMPREF7215_0526;Dbxref=NCBI_GP:EFB91794.1;Name=EFB91794.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418;gbkey=CDS;gene=thrS;locus_tag=HMPREF7215_0526;product=threonine--tRNA ligase;protein_id=EFB91794.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 6434 6871 . - . ID=gene-HMPREF7215_0527;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=HMPREF7215_0527 GCA_000177335.1|ADFP01000016.1 Genbank CDS 6434 6871 . - 0 ID=cds-EFB91795.1;Parent=gene-HMPREF7215_0527;Dbxref=NCBI_GP:EFB91795.1;Name=EFB91795.1;Note=identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576;gbkey=CDS;gene=dut;locus_tag=HMPREF7215_0527;product=dUTP diphosphatase;protein_id=EFB91795.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 6874 9129 . - . ID=gene-HMPREF7215_0528;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=HMPREF7215_0528 GCA_000177335.1|ADFP01000016.1 Genbank CDS 6874 9129 . - 0 ID=cds-EFB91796.1;Parent=gene-HMPREF7215_0528;Dbxref=NCBI_GP:EFB91796.1;Name=EFB91796.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591;gbkey=CDS;gene=pnp;locus_tag=HMPREF7215_0528;product=polyribonucleotide nucleotidyltransferase;protein_id=EFB91796.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 9327 9593 . - . ID=gene-HMPREF7215_0529;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=HMPREF7215_0529 GCA_000177335.1|ADFP01000016.1 Genbank CDS 9327 9593 . - 0 ID=cds-EFB91797.1;Parent=gene-HMPREF7215_0529;Dbxref=NCBI_GP:EFB91797.1;Name=EFB91797.1;Note=identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952;gbkey=CDS;gene=rpsO;locus_tag=HMPREF7215_0529;product=ribosomal protein S15;protein_id=EFB91797.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 9807 11033 . - . ID=gene-HMPREF7215_0530;Name=HMPREF7215_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0530 GCA_000177335.1|ADFP01000016.1 Genbank CDS 9807 11033 . - 0 ID=cds-EFB91798.1;Parent=gene-HMPREF7215_0530;Dbxref=NCBI_GP:EFB91798.1;Name=EFB91798.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_0530;product=aminotransferase%2C class I/II;protein_id=EFB91798.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 11070 12032 . - . ID=gene-HMPREF7215_0531;Name=HMPREF7215_0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0531 GCA_000177335.1|ADFP01000016.1 Genbank CDS 11070 12032 . - 0 ID=cds-EFB91799.1;Parent=gene-HMPREF7215_0531;Dbxref=NCBI_GP:EFB91799.1;Name=EFB91799.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF04321;gbkey=CDS;locus_tag=HMPREF7215_0531;product=NAD dependent epimerase/dehydratase family protein;protein_id=EFB91799.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 12234 12911 . + . ID=gene-HMPREF7215_0532;Name=HMPREF7215_0532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0532 GCA_000177335.1|ADFP01000016.1 Genbank CDS 12234 12911 . + 0 ID=cds-EFB91800.1;Parent=gene-HMPREF7215_0532;Dbxref=NCBI_GP:EFB91800.1;Name=EFB91800.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_0532;product=transcriptional regulator%2C GntR family;protein_id=EFB91800.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 12964 14673 . - . ID=gene-HMPREF7215_0533;Name=HMPREF7215_0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0533 GCA_000177335.1|ADFP01000016.1 Genbank CDS 12964 14673 . - 0 ID=cds-EFB91801.1;Parent=gene-HMPREF7215_0533;Dbxref=NCBI_GP:EFB91801.1;Name=EFB91801.1;Note=identified by match to protein family HMM PF02463;gbkey=CDS;locus_tag=HMPREF7215_0533;product=putative DNA repair protein RecN;protein_id=EFB91801.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 14666 15541 . - . ID=gene-HMPREF7215_0534;Name=HMPREF7215_0534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0534 GCA_000177335.1|ADFP01000016.1 Genbank CDS 14666 15541 . - 0 ID=cds-EFB91802.1;Parent=gene-HMPREF7215_0534;Dbxref=NCBI_GP:EFB91802.1;Name=EFB91802.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;locus_tag=HMPREF7215_0534;product=NAD(+)/NADH kinase;protein_id=EFB91802.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 15716 16528 . - . ID=gene-HMPREF7215_0535;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0535 GCA_000177335.1|ADFP01000016.1 Genbank CDS 15716 16528 . - 0 ID=cds-EFB91803.1;Parent=gene-HMPREF7215_0535;Dbxref=NCBI_GP:EFB91803.1;Name=EFB91803.1;Note=identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478;gbkey=CDS;gene=rrmJ;locus_tag=HMPREF7215_0535;product=ribosomal RNA large subunit methyltransferase J;protein_id=EFB91803.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 16509 18347 . - . ID=gene-HMPREF7215_0536;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=HMPREF7215_0536 GCA_000177335.1|ADFP01000016.1 Genbank CDS 16509 18347 . - 0 ID=cds-EFB91804.1;Parent=gene-HMPREF7215_0536;Dbxref=NCBI_GP:EFB91804.1;Name=EFB91804.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204;gbkey=CDS;gene=dxs;locus_tag=HMPREF7215_0536;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=EFB91804.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 18349 19242 . - . ID=gene-HMPREF7215_0537;Name=HMPREF7215_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0537 GCA_000177335.1|ADFP01000016.1 Genbank CDS 18349 19242 . - 0 ID=cds-EFB91805.1;Parent=gene-HMPREF7215_0537;Dbxref=NCBI_GP:EFB91805.1;Name=EFB91805.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;locus_tag=HMPREF7215_0537;product=polyprenyl synthetase;protein_id=EFB91805.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 19232 19456 . - . ID=gene-HMPREF7215_0538;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0538 GCA_000177335.1|ADFP01000016.1 Genbank CDS 19232 19456 . - 0 ID=cds-EFB91806.1;Parent=gene-HMPREF7215_0538;Dbxref=NCBI_GP:EFB91806.1;Name=EFB91806.1;Note=identified by match to protein family HMM PF02609;gbkey=CDS;gene=xseB;locus_tag=HMPREF7215_0538;product=exodeoxyribonuclease VII%2C small subunit;protein_id=EFB91806.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 19978 22584 . - . ID=gene-HMPREF7215_0539;Name=HMPREF7215_0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0539 GCA_000177335.1|ADFP01000016.1 Genbank CDS 19978 22584 . - 0 ID=cds-EFB91807.1;Parent=gene-HMPREF7215_0539;Dbxref=NCBI_GP:EFB91807.1;Name=EFB91807.1;Note=identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397;gbkey=CDS;locus_tag=HMPREF7215_0539;product=FtsK/SpoIIIE family protein;protein_id=EFB91807.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 22581 23936 . - . ID=gene-HMPREF7215_0540;Name=HMPREF7215_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0540 GCA_000177335.1|ADFP01000016.1 Genbank CDS 22581 23936 . - 0 ID=cds-EFB91808.1;Parent=gene-HMPREF7215_0540;Dbxref=NCBI_GP:EFB91808.1;Name=EFB91808.1;Note=identified by match to protein family HMM PF01523;gbkey=CDS;locus_tag=HMPREF7215_0540;product=TldD/PmbA family protein;protein_id=EFB91808.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 23936 25069 . - . ID=gene-HMPREF7215_0541;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=HMPREF7215_0541 GCA_000177335.1|ADFP01000016.1 Genbank CDS 23936 25069 . - 0 ID=cds-EFB91809.1;Parent=gene-HMPREF7215_0541;Dbxref=NCBI_GP:EFB91809.1;Name=EFB91809.1;gbkey=CDS;gene=yqeH;locus_tag=HMPREF7215_0541;product=ribosome biogenesis protein GTPase YqeH;protein_id=EFB91809.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 25101 26096 . - . ID=gene-HMPREF7215_0542;Name=HMPREF7215_0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0542 GCA_000177335.1|ADFP01000016.1 Genbank CDS 25101 26096 . - 0 ID=cds-EFB91810.1;Parent=gene-HMPREF7215_0542;Dbxref=NCBI_GP:EFB91810.1;Name=EFB91810.1;Note=identified by match to protein family HMM PF02618;gbkey=CDS;locus_tag=HMPREF7215_0542;product=YceG family protein;protein_id=EFB91810.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 26111 27160 . - . ID=gene-HMPREF7215_0543;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0543 GCA_000177335.1|ADFP01000016.1 Genbank CDS 26111 27160 . - 0 ID=cds-EFB91811.1;Parent=gene-HMPREF7215_0543;Dbxref=NCBI_GP:EFB91811.1;Name=EFB91811.1;Note=identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113;gbkey=CDS;gene=queA;locus_tag=HMPREF7215_0543;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=EFB91811.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 27205 28599 . - . ID=gene-HMPREF7215_0544;Name=HMPREF7215_0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0544 GCA_000177335.1|ADFP01000016.1 Genbank CDS 27205 28599 . - 0 ID=cds-EFB91812.1;Parent=gene-HMPREF7215_0544;Dbxref=NCBI_GP:EFB91812.1;Name=EFB91812.1;Note=identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669;gbkey=CDS;locus_tag=HMPREF7215_0544;product=SpoIID/LytB domain protein;protein_id=EFB91812.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 28616 29659 . - . ID=gene-HMPREF7215_0545;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0545 GCA_000177335.1|ADFP01000016.1 Genbank CDS 28616 29659 . - 0 ID=cds-EFB91813.1;Parent=gene-HMPREF7215_0545;Dbxref=NCBI_GP:EFB91813.1;Name=EFB91813.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635;gbkey=CDS;gene=ruvB;locus_tag=HMPREF7215_0545;product=Holliday junction DNA helicase RuvB;protein_id=EFB91813.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 29672 30283 . - . ID=gene-HMPREF7215_0546;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0546 GCA_000177335.1|ADFP01000016.1 Genbank CDS 29672 30283 . - 0 ID=cds-EFB91814.1;Parent=gene-HMPREF7215_0546;Dbxref=NCBI_GP:EFB91814.1;Name=EFB91814.1;Note=identified by match to protein family HMM PF01330;gbkey=CDS;gene=ruvA;locus_tag=HMPREF7215_0546;product=Holliday junction DNA helicase RuvA domain protein;protein_id=EFB91814.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 30290 30808 . - . ID=gene-HMPREF7215_0547;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HMPREF7215_0547 GCA_000177335.1|ADFP01000016.1 Genbank CDS 30290 30808 . - 0 ID=cds-EFB91815.1;Parent=gene-HMPREF7215_0547;Dbxref=NCBI_GP:EFB91815.1;Name=EFB91815.1;Note=crossover junction endodeoxyribonuclease RuvC (Holliday junction nuclease ruvC) (Holliday junction resolvase ruvC);gbkey=CDS;gene=ruvC;locus_tag=HMPREF7215_0547;product=crossover junction endodeoxyribonuclease RuvC;protein_id=EFB91815.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 30792 31547 . - . ID=gene-HMPREF7215_0548;Name=HMPREF7215_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0548 GCA_000177335.1|ADFP01000016.1 Genbank CDS 30792 31547 . - 0 ID=cds-EFB91816.1;Parent=gene-HMPREF7215_0548;Dbxref=NCBI_GP:EFB91816.1;Name=EFB91816.1;Note=identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;locus_tag=HMPREF7215_0548;product=DNA-binding regulatory protein%2C YebC/PmpR family;protein_id=EFB91816.1;transl_table=11 GCA_000177335.1|ADFP01000016.1 Genbank gene 31608 32342 . - . ID=gene-HMPREF7215_0549;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=HMPREF7215_0549 GCA_000177335.1|ADFP01000016.1 Genbank CDS 31608 32342 . - 0 ID=cds-EFB91817.1;Parent=gene-HMPREF7215_0549;Dbxref=NCBI_GP:EFB91817.1;Name=EFB91817.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF02540%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00552;gbkey=CDS;gene=nadE;locus_tag=HMPREF7215_0549;product=NAD+ synthase;protein_id=EFB91817.1;transl_table=11 ##sequence-region ADFP01000015.1 1 14408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000015.1 Genbank region 1 14408 . + . ID=ADFP01000015.1:1..14408;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000015.1 Genbank gene 1 404 . + . ID=gene-HMPREF7215_1416;Name=HMPREF7215_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1416;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000015.1 Genbank CDS 1 404 . + 2 ID=cds-EFB91818.1;Parent=gene-HMPREF7215_1416;Dbxref=NCBI_GP:EFB91818.1;Name=EFB91818.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1416;partial=true;product=hypothetical protein;protein_id=EFB91818.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 454 609 . + . ID=gene-HMPREF7215_1417;Name=HMPREF7215_1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1417 GCA_000177335.1|ADFP01000015.1 Genbank CDS 454 609 . + 0 ID=cds-EFB91819.1;Parent=gene-HMPREF7215_1417;Dbxref=NCBI_GP:EFB91819.1;Name=EFB91819.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1417;product=hypothetical protein;protein_id=EFB91819.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 566 2047 . + . ID=gene-HMPREF7215_1418;Name=HMPREF7215_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1418 GCA_000177335.1|ADFP01000015.1 Genbank CDS 566 2047 . + 0 ID=cds-EFB91820.1;Parent=gene-HMPREF7215_1418;Dbxref=NCBI_GP:EFB91820.1;Name=EFB91820.1;Note=identified by match to protein family HMM PF03606%3B match to protein family HMM PF03806;gbkey=CDS;locus_tag=HMPREF7215_1418;product=C4-dicarboxylate anaerobic carrier;protein_id=EFB91820.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 2051 3247 . + . ID=gene-HMPREF7215_1419;Name=HMPREF7215_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1419 GCA_000177335.1|ADFP01000015.1 Genbank CDS 2051 3247 . + 0 ID=cds-EFB91821.1;Parent=gene-HMPREF7215_1419;Dbxref=NCBI_GP:EFB91821.1;Name=EFB91821.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_1419;product=amidohydrolase;protein_id=EFB91821.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 3301 4152 . - . ID=gene-HMPREF7215_1420;Name=HMPREF7215_1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1420 GCA_000177335.1|ADFP01000015.1 Genbank CDS 3301 4152 . - 0 ID=cds-EFB91822.1;Parent=gene-HMPREF7215_1420;Dbxref=NCBI_GP:EFB91822.1;Name=EFB91822.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF7215_1420;product=putative membrane protein;protein_id=EFB91822.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 4201 4365 . - . ID=gene-HMPREF7215_1421;Name=HMPREF7215_1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1421 GCA_000177335.1|ADFP01000015.1 Genbank CDS 4201 4365 . - 0 ID=cds-EFB91823.1;Parent=gene-HMPREF7215_1421;Dbxref=NCBI_GP:EFB91823.1;Name=EFB91823.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1421;product=hypothetical protein;protein_id=EFB91823.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 4362 4724 . - . ID=gene-HMPREF7215_1422;Name=HMPREF7215_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1422 GCA_000177335.1|ADFP01000015.1 Genbank CDS 4362 4724 . - 0 ID=cds-EFB91824.1;Parent=gene-HMPREF7215_1422;Dbxref=NCBI_GP:EFB91824.1;Name=EFB91824.1;gbkey=CDS;locus_tag=HMPREF7215_1422;product=hypothetical protein;protein_id=EFB91824.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 4756 5709 . - . ID=gene-HMPREF7215_1423;Name=HMPREF7215_1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1423 GCA_000177335.1|ADFP01000015.1 Genbank CDS 4756 5709 . - 0 ID=cds-EFB91825.1;Parent=gene-HMPREF7215_1423;Dbxref=NCBI_GP:EFB91825.1;Name=EFB91825.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_1423;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91825.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 5696 6502 . - . ID=gene-HMPREF7215_1424;Name=HMPREF7215_1424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1424 GCA_000177335.1|ADFP01000015.1 Genbank CDS 5696 6502 . - 0 ID=cds-EFB91826.1;Parent=gene-HMPREF7215_1424;Dbxref=NCBI_GP:EFB91826.1;Name=EFB91826.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1424;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91826.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 6547 7554 . - . ID=gene-HMPREF7215_1425;Name=HMPREF7215_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1425 GCA_000177335.1|ADFP01000015.1 Genbank CDS 6547 7554 . - 0 ID=cds-EFB91827.1;Parent=gene-HMPREF7215_1425;Dbxref=NCBI_GP:EFB91827.1;Name=EFB91827.1;gbkey=CDS;locus_tag=HMPREF7215_1425;product=hypothetical protein;protein_id=EFB91827.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 7866 8645 . - . ID=gene-HMPREF7215_1426;Name=HMPREF7215_1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1426 GCA_000177335.1|ADFP01000015.1 Genbank CDS 7866 8645 . - 0 ID=cds-EFB91828.1;Parent=gene-HMPREF7215_1426;Dbxref=NCBI_GP:EFB91828.1;Name=EFB91828.1;Note=identified by match to protein family HMM PF02596;gbkey=CDS;locus_tag=HMPREF7215_1426;product=hypothetical protein;protein_id=EFB91828.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 8645 9454 . - . ID=gene-HMPREF7215_1427;Name=HMPREF7215_1427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1427 GCA_000177335.1|ADFP01000015.1 Genbank CDS 8645 9454 . - 0 ID=cds-EFB91829.1;Parent=gene-HMPREF7215_1427;Dbxref=NCBI_GP:EFB91829.1;Name=EFB91829.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;locus_tag=HMPREF7215_1427;product=NLPA lipoprotein;protein_id=EFB91829.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 9479 10165 . - . ID=gene-HMPREF7215_1428;Name=HMPREF7215_1428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1428 GCA_000177335.1|ADFP01000015.1 Genbank CDS 9479 10165 . - 0 ID=cds-EFB91830.1;Parent=gene-HMPREF7215_1428;Dbxref=NCBI_GP:EFB91830.1;Name=EFB91830.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1428;product=ABC transporter%2C permease protein;protein_id=EFB91830.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 10168 10986 . - . ID=gene-HMPREF7215_1429;Name=HMPREF7215_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1429 GCA_000177335.1|ADFP01000015.1 Genbank CDS 10168 10986 . - 0 ID=cds-EFB91831.1;Parent=gene-HMPREF7215_1429;Dbxref=NCBI_GP:EFB91831.1;Name=EFB91831.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1429;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91831.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 10995 11153 . + . ID=gene-HMPREF7215_1430;Name=HMPREF7215_1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1430 GCA_000177335.1|ADFP01000015.1 Genbank CDS 10995 11153 . + 0 ID=cds-EFB91832.1;Parent=gene-HMPREF7215_1430;Dbxref=NCBI_GP:EFB91832.1;Name=EFB91832.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1430;product=hypothetical protein;protein_id=EFB91832.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 11284 12591 . - . ID=gene-HMPREF7215_1431;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=HMPREF7215_1431 GCA_000177335.1|ADFP01000015.1 Genbank CDS 11284 12591 . - 0 ID=cds-EFB91833.1;Parent=gene-HMPREF7215_1431;Dbxref=NCBI_GP:EFB91833.1;Name=EFB91833.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457;gbkey=CDS;gene=asnS;locus_tag=HMPREF7215_1431;product=asparagine--tRNA ligase;protein_id=EFB91833.1;transl_table=11 GCA_000177335.1|ADFP01000015.1 Genbank gene 12582 14408 . + . ID=gene-HMPREF7215_1432;Name=HMPREF7215_1432;end_range=14408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1432;partial=true GCA_000177335.1|ADFP01000015.1 Genbank CDS 12582 14408 . + 0 ID=cds-EFB91834.1;Parent=gene-HMPREF7215_1432;Dbxref=NCBI_GP:EFB91834.1;Name=EFB91834.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00501;end_range=14408,.;gbkey=CDS;locus_tag=HMPREF7215_1432;partial=true;product=AMP-binding enzyme;protein_id=EFB91834.1;transl_table=11 ##sequence-region ADFP01000014.1 1 30179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000014.1 Genbank region 1 30179 . + . ID=ADFP01000014.1:1..30179;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000014.1 Genbank gene 1 213 . - . ID=gene-HMPREF7215_1737;Name=HMPREF7215_1737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1737;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000014.1 Genbank CDS 1 213 . - 0 ID=cds-EFB91835.1;Parent=gene-HMPREF7215_1737;Dbxref=NCBI_GP:EFB91835.1;Name=EFB91835.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1737;partial=true;product=hypothetical protein;protein_id=EFB91835.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 416 1234 . + . ID=gene-HMPREF7215_1738;Name=HMPREF7215_1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1738 GCA_000177335.1|ADFP01000014.1 Genbank CDS 416 1234 . + 0 ID=cds-EFB91836.1;Parent=gene-HMPREF7215_1738;Dbxref=NCBI_GP:EFB91836.1;Name=EFB91836.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF7215_1738;product=transcriptional regulator%2C IclR family%2C C-terminal domain protein;protein_id=EFB91836.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 1426 3012 . - . ID=gene-HMPREF7215_1739;Name=HMPREF7215_1739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1739 GCA_000177335.1|ADFP01000014.1 Genbank CDS 1426 3012 . - 0 ID=cds-EFB91837.1;Parent=gene-HMPREF7215_1739;Dbxref=NCBI_GP:EFB91837.1;Name=EFB91837.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF7215_1739;product=arylsulfatase;protein_id=EFB91837.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 3131 4516 . - . ID=gene-HMPREF7215_1740;Name=HMPREF7215_1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1740 GCA_000177335.1|ADFP01000014.1 Genbank CDS 3131 4516 . - 0 ID=cds-EFB91838.1;Parent=gene-HMPREF7215_1740;Dbxref=NCBI_GP:EFB91838.1;Name=EFB91838.1;Note=identified by match to protein family HMM PF00209;gbkey=CDS;locus_tag=HMPREF7215_1740;product=Sodium:neurotransmitter symporter family protein;protein_id=EFB91838.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 4631 4987 . - . ID=gene-HMPREF7215_1741;Name=HMPREF7215_1741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1741 GCA_000177335.1|ADFP01000014.1 Genbank CDS 4631 4987 . - 0 ID=cds-EFB91839.1;Parent=gene-HMPREF7215_1741;Dbxref=NCBI_GP:EFB91839.1;Name=EFB91839.1;gbkey=CDS;locus_tag=HMPREF7215_1741;product=hypothetical protein;protein_id=EFB91839.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 5183 5422 . - . ID=gene-HMPREF7215_1742;Name=HMPREF7215_1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1742 GCA_000177335.1|ADFP01000014.1 Genbank CDS 5183 5422 . - 0 ID=cds-EFB91840.1;Parent=gene-HMPREF7215_1742;Dbxref=NCBI_GP:EFB91840.1;Name=EFB91840.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_1742;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase domain protein;protein_id=EFB91840.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 5450 6496 . - . ID=gene-HMPREF7215_1743;Name=HMPREF7215_1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1743 GCA_000177335.1|ADFP01000014.1 Genbank CDS 5450 6496 . - 0 ID=cds-EFB91841.1;Parent=gene-HMPREF7215_1743;Dbxref=NCBI_GP:EFB91841.1;Name=EFB91841.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF07355%3B match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_1743;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family;protein_id=EFB91841.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 6510 7796 . - . ID=gene-HMPREF7215_1744;Name=grdE;gbkey=Gene;gene=grdE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1744 GCA_000177335.1|ADFP01000014.1 Genbank CDS 6510 7796 . - 0 ID=cds-EFB91842.1;Parent=gene-HMPREF7215_1744;Dbxref=NCBI_GP:EFB91842.1;Name=EFB91842.1;Note=identified by match to protein family HMM PF09338;gbkey=CDS;gene=grdE;locus_tag=HMPREF7215_1744;product=glycine reductase%2C subunit ABC;protein_id=EFB91842.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 7953 9251 . + . ID=gene-HMPREF7215_1745;Name=HMPREF7215_1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1745 GCA_000177335.1|ADFP01000014.1 Genbank CDS 7953 9251 . + 0 ID=cds-EFB91843.1;Parent=gene-HMPREF7215_1745;Dbxref=NCBI_GP:EFB91843.1;Name=EFB91843.1;gbkey=CDS;locus_tag=HMPREF7215_1745;product=carbohydrate diacid transcriptional activator CdaR;protein_id=EFB91843.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 9348 9830 . - . ID=gene-HMPREF7215_1746;Name=HMPREF7215_1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1746 GCA_000177335.1|ADFP01000014.1 Genbank CDS 9348 9830 . - 0 ID=cds-EFB91844.1;Parent=gene-HMPREF7215_1746;Dbxref=NCBI_GP:EFB91844.1;Name=EFB91844.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;locus_tag=HMPREF7215_1746;product=YbaK/proline--tRNA ligase associated domain protein;protein_id=EFB91844.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 10044 10706 . - . ID=gene-HMPREF7215_1747;Name=HMPREF7215_1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1747 GCA_000177335.1|ADFP01000014.1 Genbank CDS 10044 10706 . - 0 ID=cds-EFB91845.1;Parent=gene-HMPREF7215_1747;Dbxref=NCBI_GP:EFB91845.1;Name=EFB91845.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;locus_tag=HMPREF7215_1747;product=transcriptional regulator%2C LuxR family;protein_id=EFB91845.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 10882 11325 . + . ID=gene-HMPREF7215_1748;Name=HMPREF7215_1748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1748 GCA_000177335.1|ADFP01000014.1 Genbank CDS 10882 11325 . + 0 ID=cds-EFB91846.1;Parent=gene-HMPREF7215_1748;Dbxref=NCBI_GP:EFB91846.1;Name=EFB91846.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1748;product=hypothetical protein;protein_id=EFB91846.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 11462 12796 . - . ID=gene-HMPREF7215_1749;Name=HMPREF7215_1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1749 GCA_000177335.1|ADFP01000014.1 Genbank CDS 11462 12796 . - 0 ID=cds-EFB91847.1;Parent=gene-HMPREF7215_1749;Dbxref=NCBI_GP:EFB91847.1;Name=EFB91847.1;Note=identified by match to protein family HMM PF03051;gbkey=CDS;locus_tag=HMPREF7215_1749;product=peptidase C1-like family;protein_id=EFB91847.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 12904 14097 . - . ID=gene-HMPREF7215_1750;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1750 GCA_000177335.1|ADFP01000014.1 Genbank CDS 12904 14097 . - 0 ID=cds-EFB91848.1;Parent=gene-HMPREF7215_1750;Dbxref=NCBI_GP:EFB91848.1;Name=EFB91848.1;Note=identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521;gbkey=CDS;gene=coaBC;locus_tag=HMPREF7215_1750;product=phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase;protein_id=EFB91848.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 14286 15065 . + . ID=gene-HMPREF7215_1751;Name=HMPREF7215_1751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1751 GCA_000177335.1|ADFP01000014.1 Genbank CDS 14286 15065 . + 0 ID=cds-EFB91849.1;Parent=gene-HMPREF7215_1751;Dbxref=NCBI_GP:EFB91849.1;Name=EFB91849.1;Note=identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671;gbkey=CDS;locus_tag=HMPREF7215_1751;product=putative pantothenate kinase;protein_id=EFB91849.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 15072 15542 . + . ID=gene-HMPREF7215_1752;Name=HMPREF7215_1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1752 GCA_000177335.1|ADFP01000014.1 Genbank CDS 15072 15542 . + 0 ID=cds-EFB91850.1;Parent=gene-HMPREF7215_1752;Dbxref=NCBI_GP:EFB91850.1;Name=EFB91850.1;gbkey=CDS;locus_tag=HMPREF7215_1752;product=hypothetical protein;protein_id=EFB91850.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 15624 16523 . - . ID=gene-HMPREF7215_1753;Name=HMPREF7215_1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1753 GCA_000177335.1|ADFP01000014.1 Genbank CDS 15624 16523 . - 0 ID=cds-EFB91851.1;Parent=gene-HMPREF7215_1753;Dbxref=NCBI_GP:EFB91851.1;Name=EFB91851.1;Note=identified by match to protein family HMM PF03773;gbkey=CDS;locus_tag=HMPREF7215_1753;product=putative permease;protein_id=EFB91851.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 16516 17457 . - . ID=gene-HMPREF7215_1754;Name=HMPREF7215_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1754 GCA_000177335.1|ADFP01000014.1 Genbank CDS 16516 17457 . - 0 ID=cds-EFB91852.1;Parent=gene-HMPREF7215_1754;Dbxref=NCBI_GP:EFB91852.1;Name=EFB91852.1;gbkey=CDS;locus_tag=HMPREF7215_1754;product=hypothetical protein;protein_id=EFB91852.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 17456 18346 . + . ID=gene-HMPREF7215_1755;Name=HMPREF7215_1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1755 GCA_000177335.1|ADFP01000014.1 Genbank CDS 17456 18346 . + 0 ID=cds-EFB91853.1;Parent=gene-HMPREF7215_1755;Dbxref=NCBI_GP:EFB91853.1;Name=EFB91853.1;Note=identified by match to protein family HMM PF00023;gbkey=CDS;locus_tag=HMPREF7215_1755;product=ankyrin repeat protein;protein_id=EFB91853.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 18543 19157 . + . ID=gene-HMPREF7215_1756;Name=HMPREF7215_1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1756 GCA_000177335.1|ADFP01000014.1 Genbank CDS 18543 19157 . + 0 ID=cds-EFB91854.1;Parent=gene-HMPREF7215_1756;Dbxref=NCBI_GP:EFB91854.1;Name=EFB91854.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF7215_1756;product=transcriptional regulator%2C TetR family;protein_id=EFB91854.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 19228 20994 . + . ID=gene-HMPREF7215_1757;Name=HMPREF7215_1757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1757 GCA_000177335.1|ADFP01000014.1 Genbank CDS 19228 20994 . + 0 ID=cds-EFB91855.1;Parent=gene-HMPREF7215_1757;Dbxref=NCBI_GP:EFB91855.1;Name=EFB91855.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1757;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91855.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 20988 22718 . + . ID=gene-HMPREF7215_1758;Name=HMPREF7215_1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1758 GCA_000177335.1|ADFP01000014.1 Genbank CDS 20988 22718 . + 0 ID=cds-EFB91856.1;Parent=gene-HMPREF7215_1758;Dbxref=NCBI_GP:EFB91856.1;Name=EFB91856.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF7215_1758;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91856.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 22745 22930 . + . ID=gene-HMPREF7215_1759;Name=HMPREF7215_1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1759 GCA_000177335.1|ADFP01000014.1 Genbank CDS 22745 22930 . + 0 ID=cds-EFB91857.1;Parent=gene-HMPREF7215_1759;Dbxref=NCBI_GP:EFB91857.1;Name=EFB91857.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1759;product=hypothetical protein;protein_id=EFB91857.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 23055 23174 . + . ID=gene-HMPREF7215_1760;Name=HMPREF7215_1760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1760 GCA_000177335.1|ADFP01000014.1 Genbank CDS 23055 23174 . + 0 ID=cds-EFB91858.1;Parent=gene-HMPREF7215_1760;Dbxref=NCBI_GP:EFB91858.1;Name=EFB91858.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1760;product=hypothetical protein;protein_id=EFB91858.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 23207 23383 . + . ID=gene-HMPREF7215_1761;Name=HMPREF7215_1761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1761 GCA_000177335.1|ADFP01000014.1 Genbank CDS 23207 23383 . + 0 ID=cds-EFB91859.1;Parent=gene-HMPREF7215_1761;Dbxref=NCBI_GP:EFB91859.1;Name=EFB91859.1;gbkey=CDS;locus_tag=HMPREF7215_1761;product=hypothetical protein;protein_id=EFB91859.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 23843 24868 . - . ID=gene-HMPREF7215_1762;Name=HMPREF7215_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1762 GCA_000177335.1|ADFP01000014.1 Genbank CDS 23843 24868 . - 0 ID=cds-EFB91860.1;Parent=gene-HMPREF7215_1762;Dbxref=NCBI_GP:EFB91860.1;Name=EFB91860.1;Note=identified by match to protein family HMM PF01113;gbkey=CDS;locus_tag=HMPREF7215_1762;product=dihydrodipicolinate reductase domain protein;protein_id=EFB91860.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 25045 25938 . - . ID=gene-HMPREF7215_1763;Name=HMPREF7215_1763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1763 GCA_000177335.1|ADFP01000014.1 Genbank CDS 25045 25938 . - 0 ID=cds-EFB91861.1;Parent=gene-HMPREF7215_1763;Dbxref=NCBI_GP:EFB91861.1;Name=EFB91861.1;Note=identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278;gbkey=CDS;locus_tag=HMPREF7215_1763;product=transcriptional regulator%2C MerR family;protein_id=EFB91861.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 27351 27644 . - . ID=gene-HMPREF7215_1764;Name=HMPREF7215_1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1764 GCA_000177335.1|ADFP01000014.1 Genbank CDS 27351 27644 . - 0 ID=cds-EFB91862.1;Parent=gene-HMPREF7215_1764;Dbxref=NCBI_GP:EFB91862.1;Name=EFB91862.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF7215_1764;product=addiction module toxin%2C RelE/StbE family;protein_id=EFB91862.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 27631 27891 . - . ID=gene-HMPREF7215_1765;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=HMPREF7215_1765 GCA_000177335.1|ADFP01000014.1 Genbank CDS 27631 27891 . - 0 ID=cds-EFB91863.1;Parent=gene-HMPREF7215_1765;Dbxref=NCBI_GP:EFB91863.1;Name=EFB91863.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;gene=dinJ;locus_tag=HMPREF7215_1765;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EFB91863.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 28204 28467 . - . ID=gene-HMPREF7215_1766;Name=HMPREF7215_1766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1766 GCA_000177335.1|ADFP01000014.1 Genbank CDS 28204 28467 . - 0 ID=cds-EFB91864.1;Parent=gene-HMPREF7215_1766;Dbxref=NCBI_GP:EFB91864.1;Name=EFB91864.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1766;product=hypothetical protein;protein_id=EFB91864.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 28530 28754 . - . ID=gene-HMPREF7215_1767;Name=HMPREF7215_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1767 GCA_000177335.1|ADFP01000014.1 Genbank CDS 28530 28754 . - 0 ID=cds-EFB91865.1;Parent=gene-HMPREF7215_1767;Dbxref=NCBI_GP:EFB91865.1;Name=EFB91865.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1767;product=hypothetical protein;protein_id=EFB91865.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 29019 29792 . - . ID=gene-HMPREF7215_1768;Name=HMPREF7215_1768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1768 GCA_000177335.1|ADFP01000014.1 Genbank CDS 29019 29792 . - 0 ID=cds-EFB91866.1;Parent=gene-HMPREF7215_1768;Dbxref=NCBI_GP:EFB91866.1;Name=EFB91866.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1768;product=hypothetical protein;protein_id=EFB91866.1;transl_table=11 GCA_000177335.1|ADFP01000014.1 Genbank gene 29806 30132 . - . ID=gene-HMPREF7215_1769;Name=HMPREF7215_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1769 GCA_000177335.1|ADFP01000014.1 Genbank CDS 29806 30132 . - 0 ID=cds-EFB91867.1;Parent=gene-HMPREF7215_1769;Dbxref=NCBI_GP:EFB91867.1;Name=EFB91867.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1769;product=hypothetical protein;protein_id=EFB91867.1;transl_table=11 ##sequence-region ADFP01000013.1 1 5909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000013.1 Genbank region 1 5909 . + . ID=ADFP01000013.1:1..5909;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000013.1 Genbank gene 1 867 . - . ID=gene-HMPREF7215_0731;Name=HMPREF7215_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0731;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000013.1 Genbank CDS 1 867 . - 0 ID=cds-EFB91868.1;Parent=gene-HMPREF7215_0731;Dbxref=NCBI_GP:EFB91868.1;Name=EFB91868.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00291;gbkey=CDS;locus_tag=HMPREF7215_0731;partial=true;product=putative threonine synthase;protein_id=EFB91868.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000013.1 Genbank gene 1079 2560 . + . ID=gene-HMPREF7215_0732;Name=HMPREF7215_0732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0732 GCA_000177335.1|ADFP01000013.1 Genbank CDS 1079 2560 . + 0 ID=cds-EFB91869.1;Parent=gene-HMPREF7215_0732;Dbxref=NCBI_GP:EFB91869.1;Name=EFB91869.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_0732;product=hypothetical protein;protein_id=EFB91869.1;transl_table=11 GCA_000177335.1|ADFP01000013.1 Genbank gene 2670 3869 . - . ID=gene-HMPREF7215_0733;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0733 GCA_000177335.1|ADFP01000013.1 Genbank CDS 2670 3869 . - 0 ID=cds-EFB91870.1;Parent=gene-HMPREF7215_0733;Dbxref=NCBI_GP:EFB91870.1;Name=EFB91870.1;Note=identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506;gbkey=CDS;gene=ribA;locus_tag=HMPREF7215_0733;product=GTP cyclohydrolase II;protein_id=EFB91870.1;transl_table=11 GCA_000177335.1|ADFP01000013.1 Genbank binding_site 3977 4089 . - . ID=id-ADFP01000013.1:3977..4089;Note=FMN riboswitch (RFN element)%3B Rfam score 99.03;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050 GCA_000177335.1|ADFP01000013.1 Genbank gene 4140 5909 . - . ID=gene-HMPREF7215_0735;Name=HMPREF7215_0735;end_range=5909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0735;partial=true GCA_000177335.1|ADFP01000013.1 Genbank CDS 4140 5909 . - 0 ID=cds-EFB91871.1;Parent=gene-HMPREF7215_0735;Dbxref=NCBI_GP:EFB91871.1;Name=EFB91871.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=5909,.;gbkey=CDS;locus_tag=HMPREF7215_0735;partial=true;product=hypothetical protein;protein_id=EFB91871.1;transl_table=11 ##sequence-region ADFP01000012.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000012.1 Genbank region 1 989 . + . ID=ADFP01000012.1:1..989;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000012.1 Genbank gene 7 989 . + . ID=gene-HMPREF7215_1670;Name=HMPREF7215_1670;end_range=989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1670;partial=true GCA_000177335.1|ADFP01000012.1 Genbank CDS 7 989 . + 0 ID=cds-EFB91872.1;Parent=gene-HMPREF7215_1670;Dbxref=NCBI_GP:EFB91872.1;Name=EFB91872.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;end_range=989,.;gbkey=CDS;locus_tag=HMPREF7215_1670;partial=true;product=Hep/Hag repeat protein;protein_id=EFB91872.1;transl_table=11 ##sequence-region ADFP01000011.1 1 56273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000011.1 Genbank region 1 56273 . + . ID=ADFP01000011.1:1..56273;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000011.1 Genbank gene 1 142 . - . ID=gene-HMPREF7215_1348;Name=HMPREF7215_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1348;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000011.1 Genbank CDS 1 142 . - 0 ID=cds-EFB91873.1;Parent=gene-HMPREF7215_1348;Dbxref=NCBI_GP:EFB91873.1;Name=EFB91873.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1348;partial=true;product=hypothetical protein;protein_id=EFB91873.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 143 1732 . - . ID=gene-HMPREF7215_1349;Name=HMPREF7215_1349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1349 GCA_000177335.1|ADFP01000011.1 Genbank CDS 143 1732 . - 0 ID=cds-EFB91874.1;Parent=gene-HMPREF7215_1349;Dbxref=NCBI_GP:EFB91874.1;Name=EFB91874.1;gbkey=CDS;locus_tag=HMPREF7215_1349;product=putative glycine dehydrogenase subunit 2;protein_id=EFB91874.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 1755 3137 . - . ID=gene-HMPREF7215_1350;Name=HMPREF7215_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1350 GCA_000177335.1|ADFP01000011.1 Genbank CDS 1755 3137 . - 0 ID=cds-EFB91875.1;Parent=gene-HMPREF7215_1350;Dbxref=NCBI_GP:EFB91875.1;Name=EFB91875.1;Note=identified by match to protein family HMM PF02347;gbkey=CDS;locus_tag=HMPREF7215_1350;product=glycine dehydrogenase (decarboxylating);protein_id=EFB91875.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 3172 3954 . - . ID=gene-HMPREF7215_1351;Name=HMPREF7215_1351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1351 GCA_000177335.1|ADFP01000011.1 Genbank CDS 3172 3954 . - 0 ID=cds-EFB91876.1;Parent=gene-HMPREF7215_1351;Dbxref=NCBI_GP:EFB91876.1;Name=EFB91876.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF7215_1351;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFB91876.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 3942 4094 . - . ID=gene-HMPREF7215_1352;Name=HMPREF7215_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1352 GCA_000177335.1|ADFP01000011.1 Genbank CDS 3942 4094 . - 0 ID=cds-EFB91877.1;Parent=gene-HMPREF7215_1352;Dbxref=NCBI_GP:EFB91877.1;Name=EFB91877.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1352;product=hypothetical protein;protein_id=EFB91877.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 4122 4361 . + . ID=gene-HMPREF7215_1353;Name=HMPREF7215_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1353 GCA_000177335.1|ADFP01000011.1 Genbank CDS 4122 4361 . + 0 ID=cds-EFB91878.1;Parent=gene-HMPREF7215_1353;Dbxref=NCBI_GP:EFB91878.1;Name=EFB91878.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1353;product=hypothetical protein;protein_id=EFB91878.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 4428 4901 . - . ID=gene-HMPREF7215_1354;Name=HMPREF7215_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1354 GCA_000177335.1|ADFP01000011.1 Genbank CDS 4428 4901 . - 0 ID=cds-EFB91879.1;Parent=gene-HMPREF7215_1354;Dbxref=NCBI_GP:EFB91879.1;Name=EFB91879.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1354;product=hypothetical protein;protein_id=EFB91879.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 4925 6217 . - . ID=gene-HMPREF7215_1355;Name=HMPREF7215_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1355 GCA_000177335.1|ADFP01000011.1 Genbank CDS 4925 6217 . - 0 ID=cds-EFB91880.1;Parent=gene-HMPREF7215_1355;Dbxref=NCBI_GP:EFB91880.1;Name=EFB91880.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;locus_tag=HMPREF7215_1355;product=CobQ/CobB/MinD/ParA nucleotide binding domain protein;protein_id=EFB91880.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 6320 6904 . + . ID=gene-HMPREF7215_1356;Name=flr;gbkey=Gene;gene=flr;gene_biotype=protein_coding;locus_tag=HMPREF7215_1356 GCA_000177335.1|ADFP01000011.1 Genbank CDS 6320 6904 . + 0 ID=cds-EFB91881.1;Parent=gene-HMPREF7215_1356;Dbxref=NCBI_GP:EFB91881.1;Name=EFB91881.1;gbkey=CDS;gene=flr;locus_tag=HMPREF7215_1356;product=flavoredoxin;protein_id=EFB91881.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 7069 8679 . - . ID=gene-HMPREF7215_1357;Name=HMPREF7215_1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1357 GCA_000177335.1|ADFP01000011.1 Genbank CDS 7069 8679 . - 0 ID=cds-EFB91882.1;Parent=gene-HMPREF7215_1357;Dbxref=NCBI_GP:EFB91882.1;Name=EFB91882.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07908%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1357;product=amidohydrolase family protein;protein_id=EFB91882.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 8930 9073 . - . ID=gene-HMPREF7215_1358;Name=HMPREF7215_1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1358 GCA_000177335.1|ADFP01000011.1 Genbank CDS 8930 9073 . - 0 ID=cds-EFB91883.1;Parent=gene-HMPREF7215_1358;Dbxref=NCBI_GP:EFB91883.1;Name=EFB91883.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1358;product=hypothetical protein;protein_id=EFB91883.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 9091 10020 . + . ID=gene-HMPREF7215_1359;Name=HMPREF7215_1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1359 GCA_000177335.1|ADFP01000011.1 Genbank CDS 9091 10020 . + 0 ID=cds-EFB91884.1;Parent=gene-HMPREF7215_1359;Dbxref=NCBI_GP:EFB91884.1;Name=EFB91884.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1359;product=ABC transporter%2C permease protein;protein_id=EFB91884.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 10034 10888 . + . ID=gene-HMPREF7215_1360;Name=HMPREF7215_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1360 GCA_000177335.1|ADFP01000011.1 Genbank CDS 10034 10888 . + 0 ID=cds-EFB91885.1;Parent=gene-HMPREF7215_1360;Dbxref=NCBI_GP:EFB91885.1;Name=EFB91885.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_1360;product=ABC transporter%2C permease protein;protein_id=EFB91885.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 10903 11901 . + . ID=gene-HMPREF7215_1361;Name=HMPREF7215_1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1361 GCA_000177335.1|ADFP01000011.1 Genbank CDS 10903 11901 . + 0 ID=cds-EFB91886.1;Parent=gene-HMPREF7215_1361;Dbxref=NCBI_GP:EFB91886.1;Name=EFB91886.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1361;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91886.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 11898 12884 . + . ID=gene-HMPREF7215_1362;Name=HMPREF7215_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1362 GCA_000177335.1|ADFP01000011.1 Genbank CDS 11898 12884 . + 0 ID=cds-EFB91887.1;Parent=gene-HMPREF7215_1362;Dbxref=NCBI_GP:EFB91887.1;Name=EFB91887.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_1362;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91887.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 12877 13476 . + . ID=gene-HMPREF7215_1363;Name=HMPREF7215_1363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1363 GCA_000177335.1|ADFP01000011.1 Genbank CDS 12877 13476 . + 0 ID=cds-EFB91888.1;Parent=gene-HMPREF7215_1363;Dbxref=NCBI_GP:EFB91888.1;Name=EFB91888.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1363;product=hypothetical protein;protein_id=EFB91888.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 13536 15089 . + . ID=gene-HMPREF7215_1364;Name=HMPREF7215_1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1364 GCA_000177335.1|ADFP01000011.1 Genbank CDS 13536 15089 . + 0 ID=cds-EFB91889.1;Parent=gene-HMPREF7215_1364;Dbxref=NCBI_GP:EFB91889.1;Name=EFB91889.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1364;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB91889.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 15202 16719 . + . ID=gene-HMPREF7215_1365;Name=HMPREF7215_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1365 GCA_000177335.1|ADFP01000011.1 Genbank CDS 15202 16719 . + 0 ID=cds-EFB91890.1;Parent=gene-HMPREF7215_1365;Dbxref=NCBI_GP:EFB91890.1;Name=EFB91890.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_1365;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB91890.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 16953 18287 . + . ID=gene-HMPREF7215_1366;Name=HMPREF7215_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1366 GCA_000177335.1|ADFP01000011.1 Genbank CDS 16953 18287 . + 0 ID=cds-EFB91891.1;Parent=gene-HMPREF7215_1366;Dbxref=NCBI_GP:EFB91891.1;Name=EFB91891.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_1366;product=MATE efflux family protein;protein_id=EFB91891.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 18316 19704 . - . ID=gene-HMPREF7215_1367;Name=HMPREF7215_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1367 GCA_000177335.1|ADFP01000011.1 Genbank CDS 18316 19704 . - 0 ID=cds-EFB91892.1;Parent=gene-HMPREF7215_1367;Dbxref=NCBI_GP:EFB91892.1;Name=EFB91892.1;Note=identified by match to protein family HMM PF00144;gbkey=CDS;locus_tag=HMPREF7215_1367;product=beta-lactamase;protein_id=EFB91892.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 19701 19898 . - . ID=gene-HMPREF7215_1368;Name=HMPREF7215_1368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1368 GCA_000177335.1|ADFP01000011.1 Genbank CDS 19701 19898 . - 0 ID=cds-EFB91893.1;Parent=gene-HMPREF7215_1368;Dbxref=NCBI_GP:EFB91893.1;Name=EFB91893.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1368;product=hypothetical protein;protein_id=EFB91893.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 19895 20350 . - . ID=gene-HMPREF7215_1369;Name=HMPREF7215_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1369 GCA_000177335.1|ADFP01000011.1 Genbank CDS 19895 20350 . - 0 ID=cds-EFB91894.1;Parent=gene-HMPREF7215_1369;Dbxref=NCBI_GP:EFB91894.1;Name=EFB91894.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1369;product=hypothetical protein;protein_id=EFB91894.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 20687 20833 . - . ID=gene-HMPREF7215_1370;Name=HMPREF7215_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1370 GCA_000177335.1|ADFP01000011.1 Genbank CDS 20687 20833 . - 0 ID=cds-EFB91895.1;Parent=gene-HMPREF7215_1370;Dbxref=NCBI_GP:EFB91895.1;Name=EFB91895.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1370;product=hypothetical protein;protein_id=EFB91895.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 20832 22979 . + . ID=gene-HMPREF7215_1371;Name=HMPREF7215_1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1371 GCA_000177335.1|ADFP01000011.1 Genbank CDS 20832 22979 . + 0 ID=cds-EFB91896.1;Parent=gene-HMPREF7215_1371;Dbxref=NCBI_GP:EFB91896.1;Name=EFB91896.1;Note=identified by match to protein family HMM PF01642;gbkey=CDS;locus_tag=HMPREF7215_1371;product=putative methylmalonyl-CoA mutase%2C small subunit;protein_id=EFB91896.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 22983 25181 . + . ID=gene-HMPREF7215_1372;Name=HMPREF7215_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1372 GCA_000177335.1|ADFP01000011.1 Genbank CDS 22983 25181 . + 0 ID=cds-EFB91897.1;Parent=gene-HMPREF7215_1372;Dbxref=NCBI_GP:EFB91897.1;Name=EFB91897.1;Note=identified by match to protein family HMM PF01642%3B match to protein family HMM PF02310%3B match to protein family HMM TIGR00640%3B match to protein family HMM TIGR00641;gbkey=CDS;locus_tag=HMPREF7215_1372;product=methylmalonyl-CoA mutase;protein_id=EFB91897.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 25214 26344 . + . ID=gene-HMPREF7215_1373;Name=HMPREF7215_1373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1373 GCA_000177335.1|ADFP01000011.1 Genbank CDS 25214 26344 . + 0 ID=cds-EFB91898.1;Parent=gene-HMPREF7215_1373;Dbxref=NCBI_GP:EFB91898.1;Name=EFB91898.1;Note=identified by match to protein family HMM PF03308%3B match to protein family HMM TIGR00750;gbkey=CDS;locus_tag=HMPREF7215_1373;product=LAO/AO transport system ATPase;protein_id=EFB91898.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank binding_site 26468 26659 . + . ID=id-ADFP01000011.1:26468..26659;Note=cobalamin riboswitch%3B Rfam score 108.78;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00174 GCA_000177335.1|ADFP01000011.1 Genbank gene 26745 28307 . + . ID=gene-HMPREF7215_1375;Name=HMPREF7215_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1375 GCA_000177335.1|ADFP01000011.1 Genbank CDS 26745 28307 . + 0 ID=cds-EFB91899.1;Parent=gene-HMPREF7215_1375;Dbxref=NCBI_GP:EFB91899.1;Name=EFB91899.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF7215_1375;product=succinate CoA transferase;protein_id=EFB91899.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 28300 28602 . + . ID=gene-HMPREF7215_1376;Name=HMPREF7215_1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1376 GCA_000177335.1|ADFP01000011.1 Genbank CDS 28300 28602 . + 0 ID=cds-EFB91900.1;Parent=gene-HMPREF7215_1376;Dbxref=NCBI_GP:EFB91900.1;Name=EFB91900.1;gbkey=CDS;locus_tag=HMPREF7215_1376;product=hypothetical protein;protein_id=EFB91900.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 28739 28861 . + . ID=gene-HMPREF7215_1377;Name=HMPREF7215_1377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1377 GCA_000177335.1|ADFP01000011.1 Genbank CDS 28739 28861 . + 0 ID=cds-EFB91901.1;Parent=gene-HMPREF7215_1377;Dbxref=NCBI_GP:EFB91901.1;Name=EFB91901.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1377;product=hypothetical protein;protein_id=EFB91901.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 28858 31242 . + . ID=gene-HMPREF7215_1378;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=HMPREF7215_1378 GCA_000177335.1|ADFP01000011.1 Genbank CDS 28858 31242 . + 0 ID=cds-EFB91902.1;Parent=gene-HMPREF7215_1378;Dbxref=NCBI_GP:EFB91902.1;Name=EFB91902.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR02487;gbkey=CDS;gene=nrdD;locus_tag=HMPREF7215_1378;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=EFB91902.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 31239 31766 . + . ID=gene-HMPREF7215_1379;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=HMPREF7215_1379 GCA_000177335.1|ADFP01000011.1 Genbank CDS 31239 31766 . + 0 ID=cds-EFB91903.1;Parent=gene-HMPREF7215_1379;Dbxref=NCBI_GP:EFB91903.1;Name=EFB91903.1;Note=identified by match to protein family HMM TIGR02491;gbkey=CDS;gene=nrdG;locus_tag=HMPREF7215_1379;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=EFB91903.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 31858 32001 . - . ID=gene-HMPREF7215_1380;Name=HMPREF7215_1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1380 GCA_000177335.1|ADFP01000011.1 Genbank CDS 31858 32001 . - 0 ID=cds-EFB91904.1;Parent=gene-HMPREF7215_1380;Dbxref=NCBI_GP:EFB91904.1;Name=EFB91904.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1380;product=hypothetical protein;protein_id=EFB91904.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 32010 32801 . - . ID=gene-HMPREF7215_1381;Name=HMPREF7215_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1381 GCA_000177335.1|ADFP01000011.1 Genbank CDS 32010 32801 . - 0 ID=cds-EFB91905.1;Parent=gene-HMPREF7215_1381;Dbxref=NCBI_GP:EFB91905.1;Name=EFB91905.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF05175%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF7215_1381;product=methyltransferase domain protein;protein_id=EFB91905.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 32817 32963 . - . ID=gene-HMPREF7215_1382;Name=HMPREF7215_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1382 GCA_000177335.1|ADFP01000011.1 Genbank CDS 32817 32963 . - 0 ID=cds-EFB91906.1;Parent=gene-HMPREF7215_1382;Dbxref=NCBI_GP:EFB91906.1;Name=EFB91906.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1382;product=hypothetical protein;protein_id=EFB91906.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 33379 33906 . - . ID=gene-HMPREF7215_1383;Name=HMPREF7215_1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1383 GCA_000177335.1|ADFP01000011.1 Genbank CDS 33379 33906 . - 0 ID=cds-EFB91907.1;Parent=gene-HMPREF7215_1383;Dbxref=NCBI_GP:EFB91907.1;Name=EFB91907.1;gbkey=CDS;locus_tag=HMPREF7215_1383;product=hypothetical protein;protein_id=EFB91907.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 33903 34154 . - . ID=gene-HMPREF7215_1384;Name=HMPREF7215_1384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1384 GCA_000177335.1|ADFP01000011.1 Genbank CDS 33903 34154 . - 0 ID=cds-EFB91908.1;Parent=gene-HMPREF7215_1384;Dbxref=NCBI_GP:EFB91908.1;Name=EFB91908.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1384;product=hypothetical protein;protein_id=EFB91908.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 34386 36107 . - . ID=gene-HMPREF7215_1385;Name=HMPREF7215_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1385 GCA_000177335.1|ADFP01000011.1 Genbank CDS 34386 36107 . - 0 ID=cds-EFB91909.1;Parent=gene-HMPREF7215_1385;Dbxref=NCBI_GP:EFB91909.1;Name=EFB91909.1;Note=identified by match to protein family HMM PF02652;gbkey=CDS;locus_tag=HMPREF7215_1385;product=transporter%2C lactate permease (LctP) family;protein_id=EFB91909.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 36496 37119 . + . ID=gene-HMPREF7215_1386;Name=HMPREF7215_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1386 GCA_000177335.1|ADFP01000011.1 Genbank CDS 36496 37119 . + 0 ID=cds-EFB91910.1;Parent=gene-HMPREF7215_1386;Dbxref=NCBI_GP:EFB91910.1;Name=EFB91910.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF7215_1386;product=putative dihydroxyacetone kinase regulator;protein_id=EFB91910.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 37116 37937 . + . ID=gene-HMPREF7215_1387;Name=HMPREF7215_1387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1387 GCA_000177335.1|ADFP01000011.1 Genbank CDS 37116 37937 . + 0 ID=cds-EFB91911.1;Parent=gene-HMPREF7215_1387;Dbxref=NCBI_GP:EFB91911.1;Name=EFB91911.1;Note=identified by match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_1387;product=glycine reductase%2C B domain protein;protein_id=EFB91911.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 38115 39383 . + . ID=gene-HMPREF7215_1388;Name=grdE;gbkey=Gene;gene=grdE;gene_biotype=protein_coding;locus_tag=HMPREF7215_1388 GCA_000177335.1|ADFP01000011.1 Genbank CDS 38115 39383 . + 0 ID=cds-EFB91912.1;Parent=gene-HMPREF7215_1388;Dbxref=NCBI_GP:EFB91912.1;Name=EFB91912.1;Note=identified by match to protein family HMM PF09338;gbkey=CDS;gene=grdE;locus_tag=HMPREF7215_1388;product=glycine reductase%2C subunit ABC;protein_id=EFB91912.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 39404 40456 . + . ID=gene-HMPREF7215_1389;Name=HMPREF7215_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1389 GCA_000177335.1|ADFP01000011.1 Genbank CDS 39404 40456 . + 0 ID=cds-EFB91913.1;Parent=gene-HMPREF7215_1389;Dbxref=NCBI_GP:EFB91913.1;Name=EFB91913.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF07355%3B match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_1389;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family;protein_id=EFB91913.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 40484 40723 . + . ID=gene-HMPREF7215_1390;Name=HMPREF7215_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1390 GCA_000177335.1|ADFP01000011.1 Genbank CDS 40484 40723 . + 0 ID=cds-EFB91914.1;Parent=gene-HMPREF7215_1390;Dbxref=NCBI_GP:EFB91914.1;Name=EFB91914.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM TIGR01918;gbkey=CDS;locus_tag=HMPREF7215_1390;product=selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase domain protein;protein_id=EFB91914.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 40878 41759 . + . ID=gene-HMPREF7215_1391;Name=HMPREF7215_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1391 GCA_000177335.1|ADFP01000011.1 Genbank CDS 40878 41759 . + 0 ID=cds-EFB91915.1;Parent=gene-HMPREF7215_1391;Dbxref=NCBI_GP:EFB91915.1;Name=EFB91915.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;locus_tag=HMPREF7215_1391;product=hydrolase%2C alpha/beta domain protein;protein_id=EFB91915.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 41846 42586 . + . ID=gene-HMPREF7215_1392;Name=HMPREF7215_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1392 GCA_000177335.1|ADFP01000011.1 Genbank CDS 41846 42586 . + 0 ID=cds-EFB91916.1;Parent=gene-HMPREF7215_1392;Dbxref=NCBI_GP:EFB91916.1;Name=EFB91916.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1392;product=FCD domain protein;protein_id=EFB91916.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 42778 43482 . + . ID=gene-HMPREF7215_1393;Name=HMPREF7215_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1393 GCA_000177335.1|ADFP01000011.1 Genbank CDS 42778 43482 . + 0 ID=cds-EFB91917.1;Parent=gene-HMPREF7215_1393;Dbxref=NCBI_GP:EFB91917.1;Name=EFB91917.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1393;product=transcriptional regulator%2C GntR family;protein_id=EFB91917.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 43544 43858 . + . ID=gene-HMPREF7215_1394;Name=HMPREF7215_1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1394 GCA_000177335.1|ADFP01000011.1 Genbank CDS 43544 43858 . + 0 ID=cds-EFB91918.1;Parent=gene-HMPREF7215_1394;Dbxref=NCBI_GP:EFB91918.1;Name=EFB91918.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1394;product=hypothetical protein;protein_id=EFB91918.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 43999 44880 . + . ID=gene-HMPREF7215_1395;Name=HMPREF7215_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1395 GCA_000177335.1|ADFP01000011.1 Genbank CDS 43999 44880 . + 0 ID=cds-EFB91919.1;Parent=gene-HMPREF7215_1395;Dbxref=NCBI_GP:EFB91919.1;Name=EFB91919.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;locus_tag=HMPREF7215_1395;product=hydrolase%2C alpha/beta domain protein;protein_id=EFB91919.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 45025 45645 . + . ID=gene-HMPREF7215_1396;Name=HMPREF7215_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1396 GCA_000177335.1|ADFP01000011.1 Genbank CDS 45025 45645 . + 0 ID=cds-EFB91920.1;Parent=gene-HMPREF7215_1396;Dbxref=NCBI_GP:EFB91920.1;Name=EFB91920.1;Note=identified by match to protein family HMM PF01323;gbkey=CDS;locus_tag=HMPREF7215_1396;product=DsbA-like protein;protein_id=EFB91920.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 45783 46658 . + . ID=gene-HMPREF7215_1397;Name=HMPREF7215_1397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1397 GCA_000177335.1|ADFP01000011.1 Genbank CDS 45783 46658 . + 0 ID=cds-EFB91921.1;Parent=gene-HMPREF7215_1397;Dbxref=NCBI_GP:EFB91921.1;Name=EFB91921.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;locus_tag=HMPREF7215_1397;product=cupin domain protein;protein_id=EFB91921.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 46734 47861 . - . ID=gene-HMPREF7215_1398;Name=HMPREF7215_1398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1398 GCA_000177335.1|ADFP01000011.1 Genbank CDS 46734 47861 . - 0 ID=cds-EFB91922.1;Parent=gene-HMPREF7215_1398;Dbxref=NCBI_GP:EFB91922.1;Name=EFB91922.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1398;product=hypothetical protein;protein_id=EFB91922.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 48107 48691 . - . ID=gene-HMPREF7215_1399;Name=HMPREF7215_1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1399 GCA_000177335.1|ADFP01000011.1 Genbank CDS 48107 48691 . - 0 ID=cds-EFB91923.1;Parent=gene-HMPREF7215_1399;Dbxref=NCBI_GP:EFB91923.1;Name=EFB91923.1;gbkey=CDS;locus_tag=HMPREF7215_1399;product=hypothetical protein;protein_id=EFB91923.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 48799 49308 . - . ID=gene-HMPREF7215_1400;Name=HMPREF7215_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1400 GCA_000177335.1|ADFP01000011.1 Genbank CDS 48799 49308 . - 0 ID=cds-EFB91924.1;Parent=gene-HMPREF7215_1400;Dbxref=NCBI_GP:EFB91924.1;Name=EFB91924.1;gbkey=CDS;locus_tag=HMPREF7215_1400;product=hypothetical protein;protein_id=EFB91924.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 49320 50150 . - . ID=gene-HMPREF7215_1401;Name=HMPREF7215_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1401 GCA_000177335.1|ADFP01000011.1 Genbank CDS 49320 50150 . - 0 ID=cds-EFB91925.1;Parent=gene-HMPREF7215_1401;Dbxref=NCBI_GP:EFB91925.1;Name=EFB91925.1;Note=identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=HMPREF7215_1401;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFB91925.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 50180 50695 . - . ID=gene-HMPREF7215_1402;Name=HMPREF7215_1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1402 GCA_000177335.1|ADFP01000011.1 Genbank CDS 50180 50695 . - 0 ID=cds-EFB91926.1;Parent=gene-HMPREF7215_1402;Dbxref=NCBI_GP:EFB91926.1;Name=EFB91926.1;gbkey=CDS;locus_tag=HMPREF7215_1402;product=hypothetical protein;protein_id=EFB91926.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 50946 51953 . + . ID=gene-HMPREF7215_1403;Name=HMPREF7215_1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1403 GCA_000177335.1|ADFP01000011.1 Genbank CDS 50946 51953 . + 0 ID=cds-EFB91927.1;Parent=gene-HMPREF7215_1403;Dbxref=NCBI_GP:EFB91927.1;Name=EFB91927.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=HMPREF7215_1403;product=ABC transporter%2C solute-binding protein;protein_id=EFB91927.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 52099 54345 . - . ID=gene-HMPREF7215_1404;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=HMPREF7215_1404 GCA_000177335.1|ADFP01000011.1 Genbank CDS 52099 54345 . - 0 ID=cds-EFB91928.1;Parent=gene-HMPREF7215_1404;Dbxref=NCBI_GP:EFB91928.1;Name=EFB91928.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=HMPREF7215_1404;product=formate C-acetyltransferase;protein_id=EFB91928.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 54397 55257 . - . ID=gene-HMPREF7215_1405;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1405 GCA_000177335.1|ADFP01000011.1 Genbank CDS 54397 55257 . - 0 ID=cds-EFB91929.1;Parent=gene-HMPREF7215_1405;Dbxref=NCBI_GP:EFB91929.1;Name=EFB91929.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF7215_1405;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EFB91929.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 55208 55375 . + . ID=gene-HMPREF7215_1406;Name=HMPREF7215_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1406 GCA_000177335.1|ADFP01000011.1 Genbank CDS 55208 55375 . + 0 ID=cds-EFB91930.1;Parent=gene-HMPREF7215_1406;Dbxref=NCBI_GP:EFB91930.1;Name=EFB91930.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1406;product=hypothetical protein;protein_id=EFB91930.1;transl_table=11 GCA_000177335.1|ADFP01000011.1 Genbank gene 55382 56086 . - . ID=gene-HMPREF7215_1407;Name=HMPREF7215_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1407 GCA_000177335.1|ADFP01000011.1 Genbank CDS 55382 56086 . - 0 ID=cds-EFB91931.1;Parent=gene-HMPREF7215_1407;Dbxref=NCBI_GP:EFB91931.1;Name=EFB91931.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00027%3B match to protein family HMM PF00325;gbkey=CDS;locus_tag=HMPREF7215_1407;product=cyclic nucleotide-binding domain protein;protein_id=EFB91931.1;transl_table=11 ##sequence-region ADFP01000010.1 1 18564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000010.1 Genbank region 1 18564 . + . ID=ADFP01000010.1:1..18564;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000010.1 Genbank gene 1 355 . + . ID=gene-HMPREF7215_1067;Name=HMPREF7215_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1067;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000010.1 Genbank CDS 1 355 . + 1 ID=cds-EFB91932.1;Parent=gene-HMPREF7215_1067;Dbxref=NCBI_GP:EFB91932.1;Name=EFB91932.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_1067;partial=true;product=hypothetical protein;protein_id=EFB91932.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 561 1802 . - . ID=gene-HMPREF7215_1068;Name=HMPREF7215_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1068 GCA_000177335.1|ADFP01000010.1 Genbank CDS 561 1802 . - 0 ID=cds-EFB91933.1;Parent=gene-HMPREF7215_1068;Dbxref=NCBI_GP:EFB91933.1;Name=EFB91933.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=HMPREF7215_1068;product=transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein;protein_id=EFB91933.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 1827 2987 . - . ID=gene-HMPREF7215_1069;Name=HMPREF7215_1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1069 GCA_000177335.1|ADFP01000010.1 Genbank CDS 1827 2987 . - 0 ID=cds-EFB91934.1;Parent=gene-HMPREF7215_1069;Dbxref=NCBI_GP:EFB91934.1;Name=EFB91934.1;Note=identified by match to protein family HMM PF04295;gbkey=CDS;locus_tag=HMPREF7215_1069;product=D-galactarate dehydratase/altronate hydrolase domain protein;protein_id=EFB91934.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 3001 3297 . - . ID=gene-HMPREF7215_1070;Name=HMPREF7215_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1070 GCA_000177335.1|ADFP01000010.1 Genbank CDS 3001 3297 . - 0 ID=cds-EFB91935.1;Parent=gene-HMPREF7215_1070;Dbxref=NCBI_GP:EFB91935.1;Name=EFB91935.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF08666;gbkey=CDS;locus_tag=HMPREF7215_1070;product=SAF domain protein;protein_id=EFB91935.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 3407 4360 . + . ID=gene-HMPREF7215_1071;Name=HMPREF7215_1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1071 GCA_000177335.1|ADFP01000010.1 Genbank CDS 3407 4360 . + 0 ID=cds-EFB91936.1;Parent=gene-HMPREF7215_1071;Dbxref=NCBI_GP:EFB91936.1;Name=EFB91936.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_1071;product=LysR substrate binding domain protein;protein_id=EFB91936.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 4691 5431 . + . ID=gene-HMPREF7215_1072;Name=HMPREF7215_1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1072 GCA_000177335.1|ADFP01000010.1 Genbank CDS 4691 5431 . + 0 ID=cds-EFB91937.1;Parent=gene-HMPREF7215_1072;Dbxref=NCBI_GP:EFB91937.1;Name=EFB91937.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_1072;product=putative FeS assembly ATPase SufC;protein_id=EFB91937.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 5434 6360 . + . ID=gene-HMPREF7215_1073;Name=HMPREF7215_1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1073 GCA_000177335.1|ADFP01000010.1 Genbank CDS 5434 6360 . + 0 ID=cds-EFB91938.1;Parent=gene-HMPREF7215_1073;Dbxref=NCBI_GP:EFB91938.1;Name=EFB91938.1;Note=identified by match to protein family HMM PF01458;gbkey=CDS;locus_tag=HMPREF7215_1073;product=SufB/sufD domain protein;protein_id=EFB91938.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank sequence_feature 6441 6547 . + . ID=id-ADFP01000010.1:6441..6547;Note=yybP-ykoY leader;gbkey=misc_feature GCA_000177335.1|ADFP01000010.1 Genbank gene 6602 7240 . + . ID=gene-HMPREF7215_1075;Name=HMPREF7215_1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1075 GCA_000177335.1|ADFP01000010.1 Genbank CDS 6602 7240 . + 0 ID=cds-EFB91939.1;Parent=gene-HMPREF7215_1075;Dbxref=NCBI_GP:EFB91939.1;Name=EFB91939.1;Note=identified by match to protein family HMM PF02659;gbkey=CDS;locus_tag=HMPREF7215_1075;product=hypothetical protein;protein_id=EFB91939.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 7312 8475 . - . ID=gene-HMPREF7215_1076;Name=HMPREF7215_1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1076 GCA_000177335.1|ADFP01000010.1 Genbank CDS 7312 8475 . - 0 ID=cds-EFB91940.1;Parent=gene-HMPREF7215_1076;Dbxref=NCBI_GP:EFB91940.1;Name=EFB91940.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF7215_1076;product=amidohydrolase family protein;protein_id=EFB91940.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 8515 8769 . - . ID=gene-HMPREF7215_1077;Name=HMPREF7215_1077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1077 GCA_000177335.1|ADFP01000010.1 Genbank CDS 8515 8769 . - 0 ID=cds-EFB91941.1;Parent=gene-HMPREF7215_1077;Dbxref=NCBI_GP:EFB91941.1;Name=EFB91941.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1077;product=hypothetical protein;protein_id=EFB91941.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 8929 9840 . + . ID=gene-HMPREF7215_1078;Name=HMPREF7215_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1078 GCA_000177335.1|ADFP01000010.1 Genbank CDS 8929 9840 . + 0 ID=cds-EFB91942.1;Parent=gene-HMPREF7215_1078;Dbxref=NCBI_GP:EFB91942.1;Name=EFB91942.1;Note=identified by match to protein family HMM PF00639;gbkey=CDS;locus_tag=HMPREF7215_1078;product=putative peptidyl-prolyl cis-trans isomerase%2C EpsD family;protein_id=EFB91942.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 9999 11207 . + . ID=gene-HMPREF7215_1079;Name=HMPREF7215_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1079 GCA_000177335.1|ADFP01000010.1 Genbank CDS 9999 11207 . + 0 ID=cds-EFB91943.1;Parent=gene-HMPREF7215_1079;Dbxref=NCBI_GP:EFB91943.1;Name=EFB91943.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF7215_1079;product=aminotransferase%2C class I/II;protein_id=EFB91943.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 11350 12591 . + . ID=gene-HMPREF7215_1080;Name=HMPREF7215_1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1080 GCA_000177335.1|ADFP01000010.1 Genbank CDS 11350 12591 . + 0 ID=cds-EFB91944.1;Parent=gene-HMPREF7215_1080;Dbxref=NCBI_GP:EFB91944.1;Name=EFB91944.1;gbkey=CDS;locus_tag=HMPREF7215_1080;product=hypothetical protein;protein_id=EFB91944.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 12794 13534 . + . ID=gene-HMPREF7215_1081;Name=HMPREF7215_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1081 GCA_000177335.1|ADFP01000010.1 Genbank CDS 12794 13534 . + 0 ID=cds-EFB91945.1;Parent=gene-HMPREF7215_1081;Dbxref=NCBI_GP:EFB91945.1;Name=EFB91945.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF7215_1081;product=FCD domain protein;protein_id=EFB91945.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 13595 13708 . - . ID=gene-HMPREF7215_1082;Name=HMPREF7215_1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1082 GCA_000177335.1|ADFP01000010.1 Genbank CDS 13595 13708 . - 0 ID=cds-EFB91946.1;Parent=gene-HMPREF7215_1082;Dbxref=NCBI_GP:EFB91946.1;Name=EFB91946.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1082;product=hypothetical protein;protein_id=EFB91946.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 13823 14797 . + . ID=gene-HMPREF7215_1083;Name=HMPREF7215_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1083 GCA_000177335.1|ADFP01000010.1 Genbank CDS 13823 14797 . + 0 ID=cds-EFB91947.1;Parent=gene-HMPREF7215_1083;Dbxref=NCBI_GP:EFB91947.1;Name=EFB91947.1;Note=identified by match to protein family HMM PF03401;gbkey=CDS;locus_tag=HMPREF7215_1083;product=hypothetical protein;protein_id=EFB91947.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 14907 15353 . + . ID=gene-HMPREF7215_1084;Name=HMPREF7215_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1084 GCA_000177335.1|ADFP01000010.1 Genbank CDS 14907 15353 . + 0 ID=cds-EFB91948.1;Parent=gene-HMPREF7215_1084;Dbxref=NCBI_GP:EFB91948.1;Name=EFB91948.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1084;product=hypothetical protein;protein_id=EFB91948.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 15374 15856 . + . ID=gene-HMPREF7215_1085;Name=HMPREF7215_1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1085 GCA_000177335.1|ADFP01000010.1 Genbank CDS 15374 15856 . + 0 ID=cds-EFB91949.1;Parent=gene-HMPREF7215_1085;Dbxref=NCBI_GP:EFB91949.1;Name=EFB91949.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF7215_1085;product=hypothetical protein;protein_id=EFB91949.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 15896 16885 . + . ID=gene-HMPREF7215_1087;Name=HMPREF7215_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1087 GCA_000177335.1|ADFP01000010.1 Genbank CDS 15896 16885 . + 0 ID=cds-EFB91950.1;Parent=gene-HMPREF7215_1087;Dbxref=NCBI_GP:EFB91950.1;Name=EFB91950.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01970;gbkey=CDS;locus_tag=HMPREF7215_1087;product=membrane protein;protein_id=EFB91950.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 16864 17028 . - . ID=gene-HMPREF7215_1086;Name=HMPREF7215_1086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1086 GCA_000177335.1|ADFP01000010.1 Genbank CDS 16864 17028 . - 0 ID=cds-EFB91951.1;Parent=gene-HMPREF7215_1086;Dbxref=NCBI_GP:EFB91951.1;Name=EFB91951.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1086;product=hypothetical protein;protein_id=EFB91951.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 16991 17260 . + . ID=gene-HMPREF7215_1088;Name=HMPREF7215_1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1088 GCA_000177335.1|ADFP01000010.1 Genbank CDS 16991 17260 . + 0 ID=cds-EFB91952.1;Parent=gene-HMPREF7215_1088;Dbxref=NCBI_GP:EFB91952.1;Name=EFB91952.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_1088;product=hypothetical protein;protein_id=EFB91952.1;transl_table=11 GCA_000177335.1|ADFP01000010.1 Genbank gene 17272 18498 . + . ID=gene-HMPREF7215_1089;Name=HMPREF7215_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1089 GCA_000177335.1|ADFP01000010.1 Genbank CDS 17272 18498 . + 0 ID=cds-EFB91953.1;Parent=gene-HMPREF7215_1089;Dbxref=NCBI_GP:EFB91953.1;Name=EFB91953.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04295;gbkey=CDS;locus_tag=HMPREF7215_1089;product=D-galactarate dehydratase/altronate hydrolase domain protein;protein_id=EFB91953.1;transl_table=11 ##sequence-region ADFP01000009.1 1 39826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000009.1 Genbank region 1 39826 . + . ID=ADFP01000009.1:1..39826;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000009.1 Genbank gene 410 1774 . - . ID=gene-HMPREF7215_0411;Name=HMPREF7215_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0411 GCA_000177335.1|ADFP01000009.1 Genbank CDS 410 1774 . - 0 ID=cds-EFB91954.1;Parent=gene-HMPREF7215_0411;Dbxref=NCBI_GP:EFB91954.1;Name=EFB91954.1;Note=identified by match to protein family HMM PF00654;gbkey=CDS;locus_tag=HMPREF7215_0411;product=chloride transporter%2C ClC family;protein_id=EFB91954.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 1793 2230 . - . ID=gene-HMPREF7215_0412;Name=HMPREF7215_0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0412 GCA_000177335.1|ADFP01000009.1 Genbank CDS 1793 2230 . - 0 ID=cds-EFB91955.1;Parent=gene-HMPREF7215_0412;Dbxref=NCBI_GP:EFB91955.1;Name=EFB91955.1;gbkey=CDS;locus_tag=HMPREF7215_0412;product=hypothetical protein;protein_id=EFB91955.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 2232 3110 . - . ID=gene-HMPREF7215_0413;Name=HMPREF7215_0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0413 GCA_000177335.1|ADFP01000009.1 Genbank CDS 2232 3110 . - 0 ID=cds-EFB91956.1;Parent=gene-HMPREF7215_0413;Dbxref=NCBI_GP:EFB91956.1;Name=EFB91956.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF7215_0413;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EFB91956.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 3214 3963 . - . ID=gene-HMPREF7215_0414;Name=HMPREF7215_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0414 GCA_000177335.1|ADFP01000009.1 Genbank CDS 3214 3963 . - 0 ID=cds-EFB91957.1;Parent=gene-HMPREF7215_0414;Dbxref=NCBI_GP:EFB91957.1;Name=EFB91957.1;Note=identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258;gbkey=CDS;locus_tag=HMPREF7215_0414;product=phosphoglycerate mutase 1 family;protein_id=EFB91957.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 3982 4113 . + . ID=gene-HMPREF7215_0415;Name=HMPREF7215_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0415 GCA_000177335.1|ADFP01000009.1 Genbank CDS 3982 4113 . + 0 ID=cds-EFB91958.1;Parent=gene-HMPREF7215_0415;Dbxref=NCBI_GP:EFB91958.1;Name=EFB91958.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0415;product=hypothetical protein;protein_id=EFB91958.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 4129 4749 . - . ID=gene-HMPREF7215_0416;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=HMPREF7215_0416 GCA_000177335.1|ADFP01000009.1 Genbank CDS 4129 4749 . - 0 ID=cds-EFB91959.1;Parent=gene-HMPREF7215_0416;Dbxref=NCBI_GP:EFB91959.1;Name=EFB91959.1;Note=identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;locus_tag=HMPREF7215_0416;product=ribosomal protein S4;protein_id=EFB91959.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 4915 5301 . - . ID=gene-HMPREF7215_0417;Name=HMPREF7215_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0417 GCA_000177335.1|ADFP01000009.1 Genbank CDS 4915 5301 . - 0 ID=cds-EFB91960.1;Parent=gene-HMPREF7215_0417;Dbxref=NCBI_GP:EFB91960.1;Name=EFB91960.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0417;product=hypothetical protein;protein_id=EFB91960.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 5298 6410 . - . ID=gene-HMPREF7215_0418;Name=HMPREF7215_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0418 GCA_000177335.1|ADFP01000009.1 Genbank CDS 5298 6410 . - 0 ID=cds-EFB91961.1;Parent=gene-HMPREF7215_0418;Dbxref=NCBI_GP:EFB91961.1;Name=EFB91961.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_0418;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91961.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 6410 7453 . - . ID=gene-HMPREF7215_0419;Name=HMPREF7215_0419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0419 GCA_000177335.1|ADFP01000009.1 Genbank CDS 6410 7453 . - 0 ID=cds-EFB91962.1;Parent=gene-HMPREF7215_0419;Dbxref=NCBI_GP:EFB91962.1;Name=EFB91962.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=HMPREF7215_0419;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=EFB91962.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 7450 9048 . - . ID=gene-HMPREF7215_0420;Name=HMPREF7215_0420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0420 GCA_000177335.1|ADFP01000009.1 Genbank CDS 7450 9048 . - 0 ID=cds-EFB91963.1;Parent=gene-HMPREF7215_0420;Dbxref=NCBI_GP:EFB91963.1;Name=EFB91963.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0420;product=ABC transporter%2C ATP-binding protein;protein_id=EFB91963.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 9047 9274 . + . ID=gene-HMPREF7215_0421;Name=HMPREF7215_0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0421 GCA_000177335.1|ADFP01000009.1 Genbank CDS 9047 9274 . + 0 ID=cds-EFB91964.1;Parent=gene-HMPREF7215_0421;Dbxref=NCBI_GP:EFB91964.1;Name=EFB91964.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0421;product=hypothetical protein;protein_id=EFB91964.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 9286 10497 . - . ID=gene-HMPREF7215_0422;Name=HMPREF7215_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0422 GCA_000177335.1|ADFP01000009.1 Genbank CDS 9286 10497 . - 0 ID=cds-EFB91965.1;Parent=gene-HMPREF7215_0422;Dbxref=NCBI_GP:EFB91965.1;Name=EFB91965.1;gbkey=CDS;locus_tag=HMPREF7215_0422;product=hypothetical protein;protein_id=EFB91965.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 10932 12146 . - . ID=gene-HMPREF7215_0423;Name=HMPREF7215_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0423 GCA_000177335.1|ADFP01000009.1 Genbank CDS 10932 12146 . - 0 ID=cds-EFB91966.1;Parent=gene-HMPREF7215_0423;Dbxref=NCBI_GP:EFB91966.1;Name=EFB91966.1;gbkey=CDS;locus_tag=HMPREF7215_0423;product=hypothetical protein;protein_id=EFB91966.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 12419 12694 . - . ID=gene-HMPREF7215_0424;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;locus_tag=HMPREF7215_0424 GCA_000177335.1|ADFP01000009.1 Genbank CDS 12419 12694 . - 0 ID=cds-EFB91967.1;Parent=gene-HMPREF7215_0424;Dbxref=NCBI_GP:EFB91967.1;Name=EFB91967.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;gene=hup;locus_tag=HMPREF7215_0424;product=DNA-binding protein HU;protein_id=EFB91967.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 12793 14124 . - . ID=gene-HMPREF7215_0425;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=HMPREF7215_0425 GCA_000177335.1|ADFP01000009.1 Genbank CDS 12793 14124 . - 0 ID=cds-EFB91968.1;Parent=gene-HMPREF7215_0425;Dbxref=NCBI_GP:EFB91968.1;Name=EFB91968.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594;gbkey=CDS;gene=der;locus_tag=HMPREF7215_0425;product=ribosome biogenesis GTPase Der;protein_id=EFB91968.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 14157 15944 . - . ID=gene-HMPREF7215_0426;Name=HMPREF7215_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0426 GCA_000177335.1|ADFP01000009.1 Genbank CDS 14157 15944 . - 0 ID=cds-EFB91969.1;Parent=gene-HMPREF7215_0426;Dbxref=NCBI_GP:EFB91969.1;Name=EFB91969.1;gbkey=CDS;locus_tag=HMPREF7215_0426;product=putative primosomal protein N';protein_id=EFB91969.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 15966 16298 . - . ID=gene-HMPREF7215_0427;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=HMPREF7215_0427 GCA_000177335.1|ADFP01000009.1 Genbank CDS 15966 16298 . - 0 ID=cds-EFB91970.1;Parent=gene-HMPREF7215_0427;Dbxref=NCBI_GP:EFB91970.1;Name=EFB91970.1;Note=identified by match to protein family HMM TIGR00690;gbkey=CDS;gene=rpoZ;locus_tag=HMPREF7215_0427;product=DNA-directed RNA polymerase%2C omega subunit;protein_id=EFB91970.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 16310 16885 . - . ID=gene-HMPREF7215_0428;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=HMPREF7215_0428 GCA_000177335.1|ADFP01000009.1 Genbank CDS 16310 16885 . - 0 ID=cds-EFB91971.1;Parent=gene-HMPREF7215_0428;Dbxref=NCBI_GP:EFB91971.1;Name=EFB91971.1;Note=identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263;gbkey=CDS;gene=gmk;locus_tag=HMPREF7215_0428;product=guanylate kinase;protein_id=EFB91971.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 16872 17135 . - . ID=gene-HMPREF7215_0429;Name=HMPREF7215_0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0429 GCA_000177335.1|ADFP01000009.1 Genbank CDS 16872 17135 . - 0 ID=cds-EFB91972.1;Parent=gene-HMPREF7215_0429;Dbxref=NCBI_GP:EFB91972.1;Name=EFB91972.1;Note=identified by match to protein family HMM PF04025;gbkey=CDS;locus_tag=HMPREF7215_0429;product=hypothetical protein;protein_id=EFB91972.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 17139 18020 . - . ID=gene-HMPREF7215_0430;Name=HMPREF7215_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0430 GCA_000177335.1|ADFP01000009.1 Genbank CDS 17139 18020 . - 0 ID=cds-EFB91973.1;Parent=gene-HMPREF7215_0430;Dbxref=NCBI_GP:EFB91973.1;Name=EFB91973.1;Note=identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255;gbkey=CDS;locus_tag=HMPREF7215_0430;product=TIGR00255-like family protein;protein_id=EFB91973.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 18037 19113 . - . ID=gene-HMPREF7215_0431;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0431 GCA_000177335.1|ADFP01000009.1 Genbank CDS 18037 19113 . - 0 ID=cds-EFB91974.1;Parent=gene-HMPREF7215_0431;Dbxref=NCBI_GP:EFB91974.1;Name=EFB91974.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03156;gbkey=CDS;gene=hflX;locus_tag=HMPREF7215_0431;product=GTP-binding protein HflX;protein_id=EFB91974.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 19164 19802 . - . ID=gene-HMPREF7215_0432;Name=HMPREF7215_0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0432 GCA_000177335.1|ADFP01000009.1 Genbank CDS 19164 19802 . - 0 ID=cds-EFB91975.1;Parent=gene-HMPREF7215_0432;Dbxref=NCBI_GP:EFB91975.1;Name=EFB91975.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;locus_tag=HMPREF7215_0432;product=Acyltransferase;protein_id=EFB91975.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 19795 20460 . - . ID=gene-HMPREF7215_0433;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=HMPREF7215_0433 GCA_000177335.1|ADFP01000009.1 Genbank CDS 19795 20460 . - 0 ID=cds-EFB91976.1;Parent=gene-HMPREF7215_0433;Dbxref=NCBI_GP:EFB91976.1;Name=EFB91976.1;Note=identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017;gbkey=CDS;gene=cmk;locus_tag=HMPREF7215_0433;product=cytidylate kinase;protein_id=EFB91976.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 20486 21202 . - . ID=gene-HMPREF7215_0434;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0434 GCA_000177335.1|ADFP01000009.1 Genbank CDS 20486 21202 . - 0 ID=cds-EFB91977.1;Parent=gene-HMPREF7215_0434;Dbxref=NCBI_GP:EFB91977.1;Name=EFB91977.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479;gbkey=CDS;gene=rluB;locus_tag=HMPREF7215_0434;product=pseudouridylate synthase;protein_id=EFB91977.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 21189 21830 . - . ID=gene-HMPREF7215_0435;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0435 GCA_000177335.1|ADFP01000009.1 Genbank CDS 21189 21830 . - 0 ID=cds-EFB91978.1;Parent=gene-HMPREF7215_0435;Dbxref=NCBI_GP:EFB91978.1;Name=EFB91978.1;Note=identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;locus_tag=HMPREF7215_0435;product=segregation and condensation protein B;protein_id=EFB91978.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 21796 22539 . - . ID=gene-HMPREF7215_0436;Name=HMPREF7215_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0436 GCA_000177335.1|ADFP01000009.1 Genbank CDS 21796 22539 . - 0 ID=cds-EFB91979.1;Parent=gene-HMPREF7215_0436;Dbxref=NCBI_GP:EFB91979.1;Name=EFB91979.1;Note=identified by match to protein family HMM PF02616;gbkey=CDS;locus_tag=HMPREF7215_0436;product=ScpA/B protein;protein_id=EFB91979.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 22526 23344 . - . ID=gene-HMPREF7215_0437;Name=HMPREF7215_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0437 GCA_000177335.1|ADFP01000009.1 Genbank CDS 22526 23344 . - 0 ID=cds-EFB91980.1;Parent=gene-HMPREF7215_0437;Dbxref=NCBI_GP:EFB91980.1;Name=EFB91980.1;Note=identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;locus_tag=HMPREF7215_0437;product=dinuclear metal center protein%2C YbgI family;protein_id=EFB91980.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 23615 24625 . - . ID=gene-HMPREF7215_0438;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=HMPREF7215_0438 GCA_000177335.1|ADFP01000009.1 Genbank CDS 23615 24625 . - 0 ID=cds-EFB91981.1;Parent=gene-HMPREF7215_0438;Dbxref=NCBI_GP:EFB91981.1;Name=EFB91981.1;Note=identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330;gbkey=CDS;gene=glpX;locus_tag=HMPREF7215_0438;product=fructose-1%2C6-bisphosphatase%2C class II;protein_id=EFB91981.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 24656 25948 . - . ID=gene-HMPREF7215_0439;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0439 GCA_000177335.1|ADFP01000009.1 Genbank CDS 24656 25948 . - 0 ID=cds-EFB91982.1;Parent=gene-HMPREF7215_0439;Dbxref=NCBI_GP:EFB91982.1;Name=EFB91982.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928;gbkey=CDS;gene=purB;locus_tag=HMPREF7215_0439;product=adenylosuccinate lyase;protein_id=EFB91982.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 25970 26899 . - . ID=gene-HMPREF7215_0440;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0440 GCA_000177335.1|ADFP01000009.1 Genbank CDS 25970 26899 . - 0 ID=cds-EFB91983.1;Parent=gene-HMPREF7215_0440;Dbxref=NCBI_GP:EFB91983.1;Name=EFB91983.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR00064;gbkey=CDS;gene=ftsY;locus_tag=HMPREF7215_0440;product=signal recognition particle-docking protein FtsY;protein_id=EFB91983.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 26903 28123 . - . ID=gene-HMPREF7215_0441;Name=HMPREF7215_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0441 GCA_000177335.1|ADFP01000009.1 Genbank CDS 26903 28123 . - 0 ID=cds-EFB91984.1;Parent=gene-HMPREF7215_0441;Dbxref=NCBI_GP:EFB91984.1;Name=EFB91984.1;Note=identified by match to protein family HMM PF04468;gbkey=CDS;locus_tag=HMPREF7215_0441;product=PSP1 C-terminal domain protein;protein_id=EFB91984.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 28308 29111 . - . ID=gene-HMPREF7215_0442;Name=HMPREF7215_0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0442 GCA_000177335.1|ADFP01000009.1 Genbank CDS 28308 29111 . - 0 ID=cds-EFB91985.1;Parent=gene-HMPREF7215_0442;Dbxref=NCBI_GP:EFB91985.1;Name=EFB91985.1;gbkey=CDS;locus_tag=HMPREF7215_0442;product=putative DNA polymerase III%2C delta' subunit;protein_id=EFB91985.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 29108 29713 . - . ID=gene-HMPREF7215_0443;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HMPREF7215_0443 GCA_000177335.1|ADFP01000009.1 Genbank CDS 29108 29713 . - 0 ID=cds-EFB91986.1;Parent=gene-HMPREF7215_0443;Dbxref=NCBI_GP:EFB91986.1;Name=EFB91986.1;Note=identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041;gbkey=CDS;gene=tmk;locus_tag=HMPREF7215_0443;product=dTMP kinase;protein_id=EFB91986.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 29826 31043 . + . ID=gene-HMPREF7215_0444;Name=HMPREF7215_0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0444 GCA_000177335.1|ADFP01000009.1 Genbank CDS 29826 31043 . + 0 ID=cds-EFB91987.1;Parent=gene-HMPREF7215_0444;Dbxref=NCBI_GP:EFB91987.1;Name=EFB91987.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF7215_0444;product=amidohydrolase;protein_id=EFB91987.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 31040 32326 . + . ID=gene-HMPREF7215_0445;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0445 GCA_000177335.1|ADFP01000009.1 Genbank CDS 31040 32326 . + 0 ID=cds-EFB91988.1;Parent=gene-HMPREF7215_0445;Dbxref=NCBI_GP:EFB91988.1;Name=EFB91988.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;gene=abgA;locus_tag=HMPREF7215_0445;product=aminobenzoyl-glutamate utilization protein A;protein_id=EFB91988.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 32383 32769 . - . ID=gene-HMPREF7215_0446;Name=HMPREF7215_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0446 GCA_000177335.1|ADFP01000009.1 Genbank CDS 32383 32769 . - 0 ID=cds-EFB91989.1;Parent=gene-HMPREF7215_0446;Dbxref=NCBI_GP:EFB91989.1;Name=EFB91989.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF7215_0446;product=mutator mutT protein;protein_id=EFB91989.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 32794 32973 . + . ID=gene-HMPREF7215_0447;Name=HMPREF7215_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0447 GCA_000177335.1|ADFP01000009.1 Genbank CDS 32794 32973 . + 0 ID=cds-EFB91990.1;Parent=gene-HMPREF7215_0447;Dbxref=NCBI_GP:EFB91990.1;Name=EFB91990.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0447;product=hypothetical protein;protein_id=EFB91990.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 32987 33478 . + . ID=gene-HMPREF7215_0448;Name=HMPREF7215_0448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0448 GCA_000177335.1|ADFP01000009.1 Genbank CDS 32987 33478 . + 0 ID=cds-EFB91991.1;Parent=gene-HMPREF7215_0448;Dbxref=NCBI_GP:EFB91991.1;Name=EFB91991.1;Note=identified by match to protein family HMM PF02810;gbkey=CDS;locus_tag=HMPREF7215_0448;product=hypothetical protein;protein_id=EFB91991.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 33487 35004 . + . ID=gene-HMPREF7215_0449;Name=HMPREF7215_0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0449 GCA_000177335.1|ADFP01000009.1 Genbank CDS 33487 35004 . + 0 ID=cds-EFB91992.1;Parent=gene-HMPREF7215_0449;Dbxref=NCBI_GP:EFB91992.1;Name=EFB91992.1;Note=identified by match to protein family HMM PF08903;gbkey=CDS;locus_tag=HMPREF7215_0449;product=hypothetical protein;protein_id=EFB91992.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 35075 35197 . - . ID=gene-HMPREF7215_0450;Name=HMPREF7215_0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0450 GCA_000177335.1|ADFP01000009.1 Genbank CDS 35075 35197 . - 0 ID=cds-EFB91993.1;Parent=gene-HMPREF7215_0450;Dbxref=NCBI_GP:EFB91993.1;Name=EFB91993.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0450;product=hypothetical protein;protein_id=EFB91993.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 35319 35675 . + . ID=gene-HMPREF7215_0451;Name=HMPREF7215_0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0451 GCA_000177335.1|ADFP01000009.1 Genbank CDS 35319 35675 . + 0 ID=cds-EFB91994.1;Parent=gene-HMPREF7215_0451;Dbxref=NCBI_GP:EFB91994.1;Name=EFB91994.1;gbkey=CDS;locus_tag=HMPREF7215_0451;product=hypothetical protein;protein_id=EFB91994.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 35693 35863 . + . ID=gene-HMPREF7215_0452;Name=HMPREF7215_0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0452 GCA_000177335.1|ADFP01000009.1 Genbank CDS 35693 35863 . + 0 ID=cds-EFB91995.1;Parent=gene-HMPREF7215_0452;Dbxref=NCBI_GP:EFB91995.1;Name=EFB91995.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0452;product=hypothetical protein;protein_id=EFB91995.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 35930 37891 . + . ID=gene-HMPREF7215_0453;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0453 GCA_000177335.1|ADFP01000009.1 Genbank CDS 35930 37891 . + 0 ID=cds-EFB91996.1;Parent=gene-HMPREF7215_0453;Dbxref=NCBI_GP:EFB91996.1;Name=EFB91996.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394;gbkey=CDS;gene=typA;locus_tag=HMPREF7215_0453;product=GTP-binding protein TypA;protein_id=EFB91996.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 37910 38914 . + . ID=gene-HMPREF7215_0454;Name=HMPREF7215_0454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0454 GCA_000177335.1|ADFP01000009.1 Genbank CDS 37910 38914 . + 0 ID=cds-EFB91997.1;Parent=gene-HMPREF7215_0454;Dbxref=NCBI_GP:EFB91997.1;Name=EFB91997.1;Note=identified by match to protein family HMM PF01210%3B match to protein family HMM PF07479;gbkey=CDS;locus_tag=HMPREF7215_0454;product=putative glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=EFB91997.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 39010 39180 . + . ID=gene-HMPREF7215_0455;Name=HMPREF7215_0455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0455 GCA_000177335.1|ADFP01000009.1 Genbank CDS 39010 39180 . + 0 ID=cds-EFB91998.1;Parent=gene-HMPREF7215_0455;Dbxref=NCBI_GP:EFB91998.1;Name=EFB91998.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF7215_0455;product=4Fe-4S binding domain protein;protein_id=EFB91998.1;transl_table=11 GCA_000177335.1|ADFP01000009.1 Genbank gene 39328 39717 . - . ID=gene-HMPREF7215_0456;Name=HMPREF7215_0456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0456 GCA_000177335.1|ADFP01000009.1 Genbank CDS 39328 39717 . - 0 ID=cds-EFB91999.1;Parent=gene-HMPREF7215_0456;Dbxref=NCBI_GP:EFB91999.1;Name=EFB91999.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0456;product=hypothetical protein;protein_id=EFB91999.1;transl_table=11 ##sequence-region ADFP01000008.1 1 5386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000008.1 Genbank region 1 5386 . + . ID=ADFP01000008.1:1..5386;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000008.1 Genbank gene 67 142 . + . ID=gene-HMPREF7215_2487;Name=HMPREF7215_2487;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2487 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 67 142 . + . ID=rna-HMPREF7215_2487;Parent=gene-HMPREF7215_2487;gbkey=tRNA;locus_tag=HMPREF7215_2487;product=tRNA-Ala GCA_000177335.1|ADFP01000008.1 Genbank exon 67 142 . + . ID=exon-HMPREF7215_2487-1;Parent=rna-HMPREF7215_2487;gbkey=tRNA;locus_tag=HMPREF7215_2487;product=tRNA-Ala GCA_000177335.1|ADFP01000008.1 Genbank gene 155 234 . + . ID=gene-HMPREF7215_2488;Name=HMPREF7215_2488;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2488 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 155 234 . + . ID=rna-HMPREF7215_2488;Parent=gene-HMPREF7215_2488;gbkey=tRNA;locus_tag=HMPREF7215_2488;product=tRNA-Pro GCA_000177335.1|ADFP01000008.1 Genbank exon 155 234 . + . ID=exon-HMPREF7215_2488-1;Parent=rna-HMPREF7215_2488;gbkey=tRNA;locus_tag=HMPREF7215_2488;product=tRNA-Pro GCA_000177335.1|ADFP01000008.1 Genbank gene 249 324 . + . ID=gene-HMPREF7215_2489;Name=HMPREF7215_2489;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2489 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 249 324 . + . ID=rna-HMPREF7215_2489;Parent=gene-HMPREF7215_2489;gbkey=tRNA;locus_tag=HMPREF7215_2489;product=tRNA-Gly GCA_000177335.1|ADFP01000008.1 Genbank exon 249 324 . + . ID=exon-HMPREF7215_2489-1;Parent=rna-HMPREF7215_2489;gbkey=tRNA;locus_tag=HMPREF7215_2489;product=tRNA-Gly GCA_000177335.1|ADFP01000008.1 Genbank gene 332 410 . + . ID=gene-HMPREF7215_2490;Name=HMPREF7215_2490;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2490 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 332 410 . + . ID=rna-HMPREF7215_2490;Parent=gene-HMPREF7215_2490;gbkey=tRNA;locus_tag=HMPREF7215_2490;product=tRNA-Arg GCA_000177335.1|ADFP01000008.1 Genbank exon 332 410 . + . ID=exon-HMPREF7215_2490-1;Parent=rna-HMPREF7215_2490;gbkey=tRNA;locus_tag=HMPREF7215_2490;product=tRNA-Arg GCA_000177335.1|ADFP01000008.1 Genbank gene 440 518 . + . ID=gene-HMPREF7215_2491;Name=HMPREF7215_2491;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2491 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 440 518 . + . ID=rna-HMPREF7215_2491;Parent=gene-HMPREF7215_2491;gbkey=tRNA;locus_tag=HMPREF7215_2491;product=tRNA-His GCA_000177335.1|ADFP01000008.1 Genbank exon 440 518 . + . ID=exon-HMPREF7215_2491-1;Parent=rna-HMPREF7215_2491;gbkey=tRNA;locus_tag=HMPREF7215_2491;product=tRNA-His GCA_000177335.1|ADFP01000008.1 Genbank gene 527 602 . + . ID=gene-HMPREF7215_2492;Name=HMPREF7215_2492;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2492 GCA_000177335.1|ADFP01000008.1 Genbank tRNA 527 602 . + . ID=rna-HMPREF7215_2492;Parent=gene-HMPREF7215_2492;gbkey=tRNA;locus_tag=HMPREF7215_2492;product=tRNA-Lys GCA_000177335.1|ADFP01000008.1 Genbank exon 527 602 . + . ID=exon-HMPREF7215_2492-1;Parent=rna-HMPREF7215_2492;gbkey=tRNA;locus_tag=HMPREF7215_2492;product=tRNA-Lys GCA_000177335.1|ADFP01000008.1 Genbank gene 1453 1578 . + . ID=gene-HMPREF7215_2493;Name=HMPREF7215_2493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2493 GCA_000177335.1|ADFP01000008.1 Genbank CDS 1453 1578 . + 0 ID=cds-EFB92000.1;Parent=gene-HMPREF7215_2493;Dbxref=NCBI_GP:EFB92000.1;Name=EFB92000.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2493;product=hypothetical protein;protein_id=EFB92000.1;transl_table=11 GCA_000177335.1|ADFP01000008.1 Genbank gene 1871 2128 . + . ID=gene-HMPREF7215_2494;Name=HMPREF7215_2494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2494 GCA_000177335.1|ADFP01000008.1 Genbank CDS 1871 2128 . + 0 ID=cds-EFB92001.1;Parent=gene-HMPREF7215_2494;Dbxref=NCBI_GP:EFB92001.1;Name=EFB92001.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2494;product=hypothetical protein;protein_id=EFB92001.1;transl_table=11 GCA_000177335.1|ADFP01000008.1 Genbank gene 2118 4577 . + . ID=gene-HMPREF7215_2495;Name=HMPREF7215_2495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2495 GCA_000177335.1|ADFP01000008.1 Genbank CDS 2118 4577 . + 0 ID=cds-EFB92002.1;Parent=gene-HMPREF7215_2495;Dbxref=NCBI_GP:EFB92002.1;Name=EFB92002.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07848;gbkey=CDS;locus_tag=HMPREF7215_2495;product=transcriptional regulator%2C GntR family;protein_id=EFB92002.1;transl_table=11 GCA_000177335.1|ADFP01000008.1 Genbank gene 4570 4959 . + . ID=gene-HMPREF7215_2496;Name=HMPREF7215_2496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2496 GCA_000177335.1|ADFP01000008.1 Genbank CDS 4570 4959 . + 0 ID=cds-EFB92003.1;Parent=gene-HMPREF7215_2496;Dbxref=NCBI_GP:EFB92003.1;Name=EFB92003.1;gbkey=CDS;locus_tag=HMPREF7215_2496;product=hypothetical protein;protein_id=EFB92003.1;transl_table=11 ##sequence-region ADFP01000007.1 1 26049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000007.1 Genbank region 1 26049 . + . ID=ADFP01000007.1:1..26049;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000007.1 Genbank gene 79 699 . - . ID=gene-HMPREF7215_0470;Name=HMPREF7215_0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0470 GCA_000177335.1|ADFP01000007.1 Genbank CDS 79 699 . - 0 ID=cds-EFB92004.1;Parent=gene-HMPREF7215_0470;Dbxref=NCBI_GP:EFB92004.1;Name=EFB92004.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0470;product=hypothetical protein;protein_id=EFB92004.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 725 1648 . + . ID=gene-HMPREF7215_0471;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=HMPREF7215_0471 GCA_000177335.1|ADFP01000007.1 Genbank CDS 725 1648 . + 0 ID=cds-EFB92005.1;Parent=gene-HMPREF7215_0471;Dbxref=NCBI_GP:EFB92005.1;Name=EFB92005.1;Note=identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633;gbkey=CDS;gene=xth;locus_tag=HMPREF7215_0471;product=exodeoxyribonuclease III;protein_id=EFB92005.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 1666 3198 . + . ID=gene-HMPREF7215_0472;Name=HMPREF7215_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0472 GCA_000177335.1|ADFP01000007.1 Genbank CDS 1666 3198 . + 0 ID=cds-EFB92006.1;Parent=gene-HMPREF7215_0472;Dbxref=NCBI_GP:EFB92006.1;Name=EFB92006.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;locus_tag=HMPREF7215_0472;product=YbaK/proline--tRNA ligase associated domain protein;protein_id=EFB92006.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 3235 3636 . + . ID=gene-HMPREF7215_0473;Name=HMPREF7215_0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0473 GCA_000177335.1|ADFP01000007.1 Genbank CDS 3235 3636 . + 0 ID=cds-EFB92007.1;Parent=gene-HMPREF7215_0473;Dbxref=NCBI_GP:EFB92007.1;Name=EFB92007.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0473;product=hypothetical protein;protein_id=EFB92007.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 3639 4106 . + . ID=gene-HMPREF7215_0474;Name=HMPREF7215_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0474 GCA_000177335.1|ADFP01000007.1 Genbank CDS 3639 4106 . + 0 ID=cds-EFB92008.1;Parent=gene-HMPREF7215_0474;Dbxref=NCBI_GP:EFB92008.1;Name=EFB92008.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0474;product=hypothetical protein;protein_id=EFB92008.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 4168 5319 . - . ID=gene-HMPREF7215_0475;Name=HMPREF7215_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0475 GCA_000177335.1|ADFP01000007.1 Genbank CDS 4168 5319 . - 0 ID=cds-EFB92009.1;Parent=gene-HMPREF7215_0475;Dbxref=NCBI_GP:EFB92009.1;Name=EFB92009.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0475;product=hypothetical protein;protein_id=EFB92009.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 5500 6861 . - . ID=gene-HMPREF7215_0476;Name=HMPREF7215_0476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0476 GCA_000177335.1|ADFP01000007.1 Genbank CDS 5500 6861 . - 0 ID=cds-EFB92010.1;Parent=gene-HMPREF7215_0476;Dbxref=NCBI_GP:EFB92010.1;Name=EFB92010.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_0476;product=MATE efflux family protein;protein_id=EFB92010.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 6889 8148 . - . ID=gene-HMPREF7215_0477;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0477 GCA_000177335.1|ADFP01000007.1 Genbank CDS 6889 8148 . - 0 ID=cds-EFB92011.1;Parent=gene-HMPREF7215_0477;Dbxref=NCBI_GP:EFB92011.1;Name=EFB92011.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR00407;gbkey=CDS;gene=proA;locus_tag=HMPREF7215_0477;product=glutamate-5-semialdehyde dehydrogenase;protein_id=EFB92011.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 8173 9291 . - . ID=gene-HMPREF7215_0478;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0478 GCA_000177335.1|ADFP01000007.1 Genbank CDS 8173 9291 . - 0 ID=cds-EFB92012.1;Parent=gene-HMPREF7215_0478;Dbxref=NCBI_GP:EFB92012.1;Name=EFB92012.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027;gbkey=CDS;gene=proB;locus_tag=HMPREF7215_0478;product=glutamate 5-kinase;protein_id=EFB92012.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 9515 9823 . + . ID=gene-HMPREF7215_0479;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=HMPREF7215_0479 GCA_000177335.1|ADFP01000007.1 Genbank CDS 9515 9823 . + 0 ID=cds-EFB92013.1;Parent=gene-HMPREF7215_0479;Dbxref=NCBI_GP:EFB92013.1;Name=EFB92013.1;Note=identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068;gbkey=CDS;gene=trxA;locus_tag=HMPREF7215_0479;product=thioredoxin;protein_id=EFB92013.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 9909 10580 . - . ID=gene-HMPREF7215_0480;Name=HMPREF7215_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0480 GCA_000177335.1|ADFP01000007.1 Genbank CDS 9909 10580 . - 0 ID=cds-EFB92014.1;Parent=gene-HMPREF7215_0480;Dbxref=NCBI_GP:EFB92014.1;Name=EFB92014.1;Note=identified by match to protein family HMM PF00027%3B match to protein family HMM PF00325;gbkey=CDS;locus_tag=HMPREF7215_0480;product=cyclic nucleotide-binding domain protein;protein_id=EFB92014.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 10650 12974 . - . ID=gene-HMPREF7215_0481;Name=HMPREF7215_0481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0481 GCA_000177335.1|ADFP01000007.1 Genbank CDS 10650 12974 . - 0 ID=cds-EFB92015.1;Parent=gene-HMPREF7215_0481;Dbxref=NCBI_GP:EFB92015.1;Name=EFB92015.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF7215_0481;product=ATPase family associated with various cellular activities (AAA);protein_id=EFB92015.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 13015 13512 . - . ID=gene-HMPREF7215_0482;Name=HMPREF7215_0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0482 GCA_000177335.1|ADFP01000007.1 Genbank CDS 13015 13512 . - 0 ID=cds-EFB92016.1;Parent=gene-HMPREF7215_0482;Dbxref=NCBI_GP:EFB92016.1;Name=EFB92016.1;Note=identified by match to protein family HMM PF05848;gbkey=CDS;locus_tag=HMPREF7215_0482;product=transcriptional repressor of CtsR;protein_id=EFB92016.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 13592 14191 . - . ID=gene-HMPREF7215_0483;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=HMPREF7215_0483 GCA_000177335.1|ADFP01000007.1 Genbank CDS 13592 14191 . - 0 ID=cds-EFB92017.1;Parent=gene-HMPREF7215_0483;Dbxref=NCBI_GP:EFB92017.1;Name=EFB92017.1;Note=identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023;gbkey=CDS;gene=plsY;locus_tag=HMPREF7215_0483;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=EFB92017.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 14248 14364 . - . ID=gene-HMPREF7215_0484;Name=HMPREF7215_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0484 GCA_000177335.1|ADFP01000007.1 Genbank CDS 14248 14364 . - 0 ID=cds-EFB92018.1;Parent=gene-HMPREF7215_0484;Dbxref=NCBI_GP:EFB92018.1;Name=EFB92018.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0484;product=hypothetical protein;protein_id=EFB92018.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 14321 16372 . - . ID=gene-HMPREF7215_0485;Name=HMPREF7215_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0485 GCA_000177335.1|ADFP01000007.1 Genbank CDS 14321 16372 . - 0 ID=cds-EFB92019.1;Parent=gene-HMPREF7215_0485;Dbxref=NCBI_GP:EFB92019.1;Name=EFB92019.1;gbkey=CDS;locus_tag=HMPREF7215_0485;product=hypothetical protein;protein_id=EFB92019.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 16546 16884 . - . ID=gene-HMPREF7215_0486;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;locus_tag=HMPREF7215_0486 GCA_000177335.1|ADFP01000007.1 Genbank CDS 16546 16884 . - 0 ID=cds-EFB92020.1;Parent=gene-HMPREF7215_0486;Dbxref=NCBI_GP:EFB92020.1;Name=EFB92020.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;gene=hup;locus_tag=HMPREF7215_0486;product=DNA-binding protein HU;protein_id=EFB92020.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 17108 17530 . + . ID=gene-HMPREF7215_0487;Name=HMPREF7215_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0487 GCA_000177335.1|ADFP01000007.1 Genbank CDS 17108 17530 . + 0 ID=cds-EFB92021.1;Parent=gene-HMPREF7215_0487;Dbxref=NCBI_GP:EFB92021.1;Name=EFB92021.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=HMPREF7215_0487;product=glyoxalase family protein;protein_id=EFB92021.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 17589 18044 . - . ID=gene-HMPREF7215_0488;Name=HMPREF7215_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0488 GCA_000177335.1|ADFP01000007.1 Genbank CDS 17589 18044 . - 0 ID=cds-EFB92022.1;Parent=gene-HMPREF7215_0488;Dbxref=NCBI_GP:EFB92022.1;Name=EFB92022.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF7215_0488;product=transcriptional regulator%2C Rrf2 family;protein_id=EFB92022.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 18157 18366 . - . ID=gene-HMPREF7215_0489;Name=HMPREF7215_0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0489 GCA_000177335.1|ADFP01000007.1 Genbank CDS 18157 18366 . - 0 ID=cds-EFB92023.1;Parent=gene-HMPREF7215_0489;Dbxref=NCBI_GP:EFB92023.1;Name=EFB92023.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0489;product=hypothetical protein;protein_id=EFB92023.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 18513 19922 . + . ID=gene-HMPREF7215_0490;Name=HMPREF7215_0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0490 GCA_000177335.1|ADFP01000007.1 Genbank CDS 18513 19922 . + 0 ID=cds-EFB92024.1;Parent=gene-HMPREF7215_0490;Dbxref=NCBI_GP:EFB92024.1;Name=EFB92024.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF7215_0490;product=MATE efflux family protein;protein_id=EFB92024.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 20349 20432 . + . ID=gene-HMPREF7215_0491;Name=HMPREF7215_0491;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_0491 GCA_000177335.1|ADFP01000007.1 Genbank tRNA 20349 20432 . + . ID=rna-HMPREF7215_0491;Parent=gene-HMPREF7215_0491;gbkey=tRNA;locus_tag=HMPREF7215_0491;product=tRNA-Leu GCA_000177335.1|ADFP01000007.1 Genbank exon 20349 20432 . + . ID=exon-HMPREF7215_0491-1;Parent=rna-HMPREF7215_0491;gbkey=tRNA;locus_tag=HMPREF7215_0491;product=tRNA-Leu GCA_000177335.1|ADFP01000007.1 Genbank gene 20596 21411 . - . ID=gene-HMPREF7215_0492;Name=HMPREF7215_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0492 GCA_000177335.1|ADFP01000007.1 Genbank CDS 20596 21411 . - 0 ID=cds-EFB92025.1;Parent=gene-HMPREF7215_0492;Dbxref=NCBI_GP:EFB92025.1;Name=EFB92025.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0492;product=hypothetical protein;protein_id=EFB92025.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 21404 22522 . - . ID=gene-HMPREF7215_0493;Name=HMPREF7215_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0493 GCA_000177335.1|ADFP01000007.1 Genbank CDS 21404 22522 . - 0 ID=cds-EFB92026.1;Parent=gene-HMPREF7215_0493;Dbxref=NCBI_GP:EFB92026.1;Name=EFB92026.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF7215_0493;product=periplasmic binding protein;protein_id=EFB92026.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 22532 23290 . - . ID=gene-HMPREF7215_0494;Name=HMPREF7215_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0494 GCA_000177335.1|ADFP01000007.1 Genbank CDS 22532 23290 . - 0 ID=cds-EFB92027.1;Parent=gene-HMPREF7215_0494;Dbxref=NCBI_GP:EFB92027.1;Name=EFB92027.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF7215_0494;product=ABC transporter%2C ATP-binding protein;protein_id=EFB92027.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 23292 24326 . - . ID=gene-HMPREF7215_0495;Name=HMPREF7215_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0495 GCA_000177335.1|ADFP01000007.1 Genbank CDS 23292 24326 . - 0 ID=cds-EFB92028.1;Parent=gene-HMPREF7215_0495;Dbxref=NCBI_GP:EFB92028.1;Name=EFB92028.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF7215_0495;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFB92028.1;transl_table=11 GCA_000177335.1|ADFP01000007.1 Genbank gene 24649 26049 . + . ID=gene-HMPREF7215_0496;Name=HMPREF7215_0496;end_range=26049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0496;partial=true GCA_000177335.1|ADFP01000007.1 Genbank CDS 24649 26049 . + 0 ID=cds-EFB92029.1;Parent=gene-HMPREF7215_0496;Dbxref=NCBI_GP:EFB92029.1;Name=EFB92029.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;end_range=26049,.;gbkey=CDS;locus_tag=HMPREF7215_0496;partial=true;product=DEAD/DEAH box helicase;protein_id=EFB92029.1;transl_table=11 ##sequence-region ADFP01000006.1 1 11477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000006.1 Genbank region 1 11477 . + . ID=ADFP01000006.1:1..11477;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000006.1 Genbank gene 92 169 . + . ID=gene-HMPREF7215_1909;Name=HMPREF7215_1909;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_1909 GCA_000177335.1|ADFP01000006.1 Genbank tRNA 92 169 . + . ID=rna-HMPREF7215_1909;Parent=gene-HMPREF7215_1909;gbkey=tRNA;locus_tag=HMPREF7215_1909;product=tRNA-Ala GCA_000177335.1|ADFP01000006.1 Genbank exon 92 169 . + . ID=exon-HMPREF7215_1909-1;Parent=rna-HMPREF7215_1909;gbkey=tRNA;locus_tag=HMPREF7215_1909;product=tRNA-Ala GCA_000177335.1|ADFP01000006.1 Genbank gene 174 1301 . + . ID=gene-HMPREF7215_1910;Name=HMPREF7215_1910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1910 GCA_000177335.1|ADFP01000006.1 Genbank CDS 174 1301 . + 0 ID=cds-EFB92030.1;Parent=gene-HMPREF7215_1910;Dbxref=NCBI_GP:EFB92030.1;Name=EFB92030.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;locus_tag=HMPREF7215_1910;product=oxidoreductase%2C FAD/FMN-binding protein;protein_id=EFB92030.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 1490 1642 . + . ID=gene-HMPREF7215_1911;Name=HMPREF7215_1911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1911 GCA_000177335.1|ADFP01000006.1 Genbank CDS 1490 1642 . + 0 ID=cds-EFB92031.1;Parent=gene-HMPREF7215_1911;Dbxref=NCBI_GP:EFB92031.1;Name=EFB92031.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1911;product=hypothetical protein;protein_id=EFB92031.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 1801 2967 . + . ID=gene-HMPREF7215_1912;Name=HMPREF7215_1912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1912 GCA_000177335.1|ADFP01000006.1 Genbank CDS 1801 2967 . + 0 ID=cds-EFB92032.1;Parent=gene-HMPREF7215_1912;Dbxref=NCBI_GP:EFB92032.1;Name=EFB92032.1;gbkey=CDS;locus_tag=HMPREF7215_1912;product=hypothetical protein;protein_id=EFB92032.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 3034 4215 . + . ID=gene-HMPREF7215_1913;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1913 GCA_000177335.1|ADFP01000006.1 Genbank CDS 3034 4215 . + 0 ID=cds-EFB92033.1;Parent=gene-HMPREF7215_1913;Dbxref=NCBI_GP:EFB92033.1;Name=EFB92033.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;gene=cpsA;locus_tag=HMPREF7215_1913;product=thermostable carboxypeptidase 1;protein_id=EFB92033.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 4282 4515 . - . ID=gene-HMPREF7215_1914;Name=HMPREF7215_1914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1914 GCA_000177335.1|ADFP01000006.1 Genbank CDS 4282 4515 . - 0 ID=cds-EFB92034.1;Parent=gene-HMPREF7215_1914;Dbxref=NCBI_GP:EFB92034.1;Name=EFB92034.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1914;product=hypothetical protein;protein_id=EFB92034.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank binding_site 4295 4403 . + . ID=id-ADFP01000006.1:4295..4403;Note=TPP riboswitch (THI element)%3B Rfam score 48.31;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 GCA_000177335.1|ADFP01000006.1 Genbank gene 4516 5829 . + . ID=gene-HMPREF7215_1916;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=HMPREF7215_1916 GCA_000177335.1|ADFP01000006.1 Genbank CDS 4516 5829 . + 0 ID=cds-EFB92035.1;Parent=gene-HMPREF7215_1916;Dbxref=NCBI_GP:EFB92035.1;Name=EFB92035.1;Note=identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190;gbkey=CDS;gene=thiC;locus_tag=HMPREF7215_1916;product=thiamine biosynthesis protein ThiC;protein_id=EFB92035.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 5996 6820 . - . ID=gene-HMPREF7215_1917;Name=HMPREF7215_1917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1917 GCA_000177335.1|ADFP01000006.1 Genbank CDS 5996 6820 . - 0 ID=cds-EFB92036.1;Parent=gene-HMPREF7215_1917;Dbxref=NCBI_GP:EFB92036.1;Name=EFB92036.1;gbkey=CDS;locus_tag=HMPREF7215_1917;product=hypothetical protein;protein_id=EFB92036.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 6878 7327 . - . ID=gene-HMPREF7215_1918;Name=HMPREF7215_1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1918 GCA_000177335.1|ADFP01000006.1 Genbank CDS 6878 7327 . - 0 ID=cds-EFB92037.1;Parent=gene-HMPREF7215_1918;Dbxref=NCBI_GP:EFB92037.1;Name=EFB92037.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1918;product=hypothetical protein;protein_id=EFB92037.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 7313 8623 . + . ID=gene-HMPREF7215_1919;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=HMPREF7215_1919 GCA_000177335.1|ADFP01000006.1 Genbank CDS 7313 8623 . + 0 ID=cds-EFB92038.1;Parent=gene-HMPREF7215_1919;Dbxref=NCBI_GP:EFB92038.1;Name=EFB92038.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048;gbkey=CDS;gene=lysA;locus_tag=HMPREF7215_1919;product=diaminopimelate decarboxylase;protein_id=EFB92038.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 8601 10334 . + . ID=gene-HMPREF7215_1920;Name=HMPREF7215_1920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1920 GCA_000177335.1|ADFP01000006.1 Genbank CDS 8601 10334 . + 0 ID=cds-EFB92039.1;Parent=gene-HMPREF7215_1920;Dbxref=NCBI_GP:EFB92039.1;Name=EFB92039.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF7215_1920;product=Na+/H+ antiporter family protein;protein_id=EFB92039.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 10397 10534 . + . ID=gene-HMPREF7215_1921;Name=HMPREF7215_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1921 GCA_000177335.1|ADFP01000006.1 Genbank CDS 10397 10534 . + 0 ID=cds-EFB92040.1;Parent=gene-HMPREF7215_1921;Dbxref=NCBI_GP:EFB92040.1;Name=EFB92040.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_1921;product=hypothetical protein;protein_id=EFB92040.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 10606 11355 . + . ID=gene-HMPREF7215_1922;Name=HMPREF7215_1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1922 GCA_000177335.1|ADFP01000006.1 Genbank CDS 10606 11355 . + 0 ID=cds-EFB92041.1;Parent=gene-HMPREF7215_1922;Dbxref=NCBI_GP:EFB92041.1;Name=EFB92041.1;Note=identified by match to protein family HMM PF01643;gbkey=CDS;locus_tag=HMPREF7215_1922;product=Acyl-ACP thioesterase;protein_id=EFB92041.1;transl_table=11 GCA_000177335.1|ADFP01000006.1 Genbank gene 11352 11477 . + . ID=gene-HMPREF7215_1923;Name=HMPREF7215_1923;end_range=11477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1923;partial=true GCA_000177335.1|ADFP01000006.1 Genbank CDS 11352 11477 . + 0 ID=cds-EFB92042.1;Parent=gene-HMPREF7215_1923;Dbxref=NCBI_GP:EFB92042.1;Name=EFB92042.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=11477,.;gbkey=CDS;locus_tag=HMPREF7215_1923;partial=true;product=hypothetical protein;protein_id=EFB92042.1;transl_table=11 ##sequence-region ADFP01000005.1 1 1106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000005.1 Genbank region 1 1106 . + . ID=ADFP01000005.1:1..1106;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000005.1 Genbank gene 1 161 . - . ID=gene-HMPREF7215_1655;Name=HMPREF7215_1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1655;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000005.1 Genbank CDS 1 161 . - 0 ID=cds-EFB92043.1;Parent=gene-HMPREF7215_1655;Dbxref=NCBI_GP:EFB92043.1;Name=EFB92043.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01815;gbkey=CDS;locus_tag=HMPREF7215_1655;partial=true;product=rop protein;protein_id=EFB92043.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000005.1 Genbank gene 265 528 . - . ID=gene-HMPREF7215_1656;Name=HMPREF7215_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_1656 GCA_000177335.1|ADFP01000005.1 Genbank CDS 265 528 . - 0 ID=cds-EFB92044.1;Parent=gene-HMPREF7215_1656;Dbxref=NCBI_GP:EFB92044.1;Name=EFB92044.1;gbkey=CDS;locus_tag=HMPREF7215_1656;product=hypothetical protein;protein_id=EFB92044.1;transl_table=11 ##sequence-region ADFP01000004.1 1 19216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000004.1 Genbank region 1 19216 . + . ID=ADFP01000004.1:1..19216;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000004.1 Genbank gene 515 1858 . + . ID=gene-HMPREF7215_2324;Name=HMPREF7215_2324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2324 GCA_000177335.1|ADFP01000004.1 Genbank CDS 515 1858 . + 0 ID=cds-EFB92045.1;Parent=gene-HMPREF7215_2324;Dbxref=NCBI_GP:EFB92045.1;Name=EFB92045.1;gbkey=CDS;locus_tag=HMPREF7215_2324;product=hypothetical protein;protein_id=EFB92045.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 1957 3780 . + . ID=gene-HMPREF7215_2325;Name=HMPREF7215_2325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2325 GCA_000177335.1|ADFP01000004.1 Genbank CDS 1957 3780 . + 0 ID=cds-EFB92046.1;Parent=gene-HMPREF7215_2325;Dbxref=NCBI_GP:EFB92046.1;Name=EFB92046.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF7215_2325;product=ABC transporter%2C permease protein;protein_id=EFB92046.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 3786 5420 . + . ID=gene-HMPREF7215_2326;Name=HMPREF7215_2326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2326 GCA_000177335.1|ADFP01000004.1 Genbank CDS 3786 5420 . + 0 ID=cds-EFB92047.1;Parent=gene-HMPREF7215_2326;Dbxref=NCBI_GP:EFB92047.1;Name=EFB92047.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;locus_tag=HMPREF7215_2326;product=ABC transporter%2C ATP-binding protein;protein_id=EFB92047.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 5469 5873 . + . ID=gene-HMPREF7215_2327;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=HMPREF7215_2327 GCA_000177335.1|ADFP01000004.1 Genbank CDS 5469 5873 . + 0 ID=cds-EFB92048.1;Parent=gene-HMPREF7215_2327;Dbxref=NCBI_GP:EFB92048.1;Name=EFB92048.1;gbkey=CDS;gene=pgmB;locus_tag=HMPREF7215_2327;product=beta-phosphoglucomutase;protein_id=EFB92048.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 5888 6835 . - . ID=gene-HMPREF7215_2328;Name=HMPREF7215_2328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2328 GCA_000177335.1|ADFP01000004.1 Genbank CDS 5888 6835 . - 0 ID=cds-EFB92049.1;Parent=gene-HMPREF7215_2328;Dbxref=NCBI_GP:EFB92049.1;Name=EFB92049.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352;gbkey=CDS;locus_tag=HMPREF7215_2328;product=ABC transporter%2C ATP-binding protein;protein_id=EFB92049.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 6828 7883 . - . ID=gene-HMPREF7215_2329;Name=HMPREF7215_2329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2329 GCA_000177335.1|ADFP01000004.1 Genbank CDS 6828 7883 . - 0 ID=cds-EFB92050.1;Parent=gene-HMPREF7215_2329;Dbxref=NCBI_GP:EFB92050.1;Name=EFB92050.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF7215_2329;product=ABC transporter%2C ATP-binding protein;protein_id=EFB92050.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 7898 8878 . - . ID=gene-HMPREF7215_2330;Name=HMPREF7215_2330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2330 GCA_000177335.1|ADFP01000004.1 Genbank CDS 7898 8878 . - 0 ID=cds-EFB92051.1;Parent=gene-HMPREF7215_2330;Dbxref=NCBI_GP:EFB92051.1;Name=EFB92051.1;Note=identified by match to protein family HMM PF00528%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_2330;product=ABC transporter%2C permease protein;protein_id=EFB92051.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 8875 9783 . - . ID=gene-HMPREF7215_2331;Name=HMPREF7215_2331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2331 GCA_000177335.1|ADFP01000004.1 Genbank CDS 8875 9783 . - 0 ID=cds-EFB92052.1;Parent=gene-HMPREF7215_2331;Dbxref=NCBI_GP:EFB92052.1;Name=EFB92052.1;Note=identified by match to protein family HMM PF00528%3B overlaps another CDS with the same product name;gbkey=CDS;locus_tag=HMPREF7215_2331;product=ABC transporter%2C permease protein;protein_id=EFB92052.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 10071 11900 . - . ID=gene-HMPREF7215_2332;Name=HMPREF7215_2332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2332 GCA_000177335.1|ADFP01000004.1 Genbank CDS 10071 11900 . - 0 ID=cds-EFB92053.1;Parent=gene-HMPREF7215_2332;Dbxref=NCBI_GP:EFB92053.1;Name=EFB92053.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_2332;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB92053.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 12296 13339 . - . ID=gene-HMPREF7215_2333;Name=HMPREF7215_2333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2333 GCA_000177335.1|ADFP01000004.1 Genbank CDS 12296 13339 . - 0 ID=cds-EFB92054.1;Parent=gene-HMPREF7215_2333;Dbxref=NCBI_GP:EFB92054.1;Name=EFB92054.1;Note=identified by match to protein family HMM PF03417;gbkey=CDS;locus_tag=HMPREF7215_2333;product=Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;protein_id=EFB92054.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 13796 14332 . + . ID=gene-HMPREF7215_2334;Name=HMPREF7215_2334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2334 GCA_000177335.1|ADFP01000004.1 Genbank CDS 13796 14332 . + 0 ID=cds-EFB92055.1;Parent=gene-HMPREF7215_2334;Dbxref=NCBI_GP:EFB92055.1;Name=EFB92055.1;gbkey=CDS;locus_tag=HMPREF7215_2334;product=hypothetical protein;protein_id=EFB92055.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 14489 14707 . + . ID=gene-HMPREF7215_2335;Name=HMPREF7215_2335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2335 GCA_000177335.1|ADFP01000004.1 Genbank CDS 14489 14707 . + 0 ID=cds-EFB92056.1;Parent=gene-HMPREF7215_2335;Dbxref=NCBI_GP:EFB92056.1;Name=EFB92056.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF7215_2335;product=transposase;protein_id=EFB92056.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 15046 16245 . - . ID=gene-HMPREF7215_2336;Name=HMPREF7215_2336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2336 GCA_000177335.1|ADFP01000004.1 Genbank CDS 15046 16245 . - 0 ID=cds-EFB92057.1;Parent=gene-HMPREF7215_2336;Dbxref=NCBI_GP:EFB92057.1;Name=EFB92057.1;gbkey=CDS;locus_tag=HMPREF7215_2336;product=hypothetical protein;protein_id=EFB92057.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 16288 16458 . - . ID=gene-HMPREF7215_2337;Name=HMPREF7215_2337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2337 GCA_000177335.1|ADFP01000004.1 Genbank CDS 16288 16458 . - 0 ID=cds-EFB92058.1;Parent=gene-HMPREF7215_2337;Dbxref=NCBI_GP:EFB92058.1;Name=EFB92058.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_2337;product=hypothetical protein;protein_id=EFB92058.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 16519 16872 . - . ID=gene-HMPREF7215_2338;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=HMPREF7215_2338 GCA_000177335.1|ADFP01000004.1 Genbank CDS 16519 16872 . - 0 ID=cds-EFB92059.1;Parent=gene-HMPREF7215_2338;Dbxref=NCBI_GP:EFB92059.1;Name=EFB92059.1;Note=identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024;gbkey=CDS;gene=rplS;locus_tag=HMPREF7215_2338;product=ribosomal protein L19;protein_id=EFB92059.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 16903 18045 . - . ID=gene-HMPREF7215_2339;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HMPREF7215_2339 GCA_000177335.1|ADFP01000004.1 Genbank CDS 16903 18045 . - 0 ID=cds-EFB92060.1;Parent=gene-HMPREF7215_2339;Dbxref=NCBI_GP:EFB92060.1;Name=EFB92060.1;Note=identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088;gbkey=CDS;gene=trmD;locus_tag=HMPREF7215_2339;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=EFB92060.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 18042 18569 . - . ID=gene-HMPREF7215_2340;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=HMPREF7215_2340 GCA_000177335.1|ADFP01000004.1 Genbank CDS 18042 18569 . - 0 ID=cds-EFB92061.1;Parent=gene-HMPREF7215_2340;Dbxref=NCBI_GP:EFB92061.1;Name=EFB92061.1;Note=identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273;gbkey=CDS;gene=rimM;locus_tag=HMPREF7215_2340;product=16S rRNA processing protein RimM;protein_id=EFB92061.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 18572 18844 . - . ID=gene-HMPREF7215_2341;Name=HMPREF7215_2341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2341 GCA_000177335.1|ADFP01000004.1 Genbank CDS 18572 18844 . - 0 ID=cds-EFB92062.1;Parent=gene-HMPREF7215_2341;Dbxref=NCBI_GP:EFB92062.1;Name=EFB92062.1;Note=identified by match to protein family HMM PF07650;gbkey=CDS;locus_tag=HMPREF7215_2341;product=KH domain protein;protein_id=EFB92062.1;transl_table=11 GCA_000177335.1|ADFP01000004.1 Genbank gene 18844 19110 . - . ID=gene-HMPREF7215_2342;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF7215_2342 GCA_000177335.1|ADFP01000004.1 Genbank CDS 18844 19110 . - 0 ID=cds-EFB92063.1;Parent=gene-HMPREF7215_2342;Dbxref=NCBI_GP:EFB92063.1;Name=EFB92063.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002;gbkey=CDS;gene=rpsP;locus_tag=HMPREF7215_2342;product=ribosomal protein S16;protein_id=EFB92063.1;transl_table=11 ##sequence-region ADFP01000003.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000003.1 Genbank region 1 514 . + . ID=ADFP01000003.1:1..514;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens ##sequence-region ADFP01000002.1 1 2362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000002.1 Genbank region 1 2362 . + . ID=ADFP01000002.1:1..2362;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000002.1 Genbank gene 1 142 . - . ID=gene-HMPREF7215_0769;Name=HMPREF7215_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0769;partial=true;start_range=.,1 GCA_000177335.1|ADFP01000002.1 Genbank CDS 1 142 . - 0 ID=cds-EFB92064.1;Parent=gene-HMPREF7215_0769;Dbxref=NCBI_GP:EFB92064.1;Name=EFB92064.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF7215_0769;partial=true;product=hypothetical protein;protein_id=EFB92064.1;start_range=.,1;transl_table=11 GCA_000177335.1|ADFP01000002.1 Genbank gene 139 1071 . - . ID=gene-HMPREF7215_0770;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=HMPREF7215_0770 GCA_000177335.1|ADFP01000002.1 Genbank CDS 139 1071 . - 0 ID=cds-EFB92065.1;Parent=gene-HMPREF7215_0770;Dbxref=NCBI_GP:EFB92065.1;Name=EFB92065.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670;gbkey=CDS;gene=pyrB;locus_tag=HMPREF7215_0770;product=aspartate carbamoyltransferase;protein_id=EFB92065.1;transl_table=11 GCA_000177335.1|ADFP01000002.1 Genbank gene 1279 1644 . + . ID=gene-HMPREF7215_0771;Name=HMPREF7215_0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0771 GCA_000177335.1|ADFP01000002.1 Genbank CDS 1279 1644 . + 0 ID=cds-EFB92066.1;Parent=gene-HMPREF7215_0771;Dbxref=NCBI_GP:EFB92066.1;Name=EFB92066.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=HMPREF7215_0771;product=glyoxalase family protein;protein_id=EFB92066.1;transl_table=11 GCA_000177335.1|ADFP01000002.1 Genbank gene 1790 2326 . - . ID=gene-HMPREF7215_0772;Name=HMPREF7215_0772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_0772 GCA_000177335.1|ADFP01000002.1 Genbank CDS 1790 2326 . - 0 ID=cds-EFB92067.1;Parent=gene-HMPREF7215_0772;Dbxref=NCBI_GP:EFB92067.1;Name=EFB92067.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF7215_0772;product=hypothetical protein;protein_id=EFB92067.1;transl_table=11 ##sequence-region ADFP01000001.1 1 6112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=352165 GCA_000177335.1|ADFP01000001.1 Genbank region 1 6112 . + . ID=ADFP01000001.1:1..6112;Dbxref=taxon:352165;gbkey=Src;genome=genomic;mol_type=genomic DNA;strain=W5455;type-material=type strain of Pyramidobacter piscolens GCA_000177335.1|ADFP01000001.1 Genbank gene 104 190 . + . ID=gene-HMPREF7215_2498;Name=HMPREF7215_2498;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2498 GCA_000177335.1|ADFP01000001.1 Genbank tRNA 104 190 . + . ID=rna-HMPREF7215_2498;Parent=gene-HMPREF7215_2498;gbkey=tRNA;locus_tag=HMPREF7215_2498;product=tRNA-Leu GCA_000177335.1|ADFP01000001.1 Genbank exon 104 190 . + . ID=exon-HMPREF7215_2498-1;Parent=rna-HMPREF7215_2498;gbkey=tRNA;locus_tag=HMPREF7215_2498;product=tRNA-Leu GCA_000177335.1|ADFP01000001.1 Genbank gene 209 286 . + . ID=gene-HMPREF7215_2499;Name=HMPREF7215_2499;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF7215_2499 GCA_000177335.1|ADFP01000001.1 Genbank tRNA 209 286 . + . ID=rna-HMPREF7215_2499;Parent=gene-HMPREF7215_2499;gbkey=tRNA;locus_tag=HMPREF7215_2499;product=tRNA-Lys GCA_000177335.1|ADFP01000001.1 Genbank exon 209 286 . + . ID=exon-HMPREF7215_2499-1;Parent=rna-HMPREF7215_2499;gbkey=tRNA;locus_tag=HMPREF7215_2499;product=tRNA-Lys GCA_000177335.1|ADFP01000001.1 Genbank binding_site 391 493 . + . ID=id-ADFP01000001.1:391..493;Note=TPP riboswitch (THI element)%3B Rfam score 51.87;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 GCA_000177335.1|ADFP01000001.1 Genbank gene 642 1172 . + . ID=gene-HMPREF7215_2501;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=HMPREF7215_2501 GCA_000177335.1|ADFP01000001.1 Genbank CDS 642 1172 . + 0 ID=cds-EFB92068.1;Parent=gene-HMPREF7215_2501;Dbxref=NCBI_GP:EFB92068.1;Name=EFB92068.1;Note=identified by match to protein family HMM TIGR02359;gbkey=CDS;gene=thiW;locus_tag=HMPREF7215_2501;product=protein ThiW;protein_id=EFB92068.1;transl_table=11 GCA_000177335.1|ADFP01000001.1 Genbank gene 1156 1965 . + . ID=gene-HMPREF7215_2502;Name=HMPREF7215_2502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2502 GCA_000177335.1|ADFP01000001.1 Genbank CDS 1156 1965 . + 0 ID=cds-EFB92069.1;Parent=gene-HMPREF7215_2502;Dbxref=NCBI_GP:EFB92069.1;Name=EFB92069.1;Note=identified by match to protein family HMM PF02110;gbkey=CDS;locus_tag=HMPREF7215_2502;product=hydroxyethylthiazole kinase;protein_id=EFB92069.1;transl_table=11 GCA_000177335.1|ADFP01000001.1 Genbank gene 2324 3391 . + . ID=gene-HMPREF7215_2503;Name=HMPREF7215_2503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2503 GCA_000177335.1|ADFP01000001.1 Genbank CDS 2324 3391 . + 0 ID=cds-EFB92070.1;Parent=gene-HMPREF7215_2503;Dbxref=NCBI_GP:EFB92070.1;Name=EFB92070.1;Note=identified by match to protein family HMM PF01820%3B match to protein family HMM PF02222%3B match to protein family HMM PF07478%3B match to protein family HMM TIGR01205;gbkey=CDS;locus_tag=HMPREF7215_2503;product=D-ala D-ala ligase N-terminal domain protein;protein_id=EFB92070.1;transl_table=11 GCA_000177335.1|ADFP01000001.1 Genbank gene 3512 4363 . - . ID=gene-HMPREF7215_2504;Name=HMPREF7215_2504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2504 GCA_000177335.1|ADFP01000001.1 Genbank CDS 3512 4363 . - 0 ID=cds-EFB92071.1;Parent=gene-HMPREF7215_2504;Dbxref=NCBI_GP:EFB92071.1;Name=EFB92071.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF7215_2504;product=LysR substrate binding domain protein;protein_id=EFB92071.1;transl_table=11 GCA_000177335.1|ADFP01000001.1 Genbank gene 4514 6058 . + . ID=gene-HMPREF7215_2505;Name=HMPREF7215_2505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF7215_2505 GCA_000177335.1|ADFP01000001.1 Genbank CDS 4514 6058 . + 0 ID=cds-EFB92072.1;Parent=gene-HMPREF7215_2505;Dbxref=NCBI_GP:EFB92072.1;Name=EFB92072.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF7215_2505;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFB92072.1;transl_table=11 ###