##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM17755v1 #!genome-build-accession NCBI_Assembly:GCA_000177555.1 ##sequence-region ADGP01000034.1 1 7811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000034.1 Genbank region 1 7811 . + . ID=ADGP01000034.1:1..7811;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000034.1 Genbank gene 26 703 . + . ID=gene-HMPREF0889_0102;Name=HMPREF0889_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0102 GCA_000177555.1|ADGP01000034.1 Genbank CDS 26 703 . + 0 ID=cds-EFD93230.1;Parent=gene-HMPREF0889_0102;Dbxref=NCBI_GP:EFD93230.1;Name=EFD93230.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0102;product=hypothetical protein;protein_id=EFD93230.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 757 1005 . + . ID=gene-HMPREF0889_0103;Name=HMPREF0889_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0103 GCA_000177555.1|ADGP01000034.1 Genbank CDS 757 1005 . + 0 ID=cds-EFD93231.1;Parent=gene-HMPREF0889_0103;Dbxref=NCBI_GP:EFD93231.1;Name=EFD93231.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0103;product=hypothetical protein;protein_id=EFD93231.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 977 1510 . + . ID=gene-HMPREF0889_0104;Name=HMPREF0889_0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0104 GCA_000177555.1|ADGP01000034.1 Genbank CDS 977 1510 . + 0 ID=cds-EFD93232.1;Parent=gene-HMPREF0889_0104;Dbxref=NCBI_GP:EFD93232.1;Name=EFD93232.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;locus_tag=HMPREF0889_0104;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EFD93232.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 1535 1732 . + . ID=gene-HMPREF0889_0105;Name=HMPREF0889_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0105 GCA_000177555.1|ADGP01000034.1 Genbank CDS 1535 1732 . + 0 ID=cds-EFD93233.1;Parent=gene-HMPREF0889_0105;Dbxref=NCBI_GP:EFD93233.1;Name=EFD93233.1;gbkey=CDS;locus_tag=HMPREF0889_0105;product=hypothetical protein;protein_id=EFD93233.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 1765 1998 . + . ID=gene-HMPREF0889_0106;Name=HMPREF0889_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0106 GCA_000177555.1|ADGP01000034.1 Genbank CDS 1765 1998 . + 0 ID=cds-EFD93234.1;Parent=gene-HMPREF0889_0106;Dbxref=NCBI_GP:EFD93234.1;Name=EFD93234.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0106;product=hypothetical protein;protein_id=EFD93234.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 2070 2735 . + . ID=gene-HMPREF0889_0107;Name=HMPREF0889_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0107 GCA_000177555.1|ADGP01000034.1 Genbank CDS 2070 2735 . + 0 ID=cds-EFD93235.1;Parent=gene-HMPREF0889_0107;Dbxref=NCBI_GP:EFD93235.1;Name=EFD93235.1;gbkey=CDS;locus_tag=HMPREF0889_0107;product=RNA polymerase sigma factor%2C sigma-70 family;protein_id=EFD93235.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 2948 3382 . + . ID=gene-HMPREF0889_0108;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=HMPREF0889_0108 GCA_000177555.1|ADGP01000034.1 Genbank CDS 2948 3382 . + 0 ID=cds-EFD93236.1;Parent=gene-HMPREF0889_0108;Dbxref=NCBI_GP:EFD93236.1;Name=EFD93236.1;Note=identified by match to protein family HMM PF03852%3B match to protein family HMM TIGR00632;gbkey=CDS;gene=vsr;locus_tag=HMPREF0889_0108;product=DNA mismatch endonuclease Vsr;protein_id=EFD93236.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 3643 4074 . - . ID=gene-HMPREF0889_0109;Name=HMPREF0889_0109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0109 GCA_000177555.1|ADGP01000034.1 Genbank CDS 3643 4074 . - 0 ID=cds-EFD93237.1;Parent=gene-HMPREF0889_0109;Dbxref=NCBI_GP:EFD93237.1;Name=EFD93237.1;gbkey=CDS;locus_tag=HMPREF0889_0109;product=hypothetical protein;protein_id=EFD93237.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 4141 4278 . + . ID=gene-HMPREF0889_0110;Name=HMPREF0889_0110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0110 GCA_000177555.1|ADGP01000034.1 Genbank CDS 4141 4278 . + 0 ID=cds-EFD93238.1;Parent=gene-HMPREF0889_0110;Dbxref=NCBI_GP:EFD93238.1;Name=EFD93238.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0110;product=hypothetical protein;protein_id=EFD93238.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 4318 5283 . + . ID=gene-HMPREF0889_0111;Name=HMPREF0889_0111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0111 GCA_000177555.1|ADGP01000034.1 Genbank CDS 4318 5283 . + 0 ID=cds-EFD93239.1;Parent=gene-HMPREF0889_0111;Dbxref=NCBI_GP:EFD93239.1;Name=EFD93239.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF0889_0111;product=periplasmic binding protein;protein_id=EFD93239.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 5280 6293 . + . ID=gene-HMPREF0889_0112;Name=HMPREF0889_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0112 GCA_000177555.1|ADGP01000034.1 Genbank CDS 5280 6293 . + 0 ID=cds-EFD93240.1;Parent=gene-HMPREF0889_0112;Dbxref=NCBI_GP:EFD93240.1;Name=EFD93240.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF0889_0112;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFD93240.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 6286 7074 . + . ID=gene-HMPREF0889_0113;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0113 GCA_000177555.1|ADGP01000034.1 Genbank CDS 6286 7074 . + 0 ID=cds-EFD93241.1;Parent=gene-HMPREF0889_0113;Dbxref=NCBI_GP:EFD93241.1;Name=EFD93241.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=fhuC;locus_tag=HMPREF0889_0113;product=ferrichrome ABC transporter%2C ATP-binding protein FhuC;protein_id=EFD93241.1;transl_table=11 GCA_000177555.1|ADGP01000034.1 Genbank gene 7111 7811 . + . ID=gene-HMPREF0889_0114;Name=tonB;end_range=7811,.;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0114;partial=true GCA_000177555.1|ADGP01000034.1 Genbank CDS 7111 7811 . + 0 ID=cds-EFD93242.1;Parent=gene-HMPREF0889_0114;Dbxref=NCBI_GP:EFD93242.1;Name=EFD93242.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF07715;end_range=7811,.;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0114;partial=true;product=TonB-dependent receptor plug domain protein;protein_id=EFD93242.1;transl_table=11 ##sequence-region ADGP01000033.1 1 209420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000033.1 Genbank region 1 209420 . + . ID=ADGP01000033.1:1..209420;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000033.1 Genbank gene 1 1561 . + . ID=gene-HMPREF0889_0662;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0662;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000033.1 Genbank CDS 1 1561 . + 1 ID=cds-EFD93243.1;Parent=gene-HMPREF0889_0662;Dbxref=NCBI_GP:EFD93243.1;Name=EFD93243.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00593;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0662;partial=true;product=TonB-dependent receptor;protein_id=EFD93243.1;start_range=.,1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 1686 3401 . + . ID=gene-HMPREF0889_0663;Name=HMPREF0889_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0663 GCA_000177555.1|ADGP01000033.1 Genbank CDS 1686 3401 . + 0 ID=cds-EFD93244.1;Parent=gene-HMPREF0889_0663;Dbxref=NCBI_GP:EFD93244.1;Name=EFD93244.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF0889_0663;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93244.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 3843 4148 . + . ID=gene-HMPREF0889_0664;Name=HMPREF0889_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0664 GCA_000177555.1|ADGP01000033.1 Genbank CDS 3843 4148 . + 0 ID=cds-EFD93245.1;Parent=gene-HMPREF0889_0664;Dbxref=NCBI_GP:EFD93245.1;Name=EFD93245.1;gbkey=CDS;locus_tag=HMPREF0889_0664;product=hypothetical protein;protein_id=EFD93245.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 4499 5287 . + . ID=gene-HMPREF0889_0665;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0665 GCA_000177555.1|ADGP01000033.1 Genbank CDS 4499 5287 . + 0 ID=cds-EFD93246.1;Parent=gene-HMPREF0889_0665;Dbxref=NCBI_GP:EFD93246.1;Name=EFD93246.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;gene=etfB;locus_tag=HMPREF0889_0665;product=electron transfer flavoprotein domain protein;protein_id=EFD93246.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 5300 6301 . + . ID=gene-HMPREF0889_0666;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0666 GCA_000177555.1|ADGP01000033.1 Genbank CDS 5300 6301 . + 0 ID=cds-EFD93247.1;Parent=gene-HMPREF0889_0666;Dbxref=NCBI_GP:EFD93247.1;Name=EFD93247.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;locus_tag=HMPREF0889_0666;product=electron transfer flavoprotein FAD-binding domain protein;protein_id=EFD93247.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 6329 6511 . - . ID=gene-HMPREF0889_0667;Name=HMPREF0889_0667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0667 GCA_000177555.1|ADGP01000033.1 Genbank CDS 6329 6511 . - 0 ID=cds-EFD93248.1;Parent=gene-HMPREF0889_0667;Dbxref=NCBI_GP:EFD93248.1;Name=EFD93248.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0667;product=hypothetical protein;protein_id=EFD93248.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 6488 6883 . + . ID=gene-HMPREF0889_0668;Name=HMPREF0889_0668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0668 GCA_000177555.1|ADGP01000033.1 Genbank CDS 6488 6883 . + 0 ID=cds-EFD93249.1;Parent=gene-HMPREF0889_0668;Dbxref=NCBI_GP:EFD93249.1;Name=EFD93249.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0668;product=hypothetical protein;protein_id=EFD93249.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 6895 9468 . + . ID=gene-HMPREF0889_0669;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0669 GCA_000177555.1|ADGP01000033.1 Genbank CDS 6895 9468 . + 0 ID=cds-EFD93250.1;Parent=gene-HMPREF0889_0669;Dbxref=NCBI_GP:EFD93250.1;Name=EFD93250.1;Note=identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;gene=polA;locus_tag=HMPREF0889_0669;product=DNA-directed DNA polymerase;protein_id=EFD93250.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 9479 10321 . + . ID=gene-HMPREF0889_0670;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=HMPREF0889_0670 GCA_000177555.1|ADGP01000033.1 Genbank CDS 9479 10321 . + 0 ID=cds-EFD93251.1;Parent=gene-HMPREF0889_0670;Dbxref=NCBI_GP:EFD93251.1;Name=EFD93251.1;Note=identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577;gbkey=CDS;gene=mutM;locus_tag=HMPREF0889_0670;product=DNA-formamidopyrimidine glycosylase;protein_id=EFD93251.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 10314 10934 . + . ID=gene-HMPREF0889_0671;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0671 GCA_000177555.1|ADGP01000033.1 Genbank CDS 10314 10934 . + 0 ID=cds-EFD93252.1;Parent=gene-HMPREF0889_0671;Dbxref=NCBI_GP:EFD93252.1;Name=EFD93252.1;Note=identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;locus_tag=HMPREF0889_0671;product=dephospho-CoA kinase;protein_id=EFD93252.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 10931 11512 . + . ID=gene-HMPREF0889_0672;Name=HMPREF0889_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0672 GCA_000177555.1|ADGP01000033.1 Genbank CDS 10931 11512 . + 0 ID=cds-EFD93253.1;Parent=gene-HMPREF0889_0672;Dbxref=NCBI_GP:EFD93253.1;Name=EFD93253.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;locus_tag=HMPREF0889_0672;product=transglycosylase SLT domain protein;protein_id=EFD93253.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 11528 11612 . + . ID=gene-HMPREF0889_0673;Name=HMPREF0889_0673;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0673 GCA_000177555.1|ADGP01000033.1 Genbank tRNA 11528 11612 . + . ID=rna-HMPREF0889_0673;Parent=gene-HMPREF0889_0673;gbkey=tRNA;locus_tag=HMPREF0889_0673;product=tRNA-Leu GCA_000177555.1|ADGP01000033.1 Genbank exon 11528 11612 . + . ID=exon-HMPREF0889_0673-1;Parent=rna-HMPREF0889_0673;gbkey=tRNA;locus_tag=HMPREF0889_0673;product=tRNA-Leu GCA_000177555.1|ADGP01000033.1 Genbank gene 11685 12347 . + . ID=gene-HMPREF0889_0674;Name=HMPREF0889_0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0674 GCA_000177555.1|ADGP01000033.1 Genbank CDS 11685 12347 . + 0 ID=cds-EFD93254.1;Parent=gene-HMPREF0889_0674;Dbxref=NCBI_GP:EFD93254.1;Name=EFD93254.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0674;product=hypothetical protein;protein_id=EFD93254.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 12423 12884 . + . ID=gene-HMPREF0889_0675;Name=HMPREF0889_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0675 GCA_000177555.1|ADGP01000033.1 Genbank CDS 12423 12884 . + 0 ID=cds-EFD93255.1;Parent=gene-HMPREF0889_0675;Dbxref=NCBI_GP:EFD93255.1;Name=EFD93255.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02576;gbkey=CDS;locus_tag=HMPREF0889_0675;product=hypothetical protein;protein_id=EFD93255.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 12906 14024 . + . ID=gene-HMPREF0889_0676;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0676 GCA_000177555.1|ADGP01000033.1 Genbank CDS 12906 14024 . + 0 ID=cds-EFD93256.1;Parent=gene-HMPREF0889_0676;Dbxref=NCBI_GP:EFD93256.1;Name=EFD93256.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953;gbkey=CDS;gene=nusA;locus_tag=HMPREF0889_0676;product=transcription termination factor NusA;protein_id=EFD93256.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 14064 14294 . + . ID=gene-HMPREF0889_0677;Name=HMPREF0889_0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0677 GCA_000177555.1|ADGP01000033.1 Genbank CDS 14064 14294 . + 0 ID=cds-EFD93257.1;Parent=gene-HMPREF0889_0677;Dbxref=NCBI_GP:EFD93257.1;Name=EFD93257.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04296;gbkey=CDS;locus_tag=HMPREF0889_0677;product=hypothetical protein;protein_id=EFD93257.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 14291 14605 . + . ID=gene-HMPREF0889_0678;Name=HMPREF0889_0678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0678 GCA_000177555.1|ADGP01000033.1 Genbank CDS 14291 14605 . + 0 ID=cds-EFD93258.1;Parent=gene-HMPREF0889_0678;Dbxref=NCBI_GP:EFD93258.1;Name=EFD93258.1;Note=identified by match to protein family HMM PF01248;gbkey=CDS;locus_tag=HMPREF0889_0678;product=ribosomal protein L7Ae;protein_id=EFD93258.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 14619 17045 . + . ID=gene-HMPREF0889_0679;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0679 GCA_000177555.1|ADGP01000033.1 Genbank CDS 14619 17045 . + 0 ID=cds-EFD93259.1;Parent=gene-HMPREF0889_0679;Dbxref=NCBI_GP:EFD93259.1;Name=EFD93259.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487;gbkey=CDS;gene=infB;locus_tag=HMPREF0889_0679;product=translation initiation factor IF-2;protein_id=EFD93259.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 17060 17407 . + . ID=gene-HMPREF0889_0680;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0680 GCA_000177555.1|ADGP01000033.1 Genbank CDS 17060 17407 . + 0 ID=cds-EFD93260.1;Parent=gene-HMPREF0889_0680;Dbxref=NCBI_GP:EFD93260.1;Name=EFD93260.1;Note=identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082;gbkey=CDS;gene=rbfA;locus_tag=HMPREF0889_0680;product=ribosome-binding factor A;protein_id=EFD93260.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 17411 18355 . + . ID=gene-HMPREF0889_0681;Name=HMPREF0889_0681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0681 GCA_000177555.1|ADGP01000033.1 Genbank CDS 17411 18355 . + 0 ID=cds-EFD93261.1;Parent=gene-HMPREF0889_0681;Dbxref=NCBI_GP:EFD93261.1;Name=EFD93261.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF0889_0681;product=DHHA1 domain protein;protein_id=EFD93261.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 18352 19230 . + . ID=gene-HMPREF0889_0682;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0682 GCA_000177555.1|ADGP01000033.1 Genbank CDS 18352 19230 . + 0 ID=cds-EFD93262.1;Parent=gene-HMPREF0889_0682;Dbxref=NCBI_GP:EFD93262.1;Name=EFD93262.1;Note=identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431;gbkey=CDS;gene=truB;locus_tag=HMPREF0889_0682;product=tRNA pseudouridine synthase B;protein_id=EFD93262.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 19244 20206 . + . ID=gene-HMPREF0889_0683;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0683 GCA_000177555.1|ADGP01000033.1 Genbank CDS 19244 20206 . + 0 ID=cds-EFD93263.1;Parent=gene-HMPREF0889_0683;Dbxref=NCBI_GP:EFD93263.1;Name=EFD93263.1;Note=identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083;gbkey=CDS;gene=ribF;locus_tag=HMPREF0889_0683;product=riboflavin biosynthesis protein RibF;protein_id=EFD93263.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 20288 25570 . - . ID=gene-HMPREF0889_0684;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0684 GCA_000177555.1|ADGP01000033.1 Genbank CDS 20288 25570 . - 0 ID=cds-EFD93264.1;Parent=gene-HMPREF0889_0684;Dbxref=NCBI_GP:EFD93264.1;Name=EFD93264.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00593;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0684;product=TonB-dependent receptor;protein_id=EFD93264.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 26007 26129 . + . ID=gene-HMPREF0889_0685;Name=HMPREF0889_0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0685 GCA_000177555.1|ADGP01000033.1 Genbank CDS 26007 26129 . + 0 ID=cds-EFD93265.1;Parent=gene-HMPREF0889_0685;Dbxref=NCBI_GP:EFD93265.1;Name=EFD93265.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0685;product=hypothetical protein;protein_id=EFD93265.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 26142 26294 . + . ID=gene-HMPREF0889_0686;Name=HMPREF0889_0686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0686 GCA_000177555.1|ADGP01000033.1 Genbank CDS 26142 26294 . + 0 ID=cds-EFD93266.1;Parent=gene-HMPREF0889_0686;Dbxref=NCBI_GP:EFD93266.1;Name=EFD93266.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0686;product=hypothetical protein;protein_id=EFD93266.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 26263 27438 . + . ID=gene-HMPREF0889_0687;Name=HMPREF0889_0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0687 GCA_000177555.1|ADGP01000033.1 Genbank CDS 26263 27438 . + 0 ID=cds-EFD93267.1;Parent=gene-HMPREF0889_0687;Dbxref=NCBI_GP:EFD93267.1;Name=EFD93267.1;Note=identified by match to protein family HMM PF01808;gbkey=CDS;locus_tag=HMPREF0889_0687;product=AICARFT/IMPCHase bienzyme;protein_id=EFD93267.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 27630 28181 . - . ID=gene-HMPREF0889_0688;Name=HMPREF0889_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0688 GCA_000177555.1|ADGP01000033.1 Genbank CDS 27630 28181 . - 0 ID=cds-EFD93268.1;Parent=gene-HMPREF0889_0688;Dbxref=NCBI_GP:EFD93268.1;Name=EFD93268.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040;gbkey=CDS;locus_tag=HMPREF0889_0688;product=phosphodiesterase family protein;protein_id=EFD93268.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 28271 28789 . - . ID=gene-HMPREF0889_0689;Name=HMPREF0889_0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0689 GCA_000177555.1|ADGP01000033.1 Genbank CDS 28271 28789 . - 0 ID=cds-EFD93269.1;Parent=gene-HMPREF0889_0689;Dbxref=NCBI_GP:EFD93269.1;Name=EFD93269.1;gbkey=CDS;locus_tag=HMPREF0889_0689;product=hypothetical protein;protein_id=EFD93269.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 29010 29681 . + . ID=gene-HMPREF0889_0690;Name=HMPREF0889_0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0690 GCA_000177555.1|ADGP01000033.1 Genbank CDS 29010 29681 . + 0 ID=cds-EFD93270.1;Parent=gene-HMPREF0889_0690;Dbxref=NCBI_GP:EFD93270.1;Name=EFD93270.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;locus_tag=HMPREF0889_0690;product=5'-nucleotidase;protein_id=EFD93270.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 29681 32602 . + . ID=gene-HMPREF0889_0691;Name=HMPREF0889_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0691 GCA_000177555.1|ADGP01000033.1 Genbank CDS 29681 32602 . + 0 ID=cds-EFD93271.1;Parent=gene-HMPREF0889_0691;Dbxref=NCBI_GP:EFD93271.1;Name=EFD93271.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193%3B match to protein family HMM PF08367;gbkey=CDS;locus_tag=HMPREF0889_0691;product=peptidase M16 inactive domain protein;protein_id=EFD93271.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 32616 33566 . + . ID=gene-HMPREF0889_0692;Name=HMPREF0889_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0692 GCA_000177555.1|ADGP01000033.1 Genbank CDS 32616 33566 . + 0 ID=cds-EFD93272.1;Parent=gene-HMPREF0889_0692;Dbxref=NCBI_GP:EFD93272.1;Name=EFD93272.1;Note=identified by match to protein family HMM PF00749;gbkey=CDS;locus_tag=HMPREF0889_0692;product=tRNA ligase class I (E and Q)%2C catalytic domain protein;protein_id=EFD93272.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 33727 34167 . + . ID=gene-HMPREF0889_0693;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0693 GCA_000177555.1|ADGP01000033.1 Genbank CDS 33727 34167 . + 0 ID=cds-EFD93273.1;Parent=gene-HMPREF0889_0693;Dbxref=NCBI_GP:EFD93273.1;Name=EFD93273.1;Note=identified by match to protein family HMM PF02381%3B match to protein family HMM TIGR00242;gbkey=CDS;gene=mraZ;locus_tag=HMPREF0889_0693;product=protein MraZ;protein_id=EFD93273.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 34176 35108 . + . ID=gene-HMPREF0889_0694;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=HMPREF0889_0694 GCA_000177555.1|ADGP01000033.1 Genbank CDS 34176 35108 . + 0 ID=cds-EFD93274.1;Parent=gene-HMPREF0889_0694;Dbxref=NCBI_GP:EFD93274.1;Name=EFD93274.1;Note=identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;locus_tag=HMPREF0889_0694;product=S-adenosyl-methyltransferase MraW;protein_id=EFD93274.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 35148 35531 . + . ID=gene-HMPREF0889_0695;Name=HMPREF0889_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0695 GCA_000177555.1|ADGP01000033.1 Genbank CDS 35148 35531 . + 0 ID=cds-EFD93275.1;Parent=gene-HMPREF0889_0695;Dbxref=NCBI_GP:EFD93275.1;Name=EFD93275.1;gbkey=CDS;locus_tag=HMPREF0889_0695;product=putative cell division protein FtsL;protein_id=EFD93275.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 35630 37129 . + . ID=gene-HMPREF0889_0696;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0696 GCA_000177555.1|ADGP01000033.1 Genbank CDS 35630 37129 . + 0 ID=cds-EFD93276.1;Parent=gene-HMPREF0889_0696;Dbxref=NCBI_GP:EFD93276.1;Name=EFD93276.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085;gbkey=CDS;gene=murE;locus_tag=HMPREF0889_0696;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=EFD93276.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 37132 38508 . + . ID=gene-HMPREF0889_0697;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0697 GCA_000177555.1|ADGP01000033.1 Genbank CDS 37132 38508 . + 0 ID=cds-EFD93277.1;Parent=gene-HMPREF0889_0697;Dbxref=NCBI_GP:EFD93277.1;Name=EFD93277.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143;gbkey=CDS;gene=murF;locus_tag=HMPREF0889_0697;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=EFD93277.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 38514 39491 . + . ID=gene-HMPREF0889_0698;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=HMPREF0889_0698 GCA_000177555.1|ADGP01000033.1 Genbank CDS 38514 39491 . + 0 ID=cds-EFD93278.1;Parent=gene-HMPREF0889_0698;Dbxref=NCBI_GP:EFD93278.1;Name=EFD93278.1;Note=identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445;gbkey=CDS;gene=mraY;locus_tag=HMPREF0889_0698;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=EFD93278.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 39520 40884 . + . ID=gene-HMPREF0889_0699;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0699 GCA_000177555.1|ADGP01000033.1 Genbank CDS 39520 40884 . + 0 ID=cds-EFD93279.1;Parent=gene-HMPREF0889_0699;Dbxref=NCBI_GP:EFD93279.1;Name=EFD93279.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;locus_tag=HMPREF0889_0699;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=EFD93279.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 40916 42052 . + . ID=gene-HMPREF0889_0700;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0700 GCA_000177555.1|ADGP01000033.1 Genbank CDS 40916 42052 . + 0 ID=cds-EFD93280.1;Parent=gene-HMPREF0889_0700;Dbxref=NCBI_GP:EFD93280.1;Name=EFD93280.1;Note=identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133;gbkey=CDS;gene=murG;locus_tag=HMPREF0889_0700;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=EFD93280.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 42049 43443 . + . ID=gene-HMPREF0889_0701;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0701 GCA_000177555.1|ADGP01000033.1 Genbank CDS 42049 43443 . + 0 ID=cds-EFD93281.1;Parent=gene-HMPREF0889_0701;Dbxref=NCBI_GP:EFD93281.1;Name=EFD93281.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082;gbkey=CDS;gene=murC;locus_tag=HMPREF0889_0701;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=EFD93281.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 43443 44384 . + . ID=gene-HMPREF0889_0702;Name=HMPREF0889_0702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0702 GCA_000177555.1|ADGP01000033.1 Genbank CDS 43443 44384 . + 0 ID=cds-EFD93282.1;Parent=gene-HMPREF0889_0702;Dbxref=NCBI_GP:EFD93282.1;Name=EFD93282.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205;gbkey=CDS;locus_tag=HMPREF0889_0702;product=D-ala D-ala ligase N-terminal domain protein;protein_id=EFD93282.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 44412 45302 . + . ID=gene-HMPREF0889_0703;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0703 GCA_000177555.1|ADGP01000033.1 Genbank CDS 44412 45302 . + 0 ID=cds-EFD93283.1;Parent=gene-HMPREF0889_0703;Dbxref=NCBI_GP:EFD93283.1;Name=EFD93283.1;Note=identified by match to protein family HMM PF08478;gbkey=CDS;gene=ftsQ;locus_tag=HMPREF0889_0703;product=POTRA domain protein%2C FtsQ-type;protein_id=EFD93283.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 45426 46451 . + . ID=gene-HMPREF0889_0704;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0704 GCA_000177555.1|ADGP01000033.1 Genbank CDS 45426 46451 . + 0 ID=cds-EFD93284.1;Parent=gene-HMPREF0889_0704;Dbxref=NCBI_GP:EFD93284.1;Name=EFD93284.1;Note=identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;locus_tag=HMPREF0889_0704;product=cell division protein FtsZ;protein_id=EFD93284.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 46520 46993 . + . ID=gene-HMPREF0889_0705;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0705 GCA_000177555.1|ADGP01000033.1 Genbank CDS 46520 46993 . + 0 ID=cds-EFD93285.1;Parent=gene-HMPREF0889_0705;Dbxref=NCBI_GP:EFD93285.1;Name=EFD93285.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;gene=nrdR;locus_tag=HMPREF0889_0705;product=transcriptional regulator NrdR;protein_id=EFD93285.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 47011 48495 . + . ID=gene-HMPREF0889_0706;Name=rfaE;gbkey=Gene;gene=rfaE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0706 GCA_000177555.1|ADGP01000033.1 Genbank CDS 47011 48495 . + 0 ID=cds-EFD93286.1;Parent=gene-HMPREF0889_0706;Dbxref=NCBI_GP:EFD93286.1;Name=EFD93286.1;Note=identified by match to protein family HMM PF00294%3B match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR02199;gbkey=CDS;gene=rfaE;locus_tag=HMPREF0889_0706;product=bifunctional protein RfaE%2C domain II;protein_id=EFD93286.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 48568 49098 . + . ID=gene-HMPREF0889_0707;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0707 GCA_000177555.1|ADGP01000033.1 Genbank CDS 48568 49098 . + 0 ID=cds-EFD93287.1;Parent=gene-HMPREF0889_0707;Dbxref=NCBI_GP:EFD93287.1;Name=EFD93287.1;Note=identified by match to protein family HMM PF08645%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662;gbkey=CDS;gene=gmhB;locus_tag=HMPREF0889_0707;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=EFD93287.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 49085 50116 . + . ID=gene-HMPREF0889_0708;Name=HMPREF0889_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0708 GCA_000177555.1|ADGP01000033.1 Genbank CDS 49085 50116 . + 0 ID=cds-EFD93288.1;Parent=gene-HMPREF0889_0708;Dbxref=NCBI_GP:EFD93288.1;Name=EFD93288.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF0889_0708;product=putative lipopolysaccharide heptosyltransferase I;protein_id=EFD93288.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 50202 50786 . + . ID=gene-HMPREF0889_0709;Name=HMPREF0889_0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0709 GCA_000177555.1|ADGP01000033.1 Genbank CDS 50202 50786 . + 0 ID=cds-EFD93289.1;Parent=gene-HMPREF0889_0709;Dbxref=NCBI_GP:EFD93289.1;Name=EFD93289.1;Note=outer membrane insertion C-terminal signal;gbkey=CDS;locus_tag=HMPREF0889_0709;product=outer membrane insertion signal domain protein;protein_id=EFD93289.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 50931 52088 . + . ID=gene-HMPREF0889_0710;Name=HMPREF0889_0710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0710 GCA_000177555.1|ADGP01000033.1 Genbank CDS 50931 52088 . + 0 ID=cds-EFD93290.1;Parent=gene-HMPREF0889_0710;Dbxref=NCBI_GP:EFD93290.1;Name=EFD93290.1;Note=identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=HMPREF0889_0710;product=aminotransferase%2C class V;protein_id=EFD93290.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 52085 53173 . + . ID=gene-HMPREF0889_0711;Name=trmU;gbkey=Gene;gene=trmU;gene_biotype=protein_coding;locus_tag=HMPREF0889_0711 GCA_000177555.1|ADGP01000033.1 Genbank CDS 52085 53173 . + 0 ID=cds-EFD93291.1;Parent=gene-HMPREF0889_0711;Dbxref=NCBI_GP:EFD93291.1;Name=EFD93291.1;Note=identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420;gbkey=CDS;gene=trmU;locus_tag=HMPREF0889_0711;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=EFD93291.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 53190 54992 . + . ID=gene-HMPREF0889_0712;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0712 GCA_000177555.1|ADGP01000033.1 Genbank CDS 53190 54992 . + 0 ID=cds-EFD93292.1;Parent=gene-HMPREF0889_0712;Dbxref=NCBI_GP:EFD93292.1;Name=EFD93292.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393;gbkey=CDS;gene=lepA;locus_tag=HMPREF0889_0712;product=GTP-binding protein LepA;protein_id=EFD93292.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 54989 56107 . + . ID=gene-HMPREF0889_0713;Name=HMPREF0889_0713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0713 GCA_000177555.1|ADGP01000033.1 Genbank CDS 54989 56107 . + 0 ID=cds-EFD93293.1;Parent=gene-HMPREF0889_0713;Dbxref=NCBI_GP:EFD93293.1;Name=EFD93293.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539;gbkey=CDS;locus_tag=HMPREF0889_0713;product=putative oxygen-independent coproporphyrinogen III oxidase;protein_id=EFD93293.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 56484 56897 . + . ID=gene-HMPREF0889_0714;Name=HMPREF0889_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0714 GCA_000177555.1|ADGP01000033.1 Genbank CDS 56484 56897 . + 0 ID=cds-EFD93294.1;Parent=gene-HMPREF0889_0714;Dbxref=NCBI_GP:EFD93294.1;Name=EFD93294.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;locus_tag=HMPREF0889_0714;product=hypothetical protein;protein_id=EFD93294.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 56911 57336 . + . ID=gene-HMPREF0889_0715;Name=HMPREF0889_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0715 GCA_000177555.1|ADGP01000033.1 Genbank CDS 56911 57336 . + 0 ID=cds-EFD93295.1;Parent=gene-HMPREF0889_0715;Dbxref=NCBI_GP:EFD93295.1;Name=EFD93295.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;locus_tag=HMPREF0889_0715;product=hypothetical protein;protein_id=EFD93295.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 57369 58511 . + . ID=gene-HMPREF0889_0716;Name=acdA;gbkey=Gene;gene=acdA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0716 GCA_000177555.1|ADGP01000033.1 Genbank CDS 57369 58511 . + 0 ID=cds-EFD93296.1;Parent=gene-HMPREF0889_0716;Dbxref=NCBI_GP:EFD93296.1;Name=EFD93296.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;gene=acdA;locus_tag=HMPREF0889_0716;product=acyl-CoA dehydrogenase%2C C-terminal domain protein;protein_id=EFD93296.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank sequence_feature 58531 58730 . + . ID=id-ADGP01000033.1:58531..58730;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000033.1 Genbank gene 58777 59802 . + . ID=gene-HMPREF0889_0718;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0718 GCA_000177555.1|ADGP01000033.1 Genbank CDS 58777 59802 . + 0 ID=cds-EFD93297.1;Parent=gene-HMPREF0889_0718;Dbxref=NCBI_GP:EFD93297.1;Name=EFD93297.1;Note=identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468;gbkey=CDS;gene=pheS;locus_tag=HMPREF0889_0718;product=phenylalanine--tRNA ligase%2C alpha subunit;protein_id=EFD93297.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 59818 62250 . + . ID=gene-HMPREF0889_0720;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HMPREF0889_0720 GCA_000177555.1|ADGP01000033.1 Genbank CDS 59818 62250 . + 0 ID=cds-EFD93298.1;Parent=gene-HMPREF0889_0720;Dbxref=NCBI_GP:EFD93298.1;Name=EFD93298.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472;gbkey=CDS;gene=pheT;locus_tag=HMPREF0889_0720;product=phenylalanine--tRNA ligase%2C beta subunit;protein_id=EFD93298.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 62232 62399 . - . ID=gene-HMPREF0889_0719;Name=HMPREF0889_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0719 GCA_000177555.1|ADGP01000033.1 Genbank CDS 62232 62399 . - 0 ID=cds-EFD93299.1;Parent=gene-HMPREF0889_0719;Dbxref=NCBI_GP:EFD93299.1;Name=EFD93299.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0719;product=hypothetical protein;protein_id=EFD93299.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 62531 63856 . + . ID=gene-HMPREF0889_0721;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=HMPREF0889_0721 GCA_000177555.1|ADGP01000033.1 Genbank CDS 62531 63856 . + 0 ID=cds-EFD93300.1;Parent=gene-HMPREF0889_0721;Dbxref=NCBI_GP:EFD93300.1;Name=EFD93300.1;Note=identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115;gbkey=CDS;gene=tig;locus_tag=HMPREF0889_0721;product=trigger factor;protein_id=EFD93300.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 63875 64477 . + . ID=gene-HMPREF0889_0722;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0722 GCA_000177555.1|ADGP01000033.1 Genbank CDS 63875 64477 . + 0 ID=cds-EFD93301.1;Parent=gene-HMPREF0889_0722;Dbxref=NCBI_GP:EFD93301.1;Name=EFD93301.1;Note=identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493;gbkey=CDS;gene=clpP;locus_tag=HMPREF0889_0722;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=EFD93301.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 64489 65721 . + . ID=gene-HMPREF0889_0723;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF0889_0723 GCA_000177555.1|ADGP01000033.1 Genbank CDS 64489 65721 . + 0 ID=cds-EFD93302.1;Parent=gene-HMPREF0889_0723;Dbxref=NCBI_GP:EFD93302.1;Name=EFD93302.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382;gbkey=CDS;gene=clpX;locus_tag=HMPREF0889_0723;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpX;protein_id=EFD93302.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 65795 68110 . + . ID=gene-HMPREF0889_0724;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=HMPREF0889_0724 GCA_000177555.1|ADGP01000033.1 Genbank CDS 65795 68110 . + 0 ID=cds-EFD93303.1;Parent=gene-HMPREF0889_0724;Dbxref=NCBI_GP:EFD93303.1;Name=EFD93303.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon;locus_tag=HMPREF0889_0724;product=endopeptidase La;protein_id=EFD93303.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 68112 68732 . + . ID=gene-HMPREF0889_0725;Name=ysxC;gbkey=Gene;gene=ysxC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0725 GCA_000177555.1|ADGP01000033.1 Genbank CDS 68112 68732 . + 0 ID=cds-EFD93304.1;Parent=gene-HMPREF0889_0725;Dbxref=NCBI_GP:EFD93304.1;Name=EFD93304.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03598;gbkey=CDS;gene=ysxC;locus_tag=HMPREF0889_0725;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=EFD93304.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 68918 69064 . + . ID=gene-HMPREF0889_0726;Name=HMPREF0889_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0726 GCA_000177555.1|ADGP01000033.1 Genbank CDS 68918 69064 . + 0 ID=cds-EFD93305.1;Parent=gene-HMPREF0889_0726;Dbxref=NCBI_GP:EFD93305.1;Name=EFD93305.1;gbkey=CDS;locus_tag=HMPREF0889_0726;product=hypothetical protein;protein_id=EFD93305.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 69209 71614 . + . ID=gene-HMPREF0889_0727;Name=HMPREF0889_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0727 GCA_000177555.1|ADGP01000033.1 Genbank CDS 69209 71614 . + 0 ID=cds-EFD93306.1;Parent=gene-HMPREF0889_0727;Dbxref=NCBI_GP:EFD93306.1;Name=EFD93306.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01774;gbkey=CDS;locus_tag=HMPREF0889_0727;product=formate C-acetyltransferase;protein_id=EFD93306.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 71640 72566 . + . ID=gene-HMPREF0889_0728;Name=HMPREF0889_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0728 GCA_000177555.1|ADGP01000033.1 Genbank CDS 71640 72566 . + 0 ID=cds-EFD93307.1;Parent=gene-HMPREF0889_0728;Dbxref=NCBI_GP:EFD93307.1;Name=EFD93307.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;locus_tag=HMPREF0889_0728;product=glycyl-radical enzyme activating protein family protein;protein_id=EFD93307.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 72617 72730 . + . ID=gene-HMPREF0889_0729;Name=HMPREF0889_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0729 GCA_000177555.1|ADGP01000033.1 Genbank CDS 72617 72730 . + 0 ID=cds-EFD93308.1;Parent=gene-HMPREF0889_0729;Dbxref=NCBI_GP:EFD93308.1;Name=EFD93308.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0729;product=hypothetical protein;protein_id=EFD93308.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 72749 74077 . + . ID=gene-HMPREF0889_0730;Name=HMPREF0889_0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0730 GCA_000177555.1|ADGP01000033.1 Genbank CDS 72749 74077 . + 0 ID=cds-EFD93309.1;Parent=gene-HMPREF0889_0730;Dbxref=NCBI_GP:EFD93309.1;Name=EFD93309.1;Note=identified by match to protein family HMM PF03051;gbkey=CDS;locus_tag=HMPREF0889_0730;product=peptidase C1-like family;protein_id=EFD93309.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 74300 75340 . + . ID=gene-HMPREF0889_0731;Name=HMPREF0889_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0731 GCA_000177555.1|ADGP01000033.1 Genbank CDS 74300 75340 . + 0 ID=cds-EFD93310.1;Parent=gene-HMPREF0889_0731;Dbxref=NCBI_GP:EFD93310.1;Name=EFD93310.1;Note=identified by match to protein family HMM PF06723;gbkey=CDS;locus_tag=HMPREF0889_0731;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EFD93310.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 75343 76263 . + . ID=gene-HMPREF0889_0732;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0732 GCA_000177555.1|ADGP01000033.1 Genbank CDS 75343 76263 . + 0 ID=cds-EFD93311.1;Parent=gene-HMPREF0889_0732;Dbxref=NCBI_GP:EFD93311.1;Name=EFD93311.1;Note=identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219;gbkey=CDS;gene=mreC;locus_tag=HMPREF0889_0732;product=rod shape-determining protein MreC;protein_id=EFD93311.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 76260 76772 . + . ID=gene-HMPREF0889_0733;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0733 GCA_000177555.1|ADGP01000033.1 Genbank CDS 76260 76772 . + 0 ID=cds-EFD93312.1;Parent=gene-HMPREF0889_0733;Dbxref=NCBI_GP:EFD93312.1;Name=EFD93312.1;Note=identified by match to protein family HMM TIGR03426;gbkey=CDS;gene=mreD;locus_tag=HMPREF0889_0733;product=rod shape-determining protein MreD;protein_id=EFD93312.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 76790 78622 . + . ID=gene-HMPREF0889_0734;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0734 GCA_000177555.1|ADGP01000033.1 Genbank CDS 76790 78622 . + 0 ID=cds-EFD93313.1;Parent=gene-HMPREF0889_0734;Dbxref=NCBI_GP:EFD93313.1;Name=EFD93313.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423;gbkey=CDS;gene=mrdA;locus_tag=HMPREF0889_0734;product=penicillin-binding protein 2;protein_id=EFD93313.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 78637 79614 . + . ID=gene-HMPREF0889_0735;Name=HMPREF0889_0735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0735 GCA_000177555.1|ADGP01000033.1 Genbank CDS 78637 79614 . + 0 ID=cds-EFD93314.1;Parent=gene-HMPREF0889_0735;Dbxref=NCBI_GP:EFD93314.1;Name=EFD93314.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;locus_tag=HMPREF0889_0735;product=CobQ/CobB/MinD/ParA nucleotide binding domain protein;protein_id=EFD93314.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 79625 80725 . + . ID=gene-HMPREF0889_0736;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0736 GCA_000177555.1|ADGP01000033.1 Genbank CDS 79625 80725 . + 0 ID=cds-EFD93315.1;Parent=gene-HMPREF0889_0736;Dbxref=NCBI_GP:EFD93315.1;Name=EFD93315.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210;gbkey=CDS;gene=mrdB;locus_tag=HMPREF0889_0736;product=rod shape-determining protein RodA;protein_id=EFD93315.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 80778 82211 . + . ID=gene-HMPREF0889_0737;Name=HMPREF0889_0737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0737 GCA_000177555.1|ADGP01000033.1 Genbank CDS 80778 82211 . + 0 ID=cds-EFD93316.1;Parent=gene-HMPREF0889_0737;Dbxref=NCBI_GP:EFD93316.1;Name=EFD93316.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757;gbkey=CDS;locus_tag=HMPREF0889_0737;product=S1 RNA binding domain protein;protein_id=EFD93316.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 82411 83373 . + . ID=gene-HMPREF0889_0738;Name=HMPREF0889_0738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0738 GCA_000177555.1|ADGP01000033.1 Genbank CDS 82411 83373 . + 0 ID=cds-EFD93317.1;Parent=gene-HMPREF0889_0738;Dbxref=NCBI_GP:EFD93317.1;Name=EFD93317.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF0889_0738;product=lactate/malate dehydrogenase%2C NAD binding domain protein;protein_id=EFD93317.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 83458 83787 . - . ID=gene-HMPREF0889_0739;Name=HMPREF0889_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0739 GCA_000177555.1|ADGP01000033.1 Genbank CDS 83458 83787 . - 0 ID=cds-EFD93318.1;Parent=gene-HMPREF0889_0739;Dbxref=NCBI_GP:EFD93318.1;Name=EFD93318.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_0739;product=hypothetical protein;protein_id=EFD93318.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 83790 84224 . - . ID=gene-HMPREF0889_0740;Name=HMPREF0889_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0740 GCA_000177555.1|ADGP01000033.1 Genbank CDS 83790 84224 . - 0 ID=cds-EFD93319.1;Parent=gene-HMPREF0889_0740;Dbxref=NCBI_GP:EFD93319.1;Name=EFD93319.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_0740;product=putative exodeoxyribonuclease III;protein_id=EFD93319.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 84436 84708 . + . ID=gene-HMPREF0889_0741;Name=HMPREF0889_0741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0741 GCA_000177555.1|ADGP01000033.1 Genbank CDS 84436 84708 . + 0 ID=cds-EFD93320.1;Parent=gene-HMPREF0889_0741;Dbxref=NCBI_GP:EFD93320.1;Name=EFD93320.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF0889_0741;product=ACT domain protein;protein_id=EFD93320.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 84721 86079 . + . ID=gene-HMPREF0889_0742;Name=HMPREF0889_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0742 GCA_000177555.1|ADGP01000033.1 Genbank CDS 84721 86079 . + 0 ID=cds-EFD93321.1;Parent=gene-HMPREF0889_0742;Dbxref=NCBI_GP:EFD93321.1;Name=EFD93321.1;Note=identified by match to protein family HMM PF05167;gbkey=CDS;locus_tag=HMPREF0889_0742;product=hypothetical protein;protein_id=EFD93321.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 86116 87159 . + . ID=gene-HMPREF0889_0743;Name=HMPREF0889_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0743 GCA_000177555.1|ADGP01000033.1 Genbank CDS 86116 87159 . + 0 ID=cds-EFD93322.1;Parent=gene-HMPREF0889_0743;Dbxref=NCBI_GP:EFD93322.1;Name=EFD93322.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;locus_tag=HMPREF0889_0743;product=glycosyltransferase%2C group 4 family;protein_id=EFD93322.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 87197 88351 . + . ID=gene-HMPREF0889_0744;Name=HMPREF0889_0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0744 GCA_000177555.1|ADGP01000033.1 Genbank CDS 87197 88351 . + 0 ID=cds-EFD93323.1;Parent=gene-HMPREF0889_0744;Dbxref=NCBI_GP:EFD93323.1;Name=EFD93323.1;Note=identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236;gbkey=CDS;locus_tag=HMPREF0889_0744;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=EFD93323.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 88751 89035 . + . ID=gene-HMPREF0889_0745;Name=HMPREF0889_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0745 GCA_000177555.1|ADGP01000033.1 Genbank CDS 88751 89035 . + 0 ID=cds-EFD93324.1;Parent=gene-HMPREF0889_0745;Dbxref=NCBI_GP:EFD93324.1;Name=EFD93324.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0745;product=hypothetical protein;protein_id=EFD93324.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 89045 89431 . + . ID=gene-HMPREF0889_0746;Name=HMPREF0889_0746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0746 GCA_000177555.1|ADGP01000033.1 Genbank CDS 89045 89431 . + 0 ID=cds-EFD93325.1;Parent=gene-HMPREF0889_0746;Dbxref=NCBI_GP:EFD93325.1;Name=EFD93325.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0746;product=hypothetical protein;protein_id=EFD93325.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 89435 90106 . + . ID=gene-HMPREF0889_0747;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0747 GCA_000177555.1|ADGP01000033.1 Genbank CDS 89435 90106 . + 0 ID=cds-EFD93326.1;Parent=gene-HMPREF0889_0747;Dbxref=NCBI_GP:EFD93326.1;Name=EFD93326.1;Note=identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131;gbkey=CDS;gene=atpB;locus_tag=HMPREF0889_0747;product=ATP synthase F0%2C A subunit;protein_id=EFD93326.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 90157 90414 . + . ID=gene-HMPREF0889_0748;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0748 GCA_000177555.1|ADGP01000033.1 Genbank CDS 90157 90414 . + 0 ID=cds-EFD93327.1;Parent=gene-HMPREF0889_0748;Dbxref=NCBI_GP:EFD93327.1;Name=EFD93327.1;Note=identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260;gbkey=CDS;gene=atpE;locus_tag=HMPREF0889_0748;product=ATP synthase F0%2C C subunit;protein_id=EFD93327.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 90463 90957 . + . ID=gene-HMPREF0889_0749;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0749 GCA_000177555.1|ADGP01000033.1 Genbank CDS 90463 90957 . + 0 ID=cds-EFD93328.1;Parent=gene-HMPREF0889_0749;Dbxref=NCBI_GP:EFD93328.1;Name=EFD93328.1;Note=identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144;gbkey=CDS;gene=atpF;locus_tag=HMPREF0889_0749;product=ATP synthase F0%2C B subunit;protein_id=EFD93328.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 90960 91526 . + . ID=gene-HMPREF0889_0750;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=HMPREF0889_0750 GCA_000177555.1|ADGP01000033.1 Genbank CDS 90960 91526 . + 0 ID=cds-EFD93329.1;Parent=gene-HMPREF0889_0750;Dbxref=NCBI_GP:EFD93329.1;Name=EFD93329.1;Note=identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145;gbkey=CDS;gene=atpH;locus_tag=HMPREF0889_0750;product=ATP synthase F1%2C delta subunit;protein_id=EFD93329.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 91526 93061 . + . ID=gene-HMPREF0889_0751;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0751 GCA_000177555.1|ADGP01000033.1 Genbank CDS 91526 93061 . + 0 ID=cds-EFD93330.1;Parent=gene-HMPREF0889_0751;Dbxref=NCBI_GP:EFD93330.1;Name=EFD93330.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962;gbkey=CDS;gene=atpA;locus_tag=HMPREF0889_0751;product=ATP synthase F1%2C alpha subunit;protein_id=EFD93330.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 93065 93925 . + . ID=gene-HMPREF0889_0752;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0752 GCA_000177555.1|ADGP01000033.1 Genbank CDS 93065 93925 . + 0 ID=cds-EFD93331.1;Parent=gene-HMPREF0889_0752;Dbxref=NCBI_GP:EFD93331.1;Name=EFD93331.1;Note=identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146;gbkey=CDS;gene=atpG;locus_tag=HMPREF0889_0752;product=ATP synthase F1%2C gamma subunit;protein_id=EFD93331.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 93965 95383 . + . ID=gene-HMPREF0889_0753;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0753 GCA_000177555.1|ADGP01000033.1 Genbank CDS 93965 95383 . + 0 ID=cds-EFD93332.1;Parent=gene-HMPREF0889_0753;Dbxref=NCBI_GP:EFD93332.1;Name=EFD93332.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039;gbkey=CDS;gene=atpD;locus_tag=HMPREF0889_0753;product=ATP synthase F1%2C beta subunit;protein_id=EFD93332.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 95387 95809 . + . ID=gene-HMPREF0889_0754;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0754 GCA_000177555.1|ADGP01000033.1 Genbank CDS 95387 95809 . + 0 ID=cds-EFD93333.1;Parent=gene-HMPREF0889_0754;Dbxref=NCBI_GP:EFD93333.1;Name=EFD93333.1;Note=identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216;gbkey=CDS;gene=atpC;locus_tag=HMPREF0889_0754;product=ATP synthase F1%2C epsilon subunit;protein_id=EFD93333.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 95933 96238 . + . ID=gene-HMPREF0889_0755;Name=HMPREF0889_0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0755 GCA_000177555.1|ADGP01000033.1 Genbank CDS 95933 96238 . + 0 ID=cds-EFD93334.1;Parent=gene-HMPREF0889_0755;Dbxref=NCBI_GP:EFD93334.1;Name=EFD93334.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0755;product=hypothetical protein;protein_id=EFD93334.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 96421 96696 . + . ID=gene-HMPREF0889_0757;Name=HMPREF0889_0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0757 GCA_000177555.1|ADGP01000033.1 Genbank CDS 96421 96696 . + 0 ID=cds-EFD93335.1;Parent=gene-HMPREF0889_0757;Dbxref=NCBI_GP:EFD93335.1;Name=EFD93335.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0757;product=hypothetical protein;protein_id=EFD93335.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 96664 97998 . - . ID=gene-HMPREF0889_0756;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0756 GCA_000177555.1|ADGP01000033.1 Genbank CDS 96664 97998 . - 0 ID=cds-EFD93336.1;Parent=gene-HMPREF0889_0756;Dbxref=NCBI_GP:EFD93336.1;Name=EFD93336.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506;gbkey=CDS;gene=ribB;locus_tag=HMPREF0889_0756;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=EFD93336.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank binding_site 98119 98235 . - . ID=id-ADGP01000033.1:98119..98235;Note=FMN riboswitch (RFN element)%3B Rfam score 103.25;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050 GCA_000177555.1|ADGP01000033.1 Genbank gene 98464 99939 . - . ID=gene-HMPREF0889_0759;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0759 GCA_000177555.1|ADGP01000033.1 Genbank CDS 98464 99939 . - 0 ID=cds-EFD93337.1;Parent=gene-HMPREF0889_0759;Dbxref=NCBI_GP:EFD93337.1;Name=EFD93337.1;Note=identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506;gbkey=CDS;gene=ribB;locus_tag=HMPREF0889_0759;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=EFD93337.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank binding_site 100058 100174 . - . ID=id-ADGP01000033.1:100058..100174;Note=FMN riboswitch (RFN element)%3B Rfam score 102.97;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050 GCA_000177555.1|ADGP01000033.1 Genbank gene 100407 100550 . + . ID=gene-HMPREF0889_0761;Name=HMPREF0889_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0761 GCA_000177555.1|ADGP01000033.1 Genbank CDS 100407 100550 . + 0 ID=cds-EFD93338.1;Parent=gene-HMPREF0889_0761;Dbxref=NCBI_GP:EFD93338.1;Name=EFD93338.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0761;product=hypothetical protein;protein_id=EFD93338.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 100571 101974 . - . ID=gene-HMPREF0889_0762;Name=HMPREF0889_0762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0762 GCA_000177555.1|ADGP01000033.1 Genbank CDS 100571 101974 . - 0 ID=cds-EFD93339.1;Parent=gene-HMPREF0889_0762;Dbxref=NCBI_GP:EFD93339.1;Name=EFD93339.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF0889_0762;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EFD93339.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 102136 102474 . + . ID=gene-HMPREF0889_0763;Name=HMPREF0889_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0763 GCA_000177555.1|ADGP01000033.1 Genbank CDS 102136 102474 . + 0 ID=cds-EFD93340.1;Parent=gene-HMPREF0889_0763;Dbxref=NCBI_GP:EFD93340.1;Name=EFD93340.1;Note=identified by match to protein family HMM PF04977;gbkey=CDS;locus_tag=HMPREF0889_0763;product=septum formation initiator;protein_id=EFD93340.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 102593 103024 . + . ID=gene-HMPREF0889_0764;Name=HMPREF0889_0764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0764 GCA_000177555.1|ADGP01000033.1 Genbank CDS 102593 103024 . + 0 ID=cds-EFD93341.1;Parent=gene-HMPREF0889_0764;Dbxref=NCBI_GP:EFD93341.1;Name=EFD93341.1;Note=identified by match to protein family HMM PF00575;gbkey=CDS;locus_tag=HMPREF0889_0764;product=S1 RNA binding domain protein;protein_id=EFD93341.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 103121 104053 . + . ID=gene-HMPREF0889_0765;Name=HMPREF0889_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0765 GCA_000177555.1|ADGP01000033.1 Genbank CDS 103121 104053 . + 0 ID=cds-EFD93342.1;Parent=gene-HMPREF0889_0765;Dbxref=NCBI_GP:EFD93342.1;Name=EFD93342.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;locus_tag=HMPREF0889_0765;product=Ppx/GppA phosphatase family protein;protein_id=EFD93342.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 104050 105426 . + . ID=gene-HMPREF0889_0766;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0766 GCA_000177555.1|ADGP01000033.1 Genbank CDS 104050 105426 . + 0 ID=cds-EFD93343.1;Parent=gene-HMPREF0889_0766;Dbxref=NCBI_GP:EFD93343.1;Name=EFD93343.1;Note=identified by match to protein family HMM PF01171%3B match to protein family HMM PF09179%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433;gbkey=CDS;gene=tilS;locus_tag=HMPREF0889_0766;product=tRNA(Ile)-lysidine synthetase;protein_id=EFD93343.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 105410 105949 . + . ID=gene-HMPREF0889_0767;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=HMPREF0889_0767 GCA_000177555.1|ADGP01000033.1 Genbank CDS 105410 105949 . + 0 ID=cds-EFD93344.1;Parent=gene-HMPREF0889_0767;Dbxref=NCBI_GP:EFD93344.1;Name=EFD93344.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203;gbkey=CDS;gene=hpt;locus_tag=HMPREF0889_0767;product=hypoxanthine phosphoribosyltransferase;protein_id=EFD93344.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 106056 107996 . + . ID=gene-HMPREF0889_0768;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0768 GCA_000177555.1|ADGP01000033.1 Genbank CDS 106056 107996 . + 0 ID=cds-EFD93345.1;Parent=gene-HMPREF0889_0768;Dbxref=NCBI_GP:EFD93345.1;Name=EFD93345.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=hflB;locus_tag=HMPREF0889_0768;product=ATP-dependent metallopeptidase HflB;protein_id=EFD93345.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 108306 109292 . + . ID=gene-HMPREF0889_0769;Name=HMPREF0889_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0769 GCA_000177555.1|ADGP01000033.1 Genbank CDS 108306 109292 . + 0 ID=cds-EFD93346.1;Parent=gene-HMPREF0889_0769;Dbxref=NCBI_GP:EFD93346.1;Name=EFD93346.1;Note=identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121;gbkey=CDS;locus_tag=HMPREF0889_0769;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=EFD93346.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 109429 110193 . + . ID=gene-HMPREF0889_0770;Name=coaX;gbkey=Gene;gene=coaX;gene_biotype=protein_coding;locus_tag=HMPREF0889_0770 GCA_000177555.1|ADGP01000033.1 Genbank CDS 109429 110193 . + 0 ID=cds-EFD93347.1;Parent=gene-HMPREF0889_0770;Dbxref=NCBI_GP:EFD93347.1;Name=EFD93347.1;Note=identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671;gbkey=CDS;gene=coaX;locus_tag=HMPREF0889_0770;product=pantothenate kinase%2C type III;protein_id=EFD93347.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 110177 111172 . + . ID=gene-HMPREF0889_0771;Name=HMPREF0889_0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0771 GCA_000177555.1|ADGP01000033.1 Genbank CDS 110177 111172 . + 0 ID=cds-EFD93348.1;Parent=gene-HMPREF0889_0771;Dbxref=NCBI_GP:EFD93348.1;Name=EFD93348.1;Note=identified by match to protein family HMM PF01180%3B match to protein family HMM PF01207%3B match to protein family HMM TIGR00737;gbkey=CDS;locus_tag=HMPREF0889_0771;product=TIM-barrel protein%2C nifR3 family;protein_id=EFD93348.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 111285 111770 . + . ID=gene-HMPREF0889_0772;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0772 GCA_000177555.1|ADGP01000033.1 Genbank CDS 111285 111770 . + 0 ID=cds-EFD93349.1;Parent=gene-HMPREF0889_0772;Dbxref=NCBI_GP:EFD93349.1;Name=EFD93349.1;Note=identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;gene=greA;locus_tag=HMPREF0889_0772;product=prokaryotic transcription elongation factor%2C GreA/GreB domain protein;protein_id=EFD93349.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 111793 113325 . + . ID=gene-HMPREF0889_0773;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0773 GCA_000177555.1|ADGP01000033.1 Genbank CDS 111793 113325 . + 0 ID=cds-EFD93350.1;Parent=gene-HMPREF0889_0773;Dbxref=NCBI_GP:EFD93350.1;Name=EFD93350.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499;gbkey=CDS;gene=lysS;locus_tag=HMPREF0889_0773;product=lysine--tRNA ligase;protein_id=EFD93350.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 113863 114714 . + . ID=gene-HMPREF0889_0774;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0774 GCA_000177555.1|ADGP01000033.1 Genbank CDS 113863 114714 . + 0 ID=cds-EFD93351.1;Parent=gene-HMPREF0889_0774;Dbxref=NCBI_GP:EFD93351.1;Name=EFD93351.1;Note=identified by match to protein family HMM PF06970;gbkey=CDS;gene=repA;locus_tag=HMPREF0889_0774;product=replication initiator protein A domain protein;protein_id=EFD93351.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 114711 115562 . + . ID=gene-HMPREF0889_0775;Name=HMPREF0889_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0775 GCA_000177555.1|ADGP01000033.1 Genbank CDS 114711 115562 . + 0 ID=cds-EFD93352.1;Parent=gene-HMPREF0889_0775;Dbxref=NCBI_GP:EFD93352.1;Name=EFD93352.1;gbkey=CDS;locus_tag=HMPREF0889_0775;product=hypothetical protein;protein_id=EFD93352.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 115559 116044 . + . ID=gene-HMPREF0889_0776;Name=HMPREF0889_0776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0776 GCA_000177555.1|ADGP01000033.1 Genbank CDS 115559 116044 . + 0 ID=cds-EFD93353.1;Parent=gene-HMPREF0889_0776;Dbxref=NCBI_GP:EFD93353.1;Name=EFD93353.1;gbkey=CDS;locus_tag=HMPREF0889_0776;product=hypothetical protein;protein_id=EFD93353.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 116041 117825 . + . ID=gene-HMPREF0889_0777;Name=HMPREF0889_0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0777 GCA_000177555.1|ADGP01000033.1 Genbank CDS 116041 117825 . + 0 ID=cds-EFD93354.1;Parent=gene-HMPREF0889_0777;Dbxref=NCBI_GP:EFD93354.1;Name=EFD93354.1;Note=identified by match to protein family HMM PF02534;gbkey=CDS;locus_tag=HMPREF0889_0777;product=TraG/TraD family protein;protein_id=EFD93354.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 117993 118304 . + . ID=gene-HMPREF0889_0778;Name=HMPREF0889_0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0778 GCA_000177555.1|ADGP01000033.1 Genbank CDS 117993 118304 . + 0 ID=cds-EFD93355.1;Parent=gene-HMPREF0889_0778;Dbxref=NCBI_GP:EFD93355.1;Name=EFD93355.1;gbkey=CDS;locus_tag=HMPREF0889_0778;product=hypothetical protein;protein_id=EFD93355.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 118308 118448 . + . ID=gene-HMPREF0889_0779;Name=HMPREF0889_0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0779 GCA_000177555.1|ADGP01000033.1 Genbank CDS 118308 118448 . + 0 ID=cds-EFD93356.1;Parent=gene-HMPREF0889_0779;Dbxref=NCBI_GP:EFD93356.1;Name=EFD93356.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF0889_0779;product=hypothetical protein;protein_id=EFD93356.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 119089 121008 . + . ID=gene-HMPREF0889_0780;Name=HMPREF0889_0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0780 GCA_000177555.1|ADGP01000033.1 Genbank CDS 119089 121008 . + 0 ID=cds-EFD93357.1;Parent=gene-HMPREF0889_0780;Dbxref=NCBI_GP:EFD93357.1;Name=EFD93357.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231;gbkey=CDS;locus_tag=HMPREF0889_0780;product=putative translation elongation factor G;protein_id=EFD93357.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 121059 121826 . + . ID=gene-HMPREF0889_0781;Name=HMPREF0889_0781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0781 GCA_000177555.1|ADGP01000033.1 Genbank CDS 121059 121826 . + 0 ID=cds-EFD93358.1;Parent=gene-HMPREF0889_0781;Dbxref=NCBI_GP:EFD93358.1;Name=EFD93358.1;Note=identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF0889_0781;product=methyltransferase domain protein;protein_id=EFD93358.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 122787 123521 . + . ID=gene-HMPREF0889_0783;Name=HMPREF0889_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0783 GCA_000177555.1|ADGP01000033.1 Genbank CDS 122787 123521 . + 0 ID=cds-EFD93359.1;Parent=gene-HMPREF0889_0783;Dbxref=NCBI_GP:EFD93359.1;Name=EFD93359.1;gbkey=CDS;locus_tag=HMPREF0889_0783;product=hypothetical protein;protein_id=EFD93359.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 123472 124065 . - . ID=gene-HMPREF0889_0782;Name=HMPREF0889_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0782 GCA_000177555.1|ADGP01000033.1 Genbank CDS 123472 124065 . - 0 ID=cds-EFD93360.1;Parent=gene-HMPREF0889_0782;Dbxref=NCBI_GP:EFD93360.1;Name=EFD93360.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0782;product=hypothetical protein;protein_id=EFD93360.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 124033 125118 . + . ID=gene-HMPREF0889_0784;Name=HMPREF0889_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0784 GCA_000177555.1|ADGP01000033.1 Genbank CDS 124033 125118 . + 0 ID=cds-EFD93361.1;Parent=gene-HMPREF0889_0784;Dbxref=NCBI_GP:EFD93361.1;Name=EFD93361.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0784;product=hypothetical protein;protein_id=EFD93361.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 125567 126361 . + . ID=gene-HMPREF0889_0785;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0785 GCA_000177555.1|ADGP01000033.1 Genbank CDS 125567 126361 . + 0 ID=cds-EFD93362.1;Parent=gene-HMPREF0889_0785;Dbxref=NCBI_GP:EFD93362.1;Name=EFD93362.1;Note=identified by match to protein family HMM PF06970;gbkey=CDS;gene=repA;locus_tag=HMPREF0889_0785;product=replication initiator protein A domain protein;protein_id=EFD93362.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 126358 127200 . + . ID=gene-HMPREF0889_0786;Name=HMPREF0889_0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0786 GCA_000177555.1|ADGP01000033.1 Genbank CDS 126358 127200 . + 0 ID=cds-EFD93363.1;Parent=gene-HMPREF0889_0786;Dbxref=NCBI_GP:EFD93363.1;Name=EFD93363.1;Note=identified by match to protein family HMM PF01695;gbkey=CDS;locus_tag=HMPREF0889_0786;product=IstB-like ATP-binding protein;protein_id=EFD93363.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 127215 127409 . + . ID=gene-HMPREF0889_0787;Name=HMPREF0889_0787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0787 GCA_000177555.1|ADGP01000033.1 Genbank CDS 127215 127409 . + 0 ID=cds-EFD93364.1;Parent=gene-HMPREF0889_0787;Dbxref=NCBI_GP:EFD93364.1;Name=EFD93364.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0787;product=hypothetical protein;protein_id=EFD93364.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 127474 127674 . - . ID=gene-HMPREF0889_0788;Name=HMPREF0889_0788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0788 GCA_000177555.1|ADGP01000033.1 Genbank CDS 127474 127674 . - 0 ID=cds-EFD93365.1;Parent=gene-HMPREF0889_0788;Dbxref=NCBI_GP:EFD93365.1;Name=EFD93365.1;gbkey=CDS;locus_tag=HMPREF0889_0788;product=hypothetical protein;protein_id=EFD93365.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 127900 129516 . + . ID=gene-HMPREF0889_0789;Name=HMPREF0889_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0789 GCA_000177555.1|ADGP01000033.1 Genbank CDS 127900 129516 . + 0 ID=cds-EFD93366.1;Parent=gene-HMPREF0889_0789;Dbxref=NCBI_GP:EFD93366.1;Name=EFD93366.1;Note=identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508;gbkey=CDS;locus_tag=HMPREF0889_0789;product=resolvase%2C N-terminal domain protein;protein_id=EFD93366.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 129719 130582 . + . ID=gene-HMPREF0889_0790;Name=HMPREF0889_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0790 GCA_000177555.1|ADGP01000033.1 Genbank CDS 129719 130582 . + 0 ID=cds-EFD93367.1;Parent=gene-HMPREF0889_0790;Dbxref=NCBI_GP:EFD93367.1;Name=EFD93367.1;gbkey=CDS;locus_tag=HMPREF0889_0790;product=hypothetical protein;protein_id=EFD93367.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 130600 130863 . + . ID=gene-HMPREF0889_0791;Name=HMPREF0889_0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0791 GCA_000177555.1|ADGP01000033.1 Genbank CDS 130600 130863 . + 0 ID=cds-EFD93368.1;Parent=gene-HMPREF0889_0791;Dbxref=NCBI_GP:EFD93368.1;Name=EFD93368.1;gbkey=CDS;locus_tag=HMPREF0889_0791;product=hypothetical protein;protein_id=EFD93368.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 131168 133597 . + . ID=gene-HMPREF0889_0792;Name=HMPREF0889_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0792 GCA_000177555.1|ADGP01000033.1 Genbank CDS 131168 133597 . + 0 ID=cds-EFD93369.1;Parent=gene-HMPREF0889_0792;Dbxref=NCBI_GP:EFD93369.1;Name=EFD93369.1;gbkey=CDS;locus_tag=HMPREF0889_0792;product=hypothetical protein;protein_id=EFD93369.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 133601 135733 . + . ID=gene-HMPREF0889_0793;Name=HMPREF0889_0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0793 GCA_000177555.1|ADGP01000033.1 Genbank CDS 133601 135733 . + 0 ID=cds-EFD93370.1;Parent=gene-HMPREF0889_0793;Dbxref=NCBI_GP:EFD93370.1;Name=EFD93370.1;gbkey=CDS;locus_tag=HMPREF0889_0793;product=hypothetical protein;protein_id=EFD93370.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 135745 135984 . + . ID=gene-HMPREF0889_0794;Name=HMPREF0889_0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0794 GCA_000177555.1|ADGP01000033.1 Genbank CDS 135745 135984 . + 0 ID=cds-EFD93371.1;Parent=gene-HMPREF0889_0794;Dbxref=NCBI_GP:EFD93371.1;Name=EFD93371.1;gbkey=CDS;locus_tag=HMPREF0889_0794;product=hypothetical protein;protein_id=EFD93371.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 136115 137503 . + . ID=gene-HMPREF0889_0795;Name=HMPREF0889_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0795 GCA_000177555.1|ADGP01000033.1 Genbank CDS 136115 137503 . + 0 ID=cds-EFD93372.1;Parent=gene-HMPREF0889_0795;Dbxref=NCBI_GP:EFD93372.1;Name=EFD93372.1;gbkey=CDS;locus_tag=HMPREF0889_0795;product=hypothetical protein;protein_id=EFD93372.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 137598 139310 . + . ID=gene-HMPREF0889_0796;Name=HMPREF0889_0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0796 GCA_000177555.1|ADGP01000033.1 Genbank CDS 137598 139310 . + 0 ID=cds-EFD93373.1;Parent=gene-HMPREF0889_0796;Dbxref=NCBI_GP:EFD93373.1;Name=EFD93373.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751;gbkey=CDS;locus_tag=HMPREF0889_0796;product=DNA topoisomerase;protein_id=EFD93373.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 139392 140915 . + . ID=gene-HMPREF0889_0797;Name=HMPREF0889_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0797 GCA_000177555.1|ADGP01000033.1 Genbank CDS 139392 140915 . + 0 ID=cds-EFD93374.1;Parent=gene-HMPREF0889_0797;Dbxref=NCBI_GP:EFD93374.1;Name=EFD93374.1;Note=identified by match to protein family HMM PF04326;gbkey=CDS;locus_tag=HMPREF0889_0797;product=divergent AAA domain protein;protein_id=EFD93374.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 140999 149716 . + . ID=gene-HMPREF0889_0798;Name=HMPREF0889_0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0798 GCA_000177555.1|ADGP01000033.1 Genbank CDS 140999 149716 . + 0 ID=cds-EFD93375.1;Parent=gene-HMPREF0889_0798;Dbxref=NCBI_GP:EFD93375.1;Name=EFD93375.1;Note=identified by match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF0889_0798;product=helicase C-terminal domain protein;protein_id=EFD93375.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 149759 150418 . + . ID=gene-HMPREF0889_0799;Name=HMPREF0889_0799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0799 GCA_000177555.1|ADGP01000033.1 Genbank CDS 149759 150418 . + 0 ID=cds-EFD93376.1;Parent=gene-HMPREF0889_0799;Dbxref=NCBI_GP:EFD93376.1;Name=EFD93376.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00436;gbkey=CDS;locus_tag=HMPREF0889_0799;product=single-strand binding family protein;protein_id=EFD93376.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 150488 151819 . - . ID=gene-HMPREF0889_0800;Name=HMPREF0889_0800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0800 GCA_000177555.1|ADGP01000033.1 Genbank CDS 150488 151819 . - 0 ID=cds-EFD93377.1;Parent=gene-HMPREF0889_0800;Dbxref=NCBI_GP:EFD93377.1;Name=EFD93377.1;Note=identified by match to protein family HMM PF03432;gbkey=CDS;locus_tag=HMPREF0889_0800;product=relaxase/mobilization nuclease domain protein;protein_id=EFD93377.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 151822 152178 . - . ID=gene-HMPREF0889_0801;Name=HMPREF0889_0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0801 GCA_000177555.1|ADGP01000033.1 Genbank CDS 151822 152178 . - 0 ID=cds-EFD93378.1;Parent=gene-HMPREF0889_0801;Dbxref=NCBI_GP:EFD93378.1;Name=EFD93378.1;gbkey=CDS;locus_tag=HMPREF0889_0801;product=hypothetical protein;protein_id=EFD93378.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 152469 153122 . + . ID=gene-HMPREF0889_0802;Name=HMPREF0889_0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0802 GCA_000177555.1|ADGP01000033.1 Genbank CDS 152469 153122 . + 0 ID=cds-EFD93379.1;Parent=gene-HMPREF0889_0802;Dbxref=NCBI_GP:EFD93379.1;Name=EFD93379.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF0889_0802;product=transcriptional regulator%2C TetR family;protein_id=EFD93379.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 153216 154961 . + . ID=gene-HMPREF0889_0803;Name=HMPREF0889_0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0803 GCA_000177555.1|ADGP01000033.1 Genbank CDS 153216 154961 . + 0 ID=cds-EFD93380.1;Parent=gene-HMPREF0889_0803;Dbxref=NCBI_GP:EFD93380.1;Name=EFD93380.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF0889_0803;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93380.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 154955 156688 . + . ID=gene-HMPREF0889_0804;Name=HMPREF0889_0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0804 GCA_000177555.1|ADGP01000033.1 Genbank CDS 154955 156688 . + 0 ID=cds-EFD93381.1;Parent=gene-HMPREF0889_0804;Dbxref=NCBI_GP:EFD93381.1;Name=EFD93381.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0804;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93381.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 156769 157350 . + . ID=gene-HMPREF0889_0805;Name=HMPREF0889_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0805 GCA_000177555.1|ADGP01000033.1 Genbank CDS 156769 157350 . + 0 ID=cds-EFD93382.1;Parent=gene-HMPREF0889_0805;Dbxref=NCBI_GP:EFD93382.1;Name=EFD93382.1;Note=identified by match to protein family HMM PF09605%3B match to protein family HMM TIGR02185;gbkey=CDS;locus_tag=HMPREF0889_0805;product=conserved hypothetical protein TIGR02185;protein_id=EFD93382.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 157350 158084 . + . ID=gene-HMPREF0889_0806;Name=HMPREF0889_0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0806 GCA_000177555.1|ADGP01000033.1 Genbank CDS 157350 158084 . + 0 ID=cds-EFD93383.1;Parent=gene-HMPREF0889_0806;Dbxref=NCBI_GP:EFD93383.1;Name=EFD93383.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF0889_0806;product=cobalt transport protein;protein_id=EFD93383.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 158087 159562 . + . ID=gene-HMPREF0889_0807;Name=HMPREF0889_0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0807 GCA_000177555.1|ADGP01000033.1 Genbank CDS 158087 159562 . + 0 ID=cds-EFD93384.1;Parent=gene-HMPREF0889_0807;Dbxref=NCBI_GP:EFD93384.1;Name=EFD93384.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF02463;gbkey=CDS;locus_tag=HMPREF0889_0807;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93384.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 159594 160319 . + . ID=gene-HMPREF0889_0808;Name=HMPREF0889_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0808 GCA_000177555.1|ADGP01000033.1 Genbank CDS 159594 160319 . + 0 ID=cds-EFD93385.1;Parent=gene-HMPREF0889_0808;Dbxref=NCBI_GP:EFD93385.1;Name=EFD93385.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01554;gbkey=CDS;locus_tag=HMPREF0889_0808;product=MATE domain protein;protein_id=EFD93385.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 160307 160945 . + . ID=gene-HMPREF0889_0809;Name=HMPREF0889_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0809 GCA_000177555.1|ADGP01000033.1 Genbank CDS 160307 160945 . + 0 ID=cds-EFD93386.1;Parent=gene-HMPREF0889_0809;Dbxref=NCBI_GP:EFD93386.1;Name=EFD93386.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01554;gbkey=CDS;locus_tag=HMPREF0889_0809;product=MATE domain protein;protein_id=EFD93386.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 161261 161677 . + . ID=gene-HMPREF0889_0810;Name=HMPREF0889_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0810 GCA_000177555.1|ADGP01000033.1 Genbank CDS 161261 161677 . + 0 ID=cds-EFD93387.1;Parent=gene-HMPREF0889_0810;Dbxref=NCBI_GP:EFD93387.1;Name=EFD93387.1;gbkey=CDS;locus_tag=HMPREF0889_0810;product=hypothetical protein;protein_id=EFD93387.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 162170 162367 . + . ID=gene-HMPREF0889_0811;Name=HMPREF0889_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0811 GCA_000177555.1|ADGP01000033.1 Genbank CDS 162170 162367 . + 0 ID=cds-EFD93388.1;Parent=gene-HMPREF0889_0811;Dbxref=NCBI_GP:EFD93388.1;Name=EFD93388.1;gbkey=CDS;locus_tag=HMPREF0889_0811;product=hypothetical protein;protein_id=EFD93388.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 162449 162625 . + . ID=gene-HMPREF0889_0812;Name=HMPREF0889_0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0812 GCA_000177555.1|ADGP01000033.1 Genbank CDS 162449 162625 . + 0 ID=cds-EFD93389.1;Parent=gene-HMPREF0889_0812;Dbxref=NCBI_GP:EFD93389.1;Name=EFD93389.1;gbkey=CDS;locus_tag=HMPREF0889_0812;product=hypothetical protein;protein_id=EFD93389.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 162671 163906 . + . ID=gene-HMPREF0889_0813;Name=HMPREF0889_0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0813 GCA_000177555.1|ADGP01000033.1 Genbank CDS 162671 163906 . + 0 ID=cds-EFD93390.1;Parent=gene-HMPREF0889_0813;Dbxref=NCBI_GP:EFD93390.1;Name=EFD93390.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF0889_0813;product=site-specific recombinase%2C phage integrase family;protein_id=EFD93390.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 164401 165687 . + . ID=gene-HMPREF0889_0814;Name=HMPREF0889_0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0814 GCA_000177555.1|ADGP01000033.1 Genbank CDS 164401 165687 . + 0 ID=cds-EFD93391.1;Parent=gene-HMPREF0889_0814;Dbxref=NCBI_GP:EFD93391.1;Name=EFD93391.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0814;product=hypothetical protein;protein_id=EFD93391.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 165778 166245 . + . ID=gene-HMPREF0889_0815;Name=HMPREF0889_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0815 GCA_000177555.1|ADGP01000033.1 Genbank CDS 165778 166245 . + 0 ID=cds-EFD93392.1;Parent=gene-HMPREF0889_0815;Dbxref=NCBI_GP:EFD93392.1;Name=EFD93392.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0815;product=hypothetical protein;protein_id=EFD93392.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 166714 170007 . + . ID=gene-HMPREF0889_0816;Name=HMPREF0889_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0816 GCA_000177555.1|ADGP01000033.1 Genbank CDS 166714 170007 . + 0 ID=cds-EFD93393.1;Parent=gene-HMPREF0889_0816;Dbxref=NCBI_GP:EFD93393.1;Name=EFD93393.1;Note=identified by match to protein family HMM PF01391%3B match to protein family HMM PF05658;gbkey=CDS;locus_tag=HMPREF0889_0816;product=Hep/Hag repeat protein;protein_id=EFD93393.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 170281 171699 . + . ID=gene-HMPREF0889_0817;Name=HMPREF0889_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0817 GCA_000177555.1|ADGP01000033.1 Genbank CDS 170281 171699 . + 0 ID=cds-EFD93394.1;Parent=gene-HMPREF0889_0817;Dbxref=NCBI_GP:EFD93394.1;Name=EFD93394.1;gbkey=CDS;locus_tag=HMPREF0889_0817;product=outer membrane autotransporter barrel domain protein;protein_id=EFD93394.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 171751 173154 . + . ID=gene-HMPREF0889_0818;Name=HMPREF0889_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0818 GCA_000177555.1|ADGP01000033.1 Genbank CDS 171751 173154 . + 0 ID=cds-EFD93395.1;Parent=gene-HMPREF0889_0818;Dbxref=NCBI_GP:EFD93395.1;Name=EFD93395.1;gbkey=CDS;locus_tag=HMPREF0889_0818;product=outer membrane autotransporter barrel domain protein;protein_id=EFD93395.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 173342 174775 . + . ID=gene-HMPREF0889_0819;Name=HMPREF0889_0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0819 GCA_000177555.1|ADGP01000033.1 Genbank CDS 173342 174775 . + 0 ID=cds-EFD93396.1;Parent=gene-HMPREF0889_0819;Dbxref=NCBI_GP:EFD93396.1;Name=EFD93396.1;Note=identified by match to protein family HMM PF01814%3B match to protein family HMM PF04282%3B match to protein family HMM PF08984;gbkey=CDS;locus_tag=HMPREF0889_0819;product=hemerythrin HHE cation binding domain protein;protein_id=EFD93396.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 174910 175884 . + . ID=gene-HMPREF0889_0820;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=HMPREF0889_0820 GCA_000177555.1|ADGP01000033.1 Genbank CDS 174910 175884 . + 0 ID=cds-EFD93397.1;Parent=gene-HMPREF0889_0820;Dbxref=NCBI_GP:EFD93397.1;Name=EFD93397.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01379;gbkey=CDS;gene=thiL;locus_tag=HMPREF0889_0820;product=thiamine-phosphate kinase;protein_id=EFD93397.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 175895 176362 . + . ID=gene-HMPREF0889_0821;Name=HMPREF0889_0821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0821 GCA_000177555.1|ADGP01000033.1 Genbank CDS 175895 176362 . + 0 ID=cds-EFD93398.1;Parent=gene-HMPREF0889_0821;Dbxref=NCBI_GP:EFD93398.1;Name=EFD93398.1;Note=identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;locus_tag=HMPREF0889_0821;product=hydrolase%2C P-loop family;protein_id=EFD93398.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 176346 177047 . + . ID=gene-HMPREF0889_0822;Name=yeaZ;gbkey=Gene;gene=yeaZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0822 GCA_000177555.1|ADGP01000033.1 Genbank CDS 176346 177047 . + 0 ID=cds-EFD93399.1;Parent=gene-HMPREF0889_0822;Dbxref=NCBI_GP:EFD93399.1;Name=EFD93399.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725;gbkey=CDS;gene=yeaZ;locus_tag=HMPREF0889_0822;product=universal bacterial protein YeaZ;protein_id=EFD93399.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 177044 177505 . + . ID=gene-HMPREF0889_0823;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=HMPREF0889_0823 GCA_000177555.1|ADGP01000033.1 Genbank CDS 177044 177505 . + 0 ID=cds-EFD93400.1;Parent=gene-HMPREF0889_0823;Dbxref=NCBI_GP:EFD93400.1;Name=EFD93400.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575;gbkey=CDS;gene=rimI;locus_tag=HMPREF0889_0823;product=ribosomal-protein-alanine acetyltransferase;protein_id=EFD93400.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 177524 178549 . + . ID=gene-HMPREF0889_0824;Name=HMPREF0889_0824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0824 GCA_000177555.1|ADGP01000033.1 Genbank CDS 177524 178549 . + 0 ID=cds-EFD93401.1;Parent=gene-HMPREF0889_0824;Dbxref=NCBI_GP:EFD93401.1;Name=EFD93401.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723;gbkey=CDS;locus_tag=HMPREF0889_0824;product=putative glycoprotease GCP;protein_id=EFD93401.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 178571 180016 . + . ID=gene-HMPREF0889_0825;Name=HMPREF0889_0825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0825 GCA_000177555.1|ADGP01000033.1 Genbank CDS 178571 180016 . + 0 ID=cds-EFD93402.1;Parent=gene-HMPREF0889_0825;Dbxref=NCBI_GP:EFD93402.1;Name=EFD93402.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF07568;gbkey=CDS;locus_tag=HMPREF0889_0825;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFD93402.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 179991 180572 . + . ID=gene-HMPREF0889_0826;Name=HMPREF0889_0826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0826 GCA_000177555.1|ADGP01000033.1 Genbank CDS 179991 180572 . + 0 ID=cds-EFD93403.1;Parent=gene-HMPREF0889_0826;Dbxref=NCBI_GP:EFD93403.1;Name=EFD93403.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF03861;gbkey=CDS;locus_tag=HMPREF0889_0826;product=response regulator receiver domain protein;protein_id=EFD93403.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 180700 180981 . + . ID=gene-HMPREF0889_0827;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0827 GCA_000177555.1|ADGP01000033.1 Genbank CDS 180700 180981 . + 0 ID=cds-EFD93404.1;Parent=gene-HMPREF0889_0827;Dbxref=NCBI_GP:EFD93404.1;Name=EFD93404.1;Note=identified by match to protein family HMM PF00166;gbkey=CDS;gene=groS;locus_tag=HMPREF0889_0827;product=chaperonin GroS;protein_id=EFD93404.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 181020 182651 . + . ID=gene-HMPREF0889_0828;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=HMPREF0889_0828 GCA_000177555.1|ADGP01000033.1 Genbank CDS 181020 182651 . + 0 ID=cds-EFD93405.1;Parent=gene-HMPREF0889_0828;Dbxref=NCBI_GP:EFD93405.1;Name=EFD93405.1;Note=identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348;gbkey=CDS;gene=groL;locus_tag=HMPREF0889_0828;product=chaperonin GroL;protein_id=EFD93405.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 182817 183023 . + . ID=gene-HMPREF0889_0829;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0829 GCA_000177555.1|ADGP01000033.1 Genbank CDS 182817 183023 . + 0 ID=cds-EFD93406.1;Parent=gene-HMPREF0889_0829;Dbxref=NCBI_GP:EFD93406.1;Name=EFD93406.1;Note=identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105;gbkey=CDS;gene=rpmE;locus_tag=HMPREF0889_0829;product=ribosomal protein L31;protein_id=EFD93406.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 183098 183979 . + . ID=gene-HMPREF0889_0830;Name=HMPREF0889_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0830 GCA_000177555.1|ADGP01000033.1 Genbank CDS 183098 183979 . + 0 ID=cds-EFD93407.1;Parent=gene-HMPREF0889_0830;Dbxref=NCBI_GP:EFD93407.1;Name=EFD93407.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0830;product=hypothetical protein;protein_id=EFD93407.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 183997 185079 . + . ID=gene-HMPREF0889_0831;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0831 GCA_000177555.1|ADGP01000033.1 Genbank CDS 183997 185079 . + 0 ID=cds-EFD93408.1;Parent=gene-HMPREF0889_0831;Dbxref=NCBI_GP:EFD93408.1;Name=EFD93408.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019;gbkey=CDS;gene=prfA;locus_tag=HMPREF0889_0831;product=peptide chain release factor 1;protein_id=EFD93408.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 185072 185944 . + . ID=gene-HMPREF0889_0832;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0832 GCA_000177555.1|ADGP01000033.1 Genbank CDS 185072 185944 . + 0 ID=cds-EFD93409.1;Parent=gene-HMPREF0889_0832;Dbxref=NCBI_GP:EFD93409.1;Name=EFD93409.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534;gbkey=CDS;gene=prmC;locus_tag=HMPREF0889_0832;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=EFD93409.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 185934 186980 . + . ID=gene-HMPREF0889_0833;Name=HMPREF0889_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0833 GCA_000177555.1|ADGP01000033.1 Genbank CDS 185934 186980 . + 0 ID=cds-EFD93410.1;Parent=gene-HMPREF0889_0833;Dbxref=NCBI_GP:EFD93410.1;Name=EFD93410.1;Note=identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057;gbkey=CDS;locus_tag=HMPREF0889_0833;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=EFD93410.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 187025 187465 . + . ID=gene-HMPREF0889_0834;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0834 GCA_000177555.1|ADGP01000033.1 Genbank CDS 187025 187465 . + 0 ID=cds-EFD93411.1;Parent=gene-HMPREF0889_0834;Dbxref=NCBI_GP:EFD93411.1;Name=EFD93411.1;Note=identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120;gbkey=CDS;gene=rpiB;locus_tag=HMPREF0889_0834;product=ribose-5-phosphate isomerase B;protein_id=EFD93411.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 187481 188104 . + . ID=gene-HMPREF0889_0835;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF0889_0835 GCA_000177555.1|ADGP01000033.1 Genbank CDS 187481 188104 . + 0 ID=cds-EFD93412.1;Parent=gene-HMPREF0889_0835;Dbxref=NCBI_GP:EFD93412.1;Name=EFD93412.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091;gbkey=CDS;gene=upp;locus_tag=HMPREF0889_0835;product=uracil phosphoribosyltransferase;protein_id=EFD93412.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 188273 189913 . + . ID=gene-HMPREF0889_0836;Name=HMPREF0889_0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0836 GCA_000177555.1|ADGP01000033.1 Genbank CDS 188273 189913 . + 0 ID=cds-EFD93413.1;Parent=gene-HMPREF0889_0836;Dbxref=NCBI_GP:EFD93413.1;Name=EFD93413.1;Note=identified by match to protein family HMM PF00485;gbkey=CDS;locus_tag=HMPREF0889_0836;product=phosphoribulokinase/uridine kinase family protein;protein_id=EFD93413.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 190151 191371 . + . ID=gene-HMPREF0889_0837;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0837 GCA_000177555.1|ADGP01000033.1 Genbank CDS 190151 191371 . + 0 ID=cds-EFD93414.1;Parent=gene-HMPREF0889_0837;Dbxref=NCBI_GP:EFD93414.1;Name=EFD93414.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR01127;gbkey=CDS;gene=ilvA;locus_tag=HMPREF0889_0837;product=threonine ammonia-lyase;protein_id=EFD93414.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 191394 192800 . + . ID=gene-HMPREF0889_0838;Name=HMPREF0889_0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0838 GCA_000177555.1|ADGP01000033.1 Genbank CDS 191394 192800 . + 0 ID=cds-EFD93415.1;Parent=gene-HMPREF0889_0838;Dbxref=NCBI_GP:EFD93415.1;Name=EFD93415.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF0889_0838;product=amino acid permease;protein_id=EFD93415.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 193005 194567 . - . ID=gene-HMPREF0889_0839;Name=HMPREF0889_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0839 GCA_000177555.1|ADGP01000033.1 Genbank CDS 193005 194567 . - 0 ID=cds-EFD93416.1;Parent=gene-HMPREF0889_0839;Dbxref=NCBI_GP:EFD93416.1;Name=EFD93416.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023;gbkey=CDS;locus_tag=HMPREF0889_0839;product=putative stage V sporulation protein B;protein_id=EFD93416.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 194960 195436 . + . ID=gene-HMPREF0889_0840;Name=HMPREF0889_0840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0840 GCA_000177555.1|ADGP01000033.1 Genbank CDS 194960 195436 . + 0 ID=cds-EFD93417.1;Parent=gene-HMPREF0889_0840;Dbxref=NCBI_GP:EFD93417.1;Name=EFD93417.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=HMPREF0889_0840;product=transcriptional regulator%2C MarR family;protein_id=EFD93417.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 195423 196514 . + . ID=gene-HMPREF0889_0841;Name=HMPREF0889_0841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0841 GCA_000177555.1|ADGP01000033.1 Genbank CDS 195423 196514 . + 0 ID=cds-EFD93418.1;Parent=gene-HMPREF0889_0841;Dbxref=NCBI_GP:EFD93418.1;Name=EFD93418.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF0889_0841;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFD93418.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 196511 199558 . + . ID=gene-HMPREF0889_0842;Name=HMPREF0889_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0842 GCA_000177555.1|ADGP01000033.1 Genbank CDS 196511 199558 . + 0 ID=cds-EFD93419.1;Parent=gene-HMPREF0889_0842;Dbxref=NCBI_GP:EFD93419.1;Name=EFD93419.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;locus_tag=HMPREF0889_0842;product=RND transporter%2C HAE1/HME family%2C permease protein;protein_id=EFD93419.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 199660 201207 . + . ID=gene-HMPREF0889_0843;Name=HMPREF0889_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0843 GCA_000177555.1|ADGP01000033.1 Genbank CDS 199660 201207 . + 0 ID=cds-EFD93420.1;Parent=gene-HMPREF0889_0843;Dbxref=NCBI_GP:EFD93420.1;Name=EFD93420.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;locus_tag=HMPREF0889_0843;product=carbohydrate kinase%2C FGGY family protein;protein_id=EFD93420.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 201240 201410 . + . ID=gene-HMPREF0889_0844;Name=HMPREF0889_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0844 GCA_000177555.1|ADGP01000033.1 Genbank CDS 201240 201410 . + 0 ID=cds-EFD93421.1;Parent=gene-HMPREF0889_0844;Dbxref=NCBI_GP:EFD93421.1;Name=EFD93421.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0844;product=hypothetical protein;protein_id=EFD93421.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 201451 202311 . + . ID=gene-HMPREF0889_0845;Name=hbd;gbkey=Gene;gene=hbd;gene_biotype=protein_coding;locus_tag=HMPREF0889_0845 GCA_000177555.1|ADGP01000033.1 Genbank CDS 201451 202311 . + 0 ID=cds-EFD93422.1;Parent=gene-HMPREF0889_0845;Dbxref=NCBI_GP:EFD93422.1;Name=EFD93422.1;Note=identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737;gbkey=CDS;gene=hbd;locus_tag=HMPREF0889_0845;product=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain protein;protein_id=EFD93422.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 202375 203157 . + . ID=gene-HMPREF0889_0846;Name=crt;gbkey=Gene;gene=crt;gene_biotype=protein_coding;locus_tag=HMPREF0889_0846 GCA_000177555.1|ADGP01000033.1 Genbank CDS 202375 203157 . + 0 ID=cds-EFD93423.1;Parent=gene-HMPREF0889_0846;Dbxref=NCBI_GP:EFD93423.1;Name=EFD93423.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;gene=crt;locus_tag=HMPREF0889_0846;product=3-hydroxybutyryl-CoA dehydratase;protein_id=EFD93423.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 203269 204372 . - . ID=gene-HMPREF0889_0847;Name=HMPREF0889_0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0847 GCA_000177555.1|ADGP01000033.1 Genbank CDS 203269 204372 . - 0 ID=cds-EFD93424.1;Parent=gene-HMPREF0889_0847;Dbxref=NCBI_GP:EFD93424.1;Name=EFD93424.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;locus_tag=HMPREF0889_0847;product=acyltransferase;protein_id=EFD93424.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 204499 205014 . + . ID=gene-HMPREF0889_0848;Name=HMPREF0889_0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0848 GCA_000177555.1|ADGP01000033.1 Genbank CDS 204499 205014 . + 0 ID=cds-EFD93425.1;Parent=gene-HMPREF0889_0848;Dbxref=NCBI_GP:EFD93425.1;Name=EFD93425.1;gbkey=CDS;locus_tag=HMPREF0889_0848;product=hypothetical protein;protein_id=EFD93425.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 205031 205429 . + . ID=gene-HMPREF0889_0849;Name=HMPREF0889_0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0849 GCA_000177555.1|ADGP01000033.1 Genbank CDS 205031 205429 . + 0 ID=cds-EFD93426.1;Parent=gene-HMPREF0889_0849;Dbxref=NCBI_GP:EFD93426.1;Name=EFD93426.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0849;product=hypothetical protein;protein_id=EFD93426.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 205448 206047 . + . ID=gene-HMPREF0889_0850;Name=HMPREF0889_0850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0850 GCA_000177555.1|ADGP01000033.1 Genbank CDS 205448 206047 . + 0 ID=cds-EFD93427.1;Parent=gene-HMPREF0889_0850;Dbxref=NCBI_GP:EFD93427.1;Name=EFD93427.1;Note=identified by match to protein family HMM PF01227;gbkey=CDS;locus_tag=HMPREF0889_0850;product=putative GTP cyclohydrolase I;protein_id=EFD93427.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 206037 206885 . + . ID=gene-HMPREF0889_0851;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0851 GCA_000177555.1|ADGP01000033.1 Genbank CDS 206037 206885 . + 0 ID=cds-EFD93428.1;Parent=gene-HMPREF0889_0851;Dbxref=NCBI_GP:EFD93428.1;Name=EFD93428.1;Note=identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496;gbkey=CDS;gene=folP;locus_tag=HMPREF0889_0851;product=dihydropteroate synthase;protein_id=EFD93428.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 206885 207247 . + . ID=gene-HMPREF0889_0852;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0852 GCA_000177555.1|ADGP01000033.1 Genbank CDS 206885 207247 . + 0 ID=cds-EFD93429.1;Parent=gene-HMPREF0889_0852;Dbxref=NCBI_GP:EFD93429.1;Name=EFD93429.1;Note=identified by match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526;gbkey=CDS;gene=folB;locus_tag=HMPREF0889_0852;product=dihydroneopterin aldolase;protein_id=EFD93429.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 207240 207743 . + . ID=gene-HMPREF0889_0853;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0853 GCA_000177555.1|ADGP01000033.1 Genbank CDS 207240 207743 . + 0 ID=cds-EFD93430.1;Parent=gene-HMPREF0889_0853;Dbxref=NCBI_GP:EFD93430.1;Name=EFD93430.1;Note=identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498;gbkey=CDS;gene=folK;locus_tag=HMPREF0889_0853;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=EFD93430.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 207728 208387 . + . ID=gene-HMPREF0889_0854;Name=HMPREF0889_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0854 GCA_000177555.1|ADGP01000033.1 Genbank CDS 207728 208387 . + 0 ID=cds-EFD93431.1;Parent=gene-HMPREF0889_0854;Dbxref=NCBI_GP:EFD93431.1;Name=EFD93431.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF0889_0854;product=response regulator receiver domain protein;protein_id=EFD93431.1;transl_table=11 GCA_000177555.1|ADGP01000033.1 Genbank gene 208485 209300 . + . ID=gene-HMPREF0889_0855;Name=HMPREF0889_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0855 GCA_000177555.1|ADGP01000033.1 Genbank CDS 208485 209300 . + 0 ID=cds-EFD93432.1;Parent=gene-HMPREF0889_0855;Dbxref=NCBI_GP:EFD93432.1;Name=EFD93432.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF0889_0855;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFD93432.1;transl_table=11 ##sequence-region ADGP01000032.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000032.1 Genbank region 1 534 . + . ID=ADGP01000032.1:1..534;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000032.1 Genbank gene 1 534 . - . ID=gene-HMPREF0889_1691;Name=HMPREF0889_1691;end_range=534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1691;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000032.1 Genbank CDS 1 534 . - 2 ID=cds-EFD93433.1;Parent=gene-HMPREF0889_1691;Dbxref=NCBI_GP:EFD93433.1;Name=EFD93433.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=534,.;gbkey=CDS;locus_tag=HMPREF0889_1691;partial=true;product=hypothetical protein;protein_id=EFD93433.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000031.1 1 1653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000031.1 Genbank region 1 1653 . + . ID=ADGP01000031.1:1..1653;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000031.1 Genbank gene 68 1653 . + . ID=gene-HMPREF0889_0101;Name=HMPREF0889_0101;end_range=1653,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0101;partial=true GCA_000177555.1|ADGP01000031.1 Genbank CDS 68 1653 . + 0 ID=cds-EFD93434.1;Parent=gene-HMPREF0889_0101;Dbxref=NCBI_GP:EFD93434.1;Name=EFD93434.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;end_range=1653,.;gbkey=CDS;locus_tag=HMPREF0889_0101;partial=true;product=hypothetical protein;protein_id=EFD93434.1;transl_table=11 ##sequence-region ADGP01000030.1 1 11788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000030.1 Genbank region 1 11788 . + . ID=ADGP01000030.1:1..11788;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000030.1 Genbank gene 270 1049 . + . ID=gene-HMPREF0889_0122;Name=HMPREF0889_0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0122 GCA_000177555.1|ADGP01000030.1 Genbank CDS 270 1049 . + 0 ID=cds-EFD93435.1;Parent=gene-HMPREF0889_0122;Dbxref=NCBI_GP:EFD93435.1;Name=EFD93435.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF0889_0122;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFD93435.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 1049 1693 . + . ID=gene-HMPREF0889_0123;Name=HMPREF0889_0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0123 GCA_000177555.1|ADGP01000030.1 Genbank CDS 1049 1693 . + 0 ID=cds-EFD93436.1;Parent=gene-HMPREF0889_0123;Dbxref=NCBI_GP:EFD93436.1;Name=EFD93436.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;locus_tag=HMPREF0889_0123;product=haloacid dehalogenase-like hydrolase;protein_id=EFD93436.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 1784 3016 . - . ID=gene-HMPREF0889_0124;Name=HMPREF0889_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0124 GCA_000177555.1|ADGP01000030.1 Genbank CDS 1784 3016 . - 0 ID=cds-EFD93437.1;Parent=gene-HMPREF0889_0124;Dbxref=NCBI_GP:EFD93437.1;Name=EFD93437.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0124;product=hypothetical protein;protein_id=EFD93437.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 3003 3938 . - . ID=gene-HMPREF0889_0125;Name=HMPREF0889_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0125 GCA_000177555.1|ADGP01000030.1 Genbank CDS 3003 3938 . - 0 ID=cds-EFD93438.1;Parent=gene-HMPREF0889_0125;Dbxref=NCBI_GP:EFD93438.1;Name=EFD93438.1;Note=identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647;gbkey=CDS;locus_tag=HMPREF0889_0125;product=hypothetical protein;protein_id=EFD93438.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 3948 5294 . - . ID=gene-HMPREF0889_0126;Name=HMPREF0889_0126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0126 GCA_000177555.1|ADGP01000030.1 Genbank CDS 3948 5294 . - 0 ID=cds-EFD93439.1;Parent=gene-HMPREF0889_0126;Dbxref=NCBI_GP:EFD93439.1;Name=EFD93439.1;Note=identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826;gbkey=CDS;locus_tag=HMPREF0889_0126;product=hypothetical protein;protein_id=EFD93439.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 5310 6212 . - . ID=gene-HMPREF0889_0127;Name=HMPREF0889_0127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0127 GCA_000177555.1|ADGP01000030.1 Genbank CDS 5310 6212 . - 0 ID=cds-EFD93440.1;Parent=gene-HMPREF0889_0127;Dbxref=NCBI_GP:EFD93440.1;Name=EFD93440.1;Note=identified by match to protein family HMM PF03668;gbkey=CDS;locus_tag=HMPREF0889_0127;product=hypothetical protein;protein_id=EFD93440.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 6224 7033 . - . ID=gene-HMPREF0889_0128;Name=HMPREF0889_0128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0128 GCA_000177555.1|ADGP01000030.1 Genbank CDS 6224 7033 . - 0 ID=cds-EFD93441.1;Parent=gene-HMPREF0889_0128;Dbxref=NCBI_GP:EFD93441.1;Name=EFD93441.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=HMPREF0889_0128;product=Cof-like hydrolase;protein_id=EFD93441.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 7030 7392 . - . ID=gene-HMPREF0889_0129;Name=HMPREF0889_0129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0129 GCA_000177555.1|ADGP01000030.1 Genbank CDS 7030 7392 . - 0 ID=cds-EFD93442.1;Parent=gene-HMPREF0889_0129;Dbxref=NCBI_GP:EFD93442.1;Name=EFD93442.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0129;product=hypothetical protein;protein_id=EFD93442.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 7470 7976 . - . ID=gene-HMPREF0889_0130;Name=HMPREF0889_0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0130 GCA_000177555.1|ADGP01000030.1 Genbank CDS 7470 7976 . - 0 ID=cds-EFD93443.1;Parent=gene-HMPREF0889_0130;Dbxref=NCBI_GP:EFD93443.1;Name=EFD93443.1;Note=identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544;gbkey=CDS;locus_tag=HMPREF0889_0130;product=DivIVA domain protein;protein_id=EFD93443.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 8023 8808 . - . ID=gene-HMPREF0889_0131;Name=HMPREF0889_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0131 GCA_000177555.1|ADGP01000030.1 Genbank CDS 8023 8808 . - 0 ID=cds-EFD93444.1;Parent=gene-HMPREF0889_0131;Dbxref=NCBI_GP:EFD93444.1;Name=EFD93444.1;Note=identified by match to protein family HMM PF01479;gbkey=CDS;locus_tag=HMPREF0889_0131;product=S4 domain protein;protein_id=EFD93444.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 8818 9330 . - . ID=gene-HMPREF0889_0132;Name=HMPREF0889_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0132 GCA_000177555.1|ADGP01000030.1 Genbank CDS 8818 9330 . - 0 ID=cds-EFD93445.1;Parent=gene-HMPREF0889_0132;Dbxref=NCBI_GP:EFD93445.1;Name=EFD93445.1;Note=identified by match to protein family HMM PF04472;gbkey=CDS;locus_tag=HMPREF0889_0132;product=hypothetical protein;protein_id=EFD93445.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 9344 10027 . - . ID=gene-HMPREF0889_0133;Name=HMPREF0889_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0133 GCA_000177555.1|ADGP01000030.1 Genbank CDS 9344 10027 . - 0 ID=cds-EFD93446.1;Parent=gene-HMPREF0889_0133;Dbxref=NCBI_GP:EFD93446.1;Name=EFD93446.1;Note=identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044;gbkey=CDS;locus_tag=HMPREF0889_0133;product=pyridoxal phosphate enzyme%2C YggS family;protein_id=EFD93446.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 10152 11000 . - . ID=gene-HMPREF0889_0134;Name=HMPREF0889_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0134 GCA_000177555.1|ADGP01000030.1 Genbank CDS 10152 11000 . - 0 ID=cds-EFD93447.1;Parent=gene-HMPREF0889_0134;Dbxref=NCBI_GP:EFD93447.1;Name=EFD93447.1;Note=identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726;gbkey=CDS;locus_tag=HMPREF0889_0134;product=conserved hypothetical protein%2C YfiH family;protein_id=EFD93447.1;transl_table=11 GCA_000177555.1|ADGP01000030.1 Genbank gene 11078 11168 . - . ID=gene-HMPREF0889_0135;Name=HMPREF0889_0135;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0135 GCA_000177555.1|ADGP01000030.1 Genbank tRNA 11078 11168 . - . ID=rna-HMPREF0889_0135;Parent=gene-HMPREF0889_0135;gbkey=tRNA;locus_tag=HMPREF0889_0135;product=tRNA-Ser GCA_000177555.1|ADGP01000030.1 Genbank exon 11078 11168 . - . ID=exon-HMPREF0889_0135-1;Parent=rna-HMPREF0889_0135;gbkey=tRNA;locus_tag=HMPREF0889_0135;product=tRNA-Ser GCA_000177555.1|ADGP01000030.1 Genbank gene 11250 11788 . - . ID=gene-HMPREF0889_0137;Name=HMPREF0889_0137;end_range=11788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0137;partial=true GCA_000177555.1|ADGP01000030.1 Genbank CDS 11250 11788 . - 2 ID=cds-EFD93448.1;Parent=gene-HMPREF0889_0137;Dbxref=NCBI_GP:EFD93448.1;Name=EFD93448.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00665;end_range=11788,.;gbkey=CDS;locus_tag=HMPREF0889_0137;partial=true;product=integrase core domain protein;protein_id=EFD93448.1;transl_table=11 ##sequence-region ADGP01000029.1 1 901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000029.1 Genbank region 1 901 . + . ID=ADGP01000029.1:1..901;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000029.1 Genbank gene 1 901 . + . ID=gene-HMPREF0889_0497;Name=HMPREF0889_0497;end_range=901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0497;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000029.1 Genbank CDS 1 901 . + 2 ID=cds-EFD93449.1;Parent=gene-HMPREF0889_0497;Dbxref=NCBI_GP:EFD93449.1;Name=EFD93449.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=901,.;gbkey=CDS;locus_tag=HMPREF0889_0497;partial=true;product=hypothetical protein;protein_id=EFD93449.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000028.1 1 22210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000028.1 Genbank region 1 22210 . + . ID=ADGP01000028.1:1..22210;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000028.1 Genbank gene 15 1673 . + . ID=gene-HMPREF0889_0409;Name=HMPREF0889_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0409 GCA_000177555.1|ADGP01000028.1 Genbank CDS 15 1673 . + 0 ID=cds-EFD93450.1;Parent=gene-HMPREF0889_0409;Dbxref=NCBI_GP:EFD93450.1;Name=EFD93450.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_0409;product=Hep/Hag repeat protein;protein_id=EFD93450.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 1775 2452 . + . ID=gene-HMPREF0889_0410;Name=HMPREF0889_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0410 GCA_000177555.1|ADGP01000028.1 Genbank CDS 1775 2452 . + 0 ID=cds-EFD93451.1;Parent=gene-HMPREF0889_0410;Dbxref=NCBI_GP:EFD93451.1;Name=EFD93451.1;gbkey=CDS;locus_tag=HMPREF0889_0410;product=hypothetical protein;protein_id=EFD93451.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 2550 3452 . - . ID=gene-HMPREF0889_0411;Name=HMPREF0889_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0411 GCA_000177555.1|ADGP01000028.1 Genbank CDS 2550 3452 . - 0 ID=cds-EFD93452.1;Parent=gene-HMPREF0889_0411;Dbxref=NCBI_GP:EFD93452.1;Name=EFD93452.1;Note=identified by match to protein family HMM PF01557;gbkey=CDS;locus_tag=HMPREF0889_0411;product=FAH family protein;protein_id=EFD93452.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 3610 5283 . + . ID=gene-HMPREF0889_0412;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0412 GCA_000177555.1|ADGP01000028.1 Genbank CDS 3610 5283 . + 0 ID=cds-EFD93453.1;Parent=gene-HMPREF0889_0412;Dbxref=NCBI_GP:EFD93453.1;Name=EFD93453.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM PF03950%3B match to protein family HMM TIGR00440;gbkey=CDS;gene=glnS;locus_tag=HMPREF0889_0412;product=glutamine--tRNA ligase;protein_id=EFD93453.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 5424 5696 . + . ID=gene-HMPREF0889_0413;Name=HMPREF0889_0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0413 GCA_000177555.1|ADGP01000028.1 Genbank CDS 5424 5696 . + 0 ID=cds-EFD93454.1;Parent=gene-HMPREF0889_0413;Dbxref=NCBI_GP:EFD93454.1;Name=EFD93454.1;gbkey=CDS;locus_tag=HMPREF0889_0413;product=hypothetical protein;protein_id=EFD93454.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 5709 6269 . + . ID=gene-HMPREF0889_0414;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=HMPREF0889_0414 GCA_000177555.1|ADGP01000028.1 Genbank CDS 5709 6269 . + 0 ID=cds-EFD93455.1;Parent=gene-HMPREF0889_0414;Dbxref=NCBI_GP:EFD93455.1;Name=EFD93455.1;Note=identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172;gbkey=CDS;gene=maf;locus_tag=HMPREF0889_0414;product=septum formation protein Maf;protein_id=EFD93455.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 6266 6955 . + . ID=gene-HMPREF0889_0415;Name=HMPREF0889_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0415 GCA_000177555.1|ADGP01000028.1 Genbank CDS 6266 6955 . + 0 ID=cds-EFD93456.1;Parent=gene-HMPREF0889_0415;Dbxref=NCBI_GP:EFD93456.1;Name=EFD93456.1;Note=identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;locus_tag=HMPREF0889_0415;product=putative DNA repair protein RadC;protein_id=EFD93456.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 7115 8161 . + . ID=gene-HMPREF0889_0416;Name=HMPREF0889_0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0416 GCA_000177555.1|ADGP01000028.1 Genbank CDS 7115 8161 . + 0 ID=cds-EFD93457.1;Parent=gene-HMPREF0889_0416;Dbxref=NCBI_GP:EFD93457.1;Name=EFD93457.1;Note=identified by match to protein family HMM PF01070;gbkey=CDS;locus_tag=HMPREF0889_0416;product=dehydrogenase%2C FMN-dependent;protein_id=EFD93457.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 8491 9903 . + . ID=gene-HMPREF0889_0417;Name=HMPREF0889_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0417 GCA_000177555.1|ADGP01000028.1 Genbank CDS 8491 9903 . + 0 ID=cds-EFD93458.1;Parent=gene-HMPREF0889_0417;Dbxref=NCBI_GP:EFD93458.1;Name=EFD93458.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_0417;product=six-Cys-in-45 modification radical SAM protein;protein_id=EFD93458.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 9900 10097 . + . ID=gene-HMPREF0889_0418;Name=HMPREF0889_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0418 GCA_000177555.1|ADGP01000028.1 Genbank CDS 9900 10097 . + 0 ID=cds-EFD93459.1;Parent=gene-HMPREF0889_0418;Dbxref=NCBI_GP:EFD93459.1;Name=EFD93459.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0418;product=hypothetical protein;protein_id=EFD93459.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 10319 11065 . + . ID=gene-HMPREF0889_0419;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0419 GCA_000177555.1|ADGP01000028.1 Genbank CDS 10319 11065 . + 0 ID=cds-EFD93460.1;Parent=gene-HMPREF0889_0419;Dbxref=NCBI_GP:EFD93460.1;Name=EFD93460.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978;gbkey=CDS;gene=sufC;locus_tag=HMPREF0889_0419;product=FeS assembly ATPase SufC;protein_id=EFD93460.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 11080 12507 . + . ID=gene-HMPREF0889_0420;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0420 GCA_000177555.1|ADGP01000028.1 Genbank CDS 11080 12507 . + 0 ID=cds-EFD93461.1;Parent=gene-HMPREF0889_0420;Dbxref=NCBI_GP:EFD93461.1;Name=EFD93461.1;Note=identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980;gbkey=CDS;gene=sufB;locus_tag=HMPREF0889_0420;product=FeS assembly protein SufB;protein_id=EFD93461.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 12525 13622 . + . ID=gene-HMPREF0889_0421;Name=HMPREF0889_0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0421 GCA_000177555.1|ADGP01000028.1 Genbank CDS 12525 13622 . + 0 ID=cds-EFD93462.1;Parent=gene-HMPREF0889_0421;Dbxref=NCBI_GP:EFD93462.1;Name=EFD93462.1;Note=identified by match to protein family HMM PF01458;gbkey=CDS;locus_tag=HMPREF0889_0421;product=SufB/sufD domain protein;protein_id=EFD93462.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 13606 14835 . + . ID=gene-HMPREF0889_0422;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0422 GCA_000177555.1|ADGP01000028.1 Genbank CDS 13606 14835 . + 0 ID=cds-EFD93463.1;Parent=gene-HMPREF0889_0422;Dbxref=NCBI_GP:EFD93463.1;Name=EFD93463.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01979;gbkey=CDS;gene=sufS;locus_tag=HMPREF0889_0422;product=cysteine desulfurase%2C SufS subfamily;protein_id=EFD93463.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 14853 15287 . + . ID=gene-HMPREF0889_0423;Name=HMPREF0889_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0423 GCA_000177555.1|ADGP01000028.1 Genbank CDS 14853 15287 . + 0 ID=cds-EFD93464.1;Parent=gene-HMPREF0889_0423;Dbxref=NCBI_GP:EFD93464.1;Name=EFD93464.1;Note=identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994;gbkey=CDS;locus_tag=HMPREF0889_0423;product=SUF system FeS assembly protein%2C NifU family;protein_id=EFD93464.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 15681 17936 . + . ID=gene-HMPREF0889_0424;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0424 GCA_000177555.1|ADGP01000028.1 Genbank CDS 15681 17936 . + 0 ID=cds-EFD93465.1;Parent=gene-HMPREF0889_0424;Dbxref=NCBI_GP:EFD93465.1;Name=EFD93465.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=HMPREF0889_0424;product=formate C-acetyltransferase;protein_id=EFD93465.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 18022 18771 . + . ID=gene-HMPREF0889_0425;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0425 GCA_000177555.1|ADGP01000028.1 Genbank CDS 18022 18771 . + 0 ID=cds-EFD93466.1;Parent=gene-HMPREF0889_0425;Dbxref=NCBI_GP:EFD93466.1;Name=EFD93466.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF0889_0425;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EFD93466.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 18973 20427 . + . ID=gene-HMPREF0889_0426;Name=HMPREF0889_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0426 GCA_000177555.1|ADGP01000028.1 Genbank CDS 18973 20427 . + 0 ID=cds-EFD93467.1;Parent=gene-HMPREF0889_0426;Dbxref=NCBI_GP:EFD93467.1;Name=EFD93467.1;Note=identified by match to protein family HMM PF00883;gbkey=CDS;locus_tag=HMPREF0889_0426;product=cytosol aminopeptidase family%2C catalytic domain protein;protein_id=EFD93467.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 20417 21232 . + . ID=gene-HMPREF0889_0427;Name=HMPREF0889_0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0427 GCA_000177555.1|ADGP01000028.1 Genbank CDS 20417 21232 . + 0 ID=cds-EFD93468.1;Parent=gene-HMPREF0889_0427;Dbxref=NCBI_GP:EFD93468.1;Name=EFD93468.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;locus_tag=HMPREF0889_0427;product=PHP domain protein;protein_id=EFD93468.1;transl_table=11 GCA_000177555.1|ADGP01000028.1 Genbank gene 21229 22113 . + . ID=gene-HMPREF0889_0428;Name=HMPREF0889_0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0428 GCA_000177555.1|ADGP01000028.1 Genbank CDS 21229 22113 . + 0 ID=cds-EFD93469.1;Parent=gene-HMPREF0889_0428;Dbxref=NCBI_GP:EFD93469.1;Name=EFD93469.1;gbkey=CDS;locus_tag=HMPREF0889_0428;product=hypothetical protein;protein_id=EFD93469.1;transl_table=11 ##sequence-region ADGP01000027.1 1 5457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000027.1 Genbank region 1 5457 . + . ID=ADGP01000027.1:1..5457;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000027.1 Genbank gene 1 4513 . + . ID=gene-HMPREF0889_0138;Name=HMPREF0889_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0138;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000027.1 Genbank CDS 1 4513 . + 1 ID=cds-EFD93470.1;Parent=gene-HMPREF0889_0138;Dbxref=NCBI_GP:EFD93470.1;Name=EFD93470.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0138;partial=true;product=hypothetical protein;protein_id=EFD93470.1;start_range=.,1;transl_table=11 GCA_000177555.1|ADGP01000027.1 Genbank gene 4916 5457 . + . ID=gene-HMPREF0889_0139;Name=HMPREF0889_0139;end_range=5457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0139;partial=true GCA_000177555.1|ADGP01000027.1 Genbank CDS 4916 5457 . + 0 ID=cds-EFD93471.1;Parent=gene-HMPREF0889_0139;Dbxref=NCBI_GP:EFD93471.1;Name=EFD93471.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;end_range=5457,.;gbkey=CDS;locus_tag=HMPREF0889_0139;partial=true;product=hypothetical protein;protein_id=EFD93471.1;transl_table=11 ##sequence-region ADGP01000026.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000026.1 Genbank region 1 565 . + . ID=ADGP01000026.1:1..565;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000026.1 Genbank gene 1 565 . + . ID=gene-HMPREF0889_0100;Name=HMPREF0889_0100;end_range=565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0100;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000026.1 Genbank CDS 1 565 . + 1 ID=cds-EFD93472.1;Parent=gene-HMPREF0889_0100;Dbxref=NCBI_GP:EFD93472.1;Name=EFD93472.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=565,.;gbkey=CDS;locus_tag=HMPREF0889_0100;partial=true;product=hypothetical protein;protein_id=EFD93472.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000025.1 1 6193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000025.1 Genbank region 1 6193 . + . ID=ADGP01000025.1:1..6193;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000025.1 Genbank gene 72 155 . - . ID=gene-HMPREF0889_0115;Name=HMPREF0889_0115;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0115 GCA_000177555.1|ADGP01000025.1 Genbank tRNA 72 155 . - . ID=rna-HMPREF0889_0115;Parent=gene-HMPREF0889_0115;gbkey=tRNA;locus_tag=HMPREF0889_0115;product=tRNA-Leu GCA_000177555.1|ADGP01000025.1 Genbank exon 72 155 . - . ID=exon-HMPREF0889_0115-1;Parent=rna-HMPREF0889_0115;gbkey=tRNA;locus_tag=HMPREF0889_0115;product=tRNA-Leu GCA_000177555.1|ADGP01000025.1 Genbank gene 393 1346 . + . ID=gene-HMPREF0889_0116;Name=HMPREF0889_0116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0116 GCA_000177555.1|ADGP01000025.1 Genbank CDS 393 1346 . + 0 ID=cds-EFD93473.1;Parent=gene-HMPREF0889_0116;Dbxref=NCBI_GP:EFD93473.1;Name=EFD93473.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF0889_0116;product=putative L-lactate dehydrogenase;protein_id=EFD93473.1;transl_table=11 GCA_000177555.1|ADGP01000025.1 Genbank gene 1425 2870 . - . ID=gene-HMPREF0889_0117;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0117 GCA_000177555.1|ADGP01000025.1 Genbank CDS 1425 2870 . - 0 ID=cds-EFD93474.1;Parent=gene-HMPREF0889_0117;Dbxref=NCBI_GP:EFD93474.1;Name=EFD93474.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00324;gbkey=CDS;gene=lysP;locus_tag=HMPREF0889_0117;product=lysine-specific permease;protein_id=EFD93474.1;transl_table=11 GCA_000177555.1|ADGP01000025.1 Genbank gene 3068 3352 . + . ID=gene-HMPREF0889_0118;Name=HMPREF0889_0118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0118 GCA_000177555.1|ADGP01000025.1 Genbank CDS 3068 3352 . + 0 ID=cds-EFD93475.1;Parent=gene-HMPREF0889_0118;Dbxref=NCBI_GP:EFD93475.1;Name=EFD93475.1;Note=identified by match to protein family HMM PF01817%3B match to protein family HMM TIGR01805;gbkey=CDS;locus_tag=HMPREF0889_0118;product=chorismate mutase;protein_id=EFD93475.1;transl_table=11 GCA_000177555.1|ADGP01000025.1 Genbank gene 3337 5502 . + . ID=gene-HMPREF0889_0119;Name=HMPREF0889_0119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0119 GCA_000177555.1|ADGP01000025.1 Genbank CDS 3337 5502 . + 0 ID=cds-EFD93476.1;Parent=gene-HMPREF0889_0119;Dbxref=NCBI_GP:EFD93476.1;Name=EFD93476.1;Note=identified by match to protein family HMM TIGR01448;gbkey=CDS;locus_tag=HMPREF0889_0119;product=helicase%2C RecD/TraA family;protein_id=EFD93476.1;transl_table=11 GCA_000177555.1|ADGP01000025.1 Genbank gene 5493 6155 . + . ID=gene-HMPREF0889_0120;Name=HMPREF0889_0120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0120 GCA_000177555.1|ADGP01000025.1 Genbank CDS 5493 6155 . + 0 ID=cds-EFD93477.1;Parent=gene-HMPREF0889_0120;Dbxref=NCBI_GP:EFD93477.1;Name=EFD93477.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF0889_0120;product=comF family protein;protein_id=EFD93477.1;transl_table=11 ##sequence-region ADGP01000024.1 1 6054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000024.1 Genbank region 1 6054 . + . ID=ADGP01000024.1:1..6054;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000024.1 Genbank gene 1 6054 . - . ID=gene-HMPREF0889_1544;Name=HMPREF0889_1544;end_range=6054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1544;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000024.1 Genbank CDS 1 6054 . - 1 ID=cds-EFD93478.1;Parent=gene-HMPREF0889_1544;Dbxref=NCBI_GP:EFD93478.1;Name=EFD93478.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;end_range=6054,.;gbkey=CDS;locus_tag=HMPREF0889_1544;partial=true;product=Hep/Hag repeat protein;protein_id=EFD93478.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000023.1 1 155658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000023.1 Genbank region 1 155658 . + . ID=ADGP01000023.1:1..155658;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000023.1 Genbank gene 23 99 . - . ID=gene-HMPREF0889_1152;Name=HMPREF0889_1152;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1152 GCA_000177555.1|ADGP01000023.1 Genbank tRNA 23 99 . - . ID=rna-HMPREF0889_1152;Parent=gene-HMPREF0889_1152;gbkey=tRNA;locus_tag=HMPREF0889_1152;product=tRNA-Pro GCA_000177555.1|ADGP01000023.1 Genbank exon 23 99 . - . ID=exon-HMPREF0889_1152-1;Parent=rna-HMPREF0889_1152;gbkey=tRNA;locus_tag=HMPREF0889_1152;product=tRNA-Pro GCA_000177555.1|ADGP01000023.1 Genbank gene 530 727 . + . ID=gene-HMPREF0889_1153;Name=HMPREF0889_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1153 GCA_000177555.1|ADGP01000023.1 Genbank CDS 530 727 . + 0 ID=cds-EFD93479.1;Parent=gene-HMPREF0889_1153;Dbxref=NCBI_GP:EFD93479.1;Name=EFD93479.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1153;product=hypothetical protein;protein_id=EFD93479.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 849 1202 . + . ID=gene-HMPREF0889_1154;Name=HMPREF0889_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1154 GCA_000177555.1|ADGP01000023.1 Genbank CDS 849 1202 . + 0 ID=cds-EFD93480.1;Parent=gene-HMPREF0889_1154;Dbxref=NCBI_GP:EFD93480.1;Name=EFD93480.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1154;product=hypothetical protein;protein_id=EFD93480.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 2515 2880 . + . ID=gene-HMPREF0889_1155;Name=HMPREF0889_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1155 GCA_000177555.1|ADGP01000023.1 Genbank CDS 2515 2880 . + 0 ID=cds-EFD93481.1;Parent=gene-HMPREF0889_1155;Dbxref=NCBI_GP:EFD93481.1;Name=EFD93481.1;gbkey=CDS;locus_tag=HMPREF0889_1155;product=hypothetical protein;protein_id=EFD93481.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 2924 3139 . + . ID=gene-HMPREF0889_1156;Name=HMPREF0889_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1156 GCA_000177555.1|ADGP01000023.1 Genbank CDS 2924 3139 . + 0 ID=cds-EFD93482.1;Parent=gene-HMPREF0889_1156;Dbxref=NCBI_GP:EFD93482.1;Name=EFD93482.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1156;product=hypothetical protein;protein_id=EFD93482.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 3280 6771 . + . ID=gene-HMPREF0889_1157;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1157 GCA_000177555.1|ADGP01000023.1 Genbank CDS 3280 6771 . + 0 ID=cds-EFD93483.1;Parent=gene-HMPREF0889_1157;Dbxref=NCBI_GP:EFD93483.1;Name=EFD93483.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;gene=dnaE;locus_tag=HMPREF0889_1157;product=DNA polymerase III%2C alpha subunit;protein_id=EFD93483.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 6978 7538 . + . ID=gene-HMPREF0889_1158;Name=HMPREF0889_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1158 GCA_000177555.1|ADGP01000023.1 Genbank CDS 6978 7538 . + 0 ID=cds-EFD93484.1;Parent=gene-HMPREF0889_1158;Dbxref=NCBI_GP:EFD93484.1;Name=EFD93484.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1158;product=hypothetical protein;protein_id=EFD93484.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 7602 9119 . - . ID=gene-HMPREF0889_1159;Name=HMPREF0889_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1159 GCA_000177555.1|ADGP01000023.1 Genbank CDS 7602 9119 . - 0 ID=cds-EFD93485.1;Parent=gene-HMPREF0889_1159;Dbxref=NCBI_GP:EFD93485.1;Name=EFD93485.1;Note=identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795;gbkey=CDS;locus_tag=HMPREF0889_1159;product=transporter%2C lactate permease (LctP) family;protein_id=EFD93485.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 9359 9994 . - . ID=gene-HMPREF0889_1160;Name=HMPREF0889_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1160 GCA_000177555.1|ADGP01000023.1 Genbank CDS 9359 9994 . - 0 ID=cds-EFD93486.1;Parent=gene-HMPREF0889_1160;Dbxref=NCBI_GP:EFD93486.1;Name=EFD93486.1;Note=identified by match to protein family HMM PF06555;gbkey=CDS;locus_tag=HMPREF0889_1160;product=hypothetical protein;protein_id=EFD93486.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 10167 10934 . - . ID=gene-HMPREF0889_1161;Name=HMPREF0889_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1161 GCA_000177555.1|ADGP01000023.1 Genbank CDS 10167 10934 . - 0 ID=cds-EFD93487.1;Parent=gene-HMPREF0889_1161;Dbxref=NCBI_GP:EFD93487.1;Name=EFD93487.1;Note=identified by match to protein family HMM PF00912;gbkey=CDS;locus_tag=HMPREF0889_1161;product=transglycosylase;protein_id=EFD93487.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 11111 12340 . + . ID=gene-HMPREF0889_1162;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1162 GCA_000177555.1|ADGP01000023.1 Genbank CDS 11111 12340 . + 0 ID=cds-EFD93488.1;Parent=gene-HMPREF0889_1162;Dbxref=NCBI_GP:EFD93488.1;Name=EFD93488.1;Note=identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032;gbkey=CDS;gene=argG;locus_tag=HMPREF0889_1162;product=argininosuccinate synthase;protein_id=EFD93488.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 12362 13798 . + . ID=gene-HMPREF0889_1163;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1163 GCA_000177555.1|ADGP01000023.1 Genbank CDS 12362 13798 . + 0 ID=cds-EFD93489.1;Parent=gene-HMPREF0889_1163;Dbxref=NCBI_GP:EFD93489.1;Name=EFD93489.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838;gbkey=CDS;gene=argH;locus_tag=HMPREF0889_1163;product=argininosuccinate lyase;protein_id=EFD93489.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 13966 14805 . + . ID=gene-HMPREF0889_1164;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1164 GCA_000177555.1|ADGP01000023.1 Genbank CDS 13966 14805 . + 0 ID=cds-EFD93490.1;Parent=gene-HMPREF0889_1164;Dbxref=NCBI_GP:EFD93490.1;Name=EFD93490.1;Note=identified by match to protein family HMM PF03331%3B match to protein family HMM TIGR00325;gbkey=CDS;gene=lpxC;locus_tag=HMPREF0889_1164;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=EFD93490.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 14820 15263 . + . ID=gene-HMPREF0889_1165;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1165 GCA_000177555.1|ADGP01000023.1 Genbank CDS 14820 15263 . + 0 ID=cds-EFD93491.1;Parent=gene-HMPREF0889_1165;Dbxref=NCBI_GP:EFD93491.1;Name=EFD93491.1;Note=identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750;gbkey=CDS;gene=fabZ;locus_tag=HMPREF0889_1165;product=beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;protein_id=EFD93491.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 15461 16270 . + . ID=gene-HMPREF0889_1166;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1166 GCA_000177555.1|ADGP01000023.1 Genbank CDS 15461 16270 . + 0 ID=cds-EFD93492.1;Parent=gene-HMPREF0889_1166;Dbxref=NCBI_GP:EFD93492.1;Name=EFD93492.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01852;gbkey=CDS;gene=lpxA;locus_tag=HMPREF0889_1166;product=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase;protein_id=EFD93492.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 16387 17202 . + . ID=gene-HMPREF0889_1167;Name=HMPREF0889_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1167 GCA_000177555.1|ADGP01000023.1 Genbank CDS 16387 17202 . + 0 ID=cds-EFD93493.1;Parent=gene-HMPREF0889_1167;Dbxref=NCBI_GP:EFD93493.1;Name=EFD93493.1;Note=identified by match to protein family HMM PF06230;gbkey=CDS;locus_tag=HMPREF0889_1167;product=hypothetical protein;protein_id=EFD93493.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 17211 18353 . + . ID=gene-HMPREF0889_1168;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1168 GCA_000177555.1|ADGP01000023.1 Genbank CDS 17211 18353 . + 0 ID=cds-EFD93494.1;Parent=gene-HMPREF0889_1168;Dbxref=NCBI_GP:EFD93494.1;Name=EFD93494.1;Note=identified by match to protein family HMM PF02684%3B match to protein family HMM TIGR00215;gbkey=CDS;gene=lpxB;locus_tag=HMPREF0889_1168;product=lipid-A-disaccharide synthase;protein_id=EFD93494.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 18350 20104 . + . ID=gene-HMPREF0889_1169;Name=HMPREF0889_1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1169 GCA_000177555.1|ADGP01000023.1 Genbank CDS 18350 20104 . + 0 ID=cds-EFD93495.1;Parent=gene-HMPREF0889_1169;Dbxref=NCBI_GP:EFD93495.1;Name=EFD93495.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF0889_1169;product=putative lipid A export permease/ATP-binding protein MsbA;protein_id=EFD93495.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 20117 21427 . + . ID=gene-HMPREF0889_1170;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1170 GCA_000177555.1|ADGP01000023.1 Genbank CDS 20117 21427 . + 0 ID=cds-EFD93496.1;Parent=gene-HMPREF0889_1170;Dbxref=NCBI_GP:EFD93496.1;Name=EFD93496.1;Note=identified by match to protein family HMM PF04413;gbkey=CDS;gene=waaA;locus_tag=HMPREF0889_1170;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=EFD93496.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 21408 22544 . + . ID=gene-HMPREF0889_1171;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=HMPREF0889_1171 GCA_000177555.1|ADGP01000023.1 Genbank CDS 21408 22544 . + 0 ID=cds-EFD93497.1;Parent=gene-HMPREF0889_1171;Dbxref=NCBI_GP:EFD93497.1;Name=EFD93497.1;Note=identified by match to protein family HMM PF02606%3B match to protein family HMM TIGR00682;gbkey=CDS;gene=lpxK;locus_tag=HMPREF0889_1171;product=tetraacyldisaccharide 4'-kinase;protein_id=EFD93497.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 22541 23278 . + . ID=gene-HMPREF0889_1172;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1172 GCA_000177555.1|ADGP01000023.1 Genbank CDS 22541 23278 . + 0 ID=cds-EFD93498.1;Parent=gene-HMPREF0889_1172;Dbxref=NCBI_GP:EFD93498.1;Name=EFD93498.1;Note=identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466;gbkey=CDS;gene=kdsB;locus_tag=HMPREF0889_1172;product=3-deoxy-D-manno-octulosonate cytidylyltransferase;protein_id=EFD93498.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 23282 24127 . + . ID=gene-HMPREF0889_1173;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1173 GCA_000177555.1|ADGP01000023.1 Genbank CDS 23282 24127 . + 0 ID=cds-EFD93499.1;Parent=gene-HMPREF0889_1173;Dbxref=NCBI_GP:EFD93499.1;Name=EFD93499.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01362;gbkey=CDS;gene=kdsA;locus_tag=HMPREF0889_1173;product=3-deoxy-8-phosphooctulonate synthase;protein_id=EFD93499.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 24145 25116 . + . ID=gene-HMPREF0889_1174;Name=HMPREF0889_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1174 GCA_000177555.1|ADGP01000023.1 Genbank CDS 24145 25116 . + 0 ID=cds-EFD93500.1;Parent=gene-HMPREF0889_1174;Dbxref=NCBI_GP:EFD93500.1;Name=EFD93500.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR00393;gbkey=CDS;locus_tag=HMPREF0889_1174;product=sugar isomerase%2C KpsF/GutQ family;protein_id=EFD93500.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 25113 25649 . + . ID=gene-HMPREF0889_1175;Name=HMPREF0889_1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1175 GCA_000177555.1|ADGP01000023.1 Genbank CDS 25113 25649 . + 0 ID=cds-EFD93501.1;Parent=gene-HMPREF0889_1175;Dbxref=NCBI_GP:EFD93501.1;Name=EFD93501.1;Note=identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670;gbkey=CDS;locus_tag=HMPREF0889_1175;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family;protein_id=EFD93501.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 25668 26600 . + . ID=gene-HMPREF0889_1176;Name=HMPREF0889_1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1176 GCA_000177555.1|ADGP01000023.1 Genbank CDS 25668 26600 . + 0 ID=cds-EFD93502.1;Parent=gene-HMPREF0889_1176;Dbxref=NCBI_GP:EFD93502.1;Name=EFD93502.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF0889_1176;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EFD93502.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 26581 27132 . + . ID=gene-HMPREF0889_1177;Name=HMPREF0889_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1177 GCA_000177555.1|ADGP01000023.1 Genbank CDS 26581 27132 . + 0 ID=cds-EFD93503.1;Parent=gene-HMPREF0889_1177;Dbxref=NCBI_GP:EFD93503.1;Name=EFD93503.1;Note=identified by match to protein family HMM PF06835;gbkey=CDS;locus_tag=HMPREF0889_1177;product=hypothetical protein;protein_id=EFD93503.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 27135 27863 . + . ID=gene-HMPREF0889_1178;Name=HMPREF0889_1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1178 GCA_000177555.1|ADGP01000023.1 Genbank CDS 27135 27863 . + 0 ID=cds-EFD93504.1;Parent=gene-HMPREF0889_1178;Dbxref=NCBI_GP:EFD93504.1;Name=EFD93504.1;Note=identified by match to protein family HMM PF03968;gbkey=CDS;locus_tag=HMPREF0889_1178;product=OstA-like protein;protein_id=EFD93504.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 27881 28600 . + . ID=gene-HMPREF0889_1179;Name=HMPREF0889_1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1179 GCA_000177555.1|ADGP01000023.1 Genbank CDS 27881 28600 . + 0 ID=cds-EFD93505.1;Parent=gene-HMPREF0889_1179;Dbxref=NCBI_GP:EFD93505.1;Name=EFD93505.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1179;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93505.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 28617 29705 . + . ID=gene-HMPREF0889_1180;Name=HMPREF0889_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1180 GCA_000177555.1|ADGP01000023.1 Genbank CDS 28617 29705 . + 0 ID=cds-EFD93506.1;Parent=gene-HMPREF0889_1180;Dbxref=NCBI_GP:EFD93506.1;Name=EFD93506.1;Note=identified by match to protein family HMM PF03739;gbkey=CDS;locus_tag=HMPREF0889_1180;product=permease%2C YjgP/YjgQ family;protein_id=EFD93506.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 29798 31081 . + . ID=gene-HMPREF0889_1181;Name=HMPREF0889_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1181 GCA_000177555.1|ADGP01000023.1 Genbank CDS 29798 31081 . + 0 ID=cds-EFD93507.1;Parent=gene-HMPREF0889_1181;Dbxref=NCBI_GP:EFD93507.1;Name=EFD93507.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1181;product=hypothetical protein;protein_id=EFD93507.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 31091 31507 . + . ID=gene-HMPREF0889_1182;Name=HMPREF0889_1182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1182 GCA_000177555.1|ADGP01000023.1 Genbank CDS 31091 31507 . + 0 ID=cds-EFD93508.1;Parent=gene-HMPREF0889_1182;Dbxref=NCBI_GP:EFD93508.1;Name=EFD93508.1;gbkey=CDS;locus_tag=HMPREF0889_1182;product=hypothetical protein;protein_id=EFD93508.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 31504 32364 . + . ID=gene-HMPREF0889_1183;Name=HMPREF0889_1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1183 GCA_000177555.1|ADGP01000023.1 Genbank CDS 31504 32364 . + 0 ID=cds-EFD93509.1;Parent=gene-HMPREF0889_1183;Dbxref=NCBI_GP:EFD93509.1;Name=EFD93509.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF0889_1183;product=hypothetical protein;protein_id=EFD93509.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 32481 32717 . + . ID=gene-HMPREF0889_1184;Name=HMPREF0889_1184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1184 GCA_000177555.1|ADGP01000023.1 Genbank CDS 32481 32717 . + 0 ID=cds-EFD93510.1;Parent=gene-HMPREF0889_1184;Dbxref=NCBI_GP:EFD93510.1;Name=EFD93510.1;gbkey=CDS;locus_tag=HMPREF0889_1184;product=hypothetical protein;protein_id=EFD93510.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 32865 33407 . + . ID=gene-HMPREF0889_1185;Name=HMPREF0889_1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1185 GCA_000177555.1|ADGP01000023.1 Genbank CDS 32865 33407 . + 0 ID=cds-EFD93511.1;Parent=gene-HMPREF0889_1185;Dbxref=NCBI_GP:EFD93511.1;Name=EFD93511.1;Note=identified by match to protein family HMM PF08220;gbkey=CDS;locus_tag=HMPREF0889_1185;product=transcriptional regulator%2C DeoR family;protein_id=EFD93511.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 33423 34451 . + . ID=gene-HMPREF0889_1186;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=HMPREF0889_1186 GCA_000177555.1|ADGP01000023.1 Genbank CDS 33423 34451 . + 0 ID=cds-EFD93512.1;Parent=gene-HMPREF0889_1186;Dbxref=NCBI_GP:EFD93512.1;Name=EFD93512.1;Note=identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182;gbkey=CDS;gene=plsX;locus_tag=HMPREF0889_1186;product=fatty acid/phospholipid synthesis protein PlsX;protein_id=EFD93512.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 34423 35436 . + . ID=gene-HMPREF0889_1187;Name=HMPREF0889_1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1187 GCA_000177555.1|ADGP01000023.1 Genbank CDS 34423 35436 . + 0 ID=cds-EFD93513.1;Parent=gene-HMPREF0889_1187;Dbxref=NCBI_GP:EFD93513.1;Name=EFD93513.1;Note=identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747;gbkey=CDS;locus_tag=HMPREF0889_1187;product=3-oxoacyl-(acyl carrier protein) synthase III;protein_id=EFD93513.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 35454 36395 . + . ID=gene-HMPREF0889_1188;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1188 GCA_000177555.1|ADGP01000023.1 Genbank CDS 35454 36395 . + 0 ID=cds-EFD93514.1;Parent=gene-HMPREF0889_1188;Dbxref=NCBI_GP:EFD93514.1;Name=EFD93514.1;Note=identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128;gbkey=CDS;gene=fabD;locus_tag=HMPREF0889_1188;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=EFD93514.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 36397 37140 . + . ID=gene-HMPREF0889_1189;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1189 GCA_000177555.1|ADGP01000023.1 Genbank CDS 36397 37140 . + 0 ID=cds-EFD93515.1;Parent=gene-HMPREF0889_1189;Dbxref=NCBI_GP:EFD93515.1;Name=EFD93515.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;locus_tag=HMPREF0889_1189;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=EFD93515.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 37185 37430 . + . ID=gene-HMPREF0889_1190;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=HMPREF0889_1190 GCA_000177555.1|ADGP01000023.1 Genbank CDS 37185 37430 . + 0 ID=cds-EFD93516.1;Parent=gene-HMPREF0889_1190;Dbxref=NCBI_GP:EFD93516.1;Name=EFD93516.1;Note=identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517;gbkey=CDS;gene=acpP;locus_tag=HMPREF0889_1190;product=acyl carrier protein;protein_id=EFD93516.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 37498 38460 . + . ID=gene-HMPREF0889_1191;Name=HMPREF0889_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1191 GCA_000177555.1|ADGP01000023.1 Genbank CDS 37498 38460 . + 0 ID=cds-EFD93517.1;Parent=gene-HMPREF0889_1191;Dbxref=NCBI_GP:EFD93517.1;Name=EFD93517.1;Note=identified by match to protein family HMM PF03060;gbkey=CDS;locus_tag=HMPREF0889_1191;product=oxidoreductase%2C 2-nitropropane dioxygenase family protein;protein_id=EFD93517.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 38487 39743 . + . ID=gene-HMPREF0889_1192;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1192 GCA_000177555.1|ADGP01000023.1 Genbank CDS 38487 39743 . + 0 ID=cds-EFD93518.1;Parent=gene-HMPREF0889_1192;Dbxref=NCBI_GP:EFD93518.1;Name=EFD93518.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150;gbkey=CDS;gene=fabF;locus_tag=HMPREF0889_1192;product=beta-ketoacyl-acyl-carrier-protein synthase II;protein_id=EFD93518.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 39751 40461 . + . ID=gene-HMPREF0889_1193;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=HMPREF0889_1193 GCA_000177555.1|ADGP01000023.1 Genbank CDS 39751 40461 . + 0 ID=cds-EFD93519.1;Parent=gene-HMPREF0889_1193;Dbxref=NCBI_GP:EFD93519.1;Name=EFD93519.1;Note=identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;locus_tag=HMPREF0889_1193;product=ribonuclease III;protein_id=EFD93519.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 40504 41580 . + . ID=gene-HMPREF0889_1194;Name=HMPREF0889_1194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1194 GCA_000177555.1|ADGP01000023.1 Genbank CDS 40504 41580 . + 0 ID=cds-EFD93520.1;Parent=gene-HMPREF0889_1194;Dbxref=NCBI_GP:EFD93520.1;Name=EFD93520.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_1194;product=putative radical SAM protein%2C TIGR01212 family;protein_id=EFD93520.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 41573 42328 . + . ID=gene-HMPREF0889_1195;Name=HMPREF0889_1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1195 GCA_000177555.1|ADGP01000023.1 Genbank CDS 41573 42328 . + 0 ID=cds-EFD93521.1;Parent=gene-HMPREF0889_1195;Dbxref=NCBI_GP:EFD93521.1;Name=EFD93521.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;locus_tag=HMPREF0889_1195;product=LytTr DNA-binding domain protein;protein_id=EFD93521.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 42482 43888 . + . ID=gene-HMPREF0889_1196;Name=HMPREF0889_1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1196 GCA_000177555.1|ADGP01000023.1 Genbank CDS 42482 43888 . + 0 ID=cds-EFD93522.1;Parent=gene-HMPREF0889_1196;Dbxref=NCBI_GP:EFD93522.1;Name=EFD93522.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_1196;product=radical SAM domain protein;protein_id=EFD93522.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 43936 44109 . + . ID=gene-HMPREF0889_1197;Name=HMPREF0889_1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1197 GCA_000177555.1|ADGP01000023.1 Genbank CDS 43936 44109 . + 0 ID=cds-EFD93523.1;Parent=gene-HMPREF0889_1197;Dbxref=NCBI_GP:EFD93523.1;Name=EFD93523.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1197;product=hypothetical protein;protein_id=EFD93523.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 44192 45571 . + . ID=gene-HMPREF0889_1198;Name=pycB;gbkey=Gene;gene=pycB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1198 GCA_000177555.1|ADGP01000023.1 Genbank CDS 44192 45571 . + 0 ID=cds-EFD93524.1;Parent=gene-HMPREF0889_1198;Dbxref=NCBI_GP:EFD93524.1;Name=EFD93524.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF02436;gbkey=CDS;gene=pycB;locus_tag=HMPREF0889_1198;product=pyruvate carboxylase subunit B;protein_id=EFD93524.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 45710 46522 . + . ID=gene-HMPREF0889_1199;Name=HMPREF0889_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1199 GCA_000177555.1|ADGP01000023.1 Genbank CDS 45710 46522 . + 0 ID=cds-EFD93525.1;Parent=gene-HMPREF0889_1199;Dbxref=NCBI_GP:EFD93525.1;Name=EFD93525.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032;gbkey=CDS;locus_tag=HMPREF0889_1199;product=RNA methyltransferase%2C TrmH family;protein_id=EFD93525.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 46531 47451 . + . ID=gene-HMPREF0889_1200;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1200 GCA_000177555.1|ADGP01000023.1 Genbank CDS 46531 47451 . + 0 ID=cds-EFD93526.1;Parent=gene-HMPREF0889_1200;Dbxref=NCBI_GP:EFD93526.1;Name=EFD93526.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=HMPREF0889_1200;product=ribonuclease HII;protein_id=EFD93526.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 47459 48307 . + . ID=gene-HMPREF0889_1201;Name=HMPREF0889_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1201 GCA_000177555.1|ADGP01000023.1 Genbank CDS 47459 48307 . + 0 ID=cds-EFD93527.1;Parent=gene-HMPREF0889_1201;Dbxref=NCBI_GP:EFD93527.1;Name=EFD93527.1;Note=identified by match to protein family HMM PF04794;gbkey=CDS;locus_tag=HMPREF0889_1201;product=putative hopanoid biosynthesis associated protein HpnK;protein_id=EFD93527.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 48320 49249 . + . ID=gene-HMPREF0889_1202;Name=HMPREF0889_1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1202 GCA_000177555.1|ADGP01000023.1 Genbank CDS 48320 49249 . + 0 ID=cds-EFD93528.1;Parent=gene-HMPREF0889_1202;Dbxref=NCBI_GP:EFD93528.1;Name=EFD93528.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;locus_tag=HMPREF0889_1202;product=NAD dependent epimerase/dehydratase family protein;protein_id=EFD93528.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 49246 49695 . + . ID=gene-HMPREF0889_1203;Name=HMPREF0889_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1203 GCA_000177555.1|ADGP01000023.1 Genbank CDS 49246 49695 . + 0 ID=cds-EFD93529.1;Parent=gene-HMPREF0889_1203;Dbxref=NCBI_GP:EFD93529.1;Name=EFD93529.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF0889_1203;product=ACT domain protein;protein_id=EFD93529.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 49715 51001 . + . ID=gene-HMPREF0889_1204;Name=HMPREF0889_1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1204 GCA_000177555.1|ADGP01000023.1 Genbank CDS 49715 51001 . + 0 ID=cds-EFD93530.1;Parent=gene-HMPREF0889_1204;Dbxref=NCBI_GP:EFD93530.1;Name=EFD93530.1;Note=identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447;gbkey=CDS;locus_tag=HMPREF0889_1204;product=homoserine dehydrogenase;protein_id=EFD93530.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 51005 51928 . + . ID=gene-HMPREF0889_1205;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1205 GCA_000177555.1|ADGP01000023.1 Genbank CDS 51005 51928 . + 0 ID=cds-EFD93531.1;Parent=gene-HMPREF0889_1205;Dbxref=NCBI_GP:EFD93531.1;Name=EFD93531.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00191;gbkey=CDS;gene=thrB;locus_tag=HMPREF0889_1205;product=homoserine kinase;protein_id=EFD93531.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 52107 52862 . + . ID=gene-HMPREF0889_1206;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1206 GCA_000177555.1|ADGP01000023.1 Genbank CDS 52107 52862 . + 0 ID=cds-EFD93532.1;Parent=gene-HMPREF0889_1206;Dbxref=NCBI_GP:EFD93532.1;Name=EFD93532.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;locus_tag=HMPREF0889_1206;product=deoxyribose-phosphate aldolase;protein_id=EFD93532.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 52954 53610 . + . ID=gene-HMPREF0889_1207;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1207 GCA_000177555.1|ADGP01000023.1 Genbank CDS 52954 53610 . + 0 ID=cds-EFD93533.1;Parent=gene-HMPREF0889_1207;Dbxref=NCBI_GP:EFD93533.1;Name=EFD93533.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;locus_tag=HMPREF0889_1207;product=deoxyribose-phosphate aldolase;protein_id=EFD93533.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 53600 54541 . + . ID=gene-HMPREF0889_1208;Name=HMPREF0889_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1208 GCA_000177555.1|ADGP01000023.1 Genbank CDS 53600 54541 . + 0 ID=cds-EFD93534.1;Parent=gene-HMPREF0889_1208;Dbxref=NCBI_GP:EFD93534.1;Name=EFD93534.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF0889_1208;product=metallo-beta-lactamase domain protein;protein_id=EFD93534.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 54561 55670 . + . ID=gene-HMPREF0889_1209;Name=HMPREF0889_1209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1209 GCA_000177555.1|ADGP01000023.1 Genbank CDS 54561 55670 . + 0 ID=cds-EFD93535.1;Parent=gene-HMPREF0889_1209;Dbxref=NCBI_GP:EFD93535.1;Name=EFD93535.1;Note=identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595;gbkey=CDS;locus_tag=HMPREF0889_1209;product=trypsin;protein_id=EFD93535.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 55667 56146 . + . ID=gene-HMPREF0889_1210;Name=HMPREF0889_1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1210 GCA_000177555.1|ADGP01000023.1 Genbank CDS 55667 56146 . + 0 ID=cds-EFD93536.1;Parent=gene-HMPREF0889_1210;Dbxref=NCBI_GP:EFD93536.1;Name=EFD93536.1;Note=identified by match to protein family HMM PF02590;gbkey=CDS;locus_tag=HMPREF0889_1210;product=putative rRNA large subunit m3Psi methyltransferase RlmH;protein_id=EFD93536.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 56249 56722 . + . ID=gene-HMPREF0889_1211;Name=HMPREF0889_1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1211 GCA_000177555.1|ADGP01000023.1 Genbank CDS 56249 56722 . + 0 ID=cds-EFD93537.1;Parent=gene-HMPREF0889_1211;Dbxref=NCBI_GP:EFD93537.1;Name=EFD93537.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;locus_tag=HMPREF0889_1211;product=CBS domain protein;protein_id=EFD93537.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 56938 57501 . + . ID=gene-HMPREF0889_1212;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1212 GCA_000177555.1|ADGP01000023.1 Genbank CDS 56938 57501 . + 0 ID=cds-EFD93538.1;Parent=gene-HMPREF0889_1212;Dbxref=NCBI_GP:EFD93538.1;Name=EFD93538.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137;gbkey=CDS;gene=ahpC;locus_tag=HMPREF0889_1212;product=peroxiredoxin;protein_id=EFD93538.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 57513 59165 . + . ID=gene-HMPREF0889_1213;Name=HMPREF0889_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1213 GCA_000177555.1|ADGP01000023.1 Genbank CDS 57513 59165 . + 0 ID=cds-EFD93539.1;Parent=gene-HMPREF0889_1213;Dbxref=NCBI_GP:EFD93539.1;Name=EFD93539.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF0889_1213;product=putative thioredoxin-disulfide reductase;protein_id=EFD93539.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 59608 60519 . + . ID=gene-HMPREF0889_1214;Name=HMPREF0889_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1214 GCA_000177555.1|ADGP01000023.1 Genbank CDS 59608 60519 . + 0 ID=cds-EFD93540.1;Parent=gene-HMPREF0889_1214;Dbxref=NCBI_GP:EFD93540.1;Name=EFD93540.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF0889_1214;product=transcriptional regulator%2C AraC family;protein_id=EFD93540.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 60796 63387 . + . ID=gene-HMPREF0889_1215;Name=HMPREF0889_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1215 GCA_000177555.1|ADGP01000023.1 Genbank CDS 60796 63387 . + 0 ID=cds-EFD93541.1;Parent=gene-HMPREF0889_1215;Dbxref=NCBI_GP:EFD93541.1;Name=EFD93541.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01774;gbkey=CDS;locus_tag=HMPREF0889_1215;product=formate C-acetyltransferase;protein_id=EFD93541.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 63426 64367 . + . ID=gene-HMPREF0889_1216;Name=HMPREF0889_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1216 GCA_000177555.1|ADGP01000023.1 Genbank CDS 63426 64367 . + 0 ID=cds-EFD93542.1;Parent=gene-HMPREF0889_1216;Dbxref=NCBI_GP:EFD93542.1;Name=EFD93542.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;locus_tag=HMPREF0889_1216;product=glycyl-radical enzyme activating protein family protein;protein_id=EFD93542.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 64378 65190 . + . ID=gene-HMPREF0889_1217;Name=HMPREF0889_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1217 GCA_000177555.1|ADGP01000023.1 Genbank CDS 64378 65190 . + 0 ID=cds-EFD93543.1;Parent=gene-HMPREF0889_1217;Dbxref=NCBI_GP:EFD93543.1;Name=EFD93543.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;locus_tag=HMPREF0889_1217;product=BMC domain protein;protein_id=EFD93543.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 65218 65496 . + . ID=gene-HMPREF0889_1218;Name=HMPREF0889_1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1218 GCA_000177555.1|ADGP01000023.1 Genbank CDS 65218 65496 . + 0 ID=cds-EFD93544.1;Parent=gene-HMPREF0889_1218;Dbxref=NCBI_GP:EFD93544.1;Name=EFD93544.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;locus_tag=HMPREF0889_1218;product=BMC domain protein;protein_id=EFD93544.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 65511 66227 . + . ID=gene-HMPREF0889_1219;Name=HMPREF0889_1219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1219 GCA_000177555.1|ADGP01000023.1 Genbank CDS 65511 66227 . + 0 ID=cds-EFD93545.1;Parent=gene-HMPREF0889_1219;Dbxref=NCBI_GP:EFD93545.1;Name=EFD93545.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1219;product=hypothetical protein;protein_id=EFD93545.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 66233 66517 . + . ID=gene-HMPREF0889_1220;Name=HMPREF0889_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1220 GCA_000177555.1|ADGP01000023.1 Genbank CDS 66233 66517 . + 0 ID=cds-EFD93546.1;Parent=gene-HMPREF0889_1220;Dbxref=NCBI_GP:EFD93546.1;Name=EFD93546.1;Note=identified by match to protein family HMM PF00936;gbkey=CDS;locus_tag=HMPREF0889_1220;product=BMC domain protein;protein_id=EFD93546.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 66535 66732 . + . ID=gene-HMPREF0889_1221;Name=HMPREF0889_1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1221 GCA_000177555.1|ADGP01000023.1 Genbank CDS 66535 66732 . + 0 ID=cds-EFD93547.1;Parent=gene-HMPREF0889_1221;Dbxref=NCBI_GP:EFD93547.1;Name=EFD93547.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1221;product=hypothetical protein;protein_id=EFD93547.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 66772 67032 . + . ID=gene-HMPREF0889_1222;Name=HMPREF0889_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1222 GCA_000177555.1|ADGP01000023.1 Genbank CDS 66772 67032 . + 0 ID=cds-EFD93548.1;Parent=gene-HMPREF0889_1222;Dbxref=NCBI_GP:EFD93548.1;Name=EFD93548.1;Note=identified by match to protein family HMM PF03319;gbkey=CDS;locus_tag=HMPREF0889_1222;product=ethanolamine utilization protein EutN/carboxysome structural protein Ccml;protein_id=EFD93548.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 67089 67931 . + . ID=gene-HMPREF0889_1223;Name=HMPREF0889_1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1223 GCA_000177555.1|ADGP01000023.1 Genbank CDS 67089 67931 . + 0 ID=cds-EFD93549.1;Parent=gene-HMPREF0889_1223;Dbxref=NCBI_GP:EFD93549.1;Name=EFD93549.1;Note=identified by match to protein family HMM TIGR02529;gbkey=CDS;locus_tag=HMPREF0889_1223;product=ethanolamine utilization protein EutJ family protein;protein_id=EFD93549.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 67912 69333 . + . ID=gene-HMPREF0889_1224;Name=HMPREF0889_1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1224 GCA_000177555.1|ADGP01000023.1 Genbank CDS 67912 69333 . + 0 ID=cds-EFD93550.1;Parent=gene-HMPREF0889_1224;Dbxref=NCBI_GP:EFD93550.1;Name=EFD93550.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;locus_tag=HMPREF0889_1224;product=aldehyde dehydrogenase (NAD) family protein;protein_id=EFD93550.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 69349 70473 . + . ID=gene-HMPREF0889_1225;Name=HMPREF0889_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1225 GCA_000177555.1|ADGP01000023.1 Genbank CDS 69349 70473 . + 0 ID=cds-EFD93551.1;Parent=gene-HMPREF0889_1225;Dbxref=NCBI_GP:EFD93551.1;Name=EFD93551.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF0889_1225;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFD93551.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 70592 70668 . - . ID=gene-HMPREF0889_1226;Name=HMPREF0889_1226;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1226 GCA_000177555.1|ADGP01000023.1 Genbank tRNA 70592 70668 . - . ID=rna-HMPREF0889_1226;Parent=gene-HMPREF0889_1226;gbkey=tRNA;locus_tag=HMPREF0889_1226;product=tRNA-Val GCA_000177555.1|ADGP01000023.1 Genbank exon 70592 70668 . - . ID=exon-HMPREF0889_1226-1;Parent=rna-HMPREF0889_1226;gbkey=tRNA;locus_tag=HMPREF0889_1226;product=tRNA-Val GCA_000177555.1|ADGP01000023.1 Genbank gene 70758 73367 . - . ID=gene-HMPREF0889_1227;Name=HMPREF0889_1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1227 GCA_000177555.1|ADGP01000023.1 Genbank CDS 70758 73367 . - 0 ID=cds-EFD93552.1;Parent=gene-HMPREF0889_1227;Dbxref=NCBI_GP:EFD93552.1;Name=EFD93552.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM PF00929%3B match to protein family HMM TIGR00573;gbkey=CDS;locus_tag=HMPREF0889_1227;product=exonuclease%2C DNA polymerase III%2C epsilon subunit family;protein_id=EFD93552.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 73539 74735 . + . ID=gene-HMPREF0889_1228;Name=HMPREF0889_1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1228 GCA_000177555.1|ADGP01000023.1 Genbank CDS 73539 74735 . + 0 ID=cds-EFD93553.1;Parent=gene-HMPREF0889_1228;Dbxref=NCBI_GP:EFD93553.1;Name=EFD93553.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;locus_tag=HMPREF0889_1228;product=type II/IV secretion system protein;protein_id=EFD93553.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 74698 75642 . + . ID=gene-HMPREF0889_1229;Name=HMPREF0889_1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1229 GCA_000177555.1|ADGP01000023.1 Genbank CDS 74698 75642 . + 0 ID=cds-EFD93554.1;Parent=gene-HMPREF0889_1229;Dbxref=NCBI_GP:EFD93554.1;Name=EFD93554.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;locus_tag=HMPREF0889_1229;product=twitching motility protein;protein_id=EFD93554.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 75639 76838 . + . ID=gene-HMPREF0889_1230;Name=HMPREF0889_1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1230 GCA_000177555.1|ADGP01000023.1 Genbank CDS 75639 76838 . + 0 ID=cds-EFD93555.1;Parent=gene-HMPREF0889_1230;Dbxref=NCBI_GP:EFD93555.1;Name=EFD93555.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;locus_tag=HMPREF0889_1230;product=bacterial type II secretion system domain protein F;protein_id=EFD93555.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 76855 77262 . + . ID=gene-HMPREF0889_1231;Name=HMPREF0889_1231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1231 GCA_000177555.1|ADGP01000023.1 Genbank CDS 76855 77262 . + 0 ID=cds-EFD93556.1;Parent=gene-HMPREF0889_1231;Dbxref=NCBI_GP:EFD93556.1;Name=EFD93556.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;locus_tag=HMPREF0889_1231;product=putative general secretion pathway protein G;protein_id=EFD93556.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 77287 77427 . + . ID=gene-HMPREF0889_1232;Name=HMPREF0889_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1232 GCA_000177555.1|ADGP01000023.1 Genbank CDS 77287 77427 . + 0 ID=cds-EFD93557.1;Parent=gene-HMPREF0889_1232;Dbxref=NCBI_GP:EFD93557.1;Name=EFD93557.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1232;product=hypothetical protein;protein_id=EFD93557.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 77424 77729 . + . ID=gene-HMPREF0889_1233;Name=HMPREF0889_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1233 GCA_000177555.1|ADGP01000023.1 Genbank CDS 77424 77729 . + 0 ID=cds-EFD93558.1;Parent=gene-HMPREF0889_1233;Dbxref=NCBI_GP:EFD93558.1;Name=EFD93558.1;gbkey=CDS;locus_tag=HMPREF0889_1233;product=hypothetical protein;protein_id=EFD93558.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 77687 78154 . + . ID=gene-HMPREF0889_1234;Name=HMPREF0889_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1234 GCA_000177555.1|ADGP01000023.1 Genbank CDS 77687 78154 . + 0 ID=cds-EFD93559.1;Parent=gene-HMPREF0889_1234;Dbxref=NCBI_GP:EFD93559.1;Name=EFD93559.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1234;product=hypothetical protein;protein_id=EFD93559.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 78147 78503 . + . ID=gene-HMPREF0889_1235;Name=HMPREF0889_1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1235 GCA_000177555.1|ADGP01000023.1 Genbank CDS 78147 78503 . + 0 ID=cds-EFD93560.1;Parent=gene-HMPREF0889_1235;Dbxref=NCBI_GP:EFD93560.1;Name=EFD93560.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1235;product=hypothetical protein;protein_id=EFD93560.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 78517 79002 . + . ID=gene-HMPREF0889_1236;Name=HMPREF0889_1236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1236 GCA_000177555.1|ADGP01000023.1 Genbank CDS 78517 79002 . + 0 ID=cds-EFD93561.1;Parent=gene-HMPREF0889_1236;Dbxref=NCBI_GP:EFD93561.1;Name=EFD93561.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1236;product=hypothetical protein;protein_id=EFD93561.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 79024 79467 . + . ID=gene-HMPREF0889_1237;Name=HMPREF0889_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1237 GCA_000177555.1|ADGP01000023.1 Genbank CDS 79024 79467 . + 0 ID=cds-EFD93562.1;Parent=gene-HMPREF0889_1237;Dbxref=NCBI_GP:EFD93562.1;Name=EFD93562.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1237;product=hypothetical protein;protein_id=EFD93562.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 79486 80250 . + . ID=gene-HMPREF0889_1238;Name=HMPREF0889_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1238 GCA_000177555.1|ADGP01000023.1 Genbank CDS 79486 80250 . + 0 ID=cds-EFD93563.1;Parent=gene-HMPREF0889_1238;Dbxref=NCBI_GP:EFD93563.1;Name=EFD93563.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1238;product=hypothetical protein;protein_id=EFD93563.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 80265 80846 . + . ID=gene-HMPREF0889_1239;Name=HMPREF0889_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1239 GCA_000177555.1|ADGP01000023.1 Genbank CDS 80265 80846 . + 0 ID=cds-EFD93564.1;Parent=gene-HMPREF0889_1239;Dbxref=NCBI_GP:EFD93564.1;Name=EFD93564.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1239;product=hypothetical protein;protein_id=EFD93564.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 80884 81258 . + . ID=gene-HMPREF0889_1240;Name=HMPREF0889_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1240 GCA_000177555.1|ADGP01000023.1 Genbank CDS 80884 81258 . + 0 ID=cds-EFD93565.1;Parent=gene-HMPREF0889_1240;Dbxref=NCBI_GP:EFD93565.1;Name=EFD93565.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1240;product=hypothetical protein;protein_id=EFD93565.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 81496 82107 . + . ID=gene-HMPREF0889_1241;Name=HMPREF0889_1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1241 GCA_000177555.1|ADGP01000023.1 Genbank CDS 81496 82107 . + 0 ID=cds-EFD93566.1;Parent=gene-HMPREF0889_1241;Dbxref=NCBI_GP:EFD93566.1;Name=EFD93566.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;locus_tag=HMPREF0889_1241;product=transporter%2C MotA/TolQ/ExbB proton channel family protein;protein_id=EFD93566.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 82119 82523 . + . ID=gene-HMPREF0889_1242;Name=HMPREF0889_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1242 GCA_000177555.1|ADGP01000023.1 Genbank CDS 82119 82523 . + 0 ID=cds-EFD93567.1;Parent=gene-HMPREF0889_1242;Dbxref=NCBI_GP:EFD93567.1;Name=EFD93567.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;locus_tag=HMPREF0889_1242;product=transport energizing protein%2C ExbD/TolR family;protein_id=EFD93567.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 82531 83322 . + . ID=gene-HMPREF0889_1243;Name=HMPREF0889_1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1243 GCA_000177555.1|ADGP01000023.1 Genbank CDS 82531 83322 . + 0 ID=cds-EFD93568.1;Parent=gene-HMPREF0889_1243;Dbxref=NCBI_GP:EFD93568.1;Name=EFD93568.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;locus_tag=HMPREF0889_1243;product=TonB family domain protein;protein_id=EFD93568.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 83467 83985 . + . ID=gene-HMPREF0889_1244;Name=HMPREF0889_1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1244 GCA_000177555.1|ADGP01000023.1 Genbank CDS 83467 83985 . + 0 ID=cds-EFD93569.1;Parent=gene-HMPREF0889_1244;Dbxref=NCBI_GP:EFD93569.1;Name=EFD93569.1;gbkey=CDS;locus_tag=HMPREF0889_1244;product=flavodoxin family protein;protein_id=EFD93569.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 83998 85677 . + . ID=gene-HMPREF0889_1245;Name=HMPREF0889_1245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1245 GCA_000177555.1|ADGP01000023.1 Genbank CDS 83998 85677 . + 0 ID=cds-EFD93570.1;Parent=gene-HMPREF0889_1245;Dbxref=NCBI_GP:EFD93570.1;Name=EFD93570.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_1245;product=radical SAM domain protein;protein_id=EFD93570.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 86056 87393 . + . ID=gene-HMPREF0889_1247;Name=HMPREF0889_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1247 GCA_000177555.1|ADGP01000023.1 Genbank CDS 86056 87393 . + 0 ID=cds-EFD93571.1;Parent=gene-HMPREF0889_1247;Dbxref=NCBI_GP:EFD93571.1;Name=EFD93571.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF0889_1247;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFD93571.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 87379 87525 . - . ID=gene-HMPREF0889_1246;Name=HMPREF0889_1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1246 GCA_000177555.1|ADGP01000023.1 Genbank CDS 87379 87525 . - 0 ID=cds-EFD93572.1;Parent=gene-HMPREF0889_1246;Dbxref=NCBI_GP:EFD93572.1;Name=EFD93572.1;gbkey=CDS;locus_tag=HMPREF0889_1246;product=hypothetical protein;protein_id=EFD93572.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank sequence_feature 87563 87803 . + . ID=id-ADGP01000023.1:87563..87803;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000023.1 Genbank gene 87572 87691 . + . ID=gene-HMPREF0889_1248;Name=HMPREF0889_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1248 GCA_000177555.1|ADGP01000023.1 Genbank CDS 87572 87691 . + 0 ID=cds-EFD93573.1;Parent=gene-HMPREF0889_1248;Dbxref=NCBI_GP:EFD93573.1;Name=EFD93573.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1248;product=hypothetical protein;protein_id=EFD93573.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 87901 88911 . + . ID=gene-HMPREF0889_1250;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1250 GCA_000177555.1|ADGP01000023.1 Genbank CDS 87901 88911 . + 0 ID=cds-EFD93574.1;Parent=gene-HMPREF0889_1250;Dbxref=NCBI_GP:EFD93574.1;Name=EFD93574.1;Note=identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465;gbkey=CDS;gene=ilvC;locus_tag=HMPREF0889_1250;product=ketol-acid reductoisomerase;protein_id=EFD93574.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 89000 90700 . + . ID=gene-HMPREF0889_1251;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1251 GCA_000177555.1|ADGP01000023.1 Genbank CDS 89000 90700 . + 0 ID=cds-EFD93575.1;Parent=gene-HMPREF0889_1251;Dbxref=NCBI_GP:EFD93575.1;Name=EFD93575.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118;gbkey=CDS;gene=ilvB;locus_tag=HMPREF0889_1251;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=EFD93575.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 90697 91197 . + . ID=gene-HMPREF0889_1252;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=HMPREF0889_1252 GCA_000177555.1|ADGP01000023.1 Genbank CDS 90697 91197 . + 0 ID=cds-EFD93576.1;Parent=gene-HMPREF0889_1252;Dbxref=NCBI_GP:EFD93576.1;Name=EFD93576.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119;gbkey=CDS;gene=ilvN;locus_tag=HMPREF0889_1252;product=acetolactate synthase%2C small subunit;protein_id=EFD93576.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 91218 92870 . + . ID=gene-HMPREF0889_1253;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1253 GCA_000177555.1|ADGP01000023.1 Genbank CDS 91218 92870 . + 0 ID=cds-EFD93577.1;Parent=gene-HMPREF0889_1253;Dbxref=NCBI_GP:EFD93577.1;Name=EFD93577.1;Note=identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110;gbkey=CDS;gene=ilvD;locus_tag=HMPREF0889_1253;product=dihydroxy-acid dehydratase;protein_id=EFD93577.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 92824 92979 . + . ID=gene-HMPREF0889_1254;Name=HMPREF0889_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1254 GCA_000177555.1|ADGP01000023.1 Genbank CDS 92824 92979 . + 0 ID=cds-EFD93578.1;Parent=gene-HMPREF0889_1254;Dbxref=NCBI_GP:EFD93578.1;Name=EFD93578.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1254;product=hypothetical protein;protein_id=EFD93578.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank sequence_feature 93015 93219 . + . ID=id-ADGP01000023.1:93015..93219;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000023.1 Genbank gene 93262 95922 . + . ID=gene-HMPREF0889_1256;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1256 GCA_000177555.1|ADGP01000023.1 Genbank CDS 93262 95922 . + 0 ID=cds-EFD93579.1;Parent=gene-HMPREF0889_1256;Dbxref=NCBI_GP:EFD93579.1;Name=EFD93579.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;locus_tag=HMPREF0889_1256;product=valine--tRNA ligase;protein_id=EFD93579.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 95935 97239 . + . ID=gene-HMPREF0889_1257;Name=fgs;gbkey=Gene;gene=fgs;gene_biotype=protein_coding;locus_tag=HMPREF0889_1257 GCA_000177555.1|ADGP01000023.1 Genbank CDS 95935 97239 . + 0 ID=cds-EFD93580.1;Parent=gene-HMPREF0889_1257;Dbxref=NCBI_GP:EFD93580.1;Name=EFD93580.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499;gbkey=CDS;gene=fgs;locus_tag=HMPREF0889_1257;product=tetrahydrofolate synthase;protein_id=EFD93580.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 97436 97798 . + . ID=gene-HMPREF0889_1259;Name=HMPREF0889_1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1259 GCA_000177555.1|ADGP01000023.1 Genbank CDS 97436 97798 . + 0 ID=cds-EFD93581.1;Parent=gene-HMPREF0889_1259;Dbxref=NCBI_GP:EFD93581.1;Name=EFD93581.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1259;product=hypothetical protein;protein_id=EFD93581.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 97779 97922 . - . ID=gene-HMPREF0889_1258;Name=HMPREF0889_1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1258 GCA_000177555.1|ADGP01000023.1 Genbank CDS 97779 97922 . - 0 ID=cds-EFD93582.1;Parent=gene-HMPREF0889_1258;Dbxref=NCBI_GP:EFD93582.1;Name=EFD93582.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1258;product=hypothetical protein;protein_id=EFD93582.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 97939 99204 . + . ID=gene-HMPREF0889_1260;Name=HMPREF0889_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1260 GCA_000177555.1|ADGP01000023.1 Genbank CDS 97939 99204 . + 0 ID=cds-EFD93583.1;Parent=gene-HMPREF0889_1260;Dbxref=NCBI_GP:EFD93583.1;Name=EFD93583.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;locus_tag=HMPREF0889_1260;product=O-antigen polymerase;protein_id=EFD93583.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 99284 99949 . + . ID=gene-HMPREF0889_1261;Name=HMPREF0889_1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1261 GCA_000177555.1|ADGP01000023.1 Genbank CDS 99284 99949 . + 0 ID=cds-EFD93584.1;Parent=gene-HMPREF0889_1261;Dbxref=NCBI_GP:EFD93584.1;Name=EFD93584.1;Note=identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971;gbkey=CDS;locus_tag=HMPREF0889_1261;product=CoA binding domain protein;protein_id=EFD93584.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 100089 100529 . + . ID=gene-HMPREF0889_1262;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=HMPREF0889_1262 GCA_000177555.1|ADGP01000023.1 Genbank CDS 100089 100529 . + 0 ID=cds-EFD93585.1;Parent=gene-HMPREF0889_1262;Dbxref=NCBI_GP:EFD93585.1;Name=EFD93585.1;Note=identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066;gbkey=CDS;gene=rplM;locus_tag=HMPREF0889_1262;product=ribosomal protein L13;protein_id=EFD93585.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 100548 100943 . + . ID=gene-HMPREF0889_1263;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=HMPREF0889_1263 GCA_000177555.1|ADGP01000023.1 Genbank CDS 100548 100943 . + 0 ID=cds-EFD93586.1;Parent=gene-HMPREF0889_1263;Dbxref=NCBI_GP:EFD93586.1;Name=EFD93586.1;Note=identified by match to protein family HMM PF00380;gbkey=CDS;gene=rpsI;locus_tag=HMPREF0889_1263;product=ribosomal protein S9;protein_id=EFD93586.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 101154 102689 . + . ID=gene-HMPREF0889_1264;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1264 GCA_000177555.1|ADGP01000023.1 Genbank CDS 101154 102689 . + 0 ID=cds-EFD93587.1;Parent=gene-HMPREF0889_1264;Dbxref=NCBI_GP:EFD93587.1;Name=EFD93587.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888;gbkey=CDS;gene=guaA;locus_tag=HMPREF0889_1264;product=GMP synthase (glutamine-hydrolyzing) domain protein;protein_id=EFD93587.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 103198 105366 . + . ID=gene-HMPREF0889_1265;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=HMPREF0889_1265 GCA_000177555.1|ADGP01000023.1 Genbank CDS 103198 105366 . + 0 ID=cds-EFD93588.1;Parent=gene-HMPREF0889_1265;Dbxref=NCBI_GP:EFD93588.1;Name=EFD93588.1;Note=identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571;gbkey=CDS;gene=dam;locus_tag=HMPREF0889_1265;product=DNA adenine methylase;protein_id=EFD93588.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 105367 107349 . + . ID=gene-HMPREF0889_1266;Name=alwI;gbkey=Gene;gene=alwI;gene_biotype=protein_coding;locus_tag=HMPREF0889_1266 GCA_000177555.1|ADGP01000023.1 Genbank CDS 105367 107349 . + 0 ID=cds-EFD93589.1;Parent=gene-HMPREF0889_1266;Dbxref=NCBI_GP:EFD93589.1;Name=EFD93589.1;Note=identified by match to protein family HMM PF09491;gbkey=CDS;gene=alwI;locus_tag=HMPREF0889_1266;product=AlwI restriction endonuclease;protein_id=EFD93589.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 107373 108140 . + . ID=gene-HMPREF0889_1267;Name=HMPREF0889_1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1267 GCA_000177555.1|ADGP01000023.1 Genbank CDS 107373 108140 . + 0 ID=cds-EFD93590.1;Parent=gene-HMPREF0889_1267;Dbxref=NCBI_GP:EFD93590.1;Name=EFD93590.1;gbkey=CDS;locus_tag=HMPREF0889_1267;product=hypothetical protein;protein_id=EFD93590.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 108151 110598 . + . ID=gene-HMPREF0889_1268;Name=HMPREF0889_1268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1268 GCA_000177555.1|ADGP01000023.1 Genbank CDS 108151 110598 . + 0 ID=cds-EFD93591.1;Parent=gene-HMPREF0889_1268;Dbxref=NCBI_GP:EFD93591.1;Name=EFD93591.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF0889_1268;product=DEAD/DEAH box helicase;protein_id=EFD93591.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 110621 110743 . + . ID=gene-HMPREF0889_1269;Name=HMPREF0889_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1269 GCA_000177555.1|ADGP01000023.1 Genbank CDS 110621 110743 . + 0 ID=cds-EFD93592.1;Parent=gene-HMPREF0889_1269;Dbxref=NCBI_GP:EFD93592.1;Name=EFD93592.1;gbkey=CDS;locus_tag=HMPREF0889_1269;product=hypothetical protein;protein_id=EFD93592.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 111245 111892 . + . ID=gene-HMPREF0889_1270;Name=HMPREF0889_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1270 GCA_000177555.1|ADGP01000023.1 Genbank CDS 111245 111892 . + 0 ID=cds-EFD93593.1;Parent=gene-HMPREF0889_1270;Dbxref=NCBI_GP:EFD93593.1;Name=EFD93593.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00665;gbkey=CDS;locus_tag=HMPREF0889_1270;product=integrase core domain protein;protein_id=EFD93593.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 112015 112893 . + . ID=gene-HMPREF0889_1271;Name=HMPREF0889_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1271 GCA_000177555.1|ADGP01000023.1 Genbank CDS 112015 112893 . + 0 ID=cds-EFD93594.1;Parent=gene-HMPREF0889_1271;Dbxref=NCBI_GP:EFD93594.1;Name=EFD93594.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1271;product=hypothetical protein;protein_id=EFD93594.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 112896 114524 . + . ID=gene-HMPREF0889_1272;Name=HMPREF0889_1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1272 GCA_000177555.1|ADGP01000023.1 Genbank CDS 112896 114524 . + 0 ID=cds-EFD93595.1;Parent=gene-HMPREF0889_1272;Dbxref=NCBI_GP:EFD93595.1;Name=EFD93595.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;locus_tag=HMPREF0889_1272;product=conserved hypothetical protein TIGR03982;protein_id=EFD93595.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 114622 116139 . + . ID=gene-HMPREF0889_1273;Name=HMPREF0889_1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1273 GCA_000177555.1|ADGP01000023.1 Genbank CDS 114622 116139 . + 0 ID=cds-EFD93596.1;Parent=gene-HMPREF0889_1273;Dbxref=NCBI_GP:EFD93596.1;Name=EFD93596.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1273;product=hypothetical protein;protein_id=EFD93596.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 116337 116675 . + . ID=gene-HMPREF0889_1274;Name=HMPREF0889_1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1274 GCA_000177555.1|ADGP01000023.1 Genbank CDS 116337 116675 . + 0 ID=cds-EFD93597.1;Parent=gene-HMPREF0889_1274;Dbxref=NCBI_GP:EFD93597.1;Name=EFD93597.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1274;product=hypothetical protein;protein_id=EFD93597.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 116866 117465 . + . ID=gene-HMPREF0889_1275;Name=HMPREF0889_1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1275 GCA_000177555.1|ADGP01000023.1 Genbank CDS 116866 117465 . + 0 ID=cds-EFD93598.1;Parent=gene-HMPREF0889_1275;Dbxref=NCBI_GP:EFD93598.1;Name=EFD93598.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1275;product=hypothetical protein;protein_id=EFD93598.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 118512 119513 . + . ID=gene-HMPREF0889_1276;Name=hpaIIM;gbkey=Gene;gene=hpaIIM;gene_biotype=protein_coding;locus_tag=HMPREF0889_1276 GCA_000177555.1|ADGP01000023.1 Genbank CDS 118512 119513 . + 0 ID=cds-EFD93599.1;Parent=gene-HMPREF0889_1276;Dbxref=NCBI_GP:EFD93599.1;Name=EFD93599.1;Note=identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675;gbkey=CDS;gene=hpaIIM;locus_tag=HMPREF0889_1276;product=modification methylase HpaII;protein_id=EFD93599.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 119787 120668 . + . ID=gene-HMPREF0889_1277;Name=HMPREF0889_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1277 GCA_000177555.1|ADGP01000023.1 Genbank CDS 119787 120668 . + 0 ID=cds-EFD93600.1;Parent=gene-HMPREF0889_1277;Dbxref=NCBI_GP:EFD93600.1;Name=EFD93600.1;Note=identified by match to protein family HMM PF07751;gbkey=CDS;locus_tag=HMPREF0889_1277;product=Abi-like protein;protein_id=EFD93600.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 121473 121549 . + . ID=gene-HMPREF0889_1278;Name=HMPREF0889_1278;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1278 GCA_000177555.1|ADGP01000023.1 Genbank tRNA 121473 121549 . + . ID=rna-HMPREF0889_1278;Parent=gene-HMPREF0889_1278;gbkey=tRNA;locus_tag=HMPREF0889_1278;product=tRNA-Arg GCA_000177555.1|ADGP01000023.1 Genbank exon 121473 121549 . + . ID=exon-HMPREF0889_1278-1;Parent=rna-HMPREF0889_1278;gbkey=tRNA;locus_tag=HMPREF0889_1278;product=tRNA-Arg GCA_000177555.1|ADGP01000023.1 Genbank gene 121868 122341 . - . ID=gene-HMPREF0889_1279;Name=HMPREF0889_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1279 GCA_000177555.1|ADGP01000023.1 Genbank CDS 121868 122341 . - 0 ID=cds-EFD93601.1;Parent=gene-HMPREF0889_1279;Dbxref=NCBI_GP:EFD93601.1;Name=EFD93601.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=HMPREF0889_1279;product=cytidine and deoxycytidylate deaminase zinc-binding region;protein_id=EFD93601.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 122460 123134 . + . ID=gene-HMPREF0889_1280;Name=HMPREF0889_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1280 GCA_000177555.1|ADGP01000023.1 Genbank CDS 122460 123134 . + 0 ID=cds-EFD93602.1;Parent=gene-HMPREF0889_1280;Dbxref=NCBI_GP:EFD93602.1;Name=EFD93602.1;Note=identified by match to protein family HMM PF03458;gbkey=CDS;locus_tag=HMPREF0889_1280;product=hypothetical protein;protein_id=EFD93602.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 123149 124990 . + . ID=gene-HMPREF0889_1281;Name=HMPREF0889_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1281 GCA_000177555.1|ADGP01000023.1 Genbank CDS 123149 124990 . + 0 ID=cds-EFD93603.1;Parent=gene-HMPREF0889_1281;Dbxref=NCBI_GP:EFD93603.1;Name=EFD93603.1;gbkey=CDS;locus_tag=HMPREF0889_1281;product=hypothetical protein;protein_id=EFD93603.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 125360 125806 . + . ID=gene-HMPREF0889_1282;Name=HMPREF0889_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1282 GCA_000177555.1|ADGP01000023.1 Genbank CDS 125360 125806 . + 0 ID=cds-EFD93604.1;Parent=gene-HMPREF0889_1282;Dbxref=NCBI_GP:EFD93604.1;Name=EFD93604.1;Note=identified by match to protein family HMM PF09424;gbkey=CDS;locus_tag=HMPREF0889_1282;product=YqeY-like protein;protein_id=EFD93604.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 125955 127856 . + . ID=gene-HMPREF0889_1283;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1283 GCA_000177555.1|ADGP01000023.1 Genbank CDS 125955 127856 . + 0 ID=cds-EFD93605.1;Parent=gene-HMPREF0889_1283;Dbxref=NCBI_GP:EFD93605.1;Name=EFD93605.1;Note=identified by match to protein family HMM PF00120;gbkey=CDS;gene=glnA;locus_tag=HMPREF0889_1283;product=glutamate--ammonia ligase%2C catalytic domain protein;protein_id=EFD93605.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 128014 128127 . + . ID=gene-HMPREF0889_1284;Name=HMPREF0889_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1284 GCA_000177555.1|ADGP01000023.1 Genbank CDS 128014 128127 . + 0 ID=cds-EFD93606.1;Parent=gene-HMPREF0889_1284;Dbxref=NCBI_GP:EFD93606.1;Name=EFD93606.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1284;product=hypothetical protein;protein_id=EFD93606.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 128124 129800 . + . ID=gene-HMPREF0889_1285;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=HMPREF0889_1285 GCA_000177555.1|ADGP01000023.1 Genbank CDS 128124 129800 . + 0 ID=cds-EFD93607.1;Parent=gene-HMPREF0889_1285;Dbxref=NCBI_GP:EFD93607.1;Name=EFD93607.1;Note=identified by match to protein family HMM PF01268;gbkey=CDS;gene=fhs;locus_tag=HMPREF0889_1285;product=formate--tetrahydrofolate ligase;protein_id=EFD93607.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 129800 130423 . + . ID=gene-HMPREF0889_1286;Name=HMPREF0889_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1286 GCA_000177555.1|ADGP01000023.1 Genbank CDS 129800 130423 . + 0 ID=cds-EFD93608.1;Parent=gene-HMPREF0889_1286;Dbxref=NCBI_GP:EFD93608.1;Name=EFD93608.1;Note=identified by match to protein family HMM PF04961;gbkey=CDS;locus_tag=HMPREF0889_1286;product=Formiminotransferase-cyclodeaminase;protein_id=EFD93608.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 130796 131035 . + . ID=gene-HMPREF0889_1287;Name=HMPREF0889_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1287 GCA_000177555.1|ADGP01000023.1 Genbank CDS 130796 131035 . + 0 ID=cds-EFD93609.1;Parent=gene-HMPREF0889_1287;Dbxref=NCBI_GP:EFD93609.1;Name=EFD93609.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF0889_1287;product=DNA-binding helix-turn-helix protein;protein_id=EFD93609.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 131028 132611 . + . ID=gene-HMPREF0889_1288;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=HMPREF0889_1288 GCA_000177555.1|ADGP01000023.1 Genbank CDS 131028 132611 . + 0 ID=cds-EFD93610.1;Parent=gene-HMPREF0889_1288;Dbxref=NCBI_GP:EFD93610.1;Name=EFD93610.1;Note=identified by match to protein family HMM PF02384%3B match to protein family HMM TIGR00497;gbkey=CDS;gene=hsdM;locus_tag=HMPREF0889_1288;product=type I restriction-modification system%2C M subunit;protein_id=EFD93610.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 132608 133600 . + . ID=gene-HMPREF0889_1289;Name=HMPREF0889_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1289 GCA_000177555.1|ADGP01000023.1 Genbank CDS 132608 133600 . + 0 ID=cds-EFD93611.1;Parent=gene-HMPREF0889_1289;Dbxref=NCBI_GP:EFD93611.1;Name=EFD93611.1;gbkey=CDS;locus_tag=HMPREF0889_1289;product=hypothetical protein;protein_id=EFD93611.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 133597 135474 . + . ID=gene-HMPREF0889_1290;Name=HMPREF0889_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1290 GCA_000177555.1|ADGP01000023.1 Genbank CDS 133597 135474 . + 0 ID=cds-EFD93612.1;Parent=gene-HMPREF0889_1290;Dbxref=NCBI_GP:EFD93612.1;Name=EFD93612.1;Note=identified by match to protein family HMM PF01420;gbkey=CDS;locus_tag=HMPREF0889_1290;product=type I restriction modification DNA specificity domain protein;protein_id=EFD93612.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 135494 138793 . + . ID=gene-HMPREF0889_1291;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=HMPREF0889_1291 GCA_000177555.1|ADGP01000023.1 Genbank CDS 135494 138793 . + 0 ID=cds-EFD93613.1;Parent=gene-HMPREF0889_1291;Dbxref=NCBI_GP:EFD93613.1;Name=EFD93613.1;Note=identified by match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348;gbkey=CDS;gene=hsdR;locus_tag=HMPREF0889_1291;product=type I site-specific deoxyribonuclease%2C HsdR family;protein_id=EFD93613.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 138965 140071 . - . ID=gene-HMPREF0889_1292;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1292 GCA_000177555.1|ADGP01000023.1 Genbank CDS 138965 140071 . - 0 ID=cds-EFD93614.1;Parent=gene-HMPREF0889_1292;Dbxref=NCBI_GP:EFD93614.1;Name=EFD93614.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;gene=ychF;locus_tag=HMPREF0889_1292;product=GTP-binding protein YchF;protein_id=EFD93614.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 140085 141326 . - . ID=gene-HMPREF0889_1293;Name=HMPREF0889_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1293 GCA_000177555.1|ADGP01000023.1 Genbank CDS 140085 141326 . - 0 ID=cds-EFD93615.1;Parent=gene-HMPREF0889_1293;Dbxref=NCBI_GP:EFD93615.1;Name=EFD93615.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR03542;gbkey=CDS;locus_tag=HMPREF0889_1293;product=LL-diaminopimelate aminotransferase;protein_id=EFD93615.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 141473 142690 . - . ID=gene-HMPREF0889_1294;Name=HMPREF0889_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1294 GCA_000177555.1|ADGP01000023.1 Genbank CDS 141473 142690 . - 0 ID=cds-EFD93616.1;Parent=gene-HMPREF0889_1294;Dbxref=NCBI_GP:EFD93616.1;Name=EFD93616.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF0889_1294;product=efflux ABC transporter%2C permease protein;protein_id=EFD93616.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 142680 143387 . - . ID=gene-HMPREF0889_1295;Name=HMPREF0889_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1295 GCA_000177555.1|ADGP01000023.1 Genbank CDS 142680 143387 . - 0 ID=cds-EFD93617.1;Parent=gene-HMPREF0889_1295;Dbxref=NCBI_GP:EFD93617.1;Name=EFD93617.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1295;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93617.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 143397 144497 . - . ID=gene-HMPREF0889_1296;Name=HMPREF0889_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1296 GCA_000177555.1|ADGP01000023.1 Genbank CDS 143397 144497 . - 0 ID=cds-EFD93618.1;Parent=gene-HMPREF0889_1296;Dbxref=NCBI_GP:EFD93618.1;Name=EFD93618.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF0889_1296;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFD93618.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 144666 145892 . + . ID=gene-HMPREF0889_1297;Name=cytX;gbkey=Gene;gene=cytX;gene_biotype=protein_coding;locus_tag=HMPREF0889_1297 GCA_000177555.1|ADGP01000023.1 Genbank CDS 144666 145892 . + 0 ID=cds-EFD93619.1;Parent=gene-HMPREF0889_1297;Dbxref=NCBI_GP:EFD93619.1;Name=EFD93619.1;Note=identified by match to protein family HMM PF02133%3B match to protein family HMM TIGR02358;gbkey=CDS;gene=cytX;locus_tag=HMPREF0889_1297;product=putative hydroxymethylpyrimidine transporter CytX;protein_id=EFD93619.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 145950 148052 . - . ID=gene-HMPREF0889_1298;Name=HMPREF0889_1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1298 GCA_000177555.1|ADGP01000023.1 Genbank CDS 145950 148052 . - 0 ID=cds-EFD93620.1;Parent=gene-HMPREF0889_1298;Dbxref=NCBI_GP:EFD93620.1;Name=EFD93620.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;locus_tag=HMPREF0889_1298;product=putative penicillin-binding protein 1B;protein_id=EFD93620.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 148342 150711 . + . ID=gene-HMPREF0889_1299;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1299 GCA_000177555.1|ADGP01000023.1 Genbank CDS 148342 150711 . + 0 ID=cds-EFD93621.1;Parent=gene-HMPREF0889_1299;Dbxref=NCBI_GP:EFD93621.1;Name=EFD93621.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01418;gbkey=CDS;gene=ppsA;locus_tag=HMPREF0889_1299;product=pyruvate%2C water dikinase;protein_id=EFD93621.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 150804 151448 . + . ID=gene-HMPREF0889_1300;Name=HMPREF0889_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1300 GCA_000177555.1|ADGP01000023.1 Genbank CDS 150804 151448 . + 0 ID=cds-EFD93622.1;Parent=gene-HMPREF0889_1300;Dbxref=NCBI_GP:EFD93622.1;Name=EFD93622.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF08279;gbkey=CDS;locus_tag=HMPREF0889_1300;product=HTH domain protein;protein_id=EFD93622.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 151450 152271 . + . ID=gene-HMPREF0889_1301;Name=HMPREF0889_1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1301 GCA_000177555.1|ADGP01000023.1 Genbank CDS 151450 152271 . + 0 ID=cds-EFD93623.1;Parent=gene-HMPREF0889_1301;Dbxref=NCBI_GP:EFD93623.1;Name=EFD93623.1;Note=identified by match to protein family HMM PF03618;gbkey=CDS;locus_tag=HMPREF0889_1301;product=hypothetical protein;protein_id=EFD93623.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 152598 154505 . + . ID=gene-HMPREF0889_1302;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1302 GCA_000177555.1|ADGP01000023.1 Genbank CDS 152598 154505 . + 0 ID=cds-EFD93624.1;Parent=gene-HMPREF0889_1302;Dbxref=NCBI_GP:EFD93624.1;Name=EFD93624.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418;gbkey=CDS;gene=thrS;locus_tag=HMPREF0889_1302;product=threonine--tRNA ligase;protein_id=EFD93624.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 154632 154751 . + . ID=gene-HMPREF0889_1303;Name=HMPREF0889_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1303 GCA_000177555.1|ADGP01000023.1 Genbank CDS 154632 154751 . + 0 ID=cds-EFD93625.1;Parent=gene-HMPREF0889_1303;Dbxref=NCBI_GP:EFD93625.1;Name=EFD93625.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1303;product=hypothetical protein;protein_id=EFD93625.1;transl_table=11 GCA_000177555.1|ADGP01000023.1 Genbank gene 155059 155658 . + . ID=gene-HMPREF0889_1304;Name=HMPREF0889_1304;end_range=155658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1304;partial=true GCA_000177555.1|ADGP01000023.1 Genbank CDS 155059 155658 . + 0 ID=cds-EFD93626.1;Parent=gene-HMPREF0889_1304;Dbxref=NCBI_GP:EFD93626.1;Name=EFD93626.1;Note=identified by match to protein family HMM TIGR01714;end_range=155658,.;gbkey=CDS;locus_tag=HMPREF0889_1304;partial=true;product=phage replisome organizer N-terminal domain protein;protein_id=EFD93626.1;transl_table=11 ##sequence-region ADGP01000022.1 1 19194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000022.1 Genbank region 1 19194 . + . ID=ADGP01000022.1:1..19194;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000022.1 Genbank gene 1 413 . + . ID=gene-HMPREF0889_0429;Name=HMPREF0889_0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0429;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000022.1 Genbank CDS 1 413 . + 2 ID=cds-EFD93627.1;Parent=gene-HMPREF0889_0429;Dbxref=NCBI_GP:EFD93627.1;Name=EFD93627.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF0889_0429;partial=true;product=hypothetical protein;protein_id=EFD93627.1;start_range=.,1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 967 5280 . + . ID=gene-HMPREF0889_0430;Name=HMPREF0889_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0430 GCA_000177555.1|ADGP01000022.1 Genbank CDS 967 5280 . + 0 ID=cds-EFD93628.1;Parent=gene-HMPREF0889_0430;Dbxref=NCBI_GP:EFD93628.1;Name=EFD93628.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0430;product=hypothetical protein;protein_id=EFD93628.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 5350 6207 . - . ID=gene-HMPREF0889_0431;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0431 GCA_000177555.1|ADGP01000022.1 Genbank CDS 5350 6207 . - 0 ID=cds-EFD93629.1;Parent=gene-HMPREF0889_0431;Dbxref=NCBI_GP:EFD93629.1;Name=EFD93629.1;Note=identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676;gbkey=CDS;gene=metF;locus_tag=HMPREF0889_0431;product=methylenetetrahydrofolate reductase (NAD(P)H);protein_id=EFD93629.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 6301 7125 . - . ID=gene-HMPREF0889_0432;Name=HMPREF0889_0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0432 GCA_000177555.1|ADGP01000022.1 Genbank CDS 6301 7125 . - 0 ID=cds-EFD93630.1;Parent=gene-HMPREF0889_0432;Dbxref=NCBI_GP:EFD93630.1;Name=EFD93630.1;Note=identified by match to protein family HMM PF03180%3B match to protein family HMM TIGR00363;gbkey=CDS;locus_tag=HMPREF0889_0432;product=lipoprotein%2C YaeC family;protein_id=EFD93630.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank binding_site 7214 7309 . - . ID=id-ADGP01000022.1:7214..7309;Note=SAM riboswitch (S box leader)%3B Rfam score 75.92;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162 GCA_000177555.1|ADGP01000022.1 Genbank sequence_feature 7474 7725 . + . ID=id-ADGP01000022.1:7474..7725;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000022.1 Genbank gene 7770 8585 . + . ID=gene-HMPREF0889_0435;Name=HMPREF0889_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0435 GCA_000177555.1|ADGP01000022.1 Genbank CDS 7770 8585 . + 0 ID=cds-EFD93631.1;Parent=gene-HMPREF0889_0435;Dbxref=NCBI_GP:EFD93631.1;Name=EFD93631.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0435;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93631.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 8582 9265 . + . ID=gene-HMPREF0889_0436;Name=HMPREF0889_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0436 GCA_000177555.1|ADGP01000022.1 Genbank CDS 8582 9265 . + 0 ID=cds-EFD93632.1;Parent=gene-HMPREF0889_0436;Dbxref=NCBI_GP:EFD93632.1;Name=EFD93632.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF0889_0436;product=cobalt transport protein;protein_id=EFD93632.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 9278 10753 . + . ID=gene-HMPREF0889_0437;Name=HMPREF0889_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0437 GCA_000177555.1|ADGP01000022.1 Genbank CDS 9278 10753 . + 0 ID=cds-EFD93633.1;Parent=gene-HMPREF0889_0437;Dbxref=NCBI_GP:EFD93633.1;Name=EFD93633.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0437;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93633.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 10874 10999 . + . ID=gene-HMPREF0889_0438;Name=HMPREF0889_0438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0438 GCA_000177555.1|ADGP01000022.1 Genbank CDS 10874 10999 . + 0 ID=cds-EFD93634.1;Parent=gene-HMPREF0889_0438;Dbxref=NCBI_GP:EFD93634.1;Name=EFD93634.1;gbkey=CDS;locus_tag=HMPREF0889_0438;product=hypothetical protein;protein_id=EFD93634.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 11020 11751 . - . ID=gene-HMPREF0889_0439;Name=HMPREF0889_0439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0439 GCA_000177555.1|ADGP01000022.1 Genbank CDS 11020 11751 . - 0 ID=cds-EFD93635.1;Parent=gene-HMPREF0889_0439;Dbxref=NCBI_GP:EFD93635.1;Name=EFD93635.1;Note=identified by match to protein family HMM PF01063;gbkey=CDS;locus_tag=HMPREF0889_0439;product=aminotransferase%2C class IV;protein_id=EFD93635.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 11735 13117 . - . ID=gene-HMPREF0889_0440;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0440 GCA_000177555.1|ADGP01000022.1 Genbank CDS 11735 13117 . - 0 ID=cds-EFD93636.1;Parent=gene-HMPREF0889_0440;Dbxref=NCBI_GP:EFD93636.1;Name=EFD93636.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00553;gbkey=CDS;gene=pabB;locus_tag=HMPREF0889_0440;product=aminodeoxychorismate synthase%2C component I;protein_id=EFD93636.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 13114 13716 . - . ID=gene-HMPREF0889_0441;Name=HMPREF0889_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0441 GCA_000177555.1|ADGP01000022.1 Genbank CDS 13114 13716 . - 0 ID=cds-EFD93637.1;Parent=gene-HMPREF0889_0441;Dbxref=NCBI_GP:EFD93637.1;Name=EFD93637.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;locus_tag=HMPREF0889_0441;product=glutamine amidotransferase%2C class I;protein_id=EFD93637.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 13937 14206 . + . ID=gene-HMPREF0889_0442;Name=HMPREF0889_0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0442 GCA_000177555.1|ADGP01000022.1 Genbank CDS 13937 14206 . + 0 ID=cds-EFD93638.1;Parent=gene-HMPREF0889_0442;Dbxref=NCBI_GP:EFD93638.1;Name=EFD93638.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0442;product=hypothetical protein;protein_id=EFD93638.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 14325 14398 . + . ID=gene-HMPREF0889_0443;Name=HMPREF0889_0443;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0443 GCA_000177555.1|ADGP01000022.1 Genbank tRNA 14325 14398 . + . ID=rna-HMPREF0889_0443;Parent=gene-HMPREF0889_0443;gbkey=tRNA;locus_tag=HMPREF0889_0443;product=tRNA-Gly GCA_000177555.1|ADGP01000022.1 Genbank exon 14325 14398 . + . ID=exon-HMPREF0889_0443-1;Parent=rna-HMPREF0889_0443;gbkey=tRNA;locus_tag=HMPREF0889_0443;product=tRNA-Gly GCA_000177555.1|ADGP01000022.1 Genbank gene 14522 15688 . + . ID=gene-HMPREF0889_0444;Name=HMPREF0889_0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0444 GCA_000177555.1|ADGP01000022.1 Genbank CDS 14522 15688 . + 0 ID=cds-EFD93639.1;Parent=gene-HMPREF0889_0444;Dbxref=NCBI_GP:EFD93639.1;Name=EFD93639.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF0889_0444;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFD93639.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 15745 16257 . - . ID=gene-HMPREF0889_0445;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0445 GCA_000177555.1|ADGP01000022.1 Genbank CDS 15745 16257 . - 0 ID=cds-EFD93640.1;Parent=gene-HMPREF0889_0445;Dbxref=NCBI_GP:EFD93640.1;Name=EFD93640.1;Note=identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011;gbkey=CDS;gene=ybaK;locus_tag=HMPREF0889_0445;product=YbaK/EbsC protein;protein_id=EFD93640.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 16330 17175 . + . ID=gene-HMPREF0889_0446;Name=HMPREF0889_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0446 GCA_000177555.1|ADGP01000022.1 Genbank CDS 16330 17175 . + 0 ID=cds-EFD93641.1;Parent=gene-HMPREF0889_0446;Dbxref=NCBI_GP:EFD93641.1;Name=EFD93641.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=HMPREF0889_0446;product=hydrolase%2C carbon-nitrogen family;protein_id=EFD93641.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 17257 18606 . - . ID=gene-HMPREF0889_0447;Name=HMPREF0889_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0447 GCA_000177555.1|ADGP01000022.1 Genbank CDS 17257 18606 . - 0 ID=cds-EFD93642.1;Parent=gene-HMPREF0889_0447;Dbxref=NCBI_GP:EFD93642.1;Name=EFD93642.1;Note=identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812;gbkey=CDS;locus_tag=HMPREF0889_0447;product=Glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein;protein_id=EFD93642.1;transl_table=11 GCA_000177555.1|ADGP01000022.1 Genbank gene 18945 19020 . + . ID=gene-HMPREF0889_0448;Name=HMPREF0889_0448;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0448 GCA_000177555.1|ADGP01000022.1 Genbank tRNA 18945 19020 . + . ID=rna-HMPREF0889_0448;Parent=gene-HMPREF0889_0448;gbkey=tRNA;locus_tag=HMPREF0889_0448;product=tRNA-Ala GCA_000177555.1|ADGP01000022.1 Genbank exon 18945 19020 . + . ID=exon-HMPREF0889_0448-1;Parent=rna-HMPREF0889_0448;gbkey=tRNA;locus_tag=HMPREF0889_0448;product=tRNA-Ala GCA_000177555.1|ADGP01000022.1 Genbank gene 18972 19160 . + . ID=gene-HMPREF0889_0449;Name=HMPREF0889_0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0449 GCA_000177555.1|ADGP01000022.1 Genbank CDS 18972 19160 . + 0 ID=cds-EFD93643.1;Parent=gene-HMPREF0889_0449;Dbxref=NCBI_GP:EFD93643.1;Name=EFD93643.1;gbkey=CDS;locus_tag=HMPREF0889_0449;product=hypothetical protein;protein_id=EFD93643.1;transl_table=11 ##sequence-region ADGP01000021.1 1 173539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000021.1 Genbank region 1 173539 . + . ID=ADGP01000021.1:1..173539;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000021.1 Genbank gene 82 1644 . - . ID=gene-HMPREF0889_0992;Name=HMPREF0889_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0992 GCA_000177555.1|ADGP01000021.1 Genbank CDS 82 1644 . - 0 ID=cds-EFD93644.1;Parent=gene-HMPREF0889_0992;Dbxref=NCBI_GP:EFD93644.1;Name=EFD93644.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF0889_0992;product=DEAD/DEAH box helicase;protein_id=EFD93644.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 1850 1925 . - . ID=gene-HMPREF0889_0993;Name=HMPREF0889_0993;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0993 GCA_000177555.1|ADGP01000021.1 Genbank tRNA 1850 1925 . - . ID=rna-HMPREF0889_0993;Parent=gene-HMPREF0889_0993;gbkey=tRNA;locus_tag=HMPREF0889_0993;product=tRNA-Lys GCA_000177555.1|ADGP01000021.1 Genbank exon 1850 1925 . - . ID=exon-HMPREF0889_0993-1;Parent=rna-HMPREF0889_0993;gbkey=tRNA;locus_tag=HMPREF0889_0993;product=tRNA-Lys GCA_000177555.1|ADGP01000021.1 Genbank gene 2203 4326 . + . ID=gene-HMPREF0889_0994;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0994 GCA_000177555.1|ADGP01000021.1 Genbank CDS 2203 4326 . + 0 ID=cds-EFD93645.1;Parent=gene-HMPREF0889_0994;Dbxref=NCBI_GP:EFD93645.1;Name=EFD93645.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0994;product=TonB-dependent receptor plug domain protein;protein_id=EFD93645.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 4342 6459 . + . ID=gene-HMPREF0889_0995;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0995 GCA_000177555.1|ADGP01000021.1 Genbank CDS 4342 6459 . + 0 ID=cds-EFD93646.1;Parent=gene-HMPREF0889_0995;Dbxref=NCBI_GP:EFD93646.1;Name=EFD93646.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0995;product=TonB-dependent receptor plug domain protein;protein_id=EFD93646.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 6449 7249 . + . ID=gene-HMPREF0889_0996;Name=HMPREF0889_0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0996 GCA_000177555.1|ADGP01000021.1 Genbank CDS 6449 7249 . + 0 ID=cds-EFD93647.1;Parent=gene-HMPREF0889_0996;Dbxref=NCBI_GP:EFD93647.1;Name=EFD93647.1;gbkey=CDS;locus_tag=HMPREF0889_0996;product=TonB family domain protein;protein_id=EFD93647.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 7344 7574 . - . ID=gene-HMPREF0889_0997;Name=HMPREF0889_0997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0997 GCA_000177555.1|ADGP01000021.1 Genbank CDS 7344 7574 . - 0 ID=cds-EFD93648.1;Parent=gene-HMPREF0889_0997;Dbxref=NCBI_GP:EFD93648.1;Name=EFD93648.1;gbkey=CDS;locus_tag=HMPREF0889_0997;product=hypothetical protein;protein_id=EFD93648.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 7558 8298 . - . ID=gene-HMPREF0889_0998;Name=HMPREF0889_0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0998 GCA_000177555.1|ADGP01000021.1 Genbank CDS 7558 8298 . - 0 ID=cds-EFD93649.1;Parent=gene-HMPREF0889_0998;Dbxref=NCBI_GP:EFD93649.1;Name=EFD93649.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF0889_0998;product=Ser/Thr phosphatase family protein;protein_id=EFD93649.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 8311 9096 . - . ID=gene-HMPREF0889_0999;Name=HMPREF0889_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0999 GCA_000177555.1|ADGP01000021.1 Genbank CDS 8311 9096 . - 0 ID=cds-EFD93650.1;Parent=gene-HMPREF0889_0999;Dbxref=NCBI_GP:EFD93650.1;Name=EFD93650.1;gbkey=CDS;locus_tag=HMPREF0889_0999;product=hypothetical protein;protein_id=EFD93650.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 9202 10269 . + . ID=gene-HMPREF0889_1000;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=HMPREF0889_1000 GCA_000177555.1|ADGP01000021.1 Genbank CDS 9202 10269 . + 0 ID=cds-EFD93651.1;Parent=gene-HMPREF0889_1000;Dbxref=NCBI_GP:EFD93651.1;Name=EFD93651.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084;gbkey=CDS;gene=mutY;locus_tag=HMPREF0889_1000;product=A/G-specific adenine glycosylase;protein_id=EFD93651.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 10266 11501 . + . ID=gene-HMPREF0889_1001;Name=HMPREF0889_1001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1001 GCA_000177555.1|ADGP01000021.1 Genbank CDS 10266 11501 . + 0 ID=cds-EFD93652.1;Parent=gene-HMPREF0889_1001;Dbxref=NCBI_GP:EFD93652.1;Name=EFD93652.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF0889_1001;product=Tat pathway signal sequence domain protein;protein_id=EFD93652.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 11522 12613 . - . ID=gene-HMPREF0889_1002;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1002 GCA_000177555.1|ADGP01000021.1 Genbank CDS 11522 12613 . - 0 ID=cds-EFD93653.1;Parent=gene-HMPREF0889_1002;Dbxref=NCBI_GP:EFD93653.1;Name=EFD93653.1;Note=identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;gene=dprA;locus_tag=HMPREF0889_1002;product=DNA protecting protein DprA;protein_id=EFD93653.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 12634 14151 . - . ID=gene-HMPREF0889_1003;Name=HMPREF0889_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1003 GCA_000177555.1|ADGP01000021.1 Genbank CDS 12634 14151 . - 0 ID=cds-EFD93654.1;Parent=gene-HMPREF0889_1003;Dbxref=NCBI_GP:EFD93654.1;Name=EFD93654.1;Note=identified by match to protein family HMM PF01078%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00368;gbkey=CDS;locus_tag=HMPREF0889_1003;product=Mg chelatase-like protein;protein_id=EFD93654.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 14160 14528 . - . ID=gene-HMPREF0889_1004;Name=HMPREF0889_1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1004 GCA_000177555.1|ADGP01000021.1 Genbank CDS 14160 14528 . - 0 ID=cds-EFD93655.1;Parent=gene-HMPREF0889_1004;Dbxref=NCBI_GP:EFD93655.1;Name=EFD93655.1;Note=identified by match to protein family HMM PF02021%3B match to protein family HMM TIGR00252;gbkey=CDS;locus_tag=HMPREF0889_1004;product=TIGR00252 family protein;protein_id=EFD93655.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 14698 16980 . - . ID=gene-HMPREF0889_1005;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1005 GCA_000177555.1|ADGP01000021.1 Genbank CDS 14698 16980 . - 0 ID=cds-EFD93656.1;Parent=gene-HMPREF0889_1005;Dbxref=NCBI_GP:EFD93656.1;Name=EFD93656.1;Note=identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371;gbkey=CDS;gene=metE;locus_tag=HMPREF0889_1005;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=EFD93656.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 17091 18002 . - . ID=gene-HMPREF0889_1006;Name=HMPREF0889_1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1006 GCA_000177555.1|ADGP01000021.1 Genbank CDS 17091 18002 . - 0 ID=cds-EFD93657.1;Parent=gene-HMPREF0889_1006;Dbxref=NCBI_GP:EFD93657.1;Name=EFD93657.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=HMPREF0889_1006;product=transcriptional regulator%2C LysR family;protein_id=EFD93657.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 18030 19751 . - . ID=gene-HMPREF0889_1007;Name=FbpA;gbkey=Gene;gene=FbpA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1007 GCA_000177555.1|ADGP01000021.1 Genbank CDS 18030 19751 . - 0 ID=cds-EFD93658.1;Parent=gene-HMPREF0889_1007;Dbxref=NCBI_GP:EFD93658.1;Name=EFD93658.1;Note=identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833;gbkey=CDS;gene=FbpA;locus_tag=HMPREF0889_1007;product=fibronectin-binding protein A domain protein;protein_id=EFD93658.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank sequence_feature 19954 20198 . + . ID=id-ADGP01000021.1:19954..20198;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000021.1 Genbank gene 20253 21974 . + . ID=gene-HMPREF0889_1009;Name=HMPREF0889_1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1009 GCA_000177555.1|ADGP01000021.1 Genbank CDS 20253 21974 . + 0 ID=cds-EFD93659.1;Parent=gene-HMPREF0889_1009;Dbxref=NCBI_GP:EFD93659.1;Name=EFD93659.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502;gbkey=CDS;locus_tag=HMPREF0889_1009;product=2-isopropylmalate synthase;protein_id=EFD93659.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 21987 23243 . + . ID=gene-HMPREF0889_1010;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1010 GCA_000177555.1|ADGP01000021.1 Genbank CDS 21987 23243 . + 0 ID=cds-EFD93660.1;Parent=gene-HMPREF0889_1010;Dbxref=NCBI_GP:EFD93660.1;Name=EFD93660.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02083%3B match to protein family HMM TIGR02086;gbkey=CDS;gene=leuC;locus_tag=HMPREF0889_1010;product=3-isopropylmalate dehydratase%2C large subunit;protein_id=EFD93660.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 23246 23764 . + . ID=gene-HMPREF0889_1011;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1011 GCA_000177555.1|ADGP01000021.1 Genbank CDS 23246 23764 . + 0 ID=cds-EFD93661.1;Parent=gene-HMPREF0889_1011;Dbxref=NCBI_GP:EFD93661.1;Name=EFD93661.1;Note=identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR02087;gbkey=CDS;gene=leuD;locus_tag=HMPREF0889_1011;product=3-isopropylmalate dehydratase small subunit;protein_id=EFD93661.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 23736 24800 . + . ID=gene-HMPREF0889_1012;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1012 GCA_000177555.1|ADGP01000021.1 Genbank CDS 23736 24800 . + 0 ID=cds-EFD93662.1;Parent=gene-HMPREF0889_1012;Dbxref=NCBI_GP:EFD93662.1;Name=EFD93662.1;Note=identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169;gbkey=CDS;gene=leuB;locus_tag=HMPREF0889_1012;product=3-isopropylmalate dehydrogenase;protein_id=EFD93662.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 24882 25037 . + . ID=gene-HMPREF0889_1013;Name=HMPREF0889_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1013 GCA_000177555.1|ADGP01000021.1 Genbank CDS 24882 25037 . + 0 ID=cds-EFD93663.1;Parent=gene-HMPREF0889_1013;Dbxref=NCBI_GP:EFD93663.1;Name=EFD93663.1;gbkey=CDS;locus_tag=HMPREF0889_1013;product=hypothetical protein;protein_id=EFD93663.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 25198 26379 . - . ID=gene-HMPREF0889_1014;Name=HMPREF0889_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1014 GCA_000177555.1|ADGP01000021.1 Genbank CDS 25198 26379 . - 0 ID=cds-EFD93664.1;Parent=gene-HMPREF0889_1014;Dbxref=NCBI_GP:EFD93664.1;Name=EFD93664.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF0889_1014;product=ATPase family associated with various cellular activities (AAA);protein_id=EFD93664.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 26340 27782 . - . ID=gene-HMPREF0889_1015;Name=HMPREF0889_1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1015 GCA_000177555.1|ADGP01000021.1 Genbank CDS 26340 27782 . - 0 ID=cds-EFD93665.1;Parent=gene-HMPREF0889_1015;Dbxref=NCBI_GP:EFD93665.1;Name=EFD93665.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861;gbkey=CDS;locus_tag=HMPREF0889_1015;product=ATPase%2C AAA family;protein_id=EFD93665.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 27997 28848 . + . ID=gene-HMPREF0889_1016;Name=HMPREF0889_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1016 GCA_000177555.1|ADGP01000021.1 Genbank CDS 27997 28848 . + 0 ID=cds-EFD93666.1;Parent=gene-HMPREF0889_1016;Dbxref=NCBI_GP:EFD93666.1;Name=EFD93666.1;Note=identified by match to protein family HMM PF08238;gbkey=CDS;locus_tag=HMPREF0889_1016;product=Sel1 repeat protein;protein_id=EFD93666.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 29020 29148 . + . ID=gene-HMPREF0889_1017;Name=HMPREF0889_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1017 GCA_000177555.1|ADGP01000021.1 Genbank CDS 29020 29148 . + 0 ID=cds-EFD93667.1;Parent=gene-HMPREF0889_1017;Dbxref=NCBI_GP:EFD93667.1;Name=EFD93667.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1017;product=hypothetical protein;protein_id=EFD93667.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 29179 30216 . + . ID=gene-HMPREF0889_1018;Name=HMPREF0889_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1018 GCA_000177555.1|ADGP01000021.1 Genbank CDS 29179 30216 . + 0 ID=cds-EFD93668.1;Parent=gene-HMPREF0889_1018;Dbxref=NCBI_GP:EFD93668.1;Name=EFD93668.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF0889_1018;product=ABC transporter%2C permease protein;protein_id=EFD93668.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 30183 31085 . + . ID=gene-HMPREF0889_1019;Name=HMPREF0889_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1019 GCA_000177555.1|ADGP01000021.1 Genbank CDS 30183 31085 . + 0 ID=cds-EFD93669.1;Parent=gene-HMPREF0889_1019;Dbxref=NCBI_GP:EFD93669.1;Name=EFD93669.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF0889_1019;product=ABC transporter%2C permease protein;protein_id=EFD93669.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 31109 32677 . + . ID=gene-HMPREF0889_1020;Name=HMPREF0889_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1020 GCA_000177555.1|ADGP01000021.1 Genbank CDS 31109 32677 . + 0 ID=cds-EFD93670.1;Parent=gene-HMPREF0889_1020;Dbxref=NCBI_GP:EFD93670.1;Name=EFD93670.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF0889_1020;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EFD93670.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 32670 33686 . + . ID=gene-HMPREF0889_1021;Name=HMPREF0889_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1021 GCA_000177555.1|ADGP01000021.1 Genbank CDS 32670 33686 . + 0 ID=cds-EFD93671.1;Parent=gene-HMPREF0889_1021;Dbxref=NCBI_GP:EFD93671.1;Name=EFD93671.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=HMPREF0889_1021;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93671.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 33679 34551 . + . ID=gene-HMPREF0889_1022;Name=HMPREF0889_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1022 GCA_000177555.1|ADGP01000021.1 Genbank CDS 33679 34551 . + 0 ID=cds-EFD93672.1;Parent=gene-HMPREF0889_1022;Dbxref=NCBI_GP:EFD93672.1;Name=EFD93672.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1022;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93672.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 34733 35683 . + . ID=gene-HMPREF0889_1023;Name=HMPREF0889_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1023 GCA_000177555.1|ADGP01000021.1 Genbank CDS 34733 35683 . + 0 ID=cds-EFD93673.1;Parent=gene-HMPREF0889_1023;Dbxref=NCBI_GP:EFD93673.1;Name=EFD93673.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF0889_1023;product=Heptosyltransferase;protein_id=EFD93673.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 35715 36758 . + . ID=gene-HMPREF0889_1024;Name=HMPREF0889_1024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1024 GCA_000177555.1|ADGP01000021.1 Genbank CDS 35715 36758 . + 0 ID=cds-EFD93674.1;Parent=gene-HMPREF0889_1024;Dbxref=NCBI_GP:EFD93674.1;Name=EFD93674.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF0889_1024;product=glycosyltransferase%2C group 2 family protein;protein_id=EFD93674.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 36787 36951 . + . ID=gene-HMPREF0889_1025;Name=HMPREF0889_1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1025 GCA_000177555.1|ADGP01000021.1 Genbank CDS 36787 36951 . + 0 ID=cds-EFD93675.1;Parent=gene-HMPREF0889_1025;Dbxref=NCBI_GP:EFD93675.1;Name=EFD93675.1;gbkey=CDS;locus_tag=HMPREF0889_1025;product=hypothetical protein;protein_id=EFD93675.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 36951 38960 . + . ID=gene-HMPREF0889_1026;Name=HMPREF0889_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1026 GCA_000177555.1|ADGP01000021.1 Genbank CDS 36951 38960 . + 0 ID=cds-EFD93676.1;Parent=gene-HMPREF0889_1026;Dbxref=NCBI_GP:EFD93676.1;Name=EFD93676.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF0889_1026;product=arylsulfatase;protein_id=EFD93676.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 39649 40620 . + . ID=gene-HMPREF0889_1027;Name=HMPREF0889_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1027 GCA_000177555.1|ADGP01000021.1 Genbank CDS 39649 40620 . + 0 ID=cds-EFD93677.1;Parent=gene-HMPREF0889_1027;Dbxref=NCBI_GP:EFD93677.1;Name=EFD93677.1;Note=identified by match to protein family HMM PF06725%3B match to protein family HMM PF07501;gbkey=CDS;locus_tag=HMPREF0889_1027;product=3D domain protein;protein_id=EFD93677.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 40772 40848 . - . ID=gene-HMPREF0889_1028;Name=HMPREF0889_1028;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1028 GCA_000177555.1|ADGP01000021.1 Genbank tRNA 40772 40848 . - . ID=rna-HMPREF0889_1028;Parent=gene-HMPREF0889_1028;gbkey=tRNA;locus_tag=HMPREF0889_1028;product=tRNA-Arg GCA_000177555.1|ADGP01000021.1 Genbank exon 40772 40848 . - . ID=exon-HMPREF0889_1028-1;Parent=rna-HMPREF0889_1028;gbkey=tRNA;locus_tag=HMPREF0889_1028;product=tRNA-Arg GCA_000177555.1|ADGP01000021.1 Genbank gene 40857 40930 . - . ID=gene-HMPREF0889_1029;Name=HMPREF0889_1029;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1029 GCA_000177555.1|ADGP01000021.1 Genbank tRNA 40857 40930 . - . ID=rna-HMPREF0889_1029;Parent=gene-HMPREF0889_1029;gbkey=tRNA;locus_tag=HMPREF0889_1029;product=tRNA-Gly GCA_000177555.1|ADGP01000021.1 Genbank exon 40857 40930 . - . ID=exon-HMPREF0889_1029-1;Parent=rna-HMPREF0889_1029;gbkey=tRNA;locus_tag=HMPREF0889_1029;product=tRNA-Gly GCA_000177555.1|ADGP01000021.1 Genbank gene 40941 41017 . - . ID=gene-HMPREF0889_1030;Name=HMPREF0889_1030;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1030 GCA_000177555.1|ADGP01000021.1 Genbank tRNA 40941 41017 . - . ID=rna-HMPREF0889_1030;Parent=gene-HMPREF0889_1030;gbkey=tRNA;locus_tag=HMPREF0889_1030;product=tRNA-Pro GCA_000177555.1|ADGP01000021.1 Genbank exon 40941 41017 . - . ID=exon-HMPREF0889_1030-1;Parent=rna-HMPREF0889_1030;gbkey=tRNA;locus_tag=HMPREF0889_1030;product=tRNA-Pro GCA_000177555.1|ADGP01000021.1 Genbank gene 41026 41145 . + . ID=gene-HMPREF0889_1031;Name=HMPREF0889_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1031 GCA_000177555.1|ADGP01000021.1 Genbank CDS 41026 41145 . + 0 ID=cds-EFD93678.1;Parent=gene-HMPREF0889_1031;Dbxref=NCBI_GP:EFD93678.1;Name=EFD93678.1;gbkey=CDS;locus_tag=HMPREF0889_1031;product=hypothetical protein;protein_id=EFD93678.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 41409 42824 . + . ID=gene-HMPREF0889_1032;Name=HMPREF0889_1032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1032 GCA_000177555.1|ADGP01000021.1 Genbank CDS 41409 42824 . + 0 ID=cds-EFD93679.1;Parent=gene-HMPREF0889_1032;Dbxref=NCBI_GP:EFD93679.1;Name=EFD93679.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_1032;product=hypothetical protein;protein_id=EFD93679.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 43159 44592 . + . ID=gene-HMPREF0889_1033;Name=HMPREF0889_1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1033 GCA_000177555.1|ADGP01000021.1 Genbank CDS 43159 44592 . + 0 ID=cds-EFD93680.1;Parent=gene-HMPREF0889_1033;Dbxref=NCBI_GP:EFD93680.1;Name=EFD93680.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_1033;product=hypothetical protein;protein_id=EFD93680.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 44923 46401 . + . ID=gene-HMPREF0889_1034;Name=HMPREF0889_1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1034 GCA_000177555.1|ADGP01000021.1 Genbank CDS 44923 46401 . + 0 ID=cds-EFD93681.1;Parent=gene-HMPREF0889_1034;Dbxref=NCBI_GP:EFD93681.1;Name=EFD93681.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_1034;product=hypothetical protein;protein_id=EFD93681.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 46745 48181 . + . ID=gene-HMPREF0889_1035;Name=HMPREF0889_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1035 GCA_000177555.1|ADGP01000021.1 Genbank CDS 46745 48181 . + 0 ID=cds-EFD93682.1;Parent=gene-HMPREF0889_1035;Dbxref=NCBI_GP:EFD93682.1;Name=EFD93682.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_1035;product=hypothetical protein;protein_id=EFD93682.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 48342 49268 . + . ID=gene-HMPREF0889_1036;Name=HMPREF0889_1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1036 GCA_000177555.1|ADGP01000021.1 Genbank CDS 48342 49268 . + 0 ID=cds-EFD93683.1;Parent=gene-HMPREF0889_1036;Dbxref=NCBI_GP:EFD93683.1;Name=EFD93683.1;Note=identified by match to protein family HMM PF02492;gbkey=CDS;locus_tag=HMPREF0889_1036;product=CobW/P47K family protein;protein_id=EFD93683.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 49265 50860 . + . ID=gene-HMPREF0889_1037;Name=HMPREF0889_1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1037 GCA_000177555.1|ADGP01000021.1 Genbank CDS 49265 50860 . + 0 ID=cds-EFD93684.1;Parent=gene-HMPREF0889_1037;Dbxref=NCBI_GP:EFD93684.1;Name=EFD93684.1;Note=identified by match to protein family HMM PF03773;gbkey=CDS;locus_tag=HMPREF0889_1037;product=putative permease;protein_id=EFD93684.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 50861 51604 . + . ID=gene-HMPREF0889_1038;Name=HMPREF0889_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1038 GCA_000177555.1|ADGP01000021.1 Genbank CDS 50861 51604 . + 0 ID=cds-EFD93685.1;Parent=gene-HMPREF0889_1038;Dbxref=NCBI_GP:EFD93685.1;Name=EFD93685.1;gbkey=CDS;locus_tag=HMPREF0889_1038;product=TIGR03943 family protein;protein_id=EFD93685.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 51673 51876 . + . ID=gene-HMPREF0889_1039;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1039 GCA_000177555.1|ADGP01000021.1 Genbank CDS 51673 51876 . + 0 ID=cds-EFD93686.1;Parent=gene-HMPREF0889_1039;Dbxref=NCBI_GP:EFD93686.1;Name=EFD93686.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;gene=tatA;locus_tag=HMPREF0889_1039;product=twin arginine-targeting protein translocase%2C TatA/E family;protein_id=EFD93686.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 51876 52388 . + . ID=gene-HMPREF0889_1040;Name=HMPREF0889_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1040 GCA_000177555.1|ADGP01000021.1 Genbank CDS 51876 52388 . + 0 ID=cds-EFD93687.1;Parent=gene-HMPREF0889_1040;Dbxref=NCBI_GP:EFD93687.1;Name=EFD93687.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;locus_tag=HMPREF0889_1040;product=6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein;protein_id=EFD93687.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 52494 53186 . - . ID=gene-HMPREF0889_1041;Name=HMPREF0889_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1041 GCA_000177555.1|ADGP01000021.1 Genbank CDS 52494 53186 . - 0 ID=cds-EFD93688.1;Parent=gene-HMPREF0889_1041;Dbxref=NCBI_GP:EFD93688.1;Name=EFD93688.1;Note=identified by match to protein family HMM PF04402;gbkey=CDS;locus_tag=HMPREF0889_1041;product=hypothetical protein;protein_id=EFD93688.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank binding_site 53313 53410 . + . ID=id-ADGP01000021.1:53313..53410;Note=TPP riboswitch (THI element)%3B Rfam score 66.34;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 GCA_000177555.1|ADGP01000021.1 Genbank gene 53467 54768 . + . ID=gene-HMPREF0889_1043;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1043 GCA_000177555.1|ADGP01000021.1 Genbank CDS 53467 54768 . + 0 ID=cds-EFD93689.1;Parent=gene-HMPREF0889_1043;Dbxref=NCBI_GP:EFD93689.1;Name=EFD93689.1;Note=identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190;gbkey=CDS;gene=thiC;locus_tag=HMPREF0889_1043;product=thiamine biosynthesis protein ThiC;protein_id=EFD93689.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 55216 58890 . + . ID=gene-HMPREF0889_1044;Name=HMPREF0889_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1044 GCA_000177555.1|ADGP01000021.1 Genbank CDS 55216 58890 . + 0 ID=cds-EFD93690.1;Parent=gene-HMPREF0889_1044;Dbxref=NCBI_GP:EFD93690.1;Name=EFD93690.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_1044;product=Hep/Hag repeat protein;protein_id=EFD93690.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 59071 59412 . + . ID=gene-HMPREF0889_1045;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1045 GCA_000177555.1|ADGP01000021.1 Genbank CDS 59071 59412 . + 0 ID=cds-EFD93691.1;Parent=gene-HMPREF0889_1045;Dbxref=NCBI_GP:EFD93691.1;Name=EFD93691.1;Note=identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024;gbkey=CDS;gene=rplS;locus_tag=HMPREF0889_1045;product=ribosomal protein L19;protein_id=EFD93691.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 59468 59791 . - . ID=gene-HMPREF0889_1046;Name=HMPREF0889_1046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1046 GCA_000177555.1|ADGP01000021.1 Genbank CDS 59468 59791 . - 0 ID=cds-EFD93692.1;Parent=gene-HMPREF0889_1046;Dbxref=NCBI_GP:EFD93692.1;Name=EFD93692.1;Note=identified by match to protein family HMM PF02694;gbkey=CDS;locus_tag=HMPREF0889_1046;product=hypothetical protein;protein_id=EFD93692.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 60001 62463 . + . ID=gene-HMPREF0889_1047;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1047 GCA_000177555.1|ADGP01000021.1 Genbank CDS 60001 62463 . + 0 ID=cds-EFD93693.1;Parent=gene-HMPREF0889_1047;Dbxref=NCBI_GP:EFD93693.1;Name=EFD93693.1;Note=identified by match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;locus_tag=HMPREF0889_1047;product=preprotein translocase%2C SecA subunit;protein_id=EFD93693.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 62644 63702 . + . ID=gene-HMPREF0889_1048;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1048 GCA_000177555.1|ADGP01000021.1 Genbank CDS 62644 63702 . + 0 ID=cds-EFD93694.1;Parent=gene-HMPREF0889_1048;Dbxref=NCBI_GP:EFD93694.1;Name=EFD93694.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020;gbkey=CDS;gene=prfB;locus_tag=HMPREF0889_1048;product=peptide chain release factor 2;protein_id=EFD93694.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 63756 65810 . + . ID=gene-HMPREF0889_1049;Name=HMPREF0889_1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1049 GCA_000177555.1|ADGP01000021.1 Genbank CDS 63756 65810 . + 0 ID=cds-EFD93695.1;Parent=gene-HMPREF0889_1049;Dbxref=NCBI_GP:EFD93695.1;Name=EFD93695.1;gbkey=CDS;locus_tag=HMPREF0889_1049;product=hypothetical protein;protein_id=EFD93695.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 65803 66936 . + . ID=gene-HMPREF0889_1050;Name=csaB;gbkey=Gene;gene=csaB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1050 GCA_000177555.1|ADGP01000021.1 Genbank CDS 65803 66936 . + 0 ID=cds-EFD93696.1;Parent=gene-HMPREF0889_1050;Dbxref=NCBI_GP:EFD93696.1;Name=EFD93696.1;Note=identified by match to protein family HMM PF04230%3B match to protein family HMM TIGR03609;gbkey=CDS;gene=csaB;locus_tag=HMPREF0889_1050;product=polysaccharide pyruvyl transferase CsaB;protein_id=EFD93696.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 66965 67651 . + . ID=gene-HMPREF0889_1051;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1051 GCA_000177555.1|ADGP01000021.1 Genbank CDS 66965 67651 . + 0 ID=cds-EFD93697.1;Parent=gene-HMPREF0889_1051;Dbxref=NCBI_GP:EFD93697.1;Name=EFD93697.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673;gbkey=CDS;gene=ftsE;locus_tag=HMPREF0889_1051;product=cell division ATP-binding protein FtsE;protein_id=EFD93697.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 67617 68519 . + . ID=gene-HMPREF0889_1052;Name=HMPREF0889_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1052 GCA_000177555.1|ADGP01000021.1 Genbank CDS 67617 68519 . + 0 ID=cds-EFD93698.1;Parent=gene-HMPREF0889_1052;Dbxref=NCBI_GP:EFD93698.1;Name=EFD93698.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF0889_1052;product=efflux ABC transporter%2C permease protein;protein_id=EFD93698.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 68523 69770 . + . ID=gene-HMPREF0889_1053;Name=HMPREF0889_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1053 GCA_000177555.1|ADGP01000021.1 Genbank CDS 68523 69770 . + 0 ID=cds-EFD93699.1;Parent=gene-HMPREF0889_1053;Dbxref=NCBI_GP:EFD93699.1;Name=EFD93699.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF0889_1053;product=peptidase%2C M23 family;protein_id=EFD93699.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 69781 71052 . + . ID=gene-HMPREF0889_1054;Name=HMPREF0889_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1054 GCA_000177555.1|ADGP01000021.1 Genbank CDS 69781 71052 . + 0 ID=cds-EFD93700.1;Parent=gene-HMPREF0889_1054;Dbxref=NCBI_GP:EFD93700.1;Name=EFD93700.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225;gbkey=CDS;locus_tag=HMPREF0889_1054;product=peptidase%2C S41 family;protein_id=EFD93700.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 71218 72765 . + . ID=gene-HMPREF0889_1055;Name=HMPREF0889_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1055 GCA_000177555.1|ADGP01000021.1 Genbank CDS 71218 72765 . + 0 ID=cds-EFD93701.1;Parent=gene-HMPREF0889_1055;Dbxref=NCBI_GP:EFD93701.1;Name=EFD93701.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;locus_tag=HMPREF0889_1055;product=putative gluconokinase;protein_id=EFD93701.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 72788 74197 . + . ID=gene-HMPREF0889_1056;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=HMPREF0889_1056 GCA_000177555.1|ADGP01000021.1 Genbank CDS 72788 74197 . + 0 ID=cds-EFD93702.1;Parent=gene-HMPREF0889_1056;Dbxref=NCBI_GP:EFD93702.1;Name=EFD93702.1;Note=identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873;gbkey=CDS;gene=gnd;locus_tag=HMPREF0889_1056;product=phosphogluconate dehydrogenase (decarboxylating);protein_id=EFD93702.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 74224 75096 . + . ID=gene-HMPREF0889_1057;Name=HMPREF0889_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1057 GCA_000177555.1|ADGP01000021.1 Genbank CDS 74224 75096 . + 0 ID=cds-EFD93703.1;Parent=gene-HMPREF0889_1057;Dbxref=NCBI_GP:EFD93703.1;Name=EFD93703.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;locus_tag=HMPREF0889_1057;product=transcriptional regulator%2C RpiR family;protein_id=EFD93703.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 75194 75820 . + . ID=gene-HMPREF0889_1058;Name=HMPREF0889_1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1058 GCA_000177555.1|ADGP01000021.1 Genbank CDS 75194 75820 . + 0 ID=cds-EFD93704.1;Parent=gene-HMPREF0889_1058;Dbxref=NCBI_GP:EFD93704.1;Name=EFD93704.1;Note=identified by match to protein family HMM PF02163;gbkey=CDS;locus_tag=HMPREF0889_1058;product=peptidase%2C M50 family;protein_id=EFD93704.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 75832 76371 . + . ID=gene-HMPREF0889_1059;Name=HMPREF0889_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1059 GCA_000177555.1|ADGP01000021.1 Genbank CDS 75832 76371 . + 0 ID=cds-EFD93705.1;Parent=gene-HMPREF0889_1059;Dbxref=NCBI_GP:EFD93705.1;Name=EFD93705.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1059;product=hypothetical protein;protein_id=EFD93705.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 76466 77317 . + . ID=gene-HMPREF0889_1060;Name=HMPREF0889_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1060 GCA_000177555.1|ADGP01000021.1 Genbank CDS 76466 77317 . + 0 ID=cds-EFD93706.1;Parent=gene-HMPREF0889_1060;Dbxref=NCBI_GP:EFD93706.1;Name=EFD93706.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;locus_tag=HMPREF0889_1060;product=peptidase%2C M48 family;protein_id=EFD93706.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 77484 79220 . + . ID=gene-HMPREF0889_1061;Name=ade;gbkey=Gene;gene=ade;gene_biotype=protein_coding;locus_tag=HMPREF0889_1061 GCA_000177555.1|ADGP01000021.1 Genbank CDS 77484 79220 . + 0 ID=cds-EFD93707.1;Parent=gene-HMPREF0889_1061;Dbxref=NCBI_GP:EFD93707.1;Name=EFD93707.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01178;gbkey=CDS;gene=ade;locus_tag=HMPREF0889_1061;product=adenine deaminase;protein_id=EFD93707.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 79245 80357 . + . ID=gene-HMPREF0889_1062;Name=HMPREF0889_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1062 GCA_000177555.1|ADGP01000021.1 Genbank CDS 79245 80357 . + 0 ID=cds-EFD93708.1;Parent=gene-HMPREF0889_1062;Dbxref=NCBI_GP:EFD93708.1;Name=EFD93708.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF0889_1062;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFD93708.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 80415 80582 . + . ID=gene-HMPREF0889_1063;Name=HMPREF0889_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1063 GCA_000177555.1|ADGP01000021.1 Genbank CDS 80415 80582 . + 0 ID=cds-EFD93709.1;Parent=gene-HMPREF0889_1063;Dbxref=NCBI_GP:EFD93709.1;Name=EFD93709.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1063;product=hypothetical protein;protein_id=EFD93709.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 80723 82699 . + . ID=gene-HMPREF0889_1064;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1064 GCA_000177555.1|ADGP01000021.1 Genbank CDS 80723 82699 . + 0 ID=cds-EFD93710.1;Parent=gene-HMPREF0889_1064;Dbxref=NCBI_GP:EFD93710.1;Name=EFD93710.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644;gbkey=CDS;gene=recJ;locus_tag=HMPREF0889_1064;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=EFD93710.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 82713 84914 . + . ID=gene-HMPREF0889_1065;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1065 GCA_000177555.1|ADGP01000021.1 Genbank CDS 82713 84914 . + 0 ID=cds-EFD93711.1;Parent=gene-HMPREF0889_1065;Dbxref=NCBI_GP:EFD93711.1;Name=EFD93711.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;gene=relA;locus_tag=HMPREF0889_1065;product=RelA/SpoT family protein;protein_id=EFD93711.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 84911 85360 . + . ID=gene-HMPREF0889_1066;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=HMPREF0889_1066 GCA_000177555.1|ADGP01000021.1 Genbank CDS 84911 85360 . + 0 ID=cds-EFD93712.1;Parent=gene-HMPREF0889_1066;Dbxref=NCBI_GP:EFD93712.1;Name=EFD93712.1;Note=identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256;gbkey=CDS;gene=dtd;locus_tag=HMPREF0889_1066;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=EFD93712.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 85391 86032 . + . ID=gene-HMPREF0889_1067;Name=HMPREF0889_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1067 GCA_000177555.1|ADGP01000021.1 Genbank CDS 85391 86032 . + 0 ID=cds-EFD93713.1;Parent=gene-HMPREF0889_1067;Dbxref=NCBI_GP:EFD93713.1;Name=EFD93713.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF0889_1067;product=metallo-beta-lactamase domain protein;protein_id=EFD93713.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 86036 87115 . + . ID=gene-HMPREF0889_1068;Name=HMPREF0889_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1068 GCA_000177555.1|ADGP01000021.1 Genbank CDS 86036 87115 . + 0 ID=cds-EFD93714.1;Parent=gene-HMPREF0889_1068;Dbxref=NCBI_GP:EFD93714.1;Name=EFD93714.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;locus_tag=HMPREF0889_1068;product=hypothetical protein;protein_id=EFD93714.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 87102 87617 . + . ID=gene-HMPREF0889_1069;Name=HMPREF0889_1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1069 GCA_000177555.1|ADGP01000021.1 Genbank CDS 87102 87617 . + 0 ID=cds-EFD93715.1;Parent=gene-HMPREF0889_1069;Dbxref=NCBI_GP:EFD93715.1;Name=EFD93715.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF0889_1069;product=transcriptional regulator%2C Fur family;protein_id=EFD93715.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 87610 89061 . + . ID=gene-HMPREF0889_1070;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1070 GCA_000177555.1|ADGP01000021.1 Genbank CDS 87610 89061 . + 0 ID=cds-EFD93716.1;Parent=gene-HMPREF0889_1070;Dbxref=NCBI_GP:EFD93716.1;Name=EFD93716.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;gene=hemZ;locus_tag=HMPREF0889_1070;product=coproporphyrinogen dehydrogenase HemZ;protein_id=EFD93716.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 89061 90329 . + . ID=gene-HMPREF0889_1071;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1071 GCA_000177555.1|ADGP01000021.1 Genbank CDS 89061 90329 . + 0 ID=cds-EFD93717.1;Parent=gene-HMPREF0889_1071;Dbxref=NCBI_GP:EFD93717.1;Name=EFD93717.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442;gbkey=CDS;gene=hisS;locus_tag=HMPREF0889_1071;product=histidine--tRNA ligase;protein_id=EFD93717.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 90333 92126 . + . ID=gene-HMPREF0889_1072;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1072 GCA_000177555.1|ADGP01000021.1 Genbank CDS 90333 92126 . + 0 ID=cds-EFD93718.1;Parent=gene-HMPREF0889_1072;Dbxref=NCBI_GP:EFD93718.1;Name=EFD93718.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459;gbkey=CDS;gene=aspS;locus_tag=HMPREF0889_1072;product=aspartate--tRNA ligase;protein_id=EFD93718.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 92230 92790 . + . ID=gene-HMPREF0889_1073;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1073 GCA_000177555.1|ADGP01000021.1 Genbank CDS 92230 92790 . + 0 ID=cds-EFD93719.1;Parent=gene-HMPREF0889_1073;Dbxref=NCBI_GP:EFD93719.1;Name=EFD93719.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB;locus_tag=HMPREF0889_1073;product=signal peptidase I;protein_id=EFD93719.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 92926 93456 . + . ID=gene-HMPREF0889_1074;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1074 GCA_000177555.1|ADGP01000021.1 Genbank CDS 92926 93456 . + 0 ID=cds-EFD93720.1;Parent=gene-HMPREF0889_1074;Dbxref=NCBI_GP:EFD93720.1;Name=EFD93720.1;Note=identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139;gbkey=CDS;gene=queF;locus_tag=HMPREF0889_1074;product=preQ(1) synthase;protein_id=EFD93720.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 93520 93891 . + . ID=gene-HMPREF0889_1075;Name=HMPREF0889_1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1075 GCA_000177555.1|ADGP01000021.1 Genbank CDS 93520 93891 . + 0 ID=cds-EFD93721.1;Parent=gene-HMPREF0889_1075;Dbxref=NCBI_GP:EFD93721.1;Name=EFD93721.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1075;product=hypothetical protein;protein_id=EFD93721.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 93960 94604 . + . ID=gene-HMPREF0889_1076;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=HMPREF0889_1076 GCA_000177555.1|ADGP01000021.1 Genbank CDS 93960 94604 . + 0 ID=cds-EFD93722.1;Parent=gene-HMPREF0889_1076;Dbxref=NCBI_GP:EFD93722.1;Name=EFD93722.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083;gbkey=CDS;gene=nth;locus_tag=HMPREF0889_1076;product=endonuclease III;protein_id=EFD93722.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 94728 95123 . + . ID=gene-HMPREF0889_1077;Name=HMPREF0889_1077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1077 GCA_000177555.1|ADGP01000021.1 Genbank CDS 94728 95123 . + 0 ID=cds-EFD93723.1;Parent=gene-HMPREF0889_1077;Dbxref=NCBI_GP:EFD93723.1;Name=EFD93723.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1077;product=hypothetical protein;protein_id=EFD93723.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 95204 95590 . + . ID=gene-HMPREF0889_1078;Name=HMPREF0889_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1078 GCA_000177555.1|ADGP01000021.1 Genbank CDS 95204 95590 . + 0 ID=cds-EFD93724.1;Parent=gene-HMPREF0889_1078;Dbxref=NCBI_GP:EFD93724.1;Name=EFD93724.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;locus_tag=HMPREF0889_1078;product=putative endoribonuclease L-PSP;protein_id=EFD93724.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 95697 97292 . - . ID=gene-HMPREF0889_1079;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1079 GCA_000177555.1|ADGP01000021.1 Genbank CDS 95697 97292 . - 0 ID=cds-EFD93725.1;Parent=gene-HMPREF0889_1079;Dbxref=NCBI_GP:EFD93725.1;Name=EFD93725.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00503;gbkey=CDS;gene=prfC;locus_tag=HMPREF0889_1079;product=peptide chain release factor 3;protein_id=EFD93725.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 97533 97967 . + . ID=gene-HMPREF0889_1080;Name=HMPREF0889_1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1080 GCA_000177555.1|ADGP01000021.1 Genbank CDS 97533 97967 . + 0 ID=cds-EFD93726.1;Parent=gene-HMPREF0889_1080;Dbxref=NCBI_GP:EFD93726.1;Name=EFD93726.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF0889_1080;product=putative iron-responsive transcriptional regulator;protein_id=EFD93726.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 98075 98218 . + . ID=gene-HMPREF0889_1081;Name=HMPREF0889_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1081 GCA_000177555.1|ADGP01000021.1 Genbank CDS 98075 98218 . + 0 ID=cds-EFD93727.1;Parent=gene-HMPREF0889_1081;Dbxref=NCBI_GP:EFD93727.1;Name=EFD93727.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1081;product=hypothetical protein;protein_id=EFD93727.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 98339 99526 . + . ID=gene-HMPREF0889_1082;Name=HMPREF0889_1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1082 GCA_000177555.1|ADGP01000021.1 Genbank CDS 98339 99526 . + 0 ID=cds-EFD93728.1;Parent=gene-HMPREF0889_1082;Dbxref=NCBI_GP:EFD93728.1;Name=EFD93728.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_1082;product=aminotransferase%2C class I/II;protein_id=EFD93728.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 99600 101414 . + . ID=gene-HMPREF0889_1083;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1083 GCA_000177555.1|ADGP01000021.1 Genbank CDS 99600 101414 . + 0 ID=cds-EFD93729.1;Parent=gene-HMPREF0889_1083;Dbxref=NCBI_GP:EFD93729.1;Name=EFD93729.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389;gbkey=CDS;gene=recQ;locus_tag=HMPREF0889_1083;product=ATP-dependent DNA helicase RecQ;protein_id=EFD93729.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 101407 102198 . + . ID=gene-HMPREF0889_1084;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1084 GCA_000177555.1|ADGP01000021.1 Genbank CDS 101407 102198 . + 0 ID=cds-EFD93730.1;Parent=gene-HMPREF0889_1084;Dbxref=NCBI_GP:EFD93730.1;Name=EFD93730.1;Note=identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284;gbkey=CDS;gene=thyA;locus_tag=HMPREF0889_1084;product=thymidylate synthase;protein_id=EFD93730.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 102198 102695 . + . ID=gene-HMPREF0889_1085;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1085 GCA_000177555.1|ADGP01000021.1 Genbank CDS 102198 102695 . + 0 ID=cds-EFD93731.1;Parent=gene-HMPREF0889_1085;Dbxref=NCBI_GP:EFD93731.1;Name=EFD93731.1;Note=identified by match to protein family HMM PF00186;gbkey=CDS;gene=folA;locus_tag=HMPREF0889_1085;product=dihydrofolate reductase;protein_id=EFD93731.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 102831 103028 . + . ID=gene-HMPREF0889_1086;Name=HMPREF0889_1086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1086 GCA_000177555.1|ADGP01000021.1 Genbank CDS 102831 103028 . + 0 ID=cds-EFD93732.1;Parent=gene-HMPREF0889_1086;Dbxref=NCBI_GP:EFD93732.1;Name=EFD93732.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;locus_tag=HMPREF0889_1086;product=cold-shock DNA-binding domain protein;protein_id=EFD93732.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 103197 103415 . + . ID=gene-HMPREF0889_1087;Name=HMPREF0889_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1087 GCA_000177555.1|ADGP01000021.1 Genbank CDS 103197 103415 . + 0 ID=cds-EFD93733.1;Parent=gene-HMPREF0889_1087;Dbxref=NCBI_GP:EFD93733.1;Name=EFD93733.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts;gbkey=CDS;locus_tag=HMPREF0889_1087;product=hypothetical protein;protein_id=EFD93733.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 103474 105405 . + . ID=gene-HMPREF0889_1088;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1088 GCA_000177555.1|ADGP01000021.1 Genbank CDS 103474 105405 . + 0 ID=cds-EFD93734.1;Parent=gene-HMPREF0889_1088;Dbxref=NCBI_GP:EFD93734.1;Name=EFD93734.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=cadA;locus_tag=HMPREF0889_1088;product=cadmium-exporting ATPase;protein_id=EFD93734.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 105597 106943 . + . ID=gene-HMPREF0889_1089;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1089 GCA_000177555.1|ADGP01000021.1 Genbank CDS 105597 106943 . + 0 ID=cds-EFD93735.1;Parent=gene-HMPREF0889_1089;Dbxref=NCBI_GP:EFD93735.1;Name=EFD93735.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;gene=trkA;locus_tag=HMPREF0889_1089;product=potassium transporter peripheral membrane component;protein_id=EFD93735.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 106945 107835 . + . ID=gene-HMPREF0889_1090;Name=HMPREF0889_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1090 GCA_000177555.1|ADGP01000021.1 Genbank CDS 106945 107835 . + 0 ID=cds-EFD93736.1;Parent=gene-HMPREF0889_1090;Dbxref=NCBI_GP:EFD93736.1;Name=EFD93736.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_1090;product=hypothetical protein;protein_id=EFD93736.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 107826 108392 . + . ID=gene-HMPREF0889_1091;Name=HMPREF0889_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1091 GCA_000177555.1|ADGP01000021.1 Genbank CDS 107826 108392 . + 0 ID=cds-EFD93737.1;Parent=gene-HMPREF0889_1091;Dbxref=NCBI_GP:EFD93737.1;Name=EFD93737.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1091;product=hypothetical protein;protein_id=EFD93737.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 108401 109855 . + . ID=gene-HMPREF0889_1092;Name=HMPREF0889_1092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1092 GCA_000177555.1|ADGP01000021.1 Genbank CDS 108401 109855 . + 0 ID=cds-EFD93738.1;Parent=gene-HMPREF0889_1092;Dbxref=NCBI_GP:EFD93738.1;Name=EFD93738.1;Note=identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=HMPREF0889_1092;product=cation transport protein;protein_id=EFD93738.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 110002 110538 . + . ID=gene-HMPREF0889_1093;Name=HMPREF0889_1093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1093 GCA_000177555.1|ADGP01000021.1 Genbank CDS 110002 110538 . + 0 ID=cds-EFD93739.1;Parent=gene-HMPREF0889_1093;Dbxref=NCBI_GP:EFD93739.1;Name=EFD93739.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426;gbkey=CDS;locus_tag=HMPREF0889_1093;product=comEA protein;protein_id=EFD93739.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 110535 112655 . + . ID=gene-HMPREF0889_1094;Name=HMPREF0889_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1094 GCA_000177555.1|ADGP01000021.1 Genbank CDS 110535 112655 . + 0 ID=cds-EFD93740.1;Parent=gene-HMPREF0889_1094;Dbxref=NCBI_GP:EFD93740.1;Name=EFD93740.1;Note=identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360;gbkey=CDS;locus_tag=HMPREF0889_1094;product=ComEC/Rec2-like protein;protein_id=EFD93740.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 112652 113665 . + . ID=gene-HMPREF0889_1095;Name=HMPREF0889_1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1095 GCA_000177555.1|ADGP01000021.1 Genbank CDS 112652 113665 . + 0 ID=cds-EFD93741.1;Parent=gene-HMPREF0889_1095;Dbxref=NCBI_GP:EFD93741.1;Name=EFD93741.1;Note=identified by match to protein family HMM PF06144;gbkey=CDS;locus_tag=HMPREF0889_1095;product=DNA polymerase III%2C delta subunit;protein_id=EFD93741.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 113697 117296 . + . ID=gene-HMPREF0889_1096;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1096 GCA_000177555.1|ADGP01000021.1 Genbank CDS 113697 117296 . + 0 ID=cds-EFD93742.1;Parent=gene-HMPREF0889_1096;Dbxref=NCBI_GP:EFD93742.1;Name=EFD93742.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR01405;gbkey=CDS;gene=polC;locus_tag=HMPREF0889_1096;product=DNA polymerase III%2C alpha subunit%2C Gram-positive type;protein_id=EFD93742.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 117379 117711 . + . ID=gene-HMPREF0889_1097;Name=HMPREF0889_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1097 GCA_000177555.1|ADGP01000021.1 Genbank CDS 117379 117711 . + 0 ID=cds-EFD93743.1;Parent=gene-HMPREF0889_1097;Dbxref=NCBI_GP:EFD93743.1;Name=EFD93743.1;Note=identified by match to protein family HMM PF01371%3B match to protein family HMM TIGR02531;gbkey=CDS;locus_tag=HMPREF0889_1097;product=TrpR family protein YerC/YecD;protein_id=EFD93743.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 117794 118333 . + . ID=gene-HMPREF0889_1098;Name=HMPREF0889_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1098 GCA_000177555.1|ADGP01000021.1 Genbank CDS 117794 118333 . + 0 ID=cds-EFD93744.1;Parent=gene-HMPREF0889_1098;Dbxref=NCBI_GP:EFD93744.1;Name=EFD93744.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1098;product=hypothetical protein;protein_id=EFD93744.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 118422 119246 . + . ID=gene-HMPREF0889_1099;Name=HMPREF0889_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1099 GCA_000177555.1|ADGP01000021.1 Genbank CDS 118422 119246 . + 0 ID=cds-EFD93745.1;Parent=gene-HMPREF0889_1099;Dbxref=NCBI_GP:EFD93745.1;Name=EFD93745.1;Note=identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159;gbkey=CDS;locus_tag=HMPREF0889_1099;product=TIGR00159 family protein;protein_id=EFD93745.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 119246 120160 . + . ID=gene-HMPREF0889_1100;Name=HMPREF0889_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1100 GCA_000177555.1|ADGP01000021.1 Genbank CDS 119246 120160 . + 0 ID=cds-EFD93746.1;Parent=gene-HMPREF0889_1100;Dbxref=NCBI_GP:EFD93746.1;Name=EFD93746.1;Note=identified by match to protein family HMM PF07949;gbkey=CDS;locus_tag=HMPREF0889_1100;product=YbbR-like protein;protein_id=EFD93746.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 120174 121781 . + . ID=gene-HMPREF0889_1101;Name=HMPREF0889_1101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1101 GCA_000177555.1|ADGP01000021.1 Genbank CDS 120174 121781 . + 0 ID=cds-EFD93747.1;Parent=gene-HMPREF0889_1101;Dbxref=NCBI_GP:EFD93747.1;Name=EFD93747.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;locus_tag=HMPREF0889_1101;product=FAD dependent oxidoreductase;protein_id=EFD93747.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 121774 123129 . + . ID=gene-HMPREF0889_1102;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF0889_1102 GCA_000177555.1|ADGP01000021.1 Genbank CDS 121774 123129 . + 0 ID=cds-EFD93748.1;Parent=gene-HMPREF0889_1102;Dbxref=NCBI_GP:EFD93748.1;Name=EFD93748.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455;gbkey=CDS;gene=glmM;locus_tag=HMPREF0889_1102;product=phosphoglucosamine mutase;protein_id=EFD93748.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 123224 123367 . + . ID=gene-HMPREF0889_1103;Name=HMPREF0889_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1103 GCA_000177555.1|ADGP01000021.1 Genbank CDS 123224 123367 . + 0 ID=cds-EFD93749.1;Parent=gene-HMPREF0889_1103;Dbxref=NCBI_GP:EFD93749.1;Name=EFD93749.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1103;product=hypothetical protein;protein_id=EFD93749.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 123414 125243 . + . ID=gene-HMPREF0889_1104;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1104 GCA_000177555.1|ADGP01000021.1 Genbank CDS 123414 125243 . + 0 ID=cds-EFD93750.1;Parent=gene-HMPREF0889_1104;Dbxref=NCBI_GP:EFD93750.1;Name=EFD93750.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;locus_tag=HMPREF0889_1104;product=glutamine-fructose-6-phosphate transaminase (isomerizing);protein_id=EFD93750.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 125449 126183 . + . ID=gene-HMPREF0889_1105;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1105 GCA_000177555.1|ADGP01000021.1 Genbank CDS 125449 126183 . + 0 ID=cds-EFD93751.1;Parent=gene-HMPREF0889_1105;Dbxref=NCBI_GP:EFD93751.1;Name=EFD93751.1;Note=identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011;gbkey=CDS;gene=rpsB;locus_tag=HMPREF0889_1105;product=ribosomal protein S2;protein_id=EFD93751.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 126268 126915 . + . ID=gene-HMPREF0889_1106;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HMPREF0889_1106 GCA_000177555.1|ADGP01000021.1 Genbank CDS 126268 126915 . + 0 ID=cds-EFD93752.1;Parent=gene-HMPREF0889_1106;Dbxref=NCBI_GP:EFD93752.1;Name=EFD93752.1;Note=identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116;gbkey=CDS;gene=tsf;locus_tag=HMPREF0889_1106;product=translation elongation factor Ts;protein_id=EFD93752.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 126994 127719 . + . ID=gene-HMPREF0889_1107;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1107 GCA_000177555.1|ADGP01000021.1 Genbank CDS 126994 127719 . + 0 ID=cds-EFD93753.1;Parent=gene-HMPREF0889_1107;Dbxref=NCBI_GP:EFD93753.1;Name=EFD93753.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075;gbkey=CDS;gene=pyrH;locus_tag=HMPREF0889_1107;product=UMP kinase;protein_id=EFD93753.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 127765 128325 . + . ID=gene-HMPREF0889_1108;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=HMPREF0889_1108 GCA_000177555.1|ADGP01000021.1 Genbank CDS 127765 128325 . + 0 ID=cds-EFD93754.1;Parent=gene-HMPREF0889_1108;Dbxref=NCBI_GP:EFD93754.1;Name=EFD93754.1;Note=identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496;gbkey=CDS;gene=frr;locus_tag=HMPREF0889_1108;product=ribosome recycling factor;protein_id=EFD93754.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 128325 128558 . + . ID=gene-HMPREF0889_1109;Name=HMPREF0889_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1109 GCA_000177555.1|ADGP01000021.1 Genbank CDS 128325 128558 . + 0 ID=cds-EFD93755.1;Parent=gene-HMPREF0889_1109;Dbxref=NCBI_GP:EFD93755.1;Name=EFD93755.1;gbkey=CDS;locus_tag=HMPREF0889_1109;product=hypothetical protein;protein_id=EFD93755.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 128563 129339 . + . ID=gene-HMPREF0889_1110;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1110 GCA_000177555.1|ADGP01000021.1 Genbank CDS 128563 129339 . + 0 ID=cds-EFD93756.1;Parent=gene-HMPREF0889_1110;Dbxref=NCBI_GP:EFD93756.1;Name=EFD93756.1;Note=identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;locus_tag=HMPREF0889_1110;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=EFD93756.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 129356 130186 . + . ID=gene-HMPREF0889_1111;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1111 GCA_000177555.1|ADGP01000021.1 Genbank CDS 129356 130186 . + 0 ID=cds-EFD93757.1;Parent=gene-HMPREF0889_1111;Dbxref=NCBI_GP:EFD93757.1;Name=EFD93757.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA;locus_tag=HMPREF0889_1111;product=phosphatidate cytidylyltransferase;protein_id=EFD93757.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 130199 131344 . + . ID=gene-HMPREF0889_1112;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=HMPREF0889_1112 GCA_000177555.1|ADGP01000021.1 Genbank CDS 130199 131344 . + 0 ID=cds-EFD93758.1;Parent=gene-HMPREF0889_1112;Dbxref=NCBI_GP:EFD93758.1;Name=EFD93758.1;Note=identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243;gbkey=CDS;gene=dxr;locus_tag=HMPREF0889_1112;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=EFD93758.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 131368 132408 . + . ID=gene-HMPREF0889_1113;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=HMPREF0889_1113 GCA_000177555.1|ADGP01000021.1 Genbank CDS 131368 132408 . + 0 ID=cds-EFD93759.1;Parent=gene-HMPREF0889_1113;Dbxref=NCBI_GP:EFD93759.1;Name=EFD93759.1;Note=identified by match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=rseP;locus_tag=HMPREF0889_1113;product=RIP metalloprotease RseP;protein_id=EFD93759.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 132422 133489 . + . ID=gene-HMPREF0889_1114;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1114 GCA_000177555.1|ADGP01000021.1 Genbank CDS 132422 133489 . + 0 ID=cds-EFD93760.1;Parent=gene-HMPREF0889_1114;Dbxref=NCBI_GP:EFD93760.1;Name=EFD93760.1;Note=identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612;gbkey=CDS;gene=ispG;locus_tag=HMPREF0889_1114;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=EFD93760.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 133621 136908 . + . ID=gene-HMPREF0889_1115;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=HMPREF0889_1115 GCA_000177555.1|ADGP01000021.1 Genbank CDS 133621 136908 . + 0 ID=cds-EFD93761.1;Parent=gene-HMPREF0889_1115;Dbxref=NCBI_GP:EFD93761.1;Name=EFD93761.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM TIGR00580;gbkey=CDS;gene=mfd;locus_tag=HMPREF0889_1115;product=transcription-repair coupling factor;protein_id=EFD93761.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 136901 138448 . + . ID=gene-HMPREF0889_1116;Name=HMPREF0889_1116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1116 GCA_000177555.1|ADGP01000021.1 Genbank CDS 136901 138448 . + 0 ID=cds-EFD93762.1;Parent=gene-HMPREF0889_1116;Dbxref=NCBI_GP:EFD93762.1;Name=EFD93762.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023;gbkey=CDS;locus_tag=HMPREF0889_1116;product=putative stage V sporulation protein B;protein_id=EFD93762.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 138464 139483 . + . ID=gene-HMPREF0889_1117;Name=HMPREF0889_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1117 GCA_000177555.1|ADGP01000021.1 Genbank CDS 138464 139483 . + 0 ID=cds-EFD93763.1;Parent=gene-HMPREF0889_1117;Dbxref=NCBI_GP:EFD93763.1;Name=EFD93763.1;Note=identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444;gbkey=CDS;locus_tag=HMPREF0889_1117;product=MazG family protein;protein_id=EFD93763.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 139537 139815 . + . ID=gene-HMPREF0889_1118;Name=HMPREF0889_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1118 GCA_000177555.1|ADGP01000021.1 Genbank CDS 139537 139815 . + 0 ID=cds-EFD93764.1;Parent=gene-HMPREF0889_1118;Dbxref=NCBI_GP:EFD93764.1;Name=EFD93764.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;locus_tag=HMPREF0889_1118;product=putative integration host factor%2C beta subunit;protein_id=EFD93764.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 139948 141102 . + . ID=gene-HMPREF0889_1119;Name=HMPREF0889_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1119 GCA_000177555.1|ADGP01000021.1 Genbank CDS 139948 141102 . + 0 ID=cds-EFD93765.1;Parent=gene-HMPREF0889_1119;Dbxref=NCBI_GP:EFD93765.1;Name=EFD93765.1;Note=identified by match to protein family HMM PF04101%3B match to protein family HMM PF06925;gbkey=CDS;locus_tag=HMPREF0889_1119;product=monogalactosyldiacylglycerol synthase%2C C-terminal domain protein;protein_id=EFD93765.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 141182 141961 . + . ID=gene-HMPREF0889_1120;Name=HMPREF0889_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1120 GCA_000177555.1|ADGP01000021.1 Genbank CDS 141182 141961 . + 0 ID=cds-EFD93766.1;Parent=gene-HMPREF0889_1120;Dbxref=NCBI_GP:EFD93766.1;Name=EFD93766.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;locus_tag=HMPREF0889_1120;product=hypothetical protein;protein_id=EFD93766.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 141973 142725 . + . ID=gene-HMPREF0889_1121;Name=HMPREF0889_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1121 GCA_000177555.1|ADGP01000021.1 Genbank CDS 141973 142725 . + 0 ID=cds-EFD93767.1;Parent=gene-HMPREF0889_1121;Dbxref=NCBI_GP:EFD93767.1;Name=EFD93767.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF0889_1121;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFD93767.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 142784 143749 . + . ID=gene-HMPREF0889_1122;Name=HMPREF0889_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1122 GCA_000177555.1|ADGP01000021.1 Genbank CDS 142784 143749 . + 0 ID=cds-EFD93768.1;Parent=gene-HMPREF0889_1122;Dbxref=NCBI_GP:EFD93768.1;Name=EFD93768.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1122;product=hypothetical protein;protein_id=EFD93768.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 143760 144122 . + . ID=gene-HMPREF0889_1123;Name=HMPREF0889_1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1123 GCA_000177555.1|ADGP01000021.1 Genbank CDS 143760 144122 . + 0 ID=cds-EFD93769.1;Parent=gene-HMPREF0889_1123;Dbxref=NCBI_GP:EFD93769.1;Name=EFD93769.1;Note=identified by match to protein family HMM PF06803;gbkey=CDS;locus_tag=HMPREF0889_1123;product=hypothetical protein;protein_id=EFD93769.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 144186 144575 . - . ID=gene-HMPREF0889_1124;Name=HMPREF0889_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1124 GCA_000177555.1|ADGP01000021.1 Genbank CDS 144186 144575 . - 0 ID=cds-EFD93770.1;Parent=gene-HMPREF0889_1124;Dbxref=NCBI_GP:EFD93770.1;Name=EFD93770.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;locus_tag=HMPREF0889_1124;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=EFD93770.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 144830 145627 . - . ID=gene-HMPREF0889_1125;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=HMPREF0889_1125 GCA_000177555.1|ADGP01000021.1 Genbank CDS 144830 145627 . - 0 ID=cds-EFD93771.1;Parent=gene-HMPREF0889_1125;Dbxref=NCBI_GP:EFD93771.1;Name=EFD93771.1;Note=identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544;gbkey=CDS;gene=lgt;locus_tag=HMPREF0889_1125;product=prolipoprotein diacylglyceryl transferase;protein_id=EFD93771.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 145949 148429 . + . ID=gene-HMPREF0889_1126;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1126 GCA_000177555.1|ADGP01000021.1 Genbank CDS 145949 148429 . + 0 ID=cds-EFD93772.1;Parent=gene-HMPREF0889_1126;Dbxref=NCBI_GP:EFD93772.1;Name=EFD93772.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396;gbkey=CDS;gene=leuS;locus_tag=HMPREF0889_1126;product=leucine--tRNA ligase;protein_id=EFD93772.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 148478 149092 . + . ID=gene-HMPREF0889_1127;Name=HMPREF0889_1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1127 GCA_000177555.1|ADGP01000021.1 Genbank CDS 148478 149092 . + 0 ID=cds-EFD93773.1;Parent=gene-HMPREF0889_1127;Dbxref=NCBI_GP:EFD93773.1;Name=EFD93773.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF0889_1127;product=hydrolase%2C NUDIX family;protein_id=EFD93773.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 149552 150691 . + . ID=gene-HMPREF0889_1128;Name=HMPREF0889_1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1128 GCA_000177555.1|ADGP01000021.1 Genbank CDS 149552 150691 . + 0 ID=cds-EFD93774.1;Parent=gene-HMPREF0889_1128;Dbxref=NCBI_GP:EFD93774.1;Name=EFD93774.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;locus_tag=HMPREF0889_1128;product=butyryl-CoA dehydrogenase;protein_id=EFD93774.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 150769 151575 . + . ID=gene-HMPREF0889_1129;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1129 GCA_000177555.1|ADGP01000021.1 Genbank CDS 150769 151575 . + 0 ID=cds-EFD93775.1;Parent=gene-HMPREF0889_1129;Dbxref=NCBI_GP:EFD93775.1;Name=EFD93775.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;gene=etfB;locus_tag=HMPREF0889_1129;product=electron transfer flavoprotein subunit beta;protein_id=EFD93775.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 151596 152612 . + . ID=gene-HMPREF0889_1130;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1130 GCA_000177555.1|ADGP01000021.1 Genbank CDS 151596 152612 . + 0 ID=cds-EFD93776.1;Parent=gene-HMPREF0889_1130;Dbxref=NCBI_GP:EFD93776.1;Name=EFD93776.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;locus_tag=HMPREF0889_1130;product=electron transfer flavoprotein subunit alpha;protein_id=EFD93776.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 152785 154296 . - . ID=gene-HMPREF0889_1131;Name=HMPREF0889_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1131 GCA_000177555.1|ADGP01000021.1 Genbank CDS 152785 154296 . - 0 ID=cds-EFD93777.1;Parent=gene-HMPREF0889_1131;Dbxref=NCBI_GP:EFD93777.1;Name=EFD93777.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF0889_1131;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFD93777.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 154525 156786 . + . ID=gene-HMPREF0889_1132;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1132 GCA_000177555.1|ADGP01000021.1 Genbank CDS 154525 156786 . + 0 ID=cds-EFD93778.1;Parent=gene-HMPREF0889_1132;Dbxref=NCBI_GP:EFD93778.1;Name=EFD93778.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051;gbkey=CDS;gene=topA;locus_tag=HMPREF0889_1132;product=DNA topoisomerase I;protein_id=EFD93778.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 156776 158089 . + . ID=gene-HMPREF0889_1133;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=HMPREF0889_1133 GCA_000177555.1|ADGP01000021.1 Genbank CDS 156776 158089 . + 0 ID=cds-EFD93779.1;Parent=gene-HMPREF0889_1133;Dbxref=NCBI_GP:EFD93779.1;Name=EFD93779.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137;gbkey=CDS;gene=trmFO;locus_tag=HMPREF0889_1133;product=tRNA:m(5)U-54 methyltransferase;protein_id=EFD93779.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 158090 158653 . + . ID=gene-HMPREF0889_1134;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=HMPREF0889_1134 GCA_000177555.1|ADGP01000021.1 Genbank CDS 158090 158653 . + 0 ID=cds-EFD93780.1;Parent=gene-HMPREF0889_1134;Dbxref=NCBI_GP:EFD93780.1;Name=EFD93780.1;Note=identified by match to protein family HMM PF00227%3B match to protein family HMM TIGR03692;gbkey=CDS;gene=hslV;locus_tag=HMPREF0889_1134;product=ATP-dependent protease HslVU%2C peptidase subunit;protein_id=EFD93780.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 158653 160026 . + . ID=gene-HMPREF0889_1135;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HMPREF0889_1135 GCA_000177555.1|ADGP01000021.1 Genbank CDS 158653 160026 . + 0 ID=cds-EFD93781.1;Parent=gene-HMPREF0889_1135;Dbxref=NCBI_GP:EFD93781.1;Name=EFD93781.1;Note=identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390;gbkey=CDS;gene=hslU;locus_tag=HMPREF0889_1135;product=ATP-dependent protease HslVU%2C ATPase subunit;protein_id=EFD93781.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 160036 161256 . + . ID=gene-HMPREF0889_1136;Name=HMPREF0889_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1136 GCA_000177555.1|ADGP01000021.1 Genbank CDS 160036 161256 . + 0 ID=cds-EFD93782.1;Parent=gene-HMPREF0889_1136;Dbxref=NCBI_GP:EFD93782.1;Name=EFD93782.1;gbkey=CDS;locus_tag=HMPREF0889_1136;product=hypothetical protein;protein_id=EFD93782.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 161380 162888 . + . ID=gene-HMPREF0889_1137;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1137 GCA_000177555.1|ADGP01000021.1 Genbank CDS 161380 162888 . + 0 ID=cds-EFD93783.1;Parent=gene-HMPREF0889_1137;Dbxref=NCBI_GP:EFD93783.1;Name=EFD93783.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;gene=thrC;locus_tag=HMPREF0889_1137;product=threonine synthase;protein_id=EFD93783.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 162872 163765 . + . ID=gene-HMPREF0889_1138;Name=HMPREF0889_1138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1138 GCA_000177555.1|ADGP01000021.1 Genbank CDS 162872 163765 . + 0 ID=cds-EFD93784.1;Parent=gene-HMPREF0889_1138;Dbxref=NCBI_GP:EFD93784.1;Name=EFD93784.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF0889_1138;product=putative membrane protein;protein_id=EFD93784.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 163773 164477 . + . ID=gene-HMPREF0889_1139;Name=HMPREF0889_1139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1139 GCA_000177555.1|ADGP01000021.1 Genbank CDS 163773 164477 . + 0 ID=cds-EFD93785.1;Parent=gene-HMPREF0889_1139;Dbxref=NCBI_GP:EFD93785.1;Name=EFD93785.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF0889_1139;product=SNARE-like domain protein;protein_id=EFD93785.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 164490 164939 . + . ID=gene-HMPREF0889_1140;Name=HMPREF0889_1140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1140 GCA_000177555.1|ADGP01000021.1 Genbank CDS 164490 164939 . + 0 ID=cds-EFD93786.1;Parent=gene-HMPREF0889_1140;Dbxref=NCBI_GP:EFD93786.1;Name=EFD93786.1;Note=identified by match to protein family HMM PF09719%3B match to protein family HMM TIGR01909;gbkey=CDS;locus_tag=HMPREF0889_1140;product=oxidoreductase;protein_id=EFD93786.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 164972 165670 . + . ID=gene-HMPREF0889_1141;Name=HMPREF0889_1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1141 GCA_000177555.1|ADGP01000021.1 Genbank CDS 164972 165670 . + 0 ID=cds-EFD93787.1;Parent=gene-HMPREF0889_1141;Dbxref=NCBI_GP:EFD93787.1;Name=EFD93787.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1141;product=hypothetical protein;protein_id=EFD93787.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 165744 166988 . - . ID=gene-HMPREF0889_1142;Name=HMPREF0889_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1142 GCA_000177555.1|ADGP01000021.1 Genbank CDS 165744 166988 . - 0 ID=cds-EFD93788.1;Parent=gene-HMPREF0889_1142;Dbxref=NCBI_GP:EFD93788.1;Name=EFD93788.1;Note=identified by match to protein family HMM PF02073;gbkey=CDS;locus_tag=HMPREF0889_1142;product=thermophilic metalloprotease (M29);protein_id=EFD93788.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 167011 168354 . - . ID=gene-HMPREF0889_1143;Name=HMPREF0889_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1143 GCA_000177555.1|ADGP01000021.1 Genbank CDS 167011 168354 . - 0 ID=cds-EFD93789.1;Parent=gene-HMPREF0889_1143;Dbxref=NCBI_GP:EFD93789.1;Name=EFD93789.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF0889_1143;product=putative multidrug efflux protein;protein_id=EFD93789.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 168425 168691 . - . ID=gene-HMPREF0889_1144;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HMPREF0889_1144 GCA_000177555.1|ADGP01000021.1 Genbank CDS 168425 168691 . - 0 ID=cds-EFD93790.1;Parent=gene-HMPREF0889_1144;Dbxref=NCBI_GP:EFD93790.1;Name=EFD93790.1;Note=identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029;gbkey=CDS;gene=rpsT;locus_tag=HMPREF0889_1144;product=ribosomal protein S20;protein_id=EFD93790.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 168793 169362 . - . ID=gene-HMPREF0889_1145;Name=HMPREF0889_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1145 GCA_000177555.1|ADGP01000021.1 Genbank CDS 168793 169362 . - 0 ID=cds-EFD93791.1;Parent=gene-HMPREF0889_1145;Dbxref=NCBI_GP:EFD93791.1;Name=EFD93791.1;Note=identified by match to protein family HMM PF02417;gbkey=CDS;locus_tag=HMPREF0889_1145;product=chromate transport protein;protein_id=EFD93791.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 169371 169931 . - . ID=gene-HMPREF0889_1146;Name=HMPREF0889_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1146 GCA_000177555.1|ADGP01000021.1 Genbank CDS 169371 169931 . - 0 ID=cds-EFD93792.1;Parent=gene-HMPREF0889_1146;Dbxref=NCBI_GP:EFD93792.1;Name=EFD93792.1;Note=identified by match to protein family HMM PF02417;gbkey=CDS;locus_tag=HMPREF0889_1146;product=chromate transport protein;protein_id=EFD93792.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 170074 170241 . + . ID=gene-HMPREF0889_1147;Name=HMPREF0889_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1147 GCA_000177555.1|ADGP01000021.1 Genbank CDS 170074 170241 . + 0 ID=cds-EFD93793.1;Parent=gene-HMPREF0889_1147;Dbxref=NCBI_GP:EFD93793.1;Name=EFD93793.1;gbkey=CDS;locus_tag=HMPREF0889_1147;product=hypothetical protein;protein_id=EFD93793.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 170452 171009 . + . ID=gene-HMPREF0889_1148;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF0889_1148 GCA_000177555.1|ADGP01000021.1 Genbank CDS 170452 171009 . + 0 ID=cds-EFD93794.1;Parent=gene-HMPREF0889_1148;Dbxref=NCBI_GP:EFD93794.1;Name=EFD93794.1;Note=identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=HMPREF0889_1148;product=shikimate kinase;protein_id=EFD93794.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 171006 171968 . + . ID=gene-HMPREF0889_1149;Name=HMPREF0889_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1149 GCA_000177555.1|ADGP01000021.1 Genbank CDS 171006 171968 . + 0 ID=cds-EFD93795.1;Parent=gene-HMPREF0889_1149;Dbxref=NCBI_GP:EFD93795.1;Name=EFD93795.1;Note=identified by match to protein family HMM PF00365;gbkey=CDS;locus_tag=HMPREF0889_1149;product=putative 6-phosphofructokinase;protein_id=EFD93795.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 172123 172791 . + . ID=gene-HMPREF0889_1150;Name=HMPREF0889_1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1150 GCA_000177555.1|ADGP01000021.1 Genbank CDS 172123 172791 . + 0 ID=cds-EFD93796.1;Parent=gene-HMPREF0889_1150;Dbxref=NCBI_GP:EFD93796.1;Name=EFD93796.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF0889_1150;product=ABC transporter%2C permease protein;protein_id=EFD93796.1;transl_table=11 GCA_000177555.1|ADGP01000021.1 Genbank gene 172778 173497 . + . ID=gene-HMPREF0889_1151;Name=HMPREF0889_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1151 GCA_000177555.1|ADGP01000021.1 Genbank CDS 172778 173497 . + 0 ID=cds-EFD93797.1;Parent=gene-HMPREF0889_1151;Dbxref=NCBI_GP:EFD93797.1;Name=EFD93797.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1151;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93797.1;transl_table=11 ##sequence-region ADGP01000020.1 1 210091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000020.1 Genbank region 1 210091 . + . ID=ADGP01000020.1:1..210091;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000020.1 Genbank gene 153 317 . + . ID=gene-HMPREF0889_0190;Name=HMPREF0889_0190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0190 GCA_000177555.1|ADGP01000020.1 Genbank CDS 153 317 . + 0 ID=cds-EFD93798.1;Parent=gene-HMPREF0889_0190;Dbxref=NCBI_GP:EFD93798.1;Name=EFD93798.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF0889_0190;product=hypothetical protein;protein_id=EFD93798.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 331 1185 . - . ID=gene-HMPREF0889_0191;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=HMPREF0889_0191 GCA_000177555.1|ADGP01000020.1 Genbank CDS 331 1185 . - 0 ID=cds-EFD93799.1;Parent=gene-HMPREF0889_0191;Dbxref=NCBI_GP:EFD93799.1;Name=EFD93799.1;Note=identified by match to protein family HMM PF09707%3B match to protein family HMM TIGR01873;gbkey=CDS;gene=cas2;locus_tag=HMPREF0889_0191;product=CRISPR-associated endoribonuclease Cas2;protein_id=EFD93799.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 1176 2126 . - . ID=gene-HMPREF0889_0192;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=HMPREF0889_0192 GCA_000177555.1|ADGP01000020.1 Genbank CDS 1176 2126 . - 0 ID=cds-EFD93800.1;Parent=gene-HMPREF0889_0192;Dbxref=NCBI_GP:EFD93800.1;Name=EFD93800.1;Note=identified by match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03638%3B CRISPR-associated endonuclease Cas1%2C ECOLI subtype;gbkey=CDS;gene=cas1;locus_tag=HMPREF0889_0192;product=CRISPR-associated endonuclease Cas1;protein_id=EFD93800.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 2123 2776 . - . ID=gene-HMPREF0889_0193;Name=casE;gbkey=Gene;gene=casE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0193 GCA_000177555.1|ADGP01000020.1 Genbank CDS 2123 2776 . - 0 ID=cds-EFD93801.1;Parent=gene-HMPREF0889_0193;Dbxref=NCBI_GP:EFD93801.1;Name=EFD93801.1;Note=identified by match to protein family HMM PF08798%3B match to protein family HMM TIGR01907;gbkey=CDS;gene=casE;locus_tag=HMPREF0889_0193;product=CRISPR system CASCADE complex protein CasE;protein_id=EFD93801.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 2757 3509 . - . ID=gene-HMPREF0889_0194;Name=casD;gbkey=Gene;gene=casD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0194 GCA_000177555.1|ADGP01000020.1 Genbank CDS 2757 3509 . - 0 ID=cds-EFD93802.1;Parent=gene-HMPREF0889_0194;Dbxref=NCBI_GP:EFD93802.1;Name=EFD93802.1;Note=identified by match to protein family HMM PF09708%3B match to protein family HMM TIGR01868%3B match to protein family HMM TIGR02593;gbkey=CDS;gene=casD;locus_tag=HMPREF0889_0194;product=CRISPR system CASCADE complex protein CasD;protein_id=EFD93802.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 3519 4604 . - . ID=gene-HMPREF0889_0195;Name=casC;gbkey=Gene;gene=casC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0195 GCA_000177555.1|ADGP01000020.1 Genbank CDS 3519 4604 . - 0 ID=cds-EFD93803.1;Parent=gene-HMPREF0889_0195;Dbxref=NCBI_GP:EFD93803.1;Name=EFD93803.1;Note=identified by match to protein family HMM PF09344%3B match to protein family HMM TIGR01869;gbkey=CDS;gene=casC;locus_tag=HMPREF0889_0195;product=CRISPR system CASCADE complex protein CasC;protein_id=EFD93803.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 4591 5178 . - . ID=gene-HMPREF0889_0196;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0196 GCA_000177555.1|ADGP01000020.1 Genbank CDS 4591 5178 . - 0 ID=cds-EFD93804.1;Parent=gene-HMPREF0889_0196;Dbxref=NCBI_GP:EFD93804.1;Name=EFD93804.1;Note=identified by match to protein family HMM PF09485%3B match to protein family HMM TIGR02548;gbkey=CDS;gene=casB;locus_tag=HMPREF0889_0196;product=CRISPR system CASCADE complex protein CasB;protein_id=EFD93804.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 5193 6932 . - . ID=gene-HMPREF0889_0197;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0197 GCA_000177555.1|ADGP01000020.1 Genbank CDS 5193 6932 . - 0 ID=cds-EFD93805.1;Parent=gene-HMPREF0889_0197;Dbxref=NCBI_GP:EFD93805.1;Name=EFD93805.1;Note=identified by match to protein family HMM PF09481%3B match to protein family HMM TIGR02547;gbkey=CDS;gene=casA;locus_tag=HMPREF0889_0197;product=CRISPR system CASCADE complex protein CasA;protein_id=EFD93805.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 6937 9711 . - . ID=gene-HMPREF0889_0198;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=HMPREF0889_0198 GCA_000177555.1|ADGP01000020.1 Genbank CDS 6937 9711 . - 0 ID=cds-EFD93806.1;Parent=gene-HMPREF0889_0198;Dbxref=NCBI_GP:EFD93806.1;Name=EFD93806.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM TIGR01587%3B match to protein family HMM TIGR01596;gbkey=CDS;gene=cas3;locus_tag=HMPREF0889_0198;product=CRISPR-associated helicase Cas3;protein_id=EFD93806.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 9963 10307 . - . ID=gene-HMPREF0889_0199;Name=HMPREF0889_0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0199 GCA_000177555.1|ADGP01000020.1 Genbank CDS 9963 10307 . - 0 ID=cds-EFD93807.1;Parent=gene-HMPREF0889_0199;Dbxref=NCBI_GP:EFD93807.1;Name=EFD93807.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=HMPREF0889_0199;product=histidine triad domain protein;protein_id=EFD93807.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 10304 11626 . - . ID=gene-HMPREF0889_0200;Name=yqeV;gbkey=Gene;gene=yqeV;gene_biotype=protein_coding;locus_tag=HMPREF0889_0200 GCA_000177555.1|ADGP01000020.1 Genbank CDS 10304 11626 . - 0 ID=cds-EFD93808.1;Parent=gene-HMPREF0889_0200;Dbxref=NCBI_GP:EFD93808.1;Name=EFD93808.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579;gbkey=CDS;gene=yqeV;locus_tag=HMPREF0889_0200;product=tRNA methylthiotransferase YqeV;protein_id=EFD93808.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 11630 12355 . - . ID=gene-HMPREF0889_0201;Name=HMPREF0889_0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0201 GCA_000177555.1|ADGP01000020.1 Genbank CDS 11630 12355 . - 0 ID=cds-EFD93809.1;Parent=gene-HMPREF0889_0201;Dbxref=NCBI_GP:EFD93809.1;Name=EFD93809.1;Note=identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;locus_tag=HMPREF0889_0201;product=RNA methyltransferase%2C RsmE family;protein_id=EFD93809.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 12356 13237 . - . ID=gene-HMPREF0889_0202;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0202 GCA_000177555.1|ADGP01000020.1 Genbank CDS 12356 13237 . - 0 ID=cds-EFD93810.1;Parent=gene-HMPREF0889_0202;Dbxref=NCBI_GP:EFD93810.1;Name=EFD93810.1;Note=identified by match to protein family HMM PF02475%3B match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR00406;gbkey=CDS;gene=prmA;locus_tag=HMPREF0889_0202;product=ribosomal protein L11 methyltransferase;protein_id=EFD93810.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 13269 14486 . - . ID=gene-HMPREF0889_0203;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0203 GCA_000177555.1|ADGP01000020.1 Genbank CDS 13269 14486 . - 0 ID=cds-EFD93811.1;Parent=gene-HMPREF0889_0203;Dbxref=NCBI_GP:EFD93811.1;Name=EFD93811.1;Note=identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349;gbkey=CDS;gene=dnaJ;locus_tag=HMPREF0889_0203;product=chaperone protein DnaJ;protein_id=EFD93811.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 14513 16366 . - . ID=gene-HMPREF0889_0204;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0204 GCA_000177555.1|ADGP01000020.1 Genbank CDS 14513 16366 . - 0 ID=cds-EFD93812.1;Parent=gene-HMPREF0889_0204;Dbxref=NCBI_GP:EFD93812.1;Name=EFD93812.1;Note=identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350;gbkey=CDS;gene=dnaK;locus_tag=HMPREF0889_0204;product=chaperone protein DnaK;protein_id=EFD93812.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 16397 16969 . - . ID=gene-HMPREF0889_0205;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0205 GCA_000177555.1|ADGP01000020.1 Genbank CDS 16397 16969 . - 0 ID=cds-EFD93813.1;Parent=gene-HMPREF0889_0205;Dbxref=NCBI_GP:EFD93813.1;Name=EFD93813.1;Note=identified by match to protein family HMM PF01025;gbkey=CDS;gene=grpE;locus_tag=HMPREF0889_0205;product=co-chaperone GrpE;protein_id=EFD93813.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 16984 18021 . - . ID=gene-HMPREF0889_0206;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0206 GCA_000177555.1|ADGP01000020.1 Genbank CDS 16984 18021 . - 0 ID=cds-EFD93814.1;Parent=gene-HMPREF0889_0206;Dbxref=NCBI_GP:EFD93814.1;Name=EFD93814.1;Note=identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331;gbkey=CDS;gene=hrcA;locus_tag=HMPREF0889_0206;product=heat-inducible transcription repressor HrcA;protein_id=EFD93814.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 18236 19519 . + . ID=gene-HMPREF0889_0207;Name=HMPREF0889_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0207 GCA_000177555.1|ADGP01000020.1 Genbank CDS 18236 19519 . + 0 ID=cds-EFD93815.1;Parent=gene-HMPREF0889_0207;Dbxref=NCBI_GP:EFD93815.1;Name=EFD93815.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;locus_tag=HMPREF0889_0207;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EFD93815.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 19714 20067 . + . ID=gene-HMPREF0889_0208;Name=HMPREF0889_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0208 GCA_000177555.1|ADGP01000020.1 Genbank CDS 19714 20067 . + 0 ID=cds-EFD93816.1;Parent=gene-HMPREF0889_0208;Dbxref=NCBI_GP:EFD93816.1;Name=EFD93816.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF0889_0208;product=DNA-binding helix-turn-helix protein;protein_id=EFD93816.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 20094 20762 . + . ID=gene-HMPREF0889_0209;Name=HMPREF0889_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0209 GCA_000177555.1|ADGP01000020.1 Genbank CDS 20094 20762 . + 0 ID=cds-EFD93817.1;Parent=gene-HMPREF0889_0209;Dbxref=NCBI_GP:EFD93817.1;Name=EFD93817.1;Note=identified by match to protein family HMM PF01205%3B match to protein family HMM PF09186%3B match to protein family HMM TIGR00257;gbkey=CDS;locus_tag=HMPREF0889_0209;product=YigZ family protein;protein_id=EFD93817.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 20803 22050 . + . ID=gene-HMPREF0889_0211;Name=HMPREF0889_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0211 GCA_000177555.1|ADGP01000020.1 Genbank CDS 20803 22050 . + 0 ID=cds-EFD93818.1;Parent=gene-HMPREF0889_0211;Dbxref=NCBI_GP:EFD93818.1;Name=EFD93818.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;locus_tag=HMPREF0889_0211;product=putative D-methionine ABC transporter%2C ATP-binding protein;protein_id=EFD93818.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank binding_site 20835 20932 . + . ID=id-HMPREF0889_0211;Note=SAM riboswitch (S box leader)%3B Rfam score 64.29;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162;locus_tag=HMPREF0889_0211 GCA_000177555.1|ADGP01000020.1 Genbank gene 22031 22684 . + . ID=gene-HMPREF0889_0212;Name=HMPREF0889_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0212 GCA_000177555.1|ADGP01000020.1 Genbank CDS 22031 22684 . + 0 ID=cds-EFD93819.1;Parent=gene-HMPREF0889_0212;Dbxref=NCBI_GP:EFD93819.1;Name=EFD93819.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF0889_0212;product=ABC transporter%2C permease protein;protein_id=EFD93819.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 22799 22887 . + . ID=gene-HMPREF0889_0213;Name=HMPREF0889_0213;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0213 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 22799 22887 . + . ID=rna-HMPREF0889_0213;Parent=gene-HMPREF0889_0213;gbkey=tRNA;locus_tag=HMPREF0889_0213;product=tRNA-Ser GCA_000177555.1|ADGP01000020.1 Genbank exon 22799 22887 . + . ID=exon-HMPREF0889_0213-1;Parent=rna-HMPREF0889_0213;gbkey=tRNA;locus_tag=HMPREF0889_0213;product=tRNA-Ser GCA_000177555.1|ADGP01000020.1 Genbank gene 23034 23657 . - . ID=gene-HMPREF0889_0214;Name=HMPREF0889_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0214 GCA_000177555.1|ADGP01000020.1 Genbank CDS 23034 23657 . - 0 ID=cds-EFD93820.1;Parent=gene-HMPREF0889_0214;Dbxref=NCBI_GP:EFD93820.1;Name=EFD93820.1;gbkey=CDS;locus_tag=HMPREF0889_0214;product=hypothetical protein;protein_id=EFD93820.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 23685 23852 . - . ID=gene-HMPREF0889_0215;Name=HMPREF0889_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0215 GCA_000177555.1|ADGP01000020.1 Genbank CDS 23685 23852 . - 0 ID=cds-EFD93821.1;Parent=gene-HMPREF0889_0215;Dbxref=NCBI_GP:EFD93821.1;Name=EFD93821.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0215;product=hypothetical protein;protein_id=EFD93821.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 23949 25400 . - . ID=gene-HMPREF0889_0216;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0216 GCA_000177555.1|ADGP01000020.1 Genbank CDS 23949 25400 . - 0 ID=cds-EFD93822.1;Parent=gene-HMPREF0889_0216;Dbxref=NCBI_GP:EFD93822.1;Name=EFD93822.1;Note=identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513;gbkey=CDS;gene=pncB;locus_tag=HMPREF0889_0216;product=nicotinate phosphoribosyltransferase;protein_id=EFD93822.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 25595 26476 . + . ID=gene-HMPREF0889_0217;Name=HMPREF0889_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0217 GCA_000177555.1|ADGP01000020.1 Genbank CDS 25595 26476 . + 0 ID=cds-EFD93823.1;Parent=gene-HMPREF0889_0217;Dbxref=NCBI_GP:EFD93823.1;Name=EFD93823.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF0889_0217;product=putative membrane protein;protein_id=EFD93823.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 26609 27859 . + . ID=gene-HMPREF0889_0218;Name=HMPREF0889_0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0218 GCA_000177555.1|ADGP01000020.1 Genbank CDS 26609 27859 . + 0 ID=cds-EFD93824.1;Parent=gene-HMPREF0889_0218;Dbxref=NCBI_GP:EFD93824.1;Name=EFD93824.1;Note=identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949;gbkey=CDS;locus_tag=HMPREF0889_0218;product=malic enzyme%2C NAD binding domain protein;protein_id=EFD93824.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 27951 28817 . - . ID=gene-HMPREF0889_0219;Name=HMPREF0889_0219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0219 GCA_000177555.1|ADGP01000020.1 Genbank CDS 27951 28817 . - 0 ID=cds-EFD93825.1;Parent=gene-HMPREF0889_0219;Dbxref=NCBI_GP:EFD93825.1;Name=EFD93825.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0219;product=hypothetical protein;protein_id=EFD93825.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 28975 29961 . - . ID=gene-HMPREF0889_0220;Name=HMPREF0889_0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0220 GCA_000177555.1|ADGP01000020.1 Genbank CDS 28975 29961 . - 0 ID=cds-EFD93826.1;Parent=gene-HMPREF0889_0220;Dbxref=NCBI_GP:EFD93826.1;Name=EFD93826.1;Note=identified by match to protein family HMM PF03601;gbkey=CDS;locus_tag=HMPREF0889_0220;product=hypothetical protein;protein_id=EFD93826.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 30131 31054 . + . ID=gene-HMPREF0889_0221;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0221 GCA_000177555.1|ADGP01000020.1 Genbank CDS 30131 31054 . + 0 ID=cds-EFD93827.1;Parent=gene-HMPREF0889_0221;Dbxref=NCBI_GP:EFD93827.1;Name=EFD93827.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;gene=lysR;locus_tag=HMPREF0889_0221;product=LysR substrate binding domain protein;protein_id=EFD93827.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 31112 32101 . + . ID=gene-HMPREF0889_0222;Name=HMPREF0889_0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0222 GCA_000177555.1|ADGP01000020.1 Genbank CDS 31112 32101 . + 0 ID=cds-EFD93828.1;Parent=gene-HMPREF0889_0222;Dbxref=NCBI_GP:EFD93828.1;Name=EFD93828.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF0889_0222;product=site-specific recombinase%2C phage integrase family;protein_id=EFD93828.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 32272 32826 . - . ID=gene-HMPREF0889_0223;Name=HMPREF0889_0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0223 GCA_000177555.1|ADGP01000020.1 Genbank CDS 32272 32826 . - 0 ID=cds-EFD93829.1;Parent=gene-HMPREF0889_0223;Dbxref=NCBI_GP:EFD93829.1;Name=EFD93829.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF0889_0223;product=hypothetical protein;protein_id=EFD93829.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 33046 33984 . - . ID=gene-HMPREF0889_0224;Name=HMPREF0889_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0224 GCA_000177555.1|ADGP01000020.1 Genbank CDS 33046 33984 . - 0 ID=cds-EFD93830.1;Parent=gene-HMPREF0889_0224;Dbxref=NCBI_GP:EFD93830.1;Name=EFD93830.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF0889_0224;product=Transketolase%2C pyridine binding domain protein;protein_id=EFD93830.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 33984 34805 . - . ID=gene-HMPREF0889_0225;Name=HMPREF0889_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0225 GCA_000177555.1|ADGP01000020.1 Genbank CDS 33984 34805 . - 0 ID=cds-EFD93831.1;Parent=gene-HMPREF0889_0225;Dbxref=NCBI_GP:EFD93831.1;Name=EFD93831.1;Note=identified by match to protein family HMM PF00456;gbkey=CDS;locus_tag=HMPREF0889_0225;product=Transketolase%2C thiamine diphosphate binding domain protein;protein_id=EFD93831.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 35040 35924 . - . ID=gene-HMPREF0889_0226;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0226 GCA_000177555.1|ADGP01000020.1 Genbank CDS 35040 35924 . - 0 ID=cds-EFD93832.1;Parent=gene-HMPREF0889_0226;Dbxref=NCBI_GP:EFD93832.1;Name=EFD93832.1;Note=identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755;gbkey=CDS;gene=ksgA;locus_tag=HMPREF0889_0226;product=dimethyladenosine transferase;protein_id=EFD93832.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 35921 36469 . - . ID=gene-HMPREF0889_0227;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=HMPREF0889_0227 GCA_000177555.1|ADGP01000020.1 Genbank CDS 35921 36469 . - 0 ID=cds-EFD93833.1;Parent=gene-HMPREF0889_0227;Dbxref=NCBI_GP:EFD93833.1;Name=EFD93833.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334;gbkey=CDS;gene=rnmV;locus_tag=HMPREF0889_0227;product=ribonuclease M5;protein_id=EFD93833.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 36462 37718 . - . ID=gene-HMPREF0889_0228;Name=HMPREF0889_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0228 GCA_000177555.1|ADGP01000020.1 Genbank CDS 36462 37718 . - 0 ID=cds-EFD93834.1;Parent=gene-HMPREF0889_0228;Dbxref=NCBI_GP:EFD93834.1;Name=EFD93834.1;Note=identified by match to protein family HMM PF06838;gbkey=CDS;locus_tag=HMPREF0889_0228;product=aluminum resistance protein;protein_id=EFD93834.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 37723 38667 . - . ID=gene-HMPREF0889_0229;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0229 GCA_000177555.1|ADGP01000020.1 Genbank CDS 37723 38667 . - 0 ID=cds-EFD93835.1;Parent=gene-HMPREF0889_0229;Dbxref=NCBI_GP:EFD93835.1;Name=EFD93835.1;Note=identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;locus_tag=HMPREF0889_0229;product=tRNA dimethylallyltransferase;protein_id=EFD93835.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 38660 39445 . - . ID=gene-HMPREF0889_0230;Name=HMPREF0889_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0230 GCA_000177555.1|ADGP01000020.1 Genbank CDS 38660 39445 . - 0 ID=cds-EFD93836.1;Parent=gene-HMPREF0889_0230;Dbxref=NCBI_GP:EFD93836.1;Name=EFD93836.1;Note=identified by match to protein family HMM PF04445;gbkey=CDS;locus_tag=HMPREF0889_0230;product=hypothetical protein;protein_id=EFD93836.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 39442 41340 . - . ID=gene-HMPREF0889_0231;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF0889_0231 GCA_000177555.1|ADGP01000020.1 Genbank CDS 39442 41340 . - 0 ID=cds-EFD93837.1;Parent=gene-HMPREF0889_0231;Dbxref=NCBI_GP:EFD93837.1;Name=EFD93837.1;Note=identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585;gbkey=CDS;gene=mutL;locus_tag=HMPREF0889_0231;product=DNA mismatch repair domain protein;protein_id=EFD93837.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 41337 43937 . - . ID=gene-HMPREF0889_0232;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0232 GCA_000177555.1|ADGP01000020.1 Genbank CDS 41337 43937 . - 0 ID=cds-EFD93838.1;Parent=gene-HMPREF0889_0232;Dbxref=NCBI_GP:EFD93838.1;Name=EFD93838.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070;gbkey=CDS;gene=mutS;locus_tag=HMPREF0889_0232;product=DNA mismatch repair protein MutS;protein_id=EFD93838.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 43948 45276 . - . ID=gene-HMPREF0889_0233;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0233 GCA_000177555.1|ADGP01000020.1 Genbank CDS 43948 45276 . - 0 ID=cds-EFD93839.1;Parent=gene-HMPREF0889_0233;Dbxref=NCBI_GP:EFD93839.1;Name=EFD93839.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574;gbkey=CDS;gene=miaB;locus_tag=HMPREF0889_0233;product=tRNA-i(6)A37 thiotransferase enzyme MiaB;protein_id=EFD93839.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 45375 45926 . - . ID=gene-HMPREF0889_0234;Name=HMPREF0889_0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0234 GCA_000177555.1|ADGP01000020.1 Genbank CDS 45375 45926 . - 0 ID=cds-EFD93840.1;Parent=gene-HMPREF0889_0234;Dbxref=NCBI_GP:EFD93840.1;Name=EFD93840.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;locus_tag=HMPREF0889_0234;product=phosphoribosyl transferase domain protein;protein_id=EFD93840.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 45979 46662 . - . ID=gene-HMPREF0889_0235;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0235 GCA_000177555.1|ADGP01000020.1 Genbank CDS 45979 46662 . - 0 ID=cds-EFD93841.1;Parent=gene-HMPREF0889_0235;Dbxref=NCBI_GP:EFD93841.1;Name=EFD93841.1;Note=identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945;gbkey=CDS;gene=tatC;locus_tag=HMPREF0889_0235;product=twin arginine-targeting protein translocase TatC;protein_id=EFD93841.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 46673 46900 . - . ID=gene-HMPREF0889_0236;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0236 GCA_000177555.1|ADGP01000020.1 Genbank CDS 46673 46900 . - 0 ID=cds-EFD93842.1;Parent=gene-HMPREF0889_0236;Dbxref=NCBI_GP:EFD93842.1;Name=EFD93842.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;gene=tatA;locus_tag=HMPREF0889_0236;product=twin arginine-targeting protein translocase%2C TatA/E family;protein_id=EFD93842.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 46965 47049 . - . ID=gene-HMPREF0889_0237;Name=HMPREF0889_0237;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0237 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 46965 47049 . - . ID=rna-HMPREF0889_0237;Parent=gene-HMPREF0889_0237;gbkey=tRNA;locus_tag=HMPREF0889_0237;product=tRNA-Leu GCA_000177555.1|ADGP01000020.1 Genbank exon 46965 47049 . - . ID=exon-HMPREF0889_0237-1;Parent=rna-HMPREF0889_0237;gbkey=tRNA;locus_tag=HMPREF0889_0237;product=tRNA-Leu GCA_000177555.1|ADGP01000020.1 Genbank gene 47302 48012 . - . ID=gene-HMPREF0889_0238;Name=HMPREF0889_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0238 GCA_000177555.1|ADGP01000020.1 Genbank CDS 47302 48012 . - 0 ID=cds-EFD93843.1;Parent=gene-HMPREF0889_0238;Dbxref=NCBI_GP:EFD93843.1;Name=EFD93843.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF0889_0238;product=SNARE-like domain protein;protein_id=EFD93843.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 48113 49120 . - . ID=gene-HMPREF0889_0239;Name=HMPREF0889_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0239 GCA_000177555.1|ADGP01000020.1 Genbank CDS 48113 49120 . - 0 ID=cds-EFD93844.1;Parent=gene-HMPREF0889_0239;Dbxref=NCBI_GP:EFD93844.1;Name=EFD93844.1;Note=identified by match to protein family HMM PF03595;gbkey=CDS;locus_tag=HMPREF0889_0239;product=C4-dicarboxylate transporter/malic acid transport protein;protein_id=EFD93844.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 49187 49981 . - . ID=gene-HMPREF0889_0240;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0240 GCA_000177555.1|ADGP01000020.1 Genbank CDS 49187 49981 . - 0 ID=cds-EFD93845.1;Parent=gene-HMPREF0889_0240;Dbxref=NCBI_GP:EFD93845.1;Name=EFD93845.1;Note=identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071;gbkey=CDS;gene=truA;locus_tag=HMPREF0889_0240;product=tRNA pseudouridine synthase A;protein_id=EFD93845.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 49972 50772 . - . ID=gene-HMPREF0889_0241;Name=HMPREF0889_0241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0241 GCA_000177555.1|ADGP01000020.1 Genbank CDS 49972 50772 . - 0 ID=cds-EFD93846.1;Parent=gene-HMPREF0889_0241;Dbxref=NCBI_GP:EFD93846.1;Name=EFD93846.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF0889_0241;product=cobalt transport protein;protein_id=EFD93846.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 50762 51631 . - . ID=gene-HMPREF0889_0242;Name=HMPREF0889_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0242 GCA_000177555.1|ADGP01000020.1 Genbank CDS 50762 51631 . - 0 ID=cds-EFD93847.1;Parent=gene-HMPREF0889_0242;Dbxref=NCBI_GP:EFD93847.1;Name=EFD93847.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0242;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93847.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 51622 52455 . - . ID=gene-HMPREF0889_0243;Name=HMPREF0889_0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0243 GCA_000177555.1|ADGP01000020.1 Genbank CDS 51622 52455 . - 0 ID=cds-EFD93848.1;Parent=gene-HMPREF0889_0243;Dbxref=NCBI_GP:EFD93848.1;Name=EFD93848.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0243;product=cobalt ABC transporter%2C ATP-binding protein;protein_id=EFD93848.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 52549 53097 . - . ID=gene-HMPREF0889_0244;Name=HMPREF0889_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0244 GCA_000177555.1|ADGP01000020.1 Genbank CDS 52549 53097 . - 0 ID=cds-EFD93849.1;Parent=gene-HMPREF0889_0244;Dbxref=NCBI_GP:EFD93849.1;Name=EFD93849.1;gbkey=CDS;locus_tag=HMPREF0889_0244;product=hypothetical protein;protein_id=EFD93849.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 53284 53790 . - . ID=gene-HMPREF0889_0245;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0245 GCA_000177555.1|ADGP01000020.1 Genbank CDS 53284 53790 . - 0 ID=cds-EFD93850.1;Parent=gene-HMPREF0889_0245;Dbxref=NCBI_GP:EFD93850.1;Name=EFD93850.1;Note=identified by match to protein family HMM TIGR02491;gbkey=CDS;gene=nrdG;locus_tag=HMPREF0889_0245;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=EFD93850.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 53802 55952 . - . ID=gene-HMPREF0889_0246;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0246 GCA_000177555.1|ADGP01000020.1 Genbank CDS 53802 55952 . - 0 ID=cds-EFD93851.1;Parent=gene-HMPREF0889_0246;Dbxref=NCBI_GP:EFD93851.1;Name=EFD93851.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF03477%3B match to protein family HMM TIGR02487;gbkey=CDS;gene=nrdD;locus_tag=HMPREF0889_0246;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=EFD93851.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 56188 56898 . - . ID=gene-HMPREF0889_0247;Name=HMPREF0889_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0247 GCA_000177555.1|ADGP01000020.1 Genbank CDS 56188 56898 . - 0 ID=cds-EFD93852.1;Parent=gene-HMPREF0889_0247;Dbxref=NCBI_GP:EFD93852.1;Name=EFD93852.1;Note=identified by match to protein family HMM PF00899;gbkey=CDS;locus_tag=HMPREF0889_0247;product=ThiF family protein;protein_id=EFD93852.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 56895 57263 . - . ID=gene-HMPREF0889_0248;Name=HMPREF0889_0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0248 GCA_000177555.1|ADGP01000020.1 Genbank CDS 56895 57263 . - 0 ID=cds-EFD93853.1;Parent=gene-HMPREF0889_0248;Dbxref=NCBI_GP:EFD93853.1;Name=EFD93853.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=HMPREF0889_0248;product=glyoxalase family protein;protein_id=EFD93853.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 57298 60342 . - . ID=gene-HMPREF0889_0249;Name=HMPREF0889_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0249 GCA_000177555.1|ADGP01000020.1 Genbank CDS 57298 60342 . - 0 ID=cds-EFD93854.1;Parent=gene-HMPREF0889_0249;Dbxref=NCBI_GP:EFD93854.1;Name=EFD93854.1;Note=identified by match to protein family HMM PF02463;gbkey=CDS;locus_tag=HMPREF0889_0249;product=exonuclease SbcCD%2C C subunit;protein_id=EFD93854.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 60339 61487 . - . ID=gene-HMPREF0889_0250;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0250 GCA_000177555.1|ADGP01000020.1 Genbank CDS 60339 61487 . - 0 ID=cds-EFD93855.1;Parent=gene-HMPREF0889_0250;Dbxref=NCBI_GP:EFD93855.1;Name=EFD93855.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619;gbkey=CDS;gene=sbcD;locus_tag=HMPREF0889_0250;product=exonuclease SbcCD%2C D subunit;protein_id=EFD93855.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 61552 61962 . - . ID=gene-HMPREF0889_0251;Name=HMPREF0889_0251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0251 GCA_000177555.1|ADGP01000020.1 Genbank CDS 61552 61962 . - 0 ID=cds-EFD93856.1;Parent=gene-HMPREF0889_0251;Dbxref=NCBI_GP:EFD93856.1;Name=EFD93856.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF0889_0251;product=transcriptional regulator%2C Fur family;protein_id=EFD93856.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 62017 62148 . - . ID=gene-HMPREF0889_0252;Name=HMPREF0889_0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0252 GCA_000177555.1|ADGP01000020.1 Genbank CDS 62017 62148 . - 0 ID=cds-EFD93857.1;Parent=gene-HMPREF0889_0252;Dbxref=NCBI_GP:EFD93857.1;Name=EFD93857.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0252;product=hypothetical protein;protein_id=EFD93857.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 62227 62318 . - . ID=gene-HMPREF0889_0253;Name=HMPREF0889_0253;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0253 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 62227 62318 . - . ID=rna-HMPREF0889_0253;Parent=gene-HMPREF0889_0253;gbkey=tRNA;locus_tag=HMPREF0889_0253;product=tRNA-Ser GCA_000177555.1|ADGP01000020.1 Genbank exon 62227 62318 . - . ID=exon-HMPREF0889_0253-1;Parent=rna-HMPREF0889_0253;gbkey=tRNA;locus_tag=HMPREF0889_0253;product=tRNA-Ser GCA_000177555.1|ADGP01000020.1 Genbank gene 62359 62435 . - . ID=gene-HMPREF0889_0254;Name=HMPREF0889_0254;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0254 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 62359 62435 . - . ID=rna-HMPREF0889_0254;Parent=gene-HMPREF0889_0254;gbkey=tRNA;locus_tag=HMPREF0889_0254;product=tRNA-Pro GCA_000177555.1|ADGP01000020.1 Genbank exon 62359 62435 . - . ID=exon-HMPREF0889_0254-1;Parent=rna-HMPREF0889_0254;gbkey=tRNA;locus_tag=HMPREF0889_0254;product=tRNA-Pro GCA_000177555.1|ADGP01000020.1 Genbank gene 62480 63193 . - . ID=gene-HMPREF0889_0255;Name=HMPREF0889_0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0255 GCA_000177555.1|ADGP01000020.1 Genbank CDS 62480 63193 . - 0 ID=cds-EFD93858.1;Parent=gene-HMPREF0889_0255;Dbxref=NCBI_GP:EFD93858.1;Name=EFD93858.1;Note=identified by match to protein family HMM PF03741%3B match to protein family HMM TIGR03717;gbkey=CDS;locus_tag=HMPREF0889_0255;product=integral membrane protein%2C YjbE family;protein_id=EFD93858.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 63361 64779 . - . ID=gene-HMPREF0889_0256;Name=HMPREF0889_0256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0256 GCA_000177555.1|ADGP01000020.1 Genbank CDS 63361 64779 . - 0 ID=cds-EFD93859.1;Parent=gene-HMPREF0889_0256;Dbxref=NCBI_GP:EFD93859.1;Name=EFD93859.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF0889_0256;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EFD93859.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 65207 66007 . - . ID=gene-HMPREF0889_0257;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0257 GCA_000177555.1|ADGP01000020.1 Genbank CDS 65207 66007 . - 0 ID=cds-EFD93860.1;Parent=gene-HMPREF0889_0257;Dbxref=NCBI_GP:EFD93860.1;Name=EFD93860.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;locus_tag=HMPREF0889_0257;product=pyrroline-5-carboxylate reductase;protein_id=EFD93860.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 66078 67334 . - . ID=gene-HMPREF0889_0258;Name=HMPREF0889_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0258 GCA_000177555.1|ADGP01000020.1 Genbank CDS 66078 67334 . - 0 ID=cds-EFD93861.1;Parent=gene-HMPREF0889_0258;Dbxref=NCBI_GP:EFD93861.1;Name=EFD93861.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_0258;product=aminotransferase%2C class I/II;protein_id=EFD93861.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 67702 68661 . + . ID=gene-HMPREF0889_0259;Name=HMPREF0889_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0259 GCA_000177555.1|ADGP01000020.1 Genbank CDS 67702 68661 . + 0 ID=cds-EFD93862.1;Parent=gene-HMPREF0889_0259;Dbxref=NCBI_GP:EFD93862.1;Name=EFD93862.1;gbkey=CDS;locus_tag=HMPREF0889_0259;product=NLPA lipoprotein;protein_id=EFD93862.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 68636 69352 . + . ID=gene-HMPREF0889_0260;Name=HMPREF0889_0260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0260 GCA_000177555.1|ADGP01000020.1 Genbank CDS 68636 69352 . + 0 ID=cds-EFD93863.1;Parent=gene-HMPREF0889_0260;Dbxref=NCBI_GP:EFD93863.1;Name=EFD93863.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0260;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93863.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 69468 70094 . + . ID=gene-HMPREF0889_0261;Name=HMPREF0889_0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0261 GCA_000177555.1|ADGP01000020.1 Genbank CDS 69468 70094 . + 0 ID=cds-EFD93864.1;Parent=gene-HMPREF0889_0261;Dbxref=NCBI_GP:EFD93864.1;Name=EFD93864.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF0889_0261;product=ABC transporter%2C permease protein;protein_id=EFD93864.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 70250 70405 . - . ID=gene-HMPREF0889_0262;Name=HMPREF0889_0262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0262 GCA_000177555.1|ADGP01000020.1 Genbank CDS 70250 70405 . - 0 ID=cds-EFD93865.1;Parent=gene-HMPREF0889_0262;Dbxref=NCBI_GP:EFD93865.1;Name=EFD93865.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0262;product=hypothetical protein;protein_id=EFD93865.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 70559 71722 . + . ID=gene-HMPREF0889_0263;Name=HMPREF0889_0263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0263 GCA_000177555.1|ADGP01000020.1 Genbank CDS 70559 71722 . + 0 ID=cds-EFD93866.1;Parent=gene-HMPREF0889_0263;Dbxref=NCBI_GP:EFD93866.1;Name=EFD93866.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF0889_0263;product=transporter%2C major facilitator family protein;protein_id=EFD93866.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 71908 73098 . - . ID=gene-HMPREF0889_0264;Name=HMPREF0889_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0264 GCA_000177555.1|ADGP01000020.1 Genbank CDS 71908 73098 . - 0 ID=cds-EFD93867.1;Parent=gene-HMPREF0889_0264;Dbxref=NCBI_GP:EFD93867.1;Name=EFD93867.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_0264;product=aminotransferase%2C class I/II;protein_id=EFD93867.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 73154 73570 . - . ID=gene-HMPREF0889_0265;Name=HMPREF0889_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0265 GCA_000177555.1|ADGP01000020.1 Genbank CDS 73154 73570 . - 0 ID=cds-EFD93868.1;Parent=gene-HMPREF0889_0265;Dbxref=NCBI_GP:EFD93868.1;Name=EFD93868.1;Note=identified by match to protein family HMM PF04246;gbkey=CDS;locus_tag=HMPREF0889_0265;product=positive regulator of sigma(E)%2C RseC/MucC;protein_id=EFD93868.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 73786 75816 . - . ID=gene-HMPREF0889_0266;Name=HMPREF0889_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0266 GCA_000177555.1|ADGP01000020.1 Genbank CDS 73786 75816 . - 0 ID=cds-EFD93869.1;Parent=gene-HMPREF0889_0266;Dbxref=NCBI_GP:EFD93869.1;Name=EFD93869.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF0889_0266;product=heavy metal translocating P-type ATPase;protein_id=EFD93869.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 75876 76529 . - . ID=gene-HMPREF0889_0267;Name=HMPREF0889_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0267 GCA_000177555.1|ADGP01000020.1 Genbank CDS 75876 76529 . - 0 ID=cds-EFD93870.1;Parent=gene-HMPREF0889_0267;Dbxref=NCBI_GP:EFD93870.1;Name=EFD93870.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0267;product=hypothetical protein;protein_id=EFD93870.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 76532 76834 . - . ID=gene-HMPREF0889_0268;Name=HMPREF0889_0268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0268 GCA_000177555.1|ADGP01000020.1 Genbank CDS 76532 76834 . - 0 ID=cds-EFD93871.1;Parent=gene-HMPREF0889_0268;Dbxref=NCBI_GP:EFD93871.1;Name=EFD93871.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0268;product=hypothetical protein;protein_id=EFD93871.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 76915 77133 . - . ID=gene-HMPREF0889_0269;Name=HMPREF0889_0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0269 GCA_000177555.1|ADGP01000020.1 Genbank CDS 76915 77133 . - 0 ID=cds-EFD93872.1;Parent=gene-HMPREF0889_0269;Dbxref=NCBI_GP:EFD93872.1;Name=EFD93872.1;gbkey=CDS;locus_tag=HMPREF0889_0269;product=hypothetical protein;protein_id=EFD93872.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 77795 78268 . - . ID=gene-HMPREF0889_0270;Name=HMPREF0889_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0270 GCA_000177555.1|ADGP01000020.1 Genbank CDS 77795 78268 . - 0 ID=cds-EFD93873.1;Parent=gene-HMPREF0889_0270;Dbxref=NCBI_GP:EFD93873.1;Name=EFD93873.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0270;product=hypothetical protein;protein_id=EFD93873.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 78272 78892 . - . ID=gene-HMPREF0889_0271;Name=HMPREF0889_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0271 GCA_000177555.1|ADGP01000020.1 Genbank CDS 78272 78892 . - 0 ID=cds-EFD93874.1;Parent=gene-HMPREF0889_0271;Dbxref=NCBI_GP:EFD93874.1;Name=EFD93874.1;gbkey=CDS;locus_tag=HMPREF0889_0271;product=hypothetical protein;protein_id=EFD93874.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 78964 79689 . - . ID=gene-HMPREF0889_0272;Name=HMPREF0889_0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0272 GCA_000177555.1|ADGP01000020.1 Genbank CDS 78964 79689 . - 0 ID=cds-EFD93875.1;Parent=gene-HMPREF0889_0272;Dbxref=NCBI_GP:EFD93875.1;Name=EFD93875.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0272;product=hypothetical protein;protein_id=EFD93875.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 79701 79997 . - . ID=gene-HMPREF0889_0273;Name=HMPREF0889_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0273 GCA_000177555.1|ADGP01000020.1 Genbank CDS 79701 79997 . - 0 ID=cds-EFD93876.1;Parent=gene-HMPREF0889_0273;Dbxref=NCBI_GP:EFD93876.1;Name=EFD93876.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0273;product=hypothetical protein;protein_id=EFD93876.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 79987 80157 . - . ID=gene-HMPREF0889_0274;Name=HMPREF0889_0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0274 GCA_000177555.1|ADGP01000020.1 Genbank CDS 79987 80157 . - 0 ID=cds-EFD93877.1;Parent=gene-HMPREF0889_0274;Dbxref=NCBI_GP:EFD93877.1;Name=EFD93877.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0274;product=hypothetical protein;protein_id=EFD93877.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 80244 82097 . - . ID=gene-HMPREF0889_0275;Name=HMPREF0889_0275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0275 GCA_000177555.1|ADGP01000020.1 Genbank CDS 80244 82097 . - 0 ID=cds-EFD93878.1;Parent=gene-HMPREF0889_0275;Dbxref=NCBI_GP:EFD93878.1;Name=EFD93878.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0275;product=hypothetical protein;protein_id=EFD93878.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 82139 83113 . - . ID=gene-HMPREF0889_0276;Name=HMPREF0889_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0276 GCA_000177555.1|ADGP01000020.1 Genbank CDS 82139 83113 . - 0 ID=cds-EFD93879.1;Parent=gene-HMPREF0889_0276;Dbxref=NCBI_GP:EFD93879.1;Name=EFD93879.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0276;product=hypothetical protein;protein_id=EFD93879.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 83110 89556 . - . ID=gene-HMPREF0889_0277;Name=HMPREF0889_0277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0277 GCA_000177555.1|ADGP01000020.1 Genbank CDS 83110 89556 . - 0 ID=cds-EFD93880.1;Parent=gene-HMPREF0889_0277;Dbxref=NCBI_GP:EFD93880.1;Name=EFD93880.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0277;product=hypothetical protein;protein_id=EFD93880.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 89568 92243 . - . ID=gene-HMPREF0889_0278;Name=HMPREF0889_0278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0278 GCA_000177555.1|ADGP01000020.1 Genbank CDS 89568 92243 . - 0 ID=cds-EFD93881.1;Parent=gene-HMPREF0889_0278;Dbxref=NCBI_GP:EFD93881.1;Name=EFD93881.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;locus_tag=HMPREF0889_0278;product=transglycosylase SLT domain protein;protein_id=EFD93881.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 92256 92909 . - . ID=gene-HMPREF0889_0279;Name=HMPREF0889_0279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0279 GCA_000177555.1|ADGP01000020.1 Genbank CDS 92256 92909 . - 0 ID=cds-EFD93882.1;Parent=gene-HMPREF0889_0279;Dbxref=NCBI_GP:EFD93882.1;Name=EFD93882.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0279;product=hypothetical protein;protein_id=EFD93882.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 92911 93363 . - . ID=gene-HMPREF0889_0280;Name=HMPREF0889_0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0280 GCA_000177555.1|ADGP01000020.1 Genbank CDS 92911 93363 . - 0 ID=cds-EFD93883.1;Parent=gene-HMPREF0889_0280;Dbxref=NCBI_GP:EFD93883.1;Name=EFD93883.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0280;product=hypothetical protein;protein_id=EFD93883.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 93363 96482 . - . ID=gene-HMPREF0889_0281;Name=HMPREF0889_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0281 GCA_000177555.1|ADGP01000020.1 Genbank CDS 93363 96482 . - 0 ID=cds-EFD93884.1;Parent=gene-HMPREF0889_0281;Dbxref=NCBI_GP:EFD93884.1;Name=EFD93884.1;gbkey=CDS;locus_tag=HMPREF0889_0281;product=hypothetical protein;protein_id=EFD93884.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 96485 97183 . - . ID=gene-HMPREF0889_0282;Name=HMPREF0889_0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0282 GCA_000177555.1|ADGP01000020.1 Genbank CDS 96485 97183 . - 0 ID=cds-EFD93885.1;Parent=gene-HMPREF0889_0282;Dbxref=NCBI_GP:EFD93885.1;Name=EFD93885.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0282;product=hypothetical protein;protein_id=EFD93885.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 97402 97746 . - . ID=gene-HMPREF0889_0283;Name=HMPREF0889_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0283 GCA_000177555.1|ADGP01000020.1 Genbank CDS 97402 97746 . - 0 ID=cds-EFD93886.1;Parent=gene-HMPREF0889_0283;Dbxref=NCBI_GP:EFD93886.1;Name=EFD93886.1;gbkey=CDS;locus_tag=HMPREF0889_0283;product=hypothetical protein;protein_id=EFD93886.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 97763 98752 . - . ID=gene-HMPREF0889_0284;Name=HMPREF0889_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0284 GCA_000177555.1|ADGP01000020.1 Genbank CDS 97763 98752 . - 0 ID=cds-EFD93887.1;Parent=gene-HMPREF0889_0284;Dbxref=NCBI_GP:EFD93887.1;Name=EFD93887.1;gbkey=CDS;locus_tag=HMPREF0889_0284;product=hypothetical protein;protein_id=EFD93887.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 98766 99470 . - . ID=gene-HMPREF0889_0285;Name=HMPREF0889_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0285 GCA_000177555.1|ADGP01000020.1 Genbank CDS 98766 99470 . - 0 ID=cds-EFD93888.1;Parent=gene-HMPREF0889_0285;Dbxref=NCBI_GP:EFD93888.1;Name=EFD93888.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0285;product=hypothetical protein;protein_id=EFD93888.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 99474 99770 . - . ID=gene-HMPREF0889_0286;Name=HMPREF0889_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0286 GCA_000177555.1|ADGP01000020.1 Genbank CDS 99474 99770 . - 0 ID=cds-EFD93889.1;Parent=gene-HMPREF0889_0286;Dbxref=NCBI_GP:EFD93889.1;Name=EFD93889.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0286;product=hypothetical protein;protein_id=EFD93889.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 99767 101500 . - . ID=gene-HMPREF0889_0287;Name=HMPREF0889_0287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0287 GCA_000177555.1|ADGP01000020.1 Genbank CDS 99767 101500 . - 0 ID=cds-EFD93890.1;Parent=gene-HMPREF0889_0287;Dbxref=NCBI_GP:EFD93890.1;Name=EFD93890.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0287;product=hypothetical protein;protein_id=EFD93890.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 101504 101740 . - . ID=gene-HMPREF0889_0288;Name=HMPREF0889_0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0288 GCA_000177555.1|ADGP01000020.1 Genbank CDS 101504 101740 . - 0 ID=cds-EFD93891.1;Parent=gene-HMPREF0889_0288;Dbxref=NCBI_GP:EFD93891.1;Name=EFD93891.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0288;product=hypothetical protein;protein_id=EFD93891.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 101765 103228 . - . ID=gene-HMPREF0889_0289;Name=HMPREF0889_0289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0289 GCA_000177555.1|ADGP01000020.1 Genbank CDS 101765 103228 . - 0 ID=cds-EFD93892.1;Parent=gene-HMPREF0889_0289;Dbxref=NCBI_GP:EFD93892.1;Name=EFD93892.1;gbkey=CDS;locus_tag=HMPREF0889_0289;product=hypothetical protein;protein_id=EFD93892.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 103218 103805 . - . ID=gene-HMPREF0889_0290;Name=HMPREF0889_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0290 GCA_000177555.1|ADGP01000020.1 Genbank CDS 103218 103805 . - 0 ID=cds-EFD93893.1;Parent=gene-HMPREF0889_0290;Dbxref=NCBI_GP:EFD93893.1;Name=EFD93893.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0290;product=hypothetical protein;protein_id=EFD93893.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 104138 104641 . + . ID=gene-HMPREF0889_0291;Name=HMPREF0889_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0291 GCA_000177555.1|ADGP01000020.1 Genbank CDS 104138 104641 . + 0 ID=cds-EFD93894.1;Parent=gene-HMPREF0889_0291;Dbxref=NCBI_GP:EFD93894.1;Name=EFD93894.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0291;product=hypothetical protein;protein_id=EFD93894.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 104631 104813 . + . ID=gene-HMPREF0889_0292;Name=HMPREF0889_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0292 GCA_000177555.1|ADGP01000020.1 Genbank CDS 104631 104813 . + 0 ID=cds-EFD93895.1;Parent=gene-HMPREF0889_0292;Dbxref=NCBI_GP:EFD93895.1;Name=EFD93895.1;gbkey=CDS;locus_tag=HMPREF0889_0292;product=hypothetical protein;protein_id=EFD93895.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 104810 105859 . + . ID=gene-HMPREF0889_0293;Name=HMPREF0889_0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0293 GCA_000177555.1|ADGP01000020.1 Genbank CDS 104810 105859 . + 0 ID=cds-EFD93896.1;Parent=gene-HMPREF0889_0293;Dbxref=NCBI_GP:EFD93896.1;Name=EFD93896.1;gbkey=CDS;locus_tag=HMPREF0889_0293;product=hypothetical protein;protein_id=EFD93896.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 105929 106510 . + . ID=gene-HMPREF0889_0294;Name=HMPREF0889_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0294 GCA_000177555.1|ADGP01000020.1 Genbank CDS 105929 106510 . + 0 ID=cds-EFD93897.1;Parent=gene-HMPREF0889_0294;Dbxref=NCBI_GP:EFD93897.1;Name=EFD93897.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0294;product=hypothetical protein;protein_id=EFD93897.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 106530 106904 . + . ID=gene-HMPREF0889_0295;Name=HMPREF0889_0295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0295 GCA_000177555.1|ADGP01000020.1 Genbank CDS 106530 106904 . + 0 ID=cds-EFD93898.1;Parent=gene-HMPREF0889_0295;Dbxref=NCBI_GP:EFD93898.1;Name=EFD93898.1;Note=identified by match to protein family HMM PF01402;gbkey=CDS;locus_tag=HMPREF0889_0295;product=Ribbon-helix-helix protein%2C CopG family;protein_id=EFD93898.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 106925 107350 . + . ID=gene-HMPREF0889_0296;Name=HMPREF0889_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0296 GCA_000177555.1|ADGP01000020.1 Genbank CDS 106925 107350 . + 0 ID=cds-EFD93899.1;Parent=gene-HMPREF0889_0296;Dbxref=NCBI_GP:EFD93899.1;Name=EFD93899.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0296;product=hypothetical protein;protein_id=EFD93899.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 107360 107689 . + . ID=gene-HMPREF0889_0297;Name=HMPREF0889_0297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0297 GCA_000177555.1|ADGP01000020.1 Genbank CDS 107360 107689 . + 0 ID=cds-EFD93900.1;Parent=gene-HMPREF0889_0297;Dbxref=NCBI_GP:EFD93900.1;Name=EFD93900.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0297;product=hypothetical protein;protein_id=EFD93900.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 107763 107981 . + . ID=gene-HMPREF0889_0299;Name=HMPREF0889_0299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0299 GCA_000177555.1|ADGP01000020.1 Genbank CDS 107763 107981 . + 0 ID=cds-EFD93901.1;Parent=gene-HMPREF0889_0299;Dbxref=NCBI_GP:EFD93901.1;Name=EFD93901.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0299;product=hypothetical protein;protein_id=EFD93901.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 107967 108368 . - . ID=gene-HMPREF0889_0298;Name=HMPREF0889_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0298 GCA_000177555.1|ADGP01000020.1 Genbank CDS 107967 108368 . - 0 ID=cds-EFD93902.1;Parent=gene-HMPREF0889_0298;Dbxref=NCBI_GP:EFD93902.1;Name=EFD93902.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0298;product=hypothetical protein;protein_id=EFD93902.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 108365 108790 . - . ID=gene-HMPREF0889_0300;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0300 GCA_000177555.1|ADGP01000020.1 Genbank CDS 108365 108790 . - 0 ID=cds-EFD93903.1;Parent=gene-HMPREF0889_0300;Dbxref=NCBI_GP:EFD93903.1;Name=EFD93903.1;Note=identified by match to protein family HMM PF05866;gbkey=CDS;gene=rusA;locus_tag=HMPREF0889_0300;product=crossover junction endodeoxyribonuclease RusA;protein_id=EFD93903.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 108885 109268 . - . ID=gene-HMPREF0889_0301;Name=HMPREF0889_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0301 GCA_000177555.1|ADGP01000020.1 Genbank CDS 108885 109268 . - 0 ID=cds-EFD93904.1;Parent=gene-HMPREF0889_0301;Dbxref=NCBI_GP:EFD93904.1;Name=EFD93904.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;locus_tag=HMPREF0889_0301;product=single-strand binding family protein;protein_id=EFD93904.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 109265 109636 . - . ID=gene-HMPREF0889_0302;Name=HMPREF0889_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0302 GCA_000177555.1|ADGP01000020.1 Genbank CDS 109265 109636 . - 0 ID=cds-EFD93905.1;Parent=gene-HMPREF0889_0302;Dbxref=NCBI_GP:EFD93905.1;Name=EFD93905.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0302;product=hypothetical protein;protein_id=EFD93905.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 109626 110144 . - . ID=gene-HMPREF0889_0303;Name=HMPREF0889_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0303 GCA_000177555.1|ADGP01000020.1 Genbank CDS 109626 110144 . - 0 ID=cds-EFD93906.1;Parent=gene-HMPREF0889_0303;Dbxref=NCBI_GP:EFD93906.1;Name=EFD93906.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0303;product=hypothetical protein;protein_id=EFD93906.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 110141 110638 . - . ID=gene-HMPREF0889_0304;Name=HMPREF0889_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0304 GCA_000177555.1|ADGP01000020.1 Genbank CDS 110141 110638 . - 0 ID=cds-EFD93907.1;Parent=gene-HMPREF0889_0304;Dbxref=NCBI_GP:EFD93907.1;Name=EFD93907.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0304;product=hypothetical protein;protein_id=EFD93907.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 110676 111719 . - . ID=gene-HMPREF0889_0305;Name=HMPREF0889_0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0305 GCA_000177555.1|ADGP01000020.1 Genbank CDS 110676 111719 . - 0 ID=cds-EFD93908.1;Parent=gene-HMPREF0889_0305;Dbxref=NCBI_GP:EFD93908.1;Name=EFD93908.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0305;product=hypothetical protein;protein_id=EFD93908.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 111733 112014 . - . ID=gene-HMPREF0889_0306;Name=HMPREF0889_0306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0306 GCA_000177555.1|ADGP01000020.1 Genbank CDS 111733 112014 . - 0 ID=cds-EFD93909.1;Parent=gene-HMPREF0889_0306;Dbxref=NCBI_GP:EFD93909.1;Name=EFD93909.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0306;product=hypothetical protein;protein_id=EFD93909.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 112016 112288 . - . ID=gene-HMPREF0889_0307;Name=HMPREF0889_0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0307 GCA_000177555.1|ADGP01000020.1 Genbank CDS 112016 112288 . - 0 ID=cds-EFD93910.1;Parent=gene-HMPREF0889_0307;Dbxref=NCBI_GP:EFD93910.1;Name=EFD93910.1;Note=identified by match to protein family HMM PF01844;gbkey=CDS;locus_tag=HMPREF0889_0307;product=HNH endonuclease domain protein;protein_id=EFD93910.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 112306 112707 . - . ID=gene-HMPREF0889_0308;Name=HMPREF0889_0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0308 GCA_000177555.1|ADGP01000020.1 Genbank CDS 112306 112707 . - 0 ID=cds-EFD93911.1;Parent=gene-HMPREF0889_0308;Dbxref=NCBI_GP:EFD93911.1;Name=EFD93911.1;gbkey=CDS;locus_tag=HMPREF0889_0308;product=hypothetical protein;protein_id=EFD93911.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 112788 113447 . - . ID=gene-HMPREF0889_0309;Name=HMPREF0889_0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0309 GCA_000177555.1|ADGP01000020.1 Genbank CDS 112788 113447 . - 0 ID=cds-EFD93912.1;Parent=gene-HMPREF0889_0309;Dbxref=NCBI_GP:EFD93912.1;Name=EFD93912.1;Note=identified by match to protein family HMM PF04404;gbkey=CDS;locus_tag=HMPREF0889_0309;product=Erf family protein;protein_id=EFD93912.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 113464 113952 . - . ID=gene-HMPREF0889_0310;Name=HMPREF0889_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0310 GCA_000177555.1|ADGP01000020.1 Genbank CDS 113464 113952 . - 0 ID=cds-EFD93913.1;Parent=gene-HMPREF0889_0310;Dbxref=NCBI_GP:EFD93913.1;Name=EFD93913.1;Note=identified by match to protein family HMM PF05565;gbkey=CDS;locus_tag=HMPREF0889_0310;product=siphovirus Gp157;protein_id=EFD93913.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 113963 114259 . - . ID=gene-HMPREF0889_0311;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0311 GCA_000177555.1|ADGP01000020.1 Genbank CDS 113963 114259 . - 0 ID=cds-EFD93914.1;Parent=gene-HMPREF0889_0311;Dbxref=NCBI_GP:EFD93914.1;Name=EFD93914.1;Note=identified by match to protein family HMM PF03819;gbkey=CDS;gene=mazG;locus_tag=HMPREF0889_0311;product=MazG nucleotide pyrophosphohydrolase domain protein;protein_id=EFD93914.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 114260 114496 . - . ID=gene-HMPREF0889_0312;Name=HMPREF0889_0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0312 GCA_000177555.1|ADGP01000020.1 Genbank CDS 114260 114496 . - 0 ID=cds-EFD93915.1;Parent=gene-HMPREF0889_0312;Dbxref=NCBI_GP:EFD93915.1;Name=EFD93915.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0312;product=hypothetical protein;protein_id=EFD93915.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 114510 114722 . - . ID=gene-HMPREF0889_0313;Name=HMPREF0889_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0313 GCA_000177555.1|ADGP01000020.1 Genbank CDS 114510 114722 . - 0 ID=cds-EFD93916.1;Parent=gene-HMPREF0889_0313;Dbxref=NCBI_GP:EFD93916.1;Name=EFD93916.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0313;product=hypothetical protein;protein_id=EFD93916.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 114737 115060 . - . ID=gene-HMPREF0889_0314;Name=HMPREF0889_0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0314 GCA_000177555.1|ADGP01000020.1 Genbank CDS 114737 115060 . - 0 ID=cds-EFD93917.1;Parent=gene-HMPREF0889_0314;Dbxref=NCBI_GP:EFD93917.1;Name=EFD93917.1;gbkey=CDS;locus_tag=HMPREF0889_0314;product=hypothetical protein;protein_id=EFD93917.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 115455 116144 . - . ID=gene-HMPREF0889_0315;Name=HMPREF0889_0315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0315 GCA_000177555.1|ADGP01000020.1 Genbank CDS 115455 116144 . - 0 ID=cds-EFD93918.1;Parent=gene-HMPREF0889_0315;Dbxref=NCBI_GP:EFD93918.1;Name=EFD93918.1;gbkey=CDS;locus_tag=HMPREF0889_0315;product=hypothetical protein;protein_id=EFD93918.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 116522 116722 . - . ID=gene-HMPREF0889_0316;Name=HMPREF0889_0316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0316 GCA_000177555.1|ADGP01000020.1 Genbank CDS 116522 116722 . - 0 ID=cds-EFD93919.1;Parent=gene-HMPREF0889_0316;Dbxref=NCBI_GP:EFD93919.1;Name=EFD93919.1;gbkey=CDS;locus_tag=HMPREF0889_0316;product=hypothetical protein;protein_id=EFD93919.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 116903 117583 . + . ID=gene-HMPREF0889_0317;Name=HMPREF0889_0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0317 GCA_000177555.1|ADGP01000020.1 Genbank CDS 116903 117583 . + 0 ID=cds-EFD93920.1;Parent=gene-HMPREF0889_0317;Dbxref=NCBI_GP:EFD93920.1;Name=EFD93920.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF0889_0317;product=DNA-binding helix-turn-helix protein;protein_id=EFD93920.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 117680 118753 . + . ID=gene-HMPREF0889_0318;Name=HMPREF0889_0318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0318 GCA_000177555.1|ADGP01000020.1 Genbank CDS 117680 118753 . + 0 ID=cds-EFD93921.1;Parent=gene-HMPREF0889_0318;Dbxref=NCBI_GP:EFD93921.1;Name=EFD93921.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF0889_0318;product=site-specific recombinase%2C phage integrase family;protein_id=EFD93921.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 119027 120718 . - . ID=gene-HMPREF0889_0319;Name=HMPREF0889_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0319 GCA_000177555.1|ADGP01000020.1 Genbank CDS 119027 120718 . - 0 ID=cds-EFD93922.1;Parent=gene-HMPREF0889_0319;Dbxref=NCBI_GP:EFD93922.1;Name=EFD93922.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0319;product=hypothetical protein;protein_id=EFD93922.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 120940 121965 . - . ID=gene-HMPREF0889_0320;Name=HMPREF0889_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0320 GCA_000177555.1|ADGP01000020.1 Genbank CDS 120940 121965 . - 0 ID=cds-EFD93923.1;Parent=gene-HMPREF0889_0320;Dbxref=NCBI_GP:EFD93923.1;Name=EFD93923.1;gbkey=CDS;locus_tag=HMPREF0889_0320;product=hypothetical protein;protein_id=EFD93923.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 121962 123113 . - . ID=gene-HMPREF0889_0321;Name=HMPREF0889_0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0321 GCA_000177555.1|ADGP01000020.1 Genbank CDS 121962 123113 . - 0 ID=cds-EFD93924.1;Parent=gene-HMPREF0889_0321;Dbxref=NCBI_GP:EFD93924.1;Name=EFD93924.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_0321;product=hypothetical protein;protein_id=EFD93924.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 123209 124192 . - . ID=gene-HMPREF0889_0322;Name=HMPREF0889_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0322 GCA_000177555.1|ADGP01000020.1 Genbank CDS 123209 124192 . - 0 ID=cds-EFD93925.1;Parent=gene-HMPREF0889_0322;Dbxref=NCBI_GP:EFD93925.1;Name=EFD93925.1;Note=identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00520;gbkey=CDS;locus_tag=HMPREF0889_0322;product=L-asparaginase%2C type II;protein_id=EFD93925.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 124376 125113 . - . ID=gene-HMPREF0889_0323;Name=HMPREF0889_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0323 GCA_000177555.1|ADGP01000020.1 Genbank CDS 124376 125113 . - 0 ID=cds-EFD93926.1;Parent=gene-HMPREF0889_0323;Dbxref=NCBI_GP:EFD93926.1;Name=EFD93926.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0323;product=hypothetical protein;protein_id=EFD93926.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 125140 125571 . - . ID=gene-HMPREF0889_0324;Name=HMPREF0889_0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0324 GCA_000177555.1|ADGP01000020.1 Genbank CDS 125140 125571 . - 0 ID=cds-EFD93927.1;Parent=gene-HMPREF0889_0324;Dbxref=NCBI_GP:EFD93927.1;Name=EFD93927.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0324;product=hypothetical protein;protein_id=EFD93927.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 125580 126614 . - . ID=gene-HMPREF0889_0325;Name=HMPREF0889_0325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0325 GCA_000177555.1|ADGP01000020.1 Genbank CDS 125580 126614 . - 0 ID=cds-EFD93928.1;Parent=gene-HMPREF0889_0325;Dbxref=NCBI_GP:EFD93928.1;Name=EFD93928.1;gbkey=CDS;locus_tag=HMPREF0889_0325;product=hypothetical protein;protein_id=EFD93928.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 126634 127932 . - . ID=gene-HMPREF0889_0326;Name=nfeD;gbkey=Gene;gene=nfeD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0326 GCA_000177555.1|ADGP01000020.1 Genbank CDS 126634 127932 . - 0 ID=cds-EFD93929.1;Parent=gene-HMPREF0889_0326;Dbxref=NCBI_GP:EFD93929.1;Name=EFD93929.1;Note=identified by match to protein family HMM PF01957;gbkey=CDS;gene=nfeD;locus_tag=HMPREF0889_0326;product=nodulation efficiency protein D;protein_id=EFD93929.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 127948 128361 . - . ID=gene-HMPREF0889_0327;Name=HMPREF0889_0327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0327 GCA_000177555.1|ADGP01000020.1 Genbank CDS 127948 128361 . - 0 ID=cds-EFD93930.1;Parent=gene-HMPREF0889_0327;Dbxref=NCBI_GP:EFD93930.1;Name=EFD93930.1;gbkey=CDS;locus_tag=HMPREF0889_0327;product=hypothetical protein;protein_id=EFD93930.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 128445 129035 . - . ID=gene-HMPREF0889_0328;Name=HMPREF0889_0328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0328 GCA_000177555.1|ADGP01000020.1 Genbank CDS 128445 129035 . - 0 ID=cds-EFD93931.1;Parent=gene-HMPREF0889_0328;Dbxref=NCBI_GP:EFD93931.1;Name=EFD93931.1;gbkey=CDS;locus_tag=HMPREF0889_0328;product=hypothetical protein;protein_id=EFD93931.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 129045 130034 . - . ID=gene-HMPREF0889_0329;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0329 GCA_000177555.1|ADGP01000020.1 Genbank CDS 129045 130034 . - 0 ID=cds-EFD93932.1;Parent=gene-HMPREF0889_0329;Dbxref=NCBI_GP:EFD93932.1;Name=EFD93932.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS;locus_tag=HMPREF0889_0329;product=tryptophan--tRNA ligase;protein_id=EFD93932.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank sequence_feature 130084 130307 . - . ID=id-ADGP01000020.1:130084..130307;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000020.1 Genbank gene 130494 131756 . + . ID=gene-HMPREF0889_0331;Name=HMPREF0889_0331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0331 GCA_000177555.1|ADGP01000020.1 Genbank CDS 130494 131756 . + 0 ID=cds-EFD93933.1;Parent=gene-HMPREF0889_0331;Dbxref=NCBI_GP:EFD93933.1;Name=EFD93933.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF0889_0331;product=DEAD/DEAH box helicase;protein_id=EFD93933.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 131767 132453 . + . ID=gene-HMPREF0889_0332;Name=HMPREF0889_0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0332 GCA_000177555.1|ADGP01000020.1 Genbank CDS 131767 132453 . + 0 ID=cds-EFD93934.1;Parent=gene-HMPREF0889_0332;Dbxref=NCBI_GP:EFD93934.1;Name=EFD93934.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0332;product=hypothetical protein;protein_id=EFD93934.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 132565 133152 . + . ID=gene-HMPREF0889_0333;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0333 GCA_000177555.1|ADGP01000020.1 Genbank CDS 132565 133152 . + 0 ID=cds-EFD93935.1;Parent=gene-HMPREF0889_0333;Dbxref=NCBI_GP:EFD93935.1;Name=EFD93935.1;Note=identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;locus_tag=HMPREF0889_0333;product=ribosomal protein S4;protein_id=EFD93935.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 133219 133473 . - . ID=gene-HMPREF0889_0334;Name=HMPREF0889_0334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0334 GCA_000177555.1|ADGP01000020.1 Genbank CDS 133219 133473 . - 0 ID=cds-EFD93936.1;Parent=gene-HMPREF0889_0334;Dbxref=NCBI_GP:EFD93936.1;Name=EFD93936.1;gbkey=CDS;locus_tag=HMPREF0889_0334;product=hypothetical protein;protein_id=EFD93936.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 133654 135258 . - . ID=gene-HMPREF0889_0335;Name=HMPREF0889_0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0335 GCA_000177555.1|ADGP01000020.1 Genbank CDS 133654 135258 . - 0 ID=cds-EFD93937.1;Parent=gene-HMPREF0889_0335;Dbxref=NCBI_GP:EFD93937.1;Name=EFD93937.1;Note=identified by match to protein family HMM PF02652;gbkey=CDS;locus_tag=HMPREF0889_0335;product=transporter%2C lactate permease (LctP) family;protein_id=EFD93937.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 135677 135790 . - . ID=gene-HMPREF0889_0336;Name=HMPREF0889_0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0336 GCA_000177555.1|ADGP01000020.1 Genbank CDS 135677 135790 . - 0 ID=cds-EFD93938.1;Parent=gene-HMPREF0889_0336;Dbxref=NCBI_GP:EFD93938.1;Name=EFD93938.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0336;product=hypothetical protein;protein_id=EFD93938.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 135980 136630 . + . ID=gene-HMPREF0889_0337;Name=HMPREF0889_0337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0337 GCA_000177555.1|ADGP01000020.1 Genbank CDS 135980 136630 . + 0 ID=cds-EFD93939.1;Parent=gene-HMPREF0889_0337;Dbxref=NCBI_GP:EFD93939.1;Name=EFD93939.1;gbkey=CDS;locus_tag=HMPREF0889_0337;product=hypothetical protein;protein_id=EFD93939.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 136828 139626 . - . ID=gene-HMPREF0889_0338;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0338 GCA_000177555.1|ADGP01000020.1 Genbank CDS 136828 139626 . - 0 ID=cds-EFD93940.1;Parent=gene-HMPREF0889_0338;Dbxref=NCBI_GP:EFD93940.1;Name=EFD93940.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;locus_tag=HMPREF0889_0338;product=isoleucine--tRNA ligase;protein_id=EFD93940.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank sequence_feature 139661 139863 . - . ID=id-ADGP01000020.1:139661..139863;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000020.1 Genbank gene 139935 141338 . - . ID=gene-HMPREF0889_0340;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0340 GCA_000177555.1|ADGP01000020.1 Genbank CDS 139935 141338 . - 0 ID=cds-EFD93941.1;Parent=gene-HMPREF0889_0340;Dbxref=NCBI_GP:EFD93941.1;Name=EFD93941.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF0889_0340;product=amino acid carrier protein;protein_id=EFD93941.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 141335 141457 . - . ID=gene-HMPREF0889_0341;Name=HMPREF0889_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0341 GCA_000177555.1|ADGP01000020.1 Genbank CDS 141335 141457 . - 0 ID=cds-EFD93942.1;Parent=gene-HMPREF0889_0341;Dbxref=NCBI_GP:EFD93942.1;Name=EFD93942.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0341;product=hypothetical protein;protein_id=EFD93942.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 141773 142501 . + . ID=gene-HMPREF0889_0342;Name=HMPREF0889_0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0342 GCA_000177555.1|ADGP01000020.1 Genbank CDS 141773 142501 . + 0 ID=cds-EFD93943.1;Parent=gene-HMPREF0889_0342;Dbxref=NCBI_GP:EFD93943.1;Name=EFD93943.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;locus_tag=HMPREF0889_0342;product=transcriptional regulator%2C Sir2 family;protein_id=EFD93943.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 142638 145010 . - . ID=gene-HMPREF0889_0343;Name=HMPREF0889_0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0343 GCA_000177555.1|ADGP01000020.1 Genbank CDS 142638 145010 . - 0 ID=cds-EFD93944.1;Parent=gene-HMPREF0889_0343;Dbxref=NCBI_GP:EFD93944.1;Name=EFD93944.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069;gbkey=CDS;locus_tag=HMPREF0889_0343;product=recombination and DNA strand exchange inhibitor protein;protein_id=EFD93944.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 145023 147428 . - . ID=gene-HMPREF0889_0344;Name=HMPREF0889_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0344 GCA_000177555.1|ADGP01000020.1 Genbank CDS 145023 147428 . - 0 ID=cds-EFD93945.1;Parent=gene-HMPREF0889_0344;Dbxref=NCBI_GP:EFD93945.1;Name=EFD93945.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=HMPREF0889_0344;product=peptidase%2C U32 family;protein_id=EFD93945.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 147587 148054 . - . ID=gene-HMPREF0889_0345;Name=HMPREF0889_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0345 GCA_000177555.1|ADGP01000020.1 Genbank CDS 147587 148054 . - 0 ID=cds-EFD93946.1;Parent=gene-HMPREF0889_0345;Dbxref=NCBI_GP:EFD93946.1;Name=EFD93946.1;gbkey=CDS;locus_tag=HMPREF0889_0345;product=hypothetical protein;protein_id=EFD93946.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 148066 148557 . - . ID=gene-HMPREF0889_0346;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0346 GCA_000177555.1|ADGP01000020.1 Genbank CDS 148066 148557 . - 0 ID=cds-EFD93947.1;Parent=gene-HMPREF0889_0346;Dbxref=NCBI_GP:EFD93947.1;Name=EFD93947.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510;gbkey=CDS;gene=coaD;locus_tag=HMPREF0889_0346;product=pantetheine-phosphate adenylyltransferase;protein_id=EFD93947.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 148559 149146 . - . ID=gene-HMPREF0889_0347;Name=HMPREF0889_0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0347 GCA_000177555.1|ADGP01000020.1 Genbank CDS 148559 149146 . - 0 ID=cds-EFD93948.1;Parent=gene-HMPREF0889_0347;Dbxref=NCBI_GP:EFD93948.1;Name=EFD93948.1;Note=identified by match to protein family HMM PF03602;gbkey=CDS;locus_tag=HMPREF0889_0347;product=RNA methyltransferase%2C RsmD family;protein_id=EFD93948.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 149196 149813 . - . ID=gene-HMPREF0889_0348;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=HMPREF0889_0348 GCA_000177555.1|ADGP01000020.1 Genbank CDS 149196 149813 . - 0 ID=cds-EFD93949.1;Parent=gene-HMPREF0889_0348;Dbxref=NCBI_GP:EFD93949.1;Name=EFD93949.1;Note=identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023;gbkey=CDS;gene=plsY;locus_tag=HMPREF0889_0348;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=EFD93949.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 149810 151141 . - . ID=gene-HMPREF0889_0349;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=HMPREF0889_0349 GCA_000177555.1|ADGP01000020.1 Genbank CDS 149810 151141 . - 0 ID=cds-EFD93950.1;Parent=gene-HMPREF0889_0349;Dbxref=NCBI_GP:EFD93950.1;Name=EFD93950.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594;gbkey=CDS;gene=der;locus_tag=HMPREF0889_0349;product=ribosome biogenesis GTPase Der;protein_id=EFD93950.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 151262 153169 . - . ID=gene-HMPREF0889_0350;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF0889_0350 GCA_000177555.1|ADGP01000020.1 Genbank CDS 151262 153169 . - 0 ID=cds-EFD93951.1;Parent=gene-HMPREF0889_0350;Dbxref=NCBI_GP:EFD93951.1;Name=EFD93951.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF02401%3B match to protein family HMM TIGR00216;gbkey=CDS;gene=ispH;locus_tag=HMPREF0889_0350;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=EFD93951.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 153166 153780 . - . ID=gene-HMPREF0889_0351;Name=HMPREF0889_0351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0351 GCA_000177555.1|ADGP01000020.1 Genbank CDS 153166 153780 . - 0 ID=cds-EFD93952.1;Parent=gene-HMPREF0889_0351;Dbxref=NCBI_GP:EFD93952.1;Name=EFD93952.1;Note=identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530;gbkey=CDS;locus_tag=HMPREF0889_0351;product=Acyltransferase;protein_id=EFD93952.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 153777 154448 . - . ID=gene-HMPREF0889_0352;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=HMPREF0889_0352 GCA_000177555.1|ADGP01000020.1 Genbank CDS 153777 154448 . - 0 ID=cds-EFD93953.1;Parent=gene-HMPREF0889_0352;Dbxref=NCBI_GP:EFD93953.1;Name=EFD93953.1;Note=identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017;gbkey=CDS;gene=cmk;locus_tag=HMPREF0889_0352;product=cytidylate kinase;protein_id=EFD93953.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 154445 155686 . - . ID=gene-HMPREF0889_0353;Name=HMPREF0889_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0353 GCA_000177555.1|ADGP01000020.1 Genbank CDS 154445 155686 . - 0 ID=cds-EFD93954.1;Parent=gene-HMPREF0889_0353;Dbxref=NCBI_GP:EFD93954.1;Name=EFD93954.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00275;gbkey=CDS;locus_tag=HMPREF0889_0353;product=flavoprotein family protein;protein_id=EFD93954.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 155702 156418 . - . ID=gene-HMPREF0889_0354;Name=HMPREF0889_0354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0354 GCA_000177555.1|ADGP01000020.1 Genbank CDS 155702 156418 . - 0 ID=cds-EFD93955.1;Parent=gene-HMPREF0889_0354;Dbxref=NCBI_GP:EFD93955.1;Name=EFD93955.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;locus_tag=HMPREF0889_0354;product=pseudouridylate synthase;protein_id=EFD93955.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 156390 157016 . - . ID=gene-HMPREF0889_0355;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0355 GCA_000177555.1|ADGP01000020.1 Genbank CDS 156390 157016 . - 0 ID=cds-EFD93956.1;Parent=gene-HMPREF0889_0355;Dbxref=NCBI_GP:EFD93956.1;Name=EFD93956.1;Note=identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;locus_tag=HMPREF0889_0355;product=segregation and condensation protein B;protein_id=EFD93956.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 156979 157773 . - . ID=gene-HMPREF0889_0356;Name=HMPREF0889_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0356 GCA_000177555.1|ADGP01000020.1 Genbank CDS 156979 157773 . - 0 ID=cds-EFD93957.1;Parent=gene-HMPREF0889_0356;Dbxref=NCBI_GP:EFD93957.1;Name=EFD93957.1;Note=identified by match to protein family HMM PF02616;gbkey=CDS;locus_tag=HMPREF0889_0356;product=ScpA/B protein;protein_id=EFD93957.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 157837 157925 . - . ID=gene-HMPREF0889_0357;Name=HMPREF0889_0357;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0357 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 157837 157925 . - . ID=rna-HMPREF0889_0357;Parent=gene-HMPREF0889_0357;gbkey=tRNA;locus_tag=HMPREF0889_0357;product=tRNA-Leu GCA_000177555.1|ADGP01000020.1 Genbank exon 157837 157925 . - . ID=exon-HMPREF0889_0357-1;Parent=rna-HMPREF0889_0357;gbkey=tRNA;locus_tag=HMPREF0889_0357;product=tRNA-Leu GCA_000177555.1|ADGP01000020.1 Genbank gene 157942 158015 . - . ID=gene-HMPREF0889_0358;Name=HMPREF0889_0358;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0358 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 157942 158015 . - . ID=rna-HMPREF0889_0358;Parent=gene-HMPREF0889_0358;gbkey=tRNA;locus_tag=HMPREF0889_0358;product=tRNA-Cys GCA_000177555.1|ADGP01000020.1 Genbank exon 157942 158015 . - . ID=exon-HMPREF0889_0358-1;Parent=rna-HMPREF0889_0358;gbkey=tRNA;locus_tag=HMPREF0889_0358;product=tRNA-Cys GCA_000177555.1|ADGP01000020.1 Genbank gene 158019 158093 . - . ID=gene-HMPREF0889_0359;Name=HMPREF0889_0359;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0359 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 158019 158093 . - . ID=rna-HMPREF0889_0359;Parent=gene-HMPREF0889_0359;gbkey=tRNA;locus_tag=HMPREF0889_0359;product=tRNA-Gly GCA_000177555.1|ADGP01000020.1 Genbank exon 158019 158093 . - . ID=exon-HMPREF0889_0359-1;Parent=rna-HMPREF0889_0359;gbkey=tRNA;locus_tag=HMPREF0889_0359;product=tRNA-Gly GCA_000177555.1|ADGP01000020.1 Genbank gene 158102 158177 . - . ID=gene-HMPREF0889_0360;Name=HMPREF0889_0360;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0360 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 158102 158177 . - . ID=rna-HMPREF0889_0360;Parent=gene-HMPREF0889_0360;gbkey=tRNA;locus_tag=HMPREF0889_0360;product=tRNA-Phe GCA_000177555.1|ADGP01000020.1 Genbank exon 158102 158177 . - . ID=exon-HMPREF0889_0360-1;Parent=rna-HMPREF0889_0360;gbkey=tRNA;locus_tag=HMPREF0889_0360;product=tRNA-Phe GCA_000177555.1|ADGP01000020.1 Genbank gene 158183 158259 . - . ID=gene-HMPREF0889_0361;Name=HMPREF0889_0361;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0361 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 158183 158259 . - . ID=rna-HMPREF0889_0361;Parent=gene-HMPREF0889_0361;gbkey=tRNA;locus_tag=HMPREF0889_0361;product=tRNA-Asp GCA_000177555.1|ADGP01000020.1 Genbank exon 158183 158259 . - . ID=exon-HMPREF0889_0361-1;Parent=rna-HMPREF0889_0361;gbkey=tRNA;locus_tag=HMPREF0889_0361;product=tRNA-Asp GCA_000177555.1|ADGP01000020.1 Genbank gene 158457 159992 . - . ID=gene-HMPREF0889_0362;Name=HMPREF0889_0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0362 GCA_000177555.1|ADGP01000020.1 Genbank CDS 158457 159992 . - 0 ID=cds-EFD93958.1;Parent=gene-HMPREF0889_0362;Dbxref=NCBI_GP:EFD93958.1;Name=EFD93958.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319;gbkey=CDS;locus_tag=HMPREF0889_0362;product=YmdA/YtgF family protein;protein_id=EFD93958.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 160214 160633 . - . ID=gene-HMPREF0889_0363;Name=HMPREF0889_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0363 GCA_000177555.1|ADGP01000020.1 Genbank CDS 160214 160633 . - 0 ID=cds-EFD93959.1;Parent=gene-HMPREF0889_0363;Dbxref=NCBI_GP:EFD93959.1;Name=EFD93959.1;gbkey=CDS;locus_tag=HMPREF0889_0363;product=hypothetical protein;protein_id=EFD93959.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 160630 161676 . - . ID=gene-HMPREF0889_0364;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0364 GCA_000177555.1|ADGP01000020.1 Genbank CDS 160630 161676 . - 0 ID=cds-EFD93960.1;Parent=gene-HMPREF0889_0364;Dbxref=NCBI_GP:EFD93960.1;Name=EFD93960.1;Note=identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012;gbkey=CDS;gene=recA;locus_tag=HMPREF0889_0364;product=RecA protein;protein_id=EFD93960.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 161689 162942 . - . ID=gene-HMPREF0889_0365;Name=HMPREF0889_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0365 GCA_000177555.1|ADGP01000020.1 Genbank CDS 161689 162942 . - 0 ID=cds-EFD93961.1;Parent=gene-HMPREF0889_0365;Dbxref=NCBI_GP:EFD93961.1;Name=EFD93961.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200;gbkey=CDS;locus_tag=HMPREF0889_0365;product=competence/damage-inducible domain protein CinA;protein_id=EFD93961.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 162959 164290 . - . ID=gene-HMPREF0889_0366;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=HMPREF0889_0366 GCA_000177555.1|ADGP01000020.1 Genbank CDS 162959 164290 . - 0 ID=cds-EFD93962.1;Parent=gene-HMPREF0889_0366;Dbxref=NCBI_GP:EFD93962.1;Name=EFD93962.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125;gbkey=CDS;gene=rimO;locus_tag=HMPREF0889_0366;product=ribosomal protein S12 methylthiotransferase RimO;protein_id=EFD93962.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 164291 165337 . - . ID=gene-HMPREF0889_0367;Name=HMPREF0889_0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0367 GCA_000177555.1|ADGP01000020.1 Genbank CDS 164291 165337 . - 0 ID=cds-EFD93963.1;Parent=gene-HMPREF0889_0367;Dbxref=NCBI_GP:EFD93963.1;Name=EFD93963.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0367;product=hypothetical protein;protein_id=EFD93963.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 165394 165771 . - . ID=gene-HMPREF0889_0368;Name=HMPREF0889_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0368 GCA_000177555.1|ADGP01000020.1 Genbank CDS 165394 165771 . - 0 ID=cds-EFD93964.1;Parent=gene-HMPREF0889_0368;Dbxref=NCBI_GP:EFD93964.1;Name=EFD93964.1;gbkey=CDS;locus_tag=HMPREF0889_0368;product=hypothetical protein;protein_id=EFD93964.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 165850 168312 . - . ID=gene-HMPREF0889_0369;Name=spoIIIE;gbkey=Gene;gene=spoIIIE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0369 GCA_000177555.1|ADGP01000020.1 Genbank CDS 165850 168312 . - 0 ID=cds-EFD93965.1;Parent=gene-HMPREF0889_0369;Dbxref=NCBI_GP:EFD93965.1;Name=EFD93965.1;Note=identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397;gbkey=CDS;gene=spoIIIE;locus_tag=HMPREF0889_0369;product=FtsK/SpoIIIE family protein;protein_id=EFD93965.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 168330 169649 . - . ID=gene-HMPREF0889_0370;Name=HMPREF0889_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0370 GCA_000177555.1|ADGP01000020.1 Genbank CDS 168330 169649 . - 0 ID=cds-EFD93966.1;Parent=gene-HMPREF0889_0370;Dbxref=NCBI_GP:EFD93966.1;Name=EFD93966.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF0889_0370;product=recombination factor protein RarA;protein_id=EFD93966.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 169745 169923 . - . ID=gene-HMPREF0889_0371;Name=HMPREF0889_0371;gbkey=Gene;gene_biotype=ncRNA;locus_tag=HMPREF0889_0371 GCA_000177555.1|ADGP01000020.1 Genbank ncRNA 169745 169923 . - . ID=rna-HMPREF0889_0371;Parent=gene-HMPREF0889_0371;Note=6S / SsrS RNA%3B Rfam score 84.87;gbkey=ncRNA;inference=nucleotide motif:RFAM:RF00013;locus_tag=HMPREF0889_0371;product=6S / SsrS RNA GCA_000177555.1|ADGP01000020.1 Genbank exon 169745 169923 . - . ID=exon-HMPREF0889_0371-1;Parent=rna-HMPREF0889_0371;Note=6S / SsrS RNA%3B Rfam score 84.87;gbkey=ncRNA;inference=nucleotide motif:RFAM:RF00013;locus_tag=HMPREF0889_0371;product=6S / SsrS RNA GCA_000177555.1|ADGP01000020.1 Genbank gene 170054 172054 . - . ID=gene-HMPREF0889_0372;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=HMPREF0889_0372 GCA_000177555.1|ADGP01000020.1 Genbank CDS 170054 172054 . - 0 ID=cds-EFD93967.1;Parent=gene-HMPREF0889_0372;Dbxref=NCBI_GP:EFD93967.1;Name=EFD93967.1;Note=identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232;gbkey=CDS;gene=tkt;locus_tag=HMPREF0889_0372;product=transketolase;protein_id=EFD93967.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 172173 173063 . - . ID=gene-HMPREF0889_0373;Name=HMPREF0889_0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0373 GCA_000177555.1|ADGP01000020.1 Genbank CDS 172173 173063 . - 0 ID=cds-EFD93968.1;Parent=gene-HMPREF0889_0373;Dbxref=NCBI_GP:EFD93968.1;Name=EFD93968.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF0889_0373;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EFD93968.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 173087 174106 . - . ID=gene-HMPREF0889_0374;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0374 GCA_000177555.1|ADGP01000020.1 Genbank CDS 173087 174106 . - 0 ID=cds-EFD93969.1;Parent=gene-HMPREF0889_0374;Dbxref=NCBI_GP:EFD93969.1;Name=EFD93969.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF04613%3B match to protein family HMM TIGR01853;gbkey=CDS;gene=lpxD;locus_tag=HMPREF0889_0374;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=EFD93969.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 174119 174538 . - . ID=gene-HMPREF0889_0375;Name=HMPREF0889_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0375 GCA_000177555.1|ADGP01000020.1 Genbank CDS 174119 174538 . - 0 ID=cds-EFD93970.1;Parent=gene-HMPREF0889_0375;Dbxref=NCBI_GP:EFD93970.1;Name=EFD93970.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF0889_0375;product=outer membrane protein;protein_id=EFD93970.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 174554 175447 . - . ID=gene-HMPREF0889_0376;Name=HMPREF0889_0376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0376 GCA_000177555.1|ADGP01000020.1 Genbank CDS 174554 175447 . - 0 ID=cds-EFD93971.1;Parent=gene-HMPREF0889_0376;Dbxref=NCBI_GP:EFD93971.1;Name=EFD93971.1;gbkey=CDS;locus_tag=HMPREF0889_0376;product=outer membrane protein;protein_id=EFD93971.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 175484 175969 . - . ID=gene-HMPREF0889_0377;Name=HMPREF0889_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0377 GCA_000177555.1|ADGP01000020.1 Genbank CDS 175484 175969 . - 0 ID=cds-EFD93972.1;Parent=gene-HMPREF0889_0377;Dbxref=NCBI_GP:EFD93972.1;Name=EFD93972.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF0889_0377;product=outer membrane protein;protein_id=EFD93972.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 175985 177259 . - . ID=gene-HMPREF0889_0378;Name=HMPREF0889_0378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0378 GCA_000177555.1|ADGP01000020.1 Genbank CDS 175985 177259 . - 0 ID=cds-EFD93973.1;Parent=gene-HMPREF0889_0378;Dbxref=NCBI_GP:EFD93973.1;Name=EFD93973.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0378;product=hypothetical protein;protein_id=EFD93973.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 177266 179323 . - . ID=gene-HMPREF0889_0379;Name=HMPREF0889_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0379 GCA_000177555.1|ADGP01000020.1 Genbank CDS 177266 179323 . - 0 ID=cds-EFD93974.1;Parent=gene-HMPREF0889_0379;Dbxref=NCBI_GP:EFD93974.1;Name=EFD93974.1;Note=identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244;gbkey=CDS;locus_tag=HMPREF0889_0379;product=outer membrane protein%2C OMP85 family;protein_id=EFD93974.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 179336 179893 . - . ID=gene-HMPREF0889_0380;Name=HMPREF0889_0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0380 GCA_000177555.1|ADGP01000020.1 Genbank CDS 179336 179893 . - 0 ID=cds-EFD93975.1;Parent=gene-HMPREF0889_0380;Dbxref=NCBI_GP:EFD93975.1;Name=EFD93975.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0380;product=hypothetical protein;protein_id=EFD93975.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 180009 180662 . - . ID=gene-HMPREF0889_0381;Name=HMPREF0889_0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0381 GCA_000177555.1|ADGP01000020.1 Genbank CDS 180009 180662 . - 0 ID=cds-EFD93976.1;Parent=gene-HMPREF0889_0381;Dbxref=NCBI_GP:EFD93976.1;Name=EFD93976.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937;gbkey=CDS;locus_tag=HMPREF0889_0381;product=Sigma-70 region 2;protein_id=EFD93976.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 180678 184973 . - . ID=gene-HMPREF0889_0382;Name=HMPREF0889_0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0382 GCA_000177555.1|ADGP01000020.1 Genbank CDS 180678 184973 . - 0 ID=cds-EFD93977.1;Parent=gene-HMPREF0889_0382;Dbxref=NCBI_GP:EFD93977.1;Name=EFD93977.1;Note=identified by match to protein family HMM PF04357;gbkey=CDS;locus_tag=HMPREF0889_0382;product=hypothetical protein;protein_id=EFD93977.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 185102 186589 . - . ID=gene-HMPREF0889_0383;Name=HMPREF0889_0383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0383 GCA_000177555.1|ADGP01000020.1 Genbank CDS 185102 186589 . - 0 ID=cds-EFD93978.1;Parent=gene-HMPREF0889_0383;Dbxref=NCBI_GP:EFD93978.1;Name=EFD93978.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF0889_0383;product=outer membrane efflux protein;protein_id=EFD93978.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 186611 187846 . - . ID=gene-HMPREF0889_0384;Name=HMPREF0889_0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0384 GCA_000177555.1|ADGP01000020.1 Genbank CDS 186611 187846 . - 0 ID=cds-EFD93979.1;Parent=gene-HMPREF0889_0384;Dbxref=NCBI_GP:EFD93979.1;Name=EFD93979.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;locus_tag=HMPREF0889_0384;product=putative virulence factor Mce family protein;protein_id=EFD93979.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 187830 188594 . - . ID=gene-HMPREF0889_0385;Name=HMPREF0889_0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0385 GCA_000177555.1|ADGP01000020.1 Genbank CDS 187830 188594 . - 0 ID=cds-EFD93980.1;Parent=gene-HMPREF0889_0385;Dbxref=NCBI_GP:EFD93980.1;Name=EFD93980.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0385;product=ABC transporter%2C ATP-binding protein;protein_id=EFD93980.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 188603 189364 . - . ID=gene-HMPREF0889_0386;Name=HMPREF0889_0386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0386 GCA_000177555.1|ADGP01000020.1 Genbank CDS 188603 189364 . - 0 ID=cds-EFD93981.1;Parent=gene-HMPREF0889_0386;Dbxref=NCBI_GP:EFD93981.1;Name=EFD93981.1;Note=identified by match to protein family HMM PF02405%3B match to protein family HMM TIGR00056;gbkey=CDS;locus_tag=HMPREF0889_0386;product=hypothetical protein;protein_id=EFD93981.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 189529 191484 . - . ID=gene-HMPREF0889_0387;Name=HMPREF0889_0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0387 GCA_000177555.1|ADGP01000020.1 Genbank CDS 189529 191484 . - 0 ID=cds-EFD93982.1;Parent=gene-HMPREF0889_0387;Dbxref=NCBI_GP:EFD93982.1;Name=EFD93982.1;gbkey=CDS;locus_tag=HMPREF0889_0387;product=hypothetical protein;protein_id=EFD93982.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 191497 191790 . - . ID=gene-HMPREF0889_0388;Name=HMPREF0889_0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0388 GCA_000177555.1|ADGP01000020.1 Genbank CDS 191497 191790 . - 0 ID=cds-EFD93983.1;Parent=gene-HMPREF0889_0388;Dbxref=NCBI_GP:EFD93983.1;Name=EFD93983.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0388;product=hypothetical protein;protein_id=EFD93983.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 191802 192779 . - . ID=gene-HMPREF0889_0389;Name=HMPREF0889_0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0389 GCA_000177555.1|ADGP01000020.1 Genbank CDS 191802 192779 . - 0 ID=cds-EFD93984.1;Parent=gene-HMPREF0889_0389;Dbxref=NCBI_GP:EFD93984.1;Name=EFD93984.1;Note=identified by match to protein family HMM PF06723%3B match to protein family HMM TIGR00904;gbkey=CDS;locus_tag=HMPREF0889_0389;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EFD93984.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 192856 194127 . - . ID=gene-HMPREF0889_0390;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0390 GCA_000177555.1|ADGP01000020.1 Genbank CDS 192856 194127 . - 0 ID=cds-EFD93985.1;Parent=gene-HMPREF0889_0390;Dbxref=NCBI_GP:EFD93985.1;Name=EFD93985.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA;locus_tag=HMPREF0889_0390;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=EFD93985.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 194218 194376 . - . ID=gene-HMPREF0889_0391;Name=HMPREF0889_0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0391 GCA_000177555.1|ADGP01000020.1 Genbank CDS 194218 194376 . - 0 ID=cds-EFD93986.1;Parent=gene-HMPREF0889_0391;Dbxref=NCBI_GP:EFD93986.1;Name=EFD93986.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0391;product=hypothetical protein;protein_id=EFD93986.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 194373 194954 . - . ID=gene-HMPREF0889_0392;Name=HMPREF0889_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0392 GCA_000177555.1|ADGP01000020.1 Genbank CDS 194373 194954 . - 0 ID=cds-EFD93987.1;Parent=gene-HMPREF0889_0392;Dbxref=NCBI_GP:EFD93987.1;Name=EFD93987.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF0889_0392;product=phosphoglycerate mutase family protein;protein_id=EFD93987.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 195027 198560 . - . ID=gene-HMPREF0889_0393;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0393 GCA_000177555.1|ADGP01000020.1 Genbank CDS 195027 198560 . - 0 ID=cds-EFD93988.1;Parent=gene-HMPREF0889_0393;Dbxref=NCBI_GP:EFD93988.1;Name=EFD93988.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF0889_0393;product=pyruvate synthase;protein_id=EFD93988.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 198772 199938 . - . ID=gene-HMPREF0889_0394;Name=HMPREF0889_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0394 GCA_000177555.1|ADGP01000020.1 Genbank CDS 198772 199938 . - 0 ID=cds-EFD93989.1;Parent=gene-HMPREF0889_0394;Dbxref=NCBI_GP:EFD93989.1;Name=EFD93989.1;Note=identified by match to protein family HMM PF02353%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;locus_tag=HMPREF0889_0394;product=Cyclopropane-fatty-acyl-phospholipid synthase;protein_id=EFD93989.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 199965 200792 . - . ID=gene-HMPREF0889_0395;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0395 GCA_000177555.1|ADGP01000020.1 Genbank CDS 199965 200792 . - 0 ID=cds-EFD93990.1;Parent=gene-HMPREF0889_0395;Dbxref=NCBI_GP:EFD93990.1;Name=EFD93990.1;Note=identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882;gbkey=CDS;gene=folD;locus_tag=HMPREF0889_0395;product=tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain protein;protein_id=EFD93990.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 200805 202808 . - . ID=gene-HMPREF0889_0396;Name=HMPREF0889_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0396 GCA_000177555.1|ADGP01000020.1 Genbank CDS 200805 202808 . - 0 ID=cds-EFD93991.1;Parent=gene-HMPREF0889_0396;Dbxref=NCBI_GP:EFD93991.1;Name=EFD93991.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793;gbkey=CDS;locus_tag=HMPREF0889_0396;product=penicillin-binding protein%2C transpeptidase domain protein;protein_id=EFD93991.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 202819 204159 . - . ID=gene-HMPREF0889_0397;Name=HMPREF0889_0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0397 GCA_000177555.1|ADGP01000020.1 Genbank CDS 202819 204159 . - 0 ID=cds-EFD93992.1;Parent=gene-HMPREF0889_0397;Dbxref=NCBI_GP:EFD93992.1;Name=EFD93992.1;Note=identified by match to protein family HMM PF01743;gbkey=CDS;locus_tag=HMPREF0889_0397;product=tRNA nucleotidyltransferase/poly(A) polymerase family protein;protein_id=EFD93992.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 204353 204880 . + . ID=gene-HMPREF0889_0398;Name=HMPREF0889_0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0398 GCA_000177555.1|ADGP01000020.1 Genbank CDS 204353 204880 . + 0 ID=cds-EFD93993.1;Parent=gene-HMPREF0889_0398;Dbxref=NCBI_GP:EFD93993.1;Name=EFD93993.1;Note=identified by match to protein family HMM PF02572;gbkey=CDS;locus_tag=HMPREF0889_0398;product=putative cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=EFD93993.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 204891 206102 . + . ID=gene-HMPREF0889_0399;Name=HMPREF0889_0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0399 GCA_000177555.1|ADGP01000020.1 Genbank CDS 204891 206102 . + 0 ID=cds-EFD93994.1;Parent=gene-HMPREF0889_0399;Dbxref=NCBI_GP:EFD93994.1;Name=EFD93994.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=HMPREF0889_0399;product=cation diffusion facilitator family transporter;protein_id=EFD93994.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 206186 206262 . - . ID=gene-HMPREF0889_0400;Name=HMPREF0889_0400;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0400 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 206186 206262 . - . ID=rna-HMPREF0889_0400;Parent=gene-HMPREF0889_0400;gbkey=tRNA;locus_tag=HMPREF0889_0400;product=tRNA-Ile GCA_000177555.1|ADGP01000020.1 Genbank exon 206186 206262 . - . ID=exon-HMPREF0889_0400-1;Parent=rna-HMPREF0889_0400;gbkey=tRNA;locus_tag=HMPREF0889_0400;product=tRNA-Ile GCA_000177555.1|ADGP01000020.1 Genbank gene 206365 206484 . - . ID=gene-HMPREF0889_0401;Name=HMPREF0889_0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0401 GCA_000177555.1|ADGP01000020.1 Genbank CDS 206365 206484 . - 0 ID=cds-EFD93995.1;Parent=gene-HMPREF0889_0401;Dbxref=NCBI_GP:EFD93995.1;Name=EFD93995.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0401;product=hypothetical protein;protein_id=EFD93995.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 206798 207019 . - . ID=gene-HMPREF0889_0402;Name=HMPREF0889_0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0402 GCA_000177555.1|ADGP01000020.1 Genbank CDS 206798 207019 . - 0 ID=cds-EFD93996.1;Parent=gene-HMPREF0889_0402;Dbxref=NCBI_GP:EFD93996.1;Name=EFD93996.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0402;product=hypothetical protein;protein_id=EFD93996.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 207254 208096 . - . ID=gene-HMPREF0889_0403;Name=HMPREF0889_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0403 GCA_000177555.1|ADGP01000020.1 Genbank CDS 207254 208096 . - 0 ID=cds-EFD93997.1;Parent=gene-HMPREF0889_0403;Dbxref=NCBI_GP:EFD93997.1;Name=EFD93997.1;gbkey=CDS;locus_tag=HMPREF0889_0403;product=hypothetical protein;protein_id=EFD93997.1;transl_table=11 GCA_000177555.1|ADGP01000020.1 Genbank gene 208263 208338 . - . ID=gene-HMPREF0889_0404;Name=HMPREF0889_0404;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0404 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 208263 208338 . - . ID=rna-HMPREF0889_0404;Parent=gene-HMPREF0889_0404;gbkey=tRNA;locus_tag=HMPREF0889_0404;product=tRNA-Val GCA_000177555.1|ADGP01000020.1 Genbank exon 208263 208338 . - . ID=exon-HMPREF0889_0404-1;Parent=rna-HMPREF0889_0404;gbkey=tRNA;locus_tag=HMPREF0889_0404;product=tRNA-Val GCA_000177555.1|ADGP01000020.1 Genbank gene 208343 208418 . - . ID=gene-HMPREF0889_0405;Name=HMPREF0889_0405;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0405 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 208343 208418 . - . ID=rna-HMPREF0889_0405;Parent=gene-HMPREF0889_0405;gbkey=tRNA;locus_tag=HMPREF0889_0405;product=tRNA-Glu GCA_000177555.1|ADGP01000020.1 Genbank exon 208343 208418 . - . ID=exon-HMPREF0889_0405-1;Parent=rna-HMPREF0889_0405;gbkey=tRNA;locus_tag=HMPREF0889_0405;product=tRNA-Glu GCA_000177555.1|ADGP01000020.1 Genbank gene 208419 208496 . - . ID=gene-HMPREF0889_0406;Name=HMPREF0889_0406;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0406 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 208419 208496 . - . ID=rna-HMPREF0889_0406;Parent=gene-HMPREF0889_0406;gbkey=tRNA;locus_tag=HMPREF0889_0406;product=tRNA-Asn GCA_000177555.1|ADGP01000020.1 Genbank exon 208419 208496 . - . ID=exon-HMPREF0889_0406-1;Parent=rna-HMPREF0889_0406;gbkey=tRNA;locus_tag=HMPREF0889_0406;product=tRNA-Asn GCA_000177555.1|ADGP01000020.1 Genbank gene 208420 208495 . - . ID=gene-HMPREF0889_0407;Name=HMPREF0889_0407;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0407 GCA_000177555.1|ADGP01000020.1 Genbank tRNA 208420 208495 . - . ID=rna-HMPREF0889_0407;Parent=gene-HMPREF0889_0407;gbkey=tRNA;locus_tag=HMPREF0889_0407;product=tRNA-Asn GCA_000177555.1|ADGP01000020.1 Genbank exon 208420 208495 . - . ID=exon-HMPREF0889_0407-1;Parent=rna-HMPREF0889_0407;gbkey=tRNA;locus_tag=HMPREF0889_0407;product=tRNA-Asn GCA_000177555.1|ADGP01000020.1 Genbank gene 209085 209774 . + . ID=gene-HMPREF0889_0408;Name=HMPREF0889_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0408 GCA_000177555.1|ADGP01000020.1 Genbank CDS 209085 209774 . + 0 ID=cds-EFD93998.1;Parent=gene-HMPREF0889_0408;Dbxref=NCBI_GP:EFD93998.1;Name=EFD93998.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF0889_0408;product=response regulator receiver domain protein;protein_id=EFD93998.1;transl_table=11 ##sequence-region ADGP01000019.1 1 156177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000019.1 Genbank region 1 156177 . + . ID=ADGP01000019.1:1..156177;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000019.1 Genbank gene 8 1024 . + . ID=gene-HMPREF0889_1546;Name=HMPREF0889_1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1546 GCA_000177555.1|ADGP01000019.1 Genbank CDS 8 1024 . + 0 ID=cds-EFD93999.1;Parent=gene-HMPREF0889_1546;Dbxref=NCBI_GP:EFD93999.1;Name=EFD93999.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1546;product=hypothetical protein;protein_id=EFD93999.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 1413 3905 . + . ID=gene-HMPREF0889_1547;Name=HMPREF0889_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1547 GCA_000177555.1|ADGP01000019.1 Genbank CDS 1413 3905 . + 0 ID=cds-EFD94000.1;Parent=gene-HMPREF0889_1547;Dbxref=NCBI_GP:EFD94000.1;Name=EFD94000.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_1547;product=Hep/Hag repeat protein;protein_id=EFD94000.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 4211 4738 . + . ID=gene-HMPREF0889_1548;Name=HMPREF0889_1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1548 GCA_000177555.1|ADGP01000019.1 Genbank CDS 4211 4738 . + 0 ID=cds-EFD94001.1;Parent=gene-HMPREF0889_1548;Dbxref=NCBI_GP:EFD94001.1;Name=EFD94001.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1548;product=hypothetical protein;protein_id=EFD94001.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 4947 9860 . + . ID=gene-HMPREF0889_1549;Name=HMPREF0889_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1549 GCA_000177555.1|ADGP01000019.1 Genbank CDS 4947 9860 . + 0 ID=cds-EFD94002.1;Parent=gene-HMPREF0889_1549;Dbxref=NCBI_GP:EFD94002.1;Name=EFD94002.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_1549;product=Hep/Hag repeat protein;protein_id=EFD94002.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 10012 11001 . + . ID=gene-HMPREF0889_1550;Name=HMPREF0889_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1550 GCA_000177555.1|ADGP01000019.1 Genbank CDS 10012 11001 . + 0 ID=cds-EFD94003.1;Parent=gene-HMPREF0889_1550;Dbxref=NCBI_GP:EFD94003.1;Name=EFD94003.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212;gbkey=CDS;locus_tag=HMPREF0889_1550;product=radical SAM protein%2C TIGR01212 family;protein_id=EFD94003.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 10985 11959 . + . ID=gene-HMPREF0889_1551;Name=HMPREF0889_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1551 GCA_000177555.1|ADGP01000019.1 Genbank CDS 10985 11959 . + 0 ID=cds-EFD94004.1;Parent=gene-HMPREF0889_1551;Dbxref=NCBI_GP:EFD94004.1;Name=EFD94004.1;Note=identified by match to protein family HMM PF02562;gbkey=CDS;locus_tag=HMPREF0889_1551;product=PhoH family protein;protein_id=EFD94004.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 11956 12429 . + . ID=gene-HMPREF0889_1552;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=HMPREF0889_1552 GCA_000177555.1|ADGP01000019.1 Genbank CDS 11956 12429 . + 0 ID=cds-EFD94005.1;Parent=gene-HMPREF0889_1552;Dbxref=NCBI_GP:EFD94005.1;Name=EFD94005.1;Note=identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;gene=ybeY;locus_tag=HMPREF0889_1552;product=translation metalloprotein YbeY;protein_id=EFD94005.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 12426 12818 . + . ID=gene-HMPREF0889_1553;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=HMPREF0889_1553 GCA_000177555.1|ADGP01000019.1 Genbank CDS 12426 12818 . + 0 ID=cds-EFD94006.1;Parent=gene-HMPREF0889_1553;Dbxref=NCBI_GP:EFD94006.1;Name=EFD94006.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354;gbkey=CDS;gene=cdd;locus_tag=HMPREF0889_1553;product=cytidine deaminase;protein_id=EFD94006.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 12834 13733 . + . ID=gene-HMPREF0889_1554;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=HMPREF0889_1554 GCA_000177555.1|ADGP01000019.1 Genbank CDS 12834 13733 . + 0 ID=cds-EFD94007.1;Parent=gene-HMPREF0889_1554;Dbxref=NCBI_GP:EFD94007.1;Name=EFD94007.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436;gbkey=CDS;gene=era;locus_tag=HMPREF0889_1554;product=ribosome biogenesis GTPase Era;protein_id=EFD94007.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 13746 15101 . + . ID=gene-HMPREF0889_1555;Name=HMPREF0889_1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1555 GCA_000177555.1|ADGP01000019.1 Genbank CDS 13746 15101 . + 0 ID=cds-EFD94008.1;Parent=gene-HMPREF0889_1555;Dbxref=NCBI_GP:EFD94008.1;Name=EFD94008.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF0889_1555;product=hypothetical protein;protein_id=EFD94008.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 15067 15783 . + . ID=gene-HMPREF0889_1556;Name=HMPREF0889_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1556 GCA_000177555.1|ADGP01000019.1 Genbank CDS 15067 15783 . + 0 ID=cds-EFD94009.1;Parent=gene-HMPREF0889_1556;Dbxref=NCBI_GP:EFD94009.1;Name=EFD94009.1;gbkey=CDS;locus_tag=HMPREF0889_1556;product=putative DNA repair protein RecO;protein_id=EFD94009.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 15959 16270 . + . ID=gene-HMPREF0889_1557;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HMPREF0889_1557 GCA_000177555.1|ADGP01000019.1 Genbank CDS 15959 16270 . + 0 ID=cds-EFD94010.1;Parent=gene-HMPREF0889_1557;Dbxref=NCBI_GP:EFD94010.1;Name=EFD94010.1;Note=identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;locus_tag=HMPREF0889_1557;product=ribosomal protein L21;protein_id=EFD94010.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 16270 16605 . + . ID=gene-HMPREF0889_1558;Name=HMPREF0889_1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1558 GCA_000177555.1|ADGP01000019.1 Genbank CDS 16270 16605 . + 0 ID=cds-EFD94011.1;Parent=gene-HMPREF0889_1558;Dbxref=NCBI_GP:EFD94011.1;Name=EFD94011.1;Note=identified by match to protein family HMM PF04327;gbkey=CDS;locus_tag=HMPREF0889_1558;product=hypothetical protein;protein_id=EFD94011.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 16598 16888 . + . ID=gene-HMPREF0889_1559;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1559 GCA_000177555.1|ADGP01000019.1 Genbank CDS 16598 16888 . + 0 ID=cds-EFD94012.1;Parent=gene-HMPREF0889_1559;Dbxref=NCBI_GP:EFD94012.1;Name=EFD94012.1;Note=identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062;gbkey=CDS;gene=rpmA;locus_tag=HMPREF0889_1559;product=ribosomal protein L27;protein_id=EFD94012.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 16957 17355 . + . ID=gene-HMPREF0889_1560;Name=HMPREF0889_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1560 GCA_000177555.1|ADGP01000019.1 Genbank CDS 16957 17355 . + 0 ID=cds-EFD94013.1;Parent=gene-HMPREF0889_1560;Dbxref=NCBI_GP:EFD94013.1;Name=EFD94013.1;gbkey=CDS;locus_tag=HMPREF0889_1560;product=hypothetical protein;protein_id=EFD94013.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 17453 18406 . - . ID=gene-HMPREF0889_1561;Name=HMPREF0889_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1561 GCA_000177555.1|ADGP01000019.1 Genbank CDS 17453 18406 . - 0 ID=cds-EFD94014.1;Parent=gene-HMPREF0889_1561;Dbxref=NCBI_GP:EFD94014.1;Name=EFD94014.1;Note=identified by match to protein family HMM PF01544;gbkey=CDS;locus_tag=HMPREF0889_1561;product=CorA-like protein;protein_id=EFD94014.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 18487 18600 . + . ID=gene-HMPREF0889_1562;Name=HMPREF0889_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1562 GCA_000177555.1|ADGP01000019.1 Genbank CDS 18487 18600 . + 0 ID=cds-EFD94015.1;Parent=gene-HMPREF0889_1562;Dbxref=NCBI_GP:EFD94015.1;Name=EFD94015.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1562;product=hypothetical protein;protein_id=EFD94015.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 18602 19384 . + . ID=gene-HMPREF0889_1563;Name=HMPREF0889_1563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1563 GCA_000177555.1|ADGP01000019.1 Genbank CDS 18602 19384 . + 0 ID=cds-EFD94016.1;Parent=gene-HMPREF0889_1563;Dbxref=NCBI_GP:EFD94016.1;Name=EFD94016.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF0889_1563;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EFD94016.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 19538 21025 . + . ID=gene-HMPREF0889_1564;Name=HMPREF0889_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1564 GCA_000177555.1|ADGP01000019.1 Genbank CDS 19538 21025 . + 0 ID=cds-EFD94017.1;Parent=gene-HMPREF0889_1564;Dbxref=NCBI_GP:EFD94017.1;Name=EFD94017.1;Note=identified by match to protein family HMM PF07656;gbkey=CDS;locus_tag=HMPREF0889_1564;product=hypothetical protein;protein_id=EFD94017.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 21248 21844 . + . ID=gene-HMPREF0889_1565;Name=HMPREF0889_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1565 GCA_000177555.1|ADGP01000019.1 Genbank CDS 21248 21844 . + 0 ID=cds-EFD94018.1;Parent=gene-HMPREF0889_1565;Dbxref=NCBI_GP:EFD94018.1;Name=EFD94018.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF0889_1565;product=transcriptional regulator%2C TetR family;protein_id=EFD94018.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 21828 22964 . + . ID=gene-HMPREF0889_1566;Name=HMPREF0889_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1566 GCA_000177555.1|ADGP01000019.1 Genbank CDS 21828 22964 . + 0 ID=cds-EFD94019.1;Parent=gene-HMPREF0889_1566;Dbxref=NCBI_GP:EFD94019.1;Name=EFD94019.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF0889_1566;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFD94019.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 22976 26110 . + . ID=gene-HMPREF0889_1567;Name=HMPREF0889_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1567 GCA_000177555.1|ADGP01000019.1 Genbank CDS 22976 26110 . + 0 ID=cds-EFD94020.1;Parent=gene-HMPREF0889_1567;Dbxref=NCBI_GP:EFD94020.1;Name=EFD94020.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915;gbkey=CDS;locus_tag=HMPREF0889_1567;product=RND transporter%2C HAE1 family;protein_id=EFD94020.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 26244 27581 . + . ID=gene-HMPREF0889_1568;Name=HMPREF0889_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1568 GCA_000177555.1|ADGP01000019.1 Genbank CDS 26244 27581 . + 0 ID=cds-EFD94021.1;Parent=gene-HMPREF0889_1568;Dbxref=NCBI_GP:EFD94021.1;Name=EFD94021.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF0889_1568;product=MATE efflux family protein;protein_id=EFD94021.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 27699 28697 . + . ID=gene-HMPREF0889_1569;Name=HMPREF0889_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1569 GCA_000177555.1|ADGP01000019.1 Genbank CDS 27699 28697 . + 0 ID=cds-EFD94022.1;Parent=gene-HMPREF0889_1569;Dbxref=NCBI_GP:EFD94022.1;Name=EFD94022.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1569;product=hypothetical protein;protein_id=EFD94022.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 28926 29057 . + . ID=gene-HMPREF0889_1570;Name=HMPREF0889_1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1570 GCA_000177555.1|ADGP01000019.1 Genbank CDS 28926 29057 . + 0 ID=cds-EFD94023.1;Parent=gene-HMPREF0889_1570;Dbxref=NCBI_GP:EFD94023.1;Name=EFD94023.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1570;product=hypothetical protein;protein_id=EFD94023.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 29085 30956 . + . ID=gene-HMPREF0889_1571;Name=HMPREF0889_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1571 GCA_000177555.1|ADGP01000019.1 Genbank CDS 29085 30956 . + 0 ID=cds-EFD94024.1;Parent=gene-HMPREF0889_1571;Dbxref=NCBI_GP:EFD94024.1;Name=EFD94024.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1571;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94024.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 31149 32612 . + . ID=gene-HMPREF0889_1572;Name=HMPREF0889_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1572 GCA_000177555.1|ADGP01000019.1 Genbank CDS 31149 32612 . + 0 ID=cds-EFD94025.1;Parent=gene-HMPREF0889_1572;Dbxref=NCBI_GP:EFD94025.1;Name=EFD94025.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;locus_tag=HMPREF0889_1572;product=hydrogenase%2C Fe-only;protein_id=EFD94025.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 32904 34262 . + . ID=gene-HMPREF0889_1573;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1573 GCA_000177555.1|ADGP01000019.1 Genbank CDS 32904 34262 . + 0 ID=cds-EFD94026.1;Parent=gene-HMPREF0889_1573;Dbxref=NCBI_GP:EFD94026.1;Name=EFD94026.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;gene=sucD;locus_tag=HMPREF0889_1573;product=aldehyde dehydrogenase (NAD) family protein;protein_id=EFD94026.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 34335 35447 . + . ID=gene-HMPREF0889_1574;Name=HMPREF0889_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1574 GCA_000177555.1|ADGP01000019.1 Genbank CDS 34335 35447 . + 0 ID=cds-EFD94027.1;Parent=gene-HMPREF0889_1574;Dbxref=NCBI_GP:EFD94027.1;Name=EFD94027.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF0889_1574;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EFD94027.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 35723 37351 . + . ID=gene-HMPREF0889_1575;Name=HMPREF0889_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1575 GCA_000177555.1|ADGP01000019.1 Genbank CDS 35723 37351 . + 0 ID=cds-EFD94028.1;Parent=gene-HMPREF0889_1575;Dbxref=NCBI_GP:EFD94028.1;Name=EFD94028.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694;gbkey=CDS;locus_tag=HMPREF0889_1575;product=LytS/YhcK-type transmembrane receptor domain protein;protein_id=EFD94028.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 37396 38163 . + . ID=gene-HMPREF0889_1576;Name=HMPREF0889_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1576 GCA_000177555.1|ADGP01000019.1 Genbank CDS 37396 38163 . + 0 ID=cds-EFD94029.1;Parent=gene-HMPREF0889_1576;Dbxref=NCBI_GP:EFD94029.1;Name=EFD94029.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;locus_tag=HMPREF0889_1576;product=LytTr DNA-binding domain protein;protein_id=EFD94029.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 38510 39808 . + . ID=gene-HMPREF0889_1577;Name=HMPREF0889_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1577 GCA_000177555.1|ADGP01000019.1 Genbank CDS 38510 39808 . + 0 ID=cds-EFD94030.1;Parent=gene-HMPREF0889_1577;Dbxref=NCBI_GP:EFD94030.1;Name=EFD94030.1;Note=identified by match to protein family HMM PF01637;gbkey=CDS;locus_tag=HMPREF0889_1577;product=hypothetical protein;protein_id=EFD94030.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 39845 40129 . + . ID=gene-HMPREF0889_1578;Name=HMPREF0889_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1578 GCA_000177555.1|ADGP01000019.1 Genbank CDS 39845 40129 . + 0 ID=cds-EFD94031.1;Parent=gene-HMPREF0889_1578;Dbxref=NCBI_GP:EFD94031.1;Name=EFD94031.1;gbkey=CDS;locus_tag=HMPREF0889_1578;product=hypothetical protein;protein_id=EFD94031.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 40320 41894 . + . ID=gene-HMPREF0889_1579;Name=HMPREF0889_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1579 GCA_000177555.1|ADGP01000019.1 Genbank CDS 40320 41894 . + 0 ID=cds-EFD94032.1;Parent=gene-HMPREF0889_1579;Dbxref=NCBI_GP:EFD94032.1;Name=EFD94032.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_1579;product=hypothetical protein;protein_id=EFD94032.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 41909 44242 . + . ID=gene-HMPREF0889_1580;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1580 GCA_000177555.1|ADGP01000019.1 Genbank CDS 41909 44242 . + 0 ID=cds-EFD94033.1;Parent=gene-HMPREF0889_1580;Dbxref=NCBI_GP:EFD94033.1;Name=EFD94033.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_1580;product=putative colicin I receptor;protein_id=EFD94033.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 44577 44867 . + . ID=gene-HMPREF0889_1581;Name=HMPREF0889_1581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1581 GCA_000177555.1|ADGP01000019.1 Genbank CDS 44577 44867 . + 0 ID=cds-EFD94034.1;Parent=gene-HMPREF0889_1581;Dbxref=NCBI_GP:EFD94034.1;Name=EFD94034.1;gbkey=CDS;locus_tag=HMPREF0889_1581;product=hypothetical protein;protein_id=EFD94034.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 44998 45264 . + . ID=gene-HMPREF0889_1582;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=HMPREF0889_1582 GCA_000177555.1|ADGP01000019.1 Genbank CDS 44998 45264 . + 0 ID=cds-EFD94035.1;Parent=gene-HMPREF0889_1582;Dbxref=NCBI_GP:EFD94035.1;Name=EFD94035.1;Note=identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952;gbkey=CDS;gene=rpsO;locus_tag=HMPREF0889_1582;product=ribosomal protein S15;protein_id=EFD94035.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 45414 47564 . + . ID=gene-HMPREF0889_1583;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=HMPREF0889_1583 GCA_000177555.1|ADGP01000019.1 Genbank CDS 45414 47564 . + 0 ID=cds-EFD94036.1;Parent=gene-HMPREF0889_1583;Dbxref=NCBI_GP:EFD94036.1;Name=EFD94036.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591;gbkey=CDS;gene=pnp;locus_tag=HMPREF0889_1583;product=polyribonucleotide nucleotidyltransferase;protein_id=EFD94036.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 47571 48017 . + . ID=gene-HMPREF0889_1584;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=HMPREF0889_1584 GCA_000177555.1|ADGP01000019.1 Genbank CDS 47571 48017 . + 0 ID=cds-EFD94037.1;Parent=gene-HMPREF0889_1584;Dbxref=NCBI_GP:EFD94037.1;Name=EFD94037.1;Note=identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576;gbkey=CDS;gene=dut;locus_tag=HMPREF0889_1584;product=dUTP diphosphatase;protein_id=EFD94037.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 48078 48626 . + . ID=gene-HMPREF0889_1585;Name=HMPREF0889_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1585 GCA_000177555.1|ADGP01000019.1 Genbank CDS 48078 48626 . + 0 ID=cds-EFD94038.1;Parent=gene-HMPREF0889_1585;Dbxref=NCBI_GP:EFD94038.1;Name=EFD94038.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF0889_1585;product=hydrolase%2C NUDIX family;protein_id=EFD94038.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 48646 49827 . + . ID=gene-HMPREF0889_1586;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1586 GCA_000177555.1|ADGP01000019.1 Genbank CDS 48646 49827 . + 0 ID=cds-EFD94039.1;Parent=gene-HMPREF0889_1586;Dbxref=NCBI_GP:EFD94039.1;Name=EFD94039.1;Note=identified by match to protein family HMM PF01676%3B match to protein family HMM PF08342%3B match to protein family HMM TIGR01696;gbkey=CDS;gene=deoB;locus_tag=HMPREF0889_1586;product=phosphopentomutase;protein_id=EFD94039.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 49837 51150 . + . ID=gene-HMPREF0889_1587;Name=pdp;gbkey=Gene;gene=pdp;gene_biotype=protein_coding;locus_tag=HMPREF0889_1587 GCA_000177555.1|ADGP01000019.1 Genbank CDS 49837 51150 . + 0 ID=cds-EFD94040.1;Parent=gene-HMPREF0889_1587;Dbxref=NCBI_GP:EFD94040.1;Name=EFD94040.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644;gbkey=CDS;gene=pdp;locus_tag=HMPREF0889_1587;product=pyrimidine-nucleoside phosphorylase;protein_id=EFD94040.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 51187 52569 . + . ID=gene-HMPREF0889_1588;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1588 GCA_000177555.1|ADGP01000019.1 Genbank CDS 51187 52569 . + 0 ID=cds-EFD94041.1;Parent=gene-HMPREF0889_1588;Dbxref=NCBI_GP:EFD94041.1;Name=EFD94041.1;Note=identified by match to protein family HMM PF01938%3B match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA;locus_tag=HMPREF0889_1588;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=EFD94041.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 52793 54271 . + . ID=gene-HMPREF0889_1589;Name=HMPREF0889_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1589 GCA_000177555.1|ADGP01000019.1 Genbank CDS 52793 54271 . + 0 ID=cds-EFD94042.1;Parent=gene-HMPREF0889_1589;Dbxref=NCBI_GP:EFD94042.1;Name=EFD94042.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_1589;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94042.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 54375 54665 . + . ID=gene-HMPREF0889_1590;Name=HMPREF0889_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1590 GCA_000177555.1|ADGP01000019.1 Genbank CDS 54375 54665 . + 0 ID=cds-EFD94043.1;Parent=gene-HMPREF0889_1590;Dbxref=NCBI_GP:EFD94043.1;Name=EFD94043.1;gbkey=CDS;locus_tag=HMPREF0889_1590;product=hypothetical protein;protein_id=EFD94043.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 56369 56848 . + . ID=gene-HMPREF0889_1591;Name=HMPREF0889_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1591 GCA_000177555.1|ADGP01000019.1 Genbank CDS 56369 56848 . + 0 ID=cds-EFD94044.1;Parent=gene-HMPREF0889_1591;Dbxref=NCBI_GP:EFD94044.1;Name=EFD94044.1;gbkey=CDS;locus_tag=HMPREF0889_1591;product=hypothetical protein;protein_id=EFD94044.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 57997 60351 . + . ID=gene-HMPREF0889_1592;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1592 GCA_000177555.1|ADGP01000019.1 Genbank CDS 57997 60351 . + 0 ID=cds-EFD94045.1;Parent=gene-HMPREF0889_1592;Dbxref=NCBI_GP:EFD94045.1;Name=EFD94045.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=cadA;locus_tag=HMPREF0889_1592;product=cadmium-exporting ATPase;protein_id=EFD94045.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 60449 60886 . + . ID=gene-HMPREF0889_1593;Name=HMPREF0889_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1593 GCA_000177555.1|ADGP01000019.1 Genbank CDS 60449 60886 . + 0 ID=cds-EFD94046.1;Parent=gene-HMPREF0889_1593;Dbxref=NCBI_GP:EFD94046.1;Name=EFD94046.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1593;product=hypothetical protein;protein_id=EFD94046.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 60897 61436 . + . ID=gene-HMPREF0889_1594;Name=HMPREF0889_1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1594 GCA_000177555.1|ADGP01000019.1 Genbank CDS 60897 61436 . + 0 ID=cds-EFD94047.1;Parent=gene-HMPREF0889_1594;Dbxref=NCBI_GP:EFD94047.1;Name=EFD94047.1;gbkey=CDS;locus_tag=HMPREF0889_1594;product=hypothetical protein;protein_id=EFD94047.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 61433 62977 . + . ID=gene-HMPREF0889_1595;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1595 GCA_000177555.1|ADGP01000019.1 Genbank CDS 61433 62977 . + 0 ID=cds-EFD94048.1;Parent=gene-HMPREF0889_1595;Dbxref=NCBI_GP:EFD94048.1;Name=EFD94048.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992;gbkey=CDS;gene=sdhA;locus_tag=HMPREF0889_1595;product=succinate dehydrogenase flavoprotein subunit;protein_id=EFD94048.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 62983 63684 . + . ID=gene-HMPREF0889_1596;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1596 GCA_000177555.1|ADGP01000019.1 Genbank CDS 62983 63684 . + 0 ID=cds-EFD94049.1;Parent=gene-HMPREF0889_1596;Dbxref=NCBI_GP:EFD94049.1;Name=EFD94049.1;Note=identified by match to protein family HMM TIGR00384;gbkey=CDS;gene=sdhB;locus_tag=HMPREF0889_1596;product=succinate dehydrogenase iron-sulfur subunit;protein_id=EFD94049.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 64159 64857 . + . ID=gene-HMPREF0889_1597;Name=HMPREF0889_1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1597 GCA_000177555.1|ADGP01000019.1 Genbank CDS 64159 64857 . + 0 ID=cds-EFD94050.1;Parent=gene-HMPREF0889_1597;Dbxref=NCBI_GP:EFD94050.1;Name=EFD94050.1;gbkey=CDS;locus_tag=HMPREF0889_1597;product=hypothetical protein;protein_id=EFD94050.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 64868 65788 . + . ID=gene-HMPREF0889_1598;Name=HMPREF0889_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1598 GCA_000177555.1|ADGP01000019.1 Genbank CDS 64868 65788 . + 0 ID=cds-EFD94051.1;Parent=gene-HMPREF0889_1598;Dbxref=NCBI_GP:EFD94051.1;Name=EFD94051.1;gbkey=CDS;locus_tag=HMPREF0889_1598;product=hypothetical protein;protein_id=EFD94051.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 66271 66486 . + . ID=gene-HMPREF0889_1599;Name=HMPREF0889_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1599 GCA_000177555.1|ADGP01000019.1 Genbank CDS 66271 66486 . + 0 ID=cds-EFD94052.1;Parent=gene-HMPREF0889_1599;Dbxref=NCBI_GP:EFD94052.1;Name=EFD94052.1;gbkey=CDS;locus_tag=HMPREF0889_1599;product=hypothetical protein;protein_id=EFD94052.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 66526 68625 . + . ID=gene-HMPREF0889_1600;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=HMPREF0889_1600 GCA_000177555.1|ADGP01000019.1 Genbank CDS 66526 68625 . + 0 ID=cds-EFD94053.1;Parent=gene-HMPREF0889_1600;Dbxref=NCBI_GP:EFD94053.1;Name=EFD94053.1;Note=identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675;gbkey=CDS;gene=dcm;locus_tag=HMPREF0889_1600;product=DNA (cytosine-5-)-methyltransferase;protein_id=EFD94053.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 68618 69490 . + . ID=gene-HMPREF0889_1601;Name=HMPREF0889_1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1601 GCA_000177555.1|ADGP01000019.1 Genbank CDS 68618 69490 . + 0 ID=cds-EFD94054.1;Parent=gene-HMPREF0889_1601;Dbxref=NCBI_GP:EFD94054.1;Name=EFD94054.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1601;product=hypothetical protein;protein_id=EFD94054.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 69843 69983 . + . ID=gene-HMPREF0889_1602;Name=HMPREF0889_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1602 GCA_000177555.1|ADGP01000019.1 Genbank CDS 69843 69983 . + 0 ID=cds-EFD94055.1;Parent=gene-HMPREF0889_1602;Dbxref=NCBI_GP:EFD94055.1;Name=EFD94055.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1602;product=hypothetical protein;protein_id=EFD94055.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 70020 72608 . + . ID=gene-HMPREF0889_1603;Name=HMPREF0889_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1603 GCA_000177555.1|ADGP01000019.1 Genbank CDS 70020 72608 . + 0 ID=cds-EFD94056.1;Parent=gene-HMPREF0889_1603;Dbxref=NCBI_GP:EFD94056.1;Name=EFD94056.1;gbkey=CDS;locus_tag=HMPREF0889_1603;product=hypothetical protein;protein_id=EFD94056.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 72611 73942 . - . ID=gene-HMPREF0889_1604;Name=HMPREF0889_1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1604 GCA_000177555.1|ADGP01000019.1 Genbank CDS 72611 73942 . - 0 ID=cds-EFD94057.1;Parent=gene-HMPREF0889_1604;Dbxref=NCBI_GP:EFD94057.1;Name=EFD94057.1;Note=identified by match to protein family HMM PF03432;gbkey=CDS;locus_tag=HMPREF0889_1604;product=relaxase/mobilization nuclease domain protein;protein_id=EFD94057.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 74688 75260 . + . ID=gene-HMPREF0889_1605;Name=HMPREF0889_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1605 GCA_000177555.1|ADGP01000019.1 Genbank CDS 74688 75260 . + 0 ID=cds-EFD94058.1;Parent=gene-HMPREF0889_1605;Dbxref=NCBI_GP:EFD94058.1;Name=EFD94058.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF0889_1605;product=transcriptional regulator%2C TetR family;protein_id=EFD94058.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 75364 77103 . + . ID=gene-HMPREF0889_1606;Name=HMPREF0889_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1606 GCA_000177555.1|ADGP01000019.1 Genbank CDS 75364 77103 . + 0 ID=cds-EFD94059.1;Parent=gene-HMPREF0889_1606;Dbxref=NCBI_GP:EFD94059.1;Name=EFD94059.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF0889_1606;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94059.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 77096 78811 . + . ID=gene-HMPREF0889_1607;Name=HMPREF0889_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1607 GCA_000177555.1|ADGP01000019.1 Genbank CDS 77096 78811 . + 0 ID=cds-EFD94060.1;Parent=gene-HMPREF0889_1607;Dbxref=NCBI_GP:EFD94060.1;Name=EFD94060.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF0889_1607;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94060.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 79087 80358 . + . ID=gene-HMPREF0889_1608;Name=HMPREF0889_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1608 GCA_000177555.1|ADGP01000019.1 Genbank CDS 79087 80358 . + 0 ID=cds-EFD94061.1;Parent=gene-HMPREF0889_1608;Dbxref=NCBI_GP:EFD94061.1;Name=EFD94061.1;gbkey=CDS;locus_tag=HMPREF0889_1608;product=hypothetical protein;protein_id=EFD94061.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 80402 80605 . + . ID=gene-HMPREF0889_1609;Name=HMPREF0889_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1609 GCA_000177555.1|ADGP01000019.1 Genbank CDS 80402 80605 . + 0 ID=cds-EFD94062.1;Parent=gene-HMPREF0889_1609;Dbxref=NCBI_GP:EFD94062.1;Name=EFD94062.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_1609;product=hypothetical protein;protein_id=EFD94062.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 81238 82083 . + . ID=gene-HMPREF0889_1610;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1610 GCA_000177555.1|ADGP01000019.1 Genbank CDS 81238 82083 . + 0 ID=cds-EFD94063.1;Parent=gene-HMPREF0889_1610;Dbxref=NCBI_GP:EFD94063.1;Name=EFD94063.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136;gbkey=CDS;gene=pstS;locus_tag=HMPREF0889_1610;product=phosphate binding protein;protein_id=EFD94063.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 82148 83014 . + . ID=gene-HMPREF0889_1611;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1611 GCA_000177555.1|ADGP01000019.1 Genbank CDS 82148 83014 . + 0 ID=cds-EFD94064.1;Parent=gene-HMPREF0889_1611;Dbxref=NCBI_GP:EFD94064.1;Name=EFD94064.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138;gbkey=CDS;gene=pstC;locus_tag=HMPREF0889_1611;product=phosphate ABC transporter%2C permease protein PstC;protein_id=EFD94064.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 83018 83878 . + . ID=gene-HMPREF0889_1612;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1612 GCA_000177555.1|ADGP01000019.1 Genbank CDS 83018 83878 . + 0 ID=cds-EFD94065.1;Parent=gene-HMPREF0889_1612;Dbxref=NCBI_GP:EFD94065.1;Name=EFD94065.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974;gbkey=CDS;gene=pstA;locus_tag=HMPREF0889_1612;product=phosphate ABC transporter%2C permease protein PstA;protein_id=EFD94065.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 83879 84655 . + . ID=gene-HMPREF0889_1613;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1613 GCA_000177555.1|ADGP01000019.1 Genbank CDS 83879 84655 . + 0 ID=cds-EFD94066.1;Parent=gene-HMPREF0889_1613;Dbxref=NCBI_GP:EFD94066.1;Name=EFD94066.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;gene=pstB;locus_tag=HMPREF0889_1613;product=phosphate ABC transporter%2C ATP-binding protein;protein_id=EFD94066.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 84655 85326 . + . ID=gene-HMPREF0889_1614;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=HMPREF0889_1614 GCA_000177555.1|ADGP01000019.1 Genbank CDS 84655 85326 . + 0 ID=cds-EFD94067.1;Parent=gene-HMPREF0889_1614;Dbxref=NCBI_GP:EFD94067.1;Name=EFD94067.1;Note=identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135;gbkey=CDS;gene=phoU;locus_tag=HMPREF0889_1614;product=phosphate transport system regulatory protein PhoU;protein_id=EFD94067.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 85301 85981 . + . ID=gene-HMPREF0889_1615;Name=HMPREF0889_1615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1615 GCA_000177555.1|ADGP01000019.1 Genbank CDS 85301 85981 . + 0 ID=cds-EFD94068.1;Parent=gene-HMPREF0889_1615;Dbxref=NCBI_GP:EFD94068.1;Name=EFD94068.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF0889_1615;product=response regulator receiver domain protein;protein_id=EFD94068.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 85971 87635 . + . ID=gene-HMPREF0889_1616;Name=HMPREF0889_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1616 GCA_000177555.1|ADGP01000019.1 Genbank CDS 85971 87635 . + 0 ID=cds-EFD94069.1;Parent=gene-HMPREF0889_1616;Dbxref=NCBI_GP:EFD94069.1;Name=EFD94069.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF0889_1616;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EFD94069.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 87912 88097 . + . ID=gene-HMPREF0889_1617;Name=HMPREF0889_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1617 GCA_000177555.1|ADGP01000019.1 Genbank CDS 87912 88097 . + 0 ID=cds-EFD94070.1;Parent=gene-HMPREF0889_1617;Dbxref=NCBI_GP:EFD94070.1;Name=EFD94070.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1617;product=hypothetical protein;protein_id=EFD94070.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 88505 89899 . - . ID=gene-HMPREF0889_1618;Name=HMPREF0889_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1618 GCA_000177555.1|ADGP01000019.1 Genbank CDS 88505 89899 . - 0 ID=cds-EFD94071.1;Parent=gene-HMPREF0889_1618;Dbxref=NCBI_GP:EFD94071.1;Name=EFD94071.1;Note=identified by match to protein family HMM PF00860;gbkey=CDS;locus_tag=HMPREF0889_1618;product=putative permease;protein_id=EFD94071.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 90128 91018 . + . ID=gene-HMPREF0889_1619;Name=HMPREF0889_1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1619 GCA_000177555.1|ADGP01000019.1 Genbank CDS 90128 91018 . + 0 ID=cds-EFD94072.1;Parent=gene-HMPREF0889_1619;Dbxref=NCBI_GP:EFD94072.1;Name=EFD94072.1;Note=identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255;gbkey=CDS;locus_tag=HMPREF0889_1619;product=TIGR00255-like family protein;protein_id=EFD94072.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 91028 91312 . + . ID=gene-HMPREF0889_1620;Name=HMPREF0889_1620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1620 GCA_000177555.1|ADGP01000019.1 Genbank CDS 91028 91312 . + 0 ID=cds-EFD94073.1;Parent=gene-HMPREF0889_1620;Dbxref=NCBI_GP:EFD94073.1;Name=EFD94073.1;Note=identified by match to protein family HMM PF04025;gbkey=CDS;locus_tag=HMPREF0889_1620;product=hypothetical protein;protein_id=EFD94073.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 91315 91932 . + . ID=gene-HMPREF0889_1621;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=HMPREF0889_1621 GCA_000177555.1|ADGP01000019.1 Genbank CDS 91315 91932 . + 0 ID=cds-EFD94074.1;Parent=gene-HMPREF0889_1621;Dbxref=NCBI_GP:EFD94074.1;Name=EFD94074.1;Note=identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263;gbkey=CDS;gene=gmk;locus_tag=HMPREF0889_1621;product=guanylate kinase;protein_id=EFD94074.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 91950 92159 . + . ID=gene-HMPREF0889_1622;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1622 GCA_000177555.1|ADGP01000019.1 Genbank CDS 91950 92159 . + 0 ID=cds-EFD94075.1;Parent=gene-HMPREF0889_1622;Dbxref=NCBI_GP:EFD94075.1;Name=EFD94075.1;Note=identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690;gbkey=CDS;gene=rpoZ;locus_tag=HMPREF0889_1622;product=DNA-directed RNA polymerase%2C omega subunit;protein_id=EFD94075.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 92177 93406 . + . ID=gene-HMPREF0889_1623;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1623 GCA_000177555.1|ADGP01000019.1 Genbank CDS 92177 93406 . + 0 ID=cds-EFD94076.1;Parent=gene-HMPREF0889_1623;Dbxref=NCBI_GP:EFD94076.1;Name=EFD94076.1;Note=identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521;gbkey=CDS;gene=coaBC;locus_tag=HMPREF0889_1623;product=phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase;protein_id=EFD94076.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank binding_site 93463 93564 . + . ID=id-ADGP01000019.1:93463..93564;Note=SAM riboswitch (S box leader)%3B Rfam score 66.51;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162 GCA_000177555.1|ADGP01000019.1 Genbank gene 93617 94810 . + . ID=gene-HMPREF0889_1625;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=HMPREF0889_1625 GCA_000177555.1|ADGP01000019.1 Genbank CDS 93617 94810 . + 0 ID=cds-EFD94077.1;Parent=gene-HMPREF0889_1625;Dbxref=NCBI_GP:EFD94077.1;Name=EFD94077.1;Note=identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034;gbkey=CDS;gene=metK;locus_tag=HMPREF0889_1625;product=methionine adenosyltransferase;protein_id=EFD94077.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 94921 97281 . + . ID=gene-HMPREF0889_1626;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1626 GCA_000177555.1|ADGP01000019.1 Genbank CDS 94921 97281 . + 0 ID=cds-EFD94078.1;Parent=gene-HMPREF0889_1626;Dbxref=NCBI_GP:EFD94078.1;Name=EFD94078.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595;gbkey=CDS;gene=priA;locus_tag=HMPREF0889_1626;product=primosomal protein N';protein_id=EFD94078.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 97307 97822 . + . ID=gene-HMPREF0889_1627;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=HMPREF0889_1627 GCA_000177555.1|ADGP01000019.1 Genbank CDS 97307 97822 . + 0 ID=cds-EFD94079.1;Parent=gene-HMPREF0889_1627;Dbxref=NCBI_GP:EFD94079.1;Name=EFD94079.1;Note=identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079;gbkey=CDS;gene=def;locus_tag=HMPREF0889_1627;product=peptide deformylase;protein_id=EFD94079.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 97819 98757 . + . ID=gene-HMPREF0889_1628;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HMPREF0889_1628 GCA_000177555.1|ADGP01000019.1 Genbank CDS 97819 98757 . + 0 ID=cds-EFD94080.1;Parent=gene-HMPREF0889_1628;Dbxref=NCBI_GP:EFD94080.1;Name=EFD94080.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;locus_tag=HMPREF0889_1628;product=methionyl-tRNA formyltransferase;protein_id=EFD94080.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 98832 100160 . + . ID=gene-HMPREF0889_1629;Name=sun;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=HMPREF0889_1629 GCA_000177555.1|ADGP01000019.1 Genbank CDS 98832 100160 . + 0 ID=cds-EFD94081.1;Parent=gene-HMPREF0889_1629;Dbxref=NCBI_GP:EFD94081.1;Name=EFD94081.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563;gbkey=CDS;gene=sun;locus_tag=HMPREF0889_1629;product=ribosomal RNA small subunit methyltransferase B;protein_id=EFD94081.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 100162 101199 . + . ID=gene-HMPREF0889_1630;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=HMPREF0889_1630 GCA_000177555.1|ADGP01000019.1 Genbank CDS 100162 101199 . + 0 ID=cds-EFD94082.1;Parent=gene-HMPREF0889_1630;Dbxref=NCBI_GP:EFD94082.1;Name=EFD94082.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048;gbkey=CDS;gene=rlmN;locus_tag=HMPREF0889_1630;product=23S rRNA m2A2503 methyltransferase;protein_id=EFD94082.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 101257 101967 . + . ID=gene-HMPREF0889_1631;Name=HMPREF0889_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1631 GCA_000177555.1|ADGP01000019.1 Genbank CDS 101257 101967 . + 0 ID=cds-EFD94083.1;Parent=gene-HMPREF0889_1631;Dbxref=NCBI_GP:EFD94083.1;Name=EFD94083.1;Note=identified by match to protein family HMM PF00481;gbkey=CDS;locus_tag=HMPREF0889_1631;product=protein phosphatase 2C;protein_id=EFD94083.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 101975 103918 . + . ID=gene-HMPREF0889_1632;Name=HMPREF0889_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1632 GCA_000177555.1|ADGP01000019.1 Genbank CDS 101975 103918 . + 0 ID=cds-EFD94084.1;Parent=gene-HMPREF0889_1632;Dbxref=NCBI_GP:EFD94084.1;Name=EFD94084.1;Note=identified by match to protein family HMM PF00069%3B match to protein family HMM PF03793%3B match to protein family HMM PF07714;gbkey=CDS;locus_tag=HMPREF0889_1632;product=kinase domain protein;protein_id=EFD94084.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 103938 104795 . + . ID=gene-HMPREF0889_1633;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1633 GCA_000177555.1|ADGP01000019.1 Genbank CDS 103938 104795 . + 0 ID=cds-EFD94085.1;Parent=gene-HMPREF0889_1633;Dbxref=NCBI_GP:EFD94085.1;Name=EFD94085.1;Note=identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157;gbkey=CDS;gene=rsgA;locus_tag=HMPREF0889_1633;product=ribosome small subunit-dependent GTPase A;protein_id=EFD94085.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 104797 105444 . + . ID=gene-HMPREF0889_1634;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=HMPREF0889_1634 GCA_000177555.1|ADGP01000019.1 Genbank CDS 104797 105444 . + 0 ID=cds-EFD94086.1;Parent=gene-HMPREF0889_1634;Dbxref=NCBI_GP:EFD94086.1;Name=EFD94086.1;Note=identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;locus_tag=HMPREF0889_1634;product=ribulose-phosphate 3-epimerase;protein_id=EFD94086.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank binding_site 105516 105649 . + . ID=id-ADGP01000019.1:105516..105649;Note=FMN riboswitch (RFN element)%3B Rfam score 60.34;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050 GCA_000177555.1|ADGP01000019.1 Genbank gene 105738 106874 . + . ID=gene-HMPREF0889_1636;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1636 GCA_000177555.1|ADGP01000019.1 Genbank CDS 105738 106874 . + 0 ID=cds-EFD94087.1;Parent=gene-HMPREF0889_1636;Dbxref=NCBI_GP:EFD94087.1;Name=EFD94087.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326;gbkey=CDS;gene=ribD;locus_tag=HMPREF0889_1636;product=riboflavin biosynthesis protein RibD;protein_id=EFD94087.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 106855 107505 . + . ID=gene-HMPREF0889_1637;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1637 GCA_000177555.1|ADGP01000019.1 Genbank CDS 106855 107505 . + 0 ID=cds-EFD94088.1;Parent=gene-HMPREF0889_1637;Dbxref=NCBI_GP:EFD94088.1;Name=EFD94088.1;Note=identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187;gbkey=CDS;gene=ribE;locus_tag=HMPREF0889_1637;product=riboflavin synthase%2C alpha subunit;protein_id=EFD94088.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 107533 107997 . + . ID=gene-HMPREF0889_1638;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1638 GCA_000177555.1|ADGP01000019.1 Genbank CDS 107533 107997 . + 0 ID=cds-EFD94089.1;Parent=gene-HMPREF0889_1638;Dbxref=NCBI_GP:EFD94089.1;Name=EFD94089.1;Note=identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114;gbkey=CDS;gene=ribH;locus_tag=HMPREF0889_1638;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=EFD94089.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 108168 108281 . + . ID=gene-HMPREF0889_1639;Name=HMPREF0889_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1639 GCA_000177555.1|ADGP01000019.1 Genbank CDS 108168 108281 . + 0 ID=cds-EFD94090.1;Parent=gene-HMPREF0889_1639;Dbxref=NCBI_GP:EFD94090.1;Name=EFD94090.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1639;product=hypothetical protein;protein_id=EFD94090.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 108296 109159 . + . ID=gene-HMPREF0889_1640;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1640 GCA_000177555.1|ADGP01000019.1 Genbank CDS 108296 109159 . + 0 ID=cds-EFD94091.1;Parent=gene-HMPREF0889_1640;Dbxref=NCBI_GP:EFD94091.1;Name=EFD94091.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596;gbkey=CDS;gene=ylqF;locus_tag=HMPREF0889_1640;product=ribosome biogenesis GTP-binding protein YlqF;protein_id=EFD94091.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 109156 109950 . + . ID=gene-HMPREF0889_1641;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1641 GCA_000177555.1|ADGP01000019.1 Genbank CDS 109156 109950 . + 0 ID=cds-EFD94092.1;Parent=gene-HMPREF0889_1641;Dbxref=NCBI_GP:EFD94092.1;Name=EFD94092.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=HMPREF0889_1641;product=ribonuclease HII;protein_id=EFD94092.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 109961 110416 . + . ID=gene-HMPREF0889_1642;Name=HMPREF0889_1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1642 GCA_000177555.1|ADGP01000019.1 Genbank CDS 109961 110416 . + 0 ID=cds-EFD94093.1;Parent=gene-HMPREF0889_1642;Dbxref=NCBI_GP:EFD94093.1;Name=EFD94093.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_1642;product=hypothetical protein;protein_id=EFD94093.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 110413 111147 . + . ID=gene-HMPREF0889_1643;Name=HMPREF0889_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1643 GCA_000177555.1|ADGP01000019.1 Genbank CDS 110413 111147 . + 0 ID=cds-EFD94094.1;Parent=gene-HMPREF0889_1643;Dbxref=NCBI_GP:EFD94094.1;Name=EFD94094.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF0889_1643;product=amidohydrolase;protein_id=EFD94094.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 111357 113255 . - . ID=gene-HMPREF0889_1644;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1644 GCA_000177555.1|ADGP01000019.1 Genbank CDS 111357 113255 . - 0 ID=cds-EFD94095.1;Parent=gene-HMPREF0889_1644;Dbxref=NCBI_GP:EFD94095.1;Name=EFD94095.1;Note=identified by match to protein family HMM PF02540%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00552;gbkey=CDS;gene=nadE;locus_tag=HMPREF0889_1644;product=NAD+ synthase;protein_id=EFD94095.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 113367 113930 . - . ID=gene-HMPREF0889_1645;Name=HMPREF0889_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1645 GCA_000177555.1|ADGP01000019.1 Genbank CDS 113367 113930 . - 0 ID=cds-EFD94096.1;Parent=gene-HMPREF0889_1645;Dbxref=NCBI_GP:EFD94096.1;Name=EFD94096.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=HMPREF0889_1645;product=flavin reductase;protein_id=EFD94096.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 114150 114605 . + . ID=gene-HMPREF0889_1646;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=HMPREF0889_1646 GCA_000177555.1|ADGP01000019.1 Genbank CDS 114150 114605 . + 0 ID=cds-EFD94097.1;Parent=gene-HMPREF0889_1646;Dbxref=NCBI_GP:EFD94097.1;Name=EFD94097.1;gbkey=CDS;gene=ctsR;locus_tag=HMPREF0889_1646;product=transcriptional repressor of CtsR;protein_id=EFD94097.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 114621 115070 . + . ID=gene-HMPREF0889_1647;Name=HMPREF0889_1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1647 GCA_000177555.1|ADGP01000019.1 Genbank CDS 114621 115070 . + 0 ID=cds-EFD94098.1;Parent=gene-HMPREF0889_1647;Dbxref=NCBI_GP:EFD94098.1;Name=EFD94098.1;gbkey=CDS;locus_tag=HMPREF0889_1647;product=hypothetical protein;protein_id=EFD94098.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 115080 116126 . + . ID=gene-HMPREF0889_1648;Name=HMPREF0889_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1648 GCA_000177555.1|ADGP01000019.1 Genbank CDS 115080 116126 . + 0 ID=cds-EFD94099.1;Parent=gene-HMPREF0889_1648;Dbxref=NCBI_GP:EFD94099.1;Name=EFD94099.1;Note=identified by match to protein family HMM PF00217;gbkey=CDS;locus_tag=HMPREF0889_1648;product=ATP:guanido phosphotransferase%2C C-terminal catalytic domain protein;protein_id=EFD94099.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 116113 117504 . + . ID=gene-HMPREF0889_1649;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1649 GCA_000177555.1|ADGP01000019.1 Genbank CDS 116113 117504 . + 0 ID=cds-EFD94100.1;Parent=gene-HMPREF0889_1649;Dbxref=NCBI_GP:EFD94100.1;Name=EFD94100.1;Note=identified by match to protein family HMM TIGR00416;gbkey=CDS;gene=radA;locus_tag=HMPREF0889_1649;product=DNA repair protein RadA;protein_id=EFD94100.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 117596 118780 . + . ID=gene-HMPREF0889_1650;Name=HMPREF0889_1650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1650 GCA_000177555.1|ADGP01000019.1 Genbank CDS 117596 118780 . + 0 ID=cds-EFD94101.1;Parent=gene-HMPREF0889_1650;Dbxref=NCBI_GP:EFD94101.1;Name=EFD94101.1;Note=identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938;gbkey=CDS;locus_tag=HMPREF0889_1650;product=PIN domain protein;protein_id=EFD94101.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 118788 119969 . + . ID=gene-HMPREF0889_1651;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1651 GCA_000177555.1|ADGP01000019.1 Genbank CDS 118788 119969 . + 0 ID=cds-EFD94102.1;Parent=gene-HMPREF0889_1651;Dbxref=NCBI_GP:EFD94102.1;Name=EFD94102.1;Note=identified by match to protein family HMM PF01128%3B match to protein family HMM PF02542%3B match to protein family HMM TIGR00151%3B match to protein family HMM TIGR00453;gbkey=CDS;gene=ispF;locus_tag=HMPREF0889_1651;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=EFD94102.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 119992 121449 . + . ID=gene-HMPREF0889_1652;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HMPREF0889_1652 GCA_000177555.1|ADGP01000019.1 Genbank CDS 119992 121449 . + 0 ID=cds-EFD94103.1;Parent=gene-HMPREF0889_1652;Dbxref=NCBI_GP:EFD94103.1;Name=EFD94103.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464;gbkey=CDS;gene=gltX;locus_tag=HMPREF0889_1652;product=glutamate--tRNA ligase;protein_id=EFD94103.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank sequence_feature 121510 121717 . + . ID=id-ADGP01000019.1:121510..121717;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000019.1 Genbank gene 121764 123209 . + . ID=gene-HMPREF0889_1654;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1654 GCA_000177555.1|ADGP01000019.1 Genbank CDS 121764 123209 . + 0 ID=cds-EFD94104.1;Parent=gene-HMPREF0889_1654;Dbxref=NCBI_GP:EFD94104.1;Name=EFD94104.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;locus_tag=HMPREF0889_1654;product=cysteine--tRNA ligase;protein_id=EFD94104.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 123206 123682 . + . ID=gene-HMPREF0889_1655;Name=HMPREF0889_1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1655 GCA_000177555.1|ADGP01000019.1 Genbank CDS 123206 123682 . + 0 ID=cds-EFD94105.1;Parent=gene-HMPREF0889_1655;Dbxref=NCBI_GP:EFD94105.1;Name=EFD94105.1;Note=identified by match to protein family HMM PF00636;gbkey=CDS;locus_tag=HMPREF0889_1655;product=RNase3 domain protein;protein_id=EFD94105.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 123691 124443 . + . ID=gene-HMPREF0889_1656;Name=HMPREF0889_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1656 GCA_000177555.1|ADGP01000019.1 Genbank CDS 123691 124443 . + 0 ID=cds-EFD94106.1;Parent=gene-HMPREF0889_1656;Dbxref=NCBI_GP:EFD94106.1;Name=EFD94106.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;locus_tag=HMPREF0889_1656;product=RNA methyltransferase%2C TrmH family%2C group 3;protein_id=EFD94106.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 124440 124979 . + . ID=gene-HMPREF0889_1657;Name=HMPREF0889_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1657 GCA_000177555.1|ADGP01000019.1 Genbank CDS 124440 124979 . + 0 ID=cds-EFD94107.1;Parent=gene-HMPREF0889_1657;Dbxref=NCBI_GP:EFD94107.1;Name=EFD94107.1;Note=identified by match to protein family HMM PF05991;gbkey=CDS;locus_tag=HMPREF0889_1657;product=hypothetical protein;protein_id=EFD94107.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 124986 125675 . + . ID=gene-HMPREF0889_1658;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1658 GCA_000177555.1|ADGP01000019.1 Genbank CDS 124986 125675 . + 0 ID=cds-EFD94108.1;Parent=gene-HMPREF0889_1658;Dbxref=NCBI_GP:EFD94108.1;Name=EFD94108.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02859%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=sigH;locus_tag=HMPREF0889_1658;product=RNA polymerase sigma-H factor;protein_id=EFD94108.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 125720 125956 . + . ID=gene-HMPREF0889_1659;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1659 GCA_000177555.1|ADGP01000019.1 Genbank CDS 125720 125956 . + 0 ID=cds-EFD94109.1;Parent=gene-HMPREF0889_1659;Dbxref=NCBI_GP:EFD94109.1;Name=EFD94109.1;Note=identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810;gbkey=CDS;gene=secG;locus_tag=HMPREF0889_1659;product=preprotein translocase%2C SecG subunit;protein_id=EFD94109.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 126009 128312 . + . ID=gene-HMPREF0889_1660;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=HMPREF0889_1660 GCA_000177555.1|ADGP01000019.1 Genbank CDS 126009 128312 . + 0 ID=cds-EFD94110.1;Parent=gene-HMPREF0889_1660;Dbxref=NCBI_GP:EFD94110.1;Name=EFD94110.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063;gbkey=CDS;gene=rnr;locus_tag=HMPREF0889_1660;product=ribonuclease R;protein_id=EFD94110.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 128325 128795 . + . ID=gene-HMPREF0889_1661;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1661 GCA_000177555.1|ADGP01000019.1 Genbank CDS 128325 128795 . + 0 ID=cds-EFD94111.1;Parent=gene-HMPREF0889_1661;Dbxref=NCBI_GP:EFD94111.1;Name=EFD94111.1;Note=identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086;gbkey=CDS;gene=smpB;locus_tag=HMPREF0889_1661;product=SsrA-binding protein;protein_id=EFD94111.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 128806 129153 . + . ID=gene-HMPREF0889_1662;Name=HMPREF0889_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1662 GCA_000177555.1|ADGP01000019.1 Genbank CDS 128806 129153 . + 0 ID=cds-EFD94112.1;Parent=gene-HMPREF0889_1662;Dbxref=NCBI_GP:EFD94112.1;Name=EFD94112.1;Note=identified by match to protein family HMM PF03960;gbkey=CDS;locus_tag=HMPREF0889_1662;product=ArsC family protein;protein_id=EFD94112.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 129241 129426 . + . ID=gene-HMPREF0889_1663;Name=HMPREF0889_1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1663 GCA_000177555.1|ADGP01000019.1 Genbank CDS 129241 129426 . + 0 ID=cds-EFD94113.1;Parent=gene-HMPREF0889_1663;Dbxref=NCBI_GP:EFD94113.1;Name=EFD94113.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1663;product=hypothetical protein;protein_id=EFD94113.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 129410 130294 . + . ID=gene-HMPREF0889_1664;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=HMPREF0889_1664 GCA_000177555.1|ADGP01000019.1 Genbank CDS 129410 130294 . + 0 ID=cds-EFD94114.1;Parent=gene-HMPREF0889_1664;Dbxref=NCBI_GP:EFD94114.1;Name=EFD94114.1;Note=identified by match to protein family HMM PF01430;gbkey=CDS;gene=hslO;locus_tag=HMPREF0889_1664;product=chaperonin HslO;protein_id=EFD94114.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 130297 131091 . + . ID=gene-HMPREF0889_1665;Name=mtnP;gbkey=Gene;gene=mtnP;gene_biotype=protein_coding;locus_tag=HMPREF0889_1665 GCA_000177555.1|ADGP01000019.1 Genbank CDS 130297 131091 . + 0 ID=cds-EFD94115.1;Parent=gene-HMPREF0889_1665;Dbxref=NCBI_GP:EFD94115.1;Name=EFD94115.1;Note=identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01694;gbkey=CDS;gene=mtnP;locus_tag=HMPREF0889_1665;product=methylthioadenosine phosphorylase;protein_id=EFD94115.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 131095 132156 . + . ID=gene-HMPREF0889_1666;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1666 GCA_000177555.1|ADGP01000019.1 Genbank CDS 131095 132156 . + 0 ID=cds-EFD94116.1;Parent=gene-HMPREF0889_1666;Dbxref=NCBI_GP:EFD94116.1;Name=EFD94116.1;Note=identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524;gbkey=CDS;gene=mtnA;locus_tag=HMPREF0889_1666;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=EFD94116.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 132177 133418 . + . ID=gene-HMPREF0889_1667;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=HMPREF0889_1667 GCA_000177555.1|ADGP01000019.1 Genbank CDS 132177 133418 . + 0 ID=cds-EFD94117.1;Parent=gene-HMPREF0889_1667;Dbxref=NCBI_GP:EFD94117.1;Name=EFD94117.1;Note=identified by match to protein family HMM PF00670%3B match to protein family HMM PF05221%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00936;gbkey=CDS;gene=ahcY;locus_tag=HMPREF0889_1667;product=adenosylhomocysteinase;protein_id=EFD94117.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 133435 134718 . + . ID=gene-HMPREF0889_1668;Name=HMPREF0889_1668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1668 GCA_000177555.1|ADGP01000019.1 Genbank CDS 133435 134718 . + 0 ID=cds-EFD94118.1;Parent=gene-HMPREF0889_1668;Dbxref=NCBI_GP:EFD94118.1;Name=EFD94118.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF0889_1668;product=amidohydrolase family protein;protein_id=EFD94118.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 134889 135506 . - . ID=gene-HMPREF0889_1669;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1669 GCA_000177555.1|ADGP01000019.1 Genbank CDS 134889 135506 . - 0 ID=cds-EFD94119.1;Parent=gene-HMPREF0889_1669;Dbxref=NCBI_GP:EFD94119.1;Name=EFD94119.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498;gbkey=CDS;gene=lexA;locus_tag=HMPREF0889_1669;product=repressor LexA;protein_id=EFD94119.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 135676 136035 . + . ID=gene-HMPREF0889_1670;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=HMPREF0889_1670 GCA_000177555.1|ADGP01000019.1 Genbank CDS 135676 136035 . + 0 ID=cds-EFD94120.1;Parent=gene-HMPREF0889_1670;Dbxref=NCBI_GP:EFD94120.1;Name=EFD94120.1;Note=identified by match to protein family HMM PF01476;gbkey=CDS;gene=lysM;locus_tag=HMPREF0889_1670;product=LysM domain protein;protein_id=EFD94120.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 136062 136190 . + . ID=gene-HMPREF0889_1671;Name=HMPREF0889_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1671 GCA_000177555.1|ADGP01000019.1 Genbank CDS 136062 136190 . + 0 ID=cds-EFD94121.1;Parent=gene-HMPREF0889_1671;Dbxref=NCBI_GP:EFD94121.1;Name=EFD94121.1;gbkey=CDS;locus_tag=HMPREF0889_1671;product=hypothetical protein;protein_id=EFD94121.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 136277 137314 . + . ID=gene-HMPREF0889_1672;Name=HMPREF0889_1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1672 GCA_000177555.1|ADGP01000019.1 Genbank CDS 136277 137314 . + 0 ID=cds-EFD94122.1;Parent=gene-HMPREF0889_1672;Dbxref=NCBI_GP:EFD94122.1;Name=EFD94122.1;Note=identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247;gbkey=CDS;locus_tag=HMPREF0889_1672;product=YceG family protein;protein_id=EFD94122.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 137311 137901 . + . ID=gene-HMPREF0889_1673;Name=HMPREF0889_1673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1673 GCA_000177555.1|ADGP01000019.1 Genbank CDS 137311 137901 . + 0 ID=cds-EFD94123.1;Parent=gene-HMPREF0889_1673;Dbxref=NCBI_GP:EFD94123.1;Name=EFD94123.1;Note=identified by match to protein family HMM PF01596;gbkey=CDS;locus_tag=HMPREF0889_1673;product=O-methyltransferase;protein_id=EFD94123.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 137914 139134 . + . ID=gene-HMPREF0889_1674;Name=HMPREF0889_1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1674 GCA_000177555.1|ADGP01000019.1 Genbank CDS 137914 139134 . + 0 ID=cds-EFD94124.1;Parent=gene-HMPREF0889_1674;Dbxref=NCBI_GP:EFD94124.1;Name=EFD94124.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=HMPREF0889_1674;product=peptidase%2C U32 family;protein_id=EFD94124.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 139131 139382 . + . ID=gene-HMPREF0889_1675;Name=HMPREF0889_1675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1675 GCA_000177555.1|ADGP01000019.1 Genbank CDS 139131 139382 . + 0 ID=cds-EFD94125.1;Parent=gene-HMPREF0889_1675;Dbxref=NCBI_GP:EFD94125.1;Name=EFD94125.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1675;product=hypothetical protein;protein_id=EFD94125.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 139474 141150 . + . ID=gene-HMPREF0889_1676;Name=HMPREF0889_1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1676 GCA_000177555.1|ADGP01000019.1 Genbank CDS 139474 141150 . + 0 ID=cds-EFD94126.1;Parent=gene-HMPREF0889_1676;Dbxref=NCBI_GP:EFD94126.1;Name=EFD94126.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1676;product=hypothetical protein;protein_id=EFD94126.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 141147 143291 . + . ID=gene-HMPREF0889_1677;Name=HMPREF0889_1677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1677 GCA_000177555.1|ADGP01000019.1 Genbank CDS 141147 143291 . + 0 ID=cds-EFD94127.1;Parent=gene-HMPREF0889_1677;Dbxref=NCBI_GP:EFD94127.1;Name=EFD94127.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056;gbkey=CDS;locus_tag=HMPREF0889_1677;product=DNA topoisomerase;protein_id=EFD94127.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 143278 144552 . + . ID=gene-HMPREF0889_1678;Name=HMPREF0889_1678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1678 GCA_000177555.1|ADGP01000019.1 Genbank CDS 143278 144552 . + 0 ID=cds-EFD94128.1;Parent=gene-HMPREF0889_1678;Dbxref=NCBI_GP:EFD94128.1;Name=EFD94128.1;gbkey=CDS;locus_tag=HMPREF0889_1678;product=tetratricopeptide repeat protein;protein_id=EFD94128.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 144549 145073 . + . ID=gene-HMPREF0889_1679;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HMPREF0889_1679 GCA_000177555.1|ADGP01000019.1 Genbank CDS 144549 145073 . + 0 ID=cds-EFD94129.1;Parent=gene-HMPREF0889_1679;Dbxref=NCBI_GP:EFD94129.1;Name=EFD94129.1;Note=identified by match to protein family HMM TIGR02274;gbkey=CDS;gene=dcd;locus_tag=HMPREF0889_1679;product=dCTP deaminase;protein_id=EFD94129.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 145086 146063 . + . ID=gene-HMPREF0889_1680;Name=HMPREF0889_1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1680 GCA_000177555.1|ADGP01000019.1 Genbank CDS 145086 146063 . + 0 ID=cds-EFD94130.1;Parent=gene-HMPREF0889_1680;Dbxref=NCBI_GP:EFD94130.1;Name=EFD94130.1;Note=identified by match to protein family HMM PF03576;gbkey=CDS;locus_tag=HMPREF0889_1680;product=peptidase family T4;protein_id=EFD94130.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 146167 146709 . + . ID=gene-HMPREF0889_1681;Name=HMPREF0889_1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1681 GCA_000177555.1|ADGP01000019.1 Genbank CDS 146167 146709 . + 0 ID=cds-EFD94131.1;Parent=gene-HMPREF0889_1681;Dbxref=NCBI_GP:EFD94131.1;Name=EFD94131.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1681;product=hypothetical protein;protein_id=EFD94131.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 146903 147307 . + . ID=gene-HMPREF0889_1682;Name=HMPREF0889_1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1682 GCA_000177555.1|ADGP01000019.1 Genbank CDS 146903 147307 . + 0 ID=cds-EFD94132.1;Parent=gene-HMPREF0889_1682;Dbxref=NCBI_GP:EFD94132.1;Name=EFD94132.1;gbkey=CDS;locus_tag=HMPREF0889_1682;product=hypothetical protein;protein_id=EFD94132.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 147487 148503 . + . ID=gene-HMPREF0889_1683;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=HMPREF0889_1683 GCA_000177555.1|ADGP01000019.1 Genbank CDS 147487 148503 . + 0 ID=cds-EFD94133.1;Parent=gene-HMPREF0889_1683;Dbxref=NCBI_GP:EFD94133.1;Name=EFD94133.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=HMPREF0889_1683;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=EFD94133.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 148661 149686 . + . ID=gene-HMPREF0889_1684;Name=HMPREF0889_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1684 GCA_000177555.1|ADGP01000019.1 Genbank CDS 148661 149686 . + 0 ID=cds-EFD94134.1;Parent=gene-HMPREF0889_1684;Dbxref=NCBI_GP:EFD94134.1;Name=EFD94134.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800;gbkey=CDS;locus_tag=HMPREF0889_1684;product=glyceraldehyde 3-phosphate dehydrogenase domain protein;protein_id=EFD94134.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 149717 150898 . + . ID=gene-HMPREF0889_1685;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=HMPREF0889_1685 GCA_000177555.1|ADGP01000019.1 Genbank CDS 149717 150898 . + 0 ID=cds-EFD94135.1;Parent=gene-HMPREF0889_1685;Dbxref=NCBI_GP:EFD94135.1;Name=EFD94135.1;Note=identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk;locus_tag=HMPREF0889_1685;product=phosphoglycerate kinase;protein_id=EFD94135.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 150916 151674 . + . ID=gene-HMPREF0889_1686;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1686 GCA_000177555.1|ADGP01000019.1 Genbank CDS 150916 151674 . + 0 ID=cds-EFD94136.1;Parent=gene-HMPREF0889_1686;Dbxref=NCBI_GP:EFD94136.1;Name=EFD94136.1;Note=identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419;gbkey=CDS;gene=tpiA;locus_tag=HMPREF0889_1686;product=triose-phosphate isomerase;protein_id=EFD94136.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 151718 151837 . + . ID=gene-HMPREF0889_1687;Name=HMPREF0889_1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1687 GCA_000177555.1|ADGP01000019.1 Genbank CDS 151718 151837 . + 0 ID=cds-EFD94137.1;Parent=gene-HMPREF0889_1687;Dbxref=NCBI_GP:EFD94137.1;Name=EFD94137.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1687;product=hypothetical protein;protein_id=EFD94137.1;transl_table=11 GCA_000177555.1|ADGP01000019.1 Genbank gene 152088 156177 . + . ID=gene-HMPREF0889_1688;Name=HMPREF0889_1688;end_range=156177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1688;partial=true GCA_000177555.1|ADGP01000019.1 Genbank CDS 152088 156177 . + 0 ID=cds-EFD94138.1;Parent=gene-HMPREF0889_1688;Dbxref=NCBI_GP:EFD94138.1;Name=EFD94138.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;end_range=156177,.;gbkey=CDS;locus_tag=HMPREF0889_1688;partial=true;product=Hep/Hag repeat protein;protein_id=EFD94138.1;transl_table=11 ##sequence-region ADGP01000018.1 1 46519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000018.1 Genbank region 1 46519 . + . ID=ADGP01000018.1:1..46519;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000018.1 Genbank gene 63 869 . + . ID=gene-HMPREF0889_0140;Name=HMPREF0889_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0140 GCA_000177555.1|ADGP01000018.1 Genbank CDS 63 869 . + 0 ID=cds-EFD94139.1;Parent=gene-HMPREF0889_0140;Dbxref=NCBI_GP:EFD94139.1;Name=EFD94139.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF03180%3B match to protein family HMM TIGR00363;gbkey=CDS;locus_tag=HMPREF0889_0140;product=lipoprotein%2C YaeC family;protein_id=EFD94139.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 993 1298 . + . ID=gene-HMPREF0889_0141;Name=HMPREF0889_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0141 GCA_000177555.1|ADGP01000018.1 Genbank CDS 993 1298 . + 0 ID=cds-EFD94140.1;Parent=gene-HMPREF0889_0141;Dbxref=NCBI_GP:EFD94140.1;Name=EFD94140.1;Note=identified by match to protein family HMM PF00085;gbkey=CDS;locus_tag=HMPREF0889_0141;product=putative thioredoxin;protein_id=EFD94140.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 1348 1746 . - . ID=gene-HMPREF0889_0142;Name=HMPREF0889_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0142 GCA_000177555.1|ADGP01000018.1 Genbank CDS 1348 1746 . - 0 ID=cds-EFD94141.1;Parent=gene-HMPREF0889_0142;Dbxref=NCBI_GP:EFD94141.1;Name=EFD94141.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;locus_tag=HMPREF0889_0142;product=thioesterase family protein;protein_id=EFD94141.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 1895 2308 . - . ID=gene-HMPREF0889_0143;Name=HMPREF0889_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0143 GCA_000177555.1|ADGP01000018.1 Genbank CDS 1895 2308 . - 0 ID=cds-EFD94142.1;Parent=gene-HMPREF0889_0143;Dbxref=NCBI_GP:EFD94142.1;Name=EFD94142.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753;gbkey=CDS;locus_tag=HMPREF0889_0143;product=flavodoxin;protein_id=EFD94142.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 2323 2880 . - . ID=gene-HMPREF0889_0144;Name=HMPREF0889_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0144 GCA_000177555.1|ADGP01000018.1 Genbank CDS 2323 2880 . - 0 ID=cds-EFD94143.1;Parent=gene-HMPREF0889_0144;Dbxref=NCBI_GP:EFD94143.1;Name=EFD94143.1;gbkey=CDS;locus_tag=HMPREF0889_0144;product=hypothetical protein;protein_id=EFD94143.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 3190 3855 . + . ID=gene-HMPREF0889_0145;Name=HMPREF0889_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0145 GCA_000177555.1|ADGP01000018.1 Genbank CDS 3190 3855 . + 0 ID=cds-EFD94144.1;Parent=gene-HMPREF0889_0145;Dbxref=NCBI_GP:EFD94144.1;Name=EFD94144.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=HMPREF0889_0145;product=exonuclease;protein_id=EFD94144.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 3886 4275 . + . ID=gene-HMPREF0889_0146;Name=HMPREF0889_0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0146 GCA_000177555.1|ADGP01000018.1 Genbank CDS 3886 4275 . + 0 ID=cds-EFD94145.1;Parent=gene-HMPREF0889_0146;Dbxref=NCBI_GP:EFD94145.1;Name=EFD94145.1;Note=identified by match to protein family HMM PF07009;gbkey=CDS;locus_tag=HMPREF0889_0146;product=hypothetical protein;protein_id=EFD94145.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 4286 4810 . + . ID=gene-HMPREF0889_0147;Name=HMPREF0889_0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0147 GCA_000177555.1|ADGP01000018.1 Genbank CDS 4286 4810 . + 0 ID=cds-EFD94146.1;Parent=gene-HMPREF0889_0147;Dbxref=NCBI_GP:EFD94146.1;Name=EFD94146.1;Note=identified by match to protein family HMM PF07456;gbkey=CDS;locus_tag=HMPREF0889_0147;product=heptaprenyl diphosphate synthase component I;protein_id=EFD94146.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 4876 5442 . - . ID=gene-HMPREF0889_0148;Name=HMPREF0889_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0148 GCA_000177555.1|ADGP01000018.1 Genbank CDS 4876 5442 . - 0 ID=cds-EFD94147.1;Parent=gene-HMPREF0889_0148;Dbxref=NCBI_GP:EFD94147.1;Name=EFD94147.1;Note=identified by match to protein family HMM PF01380;gbkey=CDS;locus_tag=HMPREF0889_0148;product=putative phosphoheptose isomerase;protein_id=EFD94147.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 5458 6018 . - . ID=gene-HMPREF0889_0149;Name=cah;gbkey=Gene;gene=cah;gene_biotype=protein_coding;locus_tag=HMPREF0889_0149 GCA_000177555.1|ADGP01000018.1 Genbank CDS 5458 6018 . - 0 ID=cds-EFD94148.1;Parent=gene-HMPREF0889_0149;Dbxref=NCBI_GP:EFD94148.1;Name=EFD94148.1;Note=identified by match to protein family HMM PF00484;gbkey=CDS;gene=cah;locus_tag=HMPREF0889_0149;product=carbonate dehydratase;protein_id=EFD94148.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 6029 7378 . - . ID=gene-HMPREF0889_0150;Name=HMPREF0889_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0150 GCA_000177555.1|ADGP01000018.1 Genbank CDS 6029 7378 . - 0 ID=cds-EFD94149.1;Parent=gene-HMPREF0889_0150;Dbxref=NCBI_GP:EFD94149.1;Name=EFD94149.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF0889_0150;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFD94149.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 7645 7721 . - . ID=gene-HMPREF0889_0151;Name=HMPREF0889_0151;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0151 GCA_000177555.1|ADGP01000018.1 Genbank tRNA 7645 7721 . - . ID=rna-HMPREF0889_0151;Parent=gene-HMPREF0889_0151;gbkey=tRNA;locus_tag=HMPREF0889_0151;product=tRNA-Arg GCA_000177555.1|ADGP01000018.1 Genbank exon 7645 7721 . - . ID=exon-HMPREF0889_0151-1;Parent=rna-HMPREF0889_0151;gbkey=tRNA;locus_tag=HMPREF0889_0151;product=tRNA-Arg GCA_000177555.1|ADGP01000018.1 Genbank gene 7884 8015 . - . ID=gene-HMPREF0889_0152;Name=HMPREF0889_0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0152 GCA_000177555.1|ADGP01000018.1 Genbank CDS 7884 8015 . - 0 ID=cds-EFD94150.1;Parent=gene-HMPREF0889_0152;Dbxref=NCBI_GP:EFD94150.1;Name=EFD94150.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0152;product=hypothetical protein;protein_id=EFD94150.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 8100 9134 . - . ID=gene-HMPREF0889_0153;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=HMPREF0889_0153 GCA_000177555.1|ADGP01000018.1 Genbank CDS 8100 9134 . - 0 ID=cds-EFD94151.1;Parent=gene-HMPREF0889_0153;Dbxref=NCBI_GP:EFD94151.1;Name=EFD94151.1;Note=identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651;gbkey=CDS;gene=pta;locus_tag=HMPREF0889_0153;product=phosphate acetyltransferase;protein_id=EFD94151.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 9347 9886 . - . ID=gene-HMPREF0889_0154;Name=HMPREF0889_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0154 GCA_000177555.1|ADGP01000018.1 Genbank CDS 9347 9886 . - 0 ID=cds-EFD94152.1;Parent=gene-HMPREF0889_0154;Dbxref=NCBI_GP:EFD94152.1;Name=EFD94152.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF0889_0154;product=2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family;protein_id=EFD94152.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 9888 10634 . - . ID=gene-HMPREF0889_0155;Name=HMPREF0889_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0155 GCA_000177555.1|ADGP01000018.1 Genbank CDS 9888 10634 . - 0 ID=cds-EFD94153.1;Parent=gene-HMPREF0889_0155;Dbxref=NCBI_GP:EFD94153.1;Name=EFD94153.1;Note=identified by match to protein family HMM PF02775;gbkey=CDS;locus_tag=HMPREF0889_0155;product=thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein;protein_id=EFD94153.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 10636 11703 . - . ID=gene-HMPREF0889_0156;Name=HMPREF0889_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0156 GCA_000177555.1|ADGP01000018.1 Genbank CDS 10636 11703 . - 0 ID=cds-EFD94154.1;Parent=gene-HMPREF0889_0156;Dbxref=NCBI_GP:EFD94154.1;Name=EFD94154.1;Note=identified by match to protein family HMM PF01855%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF0889_0156;product=3-methyl-2-oxobutanoate dehydrogenase (ferredoxin);protein_id=EFD94154.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 11718 11927 . - . ID=gene-HMPREF0889_0157;Name=HMPREF0889_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0157 GCA_000177555.1|ADGP01000018.1 Genbank CDS 11718 11927 . - 0 ID=cds-EFD94155.1;Parent=gene-HMPREF0889_0157;Dbxref=NCBI_GP:EFD94155.1;Name=EFD94155.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF0889_0157;product=4Fe-4S binding domain protein;protein_id=EFD94155.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 11957 12634 . - . ID=gene-HMPREF0889_0158;Name=HMPREF0889_0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0158 GCA_000177555.1|ADGP01000018.1 Genbank CDS 11957 12634 . - 0 ID=cds-EFD94156.1;Parent=gene-HMPREF0889_0158;Dbxref=NCBI_GP:EFD94156.1;Name=EFD94156.1;gbkey=CDS;locus_tag=HMPREF0889_0158;product=hypothetical protein;protein_id=EFD94156.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 13071 13616 . - . ID=gene-HMPREF0889_0159;Name=HMPREF0889_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0159 GCA_000177555.1|ADGP01000018.1 Genbank CDS 13071 13616 . - 0 ID=cds-EFD94157.1;Parent=gene-HMPREF0889_0159;Dbxref=NCBI_GP:EFD94157.1;Name=EFD94157.1;Note=identified by match to protein family HMM PF00255;gbkey=CDS;locus_tag=HMPREF0889_0159;product=glutathione peroxidase;protein_id=EFD94157.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 14075 15358 . - . ID=gene-HMPREF0889_0160;Name=HMPREF0889_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0160 GCA_000177555.1|ADGP01000018.1 Genbank CDS 14075 15358 . - 0 ID=cds-EFD94158.1;Parent=gene-HMPREF0889_0160;Dbxref=NCBI_GP:EFD94158.1;Name=EFD94158.1;Note=identified by match to protein family HMM PF04286;gbkey=CDS;locus_tag=HMPREF0889_0160;product=hypothetical protein;protein_id=EFD94158.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 15360 16631 . - . ID=gene-HMPREF0889_0161;Name=HMPREF0889_0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0161 GCA_000177555.1|ADGP01000018.1 Genbank CDS 15360 16631 . - 0 ID=cds-EFD94159.1;Parent=gene-HMPREF0889_0161;Dbxref=NCBI_GP:EFD94159.1;Name=EFD94159.1;Note=identified by match to protein family HMM PF04286;gbkey=CDS;locus_tag=HMPREF0889_0161;product=hypothetical protein;protein_id=EFD94159.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 16631 17368 . - . ID=gene-HMPREF0889_0162;Name=HMPREF0889_0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0162 GCA_000177555.1|ADGP01000018.1 Genbank CDS 16631 17368 . - 0 ID=cds-EFD94160.1;Parent=gene-HMPREF0889_0162;Dbxref=NCBI_GP:EFD94160.1;Name=EFD94160.1;gbkey=CDS;locus_tag=HMPREF0889_0162;product=hypothetical protein;protein_id=EFD94160.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 17579 18532 . + . ID=gene-HMPREF0889_0163;Name=HMPREF0889_0163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0163 GCA_000177555.1|ADGP01000018.1 Genbank CDS 17579 18532 . + 0 ID=cds-EFD94161.1;Parent=gene-HMPREF0889_0163;Dbxref=NCBI_GP:EFD94161.1;Name=EFD94161.1;Note=identified by match to protein family HMM PF08331;gbkey=CDS;locus_tag=HMPREF0889_0163;product=putative iron-sulfur cluster-binding protein;protein_id=EFD94161.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 19003 19950 . - . ID=gene-HMPREF0889_0164;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0164 GCA_000177555.1|ADGP01000018.1 Genbank CDS 19003 19950 . - 0 ID=cds-EFD94162.1;Parent=gene-HMPREF0889_0164;Dbxref=NCBI_GP:EFD94162.1;Name=EFD94162.1;Note=identified by match to protein family HMM PF01343%3B match to protein family HMM TIGR00706;gbkey=CDS;gene=sppA;locus_tag=HMPREF0889_0164;product=signal peptide peptidase SppA%2C 36K type;protein_id=EFD94162.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 20005 21330 . - . ID=gene-HMPREF0889_0165;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0165 GCA_000177555.1|ADGP01000018.1 Genbank CDS 20005 21330 . - 0 ID=cds-EFD94163.1;Parent=gene-HMPREF0889_0165;Dbxref=NCBI_GP:EFD94163.1;Name=EFD94163.1;Note=identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;locus_tag=HMPREF0889_0165;product=replicative DNA helicase;protein_id=EFD94163.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 21341 23248 . - . ID=gene-HMPREF0889_0166;Name=lonC;gbkey=Gene;gene=lonC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0166 GCA_000177555.1|ADGP01000018.1 Genbank CDS 21341 23248 . - 0 ID=cds-EFD94164.1;Parent=gene-HMPREF0889_0166;Dbxref=NCBI_GP:EFD94164.1;Name=EFD94164.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02903;gbkey=CDS;gene=lonC;locus_tag=HMPREF0889_0166;product=ATP-dependent protease%2C Lon family;protein_id=EFD94164.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 23265 23711 . - . ID=gene-HMPREF0889_0167;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HMPREF0889_0167 GCA_000177555.1|ADGP01000018.1 Genbank CDS 23265 23711 . - 0 ID=cds-EFD94165.1;Parent=gene-HMPREF0889_0167;Dbxref=NCBI_GP:EFD94165.1;Name=EFD94165.1;Note=identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158;gbkey=CDS;gene=rplI;locus_tag=HMPREF0889_0167;product=ribosomal protein L9;protein_id=EFD94165.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 23708 25729 . - . ID=gene-HMPREF0889_0168;Name=HMPREF0889_0168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0168 GCA_000177555.1|ADGP01000018.1 Genbank CDS 23708 25729 . - 0 ID=cds-EFD94166.1;Parent=gene-HMPREF0889_0168;Dbxref=NCBI_GP:EFD94166.1;Name=EFD94166.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF0889_0168;product=DHHA1 domain protein;protein_id=EFD94166.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 25748 26665 . - . ID=gene-HMPREF0889_0169;Name=HMPREF0889_0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0169 GCA_000177555.1|ADGP01000018.1 Genbank CDS 25748 26665 . - 0 ID=cds-EFD94167.1;Parent=gene-HMPREF0889_0169;Dbxref=NCBI_GP:EFD94167.1;Name=EFD94167.1;gbkey=CDS;locus_tag=HMPREF0889_0169;product=hypothetical protein;protein_id=EFD94167.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 26791 28452 . - . ID=gene-HMPREF0889_0170;Name=HMPREF0889_0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0170 GCA_000177555.1|ADGP01000018.1 Genbank CDS 26791 28452 . - 0 ID=cds-EFD94168.1;Parent=gene-HMPREF0889_0170;Dbxref=NCBI_GP:EFD94168.1;Name=EFD94168.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649;gbkey=CDS;locus_tag=HMPREF0889_0170;product=hypothetical protein;protein_id=EFD94168.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 28678 29604 . - . ID=gene-HMPREF0889_0171;Name=HMPREF0889_0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0171 GCA_000177555.1|ADGP01000018.1 Genbank CDS 28678 29604 . - 0 ID=cds-EFD94169.1;Parent=gene-HMPREF0889_0171;Dbxref=NCBI_GP:EFD94169.1;Name=EFD94169.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0171;product=hypothetical protein;protein_id=EFD94169.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 29635 30435 . - . ID=gene-HMPREF0889_0172;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0172 GCA_000177555.1|ADGP01000018.1 Genbank CDS 29635 30435 . - 0 ID=cds-EFD94170.1;Parent=gene-HMPREF0889_0172;Dbxref=NCBI_GP:EFD94170.1;Name=EFD94170.1;Note=identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097;gbkey=CDS;gene=thiD;locus_tag=HMPREF0889_0172;product=phosphomethylpyrimidine kinase;protein_id=EFD94170.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 30449 30949 . - . ID=gene-HMPREF0889_0173;Name=HMPREF0889_0173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0173 GCA_000177555.1|ADGP01000018.1 Genbank CDS 30449 30949 . - 0 ID=cds-EFD94171.1;Parent=gene-HMPREF0889_0173;Dbxref=NCBI_GP:EFD94171.1;Name=EFD94171.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF0889_0173;product=putative phosphohistidine phosphatase SixA;protein_id=EFD94171.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 30967 31326 . - . ID=gene-HMPREF0889_0174;Name=HMPREF0889_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0174 GCA_000177555.1|ADGP01000018.1 Genbank CDS 30967 31326 . - 0 ID=cds-EFD94172.1;Parent=gene-HMPREF0889_0174;Dbxref=NCBI_GP:EFD94172.1;Name=EFD94172.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;locus_tag=HMPREF0889_0174;product=transcriptional regulator%2C ArsR family;protein_id=EFD94172.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 31451 31951 . - . ID=gene-HMPREF0889_0175;Name=HMPREF0889_0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0175 GCA_000177555.1|ADGP01000018.1 Genbank CDS 31451 31951 . - 0 ID=cds-EFD94173.1;Parent=gene-HMPREF0889_0175;Dbxref=NCBI_GP:EFD94173.1;Name=EFD94173.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF0889_0175;product=transcriptional regulator%2C Fur family;protein_id=EFD94173.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 31957 32769 . - . ID=gene-HMPREF0889_0176;Name=HMPREF0889_0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0176 GCA_000177555.1|ADGP01000018.1 Genbank CDS 31957 32769 . - 0 ID=cds-EFD94174.1;Parent=gene-HMPREF0889_0176;Dbxref=NCBI_GP:EFD94174.1;Name=EFD94174.1;Note=identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF0889_0176;product=ABC 3 transport family protein;protein_id=EFD94174.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 32762 33487 . - . ID=gene-HMPREF0889_0177;Name=HMPREF0889_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0177 GCA_000177555.1|ADGP01000018.1 Genbank CDS 32762 33487 . - 0 ID=cds-EFD94175.1;Parent=gene-HMPREF0889_0177;Dbxref=NCBI_GP:EFD94175.1;Name=EFD94175.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0177;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94175.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 33627 34547 . + . ID=gene-HMPREF0889_0178;Name=HMPREF0889_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0178 GCA_000177555.1|ADGP01000018.1 Genbank CDS 33627 34547 . + 0 ID=cds-EFD94176.1;Parent=gene-HMPREF0889_0178;Dbxref=NCBI_GP:EFD94176.1;Name=EFD94176.1;Note=identified by match to protein family HMM PF01297;gbkey=CDS;locus_tag=HMPREF0889_0178;product=ABC transporter%2C substrate-binding protein;protein_id=EFD94176.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 34653 35237 . - . ID=gene-HMPREF0889_0179;Name=HMPREF0889_0179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0179 GCA_000177555.1|ADGP01000018.1 Genbank CDS 34653 35237 . - 0 ID=cds-EFD94177.1;Parent=gene-HMPREF0889_0179;Dbxref=NCBI_GP:EFD94177.1;Name=EFD94177.1;Note=identified by match to protein family HMM PF01510;gbkey=CDS;locus_tag=HMPREF0889_0179;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EFD94177.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 35651 35935 . - . ID=gene-HMPREF0889_0180;Name=HMPREF0889_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0180 GCA_000177555.1|ADGP01000018.1 Genbank CDS 35651 35935 . - 0 ID=cds-EFD94178.1;Parent=gene-HMPREF0889_0180;Dbxref=NCBI_GP:EFD94178.1;Name=EFD94178.1;gbkey=CDS;locus_tag=HMPREF0889_0180;product=putative Ferredoxin-like protein FixX;protein_id=EFD94178.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 35937 37232 . - . ID=gene-HMPREF0889_0181;Name=HMPREF0889_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0181 GCA_000177555.1|ADGP01000018.1 Genbank CDS 35937 37232 . - 0 ID=cds-EFD94179.1;Parent=gene-HMPREF0889_0181;Dbxref=NCBI_GP:EFD94179.1;Name=EFD94179.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494%3B match to protein family HMM PF03486;gbkey=CDS;locus_tag=HMPREF0889_0181;product=FAD dependent oxidoreductase;protein_id=EFD94179.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 37279 37992 . - . ID=gene-HMPREF0889_0182;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0182 GCA_000177555.1|ADGP01000018.1 Genbank CDS 37279 37992 . - 0 ID=cds-EFD94180.1;Parent=gene-HMPREF0889_0182;Dbxref=NCBI_GP:EFD94180.1;Name=EFD94180.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934;gbkey=CDS;gene=ubiE;locus_tag=HMPREF0889_0182;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=EFD94180.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 37985 38893 . - . ID=gene-HMPREF0889_0183;Name=HMPREF0889_0183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0183 GCA_000177555.1|ADGP01000018.1 Genbank CDS 37985 38893 . - 0 ID=cds-EFD94181.1;Parent=gene-HMPREF0889_0183;Dbxref=NCBI_GP:EFD94181.1;Name=EFD94181.1;Note=identified by match to protein family HMM PF01040;gbkey=CDS;locus_tag=HMPREF0889_0183;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=EFD94181.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 38917 39930 . - . ID=gene-HMPREF0889_0184;Name=HMPREF0889_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0184 GCA_000177555.1|ADGP01000018.1 Genbank CDS 38917 39930 . - 0 ID=cds-EFD94182.1;Parent=gene-HMPREF0889_0184;Dbxref=NCBI_GP:EFD94182.1;Name=EFD94182.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;locus_tag=HMPREF0889_0184;product=polyprenyl synthetase;protein_id=EFD94182.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 39961 42123 . - . ID=gene-HMPREF0889_0185;Name=HMPREF0889_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0185 GCA_000177555.1|ADGP01000018.1 Genbank CDS 39961 42123 . - 0 ID=cds-EFD94183.1;Parent=gene-HMPREF0889_0185;Dbxref=NCBI_GP:EFD94183.1;Name=EFD94183.1;Note=identified by match to protein family HMM PF02589%3B match to protein family HMM PF02754;gbkey=CDS;locus_tag=HMPREF0889_0185;product=putative iron-sulfur cluster-binding protein;protein_id=EFD94183.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 42139 42684 . - . ID=gene-HMPREF0889_0186;Name=HMPREF0889_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0186 GCA_000177555.1|ADGP01000018.1 Genbank CDS 42139 42684 . - 0 ID=cds-EFD94184.1;Parent=gene-HMPREF0889_0186;Dbxref=NCBI_GP:EFD94184.1;Name=EFD94184.1;Note=identified by match to protein family HMM PF02589;gbkey=CDS;locus_tag=HMPREF0889_0186;product=hypothetical protein;protein_id=EFD94184.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 43206 43577 . - . ID=gene-HMPREF0889_0187;Name=HMPREF0889_0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0187 GCA_000177555.1|ADGP01000018.1 Genbank CDS 43206 43577 . - 0 ID=cds-EFD94185.1;Parent=gene-HMPREF0889_0187;Dbxref=NCBI_GP:EFD94185.1;Name=EFD94185.1;Note=identified by match to protein family HMM PF07892;gbkey=CDS;locus_tag=HMPREF0889_0187;product=hypothetical protein;protein_id=EFD94185.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 43579 44847 . - . ID=gene-HMPREF0889_0188;Name=HMPREF0889_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0188 GCA_000177555.1|ADGP01000018.1 Genbank CDS 43579 44847 . - 0 ID=cds-EFD94186.1;Parent=gene-HMPREF0889_0188;Dbxref=NCBI_GP:EFD94186.1;Name=EFD94186.1;Note=identified by match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF0889_0188;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EFD94186.1;transl_table=11 GCA_000177555.1|ADGP01000018.1 Genbank gene 44847 46313 . - . ID=gene-HMPREF0889_0189;Name=HMPREF0889_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0189 GCA_000177555.1|ADGP01000018.1 Genbank CDS 44847 46313 . - 0 ID=cds-EFD94187.1;Parent=gene-HMPREF0889_0189;Dbxref=NCBI_GP:EFD94187.1;Name=EFD94187.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF04324;gbkey=CDS;locus_tag=HMPREF0889_0189;product=FAD dependent oxidoreductase;protein_id=EFD94187.1;transl_table=11 ##sequence-region ADGP01000017.1 1 41908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000017.1 Genbank region 1 41908 . + . ID=ADGP01000017.1:1..41908;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000017.1 Genbank gene 10 126 . + . ID=gene-HMPREF0889_1305;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF0889_1305 GCA_000177555.1|ADGP01000017.1 Genbank rRNA 10 126 . + . ID=rna-HMPREF0889_1305;Parent=gene-HMPREF0889_1305;gbkey=rRNA;gene=rrf;locus_tag=HMPREF0889_1305;product=5S ribosomal RNA GCA_000177555.1|ADGP01000017.1 Genbank exon 10 126 . + . ID=exon-HMPREF0889_1305-1;Parent=rna-HMPREF0889_1305;gbkey=rRNA;gene=rrf;locus_tag=HMPREF0889_1305;product=5S ribosomal RNA GCA_000177555.1|ADGP01000017.1 Genbank gene 132 207 . + . ID=gene-HMPREF0889_1306;Name=HMPREF0889_1306;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1306 GCA_000177555.1|ADGP01000017.1 Genbank tRNA 132 207 . + . ID=rna-HMPREF0889_1306;Parent=gene-HMPREF0889_1306;gbkey=tRNA;locus_tag=HMPREF0889_1306;product=tRNA-Trp GCA_000177555.1|ADGP01000017.1 Genbank exon 132 207 . + . ID=exon-HMPREF0889_1306-1;Parent=rna-HMPREF0889_1306;gbkey=tRNA;locus_tag=HMPREF0889_1306;product=tRNA-Trp GCA_000177555.1|ADGP01000017.1 Genbank gene 244 320 . + . ID=gene-HMPREF0889_1307;Name=HMPREF0889_1307;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1307 GCA_000177555.1|ADGP01000017.1 Genbank tRNA 244 320 . + . ID=rna-HMPREF0889_1307;Parent=gene-HMPREF0889_1307;gbkey=tRNA;locus_tag=HMPREF0889_1307;product=tRNA-Arg GCA_000177555.1|ADGP01000017.1 Genbank exon 244 320 . + . ID=exon-HMPREF0889_1307-1;Parent=rna-HMPREF0889_1307;gbkey=tRNA;locus_tag=HMPREF0889_1307;product=tRNA-Arg GCA_000177555.1|ADGP01000017.1 Genbank gene 1027 2109 . + . ID=gene-HMPREF0889_1308;Name=HMPREF0889_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1308 GCA_000177555.1|ADGP01000017.1 Genbank CDS 1027 2109 . + 0 ID=cds-EFD94188.1;Parent=gene-HMPREF0889_1308;Dbxref=NCBI_GP:EFD94188.1;Name=EFD94188.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF0889_1308;product=glycosyltransferase%2C group 2 family protein;protein_id=EFD94188.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 2126 2809 . + . ID=gene-HMPREF0889_1309;Name=HMPREF0889_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1309 GCA_000177555.1|ADGP01000017.1 Genbank CDS 2126 2809 . + 0 ID=cds-EFD94189.1;Parent=gene-HMPREF0889_1309;Dbxref=NCBI_GP:EFD94189.1;Name=EFD94189.1;Note=identified by match to protein family HMM PF00877%3B match to protein family HMM PF01471;gbkey=CDS;locus_tag=HMPREF0889_1309;product=NlpC/P60 family protein;protein_id=EFD94189.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 2901 5510 . + . ID=gene-HMPREF0889_1310;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1310 GCA_000177555.1|ADGP01000017.1 Genbank CDS 2901 5510 . + 0 ID=cds-EFD94190.1;Parent=gene-HMPREF0889_1310;Dbxref=NCBI_GP:EFD94190.1;Name=EFD94190.1;Note=identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344;gbkey=CDS;gene=alaS;locus_tag=HMPREF0889_1310;product=alanine--tRNA ligase;protein_id=EFD94190.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 5547 5807 . + . ID=gene-HMPREF0889_1311;Name=HMPREF0889_1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1311 GCA_000177555.1|ADGP01000017.1 Genbank CDS 5547 5807 . + 0 ID=cds-EFD94191.1;Parent=gene-HMPREF0889_1311;Dbxref=NCBI_GP:EFD94191.1;Name=EFD94191.1;Note=identified by match to protein family HMM PF06135;gbkey=CDS;locus_tag=HMPREF0889_1311;product=hypothetical protein;protein_id=EFD94191.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 5804 6235 . + . ID=gene-HMPREF0889_1312;Name=HMPREF0889_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1312 GCA_000177555.1|ADGP01000017.1 Genbank CDS 5804 6235 . + 0 ID=cds-EFD94192.1;Parent=gene-HMPREF0889_1312;Dbxref=NCBI_GP:EFD94192.1;Name=EFD94192.1;Note=identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250;gbkey=CDS;locus_tag=HMPREF0889_1312;product=RNAse H domain protein%2C YqgF family;protein_id=EFD94192.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 6355 6675 . + . ID=gene-HMPREF0889_1313;Name=HMPREF0889_1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1313 GCA_000177555.1|ADGP01000017.1 Genbank CDS 6355 6675 . + 0 ID=cds-EFD94193.1;Parent=gene-HMPREF0889_1313;Dbxref=NCBI_GP:EFD94193.1;Name=EFD94193.1;gbkey=CDS;locus_tag=HMPREF0889_1313;product=hypothetical protein;protein_id=EFD94193.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 6776 7681 . + . ID=gene-HMPREF0889_1314;Name=HMPREF0889_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1314 GCA_000177555.1|ADGP01000017.1 Genbank CDS 6776 7681 . + 0 ID=cds-EFD94194.1;Parent=gene-HMPREF0889_1314;Dbxref=NCBI_GP:EFD94194.1;Name=EFD94194.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=HMPREF0889_1314;product=transcriptional regulator%2C LysR family;protein_id=EFD94194.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 7799 9004 . + . ID=gene-HMPREF0889_1315;Name=HMPREF0889_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1315 GCA_000177555.1|ADGP01000017.1 Genbank CDS 7799 9004 . + 0 ID=cds-EFD94195.1;Parent=gene-HMPREF0889_1315;Dbxref=NCBI_GP:EFD94195.1;Name=EFD94195.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF0889_1315;product=transporter%2C major facilitator family protein;protein_id=EFD94195.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 9149 9673 . + . ID=gene-HMPREF0889_1316;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1316 GCA_000177555.1|ADGP01000017.1 Genbank CDS 9149 9673 . + 0 ID=cds-EFD94196.1;Parent=gene-HMPREF0889_1316;Dbxref=NCBI_GP:EFD94196.1;Name=EFD94196.1;Note=identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=raiA;locus_tag=HMPREF0889_1316;product=ribosomal subunit interface protein;protein_id=EFD94196.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 9853 10542 . + . ID=gene-HMPREF0889_1317;Name=HMPREF0889_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1317 GCA_000177555.1|ADGP01000017.1 Genbank CDS 9853 10542 . + 0 ID=cds-EFD94197.1;Parent=gene-HMPREF0889_1317;Dbxref=NCBI_GP:EFD94197.1;Name=EFD94197.1;Note=identified by match to protein family HMM PF04816;gbkey=CDS;locus_tag=HMPREF0889_1317;product=hypothetical protein;protein_id=EFD94197.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 10527 11648 . + . ID=gene-HMPREF0889_1318;Name=HMPREF0889_1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1318 GCA_000177555.1|ADGP01000017.1 Genbank CDS 10527 11648 . + 0 ID=cds-EFD94198.1;Parent=gene-HMPREF0889_1318;Dbxref=NCBI_GP:EFD94198.1;Name=EFD94198.1;Note=identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;locus_tag=HMPREF0889_1318;product=dinuclear metal center protein%2C YbgI family;protein_id=EFD94198.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 11660 12307 . + . ID=gene-HMPREF0889_1319;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1319 GCA_000177555.1|ADGP01000017.1 Genbank CDS 11660 12307 . + 0 ID=cds-EFD94199.1;Parent=gene-HMPREF0889_1319;Dbxref=NCBI_GP:EFD94199.1;Name=EFD94199.1;Note=identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693;gbkey=CDS;gene=thiE;locus_tag=HMPREF0889_1319;product=thiamine-phosphate diphosphorylase;protein_id=EFD94199.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 12374 12670 . + . ID=gene-HMPREF0889_1320;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF0889_1320 GCA_000177555.1|ADGP01000017.1 Genbank RNase_P_RNA 12374 12670 . + . ID=rna-HMPREF0889_1320;Parent=gene-HMPREF0889_1320;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF0889_1320;product=Bacterial RNase P class A GCA_000177555.1|ADGP01000017.1 Genbank exon 12374 12670 . + . ID=exon-HMPREF0889_1320-1;Parent=rna-HMPREF0889_1320;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF0889_1320;product=Bacterial RNase P class A GCA_000177555.1|ADGP01000017.1 Genbank gene 12829 14052 . + . ID=gene-HMPREF0889_1321;Name=HMPREF0889_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1321 GCA_000177555.1|ADGP01000017.1 Genbank CDS 12829 14052 . + 0 ID=cds-EFD94200.1;Parent=gene-HMPREF0889_1321;Dbxref=NCBI_GP:EFD94200.1;Name=EFD94200.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657;gbkey=CDS;locus_tag=HMPREF0889_1321;product=aspartate kinase%2C monofunctional class;protein_id=EFD94200.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 14062 14361 . + . ID=gene-HMPREF0889_1322;Name=HMPREF0889_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1322 GCA_000177555.1|ADGP01000017.1 Genbank CDS 14062 14361 . + 0 ID=cds-EFD94201.1;Parent=gene-HMPREF0889_1322;Dbxref=NCBI_GP:EFD94201.1;Name=EFD94201.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1322;product=hypothetical protein;protein_id=EFD94201.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 14416 14793 . + . ID=gene-HMPREF0889_1323;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1323 GCA_000177555.1|ADGP01000017.1 Genbank CDS 14416 14793 . + 0 ID=cds-EFD94202.1;Parent=gene-HMPREF0889_1323;Dbxref=NCBI_GP:EFD94202.1;Name=EFD94202.1;Note=identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556;gbkey=CDS;gene=acpS;locus_tag=HMPREF0889_1323;product=holo-[acyl-carrier-protein] synthase;protein_id=EFD94202.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 14805 16481 . + . ID=gene-HMPREF0889_1324;Name=HMPREF0889_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1324 GCA_000177555.1|ADGP01000017.1 Genbank CDS 14805 16481 . + 0 ID=cds-EFD94203.1;Parent=gene-HMPREF0889_1324;Dbxref=NCBI_GP:EFD94203.1;Name=EFD94203.1;Note=identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197;gbkey=CDS;locus_tag=HMPREF0889_1324;product=YjeF domain protein;protein_id=EFD94203.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 16478 17620 . + . ID=gene-HMPREF0889_1325;Name=HMPREF0889_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1325 GCA_000177555.1|ADGP01000017.1 Genbank CDS 16478 17620 . + 0 ID=cds-EFD94204.1;Parent=gene-HMPREF0889_1325;Dbxref=NCBI_GP:EFD94204.1;Name=EFD94204.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;locus_tag=HMPREF0889_1325;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EFD94204.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 17677 18027 . - . ID=gene-HMPREF0889_1326;Name=HMPREF0889_1326;gbkey=Gene;gene_biotype=tmRNA;locus_tag=HMPREF0889_1326 GCA_000177555.1|ADGP01000017.1 Genbank tmRNA 17677 18027 . - . ID=rna-HMPREF0889_1326;Parent=gene-HMPREF0889_1326;gbkey=tmRNA;locus_tag=HMPREF0889_1326 GCA_000177555.1|ADGP01000017.1 Genbank exon 17677 18027 . - . ID=exon-HMPREF0889_1326-1;Parent=rna-HMPREF0889_1326;gbkey=tmRNA;locus_tag=HMPREF0889_1326 GCA_000177555.1|ADGP01000017.1 Genbank gene 18190 19221 . + . ID=gene-HMPREF0889_1327;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=HMPREF0889_1327 GCA_000177555.1|ADGP01000017.1 Genbank CDS 18190 19221 . + 0 ID=cds-EFD94205.1;Parent=gene-HMPREF0889_1327;Dbxref=NCBI_GP:EFD94205.1;Name=EFD94205.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=HMPREF0889_1327;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=EFD94205.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 19222 20853 . + . ID=gene-HMPREF0889_1328;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=HMPREF0889_1328 GCA_000177555.1|ADGP01000017.1 Genbank CDS 19222 20853 . + 0 ID=cds-EFD94206.1;Parent=gene-HMPREF0889_1328;Dbxref=NCBI_GP:EFD94206.1;Name=EFD94206.1;Note=identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307;gbkey=CDS;gene=gpmI;locus_tag=HMPREF0889_1328;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=EFD94206.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 20935 21396 . + . ID=gene-HMPREF0889_1329;Name=HMPREF0889_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1329 GCA_000177555.1|ADGP01000017.1 Genbank CDS 20935 21396 . + 0 ID=cds-EFD94207.1;Parent=gene-HMPREF0889_1329;Dbxref=NCBI_GP:EFD94207.1;Name=EFD94207.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF0889_1329;product=transcriptional regulator%2C Rrf2 family;protein_id=EFD94207.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 21573 25130 . + . ID=gene-HMPREF0889_1330;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=HMPREF0889_1330 GCA_000177555.1|ADGP01000017.1 Genbank CDS 21573 25130 . + 0 ID=cds-EFD94208.1;Parent=gene-HMPREF0889_1330;Dbxref=NCBI_GP:EFD94208.1;Name=EFD94208.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR02168;gbkey=CDS;gene=smc;locus_tag=HMPREF0889_1330;product=chromosome segregation protein SMC;protein_id=EFD94208.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 25133 26074 . + . ID=gene-HMPREF0889_1331;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=HMPREF0889_1331 GCA_000177555.1|ADGP01000017.1 Genbank CDS 25133 26074 . + 0 ID=cds-EFD94209.1;Parent=gene-HMPREF0889_1331;Dbxref=NCBI_GP:EFD94209.1;Name=EFD94209.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064;gbkey=CDS;gene=ftsY;locus_tag=HMPREF0889_1331;product=signal recognition particle-docking protein FtsY;protein_id=EFD94209.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 26172 26984 . + . ID=gene-HMPREF0889_1332;Name=HMPREF0889_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1332 GCA_000177555.1|ADGP01000017.1 Genbank CDS 26172 26984 . + 0 ID=cds-EFD94210.1;Parent=gene-HMPREF0889_1332;Dbxref=NCBI_GP:EFD94210.1;Name=EFD94210.1;Note=identified by match to protein family HMM PF02110;gbkey=CDS;locus_tag=HMPREF0889_1332;product=hydroxyethylthiazole kinase;protein_id=EFD94210.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 27151 28590 . + . ID=gene-HMPREF0889_1333;Name=HMPREF0889_1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1333 GCA_000177555.1|ADGP01000017.1 Genbank CDS 27151 28590 . + 0 ID=cds-EFD94211.1;Parent=gene-HMPREF0889_1333;Dbxref=NCBI_GP:EFD94211.1;Name=EFD94211.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF0889_1333;product=peptidase%2C C69 family;protein_id=EFD94211.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 28968 29081 . + . ID=gene-HMPREF0889_1334;Name=HMPREF0889_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1334 GCA_000177555.1|ADGP01000017.1 Genbank CDS 28968 29081 . + 0 ID=cds-EFD94212.1;Parent=gene-HMPREF0889_1334;Dbxref=NCBI_GP:EFD94212.1;Name=EFD94212.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1334;product=hypothetical protein;protein_id=EFD94212.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 29336 31624 . + . ID=gene-HMPREF0889_1335;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1335 GCA_000177555.1|ADGP01000017.1 Genbank CDS 29336 31624 . + 0 ID=cds-EFD94213.1;Parent=gene-HMPREF0889_1335;Dbxref=NCBI_GP:EFD94213.1;Name=EFD94213.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=HMPREF0889_1335;product=formate C-acetyltransferase;protein_id=EFD94213.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 31685 32524 . + . ID=gene-HMPREF0889_1336;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1336 GCA_000177555.1|ADGP01000017.1 Genbank CDS 31685 32524 . + 0 ID=cds-EFD94214.1;Parent=gene-HMPREF0889_1336;Dbxref=NCBI_GP:EFD94214.1;Name=EFD94214.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF0889_1336;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EFD94214.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 32539 33288 . + . ID=gene-HMPREF0889_1337;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1337 GCA_000177555.1|ADGP01000017.1 Genbank CDS 32539 33288 . + 0 ID=cds-EFD94215.1;Parent=gene-HMPREF0889_1337;Dbxref=NCBI_GP:EFD94215.1;Name=EFD94215.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF0889_1337;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EFD94215.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 33380 33640 . - . ID=gene-HMPREF0889_1338;Name=HMPREF0889_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1338 GCA_000177555.1|ADGP01000017.1 Genbank CDS 33380 33640 . - 0 ID=cds-EFD94216.1;Parent=gene-HMPREF0889_1338;Dbxref=NCBI_GP:EFD94216.1;Name=EFD94216.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1338;product=hypothetical protein;protein_id=EFD94216.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 33788 34441 . - . ID=gene-HMPREF0889_1339;Name=HMPREF0889_1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1339 GCA_000177555.1|ADGP01000017.1 Genbank CDS 33788 34441 . - 0 ID=cds-EFD94217.1;Parent=gene-HMPREF0889_1339;Dbxref=NCBI_GP:EFD94217.1;Name=EFD94217.1;Note=identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065;gbkey=CDS;locus_tag=HMPREF0889_1339;product=hemolysin-3;protein_id=EFD94217.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 34486 34632 . + . ID=gene-HMPREF0889_1340;Name=HMPREF0889_1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1340 GCA_000177555.1|ADGP01000017.1 Genbank CDS 34486 34632 . + 0 ID=cds-EFD94218.1;Parent=gene-HMPREF0889_1340;Dbxref=NCBI_GP:EFD94218.1;Name=EFD94218.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1340;product=hypothetical protein;protein_id=EFD94218.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 34634 36160 . + . ID=gene-HMPREF0889_1341;Name=cobQ;gbkey=Gene;gene=cobQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1341 GCA_000177555.1|ADGP01000017.1 Genbank CDS 34634 36160 . + 0 ID=cds-EFD94219.1;Parent=gene-HMPREF0889_1341;Dbxref=NCBI_GP:EFD94219.1;Name=EFD94219.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313;gbkey=CDS;gene=cobQ;locus_tag=HMPREF0889_1341;product=cobyric acid synthase CobQ;protein_id=EFD94219.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 36163 37116 . + . ID=gene-HMPREF0889_1342;Name=HMPREF0889_1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1342 GCA_000177555.1|ADGP01000017.1 Genbank CDS 36163 37116 . + 0 ID=cds-EFD94220.1;Parent=gene-HMPREF0889_1342;Dbxref=NCBI_GP:EFD94220.1;Name=EFD94220.1;Note=identified by match to protein family HMM PF03186;gbkey=CDS;locus_tag=HMPREF0889_1342;product=CobD/CbiB protein;protein_id=EFD94220.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 37138 38283 . + . ID=gene-HMPREF0889_1343;Name=HMPREF0889_1343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1343 GCA_000177555.1|ADGP01000017.1 Genbank CDS 37138 38283 . + 0 ID=cds-EFD94221.1;Parent=gene-HMPREF0889_1343;Dbxref=NCBI_GP:EFD94221.1;Name=EFD94221.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_1343;product=putative threonine-phosphate decarboxylase;protein_id=EFD94221.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 38495 39826 . + . ID=gene-HMPREF0889_1344;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1344 GCA_000177555.1|ADGP01000017.1 Genbank CDS 38495 39826 . + 0 ID=cds-EFD94222.1;Parent=gene-HMPREF0889_1344;Dbxref=NCBI_GP:EFD94222.1;Name=EFD94222.1;Note=identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ;locus_tag=HMPREF0889_1344;product=branched-chain amino acid transport system II carrier protein;protein_id=EFD94222.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 39895 41298 . + . ID=gene-HMPREF0889_1345;Name=HMPREF0889_1345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1345 GCA_000177555.1|ADGP01000017.1 Genbank CDS 39895 41298 . + 0 ID=cds-EFD94223.1;Parent=gene-HMPREF0889_1345;Dbxref=NCBI_GP:EFD94223.1;Name=EFD94223.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF0889_1345;product=amino acid transporter;protein_id=EFD94223.1;transl_table=11 GCA_000177555.1|ADGP01000017.1 Genbank gene 41517 41908 . + . ID=gene-HMPREF0889_1347;Name=HMPREF0889_1347;end_range=41908,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1347;partial=true GCA_000177555.1|ADGP01000017.1 Genbank CDS 41517 41908 . + 0 ID=cds-EFD94224.1;Parent=gene-HMPREF0889_1347;Dbxref=NCBI_GP:EFD94224.1;Name=EFD94224.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658;end_range=41908,.;gbkey=CDS;locus_tag=HMPREF0889_1347;partial=true;product=hypothetical protein;protein_id=EFD94224.1;transl_table=11 ##sequence-region ADGP01000016.1 1 47207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000016.1 Genbank region 1 47207 . + . ID=ADGP01000016.1:1..47207;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000016.1 Genbank gene 541 1476 . - . ID=gene-HMPREF0889_0450;Name=HMPREF0889_0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0450 GCA_000177555.1|ADGP01000016.1 Genbank CDS 541 1476 . - 0 ID=cds-EFD94225.1;Parent=gene-HMPREF0889_0450;Dbxref=NCBI_GP:EFD94225.1;Name=EFD94225.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF0889_0450;product=hypothetical protein;protein_id=EFD94225.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 1654 2529 . + . ID=gene-HMPREF0889_0451;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0451 GCA_000177555.1|ADGP01000016.1 Genbank CDS 1654 2529 . + 0 ID=cds-EFD94226.1;Parent=gene-HMPREF0889_0451;Dbxref=NCBI_GP:EFD94226.1;Name=EFD94226.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00154;gbkey=CDS;gene=ispE;locus_tag=HMPREF0889_0451;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=EFD94226.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 2522 3250 . + . ID=gene-HMPREF0889_0452;Name=HMPREF0889_0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0452 GCA_000177555.1|ADGP01000016.1 Genbank CDS 2522 3250 . + 0 ID=cds-EFD94227.1;Parent=gene-HMPREF0889_0452;Dbxref=NCBI_GP:EFD94227.1;Name=EFD94227.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF0889_0452;product=FCD domain protein;protein_id=EFD94227.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 3262 3429 . + . ID=gene-HMPREF0889_0453;Name=HMPREF0889_0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0453 GCA_000177555.1|ADGP01000016.1 Genbank CDS 3262 3429 . + 0 ID=cds-EFD94228.1;Parent=gene-HMPREF0889_0453;Dbxref=NCBI_GP:EFD94228.1;Name=EFD94228.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0453;product=hypothetical protein;protein_id=EFD94228.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 3481 4878 . + . ID=gene-HMPREF0889_0454;Name=HMPREF0889_0454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0454 GCA_000177555.1|ADGP01000016.1 Genbank CDS 3481 4878 . + 0 ID=cds-EFD94229.1;Parent=gene-HMPREF0889_0454;Dbxref=NCBI_GP:EFD94229.1;Name=EFD94229.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF0889_0454;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EFD94229.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 4928 5854 . - . ID=gene-HMPREF0889_0455;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0455 GCA_000177555.1|ADGP01000016.1 Genbank CDS 4928 5854 . - 0 ID=cds-EFD94230.1;Parent=gene-HMPREF0889_0455;Dbxref=NCBI_GP:EFD94230.1;Name=EFD94230.1;Note=identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001;gbkey=CDS;gene=metA;locus_tag=HMPREF0889_0455;product=homoserine O-succinyltransferase;protein_id=EFD94230.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 5874 7160 . - . ID=gene-HMPREF0889_0456;Name=HMPREF0889_0456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0456 GCA_000177555.1|ADGP01000016.1 Genbank CDS 5874 7160 . - 0 ID=cds-EFD94231.1;Parent=gene-HMPREF0889_0456;Dbxref=NCBI_GP:EFD94231.1;Name=EFD94231.1;Note=identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01326;gbkey=CDS;locus_tag=HMPREF0889_0456;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=EFD94231.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank sequence_feature 7215 7457 . - . ID=id-ADGP01000016.1:7215..7457;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000016.1 Genbank gene 7646 8077 . + . ID=gene-HMPREF0889_0458;Name=HMPREF0889_0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0458 GCA_000177555.1|ADGP01000016.1 Genbank CDS 7646 8077 . + 0 ID=cds-EFD94232.1;Parent=gene-HMPREF0889_0458;Dbxref=NCBI_GP:EFD94232.1;Name=EFD94232.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0458;product=hypothetical protein;protein_id=EFD94232.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 8161 10098 . - . ID=gene-HMPREF0889_0459;Name=HMPREF0889_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0459 GCA_000177555.1|ADGP01000016.1 Genbank CDS 8161 10098 . - 0 ID=cds-EFD94233.1;Parent=gene-HMPREF0889_0459;Dbxref=NCBI_GP:EFD94233.1;Name=EFD94233.1;Note=identified by match to protein family HMM PF03169%3B match to protein family HMM TIGR00728%3B match to protein family HMM TIGR00733;gbkey=CDS;locus_tag=HMPREF0889_0459;product=oligopeptide transporter%2C OPT family;protein_id=EFD94233.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 10426 11751 . - . ID=gene-HMPREF0889_0460;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0460 GCA_000177555.1|ADGP01000016.1 Genbank CDS 10426 11751 . - 0 ID=cds-EFD94234.1;Parent=gene-HMPREF0889_0460;Dbxref=NCBI_GP:EFD94234.1;Name=EFD94234.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;gene=potE;locus_tag=HMPREF0889_0460;product=putrescine-ornithine antiporter;protein_id=EFD94234.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 11941 13122 . - . ID=gene-HMPREF0889_0461;Name=HMPREF0889_0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0461 GCA_000177555.1|ADGP01000016.1 Genbank CDS 11941 13122 . - 0 ID=cds-EFD94235.1;Parent=gene-HMPREF0889_0461;Dbxref=NCBI_GP:EFD94235.1;Name=EFD94235.1;Note=identified by match to protein family HMM PF00108%3B match to protein family HMM PF02801%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930;gbkey=CDS;locus_tag=HMPREF0889_0461;product=acetyl-CoA C-acetyltransferase;protein_id=EFD94235.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 13391 13546 . + . ID=gene-HMPREF0889_0462;Name=HMPREF0889_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0462 GCA_000177555.1|ADGP01000016.1 Genbank CDS 13391 13546 . + 0 ID=cds-EFD94236.1;Parent=gene-HMPREF0889_0462;Dbxref=NCBI_GP:EFD94236.1;Name=EFD94236.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0462;product=hypothetical protein;protein_id=EFD94236.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank sequence_feature 13639 13749 . + . ID=id-ADGP01000016.1:13639..13749;Note=Ribosomal protein L20 leader;gbkey=misc_feature GCA_000177555.1|ADGP01000016.1 Genbank gene 13813 14277 . + . ID=gene-HMPREF0889_0464;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0464 GCA_000177555.1|ADGP01000016.1 Genbank CDS 13813 14277 . + 0 ID=cds-EFD94237.1;Parent=gene-HMPREF0889_0464;Dbxref=NCBI_GP:EFD94237.1;Name=EFD94237.1;Note=identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;locus_tag=HMPREF0889_0464;product=translation initiation factor IF-3;protein_id=EFD94237.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 14296 14493 . + . ID=gene-HMPREF0889_0465;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=HMPREF0889_0465 GCA_000177555.1|ADGP01000016.1 Genbank CDS 14296 14493 . + 0 ID=cds-EFD94238.1;Parent=gene-HMPREF0889_0465;Dbxref=NCBI_GP:EFD94238.1;Name=EFD94238.1;Note=identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;locus_tag=HMPREF0889_0465;product=ribosomal protein L35;protein_id=EFD94238.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 14534 14884 . + . ID=gene-HMPREF0889_0466;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF0889_0466 GCA_000177555.1|ADGP01000016.1 Genbank CDS 14534 14884 . + 0 ID=cds-EFD94239.1;Parent=gene-HMPREF0889_0466;Dbxref=NCBI_GP:EFD94239.1;Name=EFD94239.1;Note=identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032;gbkey=CDS;gene=rplT;locus_tag=HMPREF0889_0466;product=ribosomal protein L20;protein_id=EFD94239.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 14960 15574 . - . ID=gene-HMPREF0889_0467;Name=HMPREF0889_0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0467 GCA_000177555.1|ADGP01000016.1 Genbank CDS 14960 15574 . - 0 ID=cds-EFD94240.1;Parent=gene-HMPREF0889_0467;Dbxref=NCBI_GP:EFD94240.1;Name=EFD94240.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0467;product=hypothetical protein;protein_id=EFD94240.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 16004 19423 . + . ID=gene-HMPREF0889_0468;Name=HMPREF0889_0468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0468 GCA_000177555.1|ADGP01000016.1 Genbank CDS 16004 19423 . + 0 ID=cds-EFD94241.1;Parent=gene-HMPREF0889_0468;Dbxref=NCBI_GP:EFD94241.1;Name=EFD94241.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_0468;product=Hep/Hag repeat protein;protein_id=EFD94241.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 19653 20351 . + . ID=gene-HMPREF0889_0469;Name=HMPREF0889_0469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0469 GCA_000177555.1|ADGP01000016.1 Genbank CDS 19653 20351 . + 0 ID=cds-EFD94242.1;Parent=gene-HMPREF0889_0469;Dbxref=NCBI_GP:EFD94242.1;Name=EFD94242.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF0889_0469;product=SNARE-like domain protein;protein_id=EFD94242.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 20536 25530 . + . ID=gene-HMPREF0889_0470;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0470 GCA_000177555.1|ADGP01000016.1 Genbank CDS 20536 25530 . + 0 ID=cds-EFD94243.1;Parent=gene-HMPREF0889_0470;Dbxref=NCBI_GP:EFD94243.1;Name=EFD94243.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0470;product=TonB-dependent receptor plug domain protein;protein_id=EFD94243.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 25622 26587 . - . ID=gene-HMPREF0889_0471;Name=HMPREF0889_0471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0471 GCA_000177555.1|ADGP01000016.1 Genbank CDS 25622 26587 . - 0 ID=cds-EFD94244.1;Parent=gene-HMPREF0889_0471;Dbxref=NCBI_GP:EFD94244.1;Name=EFD94244.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0471;product=hypothetical protein;protein_id=EFD94244.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 26822 27310 . + . ID=gene-HMPREF0889_0472;Name=HMPREF0889_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0472 GCA_000177555.1|ADGP01000016.1 Genbank CDS 26822 27310 . + 0 ID=cds-EFD94245.1;Parent=gene-HMPREF0889_0472;Dbxref=NCBI_GP:EFD94245.1;Name=EFD94245.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177;gbkey=CDS;locus_tag=HMPREF0889_0472;product=molybdenum cofactor synthesis domain protein;protein_id=EFD94245.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 27459 28112 . + . ID=gene-HMPREF0889_0473;Name=HMPREF0889_0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0473 GCA_000177555.1|ADGP01000016.1 Genbank CDS 27459 28112 . + 0 ID=cds-EFD94246.1;Parent=gene-HMPREF0889_0473;Dbxref=NCBI_GP:EFD94246.1;Name=EFD94246.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF0889_0473;product=putative alpha-ribazole phosphatase;protein_id=EFD94246.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 28122 28838 . + . ID=gene-HMPREF0889_0474;Name=HMPREF0889_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0474 GCA_000177555.1|ADGP01000016.1 Genbank CDS 28122 28838 . + 0 ID=cds-EFD94247.1;Parent=gene-HMPREF0889_0474;Dbxref=NCBI_GP:EFD94247.1;Name=EFD94247.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;locus_tag=HMPREF0889_0474;product=pseudouridylate synthase;protein_id=EFD94247.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 28900 29961 . + . ID=gene-HMPREF0889_0475;Name=HMPREF0889_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0475 GCA_000177555.1|ADGP01000016.1 Genbank CDS 28900 29961 . + 0 ID=cds-EFD94248.1;Parent=gene-HMPREF0889_0475;Dbxref=NCBI_GP:EFD94248.1;Name=EFD94248.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;locus_tag=HMPREF0889_0475;product=Creatinase;protein_id=EFD94248.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 29976 30533 . + . ID=gene-HMPREF0889_0476;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=HMPREF0889_0476 GCA_000177555.1|ADGP01000016.1 Genbank CDS 29976 30533 . + 0 ID=cds-EFD94249.1;Parent=gene-HMPREF0889_0476;Dbxref=NCBI_GP:EFD94249.1;Name=EFD94249.1;Note=identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038;gbkey=CDS;gene=efp;locus_tag=HMPREF0889_0476;product=translation elongation factor P;protein_id=EFD94249.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 30609 30998 . + . ID=gene-HMPREF0889_0477;Name=HMPREF0889_0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0477 GCA_000177555.1|ADGP01000016.1 Genbank CDS 30609 30998 . + 0 ID=cds-EFD94250.1;Parent=gene-HMPREF0889_0477;Dbxref=NCBI_GP:EFD94250.1;Name=EFD94250.1;Note=identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=HMPREF0889_0477;product=hypothetical protein;protein_id=EFD94250.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 30982 31287 . + . ID=gene-HMPREF0889_0478;Name=HMPREF0889_0478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0478 GCA_000177555.1|ADGP01000016.1 Genbank CDS 30982 31287 . + 0 ID=cds-EFD94251.1;Parent=gene-HMPREF0889_0478;Dbxref=NCBI_GP:EFD94251.1;Name=EFD94251.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0478;product=hypothetical protein;protein_id=EFD94251.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 31297 31722 . + . ID=gene-HMPREF0889_0479;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0479 GCA_000177555.1|ADGP01000016.1 Genbank CDS 31297 31722 . + 0 ID=cds-EFD94252.1;Parent=gene-HMPREF0889_0479;Dbxref=NCBI_GP:EFD94252.1;Name=EFD94252.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;locus_tag=HMPREF0889_0479;product=transcription antitermination factor NusB;protein_id=EFD94252.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 31719 32666 . + . ID=gene-HMPREF0889_0480;Name=HMPREF0889_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0480 GCA_000177555.1|ADGP01000016.1 Genbank CDS 31719 32666 . + 0 ID=cds-EFD94253.1;Parent=gene-HMPREF0889_0480;Dbxref=NCBI_GP:EFD94253.1;Name=EFD94253.1;gbkey=CDS;locus_tag=HMPREF0889_0480;product=metallohydrolase%2C glycoprotease/Kae1 family;protein_id=EFD94253.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 32668 33873 . + . ID=gene-HMPREF0889_0481;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0481 GCA_000177555.1|ADGP01000016.1 Genbank CDS 32668 33873 . + 0 ID=cds-EFD94254.1;Parent=gene-HMPREF0889_0481;Dbxref=NCBI_GP:EFD94254.1;Name=EFD94254.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;locus_tag=HMPREF0889_0481;product=exodeoxyribonuclease VII%2C large subunit;protein_id=EFD94254.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 33860 34108 . + . ID=gene-HMPREF0889_0482;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0482 GCA_000177555.1|ADGP01000016.1 Genbank CDS 33860 34108 . + 0 ID=cds-EFD94255.1;Parent=gene-HMPREF0889_0482;Dbxref=NCBI_GP:EFD94255.1;Name=EFD94255.1;Note=identified by match to protein family HMM PF02609;gbkey=CDS;gene=xseB;locus_tag=HMPREF0889_0482;product=exodeoxyribonuclease VII%2C small subunit;protein_id=EFD94255.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 34095 34982 . + . ID=gene-HMPREF0889_0483;Name=HMPREF0889_0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0483 GCA_000177555.1|ADGP01000016.1 Genbank CDS 34095 34982 . + 0 ID=cds-EFD94256.1;Parent=gene-HMPREF0889_0483;Dbxref=NCBI_GP:EFD94256.1;Name=EFD94256.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;locus_tag=HMPREF0889_0483;product=polyprenyl synthetase;protein_id=EFD94256.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 34999 35796 . + . ID=gene-HMPREF0889_0484;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0484 GCA_000177555.1|ADGP01000016.1 Genbank CDS 34999 35796 . + 0 ID=cds-EFD94257.1;Parent=gene-HMPREF0889_0484;Dbxref=NCBI_GP:EFD94257.1;Name=EFD94257.1;Note=identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478;gbkey=CDS;gene=rrmJ;locus_tag=HMPREF0889_0484;product=ribosomal RNA large subunit methyltransferase J;protein_id=EFD94257.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 35808 36680 . + . ID=gene-HMPREF0889_0485;Name=HMPREF0889_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0485 GCA_000177555.1|ADGP01000016.1 Genbank CDS 35808 36680 . + 0 ID=cds-EFD94258.1;Parent=gene-HMPREF0889_0485;Dbxref=NCBI_GP:EFD94258.1;Name=EFD94258.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;locus_tag=HMPREF0889_0485;product=NAD(+)/NADH kinase;protein_id=EFD94258.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 36682 37254 . + . ID=gene-HMPREF0889_0486;Name=HMPREF0889_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0486 GCA_000177555.1|ADGP01000016.1 Genbank CDS 36682 37254 . + 0 ID=cds-EFD94259.1;Parent=gene-HMPREF0889_0486;Dbxref=NCBI_GP:EFD94259.1;Name=EFD94259.1;Note=identified by match to protein family HMM PF06962;gbkey=CDS;locus_tag=HMPREF0889_0486;product=putative rRNA methylase;protein_id=EFD94259.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 37294 37749 . + . ID=gene-HMPREF0889_0487;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0487 GCA_000177555.1|ADGP01000016.1 Genbank CDS 37294 37749 . + 0 ID=cds-EFD94260.1;Parent=gene-HMPREF0889_0487;Dbxref=NCBI_GP:EFD94260.1;Name=EFD94260.1;Note=identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529;gbkey=CDS;gene=argR;locus_tag=HMPREF0889_0487;product=arginine repressor;protein_id=EFD94260.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 37757 39463 . + . ID=gene-HMPREF0889_0488;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=HMPREF0889_0488 GCA_000177555.1|ADGP01000016.1 Genbank CDS 37757 39463 . + 0 ID=cds-EFD94261.1;Parent=gene-HMPREF0889_0488;Dbxref=NCBI_GP:EFD94261.1;Name=EFD94261.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634;gbkey=CDS;gene=recN;locus_tag=HMPREF0889_0488;product=DNA repair protein RecN;protein_id=EFD94261.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 39530 40327 . + . ID=gene-HMPREF0889_0489;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0489 GCA_000177555.1|ADGP01000016.1 Genbank CDS 39530 40327 . + 0 ID=cds-EFD94262.1;Parent=gene-HMPREF0889_0489;Dbxref=NCBI_GP:EFD94262.1;Name=EFD94262.1;Note=identified by match to protein family HMM PF01113%3B match to protein family HMM PF03447%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036;gbkey=CDS;gene=dapB;locus_tag=HMPREF0889_0489;product=dihydrodipicolinate reductase;protein_id=EFD94262.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 40349 41383 . + . ID=gene-HMPREF0889_0490;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=HMPREF0889_0490 GCA_000177555.1|ADGP01000016.1 Genbank CDS 40349 41383 . + 0 ID=cds-EFD94263.1;Parent=gene-HMPREF0889_0490;Dbxref=NCBI_GP:EFD94263.1;Name=EFD94263.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296;gbkey=CDS;gene=asd;locus_tag=HMPREF0889_0490;product=aspartate-semialdehyde dehydrogenase;protein_id=EFD94263.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 41404 42291 . + . ID=gene-HMPREF0889_0491;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0491 GCA_000177555.1|ADGP01000016.1 Genbank CDS 41404 42291 . + 0 ID=cds-EFD94264.1;Parent=gene-HMPREF0889_0491;Dbxref=NCBI_GP:EFD94264.1;Name=EFD94264.1;Note=identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA;locus_tag=HMPREF0889_0491;product=dihydrodipicolinate synthase;protein_id=EFD94264.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 42396 42653 . + . ID=gene-HMPREF0889_0492;Name=HMPREF0889_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0492 GCA_000177555.1|ADGP01000016.1 Genbank CDS 42396 42653 . + 0 ID=cds-EFD94265.1;Parent=gene-HMPREF0889_0492;Dbxref=NCBI_GP:EFD94265.1;Name=EFD94265.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;locus_tag=HMPREF0889_0492;product=heavy metal-associated domain protein;protein_id=EFD94265.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 42762 43619 . - . ID=gene-HMPREF0889_0493;Name=HMPREF0889_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0493 GCA_000177555.1|ADGP01000016.1 Genbank CDS 42762 43619 . - 0 ID=cds-EFD94266.1;Parent=gene-HMPREF0889_0493;Dbxref=NCBI_GP:EFD94266.1;Name=EFD94266.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF0889_0493;product=transcriptional regulator%2C LysR family;protein_id=EFD94266.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 43765 45018 . + . ID=gene-HMPREF0889_0494;Name=HMPREF0889_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0494 GCA_000177555.1|ADGP01000016.1 Genbank CDS 43765 45018 . + 0 ID=cds-EFD94267.1;Parent=gene-HMPREF0889_0494;Dbxref=NCBI_GP:EFD94267.1;Name=EFD94267.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;locus_tag=HMPREF0889_0494;product=putative diaminopimelate decarboxylase;protein_id=EFD94267.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 45141 45656 . + . ID=gene-HMPREF0889_0495;Name=HMPREF0889_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0495 GCA_000177555.1|ADGP01000016.1 Genbank CDS 45141 45656 . + 0 ID=cds-EFD94268.1;Parent=gene-HMPREF0889_0495;Dbxref=NCBI_GP:EFD94268.1;Name=EFD94268.1;Note=identified by match to protein family HMM PF02829%3B match to protein family HMM PF08279;gbkey=CDS;locus_tag=HMPREF0889_0495;product=HTH domain protein;protein_id=EFD94268.1;transl_table=11 GCA_000177555.1|ADGP01000016.1 Genbank gene 45750 47066 . + . ID=gene-HMPREF0889_0496;Name=HMPREF0889_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0496 GCA_000177555.1|ADGP01000016.1 Genbank CDS 45750 47066 . + 0 ID=cds-EFD94269.1;Parent=gene-HMPREF0889_0496;Dbxref=NCBI_GP:EFD94269.1;Name=EFD94269.1;Note=identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF0889_0496;product=transporter%2C major facilitator family protein;protein_id=EFD94269.1;transl_table=11 ##sequence-region ADGP01000015.1 1 68732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000015.1 Genbank region 1 68732 . + . ID=ADGP01000015.1:1..68732;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000015.1 Genbank gene 1 398 . - . ID=gene-HMPREF0889_0856;Name=HMPREF0889_0856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0856;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000015.1 Genbank CDS 1 398 . - 0 ID=cds-EFD94270.1;Parent=gene-HMPREF0889_0856;Dbxref=NCBI_GP:EFD94270.1;Name=EFD94270.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0856;partial=true;product=hypothetical protein;protein_id=EFD94270.1;start_range=.,1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 678 830 . + . ID=gene-HMPREF0889_0857;Name=HMPREF0889_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0857 GCA_000177555.1|ADGP01000015.1 Genbank CDS 678 830 . + 0 ID=cds-EFD94271.1;Parent=gene-HMPREF0889_0857;Dbxref=NCBI_GP:EFD94271.1;Name=EFD94271.1;gbkey=CDS;locus_tag=HMPREF0889_0857;product=hypothetical protein;protein_id=EFD94271.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 898 4104 . - . ID=gene-HMPREF0889_0858;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0858 GCA_000177555.1|ADGP01000015.1 Genbank CDS 898 4104 . - 0 ID=cds-EFD94272.1;Parent=gene-HMPREF0889_0858;Dbxref=NCBI_GP:EFD94272.1;Name=EFD94272.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR01369;gbkey=CDS;gene=carB;locus_tag=HMPREF0889_0858;product=carbamoyl-phosphate synthase%2C large subunit;protein_id=EFD94272.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 4106 5164 . - . ID=gene-HMPREF0889_0859;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0859 GCA_000177555.1|ADGP01000015.1 Genbank CDS 4106 5164 . - 0 ID=cds-EFD94273.1;Parent=gene-HMPREF0889_0859;Dbxref=NCBI_GP:EFD94273.1;Name=EFD94273.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=CDS;gene=carA;locus_tag=HMPREF0889_0859;product=carbamoyl-phosphate synthase%2C small subunit;protein_id=EFD94273.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 5161 6450 . - . ID=gene-HMPREF0889_0860;Name=HMPREF0889_0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0860 GCA_000177555.1|ADGP01000015.1 Genbank CDS 5161 6450 . - 0 ID=cds-EFD94274.1;Parent=gene-HMPREF0889_0860;Dbxref=NCBI_GP:EFD94274.1;Name=EFD94274.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857;gbkey=CDS;locus_tag=HMPREF0889_0860;product=amidohydrolase family protein;protein_id=EFD94274.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 6434 7375 . - . ID=gene-HMPREF0889_0861;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0861 GCA_000177555.1|ADGP01000015.1 Genbank CDS 6434 7375 . - 0 ID=cds-EFD94275.1;Parent=gene-HMPREF0889_0861;Dbxref=NCBI_GP:EFD94275.1;Name=EFD94275.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670;gbkey=CDS;gene=pyrB;locus_tag=HMPREF0889_0861;product=aspartate carbamoyltransferase;protein_id=EFD94275.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank binding_site 7392 7483 . - . ID=id-ADGP01000015.1:7392..7483;Note=PyrR binding site%3B Rfam score 57.07;bound_moiety=PyrR;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00515 GCA_000177555.1|ADGP01000015.1 Genbank gene 7611 8159 . - . ID=gene-HMPREF0889_0863;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0863 GCA_000177555.1|ADGP01000015.1 Genbank CDS 7611 8159 . - 0 ID=cds-EFD94276.1;Parent=gene-HMPREF0889_0863;Dbxref=NCBI_GP:EFD94276.1;Name=EFD94276.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;gene=pyrR;locus_tag=HMPREF0889_0863;product=phosphoribosyl transferase domain protein;protein_id=EFD94276.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 8172 9089 . - . ID=gene-HMPREF0889_0864;Name=HMPREF0889_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0864 GCA_000177555.1|ADGP01000015.1 Genbank CDS 8172 9089 . - 0 ID=cds-EFD94277.1;Parent=gene-HMPREF0889_0864;Dbxref=NCBI_GP:EFD94277.1;Name=EFD94277.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF0889_0864;product=pseudouridine synthase%2C RluA family;protein_id=EFD94277.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 9099 9536 . - . ID=gene-HMPREF0889_0865;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0865 GCA_000177555.1|ADGP01000015.1 Genbank CDS 9099 9536 . - 0 ID=cds-EFD94278.1;Parent=gene-HMPREF0889_0865;Dbxref=NCBI_GP:EFD94278.1;Name=EFD94278.1;Note=identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077;gbkey=CDS;gene=lspA;locus_tag=HMPREF0889_0865;product=signal peptidase II;protein_id=EFD94278.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 9602 9913 . - . ID=gene-HMPREF0889_0866;Name=HMPREF0889_0866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0866 GCA_000177555.1|ADGP01000015.1 Genbank CDS 9602 9913 . - 0 ID=cds-EFD94279.1;Parent=gene-HMPREF0889_0866;Dbxref=NCBI_GP:EFD94279.1;Name=EFD94279.1;Note=identified by match to protein family HMM PF01910;gbkey=CDS;locus_tag=HMPREF0889_0866;product=hypothetical protein;protein_id=EFD94279.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 10034 10516 . - . ID=gene-HMPREF0889_0867;Name=HMPREF0889_0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0867 GCA_000177555.1|ADGP01000015.1 Genbank CDS 10034 10516 . - 0 ID=cds-EFD94280.1;Parent=gene-HMPREF0889_0867;Dbxref=NCBI_GP:EFD94280.1;Name=EFD94280.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF0889_0867;product=hydrolase%2C NUDIX family;protein_id=EFD94280.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 10513 10956 . - . ID=gene-HMPREF0889_0868;Name=HMPREF0889_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0868 GCA_000177555.1|ADGP01000015.1 Genbank CDS 10513 10956 . - 0 ID=cds-EFD94281.1;Parent=gene-HMPREF0889_0868;Dbxref=NCBI_GP:EFD94281.1;Name=EFD94281.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0868;product=hypothetical protein;protein_id=EFD94281.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 11053 11391 . - . ID=gene-HMPREF0889_0869;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0869 GCA_000177555.1|ADGP01000015.1 Genbank CDS 11053 11391 . - 0 ID=cds-EFD94282.1;Parent=gene-HMPREF0889_0869;Dbxref=NCBI_GP:EFD94282.1;Name=EFD94282.1;Note=identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059;gbkey=CDS;gene=rplQ;locus_tag=HMPREF0889_0869;product=ribosomal protein L17;protein_id=EFD94282.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 11409 12386 . - . ID=gene-HMPREF0889_0870;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0870 GCA_000177555.1|ADGP01000015.1 Genbank CDS 11409 12386 . - 0 ID=cds-EFD94283.1;Parent=gene-HMPREF0889_0870;Dbxref=NCBI_GP:EFD94283.1;Name=EFD94283.1;Note=identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027;gbkey=CDS;gene=rpoA;locus_tag=HMPREF0889_0870;product=DNA-directed RNA polymerase%2C alpha subunit;protein_id=EFD94283.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 12431 12823 . - . ID=gene-HMPREF0889_0871;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0871 GCA_000177555.1|ADGP01000015.1 Genbank CDS 12431 12823 . - 0 ID=cds-EFD94284.1;Parent=gene-HMPREF0889_0871;Dbxref=NCBI_GP:EFD94284.1;Name=EFD94284.1;Note=identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632;gbkey=CDS;gene=rpsK;locus_tag=HMPREF0889_0871;product=30S ribosomal protein S11;protein_id=EFD94284.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 12852 13220 . - . ID=gene-HMPREF0889_0872;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=HMPREF0889_0872 GCA_000177555.1|ADGP01000015.1 Genbank CDS 12852 13220 . - 0 ID=cds-EFD94285.1;Parent=gene-HMPREF0889_0872;Dbxref=NCBI_GP:EFD94285.1;Name=EFD94285.1;Note=identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631;gbkey=CDS;gene=rpsM;locus_tag=HMPREF0889_0872;product=30S ribosomal protein S13;protein_id=EFD94285.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 13243 13356 . - . ID=gene-HMPREF0889_0873;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0873 GCA_000177555.1|ADGP01000015.1 Genbank CDS 13243 13356 . - 0 ID=cds-EFD94286.1;Parent=gene-HMPREF0889_0873;Dbxref=NCBI_GP:EFD94286.1;Name=EFD94286.1;Note=identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022;gbkey=CDS;gene=rpmJ;locus_tag=HMPREF0889_0873;product=ribosomal protein L36;protein_id=EFD94286.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 13381 13599 . - . ID=gene-HMPREF0889_0874;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0874 GCA_000177555.1|ADGP01000015.1 Genbank CDS 13381 13599 . - 0 ID=cds-EFD94287.1;Parent=gene-HMPREF0889_0874;Dbxref=NCBI_GP:EFD94287.1;Name=EFD94287.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008;gbkey=CDS;gene=infA;locus_tag=HMPREF0889_0874;product=translation initiation factor IF-1;protein_id=EFD94287.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 13592 13879 . - . ID=gene-HMPREF0889_0875;Name=HMPREF0889_0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0875 GCA_000177555.1|ADGP01000015.1 Genbank CDS 13592 13879 . - 0 ID=cds-EFD94288.1;Parent=gene-HMPREF0889_0875;Dbxref=NCBI_GP:EFD94288.1;Name=EFD94288.1;gbkey=CDS;locus_tag=HMPREF0889_0875;product=hypothetical protein;protein_id=EFD94288.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 13885 14631 . - . ID=gene-HMPREF0889_0876;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=HMPREF0889_0876 GCA_000177555.1|ADGP01000015.1 Genbank CDS 13885 14631 . - 0 ID=cds-EFD94289.1;Parent=gene-HMPREF0889_0876;Dbxref=NCBI_GP:EFD94289.1;Name=EFD94289.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;locus_tag=HMPREF0889_0876;product=methionine aminopeptidase%2C type I;protein_id=EFD94289.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 14633 15283 . - . ID=gene-HMPREF0889_0877;Name=HMPREF0889_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0877 GCA_000177555.1|ADGP01000015.1 Genbank CDS 14633 15283 . - 0 ID=cds-EFD94290.1;Parent=gene-HMPREF0889_0877;Dbxref=NCBI_GP:EFD94290.1;Name=EFD94290.1;Note=identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351;gbkey=CDS;locus_tag=HMPREF0889_0877;product=adenylate kinase;protein_id=EFD94290.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 15298 16560 . - . ID=gene-HMPREF0889_0878;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF0889_0878 GCA_000177555.1|ADGP01000015.1 Genbank CDS 15298 16560 . - 0 ID=cds-EFD94291.1;Parent=gene-HMPREF0889_0878;Dbxref=NCBI_GP:EFD94291.1;Name=EFD94291.1;Note=identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967;gbkey=CDS;gene=secY;locus_tag=HMPREF0889_0878;product=preprotein translocase%2C SecY subunit;protein_id=EFD94291.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 16562 17002 . - . ID=gene-HMPREF0889_0879;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=HMPREF0889_0879 GCA_000177555.1|ADGP01000015.1 Genbank CDS 16562 17002 . - 0 ID=cds-EFD94292.1;Parent=gene-HMPREF0889_0879;Dbxref=NCBI_GP:EFD94292.1;Name=EFD94292.1;Note=identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071;gbkey=CDS;gene=rplO;locus_tag=HMPREF0889_0879;product=ribosomal protein L15;protein_id=EFD94292.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 17024 17203 . - . ID=gene-HMPREF0889_0880;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0880 GCA_000177555.1|ADGP01000015.1 Genbank CDS 17024 17203 . - 0 ID=cds-EFD94293.1;Parent=gene-HMPREF0889_0880;Dbxref=NCBI_GP:EFD94293.1;Name=EFD94293.1;Note=identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308;gbkey=CDS;gene=rpmD;locus_tag=HMPREF0889_0880;product=ribosomal protein L30;protein_id=EFD94293.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 17221 17721 . - . ID=gene-HMPREF0889_0881;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0881 GCA_000177555.1|ADGP01000015.1 Genbank CDS 17221 17721 . - 0 ID=cds-EFD94294.1;Parent=gene-HMPREF0889_0881;Dbxref=NCBI_GP:EFD94294.1;Name=EFD94294.1;Note=identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021;gbkey=CDS;gene=rpsE;locus_tag=HMPREF0889_0881;product=ribosomal protein S5;protein_id=EFD94294.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 17740 18099 . - . ID=gene-HMPREF0889_0882;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0882 GCA_000177555.1|ADGP01000015.1 Genbank CDS 17740 18099 . - 0 ID=cds-EFD94295.1;Parent=gene-HMPREF0889_0882;Dbxref=NCBI_GP:EFD94295.1;Name=EFD94295.1;Note=identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060;gbkey=CDS;gene=rplR;locus_tag=HMPREF0889_0882;product=ribosomal protein L18;protein_id=EFD94295.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 18134 18676 . - . ID=gene-HMPREF0889_0883;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0883 GCA_000177555.1|ADGP01000015.1 Genbank CDS 18134 18676 . - 0 ID=cds-EFD94296.1;Parent=gene-HMPREF0889_0883;Dbxref=NCBI_GP:EFD94296.1;Name=EFD94296.1;Note=identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654;gbkey=CDS;gene=rplF;locus_tag=HMPREF0889_0883;product=ribosomal protein L6;protein_id=EFD94296.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 18694 19086 . - . ID=gene-HMPREF0889_0884;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=HMPREF0889_0884 GCA_000177555.1|ADGP01000015.1 Genbank CDS 18694 19086 . - 0 ID=cds-EFD94297.1;Parent=gene-HMPREF0889_0884;Dbxref=NCBI_GP:EFD94297.1;Name=EFD94297.1;Note=identified by match to protein family HMM PF00410;gbkey=CDS;gene=rpsH;locus_tag=HMPREF0889_0884;product=ribosomal protein S8;protein_id=EFD94297.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 19116 19385 . - . ID=gene-HMPREF0889_0885;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF0889_0885 GCA_000177555.1|ADGP01000015.1 Genbank CDS 19116 19385 . - 0 ID=cds-EFD94298.1;Parent=gene-HMPREF0889_0885;Dbxref=NCBI_GP:EFD94298.1;Name=EFD94298.1;Note=identified by match to protein family HMM PF00253;gbkey=CDS;gene=rpsN;locus_tag=HMPREF0889_0885;product=ribosomal protein S14p/S29e;protein_id=EFD94298.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 19401 19943 . - . ID=gene-HMPREF0889_0886;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0886 GCA_000177555.1|ADGP01000015.1 Genbank CDS 19401 19943 . - 0 ID=cds-EFD94299.1;Parent=gene-HMPREF0889_0886;Dbxref=NCBI_GP:EFD94299.1;Name=EFD94299.1;Note=identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673;gbkey=CDS;gene=rplE;locus_tag=HMPREF0889_0886;product=ribosomal protein L5;protein_id=EFD94299.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 19966 20283 . - . ID=gene-HMPREF0889_0887;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF0889_0887 GCA_000177555.1|ADGP01000015.1 Genbank CDS 19966 20283 . - 0 ID=cds-EFD94300.1;Parent=gene-HMPREF0889_0887;Dbxref=NCBI_GP:EFD94300.1;Name=EFD94300.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079;gbkey=CDS;gene=rplX;locus_tag=HMPREF0889_0887;product=ribosomal protein L24;protein_id=EFD94300.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 20302 20670 . - . ID=gene-HMPREF0889_0888;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=HMPREF0889_0888 GCA_000177555.1|ADGP01000015.1 Genbank CDS 20302 20670 . - 0 ID=cds-EFD94301.1;Parent=gene-HMPREF0889_0888;Dbxref=NCBI_GP:EFD94301.1;Name=EFD94301.1;Note=identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067;gbkey=CDS;gene=rplN;locus_tag=HMPREF0889_0888;product=ribosomal protein L14;protein_id=EFD94301.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 20697 20951 . - . ID=gene-HMPREF0889_0889;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0889 GCA_000177555.1|ADGP01000015.1 Genbank CDS 20697 20951 . - 0 ID=cds-EFD94302.1;Parent=gene-HMPREF0889_0889;Dbxref=NCBI_GP:EFD94302.1;Name=EFD94302.1;Note=identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635;gbkey=CDS;gene=rpsQ;locus_tag=HMPREF0889_0889;product=30S ribosomal protein S17;protein_id=EFD94302.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 20989 21189 . - . ID=gene-HMPREF0889_0890;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0890 GCA_000177555.1|ADGP01000015.1 Genbank CDS 20989 21189 . - 0 ID=cds-EFD94303.1;Parent=gene-HMPREF0889_0890;Dbxref=NCBI_GP:EFD94303.1;Name=EFD94303.1;Note=identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012;gbkey=CDS;gene=rpmC;locus_tag=HMPREF0889_0890;product=ribosomal protein L29;protein_id=EFD94303.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 21179 21616 . - . ID=gene-HMPREF0889_0891;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0891 GCA_000177555.1|ADGP01000015.1 Genbank CDS 21179 21616 . - 0 ID=cds-EFD94304.1;Parent=gene-HMPREF0889_0891;Dbxref=NCBI_GP:EFD94304.1;Name=EFD94304.1;Note=identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164;gbkey=CDS;gene=rplP;locus_tag=HMPREF0889_0891;product=ribosomal protein L16;protein_id=EFD94304.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 21616 22287 . - . ID=gene-HMPREF0889_0892;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0892 GCA_000177555.1|ADGP01000015.1 Genbank CDS 21616 22287 . - 0 ID=cds-EFD94305.1;Parent=gene-HMPREF0889_0892;Dbxref=NCBI_GP:EFD94305.1;Name=EFD94305.1;Note=identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;locus_tag=HMPREF0889_0892;product=ribosomal protein S3;protein_id=EFD94305.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 22301 22636 . - . ID=gene-HMPREF0889_0893;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HMPREF0889_0893 GCA_000177555.1|ADGP01000015.1 Genbank CDS 22301 22636 . - 0 ID=cds-EFD94306.1;Parent=gene-HMPREF0889_0893;Dbxref=NCBI_GP:EFD94306.1;Name=EFD94306.1;Note=identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044;gbkey=CDS;gene=rplV;locus_tag=HMPREF0889_0893;product=ribosomal protein L22;protein_id=EFD94306.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 22651 22929 . - . ID=gene-HMPREF0889_0894;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0894 GCA_000177555.1|ADGP01000015.1 Genbank CDS 22651 22929 . - 0 ID=cds-EFD94307.1;Parent=gene-HMPREF0889_0894;Dbxref=NCBI_GP:EFD94307.1;Name=EFD94307.1;Note=identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050;gbkey=CDS;gene=rpsS;locus_tag=HMPREF0889_0894;product=ribosomal protein S19;protein_id=EFD94307.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 22952 23779 . - . ID=gene-HMPREF0889_0895;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0895 GCA_000177555.1|ADGP01000015.1 Genbank CDS 22952 23779 . - 0 ID=cds-EFD94308.1;Parent=gene-HMPREF0889_0895;Dbxref=NCBI_GP:EFD94308.1;Name=EFD94308.1;Note=identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171;gbkey=CDS;gene=rplB;locus_tag=HMPREF0889_0895;product=ribosomal protein L2;protein_id=EFD94308.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 23811 24095 . - . ID=gene-HMPREF0889_0896;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HMPREF0889_0896 GCA_000177555.1|ADGP01000015.1 Genbank CDS 23811 24095 . - 0 ID=cds-EFD94309.1;Parent=gene-HMPREF0889_0896;Dbxref=NCBI_GP:EFD94309.1;Name=EFD94309.1;Note=identified by match to protein family HMM PF00276;gbkey=CDS;gene=rplW;locus_tag=HMPREF0889_0896;product=ribosomal protein L23;protein_id=EFD94309.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 24095 24718 . - . ID=gene-HMPREF0889_0897;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0897 GCA_000177555.1|ADGP01000015.1 Genbank CDS 24095 24718 . - 0 ID=cds-EFD94310.1;Parent=gene-HMPREF0889_0897;Dbxref=NCBI_GP:EFD94310.1;Name=EFD94310.1;Note=identified by match to protein family HMM PF00573;gbkey=CDS;gene=rplD;locus_tag=HMPREF0889_0897;product=50S ribosomal protein L4;protein_id=EFD94310.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 24751 25389 . - . ID=gene-HMPREF0889_0898;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0898 GCA_000177555.1|ADGP01000015.1 Genbank CDS 24751 25389 . - 0 ID=cds-EFD94311.1;Parent=gene-HMPREF0889_0898;Dbxref=NCBI_GP:EFD94311.1;Name=EFD94311.1;Note=identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625;gbkey=CDS;gene=rplC;locus_tag=HMPREF0889_0898;product=50S ribosomal protein L3;protein_id=EFD94311.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 25404 25715 . - . ID=gene-HMPREF0889_0899;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0899 GCA_000177555.1|ADGP01000015.1 Genbank CDS 25404 25715 . - 0 ID=cds-EFD94312.1;Parent=gene-HMPREF0889_0899;Dbxref=NCBI_GP:EFD94312.1;Name=EFD94312.1;Note=identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;locus_tag=HMPREF0889_0899;product=ribosomal protein S10;protein_id=EFD94312.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 25871 26014 . + . ID=gene-HMPREF0889_0900;Name=HMPREF0889_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0900 GCA_000177555.1|ADGP01000015.1 Genbank CDS 25871 26014 . + 0 ID=cds-EFD94313.1;Parent=gene-HMPREF0889_0900;Dbxref=NCBI_GP:EFD94313.1;Name=EFD94313.1;gbkey=CDS;locus_tag=HMPREF0889_0900;product=hypothetical protein;protein_id=EFD94313.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 26061 27248 . - . ID=gene-HMPREF0889_0901;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF0889_0901 GCA_000177555.1|ADGP01000015.1 Genbank CDS 26061 27248 . - 0 ID=cds-EFD94314.1;Parent=gene-HMPREF0889_0901;Dbxref=NCBI_GP:EFD94314.1;Name=EFD94314.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=HMPREF0889_0901;product=translation elongation factor Tu;protein_id=EFD94314.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 27281 29353 . - . ID=gene-HMPREF0889_0902;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0902 GCA_000177555.1|ADGP01000015.1 Genbank CDS 27281 29353 . - 0 ID=cds-EFD94315.1;Parent=gene-HMPREF0889_0902;Dbxref=NCBI_GP:EFD94315.1;Name=EFD94315.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF0889_0902;product=translation elongation factor G;protein_id=EFD94315.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 29385 29855 . - . ID=gene-HMPREF0889_0903;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0903 GCA_000177555.1|ADGP01000015.1 Genbank CDS 29385 29855 . - 0 ID=cds-EFD94316.1;Parent=gene-HMPREF0889_0903;Dbxref=NCBI_GP:EFD94316.1;Name=EFD94316.1;Note=identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029;gbkey=CDS;gene=rpsG;locus_tag=HMPREF0889_0903;product=ribosomal protein S7;protein_id=EFD94316.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 29901 30272 . - . ID=gene-HMPREF0889_0904;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=HMPREF0889_0904 GCA_000177555.1|ADGP01000015.1 Genbank CDS 29901 30272 . - 0 ID=cds-EFD94317.1;Parent=gene-HMPREF0889_0904;Dbxref=NCBI_GP:EFD94317.1;Name=EFD94317.1;Note=identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981;gbkey=CDS;gene=rpsL;locus_tag=HMPREF0889_0904;product=ribosomal protein S12;protein_id=EFD94317.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 30351 30596 . - . ID=gene-HMPREF0889_0905;Name=HMPREF0889_0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0905 GCA_000177555.1|ADGP01000015.1 Genbank CDS 30351 30596 . - 0 ID=cds-EFD94318.1;Parent=gene-HMPREF0889_0905;Dbxref=NCBI_GP:EFD94318.1;Name=EFD94318.1;gbkey=CDS;locus_tag=HMPREF0889_0905;product=ribosomal protein L7ae family protein;protein_id=EFD94318.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 30835 35064 . - . ID=gene-HMPREF0889_0906;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0906 GCA_000177555.1|ADGP01000015.1 Genbank CDS 30835 35064 . - 0 ID=cds-EFD94319.1;Parent=gene-HMPREF0889_0906;Dbxref=NCBI_GP:EFD94319.1;Name=EFD94319.1;Note=identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;locus_tag=HMPREF0889_0906;product=DNA-directed RNA polymerase%2C beta' subunit;protein_id=EFD94319.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 35086 38802 . - . ID=gene-HMPREF0889_0907;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0907 GCA_000177555.1|ADGP01000015.1 Genbank CDS 35086 38802 . - 0 ID=cds-EFD94320.1;Parent=gene-HMPREF0889_0907;Dbxref=NCBI_GP:EFD94320.1;Name=EFD94320.1;Note=identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013;gbkey=CDS;gene=rpoB;locus_tag=HMPREF0889_0907;product=DNA-directed RNA polymerase%2C beta subunit;protein_id=EFD94320.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 39012 40268 . - . ID=gene-HMPREF0889_0908;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0908 GCA_000177555.1|ADGP01000015.1 Genbank CDS 39012 40268 . - 0 ID=cds-EFD94321.1;Parent=gene-HMPREF0889_0908;Dbxref=NCBI_GP:EFD94321.1;Name=EFD94321.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS;locus_tag=HMPREF0889_0908;product=tyrosine--tRNA ligase;protein_id=EFD94321.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 40336 42267 . - . ID=gene-HMPREF0889_0909;Name=HMPREF0889_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0909 GCA_000177555.1|ADGP01000015.1 Genbank CDS 40336 42267 . - 0 ID=cds-EFD94322.1;Parent=gene-HMPREF0889_0909;Dbxref=NCBI_GP:EFD94322.1;Name=EFD94322.1;Note=identified by match to protein family HMM PF06874;gbkey=CDS;locus_tag=HMPREF0889_0909;product=firmicute fructose-1%2C6-bisphosphatase;protein_id=EFD94322.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 42284 42400 . - . ID=gene-HMPREF0889_0910;Name=HMPREF0889_0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0910 GCA_000177555.1|ADGP01000015.1 Genbank CDS 42284 42400 . - 0 ID=cds-EFD94323.1;Parent=gene-HMPREF0889_0910;Dbxref=NCBI_GP:EFD94323.1;Name=EFD94323.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0910;product=hypothetical protein;protein_id=EFD94323.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 42459 43697 . - . ID=gene-HMPREF0889_0911;Name=HMPREF0889_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0911 GCA_000177555.1|ADGP01000015.1 Genbank CDS 42459 43697 . - 0 ID=cds-EFD94324.1;Parent=gene-HMPREF0889_0911;Dbxref=NCBI_GP:EFD94324.1;Name=EFD94324.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF0889_0911;product=metallo-beta-lactamase domain protein;protein_id=EFD94324.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 43838 45103 . - . ID=gene-HMPREF0889_0912;Name=HMPREF0889_0912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0912 GCA_000177555.1|ADGP01000015.1 Genbank CDS 43838 45103 . - 0 ID=cds-EFD94325.1;Parent=gene-HMPREF0889_0912;Dbxref=NCBI_GP:EFD94325.1;Name=EFD94325.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0912;product=hypothetical protein;protein_id=EFD94325.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 45128 45784 . - . ID=gene-HMPREF0889_0913;Name=HMPREF0889_0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0913 GCA_000177555.1|ADGP01000015.1 Genbank CDS 45128 45784 . - 0 ID=cds-EFD94326.1;Parent=gene-HMPREF0889_0913;Dbxref=NCBI_GP:EFD94326.1;Name=EFD94326.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0913;product=hypothetical protein;protein_id=EFD94326.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 45781 47481 . - . ID=gene-HMPREF0889_0914;Name=HMPREF0889_0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0914 GCA_000177555.1|ADGP01000015.1 Genbank CDS 45781 47481 . - 0 ID=cds-EFD94327.1;Parent=gene-HMPREF0889_0914;Dbxref=NCBI_GP:EFD94327.1;Name=EFD94327.1;gbkey=CDS;locus_tag=HMPREF0889_0914;product=hypothetical protein;protein_id=EFD94327.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 47697 48143 . - . ID=gene-HMPREF0889_0915;Name=HMPREF0889_0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0915 GCA_000177555.1|ADGP01000015.1 Genbank CDS 47697 48143 . - 0 ID=cds-EFD94328.1;Parent=gene-HMPREF0889_0915;Dbxref=NCBI_GP:EFD94328.1;Name=EFD94328.1;Note=identified by match to protein family HMM PF00582;gbkey=CDS;locus_tag=HMPREF0889_0915;product=universal stress family protein;protein_id=EFD94328.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 48442 49881 . + . ID=gene-HMPREF0889_0916;Name=HMPREF0889_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0916 GCA_000177555.1|ADGP01000015.1 Genbank CDS 48442 49881 . + 0 ID=cds-EFD94329.1;Parent=gene-HMPREF0889_0916;Dbxref=NCBI_GP:EFD94329.1;Name=EFD94329.1;Note=identified by match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF0889_0916;product=citrate transporter;protein_id=EFD94329.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 50146 50221 . - . ID=gene-HMPREF0889_0917;Name=HMPREF0889_0917;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0917 GCA_000177555.1|ADGP01000015.1 Genbank tRNA 50146 50221 . - . ID=rna-HMPREF0889_0917;Parent=gene-HMPREF0889_0917;gbkey=tRNA;locus_tag=HMPREF0889_0917;product=tRNA-Lys GCA_000177555.1|ADGP01000015.1 Genbank exon 50146 50221 . - . ID=exon-HMPREF0889_0917-1;Parent=rna-HMPREF0889_0917;gbkey=tRNA;locus_tag=HMPREF0889_0917;product=tRNA-Lys GCA_000177555.1|ADGP01000015.1 Genbank gene 50225 50299 . - . ID=gene-HMPREF0889_0918;Name=HMPREF0889_0918;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0918 GCA_000177555.1|ADGP01000015.1 Genbank tRNA 50225 50299 . - . ID=rna-HMPREF0889_0918;Parent=gene-HMPREF0889_0918;gbkey=tRNA;locus_tag=HMPREF0889_0918;product=tRNA-Gln GCA_000177555.1|ADGP01000015.1 Genbank exon 50225 50299 . - . ID=exon-HMPREF0889_0918-1;Parent=rna-HMPREF0889_0918;gbkey=tRNA;locus_tag=HMPREF0889_0918;product=tRNA-Gln GCA_000177555.1|ADGP01000015.1 Genbank gene 50300 50377 . - . ID=gene-HMPREF0889_0919;Name=HMPREF0889_0919;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0919 GCA_000177555.1|ADGP01000015.1 Genbank tRNA 50300 50377 . - . ID=rna-HMPREF0889_0919;Parent=gene-HMPREF0889_0919;gbkey=tRNA;locus_tag=HMPREF0889_0919;product=tRNA-His GCA_000177555.1|ADGP01000015.1 Genbank exon 50300 50377 . - . ID=exon-HMPREF0889_0919-1;Parent=rna-HMPREF0889_0919;gbkey=tRNA;locus_tag=HMPREF0889_0919;product=tRNA-His GCA_000177555.1|ADGP01000015.1 Genbank gene 50301 50376 . - . ID=gene-HMPREF0889_0920;Name=HMPREF0889_0920;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0920 GCA_000177555.1|ADGP01000015.1 Genbank tRNA 50301 50376 . - . ID=rna-HMPREF0889_0920;Parent=gene-HMPREF0889_0920;gbkey=tRNA;locus_tag=HMPREF0889_0920;product=tRNA-His GCA_000177555.1|ADGP01000015.1 Genbank exon 50301 50376 . - . ID=exon-HMPREF0889_0920-1;Parent=rna-HMPREF0889_0920;gbkey=tRNA;locus_tag=HMPREF0889_0920;product=tRNA-His GCA_000177555.1|ADGP01000015.1 Genbank gene 50467 51318 . - . ID=gene-HMPREF0889_0921;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0921 GCA_000177555.1|ADGP01000015.1 Genbank CDS 50467 51318 . - 0 ID=cds-EFD94330.1;Parent=gene-HMPREF0889_0921;Dbxref=NCBI_GP:EFD94330.1;Name=EFD94330.1;Note=identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417;gbkey=CDS;gene=speE;locus_tag=HMPREF0889_0921;product=spermidine synthase;protein_id=EFD94330.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 51593 55921 . + . ID=gene-HMPREF0889_0922;Name=HMPREF0889_0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0922 GCA_000177555.1|ADGP01000015.1 Genbank CDS 51593 55921 . + 0 ID=cds-EFD94331.1;Parent=gene-HMPREF0889_0922;Dbxref=NCBI_GP:EFD94331.1;Name=EFD94331.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;locus_tag=HMPREF0889_0922;product=putative CoA-substrate-specific enzyme activase;protein_id=EFD94331.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 56032 57216 . - . ID=gene-HMPREF0889_0923;Name=HMPREF0889_0923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0923 GCA_000177555.1|ADGP01000015.1 Genbank CDS 56032 57216 . - 0 ID=cds-EFD94332.1;Parent=gene-HMPREF0889_0923;Dbxref=NCBI_GP:EFD94332.1;Name=EFD94332.1;Note=identified by match to protein family HMM PF00263;gbkey=CDS;locus_tag=HMPREF0889_0923;product=bacterial type II and III secretion system protein;protein_id=EFD94332.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 57227 57781 . - . ID=gene-HMPREF0889_0924;Name=HMPREF0889_0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0924 GCA_000177555.1|ADGP01000015.1 Genbank CDS 57227 57781 . - 0 ID=cds-EFD94333.1;Parent=gene-HMPREF0889_0924;Dbxref=NCBI_GP:EFD94333.1;Name=EFD94333.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0924;product=hypothetical protein;protein_id=EFD94333.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 57902 58669 . - . ID=gene-HMPREF0889_0925;Name=HMPREF0889_0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0925 GCA_000177555.1|ADGP01000015.1 Genbank CDS 57902 58669 . - 0 ID=cds-EFD94334.1;Parent=gene-HMPREF0889_0925;Dbxref=NCBI_GP:EFD94334.1;Name=EFD94334.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0925;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94334.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 58678 59328 . - . ID=gene-HMPREF0889_0926;Name=HMPREF0889_0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0926 GCA_000177555.1|ADGP01000015.1 Genbank CDS 58678 59328 . - 0 ID=cds-EFD94335.1;Parent=gene-HMPREF0889_0926;Dbxref=NCBI_GP:EFD94335.1;Name=EFD94335.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF0889_0926;product=ABC transporter%2C permease protein;protein_id=EFD94335.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 59359 60159 . - . ID=gene-HMPREF0889_0927;Name=HMPREF0889_0927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0927 GCA_000177555.1|ADGP01000015.1 Genbank CDS 59359 60159 . - 0 ID=cds-EFD94336.1;Parent=gene-HMPREF0889_0927;Dbxref=NCBI_GP:EFD94336.1;Name=EFD94336.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF0889_0927;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EFD94336.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 60308 60811 . - . ID=gene-HMPREF0889_0928;Name=HMPREF0889_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0928 GCA_000177555.1|ADGP01000015.1 Genbank CDS 60308 60811 . - 0 ID=cds-EFD94337.1;Parent=gene-HMPREF0889_0928;Dbxref=NCBI_GP:EFD94337.1;Name=EFD94337.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0928;product=hypothetical protein;protein_id=EFD94337.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 60845 61174 . - . ID=gene-HMPREF0889_0929;Name=HMPREF0889_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0929 GCA_000177555.1|ADGP01000015.1 Genbank CDS 60845 61174 . - 0 ID=cds-EFD94338.1;Parent=gene-HMPREF0889_0929;Dbxref=NCBI_GP:EFD94338.1;Name=EFD94338.1;gbkey=CDS;locus_tag=HMPREF0889_0929;product=hypothetical protein;protein_id=EFD94338.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 61187 62095 . - . ID=gene-HMPREF0889_0930;Name=HMPREF0889_0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0930 GCA_000177555.1|ADGP01000015.1 Genbank CDS 61187 62095 . - 0 ID=cds-EFD94339.1;Parent=gene-HMPREF0889_0930;Dbxref=NCBI_GP:EFD94339.1;Name=EFD94339.1;gbkey=CDS;locus_tag=HMPREF0889_0930;product=hypothetical protein;protein_id=EFD94339.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 62105 63049 . - . ID=gene-HMPREF0889_0931;Name=HMPREF0889_0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0931 GCA_000177555.1|ADGP01000015.1 Genbank CDS 62105 63049 . - 0 ID=cds-EFD94340.1;Parent=gene-HMPREF0889_0931;Dbxref=NCBI_GP:EFD94340.1;Name=EFD94340.1;gbkey=CDS;locus_tag=HMPREF0889_0931;product=hypothetical protein;protein_id=EFD94340.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 63173 64150 . - . ID=gene-HMPREF0889_0932;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0932 GCA_000177555.1|ADGP01000015.1 Genbank CDS 63173 64150 . - 0 ID=cds-EFD94341.1;Parent=gene-HMPREF0889_0932;Dbxref=NCBI_GP:EFD94341.1;Name=EFD94341.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF0889_0932;product=4-phosphoerythronate dehydrogenase;protein_id=EFD94341.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 64302 65603 . - . ID=gene-HMPREF0889_0933;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF0889_0933 GCA_000177555.1|ADGP01000015.1 Genbank CDS 64302 65603 . - 0 ID=cds-EFD94342.1;Parent=gene-HMPREF0889_0933;Dbxref=NCBI_GP:EFD94342.1;Name=EFD94342.1;Note=identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060;gbkey=CDS;gene=eno;locus_tag=HMPREF0889_0933;product=phosphopyruvate hydratase;protein_id=EFD94342.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 65684 66484 . - . ID=gene-HMPREF0889_0934;Name=HMPREF0889_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0934 GCA_000177555.1|ADGP01000015.1 Genbank CDS 65684 66484 . - 0 ID=cds-EFD94343.1;Parent=gene-HMPREF0889_0934;Dbxref=NCBI_GP:EFD94343.1;Name=EFD94343.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0934;product=hypothetical protein;protein_id=EFD94343.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 66668 68014 . + . ID=gene-HMPREF0889_0935;Name=HMPREF0889_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0935 GCA_000177555.1|ADGP01000015.1 Genbank CDS 66668 68014 . + 0 ID=cds-EFD94344.1;Parent=gene-HMPREF0889_0935;Dbxref=NCBI_GP:EFD94344.1;Name=EFD94344.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF0889_0935;product=transporter%2C major facilitator family protein;protein_id=EFD94344.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank gene 68111 68542 . + . ID=gene-HMPREF0889_0936;Name=HMPREF0889_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0936 GCA_000177555.1|ADGP01000015.1 Genbank CDS 68111 68542 . + 0 ID=cds-EFD94345.1;Parent=gene-HMPREF0889_0936;Dbxref=NCBI_GP:EFD94345.1;Name=EFD94345.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0936;product=hypothetical protein;protein_id=EFD94345.1;transl_table=11 GCA_000177555.1|ADGP01000015.1 Genbank binding_site 68604 68704 . + . ID=id-ADGP01000015.1:68604..68704;Note=SAM riboswitch (S box leader)%3B Rfam score 62.52;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162 ##sequence-region ADGP01000014.1 1 32210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000014.1 Genbank region 1 32210 . + . ID=ADGP01000014.1:1..32210;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000014.1 Genbank gene 17 14917 . + . ID=gene-HMPREF0889_1526;Name=HMPREF0889_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1526 GCA_000177555.1|ADGP01000014.1 Genbank CDS 17 14917 . + 0 ID=cds-EFD94346.1;Parent=gene-HMPREF0889_1526;Dbxref=NCBI_GP:EFD94346.1;Name=EFD94346.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF0889_1526;product=hypothetical protein;protein_id=EFD94346.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 15166 16440 . + . ID=gene-HMPREF0889_1527;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1527 GCA_000177555.1|ADGP01000014.1 Genbank CDS 15166 16440 . + 0 ID=cds-EFD94347.1;Parent=gene-HMPREF0889_1527;Dbxref=NCBI_GP:EFD94347.1;Name=EFD94347.1;Note=identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595;gbkey=CDS;gene=cgtA;locus_tag=HMPREF0889_1527;product=Obg family GTPase CgtA;protein_id=EFD94347.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 16458 16751 . + . ID=gene-HMPREF0889_1528;Name=HMPREF0889_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1528 GCA_000177555.1|ADGP01000014.1 Genbank CDS 16458 16751 . + 0 ID=cds-EFD94348.1;Parent=gene-HMPREF0889_1528;Dbxref=NCBI_GP:EFD94348.1;Name=EFD94348.1;Note=identified by match to protein family HMM PF01985;gbkey=CDS;locus_tag=HMPREF0889_1528;product=putative RNA-binding protein%2C YhbY family;protein_id=EFD94348.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 16764 17894 . + . ID=gene-HMPREF0889_1529;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1529 GCA_000177555.1|ADGP01000014.1 Genbank CDS 16764 17894 . + 0 ID=cds-EFD94349.1;Parent=gene-HMPREF0889_1529;Dbxref=NCBI_GP:EFD94349.1;Name=EFD94349.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027;gbkey=CDS;gene=proB;locus_tag=HMPREF0889_1529;product=glutamate 5-kinase;protein_id=EFD94349.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 17909 19156 . + . ID=gene-HMPREF0889_1530;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1530 GCA_000177555.1|ADGP01000014.1 Genbank CDS 17909 19156 . + 0 ID=cds-EFD94350.1;Parent=gene-HMPREF0889_1530;Dbxref=NCBI_GP:EFD94350.1;Name=EFD94350.1;Note=identified by match to protein family HMM TIGR00407;gbkey=CDS;gene=proA;locus_tag=HMPREF0889_1530;product=glutamate-5-semialdehyde dehydrogenase;protein_id=EFD94350.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 19153 19314 . + . ID=gene-HMPREF0889_1531;Name=HMPREF0889_1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1531 GCA_000177555.1|ADGP01000014.1 Genbank CDS 19153 19314 . + 0 ID=cds-EFD94351.1;Parent=gene-HMPREF0889_1531;Dbxref=NCBI_GP:EFD94351.1;Name=EFD94351.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1531;product=hypothetical protein;protein_id=EFD94351.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 19301 19924 . + . ID=gene-HMPREF0889_1532;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1532 GCA_000177555.1|ADGP01000014.1 Genbank CDS 19301 19924 . + 0 ID=cds-EFD94352.1;Parent=gene-HMPREF0889_1532;Dbxref=NCBI_GP:EFD94352.1;Name=EFD94352.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482;gbkey=CDS;gene=nadD;locus_tag=HMPREF0889_1532;product=nicotinate-nucleotide adenylyltransferase;protein_id=EFD94352.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 19900 20505 . + . ID=gene-HMPREF0889_1533;Name=HMPREF0889_1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1533 GCA_000177555.1|ADGP01000014.1 Genbank CDS 19900 20505 . + 0 ID=cds-EFD94353.1;Parent=gene-HMPREF0889_1533;Dbxref=NCBI_GP:EFD94353.1;Name=EFD94353.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00488;gbkey=CDS;locus_tag=HMPREF0889_1533;product=hydrolase%2C HD family;protein_id=EFD94353.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 20502 21656 . + . ID=gene-HMPREF0889_1534;Name=HMPREF0889_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1534 GCA_000177555.1|ADGP01000014.1 Genbank CDS 20502 21656 . + 0 ID=cds-EFD94354.1;Parent=gene-HMPREF0889_1534;Dbxref=NCBI_GP:EFD94354.1;Name=EFD94354.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1534;product=hypothetical protein;protein_id=EFD94354.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 21671 22048 . + . ID=gene-HMPREF0889_1535;Name=HMPREF0889_1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1535 GCA_000177555.1|ADGP01000014.1 Genbank CDS 21671 22048 . + 0 ID=cds-EFD94355.1;Parent=gene-HMPREF0889_1535;Dbxref=NCBI_GP:EFD94355.1;Name=EFD94355.1;Note=identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;locus_tag=HMPREF0889_1535;product=iojap-like protein;protein_id=EFD94355.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 22051 22929 . + . ID=gene-HMPREF0889_1536;Name=HMPREF0889_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1536 GCA_000177555.1|ADGP01000014.1 Genbank CDS 22051 22929 . + 0 ID=cds-EFD94356.1;Parent=gene-HMPREF0889_1536;Dbxref=NCBI_GP:EFD94356.1;Name=EFD94356.1;gbkey=CDS;locus_tag=HMPREF0889_1536;product=hypothetical protein;protein_id=EFD94356.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 23102 24643 . + . ID=gene-HMPREF0889_1537;Name=HMPREF0889_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1537 GCA_000177555.1|ADGP01000014.1 Genbank CDS 23102 24643 . + 0 ID=cds-EFD94357.1;Parent=gene-HMPREF0889_1537;Dbxref=NCBI_GP:EFD94357.1;Name=EFD94357.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1537;product=hypothetical protein;protein_id=EFD94357.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 24647 26743 . + . ID=gene-HMPREF0889_1538;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=HMPREF0889_1538 GCA_000177555.1|ADGP01000014.1 Genbank CDS 24647 26743 . + 0 ID=cds-EFD94358.1;Parent=gene-HMPREF0889_1538;Dbxref=NCBI_GP:EFD94358.1;Name=EFD94358.1;Note=identified by match to protein family HMM PF02503%3B match to protein family HMM TIGR03705;gbkey=CDS;gene=ppk1;locus_tag=HMPREF0889_1538;product=polyphosphate kinase 1;protein_id=EFD94358.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 26931 28193 . - . ID=gene-HMPREF0889_1539;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1539 GCA_000177555.1|ADGP01000014.1 Genbank CDS 26931 28193 . - 0 ID=cds-EFD94359.1;Parent=gene-HMPREF0889_1539;Dbxref=NCBI_GP:EFD94359.1;Name=EFD94359.1;Note=identified by match to protein family HMM PF03616%3B match to protein family HMM TIGR00210;gbkey=CDS;gene=gltS;locus_tag=HMPREF0889_1539;product=sodium/glutamate symporter;protein_id=EFD94359.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 28330 29529 . - . ID=gene-HMPREF0889_1540;Name=HMPREF0889_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1540 GCA_000177555.1|ADGP01000014.1 Genbank CDS 28330 29529 . - 0 ID=cds-EFD94360.1;Parent=gene-HMPREF0889_1540;Dbxref=NCBI_GP:EFD94360.1;Name=EFD94360.1;Note=identified by match to protein family HMM PF05636;gbkey=CDS;locus_tag=HMPREF0889_1540;product=hypothetical protein;protein_id=EFD94360.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 29724 30260 . + . ID=gene-HMPREF0889_1541;Name=HMPREF0889_1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1541 GCA_000177555.1|ADGP01000014.1 Genbank CDS 29724 30260 . + 0 ID=cds-EFD94361.1;Parent=gene-HMPREF0889_1541;Dbxref=NCBI_GP:EFD94361.1;Name=EFD94361.1;gbkey=CDS;locus_tag=HMPREF0889_1541;product=hypothetical protein;protein_id=EFD94361.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 30290 31489 . + . ID=gene-HMPREF0889_1542;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1542 GCA_000177555.1|ADGP01000014.1 Genbank CDS 30290 31489 . + 0 ID=cds-EFD94362.1;Parent=gene-HMPREF0889_1542;Dbxref=NCBI_GP:EFD94362.1;Name=EFD94362.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA;locus_tag=HMPREF0889_1542;product=acetate kinase;protein_id=EFD94362.1;transl_table=11 GCA_000177555.1|ADGP01000014.1 Genbank gene 31523 32210 . + . ID=gene-HMPREF0889_1543;Name=HMPREF0889_1543;end_range=32210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1543;partial=true GCA_000177555.1|ADGP01000014.1 Genbank CDS 31523 32210 . + 0 ID=cds-EFD94363.1;Parent=gene-HMPREF0889_1543;Dbxref=NCBI_GP:EFD94363.1;Name=EFD94363.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00702;end_range=32210,.;gbkey=CDS;locus_tag=HMPREF0889_1543;partial=true;product=haloacid dehalogenase-like hydrolase;protein_id=EFD94363.1;transl_table=11 ##sequence-region ADGP01000013.1 1 73357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000013.1 Genbank region 1 73357 . + . ID=ADGP01000013.1:1..73357;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000013.1 Genbank gene 1 4230 . - . ID=gene-HMPREF0889_1346;Name=HMPREF0889_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1346;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000013.1 Genbank CDS 1 4230 . - 0 ID=cds-EFD94364.1;Parent=gene-HMPREF0889_1346;Dbxref=NCBI_GP:EFD94364.1;Name=EFD94364.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_1346;partial=true;product=Hep/Hag repeat protein;protein_id=EFD94364.1;start_range=.,1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 4352 4528 . - . ID=gene-HMPREF0889_1348;Name=HMPREF0889_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1348 GCA_000177555.1|ADGP01000013.1 Genbank CDS 4352 4528 . - 0 ID=cds-EFD94365.1;Parent=gene-HMPREF0889_1348;Dbxref=NCBI_GP:EFD94365.1;Name=EFD94365.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1348;product=hypothetical protein;protein_id=EFD94365.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 4818 5201 . - . ID=gene-HMPREF0889_1349;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1349 GCA_000177555.1|ADGP01000013.1 Genbank CDS 4818 5201 . - 0 ID=cds-EFD94366.1;Parent=gene-HMPREF0889_1349;Dbxref=NCBI_GP:EFD94366.1;Name=EFD94366.1;Note=identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223;gbkey=CDS;gene=panD;locus_tag=HMPREF0889_1349;product=aspartate 1-decarboxylase;protein_id=EFD94366.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 5204 6058 . - . ID=gene-HMPREF0889_1350;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1350 GCA_000177555.1|ADGP01000013.1 Genbank CDS 5204 6058 . - 0 ID=cds-EFD94367.1;Parent=gene-HMPREF0889_1350;Dbxref=NCBI_GP:EFD94367.1;Name=EFD94367.1;Note=identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018%3B match to protein family HMM TIGR00125;gbkey=CDS;gene=panC;locus_tag=HMPREF0889_1350;product=pantoate--beta-alanine ligase;protein_id=EFD94367.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 6449 8176 . - . ID=gene-HMPREF0889_1351;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1351 GCA_000177555.1|ADGP01000013.1 Genbank CDS 6449 8176 . - 0 ID=cds-EFD94368.1;Parent=gene-HMPREF0889_1351;Dbxref=NCBI_GP:EFD94368.1;Name=EFD94368.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409;gbkey=CDS;gene=proS;locus_tag=HMPREF0889_1351;product=proline--tRNA ligase;protein_id=EFD94368.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 8364 9302 . - . ID=gene-HMPREF0889_1352;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=HMPREF0889_1352 GCA_000177555.1|ADGP01000013.1 Genbank CDS 8364 9302 . - 0 ID=cds-EFD94369.1;Parent=gene-HMPREF0889_1352;Dbxref=NCBI_GP:EFD94369.1;Name=EFD94369.1;Note=identified by match to protein family HMM PF01903%3B match to protein family HMM PF06180;gbkey=CDS;gene=cbiK;locus_tag=HMPREF0889_1352;product=cobalt chelatase (CbiK);protein_id=EFD94369.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 9399 10601 . - . ID=gene-HMPREF0889_1353;Name=hydF;gbkey=Gene;gene=hydF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1353 GCA_000177555.1|ADGP01000013.1 Genbank CDS 9399 10601 . - 0 ID=cds-EFD94370.1;Parent=gene-HMPREF0889_1353;Dbxref=NCBI_GP:EFD94370.1;Name=EFD94370.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231;gbkey=CDS;gene=hydF;locus_tag=HMPREF0889_1353;product=hydrogenase maturation GTPase HydF;protein_id=EFD94370.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 10626 11813 . - . ID=gene-HMPREF0889_1354;Name=HMPREF0889_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1354 GCA_000177555.1|ADGP01000013.1 Genbank CDS 10626 11813 . - 0 ID=cds-EFD94371.1;Parent=gene-HMPREF0889_1354;Dbxref=NCBI_GP:EFD94371.1;Name=EFD94371.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;locus_tag=HMPREF0889_1354;product=oxidoreductase%2C nitrogenase component 1;protein_id=EFD94371.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 11804 13129 . - . ID=gene-HMPREF0889_1355;Name=HMPREF0889_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1355 GCA_000177555.1|ADGP01000013.1 Genbank CDS 11804 13129 . - 0 ID=cds-EFD94372.1;Parent=gene-HMPREF0889_1355;Dbxref=NCBI_GP:EFD94372.1;Name=EFD94372.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1355;product=hypothetical protein;protein_id=EFD94372.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 13134 13889 . - . ID=gene-HMPREF0889_1356;Name=nifH;gbkey=Gene;gene=nifH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1356 GCA_000177555.1|ADGP01000013.1 Genbank CDS 13134 13889 . - 0 ID=cds-EFD94373.1;Parent=gene-HMPREF0889_1356;Dbxref=NCBI_GP:EFD94373.1;Name=EFD94373.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;gene=nifH;locus_tag=HMPREF0889_1356;product=putative nitrogenase iron protein;protein_id=EFD94373.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 13926 14930 . - . ID=gene-HMPREF0889_1357;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1357 GCA_000177555.1|ADGP01000013.1 Genbank CDS 13926 14930 . - 0 ID=cds-EFD94374.1;Parent=gene-HMPREF0889_1357;Dbxref=NCBI_GP:EFD94374.1;Name=EFD94374.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124;gbkey=CDS;gene=hypE;locus_tag=HMPREF0889_1357;product=hydrogenase expression/formation protein HypE;protein_id=EFD94374.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 14927 15982 . - . ID=gene-HMPREF0889_1358;Name=HMPREF0889_1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1358 GCA_000177555.1|ADGP01000013.1 Genbank CDS 14927 15982 . - 0 ID=cds-EFD94375.1;Parent=gene-HMPREF0889_1358;Dbxref=NCBI_GP:EFD94375.1;Name=EFD94375.1;Note=identified by match to protein family HMM PF01924;gbkey=CDS;locus_tag=HMPREF0889_1358;product=hydrogenase formation hypA family;protein_id=EFD94375.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 15984 16190 . - . ID=gene-HMPREF0889_1359;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1359 GCA_000177555.1|ADGP01000013.1 Genbank CDS 15984 16190 . - 0 ID=cds-EFD94376.1;Parent=gene-HMPREF0889_1359;Dbxref=NCBI_GP:EFD94376.1;Name=EFD94376.1;Note=identified by match to protein family HMM PF01455%3B match to protein family HMM TIGR00074;gbkey=CDS;gene=hypC;locus_tag=HMPREF0889_1359;product=hydrogenase assembly chaperone HypC/HupF;protein_id=EFD94376.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 16277 18574 . - . ID=gene-HMPREF0889_1360;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1360 GCA_000177555.1|ADGP01000013.1 Genbank CDS 16277 18574 . - 0 ID=cds-EFD94377.1;Parent=gene-HMPREF0889_1360;Dbxref=NCBI_GP:EFD94377.1;Name=EFD94377.1;Note=identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143;gbkey=CDS;gene=hypF;locus_tag=HMPREF0889_1360;product=carbamoyltransferase HypF;protein_id=EFD94377.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 18577 19608 . - . ID=gene-HMPREF0889_1361;Name=HMPREF0889_1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1361 GCA_000177555.1|ADGP01000013.1 Genbank CDS 18577 19608 . - 0 ID=cds-EFD94378.1;Parent=gene-HMPREF0889_1361;Dbxref=NCBI_GP:EFD94378.1;Name=EFD94378.1;gbkey=CDS;locus_tag=HMPREF0889_1361;product=hypothetical protein;protein_id=EFD94378.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 19605 20909 . - . ID=gene-HMPREF0889_1362;Name=HMPREF0889_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1362 GCA_000177555.1|ADGP01000013.1 Genbank CDS 19605 20909 . - 0 ID=cds-EFD94379.1;Parent=gene-HMPREF0889_1362;Dbxref=NCBI_GP:EFD94379.1;Name=EFD94379.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;locus_tag=HMPREF0889_1362;product=oxidoreductase%2C nitrogenase component 1;protein_id=EFD94379.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 20909 21661 . - . ID=gene-HMPREF0889_1363;Name=nifH;gbkey=Gene;gene=nifH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1363 GCA_000177555.1|ADGP01000013.1 Genbank CDS 20909 21661 . - 0 ID=cds-EFD94380.1;Parent=gene-HMPREF0889_1363;Dbxref=NCBI_GP:EFD94380.1;Name=EFD94380.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;gene=nifH;locus_tag=HMPREF0889_1363;product=putative nitrogenase iron protein;protein_id=EFD94380.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 21670 21921 . - . ID=gene-HMPREF0889_1364;Name=HMPREF0889_1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1364 GCA_000177555.1|ADGP01000013.1 Genbank CDS 21670 21921 . - 0 ID=cds-EFD94381.1;Parent=gene-HMPREF0889_1364;Dbxref=NCBI_GP:EFD94381.1;Name=EFD94381.1;gbkey=CDS;locus_tag=HMPREF0889_1364;product=putative iron-only hydrogenase system regulator;protein_id=EFD94381.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 22099 23367 . - . ID=gene-HMPREF0889_1365;Name=gltT;gbkey=Gene;gene=gltT;gene_biotype=protein_coding;locus_tag=HMPREF0889_1365 GCA_000177555.1|ADGP01000013.1 Genbank CDS 22099 23367 . - 0 ID=cds-EFD94382.1;Parent=gene-HMPREF0889_1365;Dbxref=NCBI_GP:EFD94382.1;Name=EFD94382.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;gene=gltT;locus_tag=HMPREF0889_1365;product=proton/sodium-glutamate symport protein GltT;protein_id=EFD94382.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 23560 23763 . + . ID=gene-HMPREF0889_1366;Name=HMPREF0889_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1366 GCA_000177555.1|ADGP01000013.1 Genbank CDS 23560 23763 . + 0 ID=cds-EFD94383.1;Parent=gene-HMPREF0889_1366;Dbxref=NCBI_GP:EFD94383.1;Name=EFD94383.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1366;product=hypothetical protein;protein_id=EFD94383.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 23853 24827 . - . ID=gene-HMPREF0889_1367;Name=HMPREF0889_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1367 GCA_000177555.1|ADGP01000013.1 Genbank CDS 23853 24827 . - 0 ID=cds-EFD94384.1;Parent=gene-HMPREF0889_1367;Dbxref=NCBI_GP:EFD94384.1;Name=EFD94384.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1367;product=hypothetical protein;protein_id=EFD94384.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 24878 26041 . - . ID=gene-HMPREF0889_1368;Name=HMPREF0889_1368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1368 GCA_000177555.1|ADGP01000013.1 Genbank CDS 24878 26041 . - 0 ID=cds-EFD94385.1;Parent=gene-HMPREF0889_1368;Dbxref=NCBI_GP:EFD94385.1;Name=EFD94385.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1368;product=hypothetical protein;protein_id=EFD94385.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 26119 27039 . - . ID=gene-HMPREF0889_1369;Name=HMPREF0889_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1369 GCA_000177555.1|ADGP01000013.1 Genbank CDS 26119 27039 . - 0 ID=cds-EFD94386.1;Parent=gene-HMPREF0889_1369;Dbxref=NCBI_GP:EFD94386.1;Name=EFD94386.1;gbkey=CDS;locus_tag=HMPREF0889_1369;product=hypothetical protein;protein_id=EFD94386.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 27049 27657 . - . ID=gene-HMPREF0889_1370;Name=HMPREF0889_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1370 GCA_000177555.1|ADGP01000013.1 Genbank CDS 27049 27657 . - 0 ID=cds-EFD94387.1;Parent=gene-HMPREF0889_1370;Dbxref=NCBI_GP:EFD94387.1;Name=EFD94387.1;Note=identified by match to protein family HMM PF02245%3B match to protein family HMM TIGR00567;gbkey=CDS;locus_tag=HMPREF0889_1370;product=3-methyladenine DNA glycosylase;protein_id=EFD94387.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 27661 28398 . - . ID=gene-HMPREF0889_1371;Name=HMPREF0889_1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1371 GCA_000177555.1|ADGP01000013.1 Genbank CDS 27661 28398 . - 0 ID=cds-EFD94388.1;Parent=gene-HMPREF0889_1371;Dbxref=NCBI_GP:EFD94388.1;Name=EFD94388.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF0889_1371;product=IclR helix-turn-helix domain protein;protein_id=EFD94388.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 28420 29499 . - . ID=gene-HMPREF0889_1372;Name=HMPREF0889_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1372 GCA_000177555.1|ADGP01000013.1 Genbank CDS 28420 29499 . - 0 ID=cds-EFD94389.1;Parent=gene-HMPREF0889_1372;Dbxref=NCBI_GP:EFD94389.1;Name=EFD94389.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF0889_1372;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EFD94389.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 29519 29767 . - . ID=gene-HMPREF0889_1373;Name=bofA;gbkey=Gene;gene=bofA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1373 GCA_000177555.1|ADGP01000013.1 Genbank CDS 29519 29767 . - 0 ID=cds-EFD94390.1;Parent=gene-HMPREF0889_1373;Dbxref=NCBI_GP:EFD94390.1;Name=EFD94390.1;gbkey=CDS;gene=bofA;locus_tag=HMPREF0889_1373;product=pro-sigmaK processing inhibitor BofA;protein_id=EFD94390.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 29778 30368 . - . ID=gene-HMPREF0889_1374;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF0889_1374 GCA_000177555.1|ADGP01000013.1 Genbank CDS 29778 30368 . - 0 ID=cds-EFD94391.1;Parent=gene-HMPREF0889_1374;Dbxref=NCBI_GP:EFD94391.1;Name=EFD94391.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615;gbkey=CDS;gene=recR;locus_tag=HMPREF0889_1374;product=recombination protein RecR;protein_id=EFD94391.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 30368 30685 . - . ID=gene-HMPREF0889_1375;Name=HMPREF0889_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1375 GCA_000177555.1|ADGP01000013.1 Genbank CDS 30368 30685 . - 0 ID=cds-EFD94392.1;Parent=gene-HMPREF0889_1375;Dbxref=NCBI_GP:EFD94392.1;Name=EFD94392.1;Note=identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;locus_tag=HMPREF0889_1375;product=DNA-binding protein%2C YbaB/EbfC family;protein_id=EFD94392.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 30704 30868 . - . ID=gene-HMPREF0889_1376;Name=HMPREF0889_1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1376 GCA_000177555.1|ADGP01000013.1 Genbank CDS 30704 30868 . - 0 ID=cds-EFD94393.1;Parent=gene-HMPREF0889_1376;Dbxref=NCBI_GP:EFD94393.1;Name=EFD94393.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1376;product=hypothetical protein;protein_id=EFD94393.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 30892 32589 . - . ID=gene-HMPREF0889_1377;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=HMPREF0889_1377 GCA_000177555.1|ADGP01000013.1 Genbank CDS 30892 32589 . - 0 ID=cds-EFD94394.1;Parent=gene-HMPREF0889_1377;Dbxref=NCBI_GP:EFD94394.1;Name=EFD94394.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397;gbkey=CDS;gene=dnaX;locus_tag=HMPREF0889_1377;product=DNA polymerase III%2C subunit gamma and tau;protein_id=EFD94394.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 32662 32764 . - . ID=gene-HMPREF0889_1378;Name=srpB;gbkey=Gene;gene=srpB;gene_biotype=SRP_RNA;locus_tag=HMPREF0889_1378 GCA_000177555.1|ADGP01000013.1 Genbank SRP_RNA 32662 32764 . - . ID=rna-HMPREF0889_1378;Parent=gene-HMPREF0889_1378;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF0889_1378;product=Bacterial signal recognition particle RNA GCA_000177555.1|ADGP01000013.1 Genbank exon 32662 32764 . - . ID=exon-HMPREF0889_1378-1;Parent=rna-HMPREF0889_1378;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF0889_1378;product=Bacterial signal recognition particle RNA GCA_000177555.1|ADGP01000013.1 Genbank gene 32911 34230 . - . ID=gene-HMPREF0889_1379;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=HMPREF0889_1379 GCA_000177555.1|ADGP01000013.1 Genbank CDS 32911 34230 . - 0 ID=cds-EFD94395.1;Parent=gene-HMPREF0889_1379;Dbxref=NCBI_GP:EFD94395.1;Name=EFD94395.1;gbkey=CDS;gene=stp;locus_tag=HMPREF0889_1379;product=serine transporter;protein_id=EFD94395.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 34446 35285 . - . ID=gene-HMPREF0889_1380;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1380 GCA_000177555.1|ADGP01000013.1 Genbank CDS 34446 35285 . - 0 ID=cds-EFD94396.1;Parent=gene-HMPREF0889_1380;Dbxref=NCBI_GP:EFD94396.1;Name=EFD94396.1;Note=identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652;gbkey=CDS;gene=dapF;locus_tag=HMPREF0889_1380;product=diaminopimelate epimerase;protein_id=EFD94396.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 35413 36255 . + . ID=gene-HMPREF0889_1381;Name=HMPREF0889_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1381 GCA_000177555.1|ADGP01000013.1 Genbank CDS 35413 36255 . + 0 ID=cds-EFD94397.1;Parent=gene-HMPREF0889_1381;Dbxref=NCBI_GP:EFD94397.1;Name=EFD94397.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;locus_tag=HMPREF0889_1381;product=transcriptional regulator%2C AraC family;protein_id=EFD94397.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 36321 37088 . - . ID=gene-HMPREF0889_1382;Name=HMPREF0889_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1382 GCA_000177555.1|ADGP01000013.1 Genbank CDS 36321 37088 . - 0 ID=cds-EFD94398.1;Parent=gene-HMPREF0889_1382;Dbxref=NCBI_GP:EFD94398.1;Name=EFD94398.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1382;product=hypothetical protein;protein_id=EFD94398.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 37234 39534 . - . ID=gene-HMPREF0889_1383;Name=HMPREF0889_1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1383 GCA_000177555.1|ADGP01000013.1 Genbank CDS 37234 39534 . - 0 ID=cds-EFD94399.1;Parent=gene-HMPREF0889_1383;Dbxref=NCBI_GP:EFD94399.1;Name=EFD94399.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694;gbkey=CDS;locus_tag=HMPREF0889_1383;product=aconitase domain protein;protein_id=EFD94399.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 39819 41162 . + . ID=gene-HMPREF0889_1384;Name=HMPREF0889_1384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1384 GCA_000177555.1|ADGP01000013.1 Genbank CDS 39819 41162 . + 0 ID=cds-EFD94400.1;Parent=gene-HMPREF0889_1384;Dbxref=NCBI_GP:EFD94400.1;Name=EFD94400.1;Note=identified by match to protein family HMM PF00285;gbkey=CDS;locus_tag=HMPREF0889_1384;product=citrate (Si)-synthase;protein_id=EFD94400.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 41162 42160 . + . ID=gene-HMPREF0889_1385;Name=HMPREF0889_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1385 GCA_000177555.1|ADGP01000013.1 Genbank CDS 41162 42160 . + 0 ID=cds-EFD94401.1;Parent=gene-HMPREF0889_1385;Dbxref=NCBI_GP:EFD94401.1;Name=EFD94401.1;Note=identified by match to protein family HMM PF00180;gbkey=CDS;locus_tag=HMPREF0889_1385;product=putative isocitrate dehydrogenase%2C NAD-dependent;protein_id=EFD94401.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 42205 43002 . - . ID=gene-HMPREF0889_1386;Name=HMPREF0889_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1386 GCA_000177555.1|ADGP01000013.1 Genbank CDS 42205 43002 . - 0 ID=cds-EFD94402.1;Parent=gene-HMPREF0889_1386;Dbxref=NCBI_GP:EFD94402.1;Name=EFD94402.1;Note=identified by match to protein family HMM PF02409;gbkey=CDS;locus_tag=HMPREF0889_1386;product=O-methyltransferase domain protein;protein_id=EFD94402.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 43098 43535 . - . ID=gene-HMPREF0889_1387;Name=dps1;gbkey=Gene;gene=dps1;gene_biotype=protein_coding;locus_tag=HMPREF0889_1387 GCA_000177555.1|ADGP01000013.1 Genbank CDS 43098 43535 . - 0 ID=cds-EFD94403.1;Parent=gene-HMPREF0889_1387;Dbxref=NCBI_GP:EFD94403.1;Name=EFD94403.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;gene=dps1;locus_tag=HMPREF0889_1387;product=DNA protection during starvation protein 1;protein_id=EFD94403.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 43692 44147 . - . ID=gene-HMPREF0889_1388;Name=HMPREF0889_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1388 GCA_000177555.1|ADGP01000013.1 Genbank CDS 43692 44147 . - 0 ID=cds-EFD94404.1;Parent=gene-HMPREF0889_1388;Dbxref=NCBI_GP:EFD94404.1;Name=EFD94404.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF0889_1388;product=transporter associated domain protein;protein_id=EFD94404.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 44207 45055 . - . ID=gene-HMPREF0889_1389;Name=HMPREF0889_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1389 GCA_000177555.1|ADGP01000013.1 Genbank CDS 44207 45055 . - 0 ID=cds-EFD94405.1;Parent=gene-HMPREF0889_1389;Dbxref=NCBI_GP:EFD94405.1;Name=EFD94405.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01595;gbkey=CDS;locus_tag=HMPREF0889_1389;product=hypothetical protein;protein_id=EFD94405.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 45166 47088 . - . ID=gene-HMPREF0889_1390;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1390 GCA_000177555.1|ADGP01000013.1 Genbank CDS 45166 47088 . - 0 ID=cds-EFD94406.1;Parent=gene-HMPREF0889_1390;Dbxref=NCBI_GP:EFD94406.1;Name=EFD94406.1;Note=identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;locus_tag=HMPREF0889_1390;product=DNA gyrase%2C B subunit;protein_id=EFD94406.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 47157 47417 . - . ID=gene-HMPREF0889_1391;Name=HMPREF0889_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1391 GCA_000177555.1|ADGP01000013.1 Genbank CDS 47157 47417 . - 0 ID=cds-EFD94407.1;Parent=gene-HMPREF0889_1391;Dbxref=NCBI_GP:EFD94407.1;Name=EFD94407.1;gbkey=CDS;locus_tag=HMPREF0889_1391;product=hypothetical protein;protein_id=EFD94407.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 47420 48313 . - . ID=gene-HMPREF0889_1392;Name=HMPREF0889_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1392 GCA_000177555.1|ADGP01000013.1 Genbank CDS 47420 48313 . - 0 ID=cds-EFD94408.1;Parent=gene-HMPREF0889_1392;Dbxref=NCBI_GP:EFD94408.1;Name=EFD94408.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1392;product=hypothetical protein;protein_id=EFD94408.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 48303 49406 . - . ID=gene-HMPREF0889_1393;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=HMPREF0889_1393 GCA_000177555.1|ADGP01000013.1 Genbank CDS 48303 49406 . - 0 ID=cds-EFD94409.1;Parent=gene-HMPREF0889_1393;Dbxref=NCBI_GP:EFD94409.1;Name=EFD94409.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611;gbkey=CDS;gene=recF;locus_tag=HMPREF0889_1393;product=DNA replication and repair protein RecF;protein_id=EFD94409.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 49403 49624 . - . ID=gene-HMPREF0889_1394;Name=HMPREF0889_1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1394 GCA_000177555.1|ADGP01000013.1 Genbank CDS 49403 49624 . - 0 ID=cds-EFD94410.1;Parent=gene-HMPREF0889_1394;Dbxref=NCBI_GP:EFD94410.1;Name=EFD94410.1;gbkey=CDS;locus_tag=HMPREF0889_1394;product=S4 domain family protein;protein_id=EFD94410.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 49624 50739 . - . ID=gene-HMPREF0889_1395;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=HMPREF0889_1395 GCA_000177555.1|ADGP01000013.1 Genbank CDS 49624 50739 . - 0 ID=cds-EFD94411.1;Parent=gene-HMPREF0889_1395;Dbxref=NCBI_GP:EFD94411.1;Name=EFD94411.1;Note=identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;locus_tag=HMPREF0889_1395;product=DNA polymerase III%2C beta subunit;protein_id=EFD94411.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 50965 52461 . - . ID=gene-HMPREF0889_1396;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1396 GCA_000177555.1|ADGP01000013.1 Genbank CDS 50965 52461 . - 0 ID=cds-EFD94412.1;Parent=gene-HMPREF0889_1396;Dbxref=NCBI_GP:EFD94412.1;Name=EFD94412.1;Note=identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362;gbkey=CDS;gene=dnaA;locus_tag=HMPREF0889_1396;product=chromosomal replication initiator protein DnaA;protein_id=EFD94412.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 52955 53089 . + . ID=gene-HMPREF0889_1397;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1397 GCA_000177555.1|ADGP01000013.1 Genbank CDS 52955 53089 . + 0 ID=cds-EFD94413.1;Parent=gene-HMPREF0889_1397;Dbxref=NCBI_GP:EFD94413.1;Name=EFD94413.1;Note=identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030;gbkey=CDS;gene=rpmH;locus_tag=HMPREF0889_1397;product=ribosomal protein L34;protein_id=EFD94413.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 53164 53520 . + . ID=gene-HMPREF0889_1398;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1398 GCA_000177555.1|ADGP01000013.1 Genbank CDS 53164 53520 . + 0 ID=cds-EFD94414.1;Parent=gene-HMPREF0889_1398;Dbxref=NCBI_GP:EFD94414.1;Name=EFD94414.1;Note=identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188;gbkey=CDS;gene=rnpA;locus_tag=HMPREF0889_1398;product=ribonuclease P protein component;protein_id=EFD94414.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 53524 53733 . + . ID=gene-HMPREF0889_1399;Name=HMPREF0889_1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1399 GCA_000177555.1|ADGP01000013.1 Genbank CDS 53524 53733 . + 0 ID=cds-EFD94415.1;Parent=gene-HMPREF0889_1399;Dbxref=NCBI_GP:EFD94415.1;Name=EFD94415.1;Note=identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;locus_tag=HMPREF0889_1399;product=conserved hypothetical protein YidD;protein_id=EFD94415.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 53790 54461 . + . ID=gene-HMPREF0889_1400;Name=HMPREF0889_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1400 GCA_000177555.1|ADGP01000013.1 Genbank CDS 53790 54461 . + 0 ID=cds-EFD94416.1;Parent=gene-HMPREF0889_1400;Dbxref=NCBI_GP:EFD94416.1;Name=EFD94416.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592;gbkey=CDS;locus_tag=HMPREF0889_1400;product=membrane protein insertase%2C YidC/Oxa1 family;protein_id=EFD94416.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 54464 55213 . + . ID=gene-HMPREF0889_1401;Name=HMPREF0889_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1401 GCA_000177555.1|ADGP01000013.1 Genbank CDS 54464 55213 . + 0 ID=cds-EFD94417.1;Parent=gene-HMPREF0889_1401;Dbxref=NCBI_GP:EFD94417.1;Name=EFD94417.1;Note=identified by match to protein family HMM PF01424;gbkey=CDS;locus_tag=HMPREF0889_1401;product=R3H domain protein;protein_id=EFD94417.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 55272 56651 . + . ID=gene-HMPREF0889_1402;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1402 GCA_000177555.1|ADGP01000013.1 Genbank CDS 55272 56651 . + 0 ID=cds-EFD94418.1;Parent=gene-HMPREF0889_1402;Dbxref=NCBI_GP:EFD94418.1;Name=EFD94418.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450;gbkey=CDS;gene=trmE;locus_tag=HMPREF0889_1402;product=tRNA modification GTPase TrmE;protein_id=EFD94418.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 56668 58557 . + . ID=gene-HMPREF0889_1403;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1403 GCA_000177555.1|ADGP01000013.1 Genbank CDS 56668 58557 . + 0 ID=cds-EFD94419.1;Parent=gene-HMPREF0889_1403;Dbxref=NCBI_GP:EFD94419.1;Name=EFD94419.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136;gbkey=CDS;gene=gidA;locus_tag=HMPREF0889_1403;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=EFD94419.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 58544 59257 . + . ID=gene-HMPREF0889_1404;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1404 GCA_000177555.1|ADGP01000013.1 Genbank CDS 58544 59257 . + 0 ID=cds-EFD94420.1;Parent=gene-HMPREF0889_1404;Dbxref=NCBI_GP:EFD94420.1;Name=EFD94420.1;Note=identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138;gbkey=CDS;gene=gidB;locus_tag=HMPREF0889_1404;product=16S rRNA methyltransferase GidB;protein_id=EFD94420.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 59370 60026 . + . ID=gene-HMPREF0889_1405;Name=HMPREF0889_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1405 GCA_000177555.1|ADGP01000013.1 Genbank CDS 59370 60026 . + 0 ID=cds-EFD94421.1;Parent=gene-HMPREF0889_1405;Dbxref=NCBI_GP:EFD94421.1;Name=EFD94421.1;Note=identified by match to protein family HMM PF08348;gbkey=CDS;locus_tag=HMPREF0889_1405;product=YheO-like protein;protein_id=EFD94421.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 60056 61351 . + . ID=gene-HMPREF0889_1406;Name=HMPREF0889_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1406 GCA_000177555.1|ADGP01000013.1 Genbank CDS 60056 61351 . + 0 ID=cds-EFD94422.1;Parent=gene-HMPREF0889_1406;Dbxref=NCBI_GP:EFD94422.1;Name=EFD94422.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;locus_tag=HMPREF0889_1406;product=hypothetical protein;protein_id=EFD94422.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 61522 61707 . + . ID=gene-HMPREF0889_1407;Name=HMPREF0889_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1407 GCA_000177555.1|ADGP01000013.1 Genbank CDS 61522 61707 . + 0 ID=cds-EFD94423.1;Parent=gene-HMPREF0889_1407;Dbxref=NCBI_GP:EFD94423.1;Name=EFD94423.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1407;product=hypothetical protein;protein_id=EFD94423.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 61975 62934 . + . ID=gene-HMPREF0889_1408;Name=HMPREF0889_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1408 GCA_000177555.1|ADGP01000013.1 Genbank CDS 61975 62934 . + 0 ID=cds-EFD94424.1;Parent=gene-HMPREF0889_1408;Dbxref=NCBI_GP:EFD94424.1;Name=EFD94424.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF0889_1408;product=lactate/malate dehydrogenase%2C NAD binding domain protein;protein_id=EFD94424.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 62962 63984 . + . ID=gene-HMPREF0889_1409;Name=HMPREF0889_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1409 GCA_000177555.1|ADGP01000013.1 Genbank CDS 62962 63984 . + 0 ID=cds-EFD94425.1;Parent=gene-HMPREF0889_1409;Dbxref=NCBI_GP:EFD94425.1;Name=EFD94425.1;Note=identified by match to protein family HMM PF03734;gbkey=CDS;locus_tag=HMPREF0889_1409;product=ErfK/YbiS/YcfS/YnhG;protein_id=EFD94425.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 64157 64639 . + . ID=gene-HMPREF0889_1410;Name=HMPREF0889_1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1410 GCA_000177555.1|ADGP01000013.1 Genbank CDS 64157 64639 . + 0 ID=cds-EFD94426.1;Parent=gene-HMPREF0889_1410;Dbxref=NCBI_GP:EFD94426.1;Name=EFD94426.1;gbkey=CDS;locus_tag=HMPREF0889_1410;product=hypothetical protein;protein_id=EFD94426.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 64731 65066 . + . ID=gene-HMPREF0889_1411;Name=HMPREF0889_1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1411 GCA_000177555.1|ADGP01000013.1 Genbank CDS 64731 65066 . + 0 ID=cds-EFD94427.1;Parent=gene-HMPREF0889_1411;Dbxref=NCBI_GP:EFD94427.1;Name=EFD94427.1;Note=identified by match to protein family HMM PF02579;gbkey=CDS;locus_tag=HMPREF0889_1411;product=dinitrogenase iron-molybdenum cofactor;protein_id=EFD94427.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 65129 65413 . + . ID=gene-HMPREF0889_1413;Name=HMPREF0889_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1413 GCA_000177555.1|ADGP01000013.1 Genbank CDS 65129 65413 . + 0 ID=cds-EFD94428.1;Parent=gene-HMPREF0889_1413;Dbxref=NCBI_GP:EFD94428.1;Name=EFD94428.1;gbkey=CDS;locus_tag=HMPREF0889_1413;product=hypothetical protein;protein_id=EFD94428.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 65410 66762 . - . ID=gene-HMPREF0889_1412;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1412 GCA_000177555.1|ADGP01000013.1 Genbank CDS 65410 66762 . - 0 ID=cds-EFD94429.1;Parent=gene-HMPREF0889_1412;Dbxref=NCBI_GP:EFD94429.1;Name=EFD94429.1;Note=identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508;gbkey=CDS;gene=bioA;locus_tag=HMPREF0889_1412;product=adenosylmethionine-8-amino-7-oxononanoate transaminase;protein_id=EFD94429.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 66766 67440 . - . ID=gene-HMPREF0889_1414;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1414 GCA_000177555.1|ADGP01000013.1 Genbank CDS 66766 67440 . - 0 ID=cds-EFD94430.1;Parent=gene-HMPREF0889_1414;Dbxref=NCBI_GP:EFD94430.1;Name=EFD94430.1;Note=identified by match to protein family HMM TIGR00347;gbkey=CDS;gene=bioD;locus_tag=HMPREF0889_1414;product=dethiobiotin synthase;protein_id=EFD94430.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 67457 68026 . - . ID=gene-HMPREF0889_1415;Name=HMPREF0889_1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1415 GCA_000177555.1|ADGP01000013.1 Genbank CDS 67457 68026 . - 0 ID=cds-EFD94431.1;Parent=gene-HMPREF0889_1415;Dbxref=NCBI_GP:EFD94431.1;Name=EFD94431.1;Note=identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=HMPREF0889_1415;product=BioY family protein;protein_id=EFD94431.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 68184 68630 . + . ID=gene-HMPREF0889_1416;Name=HMPREF0889_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1416 GCA_000177555.1|ADGP01000013.1 Genbank CDS 68184 68630 . + 0 ID=cds-EFD94432.1;Parent=gene-HMPREF0889_1416;Dbxref=NCBI_GP:EFD94432.1;Name=EFD94432.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1416;product=hypothetical protein;protein_id=EFD94432.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 68671 68746 . - . ID=gene-HMPREF0889_1417;Name=HMPREF0889_1417;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_1417 GCA_000177555.1|ADGP01000013.1 Genbank tRNA 68671 68746 . - . ID=rna-HMPREF0889_1417;Parent=gene-HMPREF0889_1417;gbkey=tRNA;locus_tag=HMPREF0889_1417;product=tRNA-Thr GCA_000177555.1|ADGP01000013.1 Genbank exon 68671 68746 . - . ID=exon-HMPREF0889_1417-1;Parent=rna-HMPREF0889_1417;gbkey=tRNA;locus_tag=HMPREF0889_1417;product=tRNA-Thr GCA_000177555.1|ADGP01000013.1 Genbank gene 69091 69240 . + . ID=gene-HMPREF0889_1418;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1418 GCA_000177555.1|ADGP01000013.1 Genbank CDS 69091 69240 . + 0 ID=cds-EFD94433.1;Parent=gene-HMPREF0889_1418;Dbxref=NCBI_GP:EFD94433.1;Name=EFD94433.1;Note=identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023;gbkey=CDS;gene=rpmG;locus_tag=HMPREF0889_1418;product=ribosomal protein L33;protein_id=EFD94433.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 69278 69508 . + . ID=gene-HMPREF0889_1419;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1419 GCA_000177555.1|ADGP01000013.1 Genbank CDS 69278 69508 . + 0 ID=cds-EFD94434.1;Parent=gene-HMPREF0889_1419;Dbxref=NCBI_GP:EFD94434.1;Name=EFD94434.1;Note=identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;locus_tag=HMPREF0889_1419;product=preprotein translocase%2C SecE subunit;protein_id=EFD94434.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 69524 70063 . + . ID=gene-HMPREF0889_1420;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1420 GCA_000177555.1|ADGP01000013.1 Genbank CDS 69524 70063 . + 0 ID=cds-EFD94435.1;Parent=gene-HMPREF0889_1420;Dbxref=NCBI_GP:EFD94435.1;Name=EFD94435.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;locus_tag=HMPREF0889_1420;product=transcription termination/antitermination factor NusG;protein_id=EFD94435.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 70155 70580 . + . ID=gene-HMPREF0889_1421;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=HMPREF0889_1421 GCA_000177555.1|ADGP01000013.1 Genbank CDS 70155 70580 . + 0 ID=cds-EFD94436.1;Parent=gene-HMPREF0889_1421;Dbxref=NCBI_GP:EFD94436.1;Name=EFD94436.1;Note=identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632;gbkey=CDS;gene=rplK;locus_tag=HMPREF0889_1421;product=ribosomal protein L11;protein_id=EFD94436.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 70639 71355 . + . ID=gene-HMPREF0889_1422;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1422 GCA_000177555.1|ADGP01000013.1 Genbank CDS 70639 71355 . + 0 ID=cds-EFD94437.1;Parent=gene-HMPREF0889_1422;Dbxref=NCBI_GP:EFD94437.1;Name=EFD94437.1;Note=identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169;gbkey=CDS;gene=rplA;locus_tag=HMPREF0889_1422;product=ribosomal protein L1;protein_id=EFD94437.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 71530 72087 . + . ID=gene-HMPREF0889_1423;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_1423 GCA_000177555.1|ADGP01000013.1 Genbank CDS 71530 72087 . + 0 ID=cds-EFD94438.1;Parent=gene-HMPREF0889_1423;Dbxref=NCBI_GP:EFD94438.1;Name=EFD94438.1;Note=identified by match to protein family HMM PF00466;gbkey=CDS;gene=rplJ;locus_tag=HMPREF0889_1423;product=ribosomal protein L10;protein_id=EFD94438.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 72135 72503 . + . ID=gene-HMPREF0889_1424;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF0889_1424 GCA_000177555.1|ADGP01000013.1 Genbank CDS 72135 72503 . + 0 ID=cds-EFD94439.1;Parent=gene-HMPREF0889_1424;Dbxref=NCBI_GP:EFD94439.1;Name=EFD94439.1;Note=identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855;gbkey=CDS;gene=rplL;locus_tag=HMPREF0889_1424;product=ribosomal protein L7/L12;protein_id=EFD94439.1;transl_table=11 GCA_000177555.1|ADGP01000013.1 Genbank gene 72637 73164 . + . ID=gene-HMPREF0889_1425;Name=HMPREF0889_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1425 GCA_000177555.1|ADGP01000013.1 Genbank CDS 72637 73164 . + 0 ID=cds-EFD94440.1;Parent=gene-HMPREF0889_1425;Dbxref=NCBI_GP:EFD94440.1;Name=EFD94440.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF0889_1425;product=nitroreductase family protein;protein_id=EFD94440.1;transl_table=11 ##sequence-region ADGP01000012.1 1 1306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000012.1 Genbank region 1 1306 . + . ID=ADGP01000012.1:1..1306;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000012.1 Genbank gene 1 1306 . - . ID=gene-HMPREF0889_1525;Name=HMPREF0889_1525;end_range=1306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1525;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000012.1 Genbank CDS 1 1306 . - 0 ID=cds-EFD94441.1;Parent=gene-HMPREF0889_1525;Dbxref=NCBI_GP:EFD94441.1;Name=EFD94441.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;end_range=1306,.;gbkey=CDS;locus_tag=HMPREF0889_1525;partial=true;product=Hep/Hag repeat protein;protein_id=EFD94441.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000011.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000011.1 Genbank region 1 593 . + . ID=ADGP01000011.1:1..593;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000011.1 Genbank gene 9 593 . + . ID=gene-HMPREF0889_0498;Name=HMPREF0889_0498;end_range=593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0498;partial=true GCA_000177555.1|ADGP01000011.1 Genbank CDS 9 593 . + 0 ID=cds-EFD94442.1;Parent=gene-HMPREF0889_0498;Dbxref=NCBI_GP:EFD94442.1;Name=EFD94442.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=593,.;gbkey=CDS;locus_tag=HMPREF0889_0498;partial=true;product=hypothetical protein;protein_id=EFD94442.1;transl_table=11 ##sequence-region ADGP01000010.1 1 1833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000010.1 Genbank region 1 1833 . + . ID=ADGP01000010.1:1..1833;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000010.1 Genbank gene 162 1681 . + . ID=gene-HMPREF0889_1545;Name=rrs;gbkey=Gene;gene=rrs;gene_biotype=rRNA;locus_tag=HMPREF0889_1545 GCA_000177555.1|ADGP01000010.1 Genbank rRNA 162 1681 . + . ID=rna-HMPREF0889_1545;Parent=gene-HMPREF0889_1545;gbkey=rRNA;gene=rrs;locus_tag=HMPREF0889_1545;product=16S ribosomal RNA GCA_000177555.1|ADGP01000010.1 Genbank exon 162 1681 . + . ID=exon-HMPREF0889_1545-1;Parent=rna-HMPREF0889_1545;gbkey=rRNA;gene=rrs;locus_tag=HMPREF0889_1545;product=16S ribosomal RNA ##sequence-region ADGP01000009.1 1 159128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000009.1 Genbank region 1 159128 . + . ID=ADGP01000009.1:1..159128;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000009.1 Genbank gene 175 609 . - . ID=gene-HMPREF0889_0502;Name=HMPREF0889_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0502 GCA_000177555.1|ADGP01000009.1 Genbank CDS 175 609 . - 0 ID=cds-EFD94443.1;Parent=gene-HMPREF0889_0502;Dbxref=NCBI_GP:EFD94443.1;Name=EFD94443.1;Note=identified by match to protein family HMM PF00258;gbkey=CDS;locus_tag=HMPREF0889_0502;product=flavodoxin;protein_id=EFD94443.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 807 1721 . + . ID=gene-HMPREF0889_0503;Name=HMPREF0889_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0503 GCA_000177555.1|ADGP01000009.1 Genbank CDS 807 1721 . + 0 ID=cds-EFD94444.1;Parent=gene-HMPREF0889_0503;Dbxref=NCBI_GP:EFD94444.1;Name=EFD94444.1;Note=identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745;gbkey=CDS;locus_tag=HMPREF0889_0503;product=2-dehydropantoate 2-reductase;protein_id=EFD94444.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 1731 2144 . - . ID=gene-HMPREF0889_0504;Name=maoC;gbkey=Gene;gene=maoC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0504 GCA_000177555.1|ADGP01000009.1 Genbank CDS 1731 2144 . - 0 ID=cds-EFD94445.1;Parent=gene-HMPREF0889_0504;Dbxref=NCBI_GP:EFD94445.1;Name=EFD94445.1;Note=identified by match to protein family HMM PF01575;gbkey=CDS;gene=maoC;locus_tag=HMPREF0889_0504;product=MaoC-like protein;protein_id=EFD94445.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 2287 3432 . - . ID=gene-HMPREF0889_0505;Name=HMPREF0889_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0505 GCA_000177555.1|ADGP01000009.1 Genbank CDS 2287 3432 . - 0 ID=cds-EFD94446.1;Parent=gene-HMPREF0889_0505;Dbxref=NCBI_GP:EFD94446.1;Name=EFD94446.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;locus_tag=HMPREF0889_0505;product=butyryl-CoA dehydrogenase;protein_id=EFD94446.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 3571 4692 . - . ID=gene-HMPREF0889_0506;Name=HMPREF0889_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0506 GCA_000177555.1|ADGP01000009.1 Genbank CDS 3571 4692 . - 0 ID=cds-EFD94447.1;Parent=gene-HMPREF0889_0506;Dbxref=NCBI_GP:EFD94447.1;Name=EFD94447.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;locus_tag=HMPREF0889_0506;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EFD94447.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 4692 5978 . - . ID=gene-HMPREF0889_0507;Name=HMPREF0889_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0507 GCA_000177555.1|ADGP01000009.1 Genbank CDS 4692 5978 . - 0 ID=cds-EFD94448.1;Parent=gene-HMPREF0889_0507;Dbxref=NCBI_GP:EFD94448.1;Name=EFD94448.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;locus_tag=HMPREF0889_0507;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EFD94448.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 6000 6776 . - . ID=gene-HMPREF0889_0508;Name=hgdC;gbkey=Gene;gene=hgdC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0508 GCA_000177555.1|ADGP01000009.1 Genbank CDS 6000 6776 . - 0 ID=cds-EFD94449.1;Parent=gene-HMPREF0889_0508;Dbxref=NCBI_GP:EFD94449.1;Name=EFD94449.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;gene=hgdC;locus_tag=HMPREF0889_0508;product=putative benzoyl-CoA reductase%2C subunit D;protein_id=EFD94449.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 6816 7733 . - . ID=gene-HMPREF0889_0509;Name=HMPREF0889_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0509 GCA_000177555.1|ADGP01000009.1 Genbank CDS 6816 7733 . - 0 ID=cds-EFD94450.1;Parent=gene-HMPREF0889_0509;Dbxref=NCBI_GP:EFD94450.1;Name=EFD94450.1;gbkey=CDS;locus_tag=HMPREF0889_0509;product=glyoxalase family protein;protein_id=EFD94450.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 7774 9327 . - . ID=gene-HMPREF0889_0510;Name=HMPREF0889_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0510 GCA_000177555.1|ADGP01000009.1 Genbank CDS 7774 9327 . - 0 ID=cds-EFD94451.1;Parent=gene-HMPREF0889_0510;Dbxref=NCBI_GP:EFD94451.1;Name=EFD94451.1;Note=identified by match to protein family HMM PF01144;gbkey=CDS;locus_tag=HMPREF0889_0510;product=CoA transferase;protein_id=EFD94451.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 10022 10765 . + . ID=gene-HMPREF0889_0511;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0511 GCA_000177555.1|ADGP01000009.1 Genbank CDS 10022 10765 . + 0 ID=cds-EFD94452.1;Parent=gene-HMPREF0889_0511;Dbxref=NCBI_GP:EFD94452.1;Name=EFD94452.1;Note=identified by match to protein family HMM PF01487%3B match to protein family HMM TIGR01093;gbkey=CDS;gene=aroD;locus_tag=HMPREF0889_0511;product=3-dehydroquinate dehydratase%2C type I;protein_id=EFD94452.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 10843 11298 . - . ID=gene-HMPREF0889_0512;Name=HMPREF0889_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0512 GCA_000177555.1|ADGP01000009.1 Genbank CDS 10843 11298 . - 0 ID=cds-EFD94453.1;Parent=gene-HMPREF0889_0512;Dbxref=NCBI_GP:EFD94453.1;Name=EFD94453.1;Note=identified by match to protein family HMM PF04463;gbkey=CDS;locus_tag=HMPREF0889_0512;product=hypothetical protein;protein_id=EFD94453.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 11425 13086 . + . ID=gene-HMPREF0889_0513;Name=HMPREF0889_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0513 GCA_000177555.1|ADGP01000009.1 Genbank CDS 11425 13086 . + 0 ID=cds-EFD94454.1;Parent=gene-HMPREF0889_0513;Dbxref=NCBI_GP:EFD94454.1;Name=EFD94454.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776;gbkey=CDS;locus_tag=HMPREF0889_0513;product=acetolactate synthase;protein_id=EFD94454.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 13138 13734 . - . ID=gene-HMPREF0889_0514;Name=HMPREF0889_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0514 GCA_000177555.1|ADGP01000009.1 Genbank CDS 13138 13734 . - 0 ID=cds-EFD94455.1;Parent=gene-HMPREF0889_0514;Dbxref=NCBI_GP:EFD94455.1;Name=EFD94455.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0514;product=hypothetical protein;protein_id=EFD94455.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 13866 14276 . + . ID=gene-HMPREF0889_0515;Name=HMPREF0889_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0515 GCA_000177555.1|ADGP01000009.1 Genbank CDS 13866 14276 . + 0 ID=cds-EFD94456.1;Parent=gene-HMPREF0889_0515;Dbxref=NCBI_GP:EFD94456.1;Name=EFD94456.1;gbkey=CDS;locus_tag=HMPREF0889_0515;product=hypothetical protein;protein_id=EFD94456.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 14288 14683 . + . ID=gene-HMPREF0889_0516;Name=HMPREF0889_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0516 GCA_000177555.1|ADGP01000009.1 Genbank CDS 14288 14683 . + 0 ID=cds-EFD94457.1;Parent=gene-HMPREF0889_0516;Dbxref=NCBI_GP:EFD94457.1;Name=EFD94457.1;gbkey=CDS;locus_tag=HMPREF0889_0516;product=hypothetical protein;protein_id=EFD94457.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 14865 15290 . - . ID=gene-HMPREF0889_0517;Name=gcdC;gbkey=Gene;gene=gcdC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0517 GCA_000177555.1|ADGP01000009.1 Genbank CDS 14865 15290 . - 0 ID=cds-EFD94458.1;Parent=gene-HMPREF0889_0517;Dbxref=NCBI_GP:EFD94458.1;Name=EFD94458.1;Note=identified by match to protein family HMM PF00364;gbkey=CDS;gene=gcdC;locus_tag=HMPREF0889_0517;product=glutaconyl-CoA decarboxylase subunit gamma;protein_id=EFD94458.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 15322 15714 . - . ID=gene-HMPREF0889_0518;Name=HMPREF0889_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0518 GCA_000177555.1|ADGP01000009.1 Genbank CDS 15322 15714 . - 0 ID=cds-EFD94459.1;Parent=gene-HMPREF0889_0518;Dbxref=NCBI_GP:EFD94459.1;Name=EFD94459.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0518;product=hypothetical protein;protein_id=EFD94459.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 15733 17262 . - . ID=gene-HMPREF0889_0519;Name=HMPREF0889_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0519 GCA_000177555.1|ADGP01000009.1 Genbank CDS 15733 17262 . - 0 ID=cds-EFD94460.1;Parent=gene-HMPREF0889_0519;Dbxref=NCBI_GP:EFD94460.1;Name=EFD94460.1;Note=identified by match to protein family HMM PF01039;gbkey=CDS;locus_tag=HMPREF0889_0519;product=carboxyl transferase domain protein;protein_id=EFD94460.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 17477 17565 . - . ID=gene-HMPREF0889_0520;Name=HMPREF0889_0520;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0520 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 17477 17565 . - . ID=rna-HMPREF0889_0520;Parent=gene-HMPREF0889_0520;gbkey=tRNA;locus_tag=HMPREF0889_0520;product=tRNA-Ser GCA_000177555.1|ADGP01000009.1 Genbank exon 17477 17565 . - . ID=exon-HMPREF0889_0520-1;Parent=rna-HMPREF0889_0520;gbkey=tRNA;locus_tag=HMPREF0889_0520;product=tRNA-Ser GCA_000177555.1|ADGP01000009.1 Genbank gene 17691 18437 . - . ID=gene-HMPREF0889_0521;Name=HMPREF0889_0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0521 GCA_000177555.1|ADGP01000009.1 Genbank CDS 17691 18437 . - 0 ID=cds-EFD94461.1;Parent=gene-HMPREF0889_0521;Dbxref=NCBI_GP:EFD94461.1;Name=EFD94461.1;Note=identified by match to protein family HMM PF01170%3B match to protein family HMM PF08241;gbkey=CDS;locus_tag=HMPREF0889_0521;product=methyltransferase domain protein;protein_id=EFD94461.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 18437 19318 . - . ID=gene-HMPREF0889_0522;Name=HMPREF0889_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0522 GCA_000177555.1|ADGP01000009.1 Genbank CDS 18437 19318 . - 0 ID=cds-EFD94462.1;Parent=gene-HMPREF0889_0522;Dbxref=NCBI_GP:EFD94462.1;Name=EFD94462.1;Note=identified by match to protein family HMM PF04556;gbkey=CDS;locus_tag=HMPREF0889_0522;product=DpmII restriction endonuclease;protein_id=EFD94462.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 19400 20470 . - . ID=gene-HMPREF0889_0523;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=HMPREF0889_0523 GCA_000177555.1|ADGP01000009.1 Genbank CDS 19400 20470 . - 0 ID=cds-EFD94463.1;Parent=gene-HMPREF0889_0523;Dbxref=NCBI_GP:EFD94463.1;Name=EFD94463.1;Note=identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571;gbkey=CDS;gene=dam;locus_tag=HMPREF0889_0523;product=DNA adenine methylase;protein_id=EFD94463.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 20605 21741 . - . ID=gene-HMPREF0889_0524;Name=hydE;gbkey=Gene;gene=hydE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0524 GCA_000177555.1|ADGP01000009.1 Genbank CDS 20605 21741 . - 0 ID=cds-EFD94464.1;Parent=gene-HMPREF0889_0524;Dbxref=NCBI_GP:EFD94464.1;Name=EFD94464.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;gene=hydE;locus_tag=HMPREF0889_0524;product=iron-only hydrogenase maturation rSAM protein HydE;protein_id=EFD94464.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 21945 22775 . - . ID=gene-HMPREF0889_0525;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0525 GCA_000177555.1|ADGP01000009.1 Genbank CDS 21945 22775 . - 0 ID=cds-EFD94465.1;Parent=gene-HMPREF0889_0525;Dbxref=NCBI_GP:EFD94465.1;Name=EFD94465.1;Note=identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753;gbkey=CDS;gene=uppP;locus_tag=HMPREF0889_0525;product=undecaprenyl-diphosphatase UppP;protein_id=EFD94465.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 22913 23878 . - . ID=gene-HMPREF0889_0526;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=HMPREF0889_0526 GCA_000177555.1|ADGP01000009.1 Genbank CDS 22913 23878 . - 0 ID=cds-EFD94466.1;Parent=gene-HMPREF0889_0526;Dbxref=NCBI_GP:EFD94466.1;Name=EFD94466.1;Note=identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330;gbkey=CDS;gene=glpX;locus_tag=HMPREF0889_0526;product=fructose-1%2C6-bisphosphatase%2C class II;protein_id=EFD94466.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 24020 25294 . - . ID=gene-HMPREF0889_0527;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0527 GCA_000177555.1|ADGP01000009.1 Genbank CDS 24020 25294 . - 0 ID=cds-EFD94467.1;Parent=gene-HMPREF0889_0527;Dbxref=NCBI_GP:EFD94467.1;Name=EFD94467.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414;gbkey=CDS;gene=serS;locus_tag=HMPREF0889_0527;product=serine--tRNA ligase;protein_id=EFD94467.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 25365 26003 . - . ID=gene-HMPREF0889_0528;Name=HMPREF0889_0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0528 GCA_000177555.1|ADGP01000009.1 Genbank CDS 25365 26003 . - 0 ID=cds-EFD94468.1;Parent=gene-HMPREF0889_0528;Dbxref=NCBI_GP:EFD94468.1;Name=EFD94468.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF0889_0528;product=phosphoglycerate mutase family protein;protein_id=EFD94468.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 26013 27605 . - . ID=gene-HMPREF0889_0529;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0529 GCA_000177555.1|ADGP01000009.1 Genbank CDS 26013 27605 . - 0 ID=cds-EFD94469.1;Parent=gene-HMPREF0889_0529;Dbxref=NCBI_GP:EFD94469.1;Name=EFD94469.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826%3B match to protein family HMM TIGR01327;gbkey=CDS;gene=serA;locus_tag=HMPREF0889_0529;product=phosphoglycerate dehydrogenase;protein_id=EFD94469.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 27623 28039 . - . ID=gene-HMPREF0889_0530;Name=HMPREF0889_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0530 GCA_000177555.1|ADGP01000009.1 Genbank CDS 27623 28039 . - 0 ID=cds-EFD94470.1;Parent=gene-HMPREF0889_0530;Dbxref=NCBI_GP:EFD94470.1;Name=EFD94470.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_0530;product=putative phosphoserine transaminase;protein_id=EFD94470.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 28026 28697 . - . ID=gene-HMPREF0889_0531;Name=HMPREF0889_0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0531 GCA_000177555.1|ADGP01000009.1 Genbank CDS 28026 28697 . - 0 ID=cds-EFD94471.1;Parent=gene-HMPREF0889_0531;Dbxref=NCBI_GP:EFD94471.1;Name=EFD94471.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=HMPREF0889_0531;product=putative phosphoserine transaminase;protein_id=EFD94471.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank sequence_feature 28739 28932 . - . ID=id-ADGP01000009.1:28739..28932;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000009.1 Genbank gene 28795 28941 . - . ID=gene-HMPREF0889_0533;Name=HMPREF0889_0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0533 GCA_000177555.1|ADGP01000009.1 Genbank CDS 28795 28941 . - 0 ID=cds-EFD94472.1;Parent=gene-HMPREF0889_0533;Dbxref=NCBI_GP:EFD94472.1;Name=EFD94472.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0533;product=hypothetical protein;protein_id=EFD94472.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 29017 29961 . - . ID=gene-HMPREF0889_0534;Name=HMPREF0889_0534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0534 GCA_000177555.1|ADGP01000009.1 Genbank CDS 29017 29961 . - 0 ID=cds-EFD94473.1;Parent=gene-HMPREF0889_0534;Dbxref=NCBI_GP:EFD94473.1;Name=EFD94473.1;gbkey=CDS;locus_tag=HMPREF0889_0534;product=hypothetical protein;protein_id=EFD94473.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 29982 30569 . - . ID=gene-HMPREF0889_0535;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0535 GCA_000177555.1|ADGP01000009.1 Genbank CDS 29982 30569 . - 0 ID=cds-EFD94474.1;Parent=gene-HMPREF0889_0535;Dbxref=NCBI_GP:EFD94474.1;Name=EFD94474.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01367;gbkey=CDS;gene=pyrE;locus_tag=HMPREF0889_0535;product=orotate phosphoribosyltransferase;protein_id=EFD94474.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 30576 31289 . - . ID=gene-HMPREF0889_0536;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0536 GCA_000177555.1|ADGP01000009.1 Genbank CDS 30576 31289 . - 0 ID=cds-EFD94475.1;Parent=gene-HMPREF0889_0536;Dbxref=NCBI_GP:EFD94475.1;Name=EFD94475.1;Note=identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740;gbkey=CDS;gene=pyrF;locus_tag=HMPREF0889_0536;product=orotidine 5'-phosphate decarboxylase;protein_id=EFD94475.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 31449 31613 . - . ID=gene-HMPREF0889_0537;Name=HMPREF0889_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0537 GCA_000177555.1|ADGP01000009.1 Genbank CDS 31449 31613 . - 0 ID=cds-EFD94476.1;Parent=gene-HMPREF0889_0537;Dbxref=NCBI_GP:EFD94476.1;Name=EFD94476.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF0889_0537;product=ferredoxin;protein_id=EFD94476.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 32041 33309 . - . ID=gene-HMPREF0889_0538;Name=HMPREF0889_0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0538 GCA_000177555.1|ADGP01000009.1 Genbank CDS 32041 33309 . - 0 ID=cds-EFD94477.1;Parent=gene-HMPREF0889_0538;Dbxref=NCBI_GP:EFD94477.1;Name=EFD94477.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;locus_tag=HMPREF0889_0538;product=putative permease;protein_id=EFD94477.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 33326 34567 . - . ID=gene-HMPREF0889_0539;Name=HMPREF0889_0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0539 GCA_000177555.1|ADGP01000009.1 Genbank CDS 33326 34567 . - 0 ID=cds-EFD94478.1;Parent=gene-HMPREF0889_0539;Dbxref=NCBI_GP:EFD94478.1;Name=EFD94478.1;Note=identified by match to protein family HMM PF01098;gbkey=CDS;locus_tag=HMPREF0889_0539;product=putative cell division protein FtsW;protein_id=EFD94478.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 34551 35225 . - . ID=gene-HMPREF0889_0540;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0540 GCA_000177555.1|ADGP01000009.1 Genbank CDS 34551 35225 . - 0 ID=cds-EFD94479.1;Parent=gene-HMPREF0889_0540;Dbxref=NCBI_GP:EFD94479.1;Name=EFD94479.1;Note=identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091;gbkey=CDS;gene=trmB;locus_tag=HMPREF0889_0540;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=EFD94479.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 35328 35540 . - . ID=gene-HMPREF0889_0541;Name=HMPREF0889_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0541 GCA_000177555.1|ADGP01000009.1 Genbank CDS 35328 35540 . - 0 ID=cds-EFD94480.1;Parent=gene-HMPREF0889_0541;Dbxref=NCBI_GP:EFD94480.1;Name=EFD94480.1;Note=identified by match to protein family HMM PF06107;gbkey=CDS;locus_tag=HMPREF0889_0541;product=hypothetical protein;protein_id=EFD94480.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 35812 36099 . + . ID=gene-HMPREF0889_0542;Name=HMPREF0889_0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0542 GCA_000177555.1|ADGP01000009.1 Genbank CDS 35812 36099 . + 0 ID=cds-EFD94481.1;Parent=gene-HMPREF0889_0542;Dbxref=NCBI_GP:EFD94481.1;Name=EFD94481.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0542;product=hypothetical protein;protein_id=EFD94481.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 36104 36676 . + . ID=gene-HMPREF0889_0543;Name=HMPREF0889_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0543 GCA_000177555.1|ADGP01000009.1 Genbank CDS 36104 36676 . + 0 ID=cds-EFD94482.1;Parent=gene-HMPREF0889_0543;Dbxref=NCBI_GP:EFD94482.1;Name=EFD94482.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0543;product=hypothetical protein;protein_id=EFD94482.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 36692 37237 . + . ID=gene-HMPREF0889_0544;Name=HMPREF0889_0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0544 GCA_000177555.1|ADGP01000009.1 Genbank CDS 36692 37237 . + 0 ID=cds-EFD94483.1;Parent=gene-HMPREF0889_0544;Dbxref=NCBI_GP:EFD94483.1;Name=EFD94483.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0544;product=hypothetical protein;protein_id=EFD94483.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 37522 38058 . + . ID=gene-HMPREF0889_0545;Name=HMPREF0889_0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0545 GCA_000177555.1|ADGP01000009.1 Genbank CDS 37522 38058 . + 0 ID=cds-EFD94484.1;Parent=gene-HMPREF0889_0545;Dbxref=NCBI_GP:EFD94484.1;Name=EFD94484.1;Note=identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF0889_0545;product=rubredoxin;protein_id=EFD94484.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 38340 39260 . + . ID=gene-HMPREF0889_0546;Name=HMPREF0889_0546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0546 GCA_000177555.1|ADGP01000009.1 Genbank CDS 38340 39260 . + 0 ID=cds-EFD94485.1;Parent=gene-HMPREF0889_0546;Dbxref=NCBI_GP:EFD94485.1;Name=EFD94485.1;gbkey=CDS;locus_tag=HMPREF0889_0546;product=hypothetical protein;protein_id=EFD94485.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 39244 40038 . + . ID=gene-HMPREF0889_0547;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0547 GCA_000177555.1|ADGP01000009.1 Genbank CDS 39244 40038 . + 0 ID=cds-EFD94486.1;Parent=gene-HMPREF0889_0547;Dbxref=NCBI_GP:EFD94486.1;Name=EFD94486.1;Note=identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222;gbkey=CDS;gene=panB;locus_tag=HMPREF0889_0547;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=EFD94486.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 40128 40286 . + . ID=gene-HMPREF0889_0548;Name=HMPREF0889_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0548 GCA_000177555.1|ADGP01000009.1 Genbank CDS 40128 40286 . + 0 ID=cds-EFD94487.1;Parent=gene-HMPREF0889_0548;Dbxref=NCBI_GP:EFD94487.1;Name=EFD94487.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0548;product=hypothetical protein;protein_id=EFD94487.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 40283 41461 . + . ID=gene-HMPREF0889_0550;Name=HMPREF0889_0550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0550 GCA_000177555.1|ADGP01000009.1 Genbank CDS 40283 41461 . + 0 ID=cds-EFD94488.1;Parent=gene-HMPREF0889_0550;Dbxref=NCBI_GP:EFD94488.1;Name=EFD94488.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0550;product=hypothetical protein;protein_id=EFD94488.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 41438 41572 . - . ID=gene-HMPREF0889_0549;Name=HMPREF0889_0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0549 GCA_000177555.1|ADGP01000009.1 Genbank CDS 41438 41572 . - 0 ID=cds-EFD94489.1;Parent=gene-HMPREF0889_0549;Dbxref=NCBI_GP:EFD94489.1;Name=EFD94489.1;gbkey=CDS;locus_tag=HMPREF0889_0549;product=hypothetical protein;protein_id=EFD94489.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 41565 42530 . - . ID=gene-HMPREF0889_0551;Name=HMPREF0889_0551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0551 GCA_000177555.1|ADGP01000009.1 Genbank CDS 41565 42530 . - 0 ID=cds-EFD94490.1;Parent=gene-HMPREF0889_0551;Dbxref=NCBI_GP:EFD94490.1;Name=EFD94490.1;Note=identified by match to protein family HMM PF00768;gbkey=CDS;locus_tag=HMPREF0889_0551;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=EFD94490.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 42634 43137 . - . ID=gene-HMPREF0889_0552;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0552 GCA_000177555.1|ADGP01000009.1 Genbank CDS 42634 43137 . - 0 ID=cds-EFD94491.1;Parent=gene-HMPREF0889_0552;Dbxref=NCBI_GP:EFD94491.1;Name=EFD94491.1;Note=identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=HMPREF0889_0552;product=shikimate kinase;protein_id=EFD94491.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 43124 43945 . - . ID=gene-HMPREF0889_0553;Name=HMPREF0889_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0553 GCA_000177555.1|ADGP01000009.1 Genbank CDS 43124 43945 . - 0 ID=cds-EFD94492.1;Parent=gene-HMPREF0889_0553;Dbxref=NCBI_GP:EFD94492.1;Name=EFD94492.1;Note=identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501;gbkey=CDS;locus_tag=HMPREF0889_0553;product=putative shikimate dehydrogenase;protein_id=EFD94492.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 43908 44771 . - . ID=gene-HMPREF0889_0554;Name=HMPREF0889_0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0554 GCA_000177555.1|ADGP01000009.1 Genbank CDS 43908 44771 . - 0 ID=cds-EFD94493.1;Parent=gene-HMPREF0889_0554;Dbxref=NCBI_GP:EFD94493.1;Name=EFD94493.1;Note=identified by match to protein family HMM PF00800%3B match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF0889_0554;product=prephenate dehydratase;protein_id=EFD94493.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 44768 45862 . - . ID=gene-HMPREF0889_0555;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0555 GCA_000177555.1|ADGP01000009.1 Genbank CDS 44768 45862 . - 0 ID=cds-EFD94494.1;Parent=gene-HMPREF0889_0555;Dbxref=NCBI_GP:EFD94494.1;Name=EFD94494.1;Note=identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033;gbkey=CDS;gene=aroC;locus_tag=HMPREF0889_0555;product=chorismate synthase;protein_id=EFD94494.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 45864 47144 . - . ID=gene-HMPREF0889_0556;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0556 GCA_000177555.1|ADGP01000009.1 Genbank CDS 45864 47144 . - 0 ID=cds-EFD94495.1;Parent=gene-HMPREF0889_0556;Dbxref=NCBI_GP:EFD94495.1;Name=EFD94495.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356;gbkey=CDS;gene=aroA;locus_tag=HMPREF0889_0556;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=EFD94495.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 47152 48213 . - . ID=gene-HMPREF0889_0557;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0557 GCA_000177555.1|ADGP01000009.1 Genbank CDS 47152 48213 . - 0 ID=cds-EFD94496.1;Parent=gene-HMPREF0889_0557;Dbxref=NCBI_GP:EFD94496.1;Name=EFD94496.1;Note=identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357;gbkey=CDS;gene=aroB;locus_tag=HMPREF0889_0557;product=3-dehydroquinate synthase;protein_id=EFD94496.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 48200 49078 . - . ID=gene-HMPREF0889_0558;Name=HMPREF0889_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0558 GCA_000177555.1|ADGP01000009.1 Genbank CDS 48200 49078 . - 0 ID=cds-EFD94497.1;Parent=gene-HMPREF0889_0558;Dbxref=NCBI_GP:EFD94497.1;Name=EFD94497.1;Note=identified by match to protein family HMM PF02153;gbkey=CDS;locus_tag=HMPREF0889_0558;product=prephenate dehydrogenase;protein_id=EFD94497.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 49088 50107 . - . ID=gene-HMPREF0889_0559;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0559 GCA_000177555.1|ADGP01000009.1 Genbank CDS 49088 50107 . - 0 ID=cds-EFD94498.1;Parent=gene-HMPREF0889_0559;Dbxref=NCBI_GP:EFD94498.1;Name=EFD94498.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361;gbkey=CDS;gene=aroF;locus_tag=HMPREF0889_0559;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=EFD94498.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 50450 51379 . - . ID=gene-HMPREF0889_0560;Name=HMPREF0889_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0560 GCA_000177555.1|ADGP01000009.1 Genbank CDS 50450 51379 . - 0 ID=cds-EFD94499.1;Parent=gene-HMPREF0889_0560;Dbxref=NCBI_GP:EFD94499.1;Name=EFD94499.1;Note=identified by match to protein family HMM PF01522;gbkey=CDS;locus_tag=HMPREF0889_0560;product=polysaccharide deacetylase;protein_id=EFD94499.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 51382 52167 . - . ID=gene-HMPREF0889_0561;Name=HMPREF0889_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0561 GCA_000177555.1|ADGP01000009.1 Genbank CDS 51382 52167 . - 0 ID=cds-EFD94500.1;Parent=gene-HMPREF0889_0561;Dbxref=NCBI_GP:EFD94500.1;Name=EFD94500.1;Note=identified by match to protein family HMM TIGR03172;gbkey=CDS;locus_tag=HMPREF0889_0561;product=putative selenium-dependent hydroxylase accessory protein YqeC;protein_id=EFD94500.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 52194 52946 . - . ID=gene-HMPREF0889_0562;Name=HMPREF0889_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0562 GCA_000177555.1|ADGP01000009.1 Genbank CDS 52194 52946 . - 0 ID=cds-EFD94501.1;Parent=gene-HMPREF0889_0562;Dbxref=NCBI_GP:EFD94501.1;Name=EFD94501.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0562;product=hypothetical protein;protein_id=EFD94501.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 52972 53664 . - . ID=gene-HMPREF0889_0563;Name=HMPREF0889_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0563 GCA_000177555.1|ADGP01000009.1 Genbank CDS 52972 53664 . - 0 ID=cds-EFD94502.1;Parent=gene-HMPREF0889_0563;Dbxref=NCBI_GP:EFD94502.1;Name=EFD94502.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0563;product=hypothetical protein;protein_id=EFD94502.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 53785 54159 . - . ID=gene-HMPREF0889_0564;Name=HMPREF0889_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0564 GCA_000177555.1|ADGP01000009.1 Genbank CDS 53785 54159 . - 0 ID=cds-EFD94503.1;Parent=gene-HMPREF0889_0564;Dbxref=NCBI_GP:EFD94503.1;Name=EFD94503.1;Note=identified by match to protein family HMM PF02537;gbkey=CDS;locus_tag=HMPREF0889_0564;product=putative protein CrcB;protein_id=EFD94503.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 54375 54596 . + . ID=gene-HMPREF0889_0565;Name=HMPREF0889_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0565 GCA_000177555.1|ADGP01000009.1 Genbank CDS 54375 54596 . + 0 ID=cds-EFD94504.1;Parent=gene-HMPREF0889_0565;Dbxref=NCBI_GP:EFD94504.1;Name=EFD94504.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0565;product=hypothetical protein;protein_id=EFD94504.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 54656 55540 . - . ID=gene-HMPREF0889_0566;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0566 GCA_000177555.1|ADGP01000009.1 Genbank CDS 54656 55540 . - 0 ID=cds-EFD94505.1;Parent=gene-HMPREF0889_0566;Dbxref=NCBI_GP:EFD94505.1;Name=EFD94505.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718;gbkey=CDS;gene=sdaAA;locus_tag=HMPREF0889_0566;product=L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit;protein_id=EFD94505.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 55551 56210 . - . ID=gene-HMPREF0889_0567;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0567 GCA_000177555.1|ADGP01000009.1 Genbank CDS 55551 56210 . - 0 ID=cds-EFD94506.1;Parent=gene-HMPREF0889_0567;Dbxref=NCBI_GP:EFD94506.1;Name=EFD94506.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719;gbkey=CDS;gene=sdaAB;locus_tag=HMPREF0889_0567;product=L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit;protein_id=EFD94506.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 56232 59885 . - . ID=gene-HMPREF0889_0568;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0568 GCA_000177555.1|ADGP01000009.1 Genbank CDS 56232 59885 . - 0 ID=cds-EFD94507.1;Parent=gene-HMPREF0889_0568;Dbxref=NCBI_GP:EFD94507.1;Name=EFD94507.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR02785;gbkey=CDS;gene=addA;locus_tag=HMPREF0889_0568;product=ATP-dependent nuclease subunit A;protein_id=EFD94507.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 59872 63246 . - . ID=gene-HMPREF0889_0569;Name=HMPREF0889_0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0569 GCA_000177555.1|ADGP01000009.1 Genbank CDS 59872 63246 . - 0 ID=cds-EFD94508.1;Parent=gene-HMPREF0889_0569;Dbxref=NCBI_GP:EFD94508.1;Name=EFD94508.1;gbkey=CDS;locus_tag=HMPREF0889_0569;product=putative ATP-dependent nuclease subunit B;protein_id=EFD94508.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 63237 63356 . - . ID=gene-HMPREF0889_0570;Name=HMPREF0889_0570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0570 GCA_000177555.1|ADGP01000009.1 Genbank CDS 63237 63356 . - 0 ID=cds-EFD94509.1;Parent=gene-HMPREF0889_0570;Dbxref=NCBI_GP:EFD94509.1;Name=EFD94509.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0570;product=hypothetical protein;protein_id=EFD94509.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 63414 64457 . - . ID=gene-HMPREF0889_0571;Name=HMPREF0889_0571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0571 GCA_000177555.1|ADGP01000009.1 Genbank CDS 63414 64457 . - 0 ID=cds-EFD94510.1;Parent=gene-HMPREF0889_0571;Dbxref=NCBI_GP:EFD94510.1;Name=EFD94510.1;Note=identified by match to protein family HMM PF03747;gbkey=CDS;locus_tag=HMPREF0889_0571;product=ADP-ribosylglycohydrolase;protein_id=EFD94510.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 64483 65427 . - . ID=gene-HMPREF0889_0572;Name=HMPREF0889_0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0572 GCA_000177555.1|ADGP01000009.1 Genbank CDS 64483 65427 . - 0 ID=cds-EFD94511.1;Parent=gene-HMPREF0889_0572;Dbxref=NCBI_GP:EFD94511.1;Name=EFD94511.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=HMPREF0889_0572;product=cation diffusion facilitator family transporter;protein_id=EFD94511.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 65449 65595 . - . ID=gene-HMPREF0889_0573;Name=HMPREF0889_0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0573 GCA_000177555.1|ADGP01000009.1 Genbank CDS 65449 65595 . - 0 ID=cds-EFD94512.1;Parent=gene-HMPREF0889_0573;Dbxref=NCBI_GP:EFD94512.1;Name=EFD94512.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0573;product=hypothetical protein;protein_id=EFD94512.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 65790 66677 . + . ID=gene-HMPREF0889_0574;Name=HMPREF0889_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0574 GCA_000177555.1|ADGP01000009.1 Genbank CDS 65790 66677 . + 0 ID=cds-EFD94513.1;Parent=gene-HMPREF0889_0574;Dbxref=NCBI_GP:EFD94513.1;Name=EFD94513.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;locus_tag=HMPREF0889_0574;product=transporter%2C small conductance mechanosensitive ion channel MscS family protein;protein_id=EFD94513.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 66737 68074 . - . ID=gene-HMPREF0889_0575;Name=HMPREF0889_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0575 GCA_000177555.1|ADGP01000009.1 Genbank CDS 66737 68074 . - 0 ID=cds-EFD94514.1;Parent=gene-HMPREF0889_0575;Dbxref=NCBI_GP:EFD94514.1;Name=EFD94514.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF0889_0575;product=Acetyl-CoA hydrolase/transferase;protein_id=EFD94514.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 68079 68696 . - . ID=gene-HMPREF0889_0576;Name=HMPREF0889_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0576 GCA_000177555.1|ADGP01000009.1 Genbank CDS 68079 68696 . - 0 ID=cds-EFD94515.1;Parent=gene-HMPREF0889_0576;Dbxref=NCBI_GP:EFD94515.1;Name=EFD94515.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF0889_0576;product=indolepyruvate oxidoreductase subunit beta;protein_id=EFD94515.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 68697 70478 . - . ID=gene-HMPREF0889_0577;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0577 GCA_000177555.1|ADGP01000009.1 Genbank CDS 68697 70478 . - 0 ID=cds-EFD94516.1;Parent=gene-HMPREF0889_0577;Dbxref=NCBI_GP:EFD94516.1;Name=EFD94516.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01855%3B match to protein family HMM PF02775%3B match to protein family HMM TIGR03336;gbkey=CDS;gene=iorA;locus_tag=HMPREF0889_0577;product=indolepyruvate ferredoxin oxidoreductase%2C alpha subunit;protein_id=EFD94516.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 70680 72545 . + . ID=gene-HMPREF0889_0578;Name=HMPREF0889_0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0578 GCA_000177555.1|ADGP01000009.1 Genbank CDS 70680 72545 . + 0 ID=cds-EFD94517.1;Parent=gene-HMPREF0889_0578;Dbxref=NCBI_GP:EFD94517.1;Name=EFD94517.1;Note=identified by match to protein family HMM PF00158;gbkey=CDS;locus_tag=HMPREF0889_0578;product=Sigma-54 interaction domain protein;protein_id=EFD94517.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 72623 77359 . - . ID=gene-HMPREF0889_0579;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0579 GCA_000177555.1|ADGP01000009.1 Genbank CDS 72623 77359 . - 0 ID=cds-EFD94518.1;Parent=gene-HMPREF0889_0579;Dbxref=NCBI_GP:EFD94518.1;Name=EFD94518.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0579;product=TonB-dependent receptor plug domain protein;protein_id=EFD94518.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 77645 78958 . - . ID=gene-HMPREF0889_0580;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=HMPREF0889_0580 GCA_000177555.1|ADGP01000009.1 Genbank CDS 77645 78958 . - 0 ID=cds-EFD94519.1;Parent=gene-HMPREF0889_0580;Dbxref=NCBI_GP:EFD94519.1;Name=EFD94519.1;gbkey=CDS;gene=stp;locus_tag=HMPREF0889_0580;product=serine transporter;protein_id=EFD94519.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 79127 80314 . - . ID=gene-HMPREF0889_0581;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF0889_0581 GCA_000177555.1|ADGP01000009.1 Genbank CDS 79127 80314 . - 0 ID=cds-EFD94520.1;Parent=gene-HMPREF0889_0581;Dbxref=NCBI_GP:EFD94520.1;Name=EFD94520.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=HMPREF0889_0581;product=translation elongation factor Tu;protein_id=EFD94520.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 80448 80524 . - . ID=gene-HMPREF0889_0582;Name=HMPREF0889_0582;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0582 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 80448 80524 . - . ID=rna-HMPREF0889_0582;Parent=gene-HMPREF0889_0582;gbkey=tRNA;locus_tag=HMPREF0889_0582;product=tRNA-Met GCA_000177555.1|ADGP01000009.1 Genbank exon 80448 80524 . - . ID=exon-HMPREF0889_0582-1;Parent=rna-HMPREF0889_0582;gbkey=tRNA;locus_tag=HMPREF0889_0582;product=tRNA-Met GCA_000177555.1|ADGP01000009.1 Genbank gene 80530 80605 . - . ID=gene-HMPREF0889_0583;Name=HMPREF0889_0583;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0583 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 80530 80605 . - . ID=rna-HMPREF0889_0583;Parent=gene-HMPREF0889_0583;gbkey=tRNA;locus_tag=HMPREF0889_0583;product=tRNA-Thr GCA_000177555.1|ADGP01000009.1 Genbank exon 80530 80605 . - . ID=exon-HMPREF0889_0583-1;Parent=rna-HMPREF0889_0583;gbkey=tRNA;locus_tag=HMPREF0889_0583;product=tRNA-Thr GCA_000177555.1|ADGP01000009.1 Genbank gene 80671 80746 . - . ID=gene-HMPREF0889_0584;Name=HMPREF0889_0584;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0584 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 80671 80746 . - . ID=rna-HMPREF0889_0584;Parent=gene-HMPREF0889_0584;gbkey=tRNA;locus_tag=HMPREF0889_0584;product=tRNA-Met GCA_000177555.1|ADGP01000009.1 Genbank exon 80671 80746 . - . ID=exon-HMPREF0889_0584-1;Parent=rna-HMPREF0889_0584;gbkey=tRNA;locus_tag=HMPREF0889_0584;product=tRNA-Met GCA_000177555.1|ADGP01000009.1 Genbank gene 80751 80836 . - . ID=gene-HMPREF0889_0585;Name=HMPREF0889_0585;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0585 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 80751 80836 . - . ID=rna-HMPREF0889_0585;Parent=gene-HMPREF0889_0585;gbkey=tRNA;locus_tag=HMPREF0889_0585;product=tRNA-Tyr GCA_000177555.1|ADGP01000009.1 Genbank exon 80751 80836 . - . ID=exon-HMPREF0889_0585-1;Parent=rna-HMPREF0889_0585;gbkey=tRNA;locus_tag=HMPREF0889_0585;product=tRNA-Tyr GCA_000177555.1|ADGP01000009.1 Genbank gene 80844 80919 . - . ID=gene-HMPREF0889_0586;Name=HMPREF0889_0586;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0586 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 80844 80919 . - . ID=rna-HMPREF0889_0586;Parent=gene-HMPREF0889_0586;gbkey=tRNA;locus_tag=HMPREF0889_0586;product=tRNA-Thr GCA_000177555.1|ADGP01000009.1 Genbank exon 80844 80919 . - . ID=exon-HMPREF0889_0586-1;Parent=rna-HMPREF0889_0586;gbkey=tRNA;locus_tag=HMPREF0889_0586;product=tRNA-Thr GCA_000177555.1|ADGP01000009.1 Genbank gene 81254 84688 . + . ID=gene-HMPREF0889_0587;Name=pyc;gbkey=Gene;gene=pyc;gene_biotype=protein_coding;locus_tag=HMPREF0889_0587 GCA_000177555.1|ADGP01000009.1 Genbank CDS 81254 84688 . + 0 ID=cds-EFD94521.1;Parent=gene-HMPREF0889_0587;Dbxref=NCBI_GP:EFD94521.1;Name=EFD94521.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02222%3B match to protein family HMM PF02436%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01235;gbkey=CDS;gene=pyc;locus_tag=HMPREF0889_0587;product=pyruvate carboxylase;protein_id=EFD94521.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 84818 85654 . + . ID=gene-HMPREF0889_0588;Name=HMPREF0889_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0588 GCA_000177555.1|ADGP01000009.1 Genbank CDS 84818 85654 . + 0 ID=cds-EFD94522.1;Parent=gene-HMPREF0889_0588;Dbxref=NCBI_GP:EFD94522.1;Name=EFD94522.1;gbkey=CDS;locus_tag=HMPREF0889_0588;product=hypothetical protein;protein_id=EFD94522.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 85730 85927 . - . ID=gene-HMPREF0889_0589;Name=HMPREF0889_0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0589 GCA_000177555.1|ADGP01000009.1 Genbank CDS 85730 85927 . - 0 ID=cds-EFD94523.1;Parent=gene-HMPREF0889_0589;Dbxref=NCBI_GP:EFD94523.1;Name=EFD94523.1;gbkey=CDS;locus_tag=HMPREF0889_0589;product=hypothetical protein;protein_id=EFD94523.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 86047 87060 . + . ID=gene-HMPREF0889_0590;Name=HMPREF0889_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0590 GCA_000177555.1|ADGP01000009.1 Genbank CDS 86047 87060 . + 0 ID=cds-EFD94524.1;Parent=gene-HMPREF0889_0590;Dbxref=NCBI_GP:EFD94524.1;Name=EFD94524.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;locus_tag=HMPREF0889_0590;product=transcriptional regulator%2C LacI family;protein_id=EFD94524.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 87163 88455 . - . ID=gene-HMPREF0889_0591;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0591 GCA_000177555.1|ADGP01000009.1 Genbank CDS 87163 88455 . - 0 ID=cds-EFD94525.1;Parent=gene-HMPREF0889_0591;Dbxref=NCBI_GP:EFD94525.1;Name=EFD94525.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928;gbkey=CDS;gene=purB;locus_tag=HMPREF0889_0591;product=adenylosuccinate lyase;protein_id=EFD94525.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 88614 89696 . - . ID=gene-HMPREF0889_0592;Name=HMPREF0889_0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0592 GCA_000177555.1|ADGP01000009.1 Genbank CDS 88614 89696 . - 0 ID=cds-EFD94526.1;Parent=gene-HMPREF0889_0592;Dbxref=NCBI_GP:EFD94526.1;Name=EFD94526.1;gbkey=CDS;locus_tag=HMPREF0889_0592;product=hypothetical protein;protein_id=EFD94526.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 90037 91434 . - . ID=gene-HMPREF0889_0593;Name=HMPREF0889_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0593 GCA_000177555.1|ADGP01000009.1 Genbank CDS 90037 91434 . - 0 ID=cds-EFD94527.1;Parent=gene-HMPREF0889_0593;Dbxref=NCBI_GP:EFD94527.1;Name=EFD94527.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266;gbkey=CDS;locus_tag=HMPREF0889_0593;product=FAD dependent oxidoreductase;protein_id=EFD94527.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 91575 92006 . + . ID=gene-HMPREF0889_0594;Name=HMPREF0889_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0594 GCA_000177555.1|ADGP01000009.1 Genbank CDS 91575 92006 . + 0 ID=cds-EFD94528.1;Parent=gene-HMPREF0889_0594;Dbxref=NCBI_GP:EFD94528.1;Name=EFD94528.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0594;product=hypothetical protein;protein_id=EFD94528.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 92396 93349 . - . ID=gene-HMPREF0889_0595;Name=HMPREF0889_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0595 GCA_000177555.1|ADGP01000009.1 Genbank CDS 92396 93349 . - 0 ID=cds-EFD94529.1;Parent=gene-HMPREF0889_0595;Dbxref=NCBI_GP:EFD94529.1;Name=EFD94529.1;Note=identified by match to protein family HMM PF07751;gbkey=CDS;locus_tag=HMPREF0889_0595;product=Abi-like protein;protein_id=EFD94529.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 93630 93715 . - . ID=gene-HMPREF0889_0596;Name=HMPREF0889_0596;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0596 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 93630 93715 . - . ID=rna-HMPREF0889_0596;Parent=gene-HMPREF0889_0596;gbkey=tRNA;locus_tag=HMPREF0889_0596;product=tRNA-Leu GCA_000177555.1|ADGP01000009.1 Genbank exon 93630 93715 . - . ID=exon-HMPREF0889_0596-1;Parent=rna-HMPREF0889_0596;gbkey=tRNA;locus_tag=HMPREF0889_0596;product=tRNA-Leu GCA_000177555.1|ADGP01000009.1 Genbank gene 93729 93804 . - . ID=gene-HMPREF0889_0597;Name=HMPREF0889_0597;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0597 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 93729 93804 . - . ID=rna-HMPREF0889_0597;Parent=gene-HMPREF0889_0597;gbkey=tRNA;locus_tag=HMPREF0889_0597;product=tRNA-Phe GCA_000177555.1|ADGP01000009.1 Genbank exon 93729 93804 . - . ID=exon-HMPREF0889_0597-1;Parent=rna-HMPREF0889_0597;gbkey=tRNA;locus_tag=HMPREF0889_0597;product=tRNA-Phe GCA_000177555.1|ADGP01000009.1 Genbank gene 93810 93886 . - . ID=gene-HMPREF0889_0598;Name=HMPREF0889_0598;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0598 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 93810 93886 . - . ID=rna-HMPREF0889_0598;Parent=gene-HMPREF0889_0598;gbkey=tRNA;locus_tag=HMPREF0889_0598;product=tRNA-Asp GCA_000177555.1|ADGP01000009.1 Genbank exon 93810 93886 . - . ID=exon-HMPREF0889_0598-1;Parent=rna-HMPREF0889_0598;gbkey=tRNA;locus_tag=HMPREF0889_0598;product=tRNA-Asp GCA_000177555.1|ADGP01000009.1 Genbank gene 94087 96735 . + . ID=gene-HMPREF0889_0599;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0599 GCA_000177555.1|ADGP01000009.1 Genbank CDS 94087 96735 . + 0 ID=cds-EFD94530.1;Parent=gene-HMPREF0889_0599;Dbxref=NCBI_GP:EFD94530.1;Name=EFD94530.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524;gbkey=CDS;gene=mgtA;locus_tag=HMPREF0889_0599;product=magnesium-importing ATPase;protein_id=EFD94530.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 96748 97254 . + . ID=gene-HMPREF0889_0600;Name=HMPREF0889_0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0600 GCA_000177555.1|ADGP01000009.1 Genbank CDS 96748 97254 . + 0 ID=cds-EFD94531.1;Parent=gene-HMPREF0889_0600;Dbxref=NCBI_GP:EFD94531.1;Name=EFD94531.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF0889_0600;product=transcriptional regulatory protein%2C C-terminal domain protein;protein_id=EFD94531.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 97350 100097 . + . ID=gene-HMPREF0889_0601;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0601 GCA_000177555.1|ADGP01000009.1 Genbank CDS 97350 100097 . + 0 ID=cds-EFD94532.1;Parent=gene-HMPREF0889_0601;Dbxref=NCBI_GP:EFD94532.1;Name=EFD94532.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524;gbkey=CDS;gene=mgtA;locus_tag=HMPREF0889_0601;product=magnesium-importing ATPase;protein_id=EFD94532.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 100290 102143 . + . ID=gene-HMPREF0889_0602;Name=HMPREF0889_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0602 GCA_000177555.1|ADGP01000009.1 Genbank CDS 100290 102143 . + 0 ID=cds-EFD94533.1;Parent=gene-HMPREF0889_0602;Dbxref=NCBI_GP:EFD94533.1;Name=EFD94533.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF0889_0602;product=arylsulfatase;protein_id=EFD94533.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 102220 103011 . - . ID=gene-HMPREF0889_0603;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0603 GCA_000177555.1|ADGP01000009.1 Genbank CDS 102220 103011 . - 0 ID=cds-EFD94534.1;Parent=gene-HMPREF0889_0603;Dbxref=NCBI_GP:EFD94534.1;Name=EFD94534.1;Note=identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262;gbkey=CDS;gene=trpA;locus_tag=HMPREF0889_0603;product=tryptophan synthase%2C alpha subunit;protein_id=EFD94534.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 103004 104188 . - . ID=gene-HMPREF0889_0604;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0604 GCA_000177555.1|ADGP01000009.1 Genbank CDS 103004 104188 . - 0 ID=cds-EFD94535.1;Parent=gene-HMPREF0889_0604;Dbxref=NCBI_GP:EFD94535.1;Name=EFD94535.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263;gbkey=CDS;gene=trpB;locus_tag=HMPREF0889_0604;product=tryptophan synthase%2C beta subunit;protein_id=EFD94535.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 104190 104789 . - . ID=gene-HMPREF0889_0605;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0605 GCA_000177555.1|ADGP01000009.1 Genbank CDS 104190 104789 . - 0 ID=cds-EFD94536.1;Parent=gene-HMPREF0889_0605;Dbxref=NCBI_GP:EFD94536.1;Name=EFD94536.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00697;gbkey=CDS;gene=trpF;locus_tag=HMPREF0889_0605;product=N-(5'phosphoribosyl)anthranilate isomerase;protein_id=EFD94536.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 104786 105568 . - . ID=gene-HMPREF0889_0606;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0606 GCA_000177555.1|ADGP01000009.1 Genbank CDS 104786 105568 . - 0 ID=cds-EFD94537.1;Parent=gene-HMPREF0889_0606;Dbxref=NCBI_GP:EFD94537.1;Name=EFD94537.1;Note=identified by match to protein family HMM PF00218;gbkey=CDS;gene=trpC;locus_tag=HMPREF0889_0606;product=indole-3-glycerol phosphate synthase;protein_id=EFD94537.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 105565 106119 . - . ID=gene-HMPREF0889_0607;Name=HMPREF0889_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0607 GCA_000177555.1|ADGP01000009.1 Genbank CDS 105565 106119 . - 0 ID=cds-EFD94538.1;Parent=gene-HMPREF0889_0607;Dbxref=NCBI_GP:EFD94538.1;Name=EFD94538.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00591;gbkey=CDS;locus_tag=HMPREF0889_0607;product=putative anthranilate phosphoribosyltransferase;protein_id=EFD94538.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 106116 106589 . - . ID=gene-HMPREF0889_0608;Name=HMPREF0889_0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0608 GCA_000177555.1|ADGP01000009.1 Genbank CDS 106116 106589 . - 0 ID=cds-EFD94539.1;Parent=gene-HMPREF0889_0608;Dbxref=NCBI_GP:EFD94539.1;Name=EFD94539.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02885;gbkey=CDS;locus_tag=HMPREF0889_0608;product=putative anthranilate phosphoribosyltransferase;protein_id=EFD94539.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 106602 107168 . - . ID=gene-HMPREF0889_0609;Name=HMPREF0889_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0609 GCA_000177555.1|ADGP01000009.1 Genbank CDS 106602 107168 . - 0 ID=cds-EFD94540.1;Parent=gene-HMPREF0889_0609;Dbxref=NCBI_GP:EFD94540.1;Name=EFD94540.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;locus_tag=HMPREF0889_0609;product=glutamine amidotransferase%2C class I;protein_id=EFD94540.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 107149 108630 . - . ID=gene-HMPREF0889_0610;Name=HMPREF0889_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0610 GCA_000177555.1|ADGP01000009.1 Genbank CDS 107149 108630 . - 0 ID=cds-EFD94541.1;Parent=gene-HMPREF0889_0610;Dbxref=NCBI_GP:EFD94541.1;Name=EFD94541.1;Note=identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715;gbkey=CDS;locus_tag=HMPREF0889_0610;product=chorismate binding enzyme;protein_id=EFD94541.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank sequence_feature 108672 108908 . - . ID=id-ADGP01000009.1:108672..108908;Note=T-box leader;gbkey=misc_feature GCA_000177555.1|ADGP01000009.1 Genbank gene 109146 109221 . - . ID=gene-HMPREF0889_0613;Name=HMPREF0889_0613;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0613 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109146 109221 . - . ID=rna-HMPREF0889_0613;Parent=gene-HMPREF0889_0613;gbkey=tRNA;locus_tag=HMPREF0889_0613;product=tRNA-Val GCA_000177555.1|ADGP01000009.1 Genbank exon 109146 109221 . - . ID=exon-HMPREF0889_0613-1;Parent=rna-HMPREF0889_0613;gbkey=tRNA;locus_tag=HMPREF0889_0613;product=tRNA-Val GCA_000177555.1|ADGP01000009.1 Genbank gene 109227 109302 . - . ID=gene-HMPREF0889_0614;Name=HMPREF0889_0614;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0614 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109227 109302 . - . ID=rna-HMPREF0889_0614;Parent=gene-HMPREF0889_0614;gbkey=tRNA;locus_tag=HMPREF0889_0614;product=tRNA-Glu GCA_000177555.1|ADGP01000009.1 Genbank exon 109227 109302 . - . ID=exon-HMPREF0889_0614-1;Parent=rna-HMPREF0889_0614;gbkey=tRNA;locus_tag=HMPREF0889_0614;product=tRNA-Glu GCA_000177555.1|ADGP01000009.1 Genbank gene 109313 109388 . - . ID=gene-HMPREF0889_0615;Name=HMPREF0889_0615;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0615 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109313 109388 . - . ID=rna-HMPREF0889_0615;Parent=gene-HMPREF0889_0615;gbkey=tRNA;locus_tag=HMPREF0889_0615;product=tRNA-Lys GCA_000177555.1|ADGP01000009.1 Genbank exon 109313 109388 . - . ID=exon-HMPREF0889_0615-1;Parent=rna-HMPREF0889_0615;gbkey=tRNA;locus_tag=HMPREF0889_0615;product=tRNA-Lys GCA_000177555.1|ADGP01000009.1 Genbank gene 109400 109473 . - . ID=gene-HMPREF0889_0616;Name=HMPREF0889_0616;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0616 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109400 109473 . - . ID=rna-HMPREF0889_0616;Parent=gene-HMPREF0889_0616;gbkey=tRNA;locus_tag=HMPREF0889_0616;product=tRNA-Gln GCA_000177555.1|ADGP01000009.1 Genbank exon 109400 109473 . - . ID=exon-HMPREF0889_0616-1;Parent=rna-HMPREF0889_0616;gbkey=tRNA;locus_tag=HMPREF0889_0616;product=tRNA-Gln GCA_000177555.1|ADGP01000009.1 Genbank gene 109477 109552 . - . ID=gene-HMPREF0889_0617;Name=HMPREF0889_0617;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0617 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109477 109552 . - . ID=rna-HMPREF0889_0617;Parent=gene-HMPREF0889_0617;gbkey=tRNA;locus_tag=HMPREF0889_0617;product=tRNA-Asn GCA_000177555.1|ADGP01000009.1 Genbank exon 109477 109552 . - . ID=exon-HMPREF0889_0617-1;Parent=rna-HMPREF0889_0617;gbkey=tRNA;locus_tag=HMPREF0889_0617;product=tRNA-Asn GCA_000177555.1|ADGP01000009.1 Genbank gene 109558 109632 . - . ID=gene-HMPREF0889_0618;Name=HMPREF0889_0618;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0618 GCA_000177555.1|ADGP01000009.1 Genbank tRNA 109558 109632 . - . ID=rna-HMPREF0889_0618;Parent=gene-HMPREF0889_0618;gbkey=tRNA;locus_tag=HMPREF0889_0618;product=tRNA-Gly GCA_000177555.1|ADGP01000009.1 Genbank exon 109558 109632 . - . ID=exon-HMPREF0889_0618-1;Parent=rna-HMPREF0889_0618;gbkey=tRNA;locus_tag=HMPREF0889_0618;product=tRNA-Gly GCA_000177555.1|ADGP01000009.1 Genbank gene 110327 111571 . + . ID=gene-HMPREF0889_0619;Name=HMPREF0889_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0619 GCA_000177555.1|ADGP01000009.1 Genbank CDS 110327 111571 . + 0 ID=cds-EFD94542.1;Parent=gene-HMPREF0889_0619;Dbxref=NCBI_GP:EFD94542.1;Name=EFD94542.1;Note=identified by match to protein family HMM TIGR01714;gbkey=CDS;locus_tag=HMPREF0889_0619;product=phage replisome organizer N-terminal domain protein;protein_id=EFD94542.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 111681 111878 . + . ID=gene-HMPREF0889_0620;Name=HMPREF0889_0620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0620 GCA_000177555.1|ADGP01000009.1 Genbank CDS 111681 111878 . + 0 ID=cds-EFD94543.1;Parent=gene-HMPREF0889_0620;Dbxref=NCBI_GP:EFD94543.1;Name=EFD94543.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0620;product=hypothetical protein;protein_id=EFD94543.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 111911 112150 . + . ID=gene-HMPREF0889_0621;Name=HMPREF0889_0621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0621 GCA_000177555.1|ADGP01000009.1 Genbank CDS 111911 112150 . + 0 ID=cds-EFD94544.1;Parent=gene-HMPREF0889_0621;Dbxref=NCBI_GP:EFD94544.1;Name=EFD94544.1;gbkey=CDS;locus_tag=HMPREF0889_0621;product=hypothetical protein;protein_id=EFD94544.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 112219 112938 . - . ID=gene-HMPREF0889_0622;Name=HMPREF0889_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0622 GCA_000177555.1|ADGP01000009.1 Genbank CDS 112219 112938 . - 0 ID=cds-EFD94545.1;Parent=gene-HMPREF0889_0622;Dbxref=NCBI_GP:EFD94545.1;Name=EFD94545.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF02308;gbkey=CDS;locus_tag=HMPREF0889_0622;product=ACT domain protein;protein_id=EFD94545.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 113105 115249 . + . ID=gene-HMPREF0889_0623;Name=HMPREF0889_0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0623 GCA_000177555.1|ADGP01000009.1 Genbank CDS 113105 115249 . + 0 ID=cds-EFD94546.1;Parent=gene-HMPREF0889_0623;Dbxref=NCBI_GP:EFD94546.1;Name=EFD94546.1;Note=identified by match to protein family HMM PF02366%3B match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF0889_0623;product=dolichyl-phosphate-mannose-protein mannosyltransferase;protein_id=EFD94546.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 115261 116865 . + . ID=gene-HMPREF0889_0624;Name=HMPREF0889_0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0624 GCA_000177555.1|ADGP01000009.1 Genbank CDS 115261 116865 . + 0 ID=cds-EFD94547.1;Parent=gene-HMPREF0889_0624;Dbxref=NCBI_GP:EFD94547.1;Name=EFD94547.1;Note=identified by match to protein family HMM PF02366;gbkey=CDS;locus_tag=HMPREF0889_0624;product=dolichyl-phosphate-mannose-protein mannosyltransferase;protein_id=EFD94547.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 116878 117585 . + . ID=gene-HMPREF0889_0625;Name=HMPREF0889_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0625 GCA_000177555.1|ADGP01000009.1 Genbank CDS 116878 117585 . + 0 ID=cds-EFD94548.1;Parent=gene-HMPREF0889_0625;Dbxref=NCBI_GP:EFD94548.1;Name=EFD94548.1;gbkey=CDS;locus_tag=HMPREF0889_0625;product=hypothetical protein;protein_id=EFD94548.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 117582 117764 . + . ID=gene-HMPREF0889_0626;Name=HMPREF0889_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0626 GCA_000177555.1|ADGP01000009.1 Genbank CDS 117582 117764 . + 0 ID=cds-EFD94549.1;Parent=gene-HMPREF0889_0626;Dbxref=NCBI_GP:EFD94549.1;Name=EFD94549.1;gbkey=CDS;locus_tag=HMPREF0889_0626;product=hypothetical protein;protein_id=EFD94549.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 117757 122322 . + . ID=gene-HMPREF0889_0627;Name=HMPREF0889_0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0627 GCA_000177555.1|ADGP01000009.1 Genbank CDS 117757 122322 . + 0 ID=cds-EFD94550.1;Parent=gene-HMPREF0889_0627;Dbxref=NCBI_GP:EFD94550.1;Name=EFD94550.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01493%3B match to protein family HMM PF01645%3B match to protein family HMM PF04898;gbkey=CDS;locus_tag=HMPREF0889_0627;product=class II glutamine amidotransferase;protein_id=EFD94550.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 122372 122602 . - . ID=gene-HMPREF0889_0628;Name=HMPREF0889_0628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0628 GCA_000177555.1|ADGP01000009.1 Genbank CDS 122372 122602 . - 0 ID=cds-EFD94551.1;Parent=gene-HMPREF0889_0628;Dbxref=NCBI_GP:EFD94551.1;Name=EFD94551.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0628;product=hypothetical protein;protein_id=EFD94551.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 122791 123687 . + . ID=gene-HMPREF0889_0629;Name=HMPREF0889_0629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0629 GCA_000177555.1|ADGP01000009.1 Genbank CDS 122791 123687 . + 0 ID=cds-EFD94552.1;Parent=gene-HMPREF0889_0629;Dbxref=NCBI_GP:EFD94552.1;Name=EFD94552.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF0889_0629;product=putative membrane protein;protein_id=EFD94552.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 123768 123914 . + . ID=gene-HMPREF0889_0630;Name=HMPREF0889_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0630 GCA_000177555.1|ADGP01000009.1 Genbank CDS 123768 123914 . + 0 ID=cds-EFD94553.1;Parent=gene-HMPREF0889_0630;Dbxref=NCBI_GP:EFD94553.1;Name=EFD94553.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_0630;product=hypothetical protein;protein_id=EFD94553.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 123940 124077 . + . ID=gene-HMPREF0889_0631;Name=HMPREF0889_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0631 GCA_000177555.1|ADGP01000009.1 Genbank CDS 123940 124077 . + 0 ID=cds-EFD94554.1;Parent=gene-HMPREF0889_0631;Dbxref=NCBI_GP:EFD94554.1;Name=EFD94554.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF0889_0631;product=hypothetical protein;protein_id=EFD94554.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 124202 125089 . + . ID=gene-HMPREF0889_0632;Name=HMPREF0889_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0632 GCA_000177555.1|ADGP01000009.1 Genbank CDS 124202 125089 . + 0 ID=cds-EFD94555.1;Parent=gene-HMPREF0889_0632;Dbxref=NCBI_GP:EFD94555.1;Name=EFD94555.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_0632;product=radical SAM domain protein;protein_id=EFD94555.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 125136 126365 . - . ID=gene-HMPREF0889_0633;Name=HMPREF0889_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0633 GCA_000177555.1|ADGP01000009.1 Genbank CDS 125136 126365 . - 0 ID=cds-EFD94556.1;Parent=gene-HMPREF0889_0633;Dbxref=NCBI_GP:EFD94556.1;Name=EFD94556.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_0633;product=aminotransferase%2C class I/II;protein_id=EFD94556.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 126435 127436 . - . ID=gene-HMPREF0889_0634;Name=HMPREF0889_0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0634 GCA_000177555.1|ADGP01000009.1 Genbank CDS 126435 127436 . - 0 ID=cds-EFD94557.1;Parent=gene-HMPREF0889_0634;Dbxref=NCBI_GP:EFD94557.1;Name=EFD94557.1;Note=identified by match to protein family HMM PF02277;gbkey=CDS;locus_tag=HMPREF0889_0634;product=putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=EFD94557.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 127583 128626 . - . ID=gene-HMPREF0889_0635;Name=HMPREF0889_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0635 GCA_000177555.1|ADGP01000009.1 Genbank CDS 127583 128626 . - 0 ID=cds-EFD94558.1;Parent=gene-HMPREF0889_0635;Dbxref=NCBI_GP:EFD94558.1;Name=EFD94558.1;Note=identified by match to protein family HMM PF00465%3B match to protein family HMM PF01761;gbkey=CDS;locus_tag=HMPREF0889_0635;product=3-dehydroquinate synthase;protein_id=EFD94558.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 129025 130911 . + . ID=gene-HMPREF0889_0636;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0636 GCA_000177555.1|ADGP01000009.1 Genbank CDS 129025 130911 . + 0 ID=cds-EFD94559.1;Parent=gene-HMPREF0889_0636;Dbxref=NCBI_GP:EFD94559.1;Name=EFD94559.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;gene=cstA;locus_tag=HMPREF0889_0636;product=carbon starvation protein CstA;protein_id=EFD94559.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 131045 131275 . - . ID=gene-HMPREF0889_0637;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0637 GCA_000177555.1|ADGP01000009.1 Genbank CDS 131045 131275 . - 0 ID=cds-EFD94560.1;Parent=gene-HMPREF0889_0637;Dbxref=NCBI_GP:EFD94560.1;Name=EFD94560.1;Note=identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165;gbkey=CDS;gene=rpsR;locus_tag=HMPREF0889_0637;product=ribosomal protein S18;protein_id=EFD94560.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 131319 131732 . - . ID=gene-HMPREF0889_0638;Name=HMPREF0889_0638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0638 GCA_000177555.1|ADGP01000009.1 Genbank CDS 131319 131732 . - 0 ID=cds-EFD94561.1;Parent=gene-HMPREF0889_0638;Dbxref=NCBI_GP:EFD94561.1;Name=EFD94561.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;locus_tag=HMPREF0889_0638;product=single-strand binding family protein;protein_id=EFD94561.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 131749 132033 . - . ID=gene-HMPREF0889_0639;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0639 GCA_000177555.1|ADGP01000009.1 Genbank CDS 131749 132033 . - 0 ID=cds-EFD94562.1;Parent=gene-HMPREF0889_0639;Dbxref=NCBI_GP:EFD94562.1;Name=EFD94562.1;Note=identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166;gbkey=CDS;gene=rpsF;locus_tag=HMPREF0889_0639;product=ribosomal protein S6;protein_id=EFD94562.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 132150 135893 . - . ID=gene-HMPREF0889_0640;Name=HMPREF0889_0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0640 GCA_000177555.1|ADGP01000009.1 Genbank CDS 132150 135893 . - 0 ID=cds-EFD94563.1;Parent=gene-HMPREF0889_0640;Dbxref=NCBI_GP:EFD94563.1;Name=EFD94563.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01857;gbkey=CDS;locus_tag=HMPREF0889_0640;product=phosphoribosylformylglycinamidine synthase;protein_id=EFD94563.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 136105 136701 . + . ID=gene-HMPREF0889_0641;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=HMPREF0889_0641 GCA_000177555.1|ADGP01000009.1 Genbank CDS 136105 136701 . + 0 ID=cds-EFD94564.1;Parent=gene-HMPREF0889_0641;Dbxref=NCBI_GP:EFD94564.1;Name=EFD94564.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744;gbkey=CDS;gene=xpt;locus_tag=HMPREF0889_0641;product=xanthine phosphoribosyltransferase;protein_id=EFD94564.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 136698 136877 . + . ID=gene-HMPREF0889_0642;Name=HMPREF0889_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0642 GCA_000177555.1|ADGP01000009.1 Genbank CDS 136698 136877 . + 0 ID=cds-EFD94565.1;Parent=gene-HMPREF0889_0642;Dbxref=NCBI_GP:EFD94565.1;Name=EFD94565.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0642;product=hypothetical protein;protein_id=EFD94565.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 136880 137308 . + . ID=gene-HMPREF0889_0643;Name=HMPREF0889_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0643 GCA_000177555.1|ADGP01000009.1 Genbank CDS 136880 137308 . + 0 ID=cds-EFD94566.1;Parent=gene-HMPREF0889_0643;Dbxref=NCBI_GP:EFD94566.1;Name=EFD94566.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0643;product=hypothetical protein;protein_id=EFD94566.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 137369 138715 . - . ID=gene-HMPREF0889_0644;Name=HMPREF0889_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0644 GCA_000177555.1|ADGP01000009.1 Genbank CDS 137369 138715 . - 0 ID=cds-EFD94567.1;Parent=gene-HMPREF0889_0644;Dbxref=NCBI_GP:EFD94567.1;Name=EFD94567.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF0889_0644;product=butyryl-CoA:acetate CoA-transferase;protein_id=EFD94567.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 138831 140120 . - . ID=gene-HMPREF0889_0645;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=HMPREF0889_0645 GCA_000177555.1|ADGP01000009.1 Genbank CDS 138831 140120 . - 0 ID=cds-EFD94568.1;Parent=gene-HMPREF0889_0645;Dbxref=NCBI_GP:EFD94568.1;Name=EFD94568.1;Note=identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395;gbkey=CDS;gene=rpoN;locus_tag=HMPREF0889_0645;product=RNA polymerase sigma-54 factor;protein_id=EFD94568.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 140388 141335 . - . ID=gene-HMPREF0889_0646;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0646 GCA_000177555.1|ADGP01000009.1 Genbank CDS 140388 141335 . - 0 ID=cds-EFD94569.1;Parent=gene-HMPREF0889_0646;Dbxref=NCBI_GP:EFD94569.1;Name=EFD94569.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF0889_0646;product=4-phosphoerythronate dehydrogenase;protein_id=EFD94569.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 141455 142009 . - . ID=gene-HMPREF0889_0647;Name=HMPREF0889_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0647 GCA_000177555.1|ADGP01000009.1 Genbank CDS 141455 142009 . - 0 ID=cds-EFD94570.1;Parent=gene-HMPREF0889_0647;Dbxref=NCBI_GP:EFD94570.1;Name=EFD94570.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=HMPREF0889_0647;product=DNA polymerase III%2C epsilon subunit;protein_id=EFD94570.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 142082 142810 . + . ID=gene-HMPREF0889_0648;Name=HMPREF0889_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0648 GCA_000177555.1|ADGP01000009.1 Genbank CDS 142082 142810 . + 0 ID=cds-EFD94571.1;Parent=gene-HMPREF0889_0648;Dbxref=NCBI_GP:EFD94571.1;Name=EFD94571.1;Note=identified by match to protein family HMM PF01863;gbkey=CDS;locus_tag=HMPREF0889_0648;product=hypothetical protein;protein_id=EFD94571.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 142863 143789 . - . ID=gene-HMPREF0889_0649;Name=HMPREF0889_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0649 GCA_000177555.1|ADGP01000009.1 Genbank CDS 142863 143789 . - 0 ID=cds-EFD94572.1;Parent=gene-HMPREF0889_0649;Dbxref=NCBI_GP:EFD94572.1;Name=EFD94572.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF0889_0649;product=peptidase%2C M23 family;protein_id=EFD94572.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 143808 144335 . - . ID=gene-HMPREF0889_0650;Name=HMPREF0889_0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0650 GCA_000177555.1|ADGP01000009.1 Genbank CDS 143808 144335 . - 0 ID=cds-EFD94573.1;Parent=gene-HMPREF0889_0650;Dbxref=NCBI_GP:EFD94573.1;Name=EFD94573.1;gbkey=CDS;locus_tag=HMPREF0889_0650;product=hypothetical protein;protein_id=EFD94573.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 144377 145294 . - . ID=gene-HMPREF0889_0651;Name=HMPREF0889_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0651 GCA_000177555.1|ADGP01000009.1 Genbank CDS 144377 145294 . - 0 ID=cds-EFD94574.1;Parent=gene-HMPREF0889_0651;Dbxref=NCBI_GP:EFD94574.1;Name=EFD94574.1;Note=identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;locus_tag=HMPREF0889_0651;product=ParB-like protein;protein_id=EFD94574.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 145284 146060 . - . ID=gene-HMPREF0889_0652;Name=soj;gbkey=Gene;gene=soj;gene_biotype=protein_coding;locus_tag=HMPREF0889_0652 GCA_000177555.1|ADGP01000009.1 Genbank CDS 145284 146060 . - 0 ID=cds-EFD94575.1;Parent=gene-HMPREF0889_0652;Dbxref=NCBI_GP:EFD94575.1;Name=EFD94575.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;gene=soj;locus_tag=HMPREF0889_0652;product=sporulation initiation inhibitor protein Soj;protein_id=EFD94575.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 146238 146894 . + . ID=gene-HMPREF0889_0653;Name=HMPREF0889_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0653 GCA_000177555.1|ADGP01000009.1 Genbank CDS 146238 146894 . + 0 ID=cds-EFD94576.1;Parent=gene-HMPREF0889_0653;Dbxref=NCBI_GP:EFD94576.1;Name=EFD94576.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0653;product=hypothetical protein;protein_id=EFD94576.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 147064 148347 . - . ID=gene-HMPREF0889_0654;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0654 GCA_000177555.1|ADGP01000009.1 Genbank CDS 147064 148347 . - 0 ID=cds-EFD94577.1;Parent=gene-HMPREF0889_0654;Dbxref=NCBI_GP:EFD94577.1;Name=EFD94577.1;Note=identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184;gbkey=CDS;gene=purA;locus_tag=HMPREF0889_0654;product=adenylosuccinate synthase;protein_id=EFD94577.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 148573 149679 . + . ID=gene-HMPREF0889_0655;Name=HMPREF0889_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0655 GCA_000177555.1|ADGP01000009.1 Genbank CDS 148573 149679 . + 0 ID=cds-EFD94578.1;Parent=gene-HMPREF0889_0655;Dbxref=NCBI_GP:EFD94578.1;Name=EFD94578.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;locus_tag=HMPREF0889_0655;product=oxidoreductase%2C FAD/FMN-binding protein;protein_id=EFD94578.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 149764 150429 . + . ID=gene-HMPREF0889_0656;Name=HMPREF0889_0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0656 GCA_000177555.1|ADGP01000009.1 Genbank CDS 149764 150429 . + 0 ID=cds-EFD94579.1;Parent=gene-HMPREF0889_0656;Dbxref=NCBI_GP:EFD94579.1;Name=EFD94579.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0656;product=hypothetical protein;protein_id=EFD94579.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 150422 150829 . + . ID=gene-HMPREF0889_0657;Name=HMPREF0889_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0657 GCA_000177555.1|ADGP01000009.1 Genbank CDS 150422 150829 . + 0 ID=cds-EFD94580.1;Parent=gene-HMPREF0889_0657;Dbxref=NCBI_GP:EFD94580.1;Name=EFD94580.1;Note=identified by match to protein family HMM PF09579;gbkey=CDS;locus_tag=HMPREF0889_0657;product=sporulation protein YtfJ;protein_id=EFD94580.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 150943 151371 . + . ID=gene-HMPREF0889_0658;Name=HMPREF0889_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0658 GCA_000177555.1|ADGP01000009.1 Genbank CDS 150943 151371 . + 0 ID=cds-EFD94581.1;Parent=gene-HMPREF0889_0658;Dbxref=NCBI_GP:EFD94581.1;Name=EFD94581.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF0889_0658;product=outer membrane protein;protein_id=EFD94581.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 151526 151813 . + . ID=gene-HMPREF0889_0659;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0659 GCA_000177555.1|ADGP01000009.1 Genbank CDS 151526 151813 . + 0 ID=cds-EFD94582.1;Parent=gene-HMPREF0889_0659;Dbxref=NCBI_GP:EFD94582.1;Name=EFD94582.1;Note=identified by match to protein family HMM PF02583;gbkey=CDS;gene=csoR;locus_tag=HMPREF0889_0659;product=copper-sensing transcriptional repressor CsoR;protein_id=EFD94582.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 151823 154594 . + . ID=gene-HMPREF0889_0660;Name=HMPREF0889_0660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0660 GCA_000177555.1|ADGP01000009.1 Genbank CDS 151823 154594 . + 0 ID=cds-EFD94583.1;Parent=gene-HMPREF0889_0660;Dbxref=NCBI_GP:EFD94583.1;Name=EFD94583.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF0889_0660;product=copper-exporting ATPase;protein_id=EFD94583.1;transl_table=11 GCA_000177555.1|ADGP01000009.1 Genbank gene 154674 159128 . - . ID=gene-HMPREF0889_0661;Name=HMPREF0889_0661;end_range=159128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0661;partial=true GCA_000177555.1|ADGP01000009.1 Genbank CDS 154674 159128 . - 0 ID=cds-EFD94584.1;Parent=gene-HMPREF0889_0661;Dbxref=NCBI_GP:EFD94584.1;Name=EFD94584.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;end_range=159128,.;gbkey=CDS;locus_tag=HMPREF0889_0661;partial=true;product=hemagglutinin;protein_id=EFD94584.1;transl_table=11 ##sequence-region ADGP01000008.1 1 102716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000008.1 Genbank region 1 102716 . + . ID=ADGP01000008.1:1..102716;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000008.1 Genbank gene 592 777 . + . ID=gene-HMPREF0889_0001;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0001 GCA_000177555.1|ADGP01000008.1 Genbank CDS 592 777 . + 0 ID=cds-EFD94585.1;Parent=gene-HMPREF0889_0001;Dbxref=NCBI_GP:EFD94585.1;Name=EFD94585.1;Note=identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031;gbkey=CDS;gene=rpmF;locus_tag=HMPREF0889_0001;product=ribosomal protein L32;protein_id=EFD94585.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 911 1411 . + . ID=gene-HMPREF0889_0002;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0002 GCA_000177555.1|ADGP01000008.1 Genbank CDS 911 1411 . + 0 ID=cds-EFD94586.1;Parent=gene-HMPREF0889_0002;Dbxref=NCBI_GP:EFD94586.1;Name=EFD94586.1;Note=identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228;gbkey=CDS;gene=ruvC;locus_tag=HMPREF0889_0002;product=crossover junction endodeoxyribonuclease RuvC;protein_id=EFD94586.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 1408 2010 . + . ID=gene-HMPREF0889_0003;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0003 GCA_000177555.1|ADGP01000008.1 Genbank CDS 1408 2010 . + 0 ID=cds-EFD94587.1;Parent=gene-HMPREF0889_0003;Dbxref=NCBI_GP:EFD94587.1;Name=EFD94587.1;Note=identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084;gbkey=CDS;gene=ruvA;locus_tag=HMPREF0889_0003;product=Holliday junction DNA helicase RuvA;protein_id=EFD94587.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 2013 3029 . + . ID=gene-HMPREF0889_0004;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0004 GCA_000177555.1|ADGP01000008.1 Genbank CDS 2013 3029 . + 0 ID=cds-EFD94588.1;Parent=gene-HMPREF0889_0004;Dbxref=NCBI_GP:EFD94588.1;Name=EFD94588.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635;gbkey=CDS;gene=ruvB;locus_tag=HMPREF0889_0004;product=Holliday junction DNA helicase RuvB;protein_id=EFD94588.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 3068 4309 . + . ID=gene-HMPREF0889_0005;Name=HMPREF0889_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0005 GCA_000177555.1|ADGP01000008.1 Genbank CDS 3068 4309 . + 0 ID=cds-EFD94589.1;Parent=gene-HMPREF0889_0005;Dbxref=NCBI_GP:EFD94589.1;Name=EFD94589.1;Note=identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669;gbkey=CDS;locus_tag=HMPREF0889_0005;product=SpoIID/LytB domain protein;protein_id=EFD94589.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 4323 5342 . + . ID=gene-HMPREF0889_0006;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0006 GCA_000177555.1|ADGP01000008.1 Genbank CDS 4323 5342 . + 0 ID=cds-EFD94590.1;Parent=gene-HMPREF0889_0006;Dbxref=NCBI_GP:EFD94590.1;Name=EFD94590.1;Note=identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113;gbkey=CDS;gene=queA;locus_tag=HMPREF0889_0006;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=EFD94590.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 5355 6461 . + . ID=gene-HMPREF0889_0007;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HMPREF0889_0007 GCA_000177555.1|ADGP01000008.1 Genbank CDS 5355 6461 . + 0 ID=cds-EFD94591.1;Parent=gene-HMPREF0889_0007;Dbxref=NCBI_GP:EFD94591.1;Name=EFD94591.1;Note=identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449;gbkey=CDS;gene=tgt;locus_tag=HMPREF0889_0007;product=tRNA-guanine transglycosylase;protein_id=EFD94591.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 6689 6958 . + . ID=gene-HMPREF0889_0008;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0008 GCA_000177555.1|ADGP01000008.1 Genbank CDS 6689 6958 . + 0 ID=cds-EFD94592.1;Parent=gene-HMPREF0889_0008;Dbxref=NCBI_GP:EFD94592.1;Name=EFD94592.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC;locus_tag=HMPREF0889_0008;product=preprotein translocase%2C YajC subunit;protein_id=EFD94592.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 6963 7532 . + . ID=gene-HMPREF0889_0009;Name=HMPREF0889_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0009 GCA_000177555.1|ADGP01000008.1 Genbank CDS 6963 7532 . + 0 ID=cds-EFD94593.1;Parent=gene-HMPREF0889_0009;Dbxref=NCBI_GP:EFD94593.1;Name=EFD94593.1;Note=identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727;gbkey=CDS;locus_tag=HMPREF0889_0009;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=EFD94593.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 7557 8858 . + . ID=gene-HMPREF0889_0010;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0010 GCA_000177555.1|ADGP01000008.1 Genbank CDS 7557 8858 . + 0 ID=cds-EFD94594.1;Parent=gene-HMPREF0889_0010;Dbxref=NCBI_GP:EFD94594.1;Name=EFD94594.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD;locus_tag=HMPREF0889_0010;product=export membrane protein SecD;protein_id=EFD94594.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 8855 9814 . + . ID=gene-HMPREF0889_0011;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0011 GCA_000177555.1|ADGP01000008.1 Genbank CDS 8855 9814 . + 0 ID=cds-EFD94595.1;Parent=gene-HMPREF0889_0011;Dbxref=NCBI_GP:EFD94595.1;Name=EFD94595.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF;locus_tag=HMPREF0889_0011;product=export membrane protein SecF;protein_id=EFD94595.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 9850 10224 . + . ID=gene-HMPREF0889_0012;Name=HMPREF0889_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0012 GCA_000177555.1|ADGP01000008.1 Genbank CDS 9850 10224 . + 0 ID=cds-EFD94596.1;Parent=gene-HMPREF0889_0012;Dbxref=NCBI_GP:EFD94596.1;Name=EFD94596.1;gbkey=CDS;locus_tag=HMPREF0889_0012;product=hypothetical protein;protein_id=EFD94596.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 10346 10885 . + . ID=gene-HMPREF0889_0013;Name=HMPREF0889_0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0013 GCA_000177555.1|ADGP01000008.1 Genbank CDS 10346 10885 . + 0 ID=cds-EFD94597.1;Parent=gene-HMPREF0889_0013;Dbxref=NCBI_GP:EFD94597.1;Name=EFD94597.1;Note=identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=HMPREF0889_0013;product=BioY family protein;protein_id=EFD94597.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 10986 11693 . + . ID=gene-HMPREF0889_0014;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0014 GCA_000177555.1|ADGP01000008.1 Genbank CDS 10986 11693 . + 0 ID=cds-EFD94598.1;Parent=gene-HMPREF0889_0014;Dbxref=NCBI_GP:EFD94598.1;Name=EFD94598.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107;gbkey=CDS;gene=deoD;locus_tag=HMPREF0889_0014;product=purine nucleoside phosphorylase;protein_id=EFD94598.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 11708 12037 . + . ID=gene-HMPREF0889_0015;Name=HMPREF0889_0015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0015 GCA_000177555.1|ADGP01000008.1 Genbank CDS 11708 12037 . + 0 ID=cds-EFD94599.1;Parent=gene-HMPREF0889_0015;Dbxref=NCBI_GP:EFD94599.1;Name=EFD94599.1;Note=identified by match to protein family HMM PF01242;gbkey=CDS;locus_tag=HMPREF0889_0015;product=putative queuosine biosynthesis protein QueD;protein_id=EFD94599.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 12027 12659 . + . ID=gene-HMPREF0889_0016;Name=HMPREF0889_0016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0016 GCA_000177555.1|ADGP01000008.1 Genbank CDS 12027 12659 . + 0 ID=cds-EFD94600.1;Parent=gene-HMPREF0889_0016;Dbxref=NCBI_GP:EFD94600.1;Name=EFD94600.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_0016;product=putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=EFD94600.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 12805 13638 . + . ID=gene-HMPREF0889_0017;Name=HMPREF0889_0017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0017 GCA_000177555.1|ADGP01000008.1 Genbank CDS 12805 13638 . + 0 ID=cds-EFD94601.1;Parent=gene-HMPREF0889_0017;Dbxref=NCBI_GP:EFD94601.1;Name=EFD94601.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;locus_tag=HMPREF0889_0017;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=EFD94601.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 13642 14649 . + . ID=gene-HMPREF0889_0018;Name=HMPREF0889_0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0018 GCA_000177555.1|ADGP01000008.1 Genbank CDS 13642 14649 . + 0 ID=cds-EFD94602.1;Parent=gene-HMPREF0889_0018;Dbxref=NCBI_GP:EFD94602.1;Name=EFD94602.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF0889_0018;product=transcriptional regulator%2C AraC family;protein_id=EFD94602.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 14721 15545 . - . ID=gene-HMPREF0889_0019;Name=HMPREF0889_0019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0019 GCA_000177555.1|ADGP01000008.1 Genbank CDS 14721 15545 . - 0 ID=cds-EFD94603.1;Parent=gene-HMPREF0889_0019;Dbxref=NCBI_GP:EFD94603.1;Name=EFD94603.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=HMPREF0889_0019;product=Cof-like hydrolase;protein_id=EFD94603.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 15620 17128 . + . ID=gene-HMPREF0889_0020;Name=HMPREF0889_0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0020 GCA_000177555.1|ADGP01000008.1 Genbank CDS 15620 17128 . + 0 ID=cds-EFD94604.1;Parent=gene-HMPREF0889_0020;Dbxref=NCBI_GP:EFD94604.1;Name=EFD94604.1;Note=identified by match to protein family HMM PF02878%3B match to protein family HMM PF02879;gbkey=CDS;locus_tag=HMPREF0889_0020;product=phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;protein_id=EFD94604.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 17510 18421 . - . ID=gene-HMPREF0889_0021;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0021 GCA_000177555.1|ADGP01000008.1 Genbank CDS 17510 18421 . - 0 ID=cds-EFD94605.1;Parent=gene-HMPREF0889_0021;Dbxref=NCBI_GP:EFD94605.1;Name=EFD94605.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;gene=lysR;locus_tag=HMPREF0889_0021;product=LysR substrate binding domain protein;protein_id=EFD94605.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 18867 22388 . + . ID=gene-HMPREF0889_0022;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0022 GCA_000177555.1|ADGP01000008.1 Genbank CDS 18867 22388 . + 0 ID=cds-EFD94606.1;Parent=gene-HMPREF0889_0022;Dbxref=NCBI_GP:EFD94606.1;Name=EFD94606.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF0889_0022;product=pyruvate synthase;protein_id=EFD94606.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 22558 23028 . + . ID=gene-HMPREF0889_0023;Name=HMPREF0889_0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0023 GCA_000177555.1|ADGP01000008.1 Genbank CDS 22558 23028 . + 0 ID=cds-EFD94607.1;Parent=gene-HMPREF0889_0023;Dbxref=NCBI_GP:EFD94607.1;Name=EFD94607.1;gbkey=CDS;locus_tag=HMPREF0889_0023;product=hypothetical protein;protein_id=EFD94607.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 23107 23652 . - . ID=gene-HMPREF0889_0024;Name=HMPREF0889_0024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0024 GCA_000177555.1|ADGP01000008.1 Genbank CDS 23107 23652 . - 0 ID=cds-EFD94608.1;Parent=gene-HMPREF0889_0024;Dbxref=NCBI_GP:EFD94608.1;Name=EFD94608.1;Note=identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF0889_0024;product=rubredoxin;protein_id=EFD94608.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 23937 25409 . + . ID=gene-HMPREF0889_0025;Name=HMPREF0889_0025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0025 GCA_000177555.1|ADGP01000008.1 Genbank CDS 23937 25409 . + 0 ID=cds-EFD94609.1;Parent=gene-HMPREF0889_0025;Dbxref=NCBI_GP:EFD94609.1;Name=EFD94609.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0025;product=hypothetical protein;protein_id=EFD94609.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 25465 26802 . + . ID=gene-HMPREF0889_0026;Name=HMPREF0889_0026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0026 GCA_000177555.1|ADGP01000008.1 Genbank CDS 25465 26802 . + 0 ID=cds-EFD94610.1;Parent=gene-HMPREF0889_0026;Dbxref=NCBI_GP:EFD94610.1;Name=EFD94610.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0026;product=hypothetical protein;protein_id=EFD94610.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 27367 27942 . + . ID=gene-HMPREF0889_0027;Name=HMPREF0889_0027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0027 GCA_000177555.1|ADGP01000008.1 Genbank CDS 27367 27942 . + 0 ID=cds-EFD94611.1;Parent=gene-HMPREF0889_0027;Dbxref=NCBI_GP:EFD94611.1;Name=EFD94611.1;gbkey=CDS;locus_tag=HMPREF0889_0027;product=hypothetical protein;protein_id=EFD94611.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 28000 29244 . + . ID=gene-HMPREF0889_0028;Name=HMPREF0889_0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0028 GCA_000177555.1|ADGP01000008.1 Genbank CDS 28000 29244 . + 0 ID=cds-EFD94612.1;Parent=gene-HMPREF0889_0028;Dbxref=NCBI_GP:EFD94612.1;Name=EFD94612.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;locus_tag=HMPREF0889_0028;product=putative dGTPase;protein_id=EFD94612.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 29257 29484 . + . ID=gene-HMPREF0889_0029;Name=HMPREF0889_0029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0029 GCA_000177555.1|ADGP01000008.1 Genbank CDS 29257 29484 . + 0 ID=cds-EFD94613.1;Parent=gene-HMPREF0889_0029;Dbxref=NCBI_GP:EFD94613.1;Name=EFD94613.1;Note=identified by match to protein family HMM PF07866;gbkey=CDS;locus_tag=HMPREF0889_0029;product=hypothetical protein;protein_id=EFD94613.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 29562 29768 . - . ID=gene-HMPREF0889_0030;Name=HMPREF0889_0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0030 GCA_000177555.1|ADGP01000008.1 Genbank CDS 29562 29768 . - 0 ID=cds-EFD94614.1;Parent=gene-HMPREF0889_0030;Dbxref=NCBI_GP:EFD94614.1;Name=EFD94614.1;Note=identified by match to protein family HMM PF08984;gbkey=CDS;locus_tag=HMPREF0889_0030;product=hydrid cluster protein-associated redox disulfide domain protein;protein_id=EFD94614.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 30010 30441 . + . ID=gene-HMPREF0889_0031;Name=HMPREF0889_0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0031 GCA_000177555.1|ADGP01000008.1 Genbank CDS 30010 30441 . + 0 ID=cds-EFD94615.1;Parent=gene-HMPREF0889_0031;Dbxref=NCBI_GP:EFD94615.1;Name=EFD94615.1;Note=identified by match to protein family HMM PF09148;gbkey=CDS;locus_tag=HMPREF0889_0031;product=hypothetical protein;protein_id=EFD94615.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 30441 32105 . + . ID=gene-HMPREF0889_0032;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0032 GCA_000177555.1|ADGP01000008.1 Genbank CDS 30441 32105 . + 0 ID=cds-EFD94616.1;Parent=gene-HMPREF0889_0032;Dbxref=NCBI_GP:EFD94616.1;Name=EFD94616.1;Note=identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;locus_tag=HMPREF0889_0032;product=arginine--tRNA ligase;protein_id=EFD94616.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 32168 33787 . + . ID=gene-HMPREF0889_0033;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0033 GCA_000177555.1|ADGP01000008.1 Genbank CDS 32168 33787 . + 0 ID=cds-EFD94617.1;Parent=gene-HMPREF0889_0033;Dbxref=NCBI_GP:EFD94617.1;Name=EFD94617.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337;gbkey=CDS;gene=pyrG;locus_tag=HMPREF0889_0033;product=CTP synthase;protein_id=EFD94617.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 34398 35738 . + . ID=gene-HMPREF0889_0034;Name=rnfC;gbkey=Gene;gene=rnfC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0034 GCA_000177555.1|ADGP01000008.1 Genbank CDS 34398 35738 . + 0 ID=cds-EFD94618.1;Parent=gene-HMPREF0889_0034;Dbxref=NCBI_GP:EFD94618.1;Name=EFD94618.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512%3B match to protein family HMM TIGR01945;gbkey=CDS;gene=rnfC;locus_tag=HMPREF0889_0034;product=electron transport complex%2C RnfABCDGE type%2C C subunit;protein_id=EFD94618.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 35767 36792 . + . ID=gene-HMPREF0889_0035;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0035 GCA_000177555.1|ADGP01000008.1 Genbank CDS 35767 36792 . + 0 ID=cds-EFD94619.1;Parent=gene-HMPREF0889_0035;Dbxref=NCBI_GP:EFD94619.1;Name=EFD94619.1;Note=identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01946;gbkey=CDS;gene=rnfD;locus_tag=HMPREF0889_0035;product=electron transport complex%2C RnfABCDGE type%2C D subunit;protein_id=EFD94619.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 36794 37348 . + . ID=gene-HMPREF0889_0036;Name=rnfG;gbkey=Gene;gene=rnfG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0036 GCA_000177555.1|ADGP01000008.1 Genbank CDS 36794 37348 . + 0 ID=cds-EFD94620.1;Parent=gene-HMPREF0889_0036;Dbxref=NCBI_GP:EFD94620.1;Name=EFD94620.1;Note=identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01947;gbkey=CDS;gene=rnfG;locus_tag=HMPREF0889_0036;product=electron transport complex%2C RnfABCDGE type%2C G subunit;protein_id=EFD94620.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 37348 37971 . + . ID=gene-HMPREF0889_0037;Name=rnfE;gbkey=Gene;gene=rnfE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0037 GCA_000177555.1|ADGP01000008.1 Genbank CDS 37348 37971 . + 0 ID=cds-EFD94621.1;Parent=gene-HMPREF0889_0037;Dbxref=NCBI_GP:EFD94621.1;Name=EFD94621.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948;gbkey=CDS;gene=rnfE;locus_tag=HMPREF0889_0037;product=electron transport complex%2C RnfABCDGE type%2C E subunit;protein_id=EFD94621.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 37971 38546 . + . ID=gene-HMPREF0889_0038;Name=rnfA;gbkey=Gene;gene=rnfA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0038 GCA_000177555.1|ADGP01000008.1 Genbank CDS 37971 38546 . + 0 ID=cds-EFD94622.1;Parent=gene-HMPREF0889_0038;Dbxref=NCBI_GP:EFD94622.1;Name=EFD94622.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01943;gbkey=CDS;gene=rnfA;locus_tag=HMPREF0889_0038;product=electron transport complex%2C RnfABCDGE type%2C A subunit;protein_id=EFD94622.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 38571 39419 . + . ID=gene-HMPREF0889_0039;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0039 GCA_000177555.1|ADGP01000008.1 Genbank CDS 38571 39419 . + 0 ID=cds-EFD94623.1;Parent=gene-HMPREF0889_0039;Dbxref=NCBI_GP:EFD94623.1;Name=EFD94623.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060%3B match to protein family HMM TIGR01944;gbkey=CDS;gene=rnfB;locus_tag=HMPREF0889_0039;product=electron transport complex%2C RnfABCDGE type%2C B subunit;protein_id=EFD94623.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 39424 40485 . + . ID=gene-HMPREF0889_0040;Name=HMPREF0889_0040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0040 GCA_000177555.1|ADGP01000008.1 Genbank CDS 39424 40485 . + 0 ID=cds-EFD94624.1;Parent=gene-HMPREF0889_0040;Dbxref=NCBI_GP:EFD94624.1;Name=EFD94624.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;locus_tag=HMPREF0889_0040;product=ApbE family protein;protein_id=EFD94624.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 40620 41072 . + . ID=gene-HMPREF0889_0041;Name=HMPREF0889_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0041 GCA_000177555.1|ADGP01000008.1 Genbank CDS 40620 41072 . + 0 ID=cds-EFD94625.1;Parent=gene-HMPREF0889_0041;Dbxref=NCBI_GP:EFD94625.1;Name=EFD94625.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;locus_tag=HMPREF0889_0041;product=transcriptional regulator%2C AsnC family;protein_id=EFD94625.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 41210 43111 . + . ID=gene-HMPREF0889_0042;Name=HMPREF0889_0042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0042 GCA_000177555.1|ADGP01000008.1 Genbank CDS 41210 43111 . + 0 ID=cds-EFD94626.1;Parent=gene-HMPREF0889_0042;Dbxref=NCBI_GP:EFD94626.1;Name=EFD94626.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0042;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94626.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 43265 44674 . + . ID=gene-HMPREF0889_0043;Name=HMPREF0889_0043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0043 GCA_000177555.1|ADGP01000008.1 Genbank CDS 43265 44674 . + 0 ID=cds-EFD94627.1;Parent=gene-HMPREF0889_0043;Dbxref=NCBI_GP:EFD94627.1;Name=EFD94627.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF0889_0043;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EFD94627.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 44994 46514 . + . ID=gene-HMPREF0889_0044;Name=HMPREF0889_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0044 GCA_000177555.1|ADGP01000008.1 Genbank CDS 44994 46514 . + 0 ID=cds-EFD94628.1;Parent=gene-HMPREF0889_0044;Dbxref=NCBI_GP:EFD94628.1;Name=EFD94628.1;Note=identified by match to protein family HMM PF01144;gbkey=CDS;locus_tag=HMPREF0889_0044;product=CoA transferase;protein_id=EFD94628.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 46531 47910 . + . ID=gene-HMPREF0889_0045;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0045 GCA_000177555.1|ADGP01000008.1 Genbank CDS 46531 47910 . + 0 ID=cds-EFD94629.1;Parent=gene-HMPREF0889_0045;Dbxref=NCBI_GP:EFD94629.1;Name=EFD94629.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00979;gbkey=CDS;gene=fumC;locus_tag=HMPREF0889_0045;product=fumarate hydratase%2C class II;protein_id=EFD94629.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 48119 48883 . + . ID=gene-HMPREF0889_0046;Name=bioW;gbkey=Gene;gene=bioW;gene_biotype=protein_coding;locus_tag=HMPREF0889_0046 GCA_000177555.1|ADGP01000008.1 Genbank CDS 48119 48883 . + 0 ID=cds-EFD94630.1;Parent=gene-HMPREF0889_0046;Dbxref=NCBI_GP:EFD94630.1;Name=EFD94630.1;Note=identified by match to protein family HMM PF03744%3B match to protein family HMM TIGR01204;gbkey=CDS;gene=bioW;locus_tag=HMPREF0889_0046;product=6-carboxyhexanoate--CoA ligase;protein_id=EFD94630.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 48888 50039 . + . ID=gene-HMPREF0889_0047;Name=HMPREF0889_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0047 GCA_000177555.1|ADGP01000008.1 Genbank CDS 48888 50039 . + 0 ID=cds-EFD94631.1;Parent=gene-HMPREF0889_0047;Dbxref=NCBI_GP:EFD94631.1;Name=EFD94631.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF0889_0047;product=putative 8-amino-7-oxononanoate synthase;protein_id=EFD94631.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 50027 50566 . + . ID=gene-HMPREF0889_0048;Name=HMPREF0889_0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0048 GCA_000177555.1|ADGP01000008.1 Genbank CDS 50027 50566 . + 0 ID=cds-EFD94632.1;Parent=gene-HMPREF0889_0048;Dbxref=NCBI_GP:EFD94632.1;Name=EFD94632.1;gbkey=CDS;locus_tag=HMPREF0889_0048;product=BioX family protein;protein_id=EFD94632.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 50781 51266 . + . ID=gene-HMPREF0889_0049;Name=HMPREF0889_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0049 GCA_000177555.1|ADGP01000008.1 Genbank CDS 50781 51266 . + 0 ID=cds-EFD94633.1;Parent=gene-HMPREF0889_0049;Dbxref=NCBI_GP:EFD94633.1;Name=EFD94633.1;Note=identified by match to protein family HMM PF00588;gbkey=CDS;locus_tag=HMPREF0889_0049;product=putative RNA methyltransferase%2C TrmH family%2C group 2;protein_id=EFD94633.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 51282 51629 . + . ID=gene-HMPREF0889_0050;Name=HMPREF0889_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0050 GCA_000177555.1|ADGP01000008.1 Genbank CDS 51282 51629 . + 0 ID=cds-EFD94634.1;Parent=gene-HMPREF0889_0050;Dbxref=NCBI_GP:EFD94634.1;Name=EFD94634.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0050;product=hypothetical protein;protein_id=EFD94634.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 51619 52542 . + . ID=gene-HMPREF0889_0051;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0051 GCA_000177555.1|ADGP01000008.1 Genbank CDS 51619 52542 . + 0 ID=cds-EFD94635.1;Parent=gene-HMPREF0889_0051;Dbxref=NCBI_GP:EFD94635.1;Name=EFD94635.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;locus_tag=HMPREF0889_0051;product=UDP-N-acetylmuramate dehydrogenase;protein_id=EFD94635.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 52693 54498 . + . ID=gene-HMPREF0889_0052;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0052 GCA_000177555.1|ADGP01000008.1 Genbank CDS 52693 54498 . + 0 ID=cds-EFD94636.1;Parent=gene-HMPREF0889_0052;Dbxref=NCBI_GP:EFD94636.1;Name=EFD94636.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394;gbkey=CDS;gene=typA;locus_tag=HMPREF0889_0052;product=GTP-binding protein TypA;protein_id=EFD94636.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 54885 55328 . - . ID=gene-HMPREF0889_0053;Name=HMPREF0889_0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0053 GCA_000177555.1|ADGP01000008.1 Genbank CDS 54885 55328 . - 0 ID=cds-EFD94637.1;Parent=gene-HMPREF0889_0053;Dbxref=NCBI_GP:EFD94637.1;Name=EFD94637.1;gbkey=CDS;locus_tag=HMPREF0889_0053;product=hypothetical protein;protein_id=EFD94637.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 55329 56750 . + . ID=gene-HMPREF0889_0054;Name=HMPREF0889_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0054 GCA_000177555.1|ADGP01000008.1 Genbank CDS 55329 56750 . + 0 ID=cds-EFD94638.1;Parent=gene-HMPREF0889_0054;Dbxref=NCBI_GP:EFD94638.1;Name=EFD94638.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF0889_0054;product=hypothetical protein;protein_id=EFD94638.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 57077 57958 . + . ID=gene-HMPREF0889_0055;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0055 GCA_000177555.1|ADGP01000008.1 Genbank CDS 57077 57958 . + 0 ID=cds-EFD94639.1;Parent=gene-HMPREF0889_0055;Dbxref=NCBI_GP:EFD94639.1;Name=EFD94639.1;Note=identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388;gbkey=CDS;gene=glyQ;locus_tag=HMPREF0889_0055;product=glycine--tRNA ligase%2C alpha subunit;protein_id=EFD94639.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 57955 60009 . + . ID=gene-HMPREF0889_0056;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0056 GCA_000177555.1|ADGP01000008.1 Genbank CDS 57955 60009 . + 0 ID=cds-EFD94640.1;Parent=gene-HMPREF0889_0056;Dbxref=NCBI_GP:EFD94640.1;Name=EFD94640.1;Note=identified by match to protein family HMM PF02092%3B match to protein family HMM TIGR00211;gbkey=CDS;gene=glyS;locus_tag=HMPREF0889_0056;product=glycine--tRNA ligase%2C beta subunit;protein_id=EFD94640.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 60058 60180 . + . ID=gene-HMPREF0889_0057;Name=HMPREF0889_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0057 GCA_000177555.1|ADGP01000008.1 Genbank CDS 60058 60180 . + 0 ID=cds-EFD94641.1;Parent=gene-HMPREF0889_0057;Dbxref=NCBI_GP:EFD94641.1;Name=EFD94641.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0057;product=hypothetical protein;protein_id=EFD94641.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 60304 61503 . + . ID=gene-HMPREF0889_0058;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF0889_0058 GCA_000177555.1|ADGP01000008.1 Genbank CDS 60304 61503 . + 0 ID=cds-EFD94642.1;Parent=gene-HMPREF0889_0058;Dbxref=NCBI_GP:EFD94642.1;Name=EFD94642.1;Note=identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr;locus_tag=HMPREF0889_0058;product=alanine racemase;protein_id=EFD94642.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 61768 62946 . + . ID=gene-HMPREF0889_0059;Name=HMPREF0889_0059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0059 GCA_000177555.1|ADGP01000008.1 Genbank CDS 61768 62946 . + 0 ID=cds-EFD94643.1;Parent=gene-HMPREF0889_0059;Dbxref=NCBI_GP:EFD94643.1;Name=EFD94643.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00266%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF0889_0059;product=aminotransferase%2C class I/II;protein_id=EFD94643.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 63134 63319 . - . ID=gene-HMPREF0889_0060;Name=HMPREF0889_0060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0060 GCA_000177555.1|ADGP01000008.1 Genbank CDS 63134 63319 . - 0 ID=cds-EFD94644.1;Parent=gene-HMPREF0889_0060;Dbxref=NCBI_GP:EFD94644.1;Name=EFD94644.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0060;product=hypothetical protein;protein_id=EFD94644.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 63495 63896 . + . ID=gene-HMPREF0889_0061;Name=HMPREF0889_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0061 GCA_000177555.1|ADGP01000008.1 Genbank CDS 63495 63896 . + 0 ID=cds-EFD94645.1;Parent=gene-HMPREF0889_0061;Dbxref=NCBI_GP:EFD94645.1;Name=EFD94645.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF0889_0061;product=hypothetical protein;protein_id=EFD94645.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 63912 64334 . + . ID=gene-HMPREF0889_0062;Name=HMPREF0889_0062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0062 GCA_000177555.1|ADGP01000008.1 Genbank CDS 63912 64334 . + 0 ID=cds-EFD94646.1;Parent=gene-HMPREF0889_0062;Dbxref=NCBI_GP:EFD94646.1;Name=EFD94646.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF0889_0062;product=hypothetical protein;protein_id=EFD94646.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 64653 64805 . + . ID=gene-HMPREF0889_0063;Name=HMPREF0889_0063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0063 GCA_000177555.1|ADGP01000008.1 Genbank CDS 64653 64805 . + 0 ID=cds-EFD94647.1;Parent=gene-HMPREF0889_0063;Dbxref=NCBI_GP:EFD94647.1;Name=EFD94647.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0063;product=hypothetical protein;protein_id=EFD94647.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 64845 65405 . - . ID=gene-HMPREF0889_0064;Name=HMPREF0889_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0064 GCA_000177555.1|ADGP01000008.1 Genbank CDS 64845 65405 . - 0 ID=cds-EFD94648.1;Parent=gene-HMPREF0889_0064;Dbxref=NCBI_GP:EFD94648.1;Name=EFD94648.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805;gbkey=CDS;locus_tag=HMPREF0889_0064;product=transcriptional regulator%2C AraC family;protein_id=EFD94648.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 65689 65892 . + . ID=gene-HMPREF0889_0065;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0065 GCA_000177555.1|ADGP01000008.1 Genbank CDS 65689 65892 . + 0 ID=cds-EFD94649.1;Parent=gene-HMPREF0889_0065;Dbxref=NCBI_GP:EFD94649.1;Name=EFD94649.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04023;gbkey=CDS;gene=feoA;locus_tag=HMPREF0889_0065;product=FeoA domain protein;protein_id=EFD94649.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 65910 66131 . + . ID=gene-HMPREF0889_0066;Name=HMPREF0889_0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0066 GCA_000177555.1|ADGP01000008.1 Genbank CDS 65910 66131 . + 0 ID=cds-EFD94650.1;Parent=gene-HMPREF0889_0066;Dbxref=NCBI_GP:EFD94650.1;Name=EFD94650.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04023;gbkey=CDS;locus_tag=HMPREF0889_0066;product=FeoA domain protein;protein_id=EFD94650.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 66148 68331 . + . ID=gene-HMPREF0889_0067;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0067 GCA_000177555.1|ADGP01000008.1 Genbank CDS 66148 68331 . + 0 ID=cds-EFD94651.1;Parent=gene-HMPREF0889_0067;Dbxref=NCBI_GP:EFD94651.1;Name=EFD94651.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437;gbkey=CDS;gene=feoB;locus_tag=HMPREF0889_0067;product=ferrous iron transport protein B;protein_id=EFD94651.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 68359 68487 . + . ID=gene-HMPREF0889_0068;Name=HMPREF0889_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0068 GCA_000177555.1|ADGP01000008.1 Genbank CDS 68359 68487 . + 0 ID=cds-EFD94652.1;Parent=gene-HMPREF0889_0068;Dbxref=NCBI_GP:EFD94652.1;Name=EFD94652.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0068;product=hypothetical protein;protein_id=EFD94652.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 68641 69921 . + . ID=gene-HMPREF0889_0069;Name=HMPREF0889_0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0069 GCA_000177555.1|ADGP01000008.1 Genbank CDS 68641 69921 . + 0 ID=cds-EFD94653.1;Parent=gene-HMPREF0889_0069;Dbxref=NCBI_GP:EFD94653.1;Name=EFD94653.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833;gbkey=CDS;locus_tag=HMPREF0889_0069;product=DHHA2 domain protein;protein_id=EFD94653.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 69982 72198 . + . ID=gene-HMPREF0889_0070;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0070 GCA_000177555.1|ADGP01000008.1 Genbank CDS 69982 72198 . + 0 ID=cds-EFD94654.1;Parent=gene-HMPREF0889_0070;Dbxref=NCBI_GP:EFD94654.1;Name=EFD94654.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073;gbkey=CDS;gene=pcrA;locus_tag=HMPREF0889_0070;product=ATP-dependent DNA helicase PcrA;protein_id=EFD94654.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 72218 74224 . + . ID=gene-HMPREF0889_0071;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0071 GCA_000177555.1|ADGP01000008.1 Genbank CDS 72218 74224 . + 0 ID=cds-EFD94655.1;Parent=gene-HMPREF0889_0071;Dbxref=NCBI_GP:EFD94655.1;Name=EFD94655.1;Note=identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;locus_tag=HMPREF0889_0071;product=DNA ligase (NAD+);protein_id=EFD94655.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 74295 74585 . + . ID=gene-HMPREF0889_0072;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0072 GCA_000177555.1|ADGP01000008.1 Genbank CDS 74295 74585 . + 0 ID=cds-EFD94656.1;Parent=gene-HMPREF0889_0072;Dbxref=NCBI_GP:EFD94656.1;Name=EFD94656.1;Note=identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135;gbkey=CDS;gene=gatC;locus_tag=HMPREF0889_0072;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C C subunit;protein_id=EFD94656.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 74597 76063 . + . ID=gene-HMPREF0889_0073;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0073 GCA_000177555.1|ADGP01000008.1 Genbank CDS 74597 76063 . + 0 ID=cds-EFD94657.1;Parent=gene-HMPREF0889_0073;Dbxref=NCBI_GP:EFD94657.1;Name=EFD94657.1;Note=identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132;gbkey=CDS;gene=gatA;locus_tag=HMPREF0889_0073;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C A subunit;protein_id=EFD94657.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 76060 77502 . + . ID=gene-HMPREF0889_0074;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0074 GCA_000177555.1|ADGP01000008.1 Genbank CDS 76060 77502 . + 0 ID=cds-EFD94658.1;Parent=gene-HMPREF0889_0074;Dbxref=NCBI_GP:EFD94658.1;Name=EFD94658.1;Note=identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133;gbkey=CDS;gene=gatB;locus_tag=HMPREF0889_0074;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C B subunit;protein_id=EFD94658.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 77705 79162 . + . ID=gene-HMPREF0889_0075;Name=HMPREF0889_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0075 GCA_000177555.1|ADGP01000008.1 Genbank CDS 77705 79162 . + 0 ID=cds-EFD94659.1;Parent=gene-HMPREF0889_0075;Dbxref=NCBI_GP:EFD94659.1;Name=EFD94659.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM TIGR00785;gbkey=CDS;locus_tag=HMPREF0889_0075;product=transporter%2C DASS family;protein_id=EFD94659.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 79181 79753 . + . ID=gene-HMPREF0889_0076;Name=HMPREF0889_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0076 GCA_000177555.1|ADGP01000008.1 Genbank CDS 79181 79753 . + 0 ID=cds-EFD94660.1;Parent=gene-HMPREF0889_0076;Dbxref=NCBI_GP:EFD94660.1;Name=EFD94660.1;gbkey=CDS;locus_tag=HMPREF0889_0076;product=bacterial transferase hexapeptide repeat protein;protein_id=EFD94660.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 79769 81268 . + . ID=gene-HMPREF0889_0077;Name=HMPREF0889_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0077 GCA_000177555.1|ADGP01000008.1 Genbank CDS 79769 81268 . + 0 ID=cds-EFD94661.1;Parent=gene-HMPREF0889_0077;Dbxref=NCBI_GP:EFD94661.1;Name=EFD94661.1;Note=identified by match to protein family HMM PF02550%3B match to protein family HMM TIGR03458;gbkey=CDS;locus_tag=HMPREF0889_0077;product=succinate CoA transferase;protein_id=EFD94661.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 81689 82366 . + . ID=gene-HMPREF0889_0078;Name=HMPREF0889_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0078 GCA_000177555.1|ADGP01000008.1 Genbank CDS 81689 82366 . + 0 ID=cds-EFD94662.1;Parent=gene-HMPREF0889_0078;Dbxref=NCBI_GP:EFD94662.1;Name=EFD94662.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;locus_tag=HMPREF0889_0078;product=cyclic nucleotide-binding domain protein;protein_id=EFD94662.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 82651 82791 . + . ID=gene-HMPREF0889_0079;Name=HMPREF0889_0079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0079 GCA_000177555.1|ADGP01000008.1 Genbank CDS 82651 82791 . + 0 ID=cds-EFD94663.1;Parent=gene-HMPREF0889_0079;Dbxref=NCBI_GP:EFD94663.1;Name=EFD94663.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0079;product=hypothetical protein;protein_id=EFD94663.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 82805 87688 . + . ID=gene-HMPREF0889_0080;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0080 GCA_000177555.1|ADGP01000008.1 Genbank CDS 82805 87688 . + 0 ID=cds-EFD94664.1;Parent=gene-HMPREF0889_0080;Dbxref=NCBI_GP:EFD94664.1;Name=EFD94664.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;gene=tonB;locus_tag=HMPREF0889_0080;product=TonB-dependent receptor plug domain protein;protein_id=EFD94664.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 87860 90001 . + . ID=gene-HMPREF0889_0081;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0081 GCA_000177555.1|ADGP01000008.1 Genbank CDS 87860 90001 . + 0 ID=cds-EFD94665.1;Parent=gene-HMPREF0889_0081;Dbxref=NCBI_GP:EFD94665.1;Name=EFD94665.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631;gbkey=CDS;gene=uvrB;locus_tag=HMPREF0889_0081;product=excinuclease ABC%2C B subunit;protein_id=EFD94665.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 90007 92871 . + . ID=gene-HMPREF0889_0082;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=HMPREF0889_0082 GCA_000177555.1|ADGP01000008.1 Genbank CDS 90007 92871 . + 0 ID=cds-EFD94666.1;Parent=gene-HMPREF0889_0082;Dbxref=NCBI_GP:EFD94666.1;Name=EFD94666.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;gbkey=CDS;gene=uvrA;locus_tag=HMPREF0889_0082;product=excinuclease ABC%2C A subunit;protein_id=EFD94666.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 92861 94699 . + . ID=gene-HMPREF0889_0083;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0083 GCA_000177555.1|ADGP01000008.1 Genbank CDS 92861 94699 . + 0 ID=cds-EFD94667.1;Parent=gene-HMPREF0889_0083;Dbxref=NCBI_GP:EFD94667.1;Name=EFD94667.1;Note=identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;locus_tag=HMPREF0889_0083;product=excinuclease ABC%2C C subunit;protein_id=EFD94667.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 94768 95403 . + . ID=gene-HMPREF0889_0084;Name=HMPREF0889_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0084 GCA_000177555.1|ADGP01000008.1 Genbank CDS 94768 95403 . + 0 ID=cds-EFD94668.1;Parent=gene-HMPREF0889_0084;Dbxref=NCBI_GP:EFD94668.1;Name=EFD94668.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0084;product=hypothetical protein;protein_id=EFD94668.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 95756 95917 . + . ID=gene-HMPREF0889_0085;Name=HMPREF0889_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0085 GCA_000177555.1|ADGP01000008.1 Genbank CDS 95756 95917 . + 0 ID=cds-EFD94669.1;Parent=gene-HMPREF0889_0085;Dbxref=NCBI_GP:EFD94669.1;Name=EFD94669.1;Note=identified by match to protein family HMM PF00301;gbkey=CDS;locus_tag=HMPREF0889_0085;product=rubredoxin;protein_id=EFD94669.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 96185 97378 . + . ID=gene-HMPREF0889_0086;Name=HMPREF0889_0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0086 GCA_000177555.1|ADGP01000008.1 Genbank CDS 96185 97378 . + 0 ID=cds-EFD94670.1;Parent=gene-HMPREF0889_0086;Dbxref=NCBI_GP:EFD94670.1;Name=EFD94670.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF0889_0086;product=aminotransferase%2C class I/II;protein_id=EFD94670.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 97670 102061 . + . ID=gene-HMPREF0889_0087;Name=HMPREF0889_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0087 GCA_000177555.1|ADGP01000008.1 Genbank CDS 97670 102061 . + 0 ID=cds-EFD94671.1;Parent=gene-HMPREF0889_0087;Dbxref=NCBI_GP:EFD94671.1;Name=EFD94671.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_0087;product=Hep/Hag repeat protein;protein_id=EFD94671.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 102183 102344 . + . ID=gene-HMPREF0889_0088;Name=HMPREF0889_0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0088 GCA_000177555.1|ADGP01000008.1 Genbank CDS 102183 102344 . + 0 ID=cds-EFD94672.1;Parent=gene-HMPREF0889_0088;Dbxref=NCBI_GP:EFD94672.1;Name=EFD94672.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0088;product=hypothetical protein;protein_id=EFD94672.1;transl_table=11 GCA_000177555.1|ADGP01000008.1 Genbank gene 102423 102716 . + . ID=gene-HMPREF0889_0089;Name=HMPREF0889_0089;end_range=102716,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0089;partial=true GCA_000177555.1|ADGP01000008.1 Genbank CDS 102423 102716 . + 0 ID=cds-EFD94673.1;Parent=gene-HMPREF0889_0089;Dbxref=NCBI_GP:EFD94673.1;Name=EFD94673.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=102716,.;gbkey=CDS;locus_tag=HMPREF0889_0089;partial=true;product=hypothetical protein;protein_id=EFD94673.1;transl_table=11 ##sequence-region ADGP01000007.1 1 11608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000007.1 Genbank region 1 11608 . + . ID=ADGP01000007.1:1..11608;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000007.1 Genbank gene 147 1571 . - . ID=gene-HMPREF0889_0090;Name=HMPREF0889_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0090 GCA_000177555.1|ADGP01000007.1 Genbank CDS 147 1571 . - 0 ID=cds-EFD94674.1;Parent=gene-HMPREF0889_0090;Dbxref=NCBI_GP:EFD94674.1;Name=EFD94674.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;locus_tag=HMPREF0889_0090;product=aldehyde dehydrogenase (NAD) family protein;protein_id=EFD94674.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 1801 3189 . - . ID=gene-HMPREF0889_0091;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF0889_0091 GCA_000177555.1|ADGP01000007.1 Genbank CDS 1801 3189 . - 0 ID=cds-EFD94675.1;Parent=gene-HMPREF0889_0091;Dbxref=NCBI_GP:EFD94675.1;Name=EFD94675.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF0889_0091;product=amino acid carrier protein;protein_id=EFD94675.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 3485 4261 . - . ID=gene-HMPREF0889_0092;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=HMPREF0889_0092 GCA_000177555.1|ADGP01000007.1 Genbank CDS 3485 4261 . - 0 ID=cds-EFD94676.1;Parent=gene-HMPREF0889_0092;Dbxref=NCBI_GP:EFD94676.1;Name=EFD94676.1;Note=identified by match to protein family HMM PF01975%3B match to protein family HMM TIGR00087;gbkey=CDS;gene=surE;locus_tag=HMPREF0889_0092;product=5'/3'-nucleotidase SurE;protein_id=EFD94676.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 4276 5523 . - . ID=gene-HMPREF0889_0093;Name=HMPREF0889_0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0093 GCA_000177555.1|ADGP01000007.1 Genbank CDS 4276 5523 . - 0 ID=cds-EFD94677.1;Parent=gene-HMPREF0889_0093;Dbxref=NCBI_GP:EFD94677.1;Name=EFD94677.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF0889_0093;product=glycosyltransferase%2C group 2 family protein;protein_id=EFD94677.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 5543 6226 . - . ID=gene-HMPREF0889_0094;Name=HMPREF0889_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0094 GCA_000177555.1|ADGP01000007.1 Genbank CDS 5543 6226 . - 0 ID=cds-EFD94678.1;Parent=gene-HMPREF0889_0094;Dbxref=NCBI_GP:EFD94678.1;Name=EFD94678.1;Note=identified by match to protein family HMM PF01066;gbkey=CDS;locus_tag=HMPREF0889_0094;product=putative CDP-diacylglycerol-serine O-phosphatidyltransferase;protein_id=EFD94678.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 6223 6861 . - . ID=gene-HMPREF0889_0095;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=HMPREF0889_0095 GCA_000177555.1|ADGP01000007.1 Genbank CDS 6223 6861 . - 0 ID=cds-EFD94679.1;Parent=gene-HMPREF0889_0095;Dbxref=NCBI_GP:EFD94679.1;Name=EFD94679.1;Note=identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00164;gbkey=CDS;gene=psd;locus_tag=HMPREF0889_0095;product=phosphatidylserine decarboxylase;protein_id=EFD94679.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 6871 7602 . - . ID=gene-HMPREF0889_0096;Name=HMPREF0889_0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0096 GCA_000177555.1|ADGP01000007.1 Genbank CDS 6871 7602 . - 0 ID=cds-EFD94680.1;Parent=gene-HMPREF0889_0096;Dbxref=NCBI_GP:EFD94680.1;Name=EFD94680.1;Note=identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696;gbkey=CDS;locus_tag=HMPREF0889_0096;product=glycosyltransferase%2C WecB/TagA/CpsF family;protein_id=EFD94680.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 7622 9088 . - . ID=gene-HMPREF0889_0097;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0097 GCA_000177555.1|ADGP01000007.1 Genbank CDS 7622 9088 . - 0 ID=cds-EFD94681.1;Parent=gene-HMPREF0889_0097;Dbxref=NCBI_GP:EFD94681.1;Name=EFD94681.1;Note=identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302;gbkey=CDS;gene=guaB;locus_tag=HMPREF0889_0097;product=inosine-5'-monophosphate dehydrogenase;protein_id=EFD94681.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 9208 11244 . - . ID=gene-HMPREF0889_0098;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0098 GCA_000177555.1|ADGP01000007.1 Genbank CDS 9208 11244 . - 0 ID=cds-EFD94682.1;Parent=gene-HMPREF0889_0098;Dbxref=NCBI_GP:EFD94682.1;Name=EFD94682.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00643;gbkey=CDS;gene=recG;locus_tag=HMPREF0889_0098;product=ATP-dependent DNA helicase RecG;protein_id=EFD94682.1;transl_table=11 GCA_000177555.1|ADGP01000007.1 Genbank gene 11380 11571 . + . ID=gene-HMPREF0889_0099;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0099 GCA_000177555.1|ADGP01000007.1 Genbank CDS 11380 11571 . + 0 ID=cds-EFD94683.1;Parent=gene-HMPREF0889_0099;Dbxref=NCBI_GP:EFD94683.1;Name=EFD94683.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009;gbkey=CDS;gene=rpmB;locus_tag=HMPREF0889_0099;product=ribosomal protein L28;protein_id=EFD94683.1;transl_table=11 ##sequence-region ADGP01000006.1 1 3575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000006.1 Genbank region 1 3575 . + . ID=ADGP01000006.1:1..3575;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000006.1 Genbank gene 23 970 . - . ID=gene-HMPREF0889_0499;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=HMPREF0889_0499 GCA_000177555.1|ADGP01000006.1 Genbank CDS 23 970 . - 0 ID=cds-EFD94684.1;Parent=gene-HMPREF0889_0499;Dbxref=NCBI_GP:EFD94684.1;Name=EFD94684.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04198;gbkey=CDS;gene=deoR;locus_tag=HMPREF0889_0499;product=deoxyribonucleoside regulator;protein_id=EFD94684.1;transl_table=11 GCA_000177555.1|ADGP01000006.1 Genbank gene 1286 2788 . + . ID=gene-HMPREF0889_0500;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0500 GCA_000177555.1|ADGP01000006.1 Genbank CDS 1286 2788 . + 0 ID=cds-EFD94685.1;Parent=gene-HMPREF0889_0500;Dbxref=NCBI_GP:EFD94685.1;Name=EFD94685.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311;gbkey=CDS;gene=glpK;locus_tag=HMPREF0889_0500;product=glycerol kinase;protein_id=EFD94685.1;transl_table=11 GCA_000177555.1|ADGP01000006.1 Genbank gene 2819 3544 . + . ID=gene-HMPREF0889_0501;Name=HMPREF0889_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0501 GCA_000177555.1|ADGP01000006.1 Genbank CDS 2819 3544 . + 0 ID=cds-EFD94686.1;Parent=gene-HMPREF0889_0501;Dbxref=NCBI_GP:EFD94686.1;Name=EFD94686.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00230;gbkey=CDS;locus_tag=HMPREF0889_0501;product=MIP family channel protein;protein_id=EFD94686.1;transl_table=11 ##sequence-region ADGP01000005.1 1 98870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000005.1 Genbank region 1 98870 . + . ID=ADGP01000005.1:1..98870;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000005.1 Genbank gene 118 393 . - . ID=gene-HMPREF0889_1426;Name=HMPREF0889_1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1426 GCA_000177555.1|ADGP01000005.1 Genbank CDS 118 393 . - 0 ID=cds-EFD94687.1;Parent=gene-HMPREF0889_1426;Dbxref=NCBI_GP:EFD94687.1;Name=EFD94687.1;Note=identified by match to protein family HMM PF01541;gbkey=CDS;locus_tag=HMPREF0889_1426;product=GIY-YIG catalytic domain protein;protein_id=EFD94687.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 393 878 . - . ID=gene-HMPREF0889_1427;Name=HMPREF0889_1427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1427 GCA_000177555.1|ADGP01000005.1 Genbank CDS 393 878 . - 0 ID=cds-EFD94688.1;Parent=gene-HMPREF0889_1427;Dbxref=NCBI_GP:EFD94688.1;Name=EFD94688.1;Note=identified by match to protein family HMM PF00160;gbkey=CDS;locus_tag=HMPREF0889_1427;product=peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;protein_id=EFD94688.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 1274 1714 . + . ID=gene-HMPREF0889_1428;Name=HMPREF0889_1428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1428 GCA_000177555.1|ADGP01000005.1 Genbank CDS 1274 1714 . + 0 ID=cds-EFD94689.1;Parent=gene-HMPREF0889_1428;Dbxref=NCBI_GP:EFD94689.1;Name=EFD94689.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=HMPREF0889_1428;product=transcriptional regulator%2C MarR family;protein_id=EFD94689.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 1866 3434 . + . ID=gene-HMPREF0889_1429;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=HMPREF0889_1429 GCA_000177555.1|ADGP01000005.1 Genbank CDS 1866 3434 . + 0 ID=cds-EFD94690.1;Parent=gene-HMPREF0889_1429;Dbxref=NCBI_GP:EFD94690.1;Name=EFD94690.1;Note=identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703;gbkey=CDS;gene=hcp;locus_tag=HMPREF0889_1429;product=hydroxylamine reductase;protein_id=EFD94690.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 3516 4925 . - . ID=gene-HMPREF0889_1430;Name=HMPREF0889_1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1430 GCA_000177555.1|ADGP01000005.1 Genbank CDS 3516 4925 . - 0 ID=cds-EFD94691.1;Parent=gene-HMPREF0889_1430;Dbxref=NCBI_GP:EFD94691.1;Name=EFD94691.1;Note=identified by match to protein family HMM PF05658;gbkey=CDS;locus_tag=HMPREF0889_1430;product=Hep/Hag repeat protein;protein_id=EFD94691.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 5188 6195 . - . ID=gene-HMPREF0889_1431;Name=HMPREF0889_1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1431 GCA_000177555.1|ADGP01000005.1 Genbank CDS 5188 6195 . - 0 ID=cds-EFD94692.1;Parent=gene-HMPREF0889_1431;Dbxref=NCBI_GP:EFD94692.1;Name=EFD94692.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF05658;gbkey=CDS;locus_tag=HMPREF0889_1431;product=Hep/Hag repeat protein;protein_id=EFD94692.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 6369 7340 . - . ID=gene-HMPREF0889_1432;Name=HMPREF0889_1432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1432 GCA_000177555.1|ADGP01000005.1 Genbank CDS 6369 7340 . - 0 ID=cds-EFD94693.1;Parent=gene-HMPREF0889_1432;Dbxref=NCBI_GP:EFD94693.1;Name=EFD94693.1;Note=identified by match to protein family HMM PF00877%3B match to protein family HMM PF01471;gbkey=CDS;locus_tag=HMPREF0889_1432;product=NlpC/P60 family protein;protein_id=EFD94693.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 7392 7562 . - . ID=gene-HMPREF0889_1433;Name=HMPREF0889_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1433 GCA_000177555.1|ADGP01000005.1 Genbank CDS 7392 7562 . - 0 ID=cds-EFD94694.1;Parent=gene-HMPREF0889_1433;Dbxref=NCBI_GP:EFD94694.1;Name=EFD94694.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1433;product=hypothetical protein;protein_id=EFD94694.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 7707 8525 . + . ID=gene-HMPREF0889_1434;Name=HMPREF0889_1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1434 GCA_000177555.1|ADGP01000005.1 Genbank CDS 7707 8525 . + 0 ID=cds-EFD94695.1;Parent=gene-HMPREF0889_1434;Dbxref=NCBI_GP:EFD94695.1;Name=EFD94695.1;gbkey=CDS;locus_tag=HMPREF0889_1434;product=hypothetical protein;protein_id=EFD94695.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 8537 9652 . + . ID=gene-HMPREF0889_1435;Name=HMPREF0889_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1435 GCA_000177555.1|ADGP01000005.1 Genbank CDS 8537 9652 . + 0 ID=cds-EFD94696.1;Parent=gene-HMPREF0889_1435;Dbxref=NCBI_GP:EFD94696.1;Name=EFD94696.1;Note=identified by match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF0889_1435;product=ATPase family associated with various cellular activities (AAA);protein_id=EFD94696.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 9654 11045 . + . ID=gene-HMPREF0889_1436;Name=HMPREF0889_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1436 GCA_000177555.1|ADGP01000005.1 Genbank CDS 9654 11045 . + 0 ID=cds-EFD94697.1;Parent=gene-HMPREF0889_1436;Dbxref=NCBI_GP:EFD94697.1;Name=EFD94697.1;gbkey=CDS;locus_tag=HMPREF0889_1436;product=hypothetical protein;protein_id=EFD94697.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 11088 12521 . - . ID=gene-HMPREF0889_1437;Name=HMPREF0889_1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1437 GCA_000177555.1|ADGP01000005.1 Genbank CDS 11088 12521 . - 0 ID=cds-EFD94698.1;Parent=gene-HMPREF0889_1437;Dbxref=NCBI_GP:EFD94698.1;Name=EFD94698.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF0889_1437;product=Na+/H+ antiporter family protein;protein_id=EFD94698.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 12629 13396 . - . ID=gene-HMPREF0889_1438;Name=HMPREF0889_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1438 GCA_000177555.1|ADGP01000005.1 Genbank CDS 12629 13396 . - 0 ID=cds-EFD94699.1;Parent=gene-HMPREF0889_1438;Dbxref=NCBI_GP:EFD94699.1;Name=EFD94699.1;Note=identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;locus_tag=HMPREF0889_1438;product=hydrolase%2C TatD family;protein_id=EFD94699.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 13398 15335 . - . ID=gene-HMPREF0889_1439;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1439 GCA_000177555.1|ADGP01000005.1 Genbank CDS 13398 15335 . - 0 ID=cds-EFD94700.1;Parent=gene-HMPREF0889_1439;Dbxref=NCBI_GP:EFD94700.1;Name=EFD94700.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399;gbkey=CDS;gene=metG;locus_tag=HMPREF0889_1439;product=methionine--tRNA ligase;protein_id=EFD94700.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 15376 16218 . - . ID=gene-HMPREF0889_1440;Name=yraL;gbkey=Gene;gene=yraL;gene_biotype=protein_coding;locus_tag=HMPREF0889_1440 GCA_000177555.1|ADGP01000005.1 Genbank CDS 15376 16218 . - 0 ID=cds-EFD94701.1;Parent=gene-HMPREF0889_1440;Dbxref=NCBI_GP:EFD94701.1;Name=EFD94701.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;gene=yraL;locus_tag=HMPREF0889_1440;product=S-adenosylmethionine-dependent methyltransferase%2C YraL family;protein_id=EFD94701.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 16202 16960 . - . ID=gene-HMPREF0889_1441;Name=HMPREF0889_1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1441 GCA_000177555.1|ADGP01000005.1 Genbank CDS 16202 16960 . - 0 ID=cds-EFD94702.1;Parent=gene-HMPREF0889_1441;Dbxref=NCBI_GP:EFD94702.1;Name=EFD94702.1;Note=identified by match to protein family HMM PF05175;gbkey=CDS;locus_tag=HMPREF0889_1441;product=methyltransferase small domain protein;protein_id=EFD94702.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 16950 17792 . - . ID=gene-HMPREF0889_1442;Name=HMPREF0889_1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1442 GCA_000177555.1|ADGP01000005.1 Genbank CDS 16950 17792 . - 0 ID=cds-EFD94703.1;Parent=gene-HMPREF0889_1442;Dbxref=NCBI_GP:EFD94703.1;Name=EFD94703.1;Note=identified by match to protein family HMM PF04468;gbkey=CDS;locus_tag=HMPREF0889_1442;product=PSP1 C-terminal domain protein;protein_id=EFD94703.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 17793 18884 . - . ID=gene-HMPREF0889_1443;Name=HMPREF0889_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1443 GCA_000177555.1|ADGP01000005.1 Genbank CDS 17793 18884 . - 0 ID=cds-EFD94704.1;Parent=gene-HMPREF0889_1443;Dbxref=NCBI_GP:EFD94704.1;Name=EFD94704.1;gbkey=CDS;locus_tag=HMPREF0889_1443;product=putative DNA polymerase III%2C delta' subunit;protein_id=EFD94704.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 18927 19625 . - . ID=gene-HMPREF0889_1444;Name=HMPREF0889_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1444 GCA_000177555.1|ADGP01000005.1 Genbank CDS 18927 19625 . - 0 ID=cds-EFD94705.1;Parent=gene-HMPREF0889_1444;Dbxref=NCBI_GP:EFD94705.1;Name=EFD94705.1;Note=identified by match to protein family HMM PF02223;gbkey=CDS;locus_tag=HMPREF0889_1444;product=dTMP kinase;protein_id=EFD94705.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 19630 21084 . - . ID=gene-HMPREF0889_1445;Name=HMPREF0889_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1445 GCA_000177555.1|ADGP01000005.1 Genbank CDS 19630 21084 . - 0 ID=cds-EFD94706.1;Parent=gene-HMPREF0889_1445;Dbxref=NCBI_GP:EFD94706.1;Name=EFD94706.1;Note=identified by match to protein family HMM PF01276%3B match to protein family HMM PF03711;gbkey=CDS;locus_tag=HMPREF0889_1445;product=Orn/Lys/Arg decarboxylase%2C major domain protein;protein_id=EFD94706.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 21273 21395 . - . ID=gene-HMPREF0889_1446;Name=HMPREF0889_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1446 GCA_000177555.1|ADGP01000005.1 Genbank CDS 21273 21395 . - 0 ID=cds-EFD94707.1;Parent=gene-HMPREF0889_1446;Dbxref=NCBI_GP:EFD94707.1;Name=EFD94707.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1446;product=hypothetical protein;protein_id=EFD94707.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 21581 22426 . + . ID=gene-HMPREF0889_1447;Name=HMPREF0889_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1447 GCA_000177555.1|ADGP01000005.1 Genbank CDS 21581 22426 . + 0 ID=cds-EFD94708.1;Parent=gene-HMPREF0889_1447;Dbxref=NCBI_GP:EFD94708.1;Name=EFD94708.1;Note=identified by match to protein family HMM PF08543;gbkey=CDS;locus_tag=HMPREF0889_1447;product=pyridoxal kinase;protein_id=EFD94708.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 22486 22932 . - . ID=gene-HMPREF0889_1448;Name=HMPREF0889_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1448 GCA_000177555.1|ADGP01000005.1 Genbank CDS 22486 22932 . - 0 ID=cds-EFD94709.1;Parent=gene-HMPREF0889_1448;Dbxref=NCBI_GP:EFD94709.1;Name=EFD94709.1;Note=identified by match to protein family HMM PF04138;gbkey=CDS;locus_tag=HMPREF0889_1448;product=GtrA-like protein;protein_id=EFD94709.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 23108 23542 . + . ID=gene-HMPREF0889_1449;Name=HMPREF0889_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1449 GCA_000177555.1|ADGP01000005.1 Genbank CDS 23108 23542 . + 0 ID=cds-EFD94710.1;Parent=gene-HMPREF0889_1449;Dbxref=NCBI_GP:EFD94710.1;Name=EFD94710.1;Note=identified by match to protein family HMM PF01047%3B match to protein family HMM PF01978;gbkey=CDS;locus_tag=HMPREF0889_1449;product=transcriptional regulator%2C MarR family;protein_id=EFD94710.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 23596 24735 . - . ID=gene-HMPREF0889_1450;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1450 GCA_000177555.1|ADGP01000005.1 Genbank CDS 23596 24735 . - 0 ID=cds-EFD94711.1;Parent=gene-HMPREF0889_1450;Dbxref=NCBI_GP:EFD94711.1;Name=EFD94711.1;Note=identified by match to protein family HMM PF01986%3B match to protein family HMM PF03749%3B match to protein family HMM TIGR00230;gbkey=CDS;gene=sfsA;locus_tag=HMPREF0889_1450;product=sugar fermentation stimulation protein;protein_id=EFD94711.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 25569 26204 . - . ID=gene-HMPREF0889_1451;Name=HMPREF0889_1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1451 GCA_000177555.1|ADGP01000005.1 Genbank CDS 25569 26204 . - 0 ID=cds-EFD94712.1;Parent=gene-HMPREF0889_1451;Dbxref=NCBI_GP:EFD94712.1;Name=EFD94712.1;gbkey=CDS;locus_tag=HMPREF0889_1451;product=hypothetical protein;protein_id=EFD94712.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 26225 26791 . - . ID=gene-HMPREF0889_1452;Name=HMPREF0889_1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1452 GCA_000177555.1|ADGP01000005.1 Genbank CDS 26225 26791 . - 0 ID=cds-EFD94713.1;Parent=gene-HMPREF0889_1452;Dbxref=NCBI_GP:EFD94713.1;Name=EFD94713.1;Note=identified by match to protein family HMM PF06810;gbkey=CDS;locus_tag=HMPREF0889_1452;product=phage minor structural protein GP20;protein_id=EFD94713.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 26926 27318 . - . ID=gene-HMPREF0889_1453;Name=HMPREF0889_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1453 GCA_000177555.1|ADGP01000005.1 Genbank CDS 26926 27318 . - 0 ID=cds-EFD94714.1;Parent=gene-HMPREF0889_1453;Dbxref=NCBI_GP:EFD94714.1;Name=EFD94714.1;gbkey=CDS;locus_tag=HMPREF0889_1453;product=hypothetical protein;protein_id=EFD94714.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 27325 27537 . - . ID=gene-HMPREF0889_1454;Name=HMPREF0889_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1454 GCA_000177555.1|ADGP01000005.1 Genbank CDS 27325 27537 . - 0 ID=cds-EFD94715.1;Parent=gene-HMPREF0889_1454;Dbxref=NCBI_GP:EFD94715.1;Name=EFD94715.1;gbkey=CDS;locus_tag=HMPREF0889_1454;product=hypothetical protein;protein_id=EFD94715.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 27597 27842 . - . ID=gene-HMPREF0889_1455;Name=HMPREF0889_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1455 GCA_000177555.1|ADGP01000005.1 Genbank CDS 27597 27842 . - 0 ID=cds-EFD94716.1;Parent=gene-HMPREF0889_1455;Dbxref=NCBI_GP:EFD94716.1;Name=EFD94716.1;gbkey=CDS;locus_tag=HMPREF0889_1455;product=hypothetical protein;protein_id=EFD94716.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 27845 28936 . - . ID=gene-HMPREF0889_1456;Name=HMPREF0889_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1456 GCA_000177555.1|ADGP01000005.1 Genbank CDS 27845 28936 . - 0 ID=cds-EFD94717.1;Parent=gene-HMPREF0889_1456;Dbxref=NCBI_GP:EFD94717.1;Name=EFD94717.1;Note=identified by match to protein family HMM PF04233%3B match to protein family HMM TIGR01641;gbkey=CDS;locus_tag=HMPREF0889_1456;product=phage protein F-like protein;protein_id=EFD94717.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 28997 29422 . - . ID=gene-HMPREF0889_1457;Name=HMPREF0889_1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1457 GCA_000177555.1|ADGP01000005.1 Genbank CDS 28997 29422 . - 0 ID=cds-EFD94718.1;Parent=gene-HMPREF0889_1457;Dbxref=NCBI_GP:EFD94718.1;Name=EFD94718.1;gbkey=CDS;locus_tag=HMPREF0889_1457;product=hypothetical protein;protein_id=EFD94718.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 29551 32004 . - . ID=gene-HMPREF0889_1458;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1458 GCA_000177555.1|ADGP01000005.1 Genbank CDS 29551 32004 . - 0 ID=cds-EFD94719.1;Parent=gene-HMPREF0889_1458;Dbxref=NCBI_GP:EFD94719.1;Name=EFD94719.1;Note=identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA;locus_tag=HMPREF0889_1458;product=DNA gyrase%2C A subunit;protein_id=EFD94719.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 32276 32998 . + . ID=gene-HMPREF0889_1459;Name=HMPREF0889_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1459 GCA_000177555.1|ADGP01000005.1 Genbank CDS 32276 32998 . + 0 ID=cds-EFD94720.1;Parent=gene-HMPREF0889_1459;Dbxref=NCBI_GP:EFD94720.1;Name=EFD94720.1;Note=identified by match to protein family HMM PF03009;gbkey=CDS;locus_tag=HMPREF0889_1459;product=glycerophosphodiester phosphodiesterase family protein;protein_id=EFD94720.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 33004 34368 . + . ID=gene-HMPREF0889_1460;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1460 GCA_000177555.1|ADGP01000005.1 Genbank CDS 33004 34368 . + 0 ID=cds-EFD94721.1;Parent=gene-HMPREF0889_1460;Dbxref=NCBI_GP:EFD94721.1;Name=EFD94721.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF0889_1460;product=amino acid carrier protein;protein_id=EFD94721.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 34489 34920 . + . ID=gene-HMPREF0889_1461;Name=HMPREF0889_1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1461 GCA_000177555.1|ADGP01000005.1 Genbank CDS 34489 34920 . + 0 ID=cds-EFD94722.1;Parent=gene-HMPREF0889_1461;Dbxref=NCBI_GP:EFD94722.1;Name=EFD94722.1;Note=identified by match to protein family HMM PF04304;gbkey=CDS;locus_tag=HMPREF0889_1461;product=hypothetical protein;protein_id=EFD94722.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 35015 36469 . - . ID=gene-HMPREF0889_1462;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=HMPREF0889_1462 GCA_000177555.1|ADGP01000005.1 Genbank CDS 35015 36469 . - 0 ID=cds-EFD94723.1;Parent=gene-HMPREF0889_1462;Dbxref=NCBI_GP:EFD94723.1;Name=EFD94723.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893;gbkey=CDS;gene=pepD;locus_tag=HMPREF0889_1462;product=Xaa-His dipeptidase;protein_id=EFD94723.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 36736 38808 . + . ID=gene-HMPREF0889_1463;Name=HMPREF0889_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1463 GCA_000177555.1|ADGP01000005.1 Genbank CDS 36736 38808 . + 0 ID=cds-EFD94724.1;Parent=gene-HMPREF0889_1463;Dbxref=NCBI_GP:EFD94724.1;Name=EFD94724.1;Note=identified by match to protein family HMM PF03169%3B match to protein family HMM TIGR00728%3B match to protein family HMM TIGR00733;gbkey=CDS;locus_tag=HMPREF0889_1463;product=oligopeptide transporter%2C OPT family;protein_id=EFD94724.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 39035 39862 . + . ID=gene-HMPREF0889_1465;Name=HMPREF0889_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1465 GCA_000177555.1|ADGP01000005.1 Genbank CDS 39035 39862 . + 0 ID=cds-EFD94725.1;Parent=gene-HMPREF0889_1465;Dbxref=NCBI_GP:EFD94725.1;Name=EFD94725.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF0889_1465;product=4Fe-4S binding domain protein;protein_id=EFD94725.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 39853 40449 . - . ID=gene-HMPREF0889_1464;Name=HMPREF0889_1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1464 GCA_000177555.1|ADGP01000005.1 Genbank CDS 39853 40449 . - 0 ID=cds-EFD94726.1;Parent=gene-HMPREF0889_1464;Dbxref=NCBI_GP:EFD94726.1;Name=EFD94726.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;locus_tag=HMPREF0889_1464;product=PAP2 family protein;protein_id=EFD94726.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 40654 41478 . + . ID=gene-HMPREF0889_1466;Name=HMPREF0889_1466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1466 GCA_000177555.1|ADGP01000005.1 Genbank CDS 40654 41478 . + 0 ID=cds-EFD94727.1;Parent=gene-HMPREF0889_1466;Dbxref=NCBI_GP:EFD94727.1;Name=EFD94727.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF0889_1466;product=putative glutamine ABC transporter periplasmic protein;protein_id=EFD94727.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 41596 42276 . + . ID=gene-HMPREF0889_1467;Name=HMPREF0889_1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1467 GCA_000177555.1|ADGP01000005.1 Genbank CDS 41596 42276 . + 0 ID=cds-EFD94728.1;Parent=gene-HMPREF0889_1467;Dbxref=NCBI_GP:EFD94728.1;Name=EFD94728.1;Note=identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364;gbkey=CDS;locus_tag=HMPREF0889_1467;product=protein ExsB;protein_id=EFD94728.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 42445 44190 . + . ID=gene-HMPREF0889_1468;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=HMPREF0889_1468 GCA_000177555.1|ADGP01000005.1 Genbank CDS 42445 44190 . + 0 ID=cds-EFD94729.1;Parent=gene-HMPREF0889_1468;Dbxref=NCBI_GP:EFD94729.1;Name=EFD94729.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk;locus_tag=HMPREF0889_1468;product=pyruvate kinase;protein_id=EFD94729.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 44249 46477 . - . ID=gene-HMPREF0889_1469;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF0889_1469 GCA_000177555.1|ADGP01000005.1 Genbank CDS 44249 46477 . - 0 ID=cds-EFD94730.1;Parent=gene-HMPREF0889_1469;Dbxref=NCBI_GP:EFD94730.1;Name=EFD94730.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF0889_1469;product=translation elongation factor G;protein_id=EFD94730.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 46865 48472 . + . ID=gene-HMPREF0889_1470;Name=HMPREF0889_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1470 GCA_000177555.1|ADGP01000005.1 Genbank CDS 46865 48472 . + 0 ID=cds-EFD94731.1;Parent=gene-HMPREF0889_1470;Dbxref=NCBI_GP:EFD94731.1;Name=EFD94731.1;Note=identified by match to protein family HMM PF02384;gbkey=CDS;locus_tag=HMPREF0889_1470;product=putative type I restriction-modification system%2C M subunit;protein_id=EFD94731.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 48743 49597 . + . ID=gene-HMPREF0889_1471;Name=HMPREF0889_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1471 GCA_000177555.1|ADGP01000005.1 Genbank CDS 48743 49597 . + 0 ID=cds-EFD94732.1;Parent=gene-HMPREF0889_1471;Dbxref=NCBI_GP:EFD94732.1;Name=EFD94732.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1471;product=hypothetical protein;protein_id=EFD94732.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 49601 52930 . + . ID=gene-HMPREF0889_1472;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=HMPREF0889_1472 GCA_000177555.1|ADGP01000005.1 Genbank CDS 49601 52930 . + 0 ID=cds-EFD94733.1;Parent=gene-HMPREF0889_1472;Dbxref=NCBI_GP:EFD94733.1;Name=EFD94733.1;Note=identified by match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348;gbkey=CDS;gene=hsdR;locus_tag=HMPREF0889_1472;product=type I site-specific deoxyribonuclease%2C HsdR family;protein_id=EFD94733.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 53209 54576 . + . ID=gene-HMPREF0889_1474;Name=HMPREF0889_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1474 GCA_000177555.1|ADGP01000005.1 Genbank CDS 53209 54576 . + 0 ID=cds-EFD94734.1;Parent=gene-HMPREF0889_1474;Dbxref=NCBI_GP:EFD94734.1;Name=EFD94734.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;locus_tag=HMPREF0889_1474;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EFD94734.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 54544 54678 . - . ID=gene-HMPREF0889_1473;Name=HMPREF0889_1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1473 GCA_000177555.1|ADGP01000005.1 Genbank CDS 54544 54678 . - 0 ID=cds-EFD94735.1;Parent=gene-HMPREF0889_1473;Dbxref=NCBI_GP:EFD94735.1;Name=EFD94735.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1473;product=hypothetical protein;protein_id=EFD94735.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 54743 55633 . + . ID=gene-HMPREF0889_1475;Name=HMPREF0889_1475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1475 GCA_000177555.1|ADGP01000005.1 Genbank CDS 54743 55633 . + 0 ID=cds-EFD94736.1;Parent=gene-HMPREF0889_1475;Dbxref=NCBI_GP:EFD94736.1;Name=EFD94736.1;Note=identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147;gbkey=CDS;locus_tag=HMPREF0889_1475;product=lipid kinase%2C YegS/Rv2252/BmrU family;protein_id=EFD94736.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 55698 57017 . - . ID=gene-HMPREF0889_1476;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=HMPREF0889_1476 GCA_000177555.1|ADGP01000005.1 Genbank CDS 55698 57017 . - 0 ID=cds-EFD94737.1;Parent=gene-HMPREF0889_1476;Dbxref=NCBI_GP:EFD94737.1;Name=EFD94737.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791;gbkey=CDS;gene=gntT;locus_tag=HMPREF0889_1476;product=high-affinity gluconate transporter;protein_id=EFD94737.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 56969 57088 . - . ID=gene-HMPREF0889_1477;Name=HMPREF0889_1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1477 GCA_000177555.1|ADGP01000005.1 Genbank CDS 56969 57088 . - 0 ID=cds-EFD94738.1;Parent=gene-HMPREF0889_1477;Dbxref=NCBI_GP:EFD94738.1;Name=EFD94738.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1477;product=hypothetical protein;protein_id=EFD94738.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 57115 57237 . - . ID=gene-HMPREF0889_1478;Name=HMPREF0889_1478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1478 GCA_000177555.1|ADGP01000005.1 Genbank CDS 57115 57237 . - 0 ID=cds-EFD94739.1;Parent=gene-HMPREF0889_1478;Dbxref=NCBI_GP:EFD94739.1;Name=EFD94739.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1478;product=hypothetical protein;protein_id=EFD94739.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 57282 58184 . + . ID=gene-HMPREF0889_1479;Name=HMPREF0889_1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1479 GCA_000177555.1|ADGP01000005.1 Genbank CDS 57282 58184 . + 0 ID=cds-EFD94740.1;Parent=gene-HMPREF0889_1479;Dbxref=NCBI_GP:EFD94740.1;Name=EFD94740.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF0889_1479;product=radical SAM domain protein;protein_id=EFD94740.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 58273 59205 . - . ID=gene-HMPREF0889_1480;Name=HMPREF0889_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1480 GCA_000177555.1|ADGP01000005.1 Genbank CDS 58273 59205 . - 0 ID=cds-EFD94741.1;Parent=gene-HMPREF0889_1480;Dbxref=NCBI_GP:EFD94741.1;Name=EFD94741.1;Note=identified by match to protein family HMM PF03547;gbkey=CDS;locus_tag=HMPREF0889_1480;product=transporter%2C auxin efflux carrier (AEC) family protein;protein_id=EFD94741.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 59236 60213 . - . ID=gene-HMPREF0889_1481;Name=HMPREF0889_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1481 GCA_000177555.1|ADGP01000005.1 Genbank CDS 59236 60213 . - 0 ID=cds-EFD94742.1;Parent=gene-HMPREF0889_1481;Dbxref=NCBI_GP:EFD94742.1;Name=EFD94742.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF0889_1481;product=metallo-beta-lactamase domain protein;protein_id=EFD94742.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 60326 60892 . - . ID=gene-HMPREF0889_1482;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=HMPREF0889_1482 GCA_000177555.1|ADGP01000005.1 Genbank CDS 60326 60892 . - 0 ID=cds-EFD94743.1;Parent=gene-HMPREF0889_1482;Dbxref=NCBI_GP:EFD94743.1;Name=EFD94743.1;Note=identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447;gbkey=CDS;gene=pth;locus_tag=HMPREF0889_1482;product=aminoacyl-tRNA hydrolase;protein_id=EFD94743.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 60911 61876 . - . ID=gene-HMPREF0889_1483;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=HMPREF0889_1483 GCA_000177555.1|ADGP01000005.1 Genbank CDS 60911 61876 . - 0 ID=cds-EFD94744.1;Parent=gene-HMPREF0889_1483;Dbxref=NCBI_GP:EFD94744.1;Name=EFD94744.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;gene=prs;locus_tag=HMPREF0889_1483;product=ribose-phosphate diphosphokinase;protein_id=EFD94744.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 61951 63324 . - . ID=gene-HMPREF0889_1484;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF0889_1484 GCA_000177555.1|ADGP01000005.1 Genbank CDS 61951 63324 . - 0 ID=cds-EFD94745.1;Parent=gene-HMPREF0889_1484;Dbxref=NCBI_GP:EFD94745.1;Name=EFD94745.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM PF01128%3B match to protein family HMM TIGR01173;gbkey=CDS;gene=glmU;locus_tag=HMPREF0889_1484;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=EFD94745.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 63362 63475 . - . ID=gene-HMPREF0889_1485;Name=HMPREF0889_1485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1485 GCA_000177555.1|ADGP01000005.1 Genbank CDS 63362 63475 . - 0 ID=cds-EFD94746.1;Parent=gene-HMPREF0889_1485;Dbxref=NCBI_GP:EFD94746.1;Name=EFD94746.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1485;product=hypothetical protein;protein_id=EFD94746.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 63494 64006 . - . ID=gene-HMPREF0889_1486;Name=HMPREF0889_1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1486 GCA_000177555.1|ADGP01000005.1 Genbank CDS 63494 64006 . - 0 ID=cds-EFD94747.1;Parent=gene-HMPREF0889_1486;Dbxref=NCBI_GP:EFD94747.1;Name=EFD94747.1;Note=identified by match to protein family HMM PF01471%3B match to protein family HMM PF06725;gbkey=CDS;locus_tag=HMPREF0889_1486;product=3D domain protein;protein_id=EFD94747.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 64114 64320 . + . ID=gene-HMPREF0889_1488;Name=HMPREF0889_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1488 GCA_000177555.1|ADGP01000005.1 Genbank CDS 64114 64320 . + 0 ID=cds-EFD94748.1;Parent=gene-HMPREF0889_1488;Dbxref=NCBI_GP:EFD94748.1;Name=EFD94748.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1488;product=hypothetical protein;protein_id=EFD94748.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 64307 65890 . - . ID=gene-HMPREF0889_1487;Name=HMPREF0889_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1487 GCA_000177555.1|ADGP01000005.1 Genbank CDS 64307 65890 . - 0 ID=cds-EFD94749.1;Parent=gene-HMPREF0889_1487;Dbxref=NCBI_GP:EFD94749.1;Name=EFD94749.1;Note=identified by match to protein family HMM PF00654%3B match to protein family HMM PF02080;gbkey=CDS;locus_tag=HMPREF0889_1487;product=chloride transporter%2C ClC family;protein_id=EFD94749.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 66044 67234 . + . ID=gene-HMPREF0889_1489;Name=HMPREF0889_1489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1489 GCA_000177555.1|ADGP01000005.1 Genbank CDS 66044 67234 . + 0 ID=cds-EFD94750.1;Parent=gene-HMPREF0889_1489;Dbxref=NCBI_GP:EFD94750.1;Name=EFD94750.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF0889_1489;product=amidohydrolase;protein_id=EFD94750.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 67474 68076 . - . ID=gene-HMPREF0889_1490;Name=HMPREF0889_1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1490 GCA_000177555.1|ADGP01000005.1 Genbank CDS 67474 68076 . - 0 ID=cds-EFD94751.1;Parent=gene-HMPREF0889_1490;Dbxref=NCBI_GP:EFD94751.1;Name=EFD94751.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1490;product=hypothetical protein;protein_id=EFD94751.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 70460 71725 . - . ID=gene-HMPREF0889_1491;Name=HMPREF0889_1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1491 GCA_000177555.1|ADGP01000005.1 Genbank CDS 70460 71725 . - 0 ID=cds-EFD94752.1;Parent=gene-HMPREF0889_1491;Dbxref=NCBI_GP:EFD94752.1;Name=EFD94752.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF0889_1491;product=Ser/Thr phosphatase family protein;protein_id=EFD94752.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 71718 73121 . - . ID=gene-HMPREF0889_1492;Name=HMPREF0889_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1492 GCA_000177555.1|ADGP01000005.1 Genbank CDS 71718 73121 . - 0 ID=cds-EFD94753.1;Parent=gene-HMPREF0889_1492;Dbxref=NCBI_GP:EFD94753.1;Name=EFD94753.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;locus_tag=HMPREF0889_1492;product=transcriptional regulator%2C GntR family;protein_id=EFD94753.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 73312 74304 . + . ID=gene-HMPREF0889_1494;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=HMPREF0889_1494 GCA_000177555.1|ADGP01000005.1 Genbank CDS 73312 74304 . + 0 ID=cds-EFD94754.1;Parent=gene-HMPREF0889_1494;Dbxref=NCBI_GP:EFD94754.1;Name=EFD94754.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433;gbkey=CDS;gene=bioB;locus_tag=HMPREF0889_1494;product=biotin synthase;protein_id=EFD94754.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 74289 75680 . - . ID=gene-HMPREF0889_1493;Name=HMPREF0889_1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1493 GCA_000177555.1|ADGP01000005.1 Genbank CDS 74289 75680 . - 0 ID=cds-EFD94755.1;Parent=gene-HMPREF0889_1493;Dbxref=NCBI_GP:EFD94755.1;Name=EFD94755.1;Note=identified by match to protein family HMM PF00349%3B match to protein family HMM PF03727;gbkey=CDS;locus_tag=HMPREF0889_1493;product=Hexokinase;protein_id=EFD94755.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 75847 76041 . + . ID=gene-HMPREF0889_1495;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=HMPREF0889_1495 GCA_000177555.1|ADGP01000005.1 Genbank CDS 75847 76041 . + 0 ID=cds-EFD94756.1;Parent=gene-HMPREF0889_1495;Dbxref=NCBI_GP:EFD94756.1;Name=EFD94756.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683;gbkey=CDS;gene=thiS;locus_tag=HMPREF0889_1495;product=thiamine biosynthesis protein ThiS;protein_id=EFD94756.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 76095 76865 . + . ID=gene-HMPREF0889_1496;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=HMPREF0889_1496 GCA_000177555.1|ADGP01000005.1 Genbank CDS 76095 76865 . + 0 ID=cds-EFD94757.1;Parent=gene-HMPREF0889_1496;Dbxref=NCBI_GP:EFD94757.1;Name=EFD94757.1;Note=identified by match to protein family HMM PF05690;gbkey=CDS;gene=thiG;locus_tag=HMPREF0889_1496;product=thiazole biosynthesis protein ThiG;protein_id=EFD94757.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 76880 78043 . + . ID=gene-HMPREF0889_1497;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=HMPREF0889_1497 GCA_000177555.1|ADGP01000005.1 Genbank CDS 76880 78043 . + 0 ID=cds-EFD94758.1;Parent=gene-HMPREF0889_1497;Dbxref=NCBI_GP:EFD94758.1;Name=EFD94758.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR02351;gbkey=CDS;gene=thiH;locus_tag=HMPREF0889_1497;product=thiazole biosynthesis protein ThiH;protein_id=EFD94758.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 78051 78164 . + . ID=gene-HMPREF0889_1498;Name=HMPREF0889_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1498 GCA_000177555.1|ADGP01000005.1 Genbank CDS 78051 78164 . + 0 ID=cds-EFD94759.1;Parent=gene-HMPREF0889_1498;Dbxref=NCBI_GP:EFD94759.1;Name=EFD94759.1;gbkey=CDS;locus_tag=HMPREF0889_1498;product=hypothetical protein;protein_id=EFD94759.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 78283 78891 . + . ID=gene-HMPREF0889_1499;Name=HMPREF0889_1499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1499 GCA_000177555.1|ADGP01000005.1 Genbank CDS 78283 78891 . + 0 ID=cds-EFD94760.1;Parent=gene-HMPREF0889_1499;Dbxref=NCBI_GP:EFD94760.1;Name=EFD94760.1;Note=identified by match to protein family HMM PF02581;gbkey=CDS;locus_tag=HMPREF0889_1499;product=putative thiamine-phosphate diphosphorylase;protein_id=EFD94760.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 78921 79397 . + . ID=gene-HMPREF0889_1500;Name=HMPREF0889_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1500 GCA_000177555.1|ADGP01000005.1 Genbank CDS 78921 79397 . + 0 ID=cds-EFD94761.1;Parent=gene-HMPREF0889_1500;Dbxref=NCBI_GP:EFD94761.1;Name=EFD94761.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1500;product=hypothetical protein;protein_id=EFD94761.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 79444 80043 . - . ID=gene-HMPREF0889_1501;Name=HMPREF0889_1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1501 GCA_000177555.1|ADGP01000005.1 Genbank CDS 79444 80043 . - 0 ID=cds-EFD94762.1;Parent=gene-HMPREF0889_1501;Dbxref=NCBI_GP:EFD94762.1;Name=EFD94762.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1501;product=hypothetical protein;protein_id=EFD94762.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 80058 81497 . - . ID=gene-HMPREF0889_1502;Name=HMPREF0889_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1502 GCA_000177555.1|ADGP01000005.1 Genbank CDS 80058 81497 . - 0 ID=cds-EFD94763.1;Parent=gene-HMPREF0889_1502;Dbxref=NCBI_GP:EFD94763.1;Name=EFD94763.1;gbkey=CDS;locus_tag=HMPREF0889_1502;product=hypothetical protein;protein_id=EFD94763.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 81560 82864 . - . ID=gene-HMPREF0889_1503;Name=cat;gbkey=Gene;gene=cat;gene_biotype=protein_coding;locus_tag=HMPREF0889_1503 GCA_000177555.1|ADGP01000005.1 Genbank CDS 81560 82864 . - 0 ID=cds-EFD94764.1;Parent=gene-HMPREF0889_1503;Dbxref=NCBI_GP:EFD94764.1;Name=EFD94764.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;gene=cat;locus_tag=HMPREF0889_1503;product=4-hydroxybutyrate coenzyme A transferase;protein_id=EFD94764.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 82956 84407 . - . ID=gene-HMPREF0889_1504;Name=HMPREF0889_1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1504 GCA_000177555.1|ADGP01000005.1 Genbank CDS 82956 84407 . - 0 ID=cds-EFD94765.1;Parent=gene-HMPREF0889_1504;Dbxref=NCBI_GP:EFD94765.1;Name=EFD94765.1;Note=identified by match to protein family HMM PF03241;gbkey=CDS;locus_tag=HMPREF0889_1504;product=4-hydroxyphenylacetate 3-hydroxylase family protein;protein_id=EFD94765.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 84564 84788 . + . ID=gene-HMPREF0889_1505;Name=HMPREF0889_1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1505 GCA_000177555.1|ADGP01000005.1 Genbank CDS 84564 84788 . + 0 ID=cds-EFD94766.1;Parent=gene-HMPREF0889_1505;Dbxref=NCBI_GP:EFD94766.1;Name=EFD94766.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1505;product=hypothetical protein;protein_id=EFD94766.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 84815 85099 . + . ID=gene-HMPREF0889_1506;Name=HMPREF0889_1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1506 GCA_000177555.1|ADGP01000005.1 Genbank CDS 84815 85099 . + 0 ID=cds-EFD94767.1;Parent=gene-HMPREF0889_1506;Dbxref=NCBI_GP:EFD94767.1;Name=EFD94767.1;Note=identified by match to protein family HMM PF01106;gbkey=CDS;locus_tag=HMPREF0889_1506;product=NifU-like protein;protein_id=EFD94767.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 85106 85768 . + . ID=gene-HMPREF0889_1507;Name=HMPREF0889_1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1507 GCA_000177555.1|ADGP01000005.1 Genbank CDS 85106 85768 . + 0 ID=cds-EFD94768.1;Parent=gene-HMPREF0889_1507;Dbxref=NCBI_GP:EFD94768.1;Name=EFD94768.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1507;product=hypothetical protein;protein_id=EFD94768.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 85792 86028 . + . ID=gene-HMPREF0889_1508;Name=HMPREF0889_1508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1508 GCA_000177555.1|ADGP01000005.1 Genbank CDS 85792 86028 . + 0 ID=cds-EFD94769.1;Parent=gene-HMPREF0889_1508;Dbxref=NCBI_GP:EFD94769.1;Name=EFD94769.1;gbkey=CDS;locus_tag=HMPREF0889_1508;product=hypothetical protein;protein_id=EFD94769.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 86031 86702 . + . ID=gene-HMPREF0889_1509;Name=HMPREF0889_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1509 GCA_000177555.1|ADGP01000005.1 Genbank CDS 86031 86702 . + 0 ID=cds-EFD94770.1;Parent=gene-HMPREF0889_1509;Dbxref=NCBI_GP:EFD94770.1;Name=EFD94770.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF0889_1509;product=metallo-beta-lactamase domain protein;protein_id=EFD94770.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 86686 87753 . + . ID=gene-HMPREF0889_1510;Name=luxE;gbkey=Gene;gene=luxE;gene_biotype=protein_coding;locus_tag=HMPREF0889_1510 GCA_000177555.1|ADGP01000005.1 Genbank CDS 86686 87753 . + 0 ID=cds-EFD94771.1;Parent=gene-HMPREF0889_1510;Dbxref=NCBI_GP:EFD94771.1;Name=EFD94771.1;Note=identified by match to protein family HMM PF04443;gbkey=CDS;gene=luxE;locus_tag=HMPREF0889_1510;product=Acyl-protein synthetase%2C LuxE;protein_id=EFD94771.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 87740 88921 . + . ID=gene-HMPREF0889_1511;Name=luxC;gbkey=Gene;gene=luxC;gene_biotype=protein_coding;locus_tag=HMPREF0889_1511 GCA_000177555.1|ADGP01000005.1 Genbank CDS 87740 88921 . + 0 ID=cds-EFD94772.1;Parent=gene-HMPREF0889_1511;Dbxref=NCBI_GP:EFD94772.1;Name=EFD94772.1;Note=identified by match to protein family HMM PF05893;gbkey=CDS;gene=luxC;locus_tag=HMPREF0889_1511;product=Acyl-CoA reductase (LuxC);protein_id=EFD94772.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 88934 90343 . + . ID=gene-HMPREF0889_1512;Name=HMPREF0889_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1512 GCA_000177555.1|ADGP01000005.1 Genbank CDS 88934 90343 . + 0 ID=cds-EFD94773.1;Parent=gene-HMPREF0889_1512;Dbxref=NCBI_GP:EFD94773.1;Name=EFD94773.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;locus_tag=HMPREF0889_1512;product=AMP-binding enzyme;protein_id=EFD94773.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 90442 91902 . + . ID=gene-HMPREF0889_1513;Name=HMPREF0889_1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1513 GCA_000177555.1|ADGP01000005.1 Genbank CDS 90442 91902 . + 0 ID=cds-EFD94774.1;Parent=gene-HMPREF0889_1513;Dbxref=NCBI_GP:EFD94774.1;Name=EFD94774.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF00989%3B match to protein family HMM TIGR00229;gbkey=CDS;locus_tag=HMPREF0889_1513;product=PAS domain S-box protein;protein_id=EFD94774.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 91967 92332 . + . ID=gene-HMPREF0889_1514;Name=HMPREF0889_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1514 GCA_000177555.1|ADGP01000005.1 Genbank CDS 91967 92332 . + 0 ID=cds-EFD94775.1;Parent=gene-HMPREF0889_1514;Dbxref=NCBI_GP:EFD94775.1;Name=EFD94775.1;Note=identified by match to protein family HMM PF02001;gbkey=CDS;locus_tag=HMPREF0889_1514;product=hypothetical protein;protein_id=EFD94775.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 92325 93161 . + . ID=gene-HMPREF0889_1515;Name=HMPREF0889_1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1515 GCA_000177555.1|ADGP01000005.1 Genbank CDS 92325 93161 . + 0 ID=cds-EFD94776.1;Parent=gene-HMPREF0889_1515;Dbxref=NCBI_GP:EFD94776.1;Name=EFD94776.1;gbkey=CDS;locus_tag=HMPREF0889_1515;product=nucleotide-binding protein;protein_id=EFD94776.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 93236 93847 . - . ID=gene-HMPREF0889_1516;Name=HMPREF0889_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1516 GCA_000177555.1|ADGP01000005.1 Genbank CDS 93236 93847 . - 0 ID=cds-EFD94777.1;Parent=gene-HMPREF0889_1516;Dbxref=NCBI_GP:EFD94777.1;Name=EFD94777.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1516;product=hypothetical protein;protein_id=EFD94777.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 94006 94146 . - . ID=gene-HMPREF0889_1517;Name=HMPREF0889_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1517 GCA_000177555.1|ADGP01000005.1 Genbank CDS 94006 94146 . - 0 ID=cds-EFD94778.1;Parent=gene-HMPREF0889_1517;Dbxref=NCBI_GP:EFD94778.1;Name=EFD94778.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1517;product=hypothetical protein;protein_id=EFD94778.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 94200 94496 . - . ID=gene-HMPREF0889_1518;Name=HMPREF0889_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1518 GCA_000177555.1|ADGP01000005.1 Genbank CDS 94200 94496 . - 0 ID=cds-EFD94779.1;Parent=gene-HMPREF0889_1518;Dbxref=NCBI_GP:EFD94779.1;Name=EFD94779.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1518;product=hypothetical protein;protein_id=EFD94779.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 94515 95681 . - . ID=gene-HMPREF0889_1519;Name=HMPREF0889_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1519 GCA_000177555.1|ADGP01000005.1 Genbank CDS 94515 95681 . - 0 ID=cds-EFD94780.1;Parent=gene-HMPREF0889_1519;Dbxref=NCBI_GP:EFD94780.1;Name=EFD94780.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;locus_tag=HMPREF0889_1519;product=putative DNA polymerase IV;protein_id=EFD94780.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 95997 96902 . + . ID=gene-HMPREF0889_1520;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=HMPREF0889_1520 GCA_000177555.1|ADGP01000005.1 Genbank CDS 95997 96902 . + 0 ID=cds-EFD94781.1;Parent=gene-HMPREF0889_1520;Dbxref=NCBI_GP:EFD94781.1;Name=EFD94781.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;gene=lysR;locus_tag=HMPREF0889_1520;product=LysR substrate binding domain protein;protein_id=EFD94781.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 97019 97144 . - . ID=gene-HMPREF0889_1521;Name=HMPREF0889_1521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1521 GCA_000177555.1|ADGP01000005.1 Genbank CDS 97019 97144 . - 0 ID=cds-EFD94782.1;Parent=gene-HMPREF0889_1521;Dbxref=NCBI_GP:EFD94782.1;Name=EFD94782.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1521;product=hypothetical protein;protein_id=EFD94782.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 97340 98218 . - . ID=gene-HMPREF0889_1522;Name=HMPREF0889_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1522 GCA_000177555.1|ADGP01000005.1 Genbank CDS 97340 98218 . - 0 ID=cds-EFD94783.1;Parent=gene-HMPREF0889_1522;Dbxref=NCBI_GP:EFD94783.1;Name=EFD94783.1;gbkey=CDS;locus_tag=HMPREF0889_1522;product=hypothetical protein;protein_id=EFD94783.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 98249 98668 . - . ID=gene-HMPREF0889_1523;Name=HMPREF0889_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1523 GCA_000177555.1|ADGP01000005.1 Genbank CDS 98249 98668 . - 0 ID=cds-EFD94784.1;Parent=gene-HMPREF0889_1523;Dbxref=NCBI_GP:EFD94784.1;Name=EFD94784.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1523;product=hypothetical protein;protein_id=EFD94784.1;transl_table=11 GCA_000177555.1|ADGP01000005.1 Genbank gene 98751 98864 . + . ID=gene-HMPREF0889_1524;Name=HMPREF0889_1524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1524 GCA_000177555.1|ADGP01000005.1 Genbank CDS 98751 98864 . + 0 ID=cds-EFD94785.1;Parent=gene-HMPREF0889_1524;Dbxref=NCBI_GP:EFD94785.1;Name=EFD94785.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_1524;product=hypothetical protein;protein_id=EFD94785.1;transl_table=11 ##sequence-region ADGP01000004.1 1 1959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000004.1 Genbank region 1 1959 . + . ID=ADGP01000004.1:1..1959;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000004.1 Genbank gene 1 1957 . - . ID=gene-HMPREF0889_0121;Name=HMPREF0889_0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0121;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000004.1 Genbank CDS 1 1957 . - 0 ID=cds-EFD94786.1;Parent=gene-HMPREF0889_0121;Dbxref=NCBI_GP:EFD94786.1;Name=EFD94786.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_0121;partial=true;product=Hep/Hag repeat protein;protein_id=EFD94786.1;start_range=.,1;transl_table=11 ##sequence-region ADGP01000003.1 1 43346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000003.1 Genbank region 1 43346 . + . ID=ADGP01000003.1:1..43346;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000003.1 Genbank gene 20 625 . - . ID=gene-HMPREF0889_0938;Name=HMPREF0889_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0938 GCA_000177555.1|ADGP01000003.1 Genbank CDS 20 625 . - 0 ID=cds-EFD94787.1;Parent=gene-HMPREF0889_0938;Dbxref=NCBI_GP:EFD94787.1;Name=EFD94787.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01966;gbkey=CDS;locus_tag=HMPREF0889_0938;product=HD domain protein;protein_id=EFD94787.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 654 1148 . - . ID=gene-HMPREF0889_0939;Name=HMPREF0889_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0939 GCA_000177555.1|ADGP01000003.1 Genbank CDS 654 1148 . - 0 ID=cds-EFD94788.1;Parent=gene-HMPREF0889_0939;Dbxref=NCBI_GP:EFD94788.1;Name=EFD94788.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0939;product=hypothetical protein;protein_id=EFD94788.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 1178 1312 . - . ID=gene-HMPREF0889_0940;Name=HMPREF0889_0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0940 GCA_000177555.1|ADGP01000003.1 Genbank CDS 1178 1312 . - 0 ID=cds-EFD94789.1;Parent=gene-HMPREF0889_0940;Dbxref=NCBI_GP:EFD94789.1;Name=EFD94789.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0940;product=hypothetical protein;protein_id=EFD94789.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 1597 1986 . + . ID=gene-HMPREF0889_0941;Name=HMPREF0889_0941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0941 GCA_000177555.1|ADGP01000003.1 Genbank CDS 1597 1986 . + 0 ID=cds-EFD94790.1;Parent=gene-HMPREF0889_0941;Dbxref=NCBI_GP:EFD94790.1;Name=EFD94790.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF0889_0941;product=DNA-binding helix-turn-helix protein;protein_id=EFD94790.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 2115 2189 . - . ID=gene-HMPREF0889_0942;Name=HMPREF0889_0942;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0942 GCA_000177555.1|ADGP01000003.1 Genbank tRNA 2115 2189 . - . ID=rna-HMPREF0889_0942;Parent=gene-HMPREF0889_0942;gbkey=tRNA;locus_tag=HMPREF0889_0942;product=tRNA-Arg GCA_000177555.1|ADGP01000003.1 Genbank exon 2115 2189 . - . ID=exon-HMPREF0889_0942-1;Parent=rna-HMPREF0889_0942;gbkey=tRNA;locus_tag=HMPREF0889_0942;product=tRNA-Arg GCA_000177555.1|ADGP01000003.1 Genbank gene 2389 3144 . + . ID=gene-HMPREF0889_0943;Name=HMPREF0889_0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0943 GCA_000177555.1|ADGP01000003.1 Genbank CDS 2389 3144 . + 0 ID=cds-EFD94791.1;Parent=gene-HMPREF0889_0943;Dbxref=NCBI_GP:EFD94791.1;Name=EFD94791.1;Note=identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237;gbkey=CDS;locus_tag=HMPREF0889_0943;product=ThiF family protein;protein_id=EFD94791.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 3234 3419 . + . ID=gene-HMPREF0889_0944;Name=HMPREF0889_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0944 GCA_000177555.1|ADGP01000003.1 Genbank CDS 3234 3419 . + 0 ID=cds-EFD94792.1;Parent=gene-HMPREF0889_0944;Dbxref=NCBI_GP:EFD94792.1;Name=EFD94792.1;gbkey=CDS;locus_tag=HMPREF0889_0944;product=hypothetical protein;protein_id=EFD94792.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 3451 4437 . + . ID=gene-HMPREF0889_0945;Name=HMPREF0889_0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0945 GCA_000177555.1|ADGP01000003.1 Genbank CDS 3451 4437 . + 0 ID=cds-EFD94793.1;Parent=gene-HMPREF0889_0945;Dbxref=NCBI_GP:EFD94793.1;Name=EFD94793.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF0889_0945;product=periplasmic binding protein;protein_id=EFD94793.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 4424 5434 . + . ID=gene-HMPREF0889_0946;Name=HMPREF0889_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0946 GCA_000177555.1|ADGP01000003.1 Genbank CDS 4424 5434 . + 0 ID=cds-EFD94794.1;Parent=gene-HMPREF0889_0946;Dbxref=NCBI_GP:EFD94794.1;Name=EFD94794.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF0889_0946;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EFD94794.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 5437 6228 . + . ID=gene-HMPREF0889_0947;Name=HMPREF0889_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0947 GCA_000177555.1|ADGP01000003.1 Genbank CDS 5437 6228 . + 0 ID=cds-EFD94795.1;Parent=gene-HMPREF0889_0947;Dbxref=NCBI_GP:EFD94795.1;Name=EFD94795.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF0889_0947;product=ABC transporter%2C ATP-binding protein;protein_id=EFD94795.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 6320 7120 . + . ID=gene-HMPREF0889_0948;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=HMPREF0889_0948 GCA_000177555.1|ADGP01000003.1 Genbank CDS 6320 7120 . + 0 ID=cds-EFD94796.1;Parent=gene-HMPREF0889_0948;Dbxref=NCBI_GP:EFD94796.1;Name=EFD94796.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01465;gbkey=CDS;gene=cobM;locus_tag=HMPREF0889_0948;product=precorrin-4 C(11)-methyltransferase;protein_id=EFD94796.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 7113 8180 . + . ID=gene-HMPREF0889_0949;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0949 GCA_000177555.1|ADGP01000003.1 Genbank CDS 7113 8180 . + 0 ID=cds-EFD94797.1;Parent=gene-HMPREF0889_0949;Dbxref=NCBI_GP:EFD94797.1;Name=EFD94797.1;Note=identified by match to protein family HMM PF01890;gbkey=CDS;gene=cbiG;locus_tag=HMPREF0889_0949;product=CbiG;protein_id=EFD94797.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 8177 8923 . + . ID=gene-HMPREF0889_0950;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=HMPREF0889_0950 GCA_000177555.1|ADGP01000003.1 Genbank CDS 8177 8923 . + 0 ID=cds-EFD94798.1;Parent=gene-HMPREF0889_0950;Dbxref=NCBI_GP:EFD94798.1;Name=EFD94798.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01466;gbkey=CDS;gene=cobJ;locus_tag=HMPREF0889_0950;product=precorrin-3B C(17)-methyltransferase;protein_id=EFD94798.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 8920 9687 . + . ID=gene-HMPREF0889_0951;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=HMPREF0889_0951 GCA_000177555.1|ADGP01000003.1 Genbank CDS 8920 9687 . + 0 ID=cds-EFD94799.1;Parent=gene-HMPREF0889_0951;Dbxref=NCBI_GP:EFD94799.1;Name=EFD94799.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02571%3B match to protein family HMM TIGR00715;gbkey=CDS;gene=cobK;locus_tag=HMPREF0889_0951;product=precorrin-6A reductase;protein_id=EFD94799.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 9684 10904 . + . ID=gene-HMPREF0889_0952;Name=cbiT;gbkey=Gene;gene=cbiT;gene_biotype=protein_coding;locus_tag=HMPREF0889_0952 GCA_000177555.1|ADGP01000003.1 Genbank CDS 9684 10904 . + 0 ID=cds-EFD94800.1;Parent=gene-HMPREF0889_0952;Dbxref=NCBI_GP:EFD94800.1;Name=EFD94800.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR02467%3B match to protein family HMM TIGR02469;gbkey=CDS;gene=cbiT;locus_tag=HMPREF0889_0952;product=precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit;protein_id=EFD94800.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 10891 12276 . + . ID=gene-HMPREF0889_0953;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0953 GCA_000177555.1|ADGP01000003.1 Genbank CDS 10891 12276 . + 0 ID=cds-EFD94801.1;Parent=gene-HMPREF0889_0953;Dbxref=NCBI_GP:EFD94801.1;Name=EFD94801.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379;gbkey=CDS;gene=cobB;locus_tag=HMPREF0889_0953;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=EFD94801.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 12273 12908 . + . ID=gene-HMPREF0889_0954;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=HMPREF0889_0954 GCA_000177555.1|ADGP01000003.1 Genbank CDS 12273 12908 . + 0 ID=cds-EFD94802.1;Parent=gene-HMPREF0889_0954;Dbxref=NCBI_GP:EFD94802.1;Name=EFD94802.1;Note=identified by match to protein family HMM PF02570;gbkey=CDS;gene=cobH;locus_tag=HMPREF0889_0954;product=precorrin-8X methylmutase;protein_id=EFD94802.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 12984 13310 . + . ID=gene-HMPREF0889_0955;Name=HMPREF0889_0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0955 GCA_000177555.1|ADGP01000003.1 Genbank CDS 12984 13310 . + 0 ID=cds-EFD94803.1;Parent=gene-HMPREF0889_0955;Dbxref=NCBI_GP:EFD94803.1;Name=EFD94803.1;Note=identified by match to protein family HMM PF04297%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281;gbkey=CDS;locus_tag=HMPREF0889_0955;product=helix-turn-helix protein%2C YlxM/p13 family;protein_id=EFD94803.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 13321 14676 . + . ID=gene-HMPREF0889_0956;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=HMPREF0889_0956 GCA_000177555.1|ADGP01000003.1 Genbank CDS 13321 14676 . + 0 ID=cds-EFD94804.1;Parent=gene-HMPREF0889_0956;Dbxref=NCBI_GP:EFD94804.1;Name=EFD94804.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;locus_tag=HMPREF0889_0956;product=signal recognition particle protein;protein_id=EFD94804.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 14713 14982 . + . ID=gene-HMPREF0889_0957;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF0889_0957 GCA_000177555.1|ADGP01000003.1 Genbank CDS 14713 14982 . + 0 ID=cds-EFD94805.1;Parent=gene-HMPREF0889_0957;Dbxref=NCBI_GP:EFD94805.1;Name=EFD94805.1;Note=identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002;gbkey=CDS;gene=rpsP;locus_tag=HMPREF0889_0957;product=ribosomal protein S16;protein_id=EFD94805.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 14996 15223 . + . ID=gene-HMPREF0889_0958;Name=HMPREF0889_0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0958 GCA_000177555.1|ADGP01000003.1 Genbank CDS 14996 15223 . + 0 ID=cds-EFD94806.1;Parent=gene-HMPREF0889_0958;Dbxref=NCBI_GP:EFD94806.1;Name=EFD94806.1;gbkey=CDS;locus_tag=HMPREF0889_0958;product=hypothetical protein;protein_id=EFD94806.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 15232 15639 . + . ID=gene-HMPREF0889_0959;Name=HMPREF0889_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0959 GCA_000177555.1|ADGP01000003.1 Genbank CDS 15232 15639 . + 0 ID=cds-EFD94807.1;Parent=gene-HMPREF0889_0959;Dbxref=NCBI_GP:EFD94807.1;Name=EFD94807.1;gbkey=CDS;locus_tag=HMPREF0889_0959;product=hypothetical protein;protein_id=EFD94807.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 15644 16147 . + . ID=gene-HMPREF0889_0960;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=HMPREF0889_0960 GCA_000177555.1|ADGP01000003.1 Genbank CDS 15644 16147 . + 0 ID=cds-EFD94808.1;Parent=gene-HMPREF0889_0960;Dbxref=NCBI_GP:EFD94808.1;Name=EFD94808.1;Note=identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273;gbkey=CDS;gene=rimM;locus_tag=HMPREF0889_0960;product=16S rRNA processing protein RimM;protein_id=EFD94808.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 16144 16875 . + . ID=gene-HMPREF0889_0961;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0961 GCA_000177555.1|ADGP01000003.1 Genbank CDS 16144 16875 . + 0 ID=cds-EFD94809.1;Parent=gene-HMPREF0889_0961;Dbxref=NCBI_GP:EFD94809.1;Name=EFD94809.1;Note=identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088;gbkey=CDS;gene=trmD;locus_tag=HMPREF0889_0961;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=EFD94809.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 16878 17450 . + . ID=gene-HMPREF0889_0962;Name=HMPREF0889_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0962 GCA_000177555.1|ADGP01000003.1 Genbank CDS 16878 17450 . + 0 ID=cds-EFD94810.1;Parent=gene-HMPREF0889_0962;Dbxref=NCBI_GP:EFD94810.1;Name=EFD94810.1;gbkey=CDS;locus_tag=HMPREF0889_0962;product=hypothetical protein;protein_id=EFD94810.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 17465 18190 . + . ID=gene-HMPREF0889_0963;Name=HMPREF0889_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0963 GCA_000177555.1|ADGP01000003.1 Genbank CDS 17465 18190 . + 0 ID=cds-EFD94811.1;Parent=gene-HMPREF0889_0963;Dbxref=NCBI_GP:EFD94811.1;Name=EFD94811.1;Note=identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;locus_tag=HMPREF0889_0963;product=DNA-binding regulatory protein%2C YebC/PmpR family;protein_id=EFD94811.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 18687 19655 . - . ID=gene-HMPREF0889_0964;Name=HMPREF0889_0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0964 GCA_000177555.1|ADGP01000003.1 Genbank CDS 18687 19655 . - 0 ID=cds-EFD94812.1;Parent=gene-HMPREF0889_0964;Dbxref=NCBI_GP:EFD94812.1;Name=EFD94812.1;gbkey=CDS;locus_tag=HMPREF0889_0964;product=hypothetical protein;protein_id=EFD94812.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 19779 20357 . - . ID=gene-HMPREF0889_0965;Name=HMPREF0889_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0965 GCA_000177555.1|ADGP01000003.1 Genbank CDS 19779 20357 . - 0 ID=cds-EFD94813.1;Parent=gene-HMPREF0889_0965;Dbxref=NCBI_GP:EFD94813.1;Name=EFD94813.1;gbkey=CDS;locus_tag=HMPREF0889_0965;product=hypothetical protein;protein_id=EFD94813.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 20604 22136 . + . ID=gene-HMPREF0889_0966;Name=HMPREF0889_0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0966 GCA_000177555.1|ADGP01000003.1 Genbank CDS 20604 22136 . + 0 ID=cds-EFD94814.1;Parent=gene-HMPREF0889_0966;Dbxref=NCBI_GP:EFD94814.1;Name=EFD94814.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;locus_tag=HMPREF0889_0966;product=putative exopolyphosphatase;protein_id=EFD94814.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 22243 22518 . - . ID=gene-HMPREF0889_0967;Name=HMPREF0889_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0967 GCA_000177555.1|ADGP01000003.1 Genbank CDS 22243 22518 . - 0 ID=cds-EFD94815.1;Parent=gene-HMPREF0889_0967;Dbxref=NCBI_GP:EFD94815.1;Name=EFD94815.1;gbkey=CDS;locus_tag=HMPREF0889_0967;product=hypothetical protein;protein_id=EFD94815.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 22543 23175 . - . ID=gene-HMPREF0889_0968;Name=HMPREF0889_0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0968 GCA_000177555.1|ADGP01000003.1 Genbank CDS 22543 23175 . - 0 ID=cds-EFD94816.1;Parent=gene-HMPREF0889_0968;Dbxref=NCBI_GP:EFD94816.1;Name=EFD94816.1;Note=identified by match to protein family HMM PF00596;gbkey=CDS;locus_tag=HMPREF0889_0968;product=putative L-ribulose-5-phosphate 4-epimerase;protein_id=EFD94816.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 23220 23996 . - . ID=gene-HMPREF0889_0969;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0969 GCA_000177555.1|ADGP01000003.1 Genbank CDS 23220 23996 . - 0 ID=cds-EFD94817.1;Parent=gene-HMPREF0889_0969;Dbxref=NCBI_GP:EFD94817.1;Name=EFD94817.1;Note=identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03331;gbkey=CDS;gene=speD;locus_tag=HMPREF0889_0969;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=EFD94817.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 24195 24782 . - . ID=gene-HMPREF0889_0970;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=HMPREF0889_0970 GCA_000177555.1|ADGP01000003.1 Genbank CDS 24195 24782 . - 0 ID=cds-EFD94818.1;Parent=gene-HMPREF0889_0970;Dbxref=NCBI_GP:EFD94818.1;Name=EFD94818.1;Note=identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;gene=rdgB;locus_tag=HMPREF0889_0970;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;protein_id=EFD94818.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 24793 25449 . - . ID=gene-HMPREF0889_0971;Name=HMPREF0889_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0971 GCA_000177555.1|ADGP01000003.1 Genbank CDS 24793 25449 . - 0 ID=cds-EFD94819.1;Parent=gene-HMPREF0889_0971;Dbxref=NCBI_GP:EFD94819.1;Name=EFD94819.1;gbkey=CDS;locus_tag=HMPREF0889_0971;product=hypothetical protein;protein_id=EFD94819.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 25464 26006 . - . ID=gene-HMPREF0889_0972;Name=HMPREF0889_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0972 GCA_000177555.1|ADGP01000003.1 Genbank CDS 25464 26006 . - 0 ID=cds-EFD94820.1;Parent=gene-HMPREF0889_0972;Dbxref=NCBI_GP:EFD94820.1;Name=EFD94820.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0972;product=hypothetical protein;protein_id=EFD94820.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 26045 26848 . - . ID=gene-HMPREF0889_0973;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=HMPREF0889_0973 GCA_000177555.1|ADGP01000003.1 Genbank CDS 26045 26848 . - 0 ID=cds-EFD94821.1;Parent=gene-HMPREF0889_0973;Dbxref=NCBI_GP:EFD94821.1;Name=EFD94821.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;locus_tag=HMPREF0889_0973;product=glutamate racemase;protein_id=EFD94821.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 26861 27277 . - . ID=gene-HMPREF0889_0974;Name=HMPREF0889_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0974 GCA_000177555.1|ADGP01000003.1 Genbank CDS 26861 27277 . - 0 ID=cds-EFD94822.1;Parent=gene-HMPREF0889_0974;Dbxref=NCBI_GP:EFD94822.1;Name=EFD94822.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051;gbkey=CDS;locus_tag=HMPREF0889_0974;product=acyl-CoA thioester hydrolase%2C YbgC/YbaW family;protein_id=EFD94822.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 27577 28452 . + . ID=gene-HMPREF0889_0975;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=HMPREF0889_0975 GCA_000177555.1|ADGP01000003.1 Genbank CDS 27577 28452 . + 0 ID=cds-EFD94823.1;Parent=gene-HMPREF0889_0975;Dbxref=NCBI_GP:EFD94823.1;Name=EFD94823.1;Note=identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081;gbkey=CDS;gene=purC;locus_tag=HMPREF0889_0975;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=EFD94823.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 28445 28564 . + . ID=gene-HMPREF0889_0976;Name=HMPREF0889_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0976 GCA_000177555.1|ADGP01000003.1 Genbank CDS 28445 28564 . + 0 ID=cds-EFD94824.1;Parent=gene-HMPREF0889_0976;Dbxref=NCBI_GP:EFD94824.1;Name=EFD94824.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF0889_0976;product=hypothetical protein;protein_id=EFD94824.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 28589 29578 . - . ID=gene-HMPREF0889_0977;Name=HMPREF0889_0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0977 GCA_000177555.1|ADGP01000003.1 Genbank CDS 28589 29578 . - 0 ID=cds-EFD94825.1;Parent=gene-HMPREF0889_0977;Dbxref=NCBI_GP:EFD94825.1;Name=EFD94825.1;Note=identified by match to protein family HMM PF01384;gbkey=CDS;locus_tag=HMPREF0889_0977;product=phosphate transporter family protein;protein_id=EFD94825.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 29571 30200 . - . ID=gene-HMPREF0889_0978;Name=HMPREF0889_0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0978 GCA_000177555.1|ADGP01000003.1 Genbank CDS 29571 30200 . - 0 ID=cds-EFD94826.1;Parent=gene-HMPREF0889_0978;Dbxref=NCBI_GP:EFD94826.1;Name=EFD94826.1;Note=identified by match to protein family HMM PF01865;gbkey=CDS;locus_tag=HMPREF0889_0978;product=hypothetical protein;protein_id=EFD94826.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 30461 31747 . - . ID=gene-HMPREF0889_0979;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0979 GCA_000177555.1|ADGP01000003.1 Genbank CDS 30461 31747 . - 0 ID=cds-EFD94827.1;Parent=gene-HMPREF0889_0979;Dbxref=NCBI_GP:EFD94827.1;Name=EFD94827.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877;gbkey=CDS;gene=purD;locus_tag=HMPREF0889_0979;product=phosphoribosylamine--glycine ligase;protein_id=EFD94827.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 31744 32349 . - . ID=gene-HMPREF0889_0980;Name=HMPREF0889_0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0980 GCA_000177555.1|ADGP01000003.1 Genbank CDS 31744 32349 . - 0 ID=cds-EFD94828.1;Parent=gene-HMPREF0889_0980;Dbxref=NCBI_GP:EFD94828.1;Name=EFD94828.1;Note=identified by match to protein family HMM PF02142;gbkey=CDS;locus_tag=HMPREF0889_0980;product=MGS-like domain protein;protein_id=EFD94828.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 32349 32975 . - . ID=gene-HMPREF0889_0981;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=HMPREF0889_0981 GCA_000177555.1|ADGP01000003.1 Genbank CDS 32349 32975 . - 0 ID=cds-EFD94829.1;Parent=gene-HMPREF0889_0981;Dbxref=NCBI_GP:EFD94829.1;Name=EFD94829.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639;gbkey=CDS;gene=purN;locus_tag=HMPREF0889_0981;product=phosphoribosylglycinamide formyltransferase;protein_id=EFD94829.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 32968 34035 . - . ID=gene-HMPREF0889_0982;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=HMPREF0889_0982 GCA_000177555.1|ADGP01000003.1 Genbank CDS 32968 34035 . - 0 ID=cds-EFD94830.1;Parent=gene-HMPREF0889_0982;Dbxref=NCBI_GP:EFD94830.1;Name=EFD94830.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878;gbkey=CDS;gene=purM;locus_tag=HMPREF0889_0982;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=EFD94830.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 34013 35440 . - . ID=gene-HMPREF0889_0983;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=HMPREF0889_0983 GCA_000177555.1|ADGP01000003.1 Genbank CDS 34013 35440 . - 0 ID=cds-EFD94831.1;Parent=gene-HMPREF0889_0983;Dbxref=NCBI_GP:EFD94831.1;Name=EFD94831.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134;gbkey=CDS;gene=purF;locus_tag=HMPREF0889_0983;product=amidophosphoribosyltransferase;protein_id=EFD94831.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 35465 35860 . - . ID=gene-HMPREF0889_0984;Name=HMPREF0889_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0984 GCA_000177555.1|ADGP01000003.1 Genbank CDS 35465 35860 . - 0 ID=cds-EFD94832.1;Parent=gene-HMPREF0889_0984;Dbxref=NCBI_GP:EFD94832.1;Name=EFD94832.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00731;gbkey=CDS;locus_tag=HMPREF0889_0984;product=phosphoribosylaminoimidazole carboxylase;protein_id=EFD94832.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 36167 37081 . - . ID=gene-HMPREF0889_0985;Name=HMPREF0889_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0985 GCA_000177555.1|ADGP01000003.1 Genbank CDS 36167 37081 . - 0 ID=cds-EFD94833.1;Parent=gene-HMPREF0889_0985;Dbxref=NCBI_GP:EFD94833.1;Name=EFD94833.1;Note=identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;locus_tag=HMPREF0889_0985;product=dihydroorotate dehydrogenase 1B;protein_id=EFD94833.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 37078 37914 . - . ID=gene-HMPREF0889_0986;Name=HMPREF0889_0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0986 GCA_000177555.1|ADGP01000003.1 Genbank CDS 37078 37914 . - 0 ID=cds-EFD94834.1;Parent=gene-HMPREF0889_0986;Dbxref=NCBI_GP:EFD94834.1;Name=EFD94834.1;Note=identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;locus_tag=HMPREF0889_0986;product=oxidoreductase%2C FAD-binding protein;protein_id=EFD94834.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 37971 38045 . - . ID=gene-HMPREF0889_0987;Name=HMPREF0889_0987;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF0889_0987 GCA_000177555.1|ADGP01000003.1 Genbank tRNA 37971 38045 . - . ID=rna-HMPREF0889_0987;Parent=gene-HMPREF0889_0987;gbkey=tRNA;locus_tag=HMPREF0889_0987;product=tRNA-Met GCA_000177555.1|ADGP01000003.1 Genbank exon 37971 38045 . - . ID=exon-HMPREF0889_0987-1;Parent=rna-HMPREF0889_0987;gbkey=tRNA;locus_tag=HMPREF0889_0987;product=tRNA-Met GCA_000177555.1|ADGP01000003.1 Genbank gene 38109 39380 . - . ID=gene-HMPREF0889_0988;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=HMPREF0889_0988 GCA_000177555.1|ADGP01000003.1 Genbank CDS 38109 39380 . - 0 ID=cds-EFD94835.1;Parent=gene-HMPREF0889_0988;Dbxref=NCBI_GP:EFD94835.1;Name=EFD94835.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoD;locus_tag=HMPREF0889_0988;product=RNA polymerase sigma factor RpoD;protein_id=EFD94835.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 39386 41197 . - . ID=gene-HMPREF0889_0989;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HMPREF0889_0989 GCA_000177555.1|ADGP01000003.1 Genbank CDS 39386 41197 . - 0 ID=cds-EFD94836.1;Parent=gene-HMPREF0889_0989;Dbxref=NCBI_GP:EFD94836.1;Name=EFD94836.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391;gbkey=CDS;gene=dnaG;locus_tag=HMPREF0889_0989;product=DNA primase;protein_id=EFD94836.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 41399 42304 . + . ID=gene-HMPREF0889_0990;Name=HMPREF0889_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_0990 GCA_000177555.1|ADGP01000003.1 Genbank CDS 41399 42304 . + 0 ID=cds-EFD94837.1;Parent=gene-HMPREF0889_0990;Dbxref=NCBI_GP:EFD94837.1;Name=EFD94837.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF0889_0990;product=pseudouridine synthase%2C RluA family;protein_id=EFD94837.1;transl_table=11 GCA_000177555.1|ADGP01000003.1 Genbank gene 42317 43282 . + . ID=gene-HMPREF0889_0991;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=HMPREF0889_0991 GCA_000177555.1|ADGP01000003.1 Genbank CDS 42317 43282 . + 0 ID=cds-EFD94838.1;Parent=gene-HMPREF0889_0991;Dbxref=NCBI_GP:EFD94838.1;Name=EFD94838.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859;gbkey=CDS;gene=fba;locus_tag=HMPREF0889_0991;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=EFD94838.1;transl_table=11 ##sequence-region ADGP01000002.1 1 3098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000002.1 Genbank region 1 3098 . + . ID=ADGP01000002.1:1..3098;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000002.1 Genbank gene 54 2966 . - . ID=gene-HMPREF0889_1689;Name=rrl;gbkey=Gene;gene=rrl;gene_biotype=rRNA;locus_tag=HMPREF0889_1689 GCA_000177555.1|ADGP01000002.1 Genbank rRNA 54 2966 . - . ID=rna-HMPREF0889_1689;Parent=gene-HMPREF0889_1689;gbkey=rRNA;gene=rrl;locus_tag=HMPREF0889_1689;product=23S ribosomal RNA GCA_000177555.1|ADGP01000002.1 Genbank exon 54 2966 . - . ID=exon-HMPREF0889_1689-1;Parent=rna-HMPREF0889_1689;gbkey=rRNA;gene=rrl;locus_tag=HMPREF0889_1689;product=23S ribosomal RNA ##sequence-region ADGP01000001.1 1 987 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568 GCA_000177555.1|ADGP01000001.1 Genbank region 1 987 . + . ID=ADGP01000001.1:1..987;Dbxref=taxon:1000568;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera genomosp. type_1 str. 28L;strain=28L GCA_000177555.1|ADGP01000001.1 Genbank gene 1 979 . - . ID=gene-HMPREF0889_1690;Name=HMPREF0889_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF0889_1690;partial=true;start_range=.,1 GCA_000177555.1|ADGP01000001.1 Genbank CDS 1 979 . - 0 ID=cds-EFD94839.1;Parent=gene-HMPREF0889_1690;Dbxref=NCBI_GP:EFD94839.1;Name=EFD94839.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF0889_1690;partial=true;product=hemagglutinin;protein_id=EFD94839.1;start_range=.,1;transl_table=11 ###