##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM22208v2 #!genome-build-accession NCBI_Assembly:GCA_000222085.2 ##sequence-region AFQR01000053.1 1 2918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000053.1 Genbank region 1 2918 . + . ID=AFQR01000053.1:1..2918;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000053.1 Genbank sequence_feature 1196 1205 . + . ID=id-AFQR01000053.1:1196..1205;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000053.1 Genbank sequence_feature 1273 1282 . - . ID=id-AFQR01000053.1:1273..1282;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000053.1 Genbank sequence_feature 1279 1300 . + . ID=id-AFQR01000053.1:1279..1300;Note=transmembrane_regions;gbkey=misc_feature ##sequence-region AFQR01000052.1 1 5569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000052.1 Genbank region 1 5569 . + . ID=AFQR01000052.1:1..5569;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000052.1 Genbank sequence_feature 1758 1767 . + . ID=id-AFQR01000052.1:1758..1767;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000052.1 Genbank sequence_feature 1764 1785 . - . ID=id-AFQR01000052.1:1764..1785;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000052.1 Genbank sequence_feature 1895 1904 . - . ID=id-AFQR01000052.1:1895..1904;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000052.1 Genbank gene 4065 4280 . + . ID=gene-GGE_2223;Name=GGE_2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2223 GCA_000222085.2|AFQR01000052.1 Genbank CDS 4065 4280 . + 0 ID=cds-EGT78465.1;Parent=gene-GGE_2223;Dbxref=GeneID:212633116,NCBI_GP:EGT78465.1;Name=EGT78465.1;Note=YP_002309641~swp_0211;gbkey=CDS;locus_tag=GGE_2223;product=Hypothetical protein;protein_id=EGT78465.1;transl_table=11 GCA_000222085.2|AFQR01000052.1 Genbank gene 4264 4698 . - . ID=gene-GGE_2224;Name=GGE_2224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2224 GCA_000222085.2|AFQR01000052.1 Genbank CDS 4264 4698 . - 0 ID=cds-EGT78466.1;Parent=gene-GGE_2224;Dbxref=GeneID:319897775,InterPro:IPR019636,PFAM:PF10695,NCBI_GP:EGT78466.1;Name=EGT78466.1;Note=YP_004135972;gbkey=CDS;locus_tag=GGE_2224;product=cell wall-associated hydrolase;protein_id=EGT78466.1;transl_table=11 GCA_000222085.2|AFQR01000052.1 Genbank sequence_feature 4264 4579 . - . ID=id-GGE_2224;Dbxref=InterPro:IPR019636,PFAM:PF10695;Note=superfamily~cw-hydrolase~cell wall-associated hydrolase%3B label: Cw-hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_2224 GCA_000222085.2|AFQR01000052.1 Genbank sequence_feature 4312 4639 . + . ID=id-AFQR01000052.1:4312..4639;Note=seg;gbkey=misc_feature ##sequence-region AFQR01000051.1 1 5097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000051.1 Genbank region 1 5097 . + . ID=AFQR01000051.1:1..5097;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 117 126 . - . ID=id-AFQR01000051.1:117..126;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank gene 236 628 . - . ID=gene-GGE_2214;Name=GGE_2214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2214 GCA_000222085.2|AFQR01000051.1 Genbank CDS 236 628 . - 0 ID=cds-EGT78484.1;Parent=gene-GGE_2214;Dbxref=GeneID:145641960,NCBI_GP:EGT78484.1;Name=EGT78484.1;Note=ZP_01797533~CGSHiR3021_02703;gbkey=CDS;locus_tag=GGE_2214;product=Hypothetical protein;protein_id=EGT78484.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank gene 621 1280 . - . ID=gene-GGE_2215;Name=GGE_2215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2215 GCA_000222085.2|AFQR01000051.1 Genbank CDS 621 1280 . - 0 ID=cds-EGT78485.1;Parent=gene-GGE_2215;Dbxref=GeneID:145641959,NCBI_GP:EGT78485.1;Name=EGT78485.1;Note=ZP_01797532~CGSHiR3021_02698;gbkey=CDS;locus_tag=GGE_2215;product=Hypothetical protein;protein_id=EGT78485.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank gene 1267 1488 . - . ID=gene-GGE_2216;Name=GGE_2216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2216 GCA_000222085.2|AFQR01000051.1 Genbank CDS 1267 1488 . - 0 ID=cds-EGT78486.1;Parent=gene-GGE_2216;Dbxref=GeneID:319776167,NCBI_GP:EGT78486.1;Name=EGT78486.1;Note=YP_004138655~HICON_15180;gbkey=CDS;locus_tag=GGE_2216;product=Hypothetical protein;protein_id=EGT78486.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank gene 1460 1831 . - . ID=gene-GGE_2217;Name=GGE_2217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2217 GCA_000222085.2|AFQR01000051.1 Genbank CDS 1460 1831 . - 0 ID=cds-EGT78487.1;Parent=gene-GGE_2217;Dbxref=GeneID:319896974,NCBI_GP:EGT78487.1;Name=EGT78487.1;Note=YP_004135169;gbkey=CDS;locus_tag=GGE_2217;product=Hypothetical protein;protein_id=EGT78487.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank gene 1824 2525 . - . ID=gene-GGE_2218;Name=GGE_2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2218 GCA_000222085.2|AFQR01000051.1 Genbank CDS 1824 2525 . - 0 ID=cds-EGT78488.1;Parent=gene-GGE_2218;Dbxref=InterPro:IPR018880,PFAM:PF10554,NCBI_GP:EGT78488.1;Name=EGT78488.1;Note=Hypothetical phage P4 Ash-like protein;gbkey=CDS;locus_tag=GGE_2218;product=putative phage P4 Ash-like protein;protein_id=EGT78488.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 1824 1965 . - . ID=id-GGE_2218;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=superfamily~phage_ash~phage p4%2C ash protein%3B label: Phage_ASH superfamily;gbkey=misc_feature;locus_tag=GGE_2218 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 1863 2469 . + . ID=id-AFQR01000051.1:1863..2469;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 1878 1887 . + . ID=id-AFQR01000051.1:1878..1887;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 2223 2232 . + . ID=id-AFQR01000051.1:2223..2232;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank gene 2543 3310 . - . ID=gene-GGE_2219;Name=GGE_2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2219 GCA_000222085.2|AFQR01000051.1 Genbank CDS 2543 3310 . - 0 ID=cds-EGT78489.1;Parent=gene-GGE_2219;Dbxref=InterPro:IPR018880,PFAM:PF10554,NCBI_GP:EGT78489.1;Name=EGT78489.1;Note=Hypothetical phage P4 Ash-like protein;gbkey=CDS;locus_tag=GGE_2219;product=putative phage P4 Ash-like protein;protein_id=EGT78489.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 2675 2816 . - . ID=id-GGE_2219;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=phage_ash~phage p4%2C ash protein;gbkey=misc_feature;locus_tag=GGE_2219 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 3212 3221 . - . ID=id-GGE_2219-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2219 GCA_000222085.2|AFQR01000051.1 Genbank gene 3462 4235 . - . ID=gene-GGE_2220;Name=GGE_2220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2220 GCA_000222085.2|AFQR01000051.1 Genbank CDS 3462 4235 . - 0 ID=cds-EGT78490.1;Parent=gene-GGE_2220;Dbxref=GeneID:319776170,InterPro:IPR013557,PFAM:PF08346,NCBI_GP:EGT78490.1;Name=EGT78490.1;Note=YP_004138658;gbkey=CDS;locus_tag=GGE_2220;product=putative anti-repressor protein;protein_id=EGT78490.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 3570 3708 . - . ID=id-GGE_2220;Dbxref=InterPro:IPR013557,PFAM:PF08346;Note=superfamily~anta~anta/antb antirepressor%3B label: AntA superfamily;gbkey=misc_feature;locus_tag=GGE_2220 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 3501 4119 . + . ID=id-AFQR01000051.1:3501..4119;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank gene 4225 4527 . - . ID=gene-GGE_2221;Name=GGE_2221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2221 GCA_000222085.2|AFQR01000051.1 Genbank CDS 4225 4527 . - 0 ID=cds-EGT78491.1;Parent=gene-GGE_2221;Dbxref=GeneID:319776171,NCBI_GP:EGT78491.1;Name=EGT78491.1;Note=YP_004138659~HICON_15220;gbkey=CDS;locus_tag=GGE_2221;product=Hypothetical protein;protein_id=EGT78491.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 4291 4360 . + . ID=id-AFQR01000051.1:4291..4360;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000051.1 Genbank gene 4527 4949 . - . ID=gene-GGE_2222;Name=GGE_2222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2222 GCA_000222085.2|AFQR01000051.1 Genbank CDS 4527 4949 . - 0 ID=cds-EGT78492.1;Parent=gene-GGE_2222;Dbxref=GeneID:319776172,InterPro:IPR005335,PFAM:PF03592,NCBI_GP:EGT78492.1;Name=EGT78492.1;Note=YP_004138660;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_2222;product=putative terminase small subunit;protein_id=EGT78492.1;transl_table=11 GCA_000222085.2|AFQR01000051.1 Genbank sequence_feature 4542 4785 . - . ID=id-GGE_2222;Dbxref=InterPro:IPR005335,PFAM:PF03592;Note=superfamily~terminase_2~terminase small subunit%3B label: Terminase_2 superfamily;gbkey=misc_feature;locus_tag=GGE_2222 ##sequence-region AFQR01000050.1 1 779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000050.1 Genbank region 1 779 . + . ID=AFQR01000050.1:1..779;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000050.1 Genbank sequence_feature 240 435 . + . ID=id-AFQR01000050.1:240..435;Note=HMMPanther:PTHR25952:SF102~subfamily not named~HMMPanther:PTHR25952~family not named;gbkey=misc_feature ##sequence-region AFQR01000049.1 1 3556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000049.1 Genbank region 1 3556 . + . ID=AFQR01000049.1:1..3556;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000049.1 Genbank gene 303 2795 . + . ID=gene-GGE_2211;Name=GGE_2211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2211 GCA_000222085.2|AFQR01000049.1 Genbank CDS 303 2795 . + 0 ID=cds-EGT78616.1;Parent=gene-GGE_2211;Dbxref=InterPro:IPR018880,PFAM:PF10554,NCBI_GP:EGT78616.1;Name=EGT78616.1;Note=Hypothetical phage P4 Ash-like protein;gbkey=CDS;locus_tag=GGE_2211;product=putative phage P4 Ash-like protein;protein_id=EGT78616.1;transl_table=11 GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 390 399 . + . ID=id-GGE_2211;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2211 GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 342 2739 . - . ID=id-AFQR01000049.1:342..2739;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 591 1431 . - . ID=id-AFQR01000049.1:591..1431;Note=superfamily%3B label: Phage_ASH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 600 1917 . - . ID=id-AFQR01000049.1:600..1917;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=superfamily~phage_ash~phage p4%2C ash protein%3B label: Phage_ASH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 609 927 . - . ID=id-AFQR01000049.1:609..927;Note=superfamily%3B label: Phage_ASH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 657 1431 . - . ID=id-AFQR01000049.1:657..1431;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=phage_ash~phage p4%2C ash protein;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 663 942 . - . ID=id-AFQR01000049.1:663..942;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=phage_ash~phage p4%2C ash protein;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 2361 2370 . - . ID=id-AFQR01000049.1:2361..2370;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank sequence_feature 2730 2739 . - . ID=id-AFQR01000049.1:2730..2739;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000049.1 Genbank gene 2788 3159 . + . ID=gene-GGE_2212;Name=GGE_2212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2212 GCA_000222085.2|AFQR01000049.1 Genbank CDS 2788 3159 . + 0 ID=cds-EGT78617.1;Parent=gene-GGE_2212;Dbxref=GeneID:319896974,NCBI_GP:EGT78617.1;Name=EGT78617.1;Note=YP_004135169;gbkey=CDS;locus_tag=GGE_2212;product=Hypothetical protein;protein_id=EGT78617.1;transl_table=11 GCA_000222085.2|AFQR01000049.1 Genbank gene 3131 3352 . + . ID=gene-GGE_2213;Name=GGE_2213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2213 GCA_000222085.2|AFQR01000049.1 Genbank CDS 3131 3352 . + 0 ID=cds-EGT78618.1;Parent=gene-GGE_2213;Dbxref=GeneID:145641958,NCBI_GP:EGT78618.1;Name=EGT78618.1;Note=ZP_01797531~CGSHiR3021_02693;gbkey=CDS;locus_tag=GGE_2213;product=Hypothetical protein;protein_id=EGT78618.1;transl_table=11 ##sequence-region AFQR01000048.1 1 2740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000048.1 Genbank region 1 2740 . + . ID=AFQR01000048.1:1..2740;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000048.1 Genbank gene 655 954 . + . ID=gene-GGE_2206;Name=GGE_2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2206 GCA_000222085.2|AFQR01000048.1 Genbank CDS 655 954 . + 0 ID=cds-EGT78650.1;Parent=gene-GGE_2206;Dbxref=GeneID:1175792,InterPro:IPR009241,InterPro:IPR014056,PFAM:PF05973,PIR:PIRSF028744,TIGRFAM:TIGR02683,NCBI_GP:EGT78650.1;Name=EGT78650.1;Note=HI_1419;gbkey=CDS;locus_tag=GGE_2206;product=Hypothetical protein;protein_id=EGT78650.1;transl_table=11 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 655 952 . + . ID=id-GGE_2206;Dbxref=InterPro:IPR014056,PIR:PIRSF028744;Note=uncharacterised conserved protein%2C gp-49 type~addiction module killer protein%2C hi1419;gbkey=misc_feature;locus_tag=GGE_2206 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 664 940 . + . ID=id-GGE_2206-2;Dbxref=InterPro:IPR014056,TIGRFAM:TIGR02683;Note=superfamily~upstrm_hi1419: probable addiction modul~addiction module killer protein%2C hi1419%3B label: Gp49 superfamily;gbkey=misc_feature;locus_tag=GGE_2206 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 697 889 . + . ID=id-GGE_2206-3;Dbxref=InterPro:IPR009241,PFAM:PF05973;Note=gp49~protein of unknown function duf891;gbkey=misc_feature;locus_tag=GGE_2206 GCA_000222085.2|AFQR01000048.1 Genbank gene 951 1244 . + . ID=gene-GGE_2207;Name=GGE_2207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2207 GCA_000222085.2|AFQR01000048.1 Genbank CDS 951 1244 . + 0 ID=cds-EGT78651.1;Parent=gene-GGE_2207;Dbxref=GeneID:1175793,InterPro:IPR001387,InterPro:IPR014057,PFAM:PF01381,TIGRFAM:TIGR02684,NCBI_GP:EGT78651.1;Name=EGT78651.1;Note=HI_1420;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||;locus_tag=GGE_2207;product=putative helix-turn-helix type 3;protein_id=EGT78651.1;transl_table=11 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 951 1242 . + . ID=id-GGE_2207;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_2207 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 963 1218 . + . ID=id-GGE_2207-2;Dbxref=InterPro:IPR014057,TIGRFAM:TIGR02684;Note=dnstrm_hi1420: probable addiction modul~addiction module antidote protein%2C hi1420;gbkey=misc_feature;locus_tag=GGE_2207 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1083 1086 . + . ID=id-GGE_2207-3;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_2207 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1083 1089 . - . ID=id-AFQR01000048.1:1083..1089;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000048.1 Genbank gene 1276 1644 . - . ID=gene-GGE_2208;Name=GGE_2208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2208 GCA_000222085.2|AFQR01000048.1 Genbank CDS 1276 1644 . - 0 ID=cds-EGT78652.1;Parent=gene-GGE_2208;Dbxref=GeneID:148826898,InterPro:IPR010534,PFAM:PF06530,NCBI_GP:EGT78652.1;Name=EGT78652.1;Note=YP_001291651;Ontology_term=GO:0045449,GO:0003677,GO:0030401;gbkey=CDS;go_function=DNA binding|0003677||,transcription antiterminator activity|0030401||;go_process=regulation of transcription|0045449||;locus_tag=GGE_2208;product=putative phage antitermination Q-like protein;protein_id=EGT78652.1;transl_table=11 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1291 1594 . - . ID=id-GGE_2208;Dbxref=InterPro:IPR010534,PFAM:PF06530;Note=phage_antitermq~phage antitermination q-like;gbkey=misc_feature;locus_tag=GGE_2208 GCA_000222085.2|AFQR01000048.1 Genbank gene 1646 2194 . - . ID=gene-GGE_2209;Name=GGE_2209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2209 GCA_000222085.2|AFQR01000048.1 Genbank CDS 1646 2194 . - 0 ID=cds-EGT78653.1;Parent=gene-GGE_2209;Dbxref=GeneID:145632831,InterPro:IPR008713,PFAM:PF05766,NCBI_GP:EGT78653.1;Name=EGT78653.1;Note=ZP_01788564;gbkey=CDS;locus_tag=GGE_2209;product=NinG recombination protein;protein_id=EGT78653.1;transl_table=11 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1652 2189 . - . ID=id-GGE_2209;Note=superfamily%3B label: NinG superfamily;gbkey=misc_feature;locus_tag=GGE_2209 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1652 2183 . - . ID=id-GGE_2209-2;Dbxref=InterPro:IPR008713,PFAM:PF05766;Note=ning~bacteriophage lambda ning;gbkey=misc_feature;locus_tag=GGE_2209 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1682 2144 . + . ID=id-AFQR01000048.1:1682..2144;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1700 1763 . + . ID=id-AFQR01000048.1:1700..1763;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1712 2132 . + . ID=id-AFQR01000048.1:1712..2132;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 1739 1739 . + . ID=id-AFQR01000048.1:1739..1739;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000048.1 Genbank gene 2350 2535 . + . ID=gene-GGE_2210;Name=GGE_2210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2210 GCA_000222085.2|AFQR01000048.1 Genbank CDS 2350 2535 . + 0 ID=cds-EGT78654.1;Parent=gene-GGE_2210;Dbxref=GeneID:68249865,InterPro:IPR012933,InterPro:IPR015146,PFAM:PF07927,NCBI_GP:EGT78654.1;Name=EGT78654.1;Note=YP_248977;gbkey=CDS;locus_tag=GGE_2210;product=putative ribonucleotide reductase%2C stirrup;protein_id=EGT78654.1;transl_table=11 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 2350 2530 . + . ID=id-GGE_2210;Dbxref=InterPro:IPR015146;Note=Gene3D:3.30.920.30~superfamily:SSF54786~ycfa/nrd intein domain~ribonucleotide reductase%2C stirrup;gbkey=misc_feature;locus_tag=GGE_2210 GCA_000222085.2|AFQR01000048.1 Genbank sequence_feature 2359 2524 . + . ID=id-GGE_2210-2;Dbxref=InterPro:IPR012933,PFAM:PF07927;Note=superfamily~ycfa~uncharacterised protein family upf0395%3B label: YcfA superfamily;gbkey=misc_feature;locus_tag=GGE_2210 ##sequence-region AFQR01000047.1 1 2634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000047.1 Genbank region 1 2634 . + . ID=AFQR01000047.1:1..2634;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000047.1 Genbank gene 1347 2282 . + . ID=gene-GGE_2205;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank CDS 1347 2282 . + 0 ID=cds-EGT78655.1;Parent=gene-GGE_2205;Dbxref=GeneID:1168987,InterPro:IPR004566,InterPro:IPR006083,PFAM:PF00485,PIR:PIRSF000545,TIGRFAM:TIGR00554,NCBI_GP:EGT78655.1;Name=EGT78655.1;Ontology_term=GO:0015937,GO:0008152,GO:0005737,GO:0005524,GO:0016301,GO:0004594;gbkey=CDS;gene=coaA;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,kinase activity|0016301||,pantothenate kinase activity|0004594||;go_process=coenzyme A biosynthetic process|0015937||,metabolic process|0008152||;locus_tag=GGE_2205;product=Pantothenate kinase;protein_id=EGT78655.1;transl_table=11 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1347 2280 . + . ID=id-GGE_2205;Dbxref=InterPro:IPR004566,PIR:PIRSF000545;Note=pantothenate kinase%2C bacterial type~bacterial pantothenate kinase~HAMAP:MF_00215~pantothen_kinase_1~bacterial pantothenate kinase;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1359 2271 . + . ID=id-GGE_2205-2;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: PRK05439;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1368 2214 . + . ID=id-GGE_2205-3;Dbxref=InterPro:IPR004566;Note=HMMPanther:PTHR10285:SF7~pantothenate kinase~bacterial pantothenate kinase~HMMPanther:PTHR10285~uridine kinase;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1371 2259 . + . ID=id-GGE_2205-4;Dbxref=InterPro:IPR004566,TIGRFAM:TIGR00554;Note=Gene3D:3.40.50.300~pank_bact: pantothenate kinase~bacterial pantothenate kinase;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1611 2013 . + . ID=id-GGE_2205-5;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1611 1803 . + . ID=id-GGE_2205-6;Dbxref=InterPro:IPR006083,PFAM:PF00485;Note=prk~phosphoribulokinase/uridine kinase;gbkey=misc_feature;gene=coaA;locus_tag=GGE_2205 GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 1386 1740 . - . ID=id-AFQR01000047.1:1386..1740;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000047.1 Genbank sequence_feature 2286 2295 . + . ID=id-AFQR01000047.1:2286..2295;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000046.1 1 9146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000046.1 Genbank region 1 9146 . + . ID=AFQR01000046.1:1..9146;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000046.1 Genbank gene 679 1977 . + . ID=gene-GGE_2196;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank CDS 679 1977 . + 0 ID=cds-EGT78706.1;Parent=gene-GGE_2196;Dbxref=GeneID:81336286,InterPro:IPR001179,InterPro:IPR005215,InterPro:IPR008880,InterPro:IPR008881,PFAM:PF00254,PFAM:PF05697,PFAM:PF05698,PIR:PIRSF003095,TIGRFAM:TIGR00115,NCBI_GP:EGT78706.1;Name=EGT78706.1;Ontology_term=GO:0006457,GO:0015031;gbkey=CDS;gene=tig;go_process=protein folding|0006457||,protein transport|0015031||;locus_tag=GGE_2196;product=Trigger factor;protein_id=EGT78706.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1975 . + . ID=id-GGE_2196;Dbxref=InterPro:IPR005215,PIR:PIRSF003095;Note=fkbp-type peptidyl-prolyl cis-trans isomerase (trigger factor)~trigger factor;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1966 . + . ID=id-GGE_2196-2;Note=multi-dom%3B label: tig;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1933 . + . ID=id-GGE_2196-3;Dbxref=InterPro:IPR005215;Note=HAMAP:MF_00303~trigger_factor_tig~trigger factor;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1114 . + . ID=id-GGE_2196-4;Dbxref=InterPro:IPR008881,PFAM:PF05697;Note=trigger_n~trigger factor%2C ribosome-binding%2C bacterial;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1066 . + . ID=id-GGE_2196-5;Dbxref=InterPro:IPR008881;Note=superfamily:SSF102735~trigger factor ribosome-binding domain~trigger factor%2C ribosome-binding%2C bacterial;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 679 1033 . + . ID=id-GGE_2196-6;Dbxref=InterPro:IPR008881;Note=Gene3D:3.30.70.1050~trigger factor%2C ribosome-binding%2C bacterial;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 712 1885 . + . ID=id-GGE_2196-7;Dbxref=InterPro:IPR005215,TIGRFAM:TIGR00115;Note=tig: trigger factor~trigger factor;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 940 1150 . + . ID=id-GGE_2196-8;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature;gene=tig;locus_tag=GGE_2196 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 871 1141 . - . ID=id-AFQR01000046.1:871..1141;Note=Gene3D:3.10.50.40;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 928 1144 . - . ID=id-AFQR01000046.1:928..1144;Dbxref=InterPro:IPR001179,PFAM:PF00254;Note=fkbp_c~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 931 1144 . - . ID=id-AFQR01000046.1:931..1144;Note=superfamily%3B label: FKBP_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 937 1162 . - . ID=id-AFQR01000046.1:937..1162;Dbxref=InterPro:IPR001179;Note=ProfileScan:PS50059~fkbp_ppiase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 1132 1465 . - . ID=id-AFQR01000046.1:1132..1465;Dbxref=InterPro:IPR008880,PFAM:PF05698;Note=trigger_c~trigger factor%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 1135 1465 . - . ID=id-AFQR01000046.1:1135..1465;Note=superfamily%3B label: Trigger_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 1192 1333 . - . ID=id-AFQR01000046.1:1192..1333;Dbxref=InterPro:IPR008880;Note=Gene3D:1.10.3120.10~trigger factor%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 1234 1423 . - . ID=id-AFQR01000046.1:1234..1423;Dbxref=InterPro:IPR008880;Note=superfamily:SSF109998~triger factor/sura peptide-binding domain-like~trigger factor%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2006 2015 . + . ID=id-AFQR01000046.1:2006..2015;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 2104 2685 . + . ID=gene-GGE_2197;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank CDS 2104 2685 . + 0 ID=cds-EGT78707.1;Parent=gene-GGE_2197;Dbxref=GeneID:166201827,InterPro:IPR001907,InterPro:IPR018215,InterPro:IPR023562,PFAM:PF00574,TIGRFAM:TIGR00493,NCBI_GP:EGT78707.1;Name=EGT78707.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=clpP;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_2197;product=ATP-dependent Clp protease proteolytic subunit;protein_id=EGT78707.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2104 2680 . + . ID=id-GGE_2197;Dbxref=InterPro:IPR001907,TIGRFAM:TIGR00493;Note=clpp: atp-dependent clp protease%2C proteolyti~peptidase s14%2C clpp;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2104 2674 . + . ID=id-GGE_2197-2;Dbxref=InterPro:IPR023562;Note=HMMPanther:PTHR10381~atp-dependent clp protease proteolytic subunit~peptidase s14/s49;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2113 2677 . + . ID=id-GGE_2197-3;Dbxref=InterPro:IPR001907;Note=HAMAP:MF_00444~clpp~peptidase s14%2C clpp;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2113 2668 . + . ID=id-GGE_2197-4;Note=Gene3D:3.90.226.10;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2134 2647 . + . ID=id-GGE_2197-5;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2140 2644 . + . ID=id-GGE_2197-6;Dbxref=InterPro:IPR001907,PFAM:PF00574;Note=clp_protease~peptidase s14%2C clpp;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2161 2617 . + . ID=id-GGE_2197-7;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature;gene=clpP;locus_tag=GGE_2197 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2140 2374 . - . ID=id-AFQR01000046.1:2140..2374;Dbxref=InterPro:IPR018215;Note=PatternScan:PS00381~clp_protease_ser~peptidase s14%2C clpp%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2146 2440 . - . ID=id-AFQR01000046.1:2146..2440;Dbxref=InterPro:IPR018215;Note=PatternScan:PS00382~clp_protease_his~peptidase s14%2C clpp%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2152 2161 . - . ID=id-AFQR01000046.1:2152..2161;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2158 2374 . - . ID=id-AFQR01000046.1:2158..2374;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2164 2608 . - . ID=id-AFQR01000046.1:2164..2608;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2164 2437 . - . ID=id-AFQR01000046.1:2164..2437;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2167 2281 . - . ID=id-AFQR01000046.1:2167..2281;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 2694 3935 . + . ID=gene-GGE_2198;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank CDS 2694 3935 . + 0 ID=cds-EGT78708.1;Parent=gene-GGE_2198;Dbxref=GeneID:1168980,InterPro:IPR004487,InterPro:IPR010603,InterPro:IPR013093,InterPro:IPR019489,PFAM:PF06689,PFAM:PF07724,PFAM:PF10431,TIGRFAM:TIGR00382,NCBI_GP:EGT78708.1;Name=EGT78708.1;Ontology_term=GO:0006457,GO:0019538,GO:0005524,GO:0016887,GO:0046983,GO:0051082,GO:0008270;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||,ATPase activity|0016887||,protein dimerization activity|0046983||,unfolded protein binding|0051082||,zinc ion binding|0008270||;go_process=protein folding|0006457||,protein metabolic process|0019538||;locus_tag=GGE_2198;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=EGT78708.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2694 3933 . + . ID=id-GGE_2198;Note=multi-dom%3B label: clpX;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2694 3924 . + . ID=id-GGE_2198-2;Dbxref=InterPro:IPR004487,TIGRFAM:TIGR00382;Note=clpx: atp-dependent clp protease%2C atp-bindin~clp protease%2C atp-binding subunit clpx;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2694 3897 . + . ID=id-GGE_2198-3;Note=HMMPanther:PTHR11262~family not named;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2700 3930 . + . ID=id-GGE_2198-4;Dbxref=InterPro:IPR004487;Note=HAMAP:MF_00175~clpx~clp protease%2C atp-binding subunit clpx;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2715 2808 . + . ID=id-GGE_2198-5;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2718 2808 . + . ID=id-GGE_2198-6;Dbxref=InterPro:IPR010603,PFAM:PF06689;Note=superfamily~zf-c4_clpx~zinc finger%2C c4-type%3B label: zf-C4_ClpX superfamily;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2868 3717 . + . ID=id-GGE_2198-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 3024 3294 . + . ID=id-GGE_2198-8;Dbxref=InterPro:IPR013093,PFAM:PF07724;Note=aaa_2~atpase%2C aaa-2;gbkey=misc_feature;gene=clpX;locus_tag=GGE_2198 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2736 3747 . - . ID=id-AFQR01000046.1:2736..3747;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2736 3507 . - . ID=id-AFQR01000046.1:2736..3507;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2769 3579 . - . ID=id-AFQR01000046.1:2769..3579;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2859 2922 . - . ID=id-AFQR01000046.1:2859..2922;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2928 3639 . - . ID=id-AFQR01000046.1:2928..3639;Dbxref=InterPro:IPR019489,PFAM:PF10431;Note=clpb_d2-small~clp atpase;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2943 3639 . - . ID=id-AFQR01000046.1:2943..3639;Note=superfamily%3B label: ClpB_D2-small superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2949 3024 . - . ID=id-AFQR01000046.1:2949..3024;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 2970 3654 . - . ID=id-AFQR01000046.1:2970..3654;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 3939 3948 . + . ID=id-AFQR01000046.1:3939..3948;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 4075 4491 . + . ID=gene-GGE_2199;Name=GGE_2199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2199 GCA_000222085.2|AFQR01000046.1 Genbank CDS 4075 4491 . + 0 ID=cds-EGT78709.1;Parent=gene-GGE_2199;Dbxref=GeneID:309973787,InterPro:IPR001901,InterPro:IPR005807,PFAM:PF00584,TIGRFAM:TIGR00964,NCBI_GP:EGT78709.1;Name=EGT78709.1;Note=ADO96988;Ontology_term=GO:0006886,GO:0009306,GO:0006605,GO:0016021,GO:0016020,GO:0015450;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=P-P-bond-hydrolysis-driven protein transmembrane transporter activity|0015450||;go_process=intracellular protein transport|0006886||,protein secretion|0009306||,protein targeting|0006605||;locus_tag=GGE_2199;product=Putative preprotein translocase SecE subunit;protein_id=EGT78709.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4102 4171 . - . ID=id-AFQR01000046.1:4102..4171;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4126 4435 . - . ID=id-AFQR01000046.1:4126..4435;Dbxref=InterPro:IPR005807;Note=FPrintScan:PR01650~secetrnlcase~sece subunit of protein translocation complex;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4132 4237 . - . ID=id-AFQR01000046.1:4132..4237;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4138 4375 . - . ID=id-AFQR01000046.1:4138..4375;Dbxref=InterPro:IPR005807;Note=FPrintScan:PR01650~secetrnlcase~sece subunit of protein translocation complex;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4138 4303 . - . ID=id-AFQR01000046.1:4138..4303;Dbxref=InterPro:IPR005807;Note=FPrintScan:PR01650~secetrnlcase~sece subunit of protein translocation complex;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4141 4240 . - . ID=id-AFQR01000046.1:4141..4240;Dbxref=InterPro:IPR005807;Note=FPrintScan:PR01650~secetrnlcase~sece subunit of protein translocation complex;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4144 4396 . - . ID=id-AFQR01000046.1:4144..4396;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4144 4228 . - . ID=id-AFQR01000046.1:4144..4228;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4144 4147 . - . ID=id-AFQR01000046.1:4144..4147;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4162 4321 . - . ID=id-AFQR01000046.1:4162..4321;Dbxref=InterPro:IPR001901;Note=PatternScan:PS01067~sece_sec61g~protein translocase complex%2C sece/sec61-gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4243 4309 . - . ID=id-AFQR01000046.1:4243..4309;Dbxref=InterPro:IPR001901,PFAM:PF00584;Note=sece~protein translocase complex%2C sece/sec61-gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4246 4312 . - . ID=id-AFQR01000046.1:4246..4312;Dbxref=InterPro:IPR005807,TIGRFAM:TIGR00964;Note=sece_bact: preprotein translocase%2C sece sub~sece subunit of protein translocation complex;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4264 4294 . - . ID=id-AFQR01000046.1:4264..4294;Note=superfamily%3B label: SecE superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 4493 5050 . + . ID=gene-GGE_2200;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank CDS 4493 5050 . + 0 ID=cds-EGT78710.1;Parent=gene-GGE_2200;Dbxref=GeneID:1171875,InterPro:IPR001062,InterPro:IPR005824,InterPro:IPR006645,InterPro:IPR008991,InterPro:IPR014722,InterPro:IPR015869,PFAM:PF00467,PFAM:PF02357,TIGRFAM:TIGR00922,NCBI_GP:EGT78710.1;Name=EGT78710.1;Ontology_term=GO:0032968,GO:0006355,GO:0003711;gbkey=CDS;gene=nusG;go_function=transcription elongation regulator activity|0003711||;go_process=positive regulation of transcription elongation from RNA polymerase II promoter|0032968||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_2200;product=Transcription antitermination protein nusG;protein_id=EGT78710.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4517 5024 . + . ID=id-GGE_2200;Note=multi-dom%3B label: nusG;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4520 4835 . + . ID=id-GGE_2200-2;Dbxref=InterPro:IPR006645;Note=superfamily:SSF82679~n-utilization substance g protein nusg domain~transcription antitermination protein%2C nusg;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4520 4829 . + . ID=id-GGE_2200-3;Dbxref=InterPro:IPR006645;Note=Gene3D:3.30.70.940~transcription antitermination protein%2C nusg;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4523 4790 . + . ID=id-GGE_2200-4;Dbxref=InterPro:IPR006645,PFAM:PF02357;Note=nusg~transcription antitermination protein%2C nusg;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4526 4814 . + . ID=id-GGE_2200-5;Note=superfamily%3B label: NusG superfamily;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4529 5012 . + . ID=id-GGE_2200-6;Dbxref=InterPro:IPR001062,TIGRFAM:TIGR00922;Note=nusg: transcription termination/antiterminat~transcription antitermination protein%2C nusg;gbkey=misc_feature;gene=nusG;locus_tag=GGE_2200 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4523 4994 . - . ID=id-AFQR01000046.1:4523..4994;Dbxref=InterPro:IPR015869;Note=PatternScan:PS01014~nusg~transcription antitermination protein%2C nusg%2C bacteria%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4532 4685 . - . ID=id-AFQR01000046.1:4532..4685;Dbxref=InterPro:IPR001062;Note=FPrintScan:PR00338~nusgtnscpfct~transcription antitermination protein%2C nusg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4541 4919 . - . ID=id-AFQR01000046.1:4541..4919;Dbxref=InterPro:IPR001062;Note=FPrintScan:PR00338~nusgtnscpfct~transcription antitermination protein%2C nusg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4544 4973 . - . ID=id-AFQR01000046.1:4544..4973;Dbxref=InterPro:IPR001062;Note=FPrintScan:PR00338~nusgtnscpfct~transcription antitermination protein%2C nusg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4586 4892 . - . ID=id-AFQR01000046.1:4586..4892;Dbxref=InterPro:IPR005824,PFAM:PF00467;Note=superfamily~kow~kow%3B label: KOW superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4667 4874 . - . ID=id-AFQR01000046.1:4667..4874;Dbxref=InterPro:IPR008991;Note=superfamily:SSF50104~translation proteins sh3-like domain~translation protein sh3-like;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 4679 4862 . - . ID=id-AFQR01000046.1:4679..4862;Dbxref=InterPro:IPR014722;Note=Gene3D:2.30.30.30~translation protein sh3-like%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5077 5086 . - . ID=id-AFQR01000046.1:5077..5086;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5225 5234 . + . ID=id-AFQR01000046.1:5225..5234;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 5241 6062 . - . ID=gene-GGE_2201;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank CDS 5241 6062 . - 0 ID=cds-EGT78711.1;Parent=gene-GGE_2201;Dbxref=GeneID:1171732,InterPro:IPR004478,InterPro:IPR004872,PFAM:PF03180,TIGRFAM:TIGR00363,NCBI_GP:EGT78711.1;Name=EGT78711.1;gbkey=CDS;gene=metQ;locus_tag=GGE_2201;product=Putative D-methionine-binding lipoprotein metQ;protein_id=EGT78711.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5241 5304 . - . ID=id-GGE_2201;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=metQ;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5277 6027 . - . ID=id-GGE_2201-2;Dbxref=InterPro:IPR004478,TIGRFAM:TIGR00363;Note=superfamily~tigr00363: lipoprotein%2C yaec family~lipoprotein yaec%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=metQ;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5346 5958 . - . ID=id-GGE_2201-3;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=metQ;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5346 5628 . - . ID=id-GGE_2201-4;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=metQ;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5349 5955 . - . ID=id-GGE_2201-5;Dbxref=InterPro:IPR004872,PFAM:PF03180;Note=lipoprotein_9~nlpa lipoprotein;gbkey=misc_feature;gene=metQ;locus_tag=GGE_2201 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5277 5385 . + . ID=id-AFQR01000046.1:5277..5385;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5280 5691 . + . ID=id-AFQR01000046.1:5280..5691;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5283 5811 . + . ID=id-AFQR01000046.1:5283..5811;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5283 5307 . + . ID=id-AFQR01000046.1:5283..5307;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 5953 6001 . + . ID=id-AFQR01000046.1:5953..6001;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 6101 6790 . - . ID=gene-GGE_2202;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=GGE_2202 GCA_000222085.2|AFQR01000046.1 Genbank CDS 6101 6790 . - 0 ID=cds-EGT78712.1;Parent=gene-GGE_2202;Dbxref=GeneID:23503076,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT78712.1;Name=EGT78712.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=metI;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2202;product=Putative D-methionine transport system permease protein metI;protein_id=EGT78712.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6155 6725 . - . ID=id-GGE_2202;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=metI;locus_tag=GGE_2202 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6176 6683 . - . ID=id-GGE_2202-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=metI;locus_tag=GGE_2202 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6263 6623 . - . ID=id-GGE_2202-3;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=metI;locus_tag=GGE_2202 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6284 6431 . - . ID=id-GGE_2202-4;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=metI;locus_tag=GGE_2202 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6125 6344 . + . ID=id-AFQR01000046.1:6125..6344;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6128 6221 . + . ID=id-AFQR01000046.1:6128..6221;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6167 6614 . + . ID=id-AFQR01000046.1:6167..6614;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6170 6674 . + . ID=id-AFQR01000046.1:6170..6674;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6170 6563 . + . ID=id-AFQR01000046.1:6170..6563;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6170 6380 . + . ID=id-AFQR01000046.1:6170..6380;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6170 6299 . + . ID=id-AFQR01000046.1:6170..6299;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6170 6194 . + . ID=id-AFQR01000046.1:6170..6194;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 6780 7817 . - . ID=gene-GGE_2203;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank CDS 6780 7817 . - 0 ID=cds-EGT78713.1;Parent=gene-GGE_2203;Dbxref=GeneID:81336254,InterPro:IPR003439,InterPro:IPR012692,InterPro:IPR017871,InterPro:IPR017908,InterPro:IPR018449,PFAM:PF00005,PFAM:PF09383,TIGRFAM:TIGR02314,NCBI_GP:EGT78713.1;Name=EGT78713.1;Ontology_term=GO:0048473,GO:0015821,GO:0009276,GO:0005524,GO:0016887,GO:0048474,GO:0015424;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||;go_function=ATP binding|0005524||,ATPase activity|0016887||,D-methionine transmembrane transporter activity|0048474||,amino acid-transporting ATPase activity|0015424||;go_process=D-methionine transport|0048473||,methionine transport|0015821||;locus_tag=GGE_2203;product=Methionine import ATP-binding protein MetN;protein_id=EGT78713.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6780 7812 . - . ID=id-GGE_2203;Dbxref=InterPro:IPR012692,TIGRFAM:TIGR02314;Note=multi-dom~abc_metn: d-methionine abc transporter%2C atp-~abc transporter%2C methionine import%2C atp-binding protein%2C metn%3B label: metN;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6780 7503 . - . ID=id-GGE_2203-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase~Gene3D:3.40.50.300;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6780 7479 . - . ID=id-GGE_2203-3;Note=specific~superfamily%3B label: ABC_MetN_methionine_transporter;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6786 7560 . - . ID=id-GGE_2203-4;Note=HMMPanther:PTHR24220:SF34~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6786 7500 . - . ID=id-GGE_2203-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6915 7155 . - . ID=id-GGE_2203-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=metN;locus_tag=GGE_2203 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 6825 7203 . + . ID=id-AFQR01000046.1:6825..7203;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7002 7584 . + . ID=id-AFQR01000046.1:7002..7584;Dbxref=InterPro:IPR018449,PFAM:PF09383;Note=nil~nil domain;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7008 7578 . + . ID=id-AFQR01000046.1:7008..7578;Note=superfamily%3B label: NIL superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7077 7518 . + . ID=id-AFQR01000046.1:7077..7518;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7113 7482 . + . ID=id-AFQR01000046.1:7113..7482;Dbxref=InterPro:IPR017908;Note=ProfileScan:PS51264~metn~abc transporter%2C methionine import%2C atp-binding protein%2C metn;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7248 7257 . + . ID=id-AFQR01000046.1:7248..7257;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7444 7453 . + . ID=id-AFQR01000046.1:7444..7453;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000046.1 Genbank gene 7978 8547 . + . ID=gene-GGE_2204;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank CDS 7978 8547 . + 0 ID=cds-EGT78714.1;Parent=gene-GGE_2204;Dbxref=GeneID:1175503,InterPro:IPR004446,InterPro:IPR005834,InterPro:IPR006543,InterPro:IPR006549,InterPro:IPR023214,PFAM:PF00702,TIGRFAM:TIGR00213,TIGRFAM:TIGR01656,TIGRFAM:TIGR01662,NCBI_GP:EGT78714.1;Name=EGT78714.1;Ontology_term=GO:0005975,GO:0008152,GO:0003824,GO:0016791;gbkey=CDS;gene=gmhB;go_function=catalytic activity|0003824||,phosphatase activity|0016791||;go_process=carbohydrate metabolic process|0005975||,metabolic process|0008152||;locus_tag=GGE_2204;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=EGT78714.1;transl_table=11 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7978 8515 . + . ID=id-GGE_2204;Note=HMMPanther:PTHR23133:SF3~his7-related~HMMPanther:PTHR23133~family not named;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7990 8521 . + . ID=id-GGE_2204-2;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7996 8473 . + . ID=id-GGE_2204-3;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 7999 8506 . + . ID=id-GGE_2204-4;Dbxref=InterPro:IPR004446,TIGRFAM:TIGR00213;Note=gmhb_yaed: d%2Cd-heptose 1%2C7-bisphospha~d%2Cd-heptose 1%2C7-bisphosphate phosphatase;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 8002 8434 . + . ID=id-GGE_2204-5;Dbxref=InterPro:IPR006543,InterPro:IPR006549,TIGRFAM:TIGR01656,TIGRFAM:TIGR01662;Note=histidinol-ppas: histidinol-phosphate~histidinol-phosphate phosphatase~had-sf-iiia: had hydrolase%2C family ii~had-superfamily hydrolase%2C subfamily iiia;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 8005 8398 . + . ID=id-GGE_2204-6;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 8080 8314 . + . ID=id-GGE_2204-7;Dbxref=InterPro:IPR005834,PFAM:PF00702;Note=hydrolase~haloacid dehalogenase-like hydrolase;gbkey=misc_feature;gene=gmhB;locus_tag=GGE_2204 GCA_000222085.2|AFQR01000046.1 Genbank sequence_feature 8209 8314 . - . ID=id-AFQR01000046.1:8209..8314;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature ##sequence-region AFQR01000045.1 1 7458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000045.1 Genbank region 1 7458 . + . ID=AFQR01000045.1:1..7458;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 466 475 . - . ID=id-AFQR01000045.1:466..475;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank gene 505 1527 . - . ID=gene-GGE_2192;Name=GGE_2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2192 GCA_000222085.2|AFQR01000045.1 Genbank CDS 505 1527 . - 0 ID=cds-EGT78750.1;Parent=gene-GGE_2192;Dbxref=GeneID:229847242,InterPro:IPR006127,PFAM:PF01297,NCBI_GP:EGT78750.1;Name=EGT78750.1;Note=ZP_04467345;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||;go_process=metal ion transport|0030001||;locus_tag=GGE_2192;product=high-affinity zinc transporter periplasmic component;protein_id=EGT78750.1;transl_table=11 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 511 553 . - . ID=id-GGE_2192;Note=seg;gbkey=misc_feature;locus_tag=GGE_2192 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 538 1489 . - . ID=id-GGE_2192-2;Dbxref=InterPro:IPR006127,PFAM:PF01297;Note=sbp_bac_9~abc transporter%2C metal-binding lipoprotein;gbkey=misc_feature;locus_tag=GGE_2192 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 565 1462 . - . ID=id-GGE_2192-3;Note=specific~superfamily%3B label: TroA-like superfamily;gbkey=misc_feature;locus_tag=GGE_2192 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 568 1465 . - . ID=id-GGE_2192-4;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature;locus_tag=GGE_2192 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 664 850 . + . ID=id-AFQR01000045.1:664..850;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 727 955 . + . ID=id-AFQR01000045.1:727..955;Note=Gene3D:3.40.50.1980;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 850 1177 . + . ID=id-AFQR01000045.1:850..1177;Note=Gene3D:3.40.50.1980;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 883 892 . + . ID=id-AFQR01000045.1:883..892;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank gene 1705 2475 . - . ID=gene-GGE_2193;Name=GGE_2193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank CDS 1705 2475 . - 0 ID=cds-EGT78751.1;Parent=gene-GGE_2193;Dbxref=GeneID:2495207,InterPro:IPR000594,InterPro:IPR009036,InterPro:IPR016040,PFAM:PF00899,NCBI_GP:EGT78751.1;Name=EGT78751.1;Note=HI_0118;Ontology_term=GO:0008152,GO:0005488,GO:0003824;gbkey=CDS;go_function=binding|0005488||,catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_2193;product=putative uBA/THIF-type NAD/FAD binding fold-containing protein;protein_id=EGT78751.1;transl_table=11 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1720 2455 . - . ID=id-GGE_2193;Note=multi-dom%3B label: PRK15116;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1729 2452 . - . ID=id-GGE_2193-2;Dbxref=InterPro:IPR009036;Note=superfamily:SSF69572~activating enzyme of the ubiquitin-like proteins~molybdenum cofactor biosynthesis%2C moeb;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1756 2416 . - . ID=id-GGE_2193-3;Note=HMMPanther:PTHR10953:SF8~molybdopterin biosynthesis moeb protein~HMMPanther:PTHR10953~ubiquitin-activating enzyme e1;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1759 2398 . - . ID=id-GGE_2193-4;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1786 2095 . - . ID=id-GGE_2193-5;Dbxref=InterPro:IPR000594,PFAM:PF00899;Note=thif~uba/thif-type nad/fad binding fold;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1934 1943 . - . ID=id-GGE_2193-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2193 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1747 1798 . + . ID=id-AFQR01000045.1:1747..1798;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1774 2383 . + . ID=id-AFQR01000045.1:1774..2383;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 1855 2320 . + . ID=id-AFQR01000045.1:1855..2320;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank gene 2475 3587 . - . ID=gene-GGE_2194;Name=GGE_2194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2194 GCA_000222085.2|AFQR01000045.1 Genbank CDS 2475 3587 . - 0 ID=cds-EGT78752.1;Parent=gene-GGE_2194;Dbxref=GeneID:145641447,InterPro:IPR005300,InterPro:IPR010611,InterPro:IPR014733,PFAM:PF03562,PFAM:PF06725,NCBI_GP:EGT78752.1;Name=EGT78752.1;Note=ZP_01797025;Ontology_term=GO:0009254,GO:0019867,GO:0004553;gbkey=CDS;go_component=outer membrane|0019867||;go_function=hydrolase activity hydrolyzing O-glycosyl compounds|0004553||;go_process=peptidoglycan turnover|0009254||;locus_tag=GGE_2194;product=membrane-bound lytic murein transglycosylase A precursor;protein_id=EGT78752.1;transl_table=11 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2475 2547 . - . ID=id-GGE_2194;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_2194 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2490 3573 . - . ID=id-GGE_2194-2;Note=multi-dom%3B label: mltA;gbkey=misc_feature;locus_tag=GGE_2194 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2982 3078 . - . ID=id-GGE_2194-3;Dbxref=InterPro:IPR014733;Note=Gene3D:2.40.40.10~barwin-like endoglucanase;gbkey=misc_feature;locus_tag=GGE_2194 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 3372 3381 . - . ID=id-GGE_2194-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2194 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2709 3354 . + . ID=id-AFQR01000045.1:2709..3354;Dbxref=InterPro:IPR010611,PFAM:PF06725;Note=3d~3d;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2712 3351 . + . ID=id-AFQR01000045.1:2712..3351;Note=superfamily%3B label: 3D superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 2865 2907 . + . ID=id-AFQR01000045.1:2865..2907;Dbxref=InterPro:IPR005300,PFAM:PF03562;Note=superfamily~mlta~lytic transglycosylase mlta%3B label: MltA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 3526 3535 . + . ID=id-AFQR01000045.1:3526..3535;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank gene 3980 6115 . + . ID=gene-GGE_2195;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank CDS 3980 6115 . + 0 ID=cds-EGT78753.1;Parent=gene-GGE_2195;Dbxref=GeneID:81336856,InterPro:IPR000241,InterPro:IPR002052,InterPro:IPR004114,InterPro:IPR017244,InterPro:IPR019614,PFAM:PF01170,PFAM:PF02926,PFAM:PF10672,PIR:PIRSF037618,NCBI_GP:EGT78753.1;Name=EGT78753.1;Ontology_term=GO:0032259,GO:0031167,GO:0005737,GO:0008168,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmL;go_component=cytoplasm|0005737||;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,rRNA (guanine-N2-)-methyltransferase activity|0008990||;go_process=methylation|0032259||,rRNA methylation|0031167||;locus_tag=GGE_2195;product=Ribosomal RNA large subunit methyltransferase L;protein_id=EGT78753.1;transl_table=11 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 3980 6113 . + . ID=id-GGE_2195;Dbxref=InterPro:IPR017244,PIR:PIRSF037618;Note=multi-dom~predicted s-adenosyl-l-dependent rna methyltransferase%2C bacterial type~s-adenosyl-l-dependent rna methyltransferase%2C bacteria%3B label: rlmL;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 3992 6104 . + . ID=id-GGE_2195-2;Dbxref=InterPro:IPR017244;Note=HAMAP:MF_01858~23srrna_methyltr_l~s-adenosyl-l-dependent rna methyltransferase%2C bacteria;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4109 4316 . + . ID=id-GGE_2195-3;Dbxref=InterPro:IPR004114;Note=ProfileScan:PS51165~thump~thump;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4148 4277 . + . ID=id-GGE_2195-4;Note=superfamily%3B label: THUMP superfamily;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4148 4274 . + . ID=id-GGE_2195-5;Dbxref=InterPro:IPR004114,PFAM:PF02926;Note=thump~thump;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4397 4682 . + . ID=id-GGE_2195-6;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4466 4622 . + . ID=id-GGE_2195-7;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4466 4619 . + . ID=id-GGE_2195-8;Dbxref=InterPro:IPR000241,PFAM:PF01170;Note=upf0020~putative rna methylase;gbkey=misc_feature;gene=rlmL;locus_tag=GGE_2195 GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4001 4895 . - . ID=id-AFQR01000045.1:4001..4895;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4016 4565 . - . ID=id-AFQR01000045.1:4016..4565;Dbxref=InterPro:IPR000241;Note=PatternScan:PS01261~upf0020~putative rna methylase;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4112 4121 . - . ID=id-AFQR01000045.1:4112..4121;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4178 4751 . - . ID=id-AFQR01000045.1:4178..4751;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4433 5516 . - . ID=id-AFQR01000045.1:4433..5516;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4688 5297 . - . ID=id-AFQR01000045.1:4688..5297;Dbxref=InterPro:IPR019614,PFAM:PF10672;Note=methyltrans_sam~s-adenosylmethionine-dependent methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4712 5381 . - . ID=id-AFQR01000045.1:4712..5381;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4743 4752 . - . ID=id-AFQR01000045.1:4743..4752;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4904 5192 . - . ID=id-AFQR01000045.1:4904..5192;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000045.1 Genbank sequence_feature 4934 5102 . - . ID=id-AFQR01000045.1:4934..5102;Note=HMMPanther:PTHR18895:SF28~subfamily not named~HMMPanther:PTHR18895~family not named;gbkey=misc_feature ##sequence-region AFQR01000044.1 1 3231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000044.1 Genbank region 1 3231 . + . ID=AFQR01000044.1:1..3231;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1 530 . + . ID=id-GeneID:1841333;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank gene 531 1037 . - . ID=gene-GGE_2189;Name=GGE_2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2189 GCA_000222085.2|AFQR01000044.1 Genbank CDS 531 1037 . - 0 ID=cds-EGT78754.1;Parent=gene-GGE_2189;Dbxref=GeneID:1175149,InterPro:IPR019275,PFAM:PF10063,NCBI_GP:EGT78754.1;Name=EGT78754.1;Note=HI_0120;gbkey=CDS;locus_tag=GGE_2189;product=hypothetical protein;protein_id=EGT78754.1;transl_table=11 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 531 1035 . - . ID=id-GGE_2189;Note=superfamily%3B label: DUF2301 superfamily;gbkey=misc_feature;locus_tag=GGE_2189 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 576 591 . - . ID=id-GGE_2189-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2189 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 690 879 . - . ID=id-GGE_2189-3;Dbxref=InterPro:IPR019275,PFAM:PF10063;Note=duf2301~protein of unknown function duf2301;gbkey=misc_feature;locus_tag=GGE_2189 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 573 786 . + . ID=id-AFQR01000044.1:573..786;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 591 921 . + . ID=id-AFQR01000044.1:591..921;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 591 654 . + . ID=id-AFQR01000044.1:591..654;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 600 843 . + . ID=id-AFQR01000044.1:600..843;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 600 756 . + . ID=id-AFQR01000044.1:600..756;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1098 1107 . + . ID=id-AFQR01000044.1:1098..1107;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1133 1142 . - . ID=id-AFQR01000044.1:1133..1142;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank gene 1146 2507 . - . ID=gene-GGE_2190;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank CDS 1146 2507 . - 0 ID=cds-EGT78755.1;Parent=gene-GGE_2190;Dbxref=GeneID:1176353,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005757,InterPro:IPR013221,InterPro:IPR016040,PFAM:PF01225,PFAM:PF02875,PFAM:PF08245,TIGRFAM:TIGR01081,NCBI_GP:EGT78755.1;Name=EGT78755.1;Ontology_term=GO:0009058,GO:0007047,GO:0008152,GO:0005524,GO:0005488,GO:0003824,GO:0016874;gbkey=CDS;gene=mpl;go_function=ATP binding|0005524||,binding|0005488||,catalytic activity|0003824||,ligase activity|0016874||;go_process=biosynthetic process|0009058||,cellular cell wall organization|0007047||,metabolic process|0008152||;locus_tag=GGE_2190;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=EGT78755.1;transl_table=11 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1146 1419 . - . ID=id-GGE_2190;Note=superfamily:SSF51984~murcd n-terminal domain;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1152 1410 . - . ID=id-GGE_2190-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1155 2493 . - . ID=id-GGE_2190-3;Dbxref=InterPro:IPR005757,TIGRFAM:TIGR01081;Note=multi-dom~mpl: udp-n-acetylmuramate:l-alanyl-gamma-d-g~murein peptide ligase%3B label: mpl;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1155 2484 . - . ID=id-GGE_2190-4;Note=HMMPanther:PTHR23135:SF8~subfamily not named~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1155 1452 . - . ID=id-GGE_2190-5;Note=superfamily%3B label: Mur_ligase superfamily;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1155 1443 . - . ID=id-GGE_2190-6;Dbxref=InterPro:IPR000713,PFAM:PF01225;Note=mur_ligase~mur ligase;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1410 1815 . - . ID=id-GGE_2190-7;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1422 1803 . - . ID=id-GGE_2190-8;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1473 1698 . - . ID=id-GGE_2190-9;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=mur_ligase_m~mur ligase%2C central;gbkey=misc_feature;gene=mpl;locus_tag=GGE_2190 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1185 1479 . + . ID=id-AFQR01000044.1:1185..1479;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1194 1986 . + . ID=id-AFQR01000044.1:1194..1986;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1287 2085 . + . ID=id-AFQR01000044.1:1287..2085;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1296 2085 . + . ID=id-AFQR01000044.1:1296..2085;Dbxref=InterPro:IPR004101,PFAM:PF02875;Note=mur_ligase_c~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1563 2085 . + . ID=id-AFQR01000044.1:1563..2085;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 1566 2079 . + . ID=id-AFQR01000044.1:1566..2079;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank gene 2651 3226 . + . ID=gene-GGE_2191;Name=GGE_2191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2191 GCA_000222085.2|AFQR01000044.1 Genbank CDS 2651 3226 . + 0 ID=cds-EGT78756.1;Parent=gene-GGE_2191;Dbxref=NCBI_GP:EGT78756.1;Name=EGT78756.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_2191;product=putative lipoprotein;protein_id=EGT78756.1;transl_table=11 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 2651 2732 . + . ID=id-GGE_2191;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_2191 GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 2687 3062 . - . ID=id-AFQR01000044.1:2687..3062;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 2696 2864 . - . ID=id-AFQR01000044.1:2696..2864;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000044.1 Genbank sequence_feature 2723 2756 . - . ID=id-AFQR01000044.1:2723..2756;Note=seg;gbkey=misc_feature ##sequence-region AFQR01000043.1 1 28112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000043.1 Genbank region 1 28112 . + . ID=AFQR01000043.1:1..28112;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 3 12 . + . ID=id-AFQR01000043.1:3..12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 80 583 . - . ID=gene-GGE_2155;Name=GGE_2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2155 GCA_000222085.2|AFQR01000043.1 Genbank CDS 80 583 . - 0 ID=cds-EGT78757.1;Parent=gene-GGE_2155;Dbxref=GeneID:319776708,InterPro:IPR008565,InterPro:IPR018537,PFAM:PF05838,PFAM:PF09374,NCBI_GP:EGT78757.1;Name=EGT78757.1;Note=YP_004139196;gbkey=CDS;locus_tag=GGE_2155;product=putative peptidoglycan binding domain-containing protein;protein_id=EGT78757.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 92 560 . - . ID=id-GGE_2155;Note=Gene3D:1.20.141.10;gbkey=misc_feature;locus_tag=GGE_2155 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 101 329 . - . ID=id-GGE_2155-2;Dbxref=InterPro:IPR008565,PFAM:PF05838;Note=superfamily~duf847~protein of unknown function duf847%3B label: DUF847 superfamily;gbkey=misc_feature;locus_tag=GGE_2155 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 272 356 . + . ID=id-AFQR01000043.1:272..356;Dbxref=InterPro:IPR018537,PFAM:PF09374;Note=superfamily~pg_binding_3~peptidoglycan binding domain%3B label: PG_binding_3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 1184 1618 . - . ID=gene-GGE_2156;Name=GGE_2156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2156 GCA_000222085.2|AFQR01000043.1 Genbank CDS 1184 1618 . - 0 ID=cds-EGT78758.1;Parent=gene-GGE_2156;Dbxref=InterPro:IPR009057,InterPro:IPR014875,PFAM:PF08765,NCBI_GP:EGT78758.1;Name=EGT78758.1;Note=Hypothetical homeodomain-like;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_2156;product=putative homeodomain-like protein;protein_id=EGT78758.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 1196 1604 . - . ID=id-GGE_2156;Note=superfamily%3B label: Mor superfamily;gbkey=misc_feature;locus_tag=GGE_2156 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 1295 1502 . - . ID=id-GGE_2156-2;Dbxref=InterPro:IPR014875,PFAM:PF08765;Note=mor~mor transcription activator;gbkey=misc_feature;locus_tag=GGE_2156 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 1295 1478 . - . ID=id-GGE_2156-3;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_2156 GCA_000222085.2|AFQR01000043.1 Genbank gene 1768 2328 . - . ID=gene-GGE_2157;Name=GGE_2157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2157 GCA_000222085.2|AFQR01000043.1 Genbank CDS 1768 2328 . - 0 ID=cds-EGT78759.1;Parent=gene-GGE_2157;Dbxref=GeneID:145637168,NCBI_GP:EGT78759.1;Name=EGT78759.1;Note=ZP_01792830~CGSHiHH_00593;gbkey=CDS;locus_tag=GGE_2157;product=Hypothetical protein;protein_id=EGT78759.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 2304 2762 . - . ID=gene-GGE_2158;Name=GGE_2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2158 GCA_000222085.2|AFQR01000043.1 Genbank CDS 2304 2762 . - 0 ID=cds-EGT78760.1;Parent=gene-GGE_2158;Dbxref=GeneID:145633943,InterPro:IPR009363,PFAM:PF06252,NCBI_GP:EGT78760.1;Name=EGT78760.1;Note=ZP_01789663;gbkey=CDS;locus_tag=GGE_2158;product=Mu-like phage E16 protein;protein_id=EGT78760.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 2367 2691 . - . ID=id-GGE_2158;Dbxref=InterPro:IPR009363,PFAM:PF06252;Note=superfamily~duf1018~protein of unknown function gp16%3B label: DUF1018 superfamily;gbkey=misc_feature;locus_tag=GGE_2158 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 2873 2951 . - . ID=id-AFQR01000043.1:2873..2951;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 3182 3556 . - . ID=gene-GGE_2159;Name=GGE_2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2159 GCA_000222085.2|AFQR01000043.1 Genbank CDS 3182 3556 . - 0 ID=cds-EGT78761.1;Parent=gene-GGE_2159;Dbxref=GeneID:319896837,NCBI_GP:EGT78761.1;Name=EGT78761.1;Note=YP_004135032;gbkey=CDS;locus_tag=GGE_2159;product=Hypothetical protein;protein_id=EGT78761.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 3629 3847 . - . ID=gene-GGE_2160;Name=GGE_2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2160 GCA_000222085.2|AFQR01000043.1 Genbank CDS 3629 3847 . - 0 ID=cds-EGT78762.1;Parent=gene-GGE_2160;Dbxref=GeneID:145633944,NCBI_GP:EGT78762.1;Name=EGT78762.1;Note=ZP_01789664~CGSHi3655_00210;gbkey=CDS;locus_tag=GGE_2160;product=Hypothetical protein;protein_id=EGT78762.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 3844 4002 . - . ID=gene-GGE_2161;Name=GGE_2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2161 GCA_000222085.2|AFQR01000043.1 Genbank CDS 3844 4002 . - 0 ID=cds-EGT78763.1;Parent=gene-GGE_2161;Dbxref=GeneID:54654561,NCBI_GP:EGT78763.1;Name=EGT78763.1;Note=AAV37139;gbkey=CDS;locus_tag=GGE_2161;product=Hypothetical protein;protein_id=EGT78763.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 4013 4210 . - . ID=gene-GGE_2162;Name=GGE_2162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2162 GCA_000222085.2|AFQR01000043.1 Genbank CDS 4013 4210 . - 0 ID=cds-EGT78764.1;Parent=gene-GGE_2162;Dbxref=GeneID:229844281,InterPro:IPR020107,NCBI_GP:EGT78764.1;Name=EGT78764.1;Note=ZP_04464421;gbkey=CDS;locus_tag=GGE_2162;product=Hypothetical protein;protein_id=EGT78764.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4046 4154 . - . ID=id-GGE_2162;Dbxref=InterPro:IPR020107;Note=BlastProDom:PD056718~q7vnl8_haedu_q7vnl8~uncharacterised protein family hi1485;gbkey=misc_feature;locus_tag=GGE_2162 GCA_000222085.2|AFQR01000043.1 Genbank gene 4315 4461 . - . ID=gene-GGE_2163;Name=GGE_2163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2163 GCA_000222085.2|AFQR01000043.1 Genbank CDS 4315 4461 . - 0 ID=cds-EGT78765.1;Parent=gene-GGE_2163;Dbxref=GeneID:260580267,NCBI_GP:EGT78765.1;Name=EGT78765.1;Note=ZP_05848096;gbkey=CDS;locus_tag=GGE_2163;product=Hypothetical protein;protein_id=EGT78765.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 4461 4982 . - . ID=gene-GGE_2164;Name=GGE_2164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank CDS 4461 4982 . - 0 ID=cds-EGT78766.1;Parent=gene-GGE_2164;Dbxref=GeneID:145635266,InterPro:IPR009951,PFAM:PF07352,NCBI_GP:EGT78766.1;Name=EGT78766.1;Note=ZP_01790970;Ontology_term=GO:0042262,GO:0003690;gbkey=CDS;go_function=double-stranded DNA binding|0003690||;go_process=DNA protection|0042262||;locus_tag=GGE_2164;product=putative inorganic polyphosphate/ATP-NAD kinase-like protein;protein_id=EGT78766.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4461 4758 . - . ID=id-GGE_2164;Note=superfamily%3B label: Phage_Mu_Gam superfamily;gbkey=misc_feature;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4461 4746 . - . ID=id-GGE_2164-2;Dbxref=InterPro:IPR009951,PFAM:PF07352;Note=phage_mu_gam~bacteriophage mu gam-like;gbkey=misc_feature;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4470 4968 . - . ID=id-GGE_2164-3;Note=superfamily%3B label: Phage_Mu_Gam superfamily;gbkey=misc_feature;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4518 4908 . - . ID=id-GGE_2164-4;Dbxref=InterPro:IPR009951,PFAM:PF07352;Note=phage_mu_gam~bacteriophage mu gam-like;gbkey=misc_feature;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 4521 4569 . - . ID=id-GGE_2164-5;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_2164 GCA_000222085.2|AFQR01000043.1 Genbank gene 5000 5329 . - . ID=gene-GGE_2165;Name=GGE_2165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2165 GCA_000222085.2|AFQR01000043.1 Genbank CDS 5000 5329 . - 0 ID=cds-EGT78767.1;Parent=gene-GGE_2165;Dbxref=GeneID:145633901,NCBI_GP:EGT78767.1;Name=EGT78767.1;Note=ZP_01789622~CGSHi3655_08574;gbkey=CDS;locus_tag=GGE_2165;product=Hypothetical protein;protein_id=EGT78767.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5297 5306 . + . ID=id-AFQR01000043.1:5297..5306;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 5329 6246 . - . ID=gene-GGE_2166;Name=GGE_2166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank CDS 5329 6246 . - 0 ID=cds-EGT78768.1;Parent=gene-GGE_2166;Dbxref=GeneID:145633900,InterPro:IPR001387,InterPro:IPR009084,PFAM:PF01381,PFAM:PF09077,NCBI_GP:EGT78768.1;Name=EGT78768.1;Note=ZP_01789621;Ontology_term=GO:0006313,GO:0005524,GO:0003677,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,sequence-specific DNA binding|0043565||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_2166;product=N-acetylglucosamine-1-phosphate uridyltransferase-like protein;protein_id=EGT78768.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5329 6229 . - . ID=id-GGE_2166;Note=multi-dom%3B label: COG2842;gbkey=misc_feature;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5329 5470 . - . ID=id-GGE_2166-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5350 5428 . - . ID=id-GGE_2166-3;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5491 6073 . - . ID=id-GGE_2166-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5605 5680 . - . ID=id-GGE_2166-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2166 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5569 5995 . + . ID=id-AFQR01000043.1:5569..5995;Dbxref=InterPro:IPR009084,PFAM:PF09077;Note=superfamily~phage-mub_c~b transposition protein%3B label: Phage-MuB_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5578 5992 . + . ID=id-AFQR01000043.1:5578..5992;Dbxref=InterPro:IPR009084;Note=Gene3D:1.10.1180.10~b transposition protein;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 5581 5992 . + . ID=id-AFQR01000043.1:5581..5992;Dbxref=InterPro:IPR009084;Note=superfamily:SSF47681~c-terminal domain of b transposition protein~b transposition protein;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6033 6042 . + . ID=id-AFQR01000043.1:6033..6042;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 6270 8276 . - . ID=gene-GGE_2167;Name=GGE_2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank CDS 6270 8276 . - 0 ID=cds-EGT78769.1;Parent=gene-GGE_2167;Dbxref=GeneID:145633899,InterPro:IPR003314,InterPro:IPR004189,InterPro:IPR009004,InterPro:IPR009057,InterPro:IPR009061,InterPro:IPR011991,InterPro:IPR012287,InterPro:IPR012337,InterPro:IPR015126,InterPro:IPR015378,PFAM:PF02316,PFAM:PF02914,PFAM:PF09039,PFAM:PF09299,NCBI_GP:EGT78769.1;Name=EGT78769.1;Note=ZP_01789620;Ontology_term=GO:0015074,GO:0045449,GO:0006313,GO:0003677,GO:0003676,GO:0000166,GO:0005515,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,nucleic acid binding|0003676||,nucleotide binding|0000166||,protein binding|0005515||,transposase activity|0004803||;go_process=DNA integration|0015074||,regulation of transcription|0045449||,transposition DNA-mediated|0006313||;locus_tag=GGE_2167;product=transposase;protein_id=EGT78769.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6303 6495 . - . ID=id-GGE_2167;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6303 6477 . - . ID=id-GGE_2167-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6339 6594 . - . ID=id-GGE_2167-3;Note=superfamily%3B label: Mu_DNA_bind superfamily;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6342 6552 . - . ID=id-GGE_2167-4;Dbxref=InterPro:IPR003314,PFAM:PF02316;Note=mu_dna_bind~transposase mua/repressor ci%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6516 6570 . - . ID=id-GGE_2167-5;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6537 6543 . - . ID=id-GGE_2167-6;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8046 8055 . - . ID=id-GGE_2167-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2167 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6315 6816 . + . ID=id-AFQR01000043.1:6315..6816;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6318 8019 . + . ID=id-AFQR01000043.1:6318..8019;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6471 7770 . + . ID=id-AFQR01000043.1:6471..7770;Dbxref=InterPro:IPR009004;Note=Gene3D:2.30.30.130~transposase%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6489 7746 . + . ID=id-AFQR01000043.1:6489..7746;Dbxref=InterPro:IPR015378,PFAM:PF09299;Note=superfamily~mu-transpos_c~transposase-like%2C mu%3B label: Mu-transpos_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6489 6816 . + . ID=id-AFQR01000043.1:6489..6816;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6498 6807 . + . ID=id-AFQR01000043.1:6498..6807;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6510 7734 . + . ID=id-AFQR01000043.1:6510..7734;Dbxref=InterPro:IPR015378;Note=superfamily:SSF50610~mu transposase domain~transposase-like%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6594 6738 . + . ID=id-AFQR01000043.1:6594..6738;Dbxref=InterPro:IPR015126,PFAM:PF09039;Note=superfamily~mu_i-gamma~mu dna binding%2C i gamma subdomain%3B label: Mu_I-gamma superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6915 7086 . + . ID=id-AFQR01000043.1:6915..7086;Note=BlastProDom:PD223702~q8edt9_sheon_q8edt9;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6918 7062 . + . ID=id-AFQR01000043.1:6918..7062;Dbxref=InterPro:IPR004189,PFAM:PF02914;Note=superfamily~mu_transposase~transposase%2C bacteriophage mu-type%3B label: rve superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6939 7065 . + . ID=id-AFQR01000043.1:6939..7065;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 6984 7038 . + . ID=id-AFQR01000043.1:6984..7038;Note=Gene3D:3.30.420.10;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 8255 8467 . - . ID=gene-GGE_2168;Name=GGE_2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2168 GCA_000222085.2|AFQR01000043.1 Genbank CDS 8255 8467 . - 0 ID=cds-EGT78770.1;Parent=gene-GGE_2168;Dbxref=GeneID:145633897,InterPro:IPR010982,NCBI_GP:EGT78770.1;Name=EGT78770.1;Note=ZP_01789618;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_2168;product=Ner;protein_id=EGT78770.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8255 8462 . - . ID=id-GGE_2168;Dbxref=InterPro:IPR010982;Note=superfamily~superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding%3B label: Nlp superfamily;gbkey=misc_feature;locus_tag=GGE_2168 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8261 8462 . - . ID=id-GGE_2168-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_2168 GCA_000222085.2|AFQR01000043.1 Genbank gene 8617 9429 . + . ID=gene-GGE_2169;Name=GGE_2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank CDS 8617 9429 . + 0 ID=cds-EGT78771.1;Parent=gene-GGE_2169;Dbxref=GeneID:145633896,InterPro:IPR003314,InterPro:IPR009061,InterPro:IPR011056,InterPro:IPR011991,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,PFAM:PF02316,NCBI_GP:EGT78771.1;Name=EGT78771.1;Note=ZP_01789617;Ontology_term=GO:0003677,GO:0000166;gbkey=CDS;go_function=DNA binding|0003677||,nucleotide binding|0000166||;locus_tag=GGE_2169;product=Putative transcription regulator;protein_id=EGT78771.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8683 8821 . + . ID=id-GGE_2169;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8686 8794 . + . ID=id-GGE_2169-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8707 8767 . + . ID=id-GGE_2169-3;Dbxref=InterPro:IPR003314,PFAM:PF02316;Note=mu_dna_bind~transposase mua/repressor ci%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8713 8767 . + . ID=id-GGE_2169-4;Note=superfamily%3B label: Mu_DNA_bind superfamily;gbkey=misc_feature;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 9013 9028 . + . ID=id-GGE_2169-5;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;locus_tag=GGE_2169 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8653 8875 . - . ID=id-AFQR01000043.1:8653..8875;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8677 8920 . - . ID=id-AFQR01000043.1:8677..8920;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8815 9169 . - . ID=id-AFQR01000043.1:8815..9169;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 8860 9157 . - . ID=id-AFQR01000043.1:8860..9157;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 9001 9043 . - . ID=id-AFQR01000043.1:9001..9043;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 9521 9551 . - . ID=id-AFQR01000043.1:9521..9551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10008 10017 . + . ID=id-AFQR01000043.1:10008..10017;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 10035 11189 . - . ID=gene-GGE_2170;Name=GGE_2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2170 GCA_000222085.2|AFQR01000043.1 Genbank CDS 10035 11189 . - 0 ID=cds-EGT78772.1;Parent=gene-GGE_2170;Dbxref=InterPro:IPR018875,InterPro:IPR018876,PFAM:PF10547,PFAM:PF10548,NCBI_GP:EGT78772.1;Name=EGT78772.1;Note=Hypothetical antirepressor-like protein;gbkey=CDS;locus_tag=GGE_2170;product=putative antirepressor-like protein;protein_id=EGT78772.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10314 10389 . - . ID=id-GGE_2170;Dbxref=InterPro:IPR018875,PFAM:PF10547;Note=superfamily~p22_ar_n~antirepressor protein ant%3B label: P22_AR_N superfamily;gbkey=misc_feature;locus_tag=GGE_2170 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10101 10380 . + . ID=id-AFQR01000043.1:10101..10380;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10104 10590 . + . ID=id-AFQR01000043.1:10104..10590;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10107 10518 . + . ID=id-AFQR01000043.1:10107..10518;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10239 10902 . + . ID=id-AFQR01000043.1:10239..10902;Note=superfamily%3B label: P22_AR_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 10245 10896 . + . ID=id-AFQR01000043.1:10245..10896;Dbxref=InterPro:IPR018876,PFAM:PF10548;Note=p22_ar_c~phage p22%2C antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 11253 11630 . - . ID=gene-GGE_2171;Name=GGE_2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2171 GCA_000222085.2|AFQR01000043.1 Genbank CDS 11253 11630 . - 0 ID=cds-EGT78773.1;Parent=gene-GGE_2171;Dbxref=NCBI_GP:EGT78773.1;Name=EGT78773.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_2171;product=putative lipoprotein;protein_id=EGT78773.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11253 11304 . - . ID=id-GGE_2171;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_2171 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11265 11292 . - . ID=id-GGE_2171-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_2171 GCA_000222085.2|AFQR01000043.1 Genbank gene 11725 14943 . - . ID=gene-GGE_2172;Name=GGE_2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2172 GCA_000222085.2|AFQR01000043.1 Genbank CDS 11725 14943 . - 0 ID=cds-EGT78774.1;Parent=gene-GGE_2172;Dbxref=GeneID:322514070,InterPro:IPR006431,InterPro:IPR009302,InterPro:IPR013491,PFAM:PF06120,PFAM:PF09718,TIGRFAM:TIGR01541,TIGRFAM:TIGR02675,NCBI_GP:EGT78774.1;Name=EGT78774.1;Note=ZP_08067141;gbkey=CDS;locus_tag=GGE_2172;product=putative phage tail protein;protein_id=EGT78774.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 12973 13009 . - . ID=id-GGE_2172;Note=multi-dom%3B label: SbcC;gbkey=misc_feature;locus_tag=GGE_2172 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11761 14554 . + . ID=id-AFQR01000043.1:11761..14554;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11761 12820 . + . ID=id-AFQR01000043.1:11761..12820;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11761 11887 . + . ID=id-AFQR01000043.1:11761..11887;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11770 13480 . + . ID=id-AFQR01000043.1:11770..13480;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11791 13801 . + . ID=id-AFQR01000043.1:11791..13801;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11791 13102 . + . ID=id-AFQR01000043.1:11791..13102;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11812 14179 . + . ID=id-AFQR01000043.1:11812..14179;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11812 12670 . + . ID=id-AFQR01000043.1:11812..12670;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11833 13231 . + . ID=id-AFQR01000043.1:11833..13231;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11950 14260 . + . ID=id-AFQR01000043.1:11950..14260;Dbxref=PFAM:PF09718;Note=tape_meas_lam_c;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11950 12133 . + . ID=id-AFQR01000043.1:11950..12133;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675;Note=superfamily~tape_meas_nterm: tape measure domain~tape measure domain%3B label: COG3941 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 11956 14257 . + . ID=id-AFQR01000043.1:11956..14257;Note=superfamily%3B label: Tape_meas_lam_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 12079 12871 . + . ID=id-AFQR01000043.1:12079..12871;Dbxref=InterPro:IPR009302,PFAM:PF06120;Note=phage_hk97_tltm~tail length tape measure;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 12238 12886 . + . ID=id-AFQR01000043.1:12238..12886;Note=superfamily%3B label: Phage_HK97_TLTM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 12715 13816 . + . ID=id-AFQR01000043.1:12715..13816;Dbxref=InterPro:IPR006431,TIGRFAM:TIGR01541;Note=multi-dom~tape_meas_lam_c: phage tail tape meas~phage tail tape measure protein%3B label: tape_meas_lam_C;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 14953 15285 . - . ID=gene-GGE_2173;Name=GGE_2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2173 GCA_000222085.2|AFQR01000043.1 Genbank CDS 14953 15285 . - 0 ID=cds-EGT78775.1;Parent=gene-GGE_2173;Dbxref=GeneID:219870667,InterPro:IPR010265,PFAM:PF05939,NCBI_GP:EGT78775.1;Name=EGT78775.1;Note=YP_002475042;gbkey=CDS;locus_tag=GGE_2173;product=phage minor tail protein;protein_id=EGT78775.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 14962 15277 . - . ID=id-GGE_2173;Note=superfamily%3B label: Phage_min_tail superfamily;gbkey=misc_feature;locus_tag=GGE_2173 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 14962 15274 . - . ID=id-GGE_2173-2;Dbxref=InterPro:IPR010265,PFAM:PF05939;Note=phage_min_tail~phage minor tail;gbkey=misc_feature;locus_tag=GGE_2173 GCA_000222085.2|AFQR01000043.1 Genbank gene 15656 16060 . - . ID=gene-GGE_2174;Name=GGE_2174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2174 GCA_000222085.2|AFQR01000043.1 Genbank CDS 15656 16060 . - 0 ID=cds-EGT78776.1;Parent=gene-GGE_2174;Dbxref=GeneID:167856529,NCBI_GP:EGT78776.1;Name=EGT78776.1;Note=ZP_02479239~HPS_11497;gbkey=CDS;locus_tag=GGE_2174;product=Hypothetical protein;protein_id=EGT78776.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 15692 15866 . + . ID=id-AFQR01000043.1:15692..15866;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 16149 16158 . - . ID=id-AFQR01000043.1:16149..16158;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 16158 17168 . - . ID=gene-GGE_2175;Name=GGE_2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2175 GCA_000222085.2|AFQR01000043.1 Genbank CDS 16158 17168 . - 0 ID=cds-EGT78777.1;Parent=gene-GGE_2175;Dbxref=GeneID:254362884,NCBI_GP:EGT78777.1;Name=EGT78777.1;Note=ZP_04978959~MHA_2474;gbkey=CDS;locus_tag=GGE_2175;product=Hypothetical protein;protein_id=EGT78777.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 16194 16266 . + . ID=id-AFQR01000043.1:16194..16266;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 17177 17569 . - . ID=gene-GGE_2176;Name=GGE_2176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2176 GCA_000222085.2|AFQR01000043.1 Genbank CDS 17177 17569 . - 0 ID=cds-EGT78778.1;Parent=gene-GGE_2176;Dbxref=GeneID:167856527,NCBI_GP:EGT78778.1;Name=EGT78778.1;Note=ZP_02479237~HPS_11487;gbkey=CDS;locus_tag=GGE_2176;product=Hypothetical protein;protein_id=EGT78778.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 17321 17336 . - . ID=id-GGE_2176;Note=superfamily%3B label: Nudix_Hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_2176 GCA_000222085.2|AFQR01000043.1 Genbank gene 17576 17968 . - . ID=gene-GGE_2177;Name=GGE_2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2177 GCA_000222085.2|AFQR01000043.1 Genbank CDS 17576 17968 . - 0 ID=cds-EGT78779.1;Parent=gene-GGE_2177;Dbxref=GeneID:254362882,InterPro:IPR006967,PFAM:PF04883,NCBI_GP:EGT78779.1;Name=EGT78779.1;Note=ZP_04978957;gbkey=CDS;locus_tag=GGE_2177;product=putative bacteriophage protein;protein_id=EGT78779.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 17588 17924 . - . ID=id-GGE_2177;Dbxref=InterPro:IPR006967,PFAM:PF04883;Note=duf646~protein of unknown function duf646%2C phage head/tail component;gbkey=misc_feature;locus_tag=GGE_2177 GCA_000222085.2|AFQR01000043.1 Genbank gene 17961 18362 . - . ID=gene-GGE_2178;Name=GGE_2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2178 GCA_000222085.2|AFQR01000043.1 Genbank CDS 17961 18362 . - 0 ID=cds-EGT78780.1;Parent=gene-GGE_2178;Dbxref=GeneID:254362881,NCBI_GP:EGT78780.1;Name=EGT78780.1;Note=ZP_04978956~MHA_2471;gbkey=CDS;locus_tag=GGE_2178;product=Hypothetical protein;protein_id=EGT78780.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 18018 18213 . + . ID=id-AFQR01000043.1:18018..18213;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 18365 18802 . - . ID=gene-GGE_2179;Name=GGE_2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2179 GCA_000222085.2|AFQR01000043.1 Genbank CDS 18365 18802 . - 0 ID=cds-EGT78781.1;Parent=gene-GGE_2179;Dbxref=GeneID:254362880,NCBI_GP:EGT78781.1;Name=EGT78781.1;Note=ZP_04978955;gbkey=CDS;locus_tag=GGE_2179;product=putative bacteriophage protein;protein_id=EGT78781.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 18942 19892 . - . ID=gene-GGE_2180;Name=GGE_2180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2180 GCA_000222085.2|AFQR01000043.1 Genbank CDS 18942 19892 . - 0 ID=cds-EGT78782.1;Parent=gene-GGE_2180;Dbxref=GeneID:254362878,NCBI_GP:EGT78782.1;Name=EGT78782.1;Note=ZP_04978953;gbkey=CDS;locus_tag=GGE_2180;product=putative bacteriophage protein;protein_id=EGT78782.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 19958 20692 . - . ID=gene-GGE_2181;Name=GGE_2181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2181 GCA_000222085.2|AFQR01000043.1 Genbank CDS 19958 20692 . - 0 ID=cds-EGT78783.1;Parent=gene-GGE_2181;Dbxref=GeneID:254362877,NCBI_GP:EGT78783.1;Name=EGT78783.1;Note=ZP_04978952~MHA_2467;gbkey=CDS;locus_tag=GGE_2181;product=Hypothetical protein;protein_id=EGT78783.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20003 20579 . + . ID=id-AFQR01000043.1:20003..20579;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20024 20261 . + . ID=id-AFQR01000043.1:20024..20261;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20045 20054 . + . ID=id-AFQR01000043.1:20045..20054;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 20809 21348 . - . ID=gene-GGE_2182;Name=GGE_2182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2182 GCA_000222085.2|AFQR01000043.1 Genbank CDS 20809 21348 . - 0 ID=cds-EGT78784.1;Parent=gene-GGE_2182;Dbxref=GeneID:16273319,InterPro:IPR014054,InterPro:IPR018877,InterPro:IPR019104,PFAM:PF09669,PFAM:PF10549,TIGRFAM:TIGR02681,NCBI_GP:EGT78784.1;Name=EGT78784.1;Note=NP_439563;gbkey=CDS;locus_tag=GGE_2182;product=putative phage regulatory protein%2C Rha;protein_id=EGT78784.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20833 21283 . - . ID=id-GGE_2182;Note=multi-dom%3B label: COG3646;gbkey=misc_feature;locus_tag=GGE_2182 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20839 21124 . - . ID=id-GGE_2182-2;Dbxref=InterPro:IPR014054,TIGRFAM:TIGR02681;Note=phage_prha: phage regulatory protein%2C rha~phage regulatory protein%2C rha;gbkey=misc_feature;locus_tag=GGE_2182 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20875 21064 . - . ID=id-GGE_2182-3;Dbxref=InterPro:IPR019104,PFAM:PF09669;Note=superfamily~phage_prha~phage regulatory protein%2C rha-like%3B label: Phage_pRha superfamily;gbkey=misc_feature;locus_tag=GGE_2182 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20875 21235 . + . ID=id-AFQR01000043.1:20875..21235;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20971 21157 . + . ID=id-AFQR01000043.1:20971..21157;Dbxref=InterPro:IPR018877,PFAM:PF10549;Note=orf11cd3~pseudomonas phage d3%2C orf11;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 20971 21151 . + . ID=id-AFQR01000043.1:20971..21151;Note=superfamily%3B label: ORF11CD3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 21493 21544 . - . ID=id-AFQR01000043.1:21493..21544;Note=multi-dom%3B label: PRK10929;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 22174 23568 . - . ID=gene-GGE_2183;Name=GGE_2183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2183 GCA_000222085.2|AFQR01000043.1 Genbank CDS 22174 23568 . - 0 ID=cds-EGT78785.1;Parent=gene-GGE_2183;Dbxref=InterPro:IPR006528,PFAM:PF04233,TIGRFAM:TIGR01641,NCBI_GP:EGT78785.1;Name=EGT78785.1;Note=Hypothetical phage putative head morphogenesis protein%2C SPP1 Gp7;gbkey=CDS;locus_tag=GGE_2183;product=putative phage putative head morphogenesis protein%2C SPP1 Gp7;protein_id=EGT78785.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 22240 22360 . + . ID=id-AFQR01000043.1:22240..22360;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 22489 22642 . + . ID=id-AFQR01000043.1:22489..22642;Dbxref=InterPro:IPR006528,PFAM:PF04233;Note=phage_mu_f~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 22516 22630 . + . ID=id-AFQR01000043.1:22516..22630;Note=superfamily%3B label: Phage_Mu_F superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 22519 22630 . + . ID=id-AFQR01000043.1:22519..22630;Dbxref=InterPro:IPR006528,TIGRFAM:TIGR01641;Note=phagespp1_gp7: phage putative head morp~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 23534 24922 . - . ID=gene-GGE_2184;Name=GGE_2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2184 GCA_000222085.2|AFQR01000043.1 Genbank CDS 23534 24922 . - 0 ID=cds-EGT78786.1;Parent=gene-GGE_2184;Dbxref=GeneID:254362873,NCBI_GP:EGT78786.1;Name=EGT78786.1;Note=ZP_04978948;gbkey=CDS;locus_tag=GGE_2184;product=putative bacteriophage protein;protein_id=EGT78786.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 23576 24515 . + . ID=id-AFQR01000043.1:23576..24515;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 24932 26167 . - . ID=gene-GGE_2185;Name=GGE_2185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2185 GCA_000222085.2|AFQR01000043.1 Genbank CDS 24932 26167 . - 0 ID=cds-EGT78787.1;Parent=gene-GGE_2185;Dbxref=GeneID:303251622,InterPro:IPR006437,InterPro:IPR006701,PFAM:PF04466,TIGRFAM:TIGR01547,NCBI_GP:EGT78787.1;Name=EGT78787.1;Note=ZP_07337796;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_2185;product=putative phage terminase%2C large subunit%2C PBSX;protein_id=EGT78787.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 24992 26075 . - . ID=id-GGE_2185;Dbxref=InterPro:IPR006437,TIGRFAM:TIGR01547;Note=phage_term_2: phage terminase%2C large sub~phage terminase%2C large subunit%2C pbsx;gbkey=misc_feature;locus_tag=GGE_2185 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 24995 26051 . - . ID=id-GGE_2185-2;Dbxref=InterPro:IPR006701,PFAM:PF04466;Note=terminase_3~phage terminase large subunit;gbkey=misc_feature;locus_tag=GGE_2185 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 25025 26021 . - . ID=id-GGE_2185-3;Note=superfamily%3B label: Terminase_3 superfamily;gbkey=misc_feature;locus_tag=GGE_2185 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 25323 25332 . - . ID=id-GGE_2185-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2185 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 24962 24995 . + . ID=id-AFQR01000043.1:24962..24995;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 26160 26672 . - . ID=gene-GGE_2186;Name=GGE_2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2186 GCA_000222085.2|AFQR01000043.1 Genbank CDS 26160 26672 . - 0 ID=cds-EGT78788.1;Parent=gene-GGE_2186;Dbxref=GeneID:303251623,InterPro:IPR005335,PFAM:PF03592,NCBI_GP:EGT78788.1;Name=EGT78788.1;Note=ZP_07337797;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_2186;product=putative terminase small subunit;protein_id=EGT78788.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 26217 26604 . - . ID=id-GGE_2186;Note=superfamily%3B label: Terminase_2 superfamily;gbkey=misc_feature;locus_tag=GGE_2186 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 26217 26553 . - . ID=id-GGE_2186-2;Dbxref=InterPro:IPR005335,PFAM:PF03592;Note=terminase_2~terminase small subunit;gbkey=misc_feature;locus_tag=GGE_2186 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 26828 26948 . + . ID=id-AFQR01000043.1:26828..26948;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank gene 26979 27254 . - . ID=gene-GGE_2187;Name=GGE_2187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2187 GCA_000222085.2|AFQR01000043.1 Genbank CDS 26979 27254 . - 0 ID=cds-EGT78789.1;Parent=gene-GGE_2187;Dbxref=GeneID:261495955,NCBI_GP:EGT78789.1;Name=EGT78789.1;Note=ZP_05992372~COI_1701;gbkey=CDS;locus_tag=GGE_2187;product=Hypothetical protein;protein_id=EGT78789.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank gene 27443 27766 . - . ID=gene-GGE_2188;Name=GGE_2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2188 GCA_000222085.2|AFQR01000043.1 Genbank CDS 27443 27766 . - 0 ID=cds-EGT78790.1;Parent=gene-GGE_2188;Dbxref=GeneID:315634506,InterPro:IPR022538,PFAM:PF10828,NCBI_GP:EGT78790.1;Name=EGT78790.1;Note=ZP_07889791;gbkey=CDS;locus_tag=GGE_2188;product=Hypothetical protein;protein_id=EGT78790.1;transl_table=11 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 27443 27758 . - . ID=id-GGE_2188;Dbxref=InterPro:IPR022538,PFAM:PF10828;Note=duf2570~protein of unknown function duf2570;gbkey=misc_feature;locus_tag=GGE_2188 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 27455 27500 . - . ID=id-GGE_2188-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2188 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 27470 27479 . - . ID=id-GGE_2188-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_2188 GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 27500 27539 . + . ID=id-AFQR01000043.1:27500..27539;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000043.1 Genbank sequence_feature 27509 27617 . + . ID=id-AFQR01000043.1:27509..27617;Note=coiled-coil;gbkey=misc_feature ##sequence-region AFQR01000042.1 1 20291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000042.1 Genbank region 1 20291 . + . ID=AFQR01000042.1:1..20291;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000042.1 Genbank gene 1028 1957 . + . ID=gene-GGE_2139;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank CDS 1028 1957 . + 0 ID=cds-EGT78928.1;Parent=gene-GGE_2139;Dbxref=GeneID:1170940,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT78928.1;Name=EGT78928.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_2139;product=HTH-type transcriptional regulator metR;protein_id=EGT78928.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1040 1370 . + . ID=id-GGE_2139;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1046 1919 . + . ID=id-GGE_2139-2;Note=multi-dom%3B label: PRK15421;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1046 1202 . + . ID=id-GGE_2139-3;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1049 1280 . + . ID=id-GGE_2139-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1052 1208 . + . ID=id-GGE_2139-5;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1304 1670 . + . ID=id-GGE_2139-6;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1304 1643 . + . ID=id-GGE_2139-7;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1319 1619 . + . ID=id-GGE_2139-8;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=metR;locus_tag=GGE_2139 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1061 1130 . - . ID=id-AFQR01000042.1:1061..1130;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1064 1160 . - . ID=id-AFQR01000042.1:1064..1160;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1064 1097 . - . ID=id-AFQR01000042.1:1064..1097;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1271 1583 . - . ID=id-AFQR01000042.1:1271..1583;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 1304 1307 . - . ID=id-AFQR01000042.1:1304..1307;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 1967 2701 . + . ID=gene-GGE_2140;Name=GGE_2140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2140 GCA_000222085.2|AFQR01000042.1 Genbank CDS 1967 2701 . + 0 ID=cds-EGT78929.1;Parent=gene-GGE_2140;Dbxref=InterPro:IPR004471,InterPro:IPR011606,PFAM:PF03591,TIGRFAM:TIGR00346,NCBI_GP:EGT78929.1;Name=EGT78929.1;Note=HI_1738;Ontology_term=GO:0006810,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=transport|0006810||;locus_tag=GGE_2140;product=putative branched-chain amino acid transport%2C permease;protein_id=EGT78929.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2015 2633 . + . ID=id-GGE_2140;Dbxref=InterPro:IPR004471,TIGRFAM:TIGR00346;Note=superfamily~azlc: azaleucine resistance protein azlc~branched-chain amino acid transport%2C azlc%3B label: AzlC superfamily;gbkey=misc_feature;locus_tag=GGE_2140 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2027 2036 . + . ID=id-GGE_2140-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2140 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2045 2393 . + . ID=id-GGE_2140-3;Dbxref=InterPro:IPR011606,PFAM:PF03591;Note=azlc~branched-chain amino acid transport%2C permease;gbkey=misc_feature;locus_tag=GGE_2140 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2012 2558 . - . ID=id-AFQR01000042.1:2012..2558;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2036 2588 . - . ID=id-AFQR01000042.1:2036..2588;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2036 2405 . - . ID=id-AFQR01000042.1:2036..2405;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2036 2153 . - . ID=id-AFQR01000042.1:2036..2153;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 2698 3027 . + . ID=gene-GGE_2141;Name=GGE_2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2141 GCA_000222085.2|AFQR01000042.1 Genbank CDS 2698 3027 . + 0 ID=cds-EGT78930.1;Parent=gene-GGE_2141;Dbxref=InterPro:IPR008407,PFAM:PF05437,PIR:PIRSF003203,NCBI_GP:EGT78930.1;Name=EGT78930.1;Note=HI_1737;gbkey=CDS;locus_tag=GGE_2141;product=putative branched-chain amino acid transport%2C AzlD;protein_id=EGT78930.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2698 3025 . + . ID=id-GGE_2141;Dbxref=InterPro:IPR008407,PIR:PIRSF003203;Note=branched-chain amino acid transport protein%2C azld type~branched-chain amino acid transport%2C azld;gbkey=misc_feature;locus_tag=GGE_2141 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2704 3019 . + . ID=id-GGE_2141-2;Note=superfamily%3B label: AzlD superfamily;gbkey=misc_feature;locus_tag=GGE_2141 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2719 2989 . + . ID=id-GGE_2141-3;Dbxref=InterPro:IPR008407,PFAM:PF05437;Note=azld~branched-chain amino acid transport%2C azld;gbkey=misc_feature;locus_tag=GGE_2141 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2719 2758 . + . ID=id-GGE_2141-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2141 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2758 2965 . - . ID=id-AFQR01000042.1:2758..2965;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2767 2887 . - . ID=id-AFQR01000042.1:2767..2887;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 2767 2806 . - . ID=id-AFQR01000042.1:2767..2806;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 3464 3697 . + . ID=gene-GGE_2142;Name=GGE_2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2142 GCA_000222085.2|AFQR01000042.1 Genbank CDS 3464 3697 . + 0 ID=cds-EGT78931.1;Parent=gene-GGE_2142;Dbxref=InterPro:IPR019629,InterPro:IPR020137,PFAM:PF10688,NCBI_GP:EGT78931.1;Name=EGT78931.1;Note=HI_1736;gbkey=CDS;locus_tag=GGE_2142;product=putative Hypothetical protein family%2C inner membrane%2CYgjV;protein_id=EGT78931.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3476 3656 . + . ID=id-GGE_2142;Dbxref=InterPro:IPR020137;Note=BlastProDom:PD058023~q4qjl2_haei8_q4qjl2~uncharacterised protein family hi1736;gbkey=misc_feature;locus_tag=GGE_2142 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3479 3674 . + . ID=id-GGE_2142-2;Dbxref=InterPro:IPR019629,PFAM:PF10688;Note=imp-ygjv~uncharacterised protein family%2C inner membrane%2Cygjv;gbkey=misc_feature;locus_tag=GGE_2142 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3479 3533 . + . ID=id-GGE_2142-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2142 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3533 3575 . - . ID=id-AFQR01000042.1:3533..3575;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3737 3746 . + . ID=id-AFQR01000042.1:3737..3746;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3755 3764 . - . ID=id-AFQR01000042.1:3755..3764;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 3772 5373 . - . ID=gene-GGE_2143;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank CDS 3772 5373 . - 0 ID=cds-EGT78932.1;Parent=gene-GGE_2143;Dbxref=GeneID:166225130,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004548,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009022,PFAM:PF00009,PFAM:PF03144,TIGRFAM:TIGR00231,TIGRFAM:TIGR00503,NCBI_GP:EGT78932.1;Name=EGT78932.1;Ontology_term=GO:0006415,GO:0005737,GO:0005525,GO:0003924,GO:0016149;gbkey=CDS;gene=prfC;go_component=cytoplasm|0005737||;go_function=GTP binding|0005525||,GTPase activity|0003924||,translation release factor activity codon specific|0016149||;go_process=translational termination|0006415||;locus_tag=GGE_2143;product=Peptide chain release factor 3;protein_id=EGT78932.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3781 5278 . - . ID=id-GGE_2143;Note=HMMPanther:PTHR23115:SF85~subfamily not named~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3793 5353 . - . ID=id-GGE_2143-2;Dbxref=InterPro:IPR004548,TIGRFAM:TIGR00503;Note=prfc: peptide chain release factor~peptide chain release factor 3;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3796 5344 . - . ID=id-GGE_2143-3;Dbxref=InterPro:IPR004548;Note=HAMAP:MF_00072~rel_fac_3~peptide chain release factor 3;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3805 5341 . - . ID=id-GGE_2143-4;Note=multi-dom%3B label: prfC;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3808 4591 . - . ID=id-GGE_2143-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3808 4585 . - . ID=id-GGE_2143-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3817 4300 . - . ID=id-GGE_2143-7;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3820 4576 . - . ID=id-GGE_2143-8;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3820 4570 . - . ID=id-GGE_2143-9;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=prfC;locus_tag=GGE_2143 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3799 3979 . + . ID=id-AFQR01000042.1:3799..3979;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3802 4195 . + . ID=id-AFQR01000042.1:3802..4195;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3805 4039 . + . ID=id-AFQR01000042.1:3805..4039;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3811 5005 . + . ID=id-AFQR01000042.1:3811..5005;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3814 3829 . + . ID=id-AFQR01000042.1:3814..3829;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3820 3958 . + . ID=id-AFQR01000042.1:3820..3958;Dbxref=InterPro:IPR000795;Note=PatternScan:PS00301~efactor_gtp~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3838 4456 . + . ID=id-AFQR01000042.1:3838..4456;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3973 4726 . + . ID=id-AFQR01000042.1:3973..4726;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 3979 4981 . + . ID=id-AFQR01000042.1:3979..4981;Note=Gene3D:3.30.70.870;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 4006 4960 . + . ID=id-AFQR01000042.1:4006..4960;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 4027 4678 . + . ID=id-AFQR01000042.1:4027..4678;Note=specific~superfamily%3B label: RF3_II;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 4081 4660 . + . ID=id-AFQR01000042.1:4081..4660;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 4171 4567 . + . ID=id-AFQR01000042.1:4171..4567;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5053 5062 . + . ID=id-AFQR01000042.1:5053..5062;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5431 5440 . + . ID=id-AFQR01000042.1:5431..5440;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 5441 6322 . + . ID=gene-GGE_2144;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank CDS 5441 6322 . + 0 ID=cds-EGT78933.1;Parent=gene-GGE_2144;Dbxref=GeneID:1169593,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PFAM:PF00106,NCBI_GP:EGT78933.1;Name=EGT78933.1;Ontology_term=GO:0008152,GO:0055114,GO:0005488,GO:0003824,GO:0016491;gbkey=CDS;gene=fabI;go_function=binding|0005488||,catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_2144;product=Enoyl-acyl-carrier-protein reductase NADH;protein_id=EGT78933.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5537 6218 . + . ID=id-GGE_2144;Note=multi-dom%3B label: FabI;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5537 6191 . + . ID=id-GGE_2144-2;Note=HMMPanther:PTHR24322~family not named;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5540 6197 . + . ID=id-GGE_2144-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5549 6203 . + . ID=id-GGE_2144-4;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5552 6197 . + . ID=id-GGE_2144-5;Note=specific~superfamily%3B label: ENR_SDR;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5558 5951 . + . ID=id-GGE_2144-6;Dbxref=InterPro:IPR002198,PFAM:PF00106;Note=adh_short~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature;gene=fabI;locus_tag=GGE_2144 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5495 6074 . - . ID=id-AFQR01000042.1:5495..6074;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5495 5558 . - . ID=id-AFQR01000042.1:5495..5558;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5501 6011 . - . ID=id-AFQR01000042.1:5501..6011;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 5504 6179 . - . ID=id-AFQR01000042.1:5504..6179;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 6388 8367 . + . ID=gene-GGE_2145;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank CDS 6388 8367 . + 0 ID=cds-EGT78934.1;Parent=gene-GGE_2145;Dbxref=GeneID:81335250,InterPro:IPR001900,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR011804,InterPro:IPR012340,InterPro:IPR013223,InterPro:IPR016027,InterPro:IPR022966,PFAM:PF00575,PFAM:PF00773,PFAM:PF08206,TIGRFAM:TIGR00358,TIGRFAM:TIGR02062,NCBI_GP:EGT78934.1;Name=EGT78934.1;Ontology_term=GO:0006401,GO:0016070,GO:0003723,GO:0008859,GO:0004540;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||,exoribonuclease II activity|0008859||,ribonuclease activity|0004540||;go_process=RNA catabolic process|0006401||,RNA metabolic process|0016070||;locus_tag=GGE_2145;product=Exoribonuclease 2;protein_id=EGT78934.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6388 8362 . + . ID=id-GGE_2145;Dbxref=InterPro:IPR011804;Note=multi-dom~HAMAP:MF_01036~rnase_ii~ribonuclease ii%2C bacterial%3B label: PRK05054;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6388 8359 . + . ID=id-GGE_2145-2;Dbxref=InterPro:IPR011804,TIGRFAM:TIGR02062;Note=rnase_b: exoribonuclease ii~ribonuclease ii%2C bacterial;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6406 8347 . + . ID=id-GGE_2145-3;Dbxref=InterPro:IPR004476,TIGRFAM:TIGR00358;Note=3_prime_rnase: vacb and rnase ii family~ribonuclease ii/ribonuclease r%2C bacteria;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6460 6559 . + . ID=id-GGE_2145-4;Note=superfamily%3B label: S1_like superfamily;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6460 6556 . + . ID=id-GGE_2145-5;Dbxref=InterPro:IPR013223,PFAM:PF08206;Note=ob_rnb~ribonuclease b ob domain;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6648 6657 . + . ID=id-GGE_2145-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6799 7942 . + . ID=id-GGE_2145-7;Dbxref=InterPro:IPR011804;Note=HMMPanther:PTHR23355:SF6~ribonuclease ii~ribonuclease ii%2C bacterial~HMMPanther:PTHR23355~family not named;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6955 7417 . + . ID=id-GGE_2145-8;Dbxref=InterPro:IPR001900,PFAM:PF00773;Note=rnb~ribonuclease ii/r;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6955 7414 . + . ID=id-GGE_2145-9;Note=superfamily%3B label: RNB superfamily;gbkey=misc_feature;gene=rnb;locus_tag=GGE_2145 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6454 8005 . - . ID=id-AFQR01000042.1:6454..8005;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6454 7666 . - . ID=id-AFQR01000042.1:6454..7666;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6463 7885 . - . ID=id-AFQR01000042.1:6463..7885;Dbxref=InterPro:IPR022966;Note=PatternScan:PS01175~ribonuclease_ii~ribonuclease ii/r%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6619 8122 . - . ID=id-AFQR01000042.1:6619..8122;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6634 8110 . - . ID=id-AFQR01000042.1:6634..8110;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6637 8116 . - . ID=id-AFQR01000042.1:6637..8116;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6637 8104 . - . ID=id-AFQR01000042.1:6637..8104;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 6646 8104 . - . ID=id-AFQR01000042.1:6646..8104;Note=superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 7877 7886 . - . ID=id-AFQR01000042.1:7877..7886;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8577 8614 . + . ID=id-GeneID:1841333-2;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 8621 11263 . - . ID=gene-GGE_2146;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank CDS 8621 11263 . - 0 ID=cds-EGT78935.1;Parent=gene-GGE_2146;Dbxref=GeneID:1170144,InterPro:IPR002205,InterPro:IPR005743,InterPro:IPR006691,InterPro:IPR013757,InterPro:IPR013758,InterPro:IPR013760,InterPro:IPR020899,PFAM:PF00521,PFAM:PF03989,TIGRFAM:TIGR01063,NCBI_GP:EGT78935.1;Name=EGT78935.1;Ontology_term=GO:0006259,GO:0006265,GO:0006355,GO:0005694,GO:0005524,GO:0003677,GO:0003918,GO:0003916,GO:0003700;gbkey=CDS;gene=gyrA;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||,DNA topoisomerase activity|0003916||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=DNA metabolic process|0006259||,DNA topological change|0006265||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_2146;product=DNA gyrase subunit A;protein_id=EGT78935.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8621 10790 . - . ID=id-GGE_2146;Note=HMMPanther:PTHR10169:SF4~dna gyrase subunit a~HMMPanther:PTHR10169~dna topoisomerase/gyrase;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8639 11198 . - . ID=id-GGE_2146-2;Note=multi-dom%3B label: PRK05560;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8648 11195 . - . ID=id-GGE_2146-3;Dbxref=InterPro:IPR005743,TIGRFAM:TIGR01063;Note=gyra: dna gyrase%2C a subunit~dna gyrase%2C subunit a;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8714 10088 . - . ID=id-GGE_2146-4;Dbxref=InterPro:IPR013760;Note=superfamily:SSF56719~type ii dna topoisomerase~dna topoisomerase%2C type iia%2C central;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8714 10049 . - . ID=id-GGE_2146-5;Note=specific~superfamily%3B label: TOP4c;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8720 10034 . - . ID=id-GGE_2146-6;Dbxref=InterPro:IPR002205,PFAM:PF00521;Note=dna_topoisoiv~dna topoisomerase%2C type iia%2C subunit a/c-terminal;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8726 9170 . - . ID=id-GGE_2146-7;Dbxref=InterPro:IPR013758;Note=Gene3D:3.90.199.10~dna topoisomerase%2C type iia%2C subunit a/ c-terminal%2C alpha-beta;gbkey=misc_feature;gene=gyrA;locus_tag=GGE_2146 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8660 10028 . + . ID=id-AFQR01000042.1:8660..10028;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8666 11219 . + . ID=id-AFQR01000042.1:8666..11219;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8687 10088 . + . ID=id-AFQR01000042.1:8687..10088;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8726 10688 . + . ID=id-AFQR01000042.1:8726..10688;Note=superfamily%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8732 10685 . + . ID=id-AFQR01000042.1:8732..10685;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8756 10928 . + . ID=id-AFQR01000042.1:8756..10928;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8759 11075 . + . ID=id-AFQR01000042.1:8759..11075;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8759 10544 . + . ID=id-AFQR01000042.1:8759..10544;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8765 11072 . + . ID=id-AFQR01000042.1:8765..11072;Note=superfamily%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8765 10928 . + . ID=id-AFQR01000042.1:8765..10928;Note=superfamily%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8765 10541 . + . ID=id-AFQR01000042.1:8765..10541;Note=superfamily%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8768 10223 . + . ID=id-AFQR01000042.1:8768..10223;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8771 10223 . + . ID=id-AFQR01000042.1:8771..10223;Note=superfamily%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8777 10373 . + . ID=id-AFQR01000042.1:8777..10373;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=superfamily~dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel%3B label: DNA_gyraseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 8912 9332 . + . ID=id-AFQR01000042.1:8912..9332;Dbxref=InterPro:IPR020899;Note=Gene3D:3.30.1360.40~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 9008 9710 . + . ID=id-AFQR01000042.1:9008..9710;Dbxref=InterPro:IPR013757;Note=Gene3D:1.10.268.10~dna topoisomerase%2C type iia%2C subunit a%2C alpha-helical;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 9674 10211 . + . ID=id-AFQR01000042.1:9674..10211;Note=superfamily:SSF101904~gyra/parc c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 11321 11578 . + . ID=gene-GGE_2147;Name=GGE_2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2147 GCA_000222085.2|AFQR01000042.1 Genbank CDS 11321 11578 . + 0 ID=cds-EGT78936.1;Parent=gene-GGE_2147;Dbxref=GeneID:148825855,NCBI_GP:EGT78936.1;Name=EGT78936.1;Note=YP_001290608~CGSHiEE_04080;gbkey=CDS;locus_tag=GGE_2147;product=Hypothetical protein;protein_id=EGT78936.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank gene 11789 13552 . - . ID=gene-GGE_2148;Name=GGE_2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2148 GCA_000222085.2|AFQR01000042.1 Genbank CDS 11789 13552 . - 0 ID=cds-EGT78937.1;Parent=gene-GGE_2148;Dbxref=GeneID:24212682,InterPro:IPR003776,PFAM:PF02624,TIGRFAM:TIGR00702,NCBI_GP:EGT78937.1;Name=EGT78937.1;Note=HI_1265;gbkey=CDS;locus_tag=GGE_2148;product=UPF0142 protein;protein_id=EGT78937.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 11825 12971 . - . ID=id-GGE_2148;Dbxref=InterPro:IPR003776,TIGRFAM:TIGR00702;Note=superfamily~tigr00702: uncharacterized domain~ycao-like%3B label: YcaO superfamily;gbkey=misc_feature;locus_tag=GGE_2148 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 11966 12791 . - . ID=id-GGE_2148-2;Dbxref=InterPro:IPR003776,PFAM:PF02624;Note=ycao~ycao-like;gbkey=misc_feature;locus_tag=GGE_2148 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 11834 11972 . + . ID=id-AFQR01000042.1:11834..11972;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13572 13581 . + . ID=id-AFQR01000042.1:13572..13581;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 13688 14164 . - . ID=gene-GGE_2149;Name=GGE_2149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2149 GCA_000222085.2|AFQR01000042.1 Genbank CDS 13688 14164 . - 0 ID=cds-EGT78938.1;Parent=gene-GGE_2149;Dbxref=GeneID:145630899,NCBI_GP:EGT78938.1;Name=EGT78938.1;Note=ZP_01786676~CGSHi22421_02856;gbkey=CDS;locus_tag=GGE_2149;product=Hypothetical protein;protein_id=EGT78938.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13715 13757 . - . ID=id-GGE_2149;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2149 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13736 13997 . + . ID=id-AFQR01000042.1:13736..13997;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13736 13814 . + . ID=id-AFQR01000042.1:13736..13814;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13742 13811 . + . ID=id-AFQR01000042.1:13742..13811;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 13775 13784 . + . ID=id-AFQR01000042.1:13775..13784;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 14395 15201 . + . ID=gene-GGE_2150;Name=GGE_2150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank CDS 14395 15201 . + 0 ID=cds-EGT78939.1;Parent=gene-GGE_2150;Dbxref=GeneID:1175601,InterPro:IPR013216,PFAM:PF08241,NCBI_GP:EGT78939.1;Name=EGT78939.1;Note=HI_1273;Ontology_term=GO:0008152,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||;go_process=metabolic process|0008152||;locus_tag=GGE_2150;product=putative methyltransferase type 11;protein_id=EGT78939.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14395 15127 . + . ID=id-GGE_2150;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14449 14641 . + . ID=id-GGE_2150-2;Note=multi-dom%3B label: BioC;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14455 15064 . + . ID=id-GGE_2150-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14545 14602 . + . ID=id-GGE_2150-4;Note=HMMPanther:PTHR10108~family not named;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14581 14653 . + . ID=id-GGE_2150-5;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14584 14995 . + . ID=id-GGE_2150-6;Note=multi-dom%3B label: SmtA;gbkey=misc_feature;locus_tag=GGE_2150 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 14527 14587 . - . ID=id-AFQR01000042.1:14527..14587;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 15198 15896 . - . ID=gene-GGE_2151;Name=GGE_2151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2151 GCA_000222085.2|AFQR01000042.1 Genbank CDS 15198 15896 . - 0 ID=cds-EGT78940.1;Parent=gene-GGE_2151;Dbxref=GeneID:325577980,InterPro:IPR013216,PFAM:PF08241,NCBI_GP:EGT78940.1;Name=EGT78940.1;Note=ZP_08148174;Ontology_term=GO:0008152,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||;go_process=metabolic process|0008152||;locus_tag=GGE_2151;product=metallothionein SmtA;protein_id=EGT78940.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15240 15705 . - . ID=id-GGE_2151;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_2151 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15250 15259 . - . ID=id-GGE_2151-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2151 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15447 15561 . - . ID=id-GGE_2151-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_2151 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15456 15474 . - . ID=id-GGE_2151-4;Note=HMMPanther:PTHR10108:SF288~uncharacterized protein yafs~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;locus_tag=GGE_2151 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15366 15444 . + . ID=id-AFQR01000042.1:15366..15444;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15375 15435 . + . ID=id-AFQR01000042.1:15375..15435;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 15852 16646 . + . ID=gene-GGE_2152;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank CDS 15852 16646 . + 0 ID=cds-EGT78941.1;Parent=gene-GGE_2152;Dbxref=GeneID:2494854,InterPro:IPR001279,InterPro:IPR017782,PFAM:PF00753,TIGRFAM:TIGR03413,NCBI_GP:EGT78941.1;Name=EGT78941.1;Ontology_term=GO:0016787,GO:0004416,GO:0008270;gbkey=CDS;gene=gloB;go_function=hydrolase activity|0016787||,hydroxyacylglutathione hydrolase activity|0004416||,zinc ion binding|0008270||;locus_tag=GGE_2152;product=Hydroxyacylglutathione hydrolase;protein_id=EGT78941.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15912 16533 . + . ID=id-GGE_2152;Note=HMMPanther:PTHR11935:SF7~hydroxyacylglutathione hydrolase~HMMPanther:PTHR11935~family not named;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15930 16569 . + . ID=id-GGE_2152-2;Dbxref=InterPro:IPR017782;Note=superfamily:SSF56281~metallo-hydrolase/oxidoreductase~HAMAP:MF_01374~glyoxalase_2~hydroxyacylglutathione hydrolase;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15936 16563 . + . ID=id-GGE_2152-3;Dbxref=InterPro:IPR017782,TIGRFAM:TIGR03413;Note=superfamily~gsh_glob: hydroxyacylglutathione hydrolase~hydroxyacylglutathione hydrolase%3B label: Lactamase_B superfamily;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15945 16554 . + . ID=id-GGE_2152-4;Note=Gene3D:3.60.15.10;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 15996 16278 . + . ID=id-GGE_2152-5;Dbxref=InterPro:IPR001279,PFAM:PF00753;Note=lactamase_b~beta-lactamase-like;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16467 16476 . + . ID=id-GGE_2152-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16482 16491 . + . ID=id-GGE_2152-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=gloB;locus_tag=GGE_2152 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16666 16675 . + . ID=id-AFQR01000042.1:16666..16675;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 16696 17637 . - . ID=gene-GGE_2153;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank CDS 16696 17637 . - 0 ID=cds-EGT78942.1;Parent=gene-GGE_2153;Dbxref=GeneID:1174634,InterPro:IPR004537,InterPro:IPR014710,InterPro:IPR015392,InterPro:IPR015985,PFAM:PF03848,PFAM:PF09313,TIGRFAM:TIGR00477,NCBI_GP:EGT78942.1;Name=EGT78942.1;Ontology_term=GO:0046690,GO:0005737,GO:0008757;gbkey=CDS;gene=tehB;go_component=cytoplasm|0005737||;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||;go_process=response to tellurium ion|0046690||;locus_tag=GGE_2153;product=Tellurite resistance protein TehB;protein_id=EGT78942.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16777 17029 . - . ID=id-GGE_2153;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16780 17554 . - . ID=id-GGE_2153-2;Note=multi-dom%3B label: PRK12335;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16780 16984 . - . ID=id-GGE_2153-3;Note=superfamily%3B label: DUF1971 superfamily;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16804 16939 . - . ID=id-GGE_2153-4;Dbxref=InterPro:IPR015392,PFAM:PF09313;Note=duf1971~domain of unknown function duf1971;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16921 17410 . - . ID=id-GGE_2153-5;Dbxref=InterPro:IPR004537,TIGRFAM:TIGR00477;Note=tehb: tellurite resistance protein tehb~tellurite resistance methyltransferase%2C tehb;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 16948 17353 . - . ID=id-GGE_2153-6;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17050 17281 . - . ID=id-GGE_2153-7;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17050 17272 . - . ID=id-GGE_2153-8;Dbxref=InterPro:IPR015985,PFAM:PF03848;Note=tehb~tellurite resistance methyltransferase%2C tehb%2C core;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17065 17203 . - . ID=id-GGE_2153-9;Note=HMMPanther:PTHR10108:SF216~tellurite resistance protein tehb~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17110 17224 . - . ID=id-GGE_2153-10;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=tehB;locus_tag=GGE_2153 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17036 17045 . + . ID=id-AFQR01000042.1:17036..17045;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank gene 17669 19717 . - . ID=gene-GGE_2154;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank CDS 17669 19717 . - 0 ID=cds-EGT78943.1;Parent=gene-GGE_2154;Dbxref=GeneID:1174532,InterPro:IPR001412,InterPro:IPR002547,InterPro:IPR004495,InterPro:IPR009080,InterPro:IPR012340,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR014758,InterPro:IPR015413,InterPro:IPR016027,InterPro:IPR023458,PFAM:PF01588,PFAM:PF08264,PFAM:PF09334,TIGRFAM:TIGR00398,TIGRFAM:TIGR00399,NCBI_GP:EGT78943.1;Name=EGT78943.1;Ontology_term=GO:0006431,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004825,GO:0000166,GO:0000049;gbkey=CDS;gene=metG;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,methionine-tRNA ligase activity|0004825||,nucleotide binding|0000166||,tRNA binding|0000049||;go_process=methionyl-tRNA aminoacylation|0006431||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_2154;product=Methionyl-tRNA synthetase;protein_id=EGT78943.1;transl_table=11 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17669 19682 . - . ID=id-GGE_2154;Note=HMMPanther:PTHR11946:SF20~subfamily not named~HMMPanther:PTHR11946~family not named;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17681 18821 . - . ID=id-GGE_2154-2;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17684 19703 . - . ID=id-GGE_2154-3;Note=multi-dom%3B label: metG;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17687 19286 . - . ID=id-GGE_2154-4;Dbxref=InterPro:IPR023458;Note=HAMAP:MF_00098~met_trna_synth_type1~methionyl-trna synthetase%2C type 1;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17690 18764 . - . ID=id-GGE_2154-5;Note=specific~superfamily%3B label: MetRS_core;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17693 19250 . - . ID=id-GGE_2154-6;Dbxref=InterPro:IPR014758,TIGRFAM:TIGR00398;Note=metg: methionyl-trna synthetase~methionyl-trna synthetase;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17693 18833 . - . ID=id-GGE_2154-7;Dbxref=InterPro:IPR015413,PFAM:PF09334;Note=trna-synt_1g~aminoacyl-trna synthetase%2C class i (m);gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17699 17711 . - . ID=id-GGE_2154-8;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18215 18314 . - . ID=id-GGE_2154-9;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=metG;locus_tag=GGE_2154 GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17705 18818 . + . ID=id-AFQR01000042.1:17705..18818;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17705 18422 . + . ID=id-AFQR01000042.1:17705..18422;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17705 17939 . + . ID=id-AFQR01000042.1:17705..17939;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17705 17714 . + . ID=id-AFQR01000042.1:17705..17714;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17714 17795 . + . ID=id-AFQR01000042.1:17714..17795;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17717 18539 . + . ID=id-AFQR01000042.1:17717..18539;Dbxref=InterPro:IPR014758;Note=FPrintScan:PR01041~trnasynthmet~methionyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17735 19301 . + . ID=id-AFQR01000042.1:17735..19301;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17735 19295 . + . ID=id-AFQR01000042.1:17735..19295;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17735 18977 . + . ID=id-AFQR01000042.1:17735..18977;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17735 18746 . + . ID=id-AFQR01000042.1:17735..18746;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17774 18095 . + . ID=id-AFQR01000042.1:17774..18095;Note=superfamily:SSF57770~methionyl-trna synthetase (metrs)%2C zn-domain~Gene3D:2.20.28.20;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17951 19427 . + . ID=id-AFQR01000042.1:17951..19427;Dbxref=InterPro:IPR002547,PFAM:PF01588;Note=trna_bind~trna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17978 19409 . + . ID=id-AFQR01000042.1:17978..19409;Dbxref=InterPro:IPR002547;Note=ProfileScan:PS50886~trbd~trna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17990 19397 . + . ID=id-AFQR01000042.1:17990..19397;Note=specific~superfamily%3B label: tRNA_bindingDomain superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17990 19394 . + . ID=id-AFQR01000042.1:17990..19394;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 17999 19388 . + . ID=id-AFQR01000042.1:17999..19388;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18018 18027 . + . ID=id-AFQR01000042.1:18018..18027;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18068 18788 . + . ID=id-AFQR01000042.1:18068..18788;Note=specific~superfamily%3B label: Anticodon_Ia_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18071 18860 . + . ID=id-AFQR01000042.1:18071..18860;Note=Gene3D:1.10.730.10;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18101 19286 . + . ID=id-AFQR01000042.1:18101..19286;Dbxref=InterPro:IPR004495,TIGRFAM:TIGR00399;Note=metg_c_term: methionyl-trna synthetase%2C b~methionyl-trna synthetase%2C class ia%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18119 18911 . + . ID=id-AFQR01000042.1:18119..18911;Dbxref=InterPro:IPR013155,PFAM:PF08264;Note=anticodon_1~valyl/leucyl/isoleucyl-trna synthetase%2C class i%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000042.1 Genbank sequence_feature 18299 18824 . + . ID=id-AFQR01000042.1:18299..18824;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding;gbkey=misc_feature ##sequence-region AFQR01000041.1 1 95535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000041.1 Genbank region 1 95535 . + . ID=AFQR01000041.1:1..95535;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000041.1 Genbank gene 540 1532 . - . ID=gene-GGE_2049;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank CDS 540 1532 . - 0 ID=cds-EGT79003.1;Parent=gene-GGE_2049;Dbxref=GeneID:81337010,InterPro:IPR002052,InterPro:IPR007848,InterPro:IPR013675,InterPro:IPR023543,PFAM:PF05175,PFAM:PF08468,NCBI_GP:EGT79003.1;Name=EGT79003.1;Ontology_term=GO:0032259,GO:0006364,GO:0008168,GO:0003676,GO:0008990,GO:0008649;gbkey=CDS;gene=rsmC;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,rRNA (guanine-N2-)-methyltransferase activity|0008990||,rRNA methyltransferase activity|0008649||;go_process=methylation|0032259||,rRNA processing|0006364||;locus_tag=GGE_2049;product=Ribosomal RNA small subunit methyltransferase C;protein_id=EGT79003.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 540 1530 . - . ID=id-GGE_2049;Note=multi-dom%3B label: rsmC;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 546 1527 . - . ID=id-GGE_2049-2;Dbxref=InterPro:IPR023543;Note=HAMAP:MF_01862~16srrna_methyltr_c~rrna small subunit methyltransferase c;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 558 984 . - . ID=id-GGE_2049-3;Dbxref=InterPro:IPR013675,PFAM:PF08468;Note=superfamily~mts_n~methyltransferase small%3B label: MTS_N superfamily;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 588 1473 . - . ID=id-GGE_2049-4;Note=HMMPanther:PTHR18895:SF6~ribosomal rna small subunit methyltransferase d (rrna (guanine-n(2)-)-methyltransferase)~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 777 1248 . - . ID=id-GGE_2049-5;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 1008 1059 . - . ID=id-GGE_2049-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 1023 1041 . - . ID=id-GGE_2049-7;Dbxref=InterPro:IPR007848,PFAM:PF05175;Note=mts~methyltransferase small;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 1359 1368 . - . ID=id-GGE_2049-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rsmC;locus_tag=GGE_2049 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 561 1317 . + . ID=id-AFQR01000041.1:561..1317;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 843 1119 . + . ID=id-AFQR01000041.1:843..1119;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 1100 1109 . + . ID=id-AFQR01000041.1:1100..1109;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 1597 2214 . + . ID=gene-GGE_2050;Name=GGE_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2050 GCA_000222085.2|AFQR01000041.1 Genbank CDS 1597 2214 . + 0 ID=cds-EGT79004.1;Parent=gene-GGE_2050;Dbxref=GeneID:325578683,NCBI_GP:EGT79004.1;Name=EGT79004.1;Note=ZP_08148759~HMPREF9417_1500;gbkey=CDS;locus_tag=GGE_2050;product=Hypothetical protein;protein_id=EGT79004.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 1630 1744 . + . ID=id-GGE_2050;Note=superfamily%3B label: DUF1471 superfamily;gbkey=misc_feature;locus_tag=GGE_2050 GCA_000222085.2|AFQR01000041.1 Genbank gene 2216 2620 . + . ID=gene-GGE_2051;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank CDS 2216 2620 . + 0 ID=cds-EGT79005.1;Parent=gene-GGE_2051;Dbxref=InterPro:IPR004615,InterPro:IPR018382,PFAM:PF03603,PIR:PIRSF029225,TIGRFAM:TIGR00664,NCBI_GP:EGT79005.1;Name=EGT79005.1;Ontology_term=GO:0006260,GO:0008408,GO:0003887;gbkey=CDS;gene=holD;go_function=3'-5' exonuclease activity|0008408||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_2051;product=DNA polymerase III subunit psi;protein_id=EGT79005.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2216 2618 . + . ID=id-GGE_2051;Dbxref=InterPro:IPR004615,PIR:PIRSF029225;Note=dna polymerase iii%2C psi subunit~dna polymerase iii%2C psi subunit;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2216 2615 . + . ID=id-GGE_2051-2;Dbxref=InterPro:IPR004615,PFAM:PF03603;Note=dna_iii_psi~dna polymerase iii%2C psi subunit;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2216 2609 . + . ID=id-GGE_2051-3;Dbxref=InterPro:IPR018382,TIGRFAM:TIGR00664;Note=dna_iii_psi: dna polymerase iii%2C psi subu~dna polymerase iii%2C psi subunit%2C subgroup;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2222 2606 . + . ID=id-GGE_2051-4;Note=superfamily%3B label: DNA_III_psi superfamily;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2291 2543 . + . ID=id-GGE_2051-5;Dbxref=InterPro:IPR004615;Note=Gene3D:3.40.50.10220~dna polymerase iii%2C psi subunit;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2294 2540 . + . ID=id-GGE_2051-6;Dbxref=InterPro:IPR004615;Note=superfamily:SSF102220~dna polymerase iii psi subunit~dna polymerase iii%2C psi subunit;gbkey=misc_feature;gene=holD;locus_tag=GGE_2051 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2249 2369 . - . ID=id-AFQR01000041.1:2249..2369;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2501 2510 . - . ID=id-AFQR01000041.1:2501..2510;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 2623 3063 . + . ID=gene-GGE_2052;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank CDS 2623 3063 . + 0 ID=cds-EGT79006.1;Parent=gene-GGE_2052;Dbxref=InterPro:IPR000182,InterPro:IPR006464,InterPro:IPR016181,PFAM:PF00583,TIGRFAM:TIGR01575,NCBI_GP:EGT79006.1;Name=EGT79006.1;Ontology_term=GO:0006474,GO:0008152,GO:0008080,GO:0016407;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||,acetyltransferase activity|0016407||;go_process=N-terminal protein amino acid acetylation|0006474||,metabolic process|0008152||;locus_tag=GGE_2052;product=Ribosomal-protein-alanine acetyltransferase;protein_id=EGT79006.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2623 3061 . + . ID=id-GGE_2052;Dbxref=InterPro:IPR016181;Note=superfamily~HMMPanther:PTHR23091:SF1~ribosomal-protein-alanine acetyltransferase~HMMPanther:PTHR23091~family not named~superfamily:SSF55729~acyl-coa n-acyltransferases (nat)~acyl-coa n-acyltransferase%3B label: NAT_SF superfamily;gbkey=misc_feature;gene=rimI;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2629 3058 . + . ID=id-GGE_2052-2;Dbxref=InterPro:IPR000182;Note=ProfileScan:PS51186~gnat~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;gene=rimI;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2632 3055 . + . ID=id-GGE_2052-3;Dbxref=InterPro:IPR016181;Note=Gene3D:3.40.630.30~acyl-coa n-acyltransferase;gbkey=misc_feature;gene=rimI;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2656 3019 . + . ID=id-GGE_2052-4;Dbxref=InterPro:IPR006464,TIGRFAM:TIGR01575;Note=multi-dom~rimi: ribosomal-protein-alanine acetyltransf~ribosomal-protein-alanine acetyltransferase%3B label: rimI;gbkey=misc_feature;gene=rimI;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2764 2842 . + . ID=id-GGE_2052-5;Dbxref=InterPro:IPR000182,PFAM:PF00583;Note=acetyltransf_1~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;gene=rimI;locus_tag=GGE_2052 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 2659 2854 . - . ID=id-AFQR01000041.1:2659..2854;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 3107 4015 . - . ID=gene-GGE_2053;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank CDS 3107 4015 . - 0 ID=cds-EGT79007.1;Parent=gene-GGE_2053;Dbxref=GeneID:1169657,InterPro:IPR006452,PFAM:PF04216,PIR:PIRSF018296,TIGRFAM:TIGR01562,NCBI_GP:EGT79007.1;Name=EGT79007.1;Ontology_term=GO:0005737;gbkey=CDS;gene=fdhE;go_component=cytoplasm|0005737||;locus_tag=GGE_2053;product=Protein FdhE;protein_id=EGT79007.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3107 4013 . - . ID=id-GGE_2053;Dbxref=InterPro:IPR006452,PIR:PIRSF018296;Note=superfamily~formate dehydrogenase accessory protein fdhe~formate dehydrogenase accessory protein%3B label: PRK03564 superfamily;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3107 4010 . - . ID=id-GGE_2053-2;Note=multi-dom%3B label: FdhE;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3113 3998 . - . ID=id-GGE_2053-3;Dbxref=InterPro:IPR006452,TIGRFAM:TIGR01562;Note=fdhe: formate dehydrogenase accessory protei~formate dehydrogenase accessory protein;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3116 3998 . - . ID=id-GGE_2053-4;Dbxref=InterPro:IPR006452;Note=HAMAP:MF_00611~fdeh~formate dehydrogenase accessory protein;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3158 3950 . - . ID=id-GGE_2053-5;Dbxref=InterPro:IPR006452,PFAM:PF04216;Note=fdhe~formate dehydrogenase accessory protein;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3173 3944 . - . ID=id-GGE_2053-6;Note=superfamily:SSF144020~fdhe-like;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 3176 3941 . - . ID=id-GGE_2053-7;Note=Gene3D:3.90.1670.10;gbkey=misc_feature;gene=fdhE;locus_tag=GGE_2053 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4039 4048 . + . ID=id-AFQR01000041.1:4039..4048;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4057 4066 . - . ID=id-AFQR01000041.1:4057..4066;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 4089 4805 . - . ID=gene-GGE_2054;Name=fdxI;gbkey=Gene;gene=fdxI;gene_biotype=protein_coding;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank CDS 4089 4805 . - 0 ID=cds-EGT79008.1;Parent=gene-GGE_2054;Dbxref=GeneID:2507023,InterPro:IPR005797,InterPro:IPR006471,InterPro:IPR016174,PFAM:PF00033,TIGRFAM:TIGR01583,NCBI_GP:EGT79008.1;Name=EGT79008.1;Ontology_term=GO:0045333,GO:0022904,GO:0009326,GO:0016021,GO:0016020,GO:0009055,GO:0008863,GO:0016491;gbkey=CDS;gene=fdxI;go_component=formate dehydrogenase complex|0009326||,integral to membrane|0016021||,membrane|0016020||;go_function=electron carrier activity|0009055||,formate dehydrogenase activity|0008863||,oxidoreductase activity|0016491||;go_process=cellular respiration|0045333||,respiratory electron transport chain|0022904||;locus_tag=GGE_2054;product=Formate dehydrogenase%2C cytochrome b556 subunit;protein_id=EGT79008.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4110 4737 . - . ID=id-GGE_2054;Dbxref=InterPro:IPR016174;Note=superfamily:SSF81342~transmembrane di-heme cytochromes~di-haem cytochrome%2C transmembrane;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4116 4692 . - . ID=id-GGE_2054-2;Note=Gene3D:1.20.950.20;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4122 4695 . - . ID=id-GGE_2054-3;Dbxref=InterPro:IPR006471,TIGRFAM:TIGR01583;Note=formate-dh-gamm: formate dehydrogenas~formate dehydrogenase%2C gamma subunit;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4122 4680 . - . ID=id-GGE_2054-4;Note=superfamily%3B label: Cytochrome_b_N superfamily;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4128 4599 . - . ID=id-GGE_2054-5;Dbxref=InterPro:IPR005797,PFAM:PF00033;Note=cytochrom_b_n~cytochrome b/b6;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4152 4158 . - . ID=id-GGE_2054-6;Note=transmembrane_regions;gbkey=misc_feature;gene=fdxI;locus_tag=GGE_2054 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4131 4713 . + . ID=id-AFQR01000041.1:4131..4713;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4158 4563 . + . ID=id-AFQR01000041.1:4158..4563;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4158 4452 . + . ID=id-AFQR01000041.1:4158..4452;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4158 4263 . + . ID=id-AFQR01000041.1:4158..4263;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 4798 5736 . - . ID=gene-GGE_2055;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank CDS 4798 5736 . - 0 ID=cds-EGT79009.1;Parent=gene-GGE_2055;Dbxref=GeneID:1169660,InterPro:IPR006470,InterPro:IPR014603,InterPro:IPR015246,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF09163,PIR:PIRSF036298,TIGRFAM:TIGR01582,NCBI_GP:EGT79009.1;Name=EGT79009.1;Ontology_term=GO:0045333,GO:0016021,GO:0009055,GO:0008863,GO:0051536;gbkey=CDS;gene=fdxH;go_component=integral to membrane|0016021||;go_function=electron carrier activity|0009055||,formate dehydrogenase activity|0008863||,iron-sulfur cluster binding|0051536||;go_process=cellular respiration|0045333||;locus_tag=GGE_2055;product=Formate dehydrogenase iron-sulfur subunit;protein_id=EGT79009.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4798 5722 . - . ID=id-GGE_2055;Dbxref=InterPro:IPR014603,PIR:PIRSF036298;Note=formate dehydrogenase%2C iron-sulphur subunit~formate dehydrogenase%2C iron-sulphur subunit;gbkey=misc_feature;gene=fdxH;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4834 5674 . - . ID=id-GGE_2055-2;Note=HMMPanther:PTHR11938:SF10~molybdopterin oxidoreductase~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;gene=fdxH;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4834 5653 . - . ID=id-GGE_2055-3;Dbxref=InterPro:IPR006470,TIGRFAM:TIGR01582;Note=fdh-beta: formate dehydrogenase%2C beta subuni~formate dehydrogenase%2C beta subunit;gbkey=misc_feature;gene=fdxH;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4834 5629 . - . ID=id-GGE_2055-4;Note=multi-dom%3B label: FDH-beta;gbkey=misc_feature;gene=fdxH;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4885 5593 . - . ID=id-GGE_2055-5;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=fdxH;locus_tag=GGE_2055 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4834 5596 . + . ID=id-AFQR01000041.1:4834..5596;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4834 5215 . + . ID=id-AFQR01000041.1:4834..5215;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4840 5668 . + . ID=id-AFQR01000041.1:4840..5668;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4888 5188 . + . ID=id-AFQR01000041.1:4888..5188;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4891 4903 . + . ID=id-AFQR01000041.1:4891..4903;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4894 5290 . + . ID=id-AFQR01000041.1:4894..5290;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4897 5089 . + . ID=id-AFQR01000041.1:4897..5089;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4900 5128 . + . ID=id-AFQR01000041.1:4900..5128;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4903 5230 . + . ID=id-AFQR01000041.1:4903..5230;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4912 5554 . + . ID=id-AFQR01000041.1:4912..5554;Note=superfamily%3B label: Form-deh_trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4927 5554 . + . ID=id-AFQR01000041.1:4927..5554;Dbxref=InterPro:IPR015246,PFAM:PF09163;Note=form-deh_trans~formate dehydrogenase%2C transmembrane;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4936 5560 . + . ID=id-AFQR01000041.1:4936..5560;Note=Gene3D:1.20.5.480;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 4963 5335 . + . ID=id-AFQR01000041.1:4963..5335;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 5738 8164 . - . ID=gene-GGE_2056;Name=GGE_2056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank CDS 5738 8164 . - 0 ID=cds-EGT79010.1;Parent=gene-GGE_2056;Dbxref=InterPro:IPR006443,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,PFAM:PF00384,PFAM:PF01568,TIGRFAM:TIGR01553,NCBI_GP:EGT79010.1;Name=EGT79010.1;Note=Hypothetical formate dehydrogenase/DMSO reductase%2C domains 1-3;Ontology_term=GO:0045333,GO:0055114,GO:0005737,GO:0005488,GO:0009055,GO:0008863,GO:0030151,GO:0016491;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=binding|0005488||,electron carrier activity|0009055||,formate dehydrogenase activity|0008863||,molybdenum ion binding|0030151||,oxidoreductase activity|0016491||;go_process=cellular respiration|0045333||,oxidation-reduction process|0055114||;locus_tag=GGE_2056;product=putative formate dehydrogenase/DMSO reductase%2C domains 1-3;protein_id=EGT79010.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5738 8150 . - . ID=id-GGE_2056;Dbxref=InterPro:IPR006443,TIGRFAM:TIGR01553;Note=formate-dh-alph: formate dehydrogenas~formate dehydrogenase%2C alpha subunit%2C anaerobic;gbkey=misc_feature;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5738 8141 . - . ID=id-GGE_2056-2;Note=HMMPanther:PTHR11615:SF38~formate dehydrogenase\nitrate reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5738 7649 . - . ID=id-GGE_2056-3;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5738 6506 . - . ID=id-GGE_2056-4;Note=superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5744 6857 . - . ID=id-GGE_2056-5;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;locus_tag=GGE_2056 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5774 6389 . + . ID=id-AFQR01000041.1:5774..6389;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 5822 7880 . + . ID=id-AFQR01000041.1:5822..7880;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00932~molybdopterin_prok_3~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6074 6188 . + . ID=id-AFQR01000041.1:6074..6188;Note=Gene3D:3.40.228.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6104 7769 . + . ID=id-AFQR01000041.1:6104..7769;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6134 7760 . + . ID=id-AFQR01000041.1:6134..7760;Dbxref=InterPro:IPR009010;Note=Gene3D:2.40.40.20~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6134 7757 . + . ID=id-AFQR01000041.1:6134..7757;Note=specific~superfamily%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6326 7568 . + . ID=id-AFQR01000041.1:6326..7568;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 6698 6761 . + . ID=id-AFQR01000041.1:6698..6761;Note=superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 8213 8824 . - . ID=gene-GGE_2057;Name=GGE_2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank CDS 8213 8824 . - 0 ID=cds-EGT79011.1;Parent=gene-GGE_2057;Dbxref=InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006963,PFAM:PF04879,TIGRFAM:TIGR01409,NCBI_GP:EGT79011.1;Name=EGT79011.1;Note=Hypothetical formate dehydrogenase/DMSO reductase%2C domains 1-3;Ontology_term=GO:0009055,GO:0016491;gbkey=CDS;go_function=electron carrier activity|0009055||,oxidoreductase activity|0016491||;locus_tag=GGE_2057;product=putative formate dehydrogenase/DMSO reductase%2C domains 1-3;protein_id=EGT79011.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8213 8312 . - . ID=id-GGE_2057;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8222 8300 . - . ID=id-GGE_2057-2;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8249 8282 . - . ID=id-GGE_2057-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8315 8717 . - . ID=id-GGE_2057-4;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8324 8711 . - . ID=id-GGE_2057-5;Note=HMMPanther:PTHR11615:SF38~formate dehydrogenase\nitrate reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8348 8393 . - . ID=id-GGE_2057-6;Note=Gene3D:2.20.25.90;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8354 8678 . - . ID=id-GGE_2057-7;Note=superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8354 8411 . - . ID=id-GGE_2057-8;Dbxref=InterPro:IPR006963,PFAM:PF04879;Note=molybdop_fe4s4~molybdopterin oxidoreductase%2C fe4s4 domain;gbkey=misc_feature;locus_tag=GGE_2057 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8270 8357 . + . ID=id-AFQR01000041.1:8270..8357;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00551~molybdopterin_prok_1~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 8456 8528 . + . ID=id-AFQR01000041.1:8456..8528;Note=Gene3D:3.40.50.740;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 9100 9912 . + . ID=gene-GGE_2058;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank CDS 9100 9912 . + 0 ID=cds-EGT79012.1;Parent=gene-GGE_2058;Dbxref=InterPro:IPR003786,PFAM:PF02634,TIGRFAM:TIGR00129,NCBI_GP:EGT79012.1;Name=EGT79012.1;Ontology_term=GO:0009326,GO:0008863;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||;go_function=formate dehydrogenase activity|0008863||;locus_tag=GGE_2058;product=Protein FdhD;protein_id=EGT79012.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9121 9889 . + . ID=id-GGE_2058;Dbxref=InterPro:IPR003786;Note=HAMAP:MF_00187~fdhd~formate dehydrogenase%2C subunit fdhd;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9172 9832 . + . ID=id-GGE_2058-2;Note=superfamily%3B label: FdhD-NarQ superfamily;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9184 9829 . + . ID=id-GGE_2058-3;Dbxref=InterPro:IPR003786,TIGRFAM:TIGR00129;Note=fdhd_narq: formate dehydrogenase family acc~formate dehydrogenase%2C subunit fdhd;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9199 9811 . + . ID=id-GGE_2058-4;Dbxref=InterPro:IPR003786,PFAM:PF02634;Note=fdhd-narq~formate dehydrogenase%2C subunit fdhd;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9205 9361 . + . ID=id-GGE_2058-5;Note=Gene3D:3.10.20.10;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9502 9508 . + . ID=id-GGE_2058-6;Note=Gene3D:3.40.140.10;gbkey=misc_feature;gene=fdhD;locus_tag=GGE_2058 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9162 9171 . - . ID=id-AFQR01000041.1:9162..9171;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9502 9511 . - . ID=id-AFQR01000041.1:9502..9511;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 9949 10182 . - . ID=gene-GGE_2059;Name=GGE_2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2059 GCA_000222085.2|AFQR01000041.1 Genbank CDS 9949 10182 . - 0 ID=cds-EGT79013.1;Parent=gene-GGE_2059;Dbxref=InterPro:IPR018886,PFAM:PF10571,NCBI_GP:EGT79013.1;Name=EGT79013.1;Note=HI_1126;gbkey=CDS;locus_tag=GGE_2059;product=putative Hypothetical protein family UPF0547;protein_id=EGT79013.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9949 10177 . - . ID=id-GGE_2059;Note=BlastProDom:PD057827~y1126_haein_p44114;gbkey=misc_feature;locus_tag=GGE_2059 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9964 10024 . - . ID=id-GGE_2059-2;Note=superfamily%3B label: UPF0547 superfamily;gbkey=misc_feature;locus_tag=GGE_2059 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9967 10018 . - . ID=id-GGE_2059-3;Dbxref=InterPro:IPR018886,PFAM:PF10571;Note=upf0547~uncharacterised protein family upf0547;gbkey=misc_feature;locus_tag=GGE_2059 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 9991 10123 . + . ID=id-AFQR01000041.1:9991..10123;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10009 10117 . + . ID=id-AFQR01000041.1:10009..10117;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 10381 11967 . + . ID=gene-GGE_2060;Name=GGE_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2060 GCA_000222085.2|AFQR01000041.1 Genbank CDS 10381 11967 . + 0 ID=cds-EGT79014.1;Parent=gene-GGE_2060;Dbxref=GeneID:145637122,InterPro:IPR003706,PFAM:PF02554,NCBI_GP:EGT79014.1;Name=EGT79014.1;Note=ZP_01792785;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=cellular response to starvation|0009267||;locus_tag=GGE_2060;product=putative carbon starvation protein CstA;protein_id=EGT79014.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10381 11944 . + . ID=id-GGE_2060;Note=superfamily%3B label: CstA superfamily;gbkey=misc_feature;locus_tag=GGE_2060 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10387 11398 . + . ID=id-GGE_2060-2;Dbxref=InterPro:IPR003706,PFAM:PF02554;Note=csta~carbon starvation protein csta;gbkey=misc_feature;locus_tag=GGE_2060 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10393 10438 . + . ID=id-GGE_2060-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2060 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10423 10771 . - . ID=id-AFQR01000041.1:10423..10771;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10438 11773 . - . ID=id-AFQR01000041.1:10438..11773;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10438 11212 . - . ID=id-AFQR01000041.1:10438..11212;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10441 11695 . - . ID=id-AFQR01000041.1:10441..11695;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 11857 . - . ID=id-AFQR01000041.1:10450..11857;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 11617 . - . ID=id-AFQR01000041.1:10450..11617;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 11470 . - . ID=id-AFQR01000041.1:10450..11470;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 11326 . - . ID=id-AFQR01000041.1:10450..11326;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 11038 . - . ID=id-AFQR01000041.1:10450..11038;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 10951 . - . ID=id-AFQR01000041.1:10450..10951;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 10756 . - . ID=id-AFQR01000041.1:10450..10756;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 10627 . - . ID=id-AFQR01000041.1:10450..10627;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 10450 10546 . - . ID=id-AFQR01000041.1:10450..10546;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 12171 12626 . + . ID=gene-GGE_2061;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank CDS 12171 12626 . + 0 ID=cds-EGT79015.1;Parent=gene-GGE_2061;Dbxref=GeneID:1175482,InterPro:IPR003444,InterPro:IPR020603,PFAM:PF02381,TIGRFAM:TIGR00242,NCBI_GP:EGT79015.1;Name=EGT79015.1;gbkey=CDS;gene=mraZ;locus_tag=GGE_2061;product=Protein MraZ;protein_id=EGT79015.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12171 12624 . + . ID=id-GGE_2061;Dbxref=InterPro:IPR003444,TIGRFAM:TIGR00242;Note=tigr00242: protein mraz~mraz~HAMAP:MF_01008~mraz~mraz;gbkey=misc_feature;gene=mraZ;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12171 12621 . + . ID=id-GGE_2061-2;Note=multi-dom%3B label: TIGR00242;gbkey=misc_feature;gene=mraZ;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12171 12597 . + . ID=id-GGE_2061-3;Note=superfamily:SSF89447~abrb/maze/mraz-like;gbkey=misc_feature;gene=mraZ;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12171 12564 . + . ID=id-GGE_2061-4;Dbxref=InterPro:IPR003444;Note=BlastProDom:PD006745~mraz_haein_p45056~mraz;gbkey=misc_feature;gene=mraZ;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12171 12396 . + . ID=id-GGE_2061-5;Dbxref=InterPro:IPR020603,PFAM:PF02381;Note=superfamily~mraz~mraz domain%3B label: MraZ superfamily;gbkey=misc_feature;gene=mraZ;locus_tag=GGE_2061 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12369 12402 . - . ID=id-AFQR01000041.1:12369..12402;Note=superfamily%3B label: MraZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12372 12402 . - . ID=id-AFQR01000041.1:12372..12402;Dbxref=InterPro:IPR020603,PFAM:PF02381;Note=mraz~mraz domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 12664 13629 . + . ID=gene-GGE_2062;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank CDS 12664 13629 . + 0 ID=cds-EGT79016.1;Parent=gene-GGE_2062;Dbxref=GeneID:1175483,InterPro:IPR002903,InterPro:IPR023397,PFAM:PF01795,PIR:PIRSF004486,TIGRFAM:TIGR00006,NCBI_GP:EGT79016.1;Name=EGT79016.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmH;go_function=methyltransferase activity|0008168||;locus_tag=GGE_2062;product=Ribosomal RNA small subunit methyltransferase H;protein_id=EGT79016.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12682 13612 . + . ID=id-GGE_2062;Dbxref=InterPro:IPR002903,TIGRFAM:TIGR00006;Note=tigr00006: s-adenosyl-methyltransferase mra~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12685 13609 . + . ID=id-GGE_2062-2;Dbxref=InterPro:IPR002903,PIR:PIRSF004486;Note=s-adenosyl-l-methionine dependent methyltransferase%2C mraw type~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12688 13606 . + . ID=id-GGE_2062-3;Dbxref=InterPro:IPR002903;Note=HMMPanther:PTHR11265~family not named~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12697 13597 . + . ID=id-GGE_2062-4;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12697 13594 . + . ID=id-GGE_2062-5;Dbxref=InterPro:IPR002903,PFAM:PF01795;Note=methyltransf_5~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12700 13594 . + . ID=id-GGE_2062-6;Dbxref=InterPro:IPR002903;Note=superfamily~HAMAP:MF_01007~16srrna_methyltr_h~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=rsmH;locus_tag=GGE_2062 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12952 13342 . - . ID=id-AFQR01000041.1:12952..13342;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12982 13018 . - . ID=id-AFQR01000041.1:12982..13018;Dbxref=InterPro:IPR023397;Note=superfamily:SSF81799~putative methyltransferase tm0872%2C insert domain~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw%2C recognition domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 12991 13015 . - . ID=id-AFQR01000041.1:12991..13015;Dbxref=InterPro:IPR023397;Note=Gene3D:1.10.150.170~s-adenosyl-l-methionine-dependent methyltransferase%2C mraw%2C recognition domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 13632 13955 . + . ID=gene-GGE_2063;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=GGE_2063 GCA_000222085.2|AFQR01000041.1 Genbank CDS 13632 13955 . + 0 ID=cds-EGT79017.1;Parent=gene-GGE_2063;Dbxref=InterPro:IPR007082,InterPro:IPR011922,PFAM:PF04999,TIGRFAM:TIGR02209,NCBI_GP:EGT79017.1;Name=EGT79017.1;Ontology_term=GO:0007049,GO:0051301,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral to membrane|0016021||;go_process=cell cycle|0007049||,cell division|0051301||;locus_tag=GGE_2063;product=Cell division protein ftsL;protein_id=EGT79017.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13641 13947 . + . ID=id-GGE_2063;Note=superfamily%3B label: DivIC superfamily;gbkey=misc_feature;gene=ftsL;locus_tag=GGE_2063 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13665 13920 . + . ID=id-GGE_2063-2;Dbxref=InterPro:IPR007082,PFAM:PF04999;Note=ftsl~cell division protein ftsl;gbkey=misc_feature;gene=ftsL;locus_tag=GGE_2063 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13698 13887 . + . ID=id-GGE_2063-3;Dbxref=InterPro:IPR011922,TIGRFAM:TIGR02209;Note=ftsl_broad: cell division protein ftsl~cell division protein%2C ftsl -like;gbkey=misc_feature;gene=ftsL;locus_tag=GGE_2063 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13683 13707 . - . ID=id-AFQR01000041.1:13683..13707;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13692 13707 . - . ID=id-AFQR01000041.1:13692..13707;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 13698 13794 . - . ID=id-AFQR01000041.1:13698..13794;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 13968 15800 . + . ID=gene-GGE_2064;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank CDS 13968 15800 . + 0 ID=cds-EGT79018.1;Parent=gene-GGE_2064;Dbxref=GeneID:1172029,InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,PFAM:PF00905,PFAM:PF03717,NCBI_GP:EGT79018.1;Name=EGT79018.1;Ontology_term=GO:0009273,GO:0008658;gbkey=CDS;gene=ftsI;go_function=penicillin binding|0008658||;go_process=peptidoglycan-based cell wall biogenesis|0009273||;locus_tag=GGE_2064;product=Peptidoglycan synthase ftsI;protein_id=EGT79018.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14121 15579 . + . ID=id-GGE_2064;Note=multi-dom%3B label: PRK15105;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14205 14499 . + . ID=id-GGE_2064-2;Dbxref=InterPro:IPR005311;Note=superfamily:SSF56519~pbp_dimer~penicillin-binding protein%2C dimerization domain;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14238 14421 . + . ID=id-GGE_2064-3;Dbxref=InterPro:IPR005311,PFAM:PF03717;Note=pbp_dimer~penicillin-binding protein%2C dimerization domain;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14241 14415 . + . ID=id-GGE_2064-4;Note=superfamily%3B label: PBP_dimer superfamily;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14733 14952 . + . ID=id-GGE_2064-5;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~pbp_transp_fold~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14733 14940 . + . ID=id-GGE_2064-6;Note=Gene3D:3.40.710.10~g3dsa:3.40.710.10;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14808 14844 . + . ID=id-GGE_2064-7;Dbxref=InterPro:IPR001460,PFAM:PF00905;Note=superfamily~transpeptidase~penicillin-binding protein%2C transpeptidase%3B label: Transpeptidase superfamily;gbkey=misc_feature;gene=ftsI;locus_tag=GGE_2064 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 14262 14439 . - . ID=id-AFQR01000041.1:14262..14439;Note=Gene3D:3.90.1310.10~g3dsa:3.90.1310.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 15810 17276 . + . ID=gene-GGE_2065;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank CDS 15810 17276 . + 0 ID=cds-EGT79019.1;Parent=gene-GGE_2065;Dbxref=GeneID:1171073,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005761,InterPro:IPR013221,PFAM:PF01225,PFAM:PF02875,PFAM:PF08245,TIGRFAM:TIGR01085,NCBI_GP:EGT79019.1;Name=EGT79019.1;Ontology_term=GO:0009058,GO:0051301,GO:0009252,GO:0009273,GO:0008360,GO:0005737,GO:0005524,GO:0016881,GO:0016874;gbkey=CDS;gene=murE;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,acid-amino acid ligase activity|0016881||,ligase activity|0016874||;go_process=biosynthetic process|0009058||,cell division|0051301||,peptidoglycan biosynthetic process|0009252||,peptidoglycan-based cell wall biogenesis|0009273||,regulation of cell shape|0008360||;locus_tag=GGE_2065;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=EGT79019.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15810 17271 . + . ID=id-GGE_2065;Note=HMMPanther:PTHR23135:SF4~udp-n-acetylmuramoylalanyl-d-glutamate--2%2C6-diaminopimelate ligase~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15810 16113 . + . ID=id-GGE_2065-2;Note=superfamily:SSF63418~mure/murf n-terminal domain;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15816 17268 . + . ID=id-GGE_2065-3;Dbxref=InterPro:IPR005761;Note=HAMAP:MF_00208~mure~udp-n-acetylmuramoylalanyl-d-glutamate-2%2C6-diaminopimelate ligase;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15828 17259 . + . ID=id-GGE_2065-4;Note=multi-dom%3B label: murE;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15840 16083 . + . ID=id-GGE_2065-5;Note=Gene3D:3.40.1390.10;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15858 17229 . + . ID=id-GGE_2065-6;Dbxref=InterPro:IPR005761,TIGRFAM:TIGR01085;Note=mure: udp-n-acetylmuramyl-tripeptide synthet~udp-n-acetylmuramoylalanyl-d-glutamate-2%2C6-diaminopimelate ligase;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15864 16056 . + . ID=id-GGE_2065-7;Dbxref=InterPro:IPR000713,PFAM:PF01225;Note=superfamily~mur_ligase~mur ligase%3B label: Mur_ligase superfamily;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16116 16521 . + . ID=id-GGE_2065-8;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16116 16509 . + . ID=id-GGE_2065-9;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16143 16419 . + . ID=id-GGE_2065-10;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=mur_ligase_m~mur ligase%2C central;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16143 16416 . + . ID=id-GGE_2065-11;Note=superfamily%3B label: Mur_ligase_M superfamily;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17154 17163 . + . ID=id-GGE_2065-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=murE;locus_tag=GGE_2065 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 15821 15830 . - . ID=id-AFQR01000041.1:15821..15830;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16062 16815 . - . ID=id-AFQR01000041.1:16062..16815;Dbxref=InterPro:IPR004101,PFAM:PF02875;Note=mur_ligase_c~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16068 16815 . - . ID=id-AFQR01000041.1:16068..16815;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16239 16827 . - . ID=id-AFQR01000041.1:16239..16827;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 16269 16815 . - . ID=id-AFQR01000041.1:16269..16815;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 17290 18663 . + . ID=gene-GGE_2066;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank CDS 17290 18663 . + 0 ID=cds-EGT79020.1;Parent=gene-GGE_2066;Dbxref=GeneID:1171074,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005863,InterPro:IPR013221,PFAM:PF01225,PFAM:PF02875,PFAM:PF08245,TIGRFAM:TIGR01143,NCBI_GP:EGT79020.1;Name=EGT79020.1;Ontology_term=GO:0009058,GO:0051301,GO:0008360,GO:0005737,GO:0005524,GO:0008766,GO:0016874;gbkey=CDS;gene=murF;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,UDP-N-acetylmuramoylalanyl-D-glutamyl-2 6-diaminopimelate-D-alanyl-D-alanine ligase activity|0008766||,ligase activity|0016874||;go_process=biosynthetic process|0009058||,cell division|0051301||,regulation of cell shape|0008360||;locus_tag=GGE_2066;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=EGT79020.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17290 18661 . + . ID=id-GGE_2066;Note=multi-dom%3B label: murF;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17290 18646 . + . ID=id-GGE_2066-2;Dbxref=InterPro:IPR005863;Note=HMMPanther:PTHR23135:SF3~udp-n-acetylmuramoylalanyl-d-glutamyl-2%2C6-diaminopimelate--d-alanyl-d- alanyl ligase~udp-murnac-pentapeptide synthetase~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17290 17590 . + . ID=id-GGE_2066-3;Note=superfamily:SSF63418~mure/murf n-terminal domain;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17311 17545 . + . ID=id-GGE_2066-4;Note=Gene3D:3.40.1390.10;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17365 17503 . + . ID=id-GGE_2066-5;Dbxref=InterPro:IPR000713,PFAM:PF01225;Note=mur_ligase~mur ligase;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17374 17500 . + . ID=id-GGE_2066-6;Note=superfamily%3B label: Mur_ligase superfamily;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17380 18556 . + . ID=id-GGE_2066-7;Dbxref=InterPro:IPR005863,TIGRFAM:TIGR01143;Note=murf: udp-n-acetylmuramoyl-tripeptide--d-ala~udp-murnac-pentapeptide synthetase;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17566 17950 . + . ID=id-GGE_2066-8;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17593 17932 . + . ID=id-GGE_2066-9;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17614 17854 . + . ID=id-GGE_2066-10;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=superfamily~mur_ligase_m~mur ligase%2C central%3B label: Mur_ligase_M superfamily;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18472 18481 . + . ID=id-GGE_2066-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=murF;locus_tag=GGE_2066 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17332 17461 . - . ID=id-AFQR01000041.1:17332..17461;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17536 18235 . - . ID=id-AFQR01000041.1:17536..18235;Dbxref=InterPro:IPR004101,PFAM:PF02875;Note=mur_ligase_c~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17539 18235 . - . ID=id-AFQR01000041.1:17539..18235;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17704 18235 . - . ID=id-AFQR01000041.1:17704..18235;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 17713 18235 . - . ID=id-AFQR01000041.1:17713..18235;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 18657 19739 . + . ID=gene-GGE_2067;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank CDS 18657 19739 . + 0 ID=cds-EGT79021.1;Parent=gene-GGE_2067;Dbxref=GeneID:166220386,InterPro:IPR000715,InterPro:IPR003524,InterPro:IPR018480,PFAM:PF00953,PFAM:PF10555,TIGRFAM:TIGR00445,NCBI_GP:EGT79021.1;Name=EGT79021.1;Ontology_term=GO:0016021,GO:0016020,GO:0008963;gbkey=CDS;gene=mraY;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||;locus_tag=GGE_2067;product=Phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=EGT79021.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18705 19692 . + . ID=id-GGE_2067;Note=multi-dom%3B label: mraY;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18708 19689 . + . ID=id-GGE_2067-2;Dbxref=InterPro:IPR000715,InterPro:IPR003524;Note=HMMPanther:PTHR22926:SF3~phospho-n-acetylmuramoyl-pentapeptide-transferase~phospho-n-acetylmuramoyl-pentapeptide transferase~HMMPanther:PTHR22926~family not named~glycosyl transferase%2C family 4;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18732 19659 . + . ID=id-GGE_2067-3;Dbxref=InterPro:IPR003524;Note=HAMAP:MF_00038~mray~phospho-n-acetylmuramoyl-pentapeptide transferase;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18768 19629 . + . ID=id-GGE_2067-4;Dbxref=InterPro:IPR003524,TIGRFAM:TIGR00445;Note=mray: phospho-n-acetylmuramoyl-pentapeptide-~phospho-n-acetylmuramoyl-pentapeptide transferase;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18840 19545 . + . ID=id-GGE_2067-5;Note=specific~superfamily%3B label: GT_MraY;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18954 19215 . + . ID=id-GGE_2067-6;Dbxref=InterPro:IPR000715,PFAM:PF00953;Note=glycos_transf_4~glycosyl transferase%2C family 4;gbkey=misc_feature;gene=mraY;locus_tag=GGE_2067 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18693 19224 . - . ID=id-AFQR01000041.1:18693..19224;Dbxref=InterPro:IPR018480;Note=PatternScan:PS01348~mray_2~phospho-n-acetylmuramoyl-pentapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18696 18861 . - . ID=id-AFQR01000041.1:18696..18861;Dbxref=InterPro:IPR018480,PFAM:PF10555;Note=PatternScan:PS01347~mray_1~phospho-n-acetylmuramoyl-pentapeptide transferase%2C conserved site~mray_sig1~phospho-n-acetylmuramoyl-pentapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18708 19461 . - . ID=id-AFQR01000041.1:18708..19461;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18711 19374 . - . ID=id-AFQR01000041.1:18711..19374;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18711 19059 . - . ID=id-AFQR01000041.1:18711..19059;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18711 18948 . - . ID=id-AFQR01000041.1:18711..18948;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18717 19671 . - . ID=id-AFQR01000041.1:18717..19671;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18717 19254 . - . ID=id-AFQR01000041.1:18717..19254;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18717 18720 . - . ID=id-AFQR01000041.1:18717..18720;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18726 19521 . - . ID=id-AFQR01000041.1:18726..19521;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18726 19440 . - . ID=id-AFQR01000041.1:18726..19440;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18726 19173 . - . ID=id-AFQR01000041.1:18726..19173;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18726 18867 . - . ID=id-AFQR01000041.1:18726..18867;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 18749 18758 . - . ID=id-AFQR01000041.1:18749..18758;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 19863 21176 . + . ID=gene-GGE_2068;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank CDS 19863 21176 . + 0 ID=cds-EGT79022.1;Parent=gene-GGE_2068;Dbxref=GeneID:81174949,InterPro:IPR004101,InterPro:IPR005762,InterPro:IPR013221,InterPro:IPR016040,PFAM:PF02875,PFAM:PF08245,TIGRFAM:TIGR01087,NCBI_GP:EGT79022.1;Name=EGT79022.1;Ontology_term=GO:0009058,GO:0051301,GO:0008152,GO:0008360,GO:0005737,GO:0005524,GO:0008764,GO:0005488,GO:0003824,GO:0016874;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||,binding|0005488||,catalytic activity|0003824||,ligase activity|0016874||;go_process=biosynthetic process|0009058||,cell division|0051301||,metabolic process|0008152||,regulation of cell shape|0008360||;locus_tag=GGE_2068;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=EGT79022.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19863 21165 . + . ID=id-GGE_2068;Note=multi-dom%3B label: murD;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19869 20142 . + . ID=id-GGE_2068-2;Note=superfamily:SSF51984~murcd n-terminal domain;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19872 20133 . + . ID=id-GGE_2068-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19875 21156 . + . ID=id-GGE_2068-4;Note=HMMPanther:PTHR23135:SF2~udp-n-acetylmuramoylalanine--d-glutamate ligase~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19884 21153 . + . ID=id-GGE_2068-5;Dbxref=InterPro:IPR005762;Note=HAMAP:MF_00639~murd~udp-n-acetylmuramoylalanine-d-glutamate ligase;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19887 21147 . + . ID=id-GGE_2068-6;Dbxref=InterPro:IPR005762,TIGRFAM:TIGR01087;Note=murd: udp-n-acetylmuramoylalanine--d-glutama~udp-n-acetylmuramoylalanine-d-glutamate ligase;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20145 20481 . + . ID=id-GGE_2068-7;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20148 20472 . + . ID=id-GGE_2068-8;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20193 20376 . + . ID=id-GGE_2068-9;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=superfamily~mur_ligase_m~mur ligase%2C central%3B label: Mur_ligase_M superfamily;gbkey=misc_feature;gene=murD;locus_tag=GGE_2068 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19902 20877 . - . ID=id-AFQR01000041.1:19902..20877;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 19902 20241 . - . ID=id-AFQR01000041.1:19902..20241;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20073 20766 . - . ID=id-AFQR01000041.1:20073..20766;Dbxref=InterPro:IPR004101,PFAM:PF02875;Note=mur_ligase_c~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20079 20769 . - . ID=id-AFQR01000041.1:20079..20769;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20259 20766 . - . ID=id-AFQR01000041.1:20259..20766;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 20280 20760 . - . ID=id-AFQR01000041.1:20280..20760;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 21199 22383 . + . ID=gene-GGE_2069;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=GGE_2069 GCA_000222085.2|AFQR01000041.1 Genbank CDS 21199 22383 . + 0 ID=cds-EGT79023.1;Parent=gene-GGE_2069;Dbxref=InterPro:IPR001182,InterPro:IPR013437,InterPro:IPR018365,PFAM:PF01098,TIGRFAM:TIGR02614,NCBI_GP:EGT79023.1;Name=EGT79023.1;Ontology_term=GO:0007049,GO:0051301,GO:0009252,GO:0016021;gbkey=CDS;gene=ftsW;go_component=integral to membrane|0016021||;go_process=cell cycle|0007049||,cell division|0051301||,peptidoglycan biosynthetic process|0009252||;locus_tag=GGE_2069;product=Cell division protein ftsW;protein_id=EGT79023.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21265 22312 . + . ID=id-GGE_2069;Note=superfamily%3B label: FTSW_RODA_SPOVE superfamily;gbkey=misc_feature;gene=ftsW;locus_tag=GGE_2069 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21274 22270 . + . ID=id-GGE_2069-2;Dbxref=InterPro:IPR013437,TIGRFAM:TIGR02614;Note=ftsw: cell division protein ftsw~cell division protein ftsw;gbkey=misc_feature;gene=ftsW;locus_tag=GGE_2069 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21283 22264 . + . ID=id-GGE_2069-3;Dbxref=InterPro:IPR001182,PFAM:PF01098;Note=ftsw_roda_spove~cell cycle protein;gbkey=misc_feature;gene=ftsW;locus_tag=GGE_2069 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21244 21481 . - . ID=id-AFQR01000041.1:21244..21481;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21253 21397 . - . ID=id-AFQR01000041.1:21253..21397;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21256 21667 . - . ID=id-AFQR01000041.1:21256..21667;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 22261 . - . ID=id-AFQR01000041.1:21268..22261;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 22165 . - . ID=id-AFQR01000041.1:21268..22165;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 22060 . - . ID=id-AFQR01000041.1:21268..22060;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 21805 . - . ID=id-AFQR01000041.1:21268..21805;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 21733 . - . ID=id-AFQR01000041.1:21268..21733;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 21565 . - . ID=id-AFQR01000041.1:21268..21565;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 21469 . - . ID=id-AFQR01000041.1:21268..21469;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21268 21286 . - . ID=id-AFQR01000041.1:21268..21286;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21274 22216 . - . ID=id-AFQR01000041.1:21274..22216;Dbxref=InterPro:IPR018365;Note=PatternScan:PS00428~ftsw_roda_spove~cell cycle%2C ftsw / roda / spove%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 21280 22033 . - . ID=id-AFQR01000041.1:21280..22033;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 22395 23450 . + . ID=gene-GGE_2070;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank CDS 22395 23450 . + 0 ID=cds-EGT79024.1;Parent=gene-GGE_2070;Dbxref=InterPro:IPR004276,InterPro:IPR006009,InterPro:IPR007235,PFAM:PF03033,PFAM:PF04101,TIGRFAM:TIGR01133,NCBI_GP:EGT79024.1;Name=EGT79024.1;Ontology_term=GO:0019277,GO:0005975,GO:0030259,GO:0030246,GO:0016758,GO:0050511;gbkey=CDS;gene=murG;go_function=carbohydrate binding|0030246||,transferase activity transferring hexosyl groups|0016758||,undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||,carbohydrate metabolic process|0005975||,lipid glycosylation|0030259||;locus_tag=GGE_2070;product=putative transferase-like protein;protein_id=EGT79024.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22395 23439 . + . ID=id-GGE_2070;Note=HMMPanther:PTHR21015:SF22~subfamily not named~HMMPanther:PTHR21015~family not named;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22395 23433 . + . ID=id-GGE_2070-2;Dbxref=InterPro:IPR006009,TIGRFAM:TIGR01133;Note=murg: undecaprenyldiphospho-muramoylpentapep~n-acetylglucosaminyltransferase%2C murg;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22395 22938 . + . ID=id-GGE_2070-3;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22404 23433 . + . ID=id-GGE_2070-4;Note=multi-dom%3B label: murG;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22407 23439 . + . ID=id-GGE_2070-5;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22410 23418 . + . ID=id-GGE_2070-6;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22413 23430 . + . ID=id-GGE_2070-7;Dbxref=InterPro:IPR006009;Note=HAMAP:MF_00033~murg~n-acetylglucosaminyltransferase%2C murg;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22416 22806 . + . ID=id-GGE_2070-8;Dbxref=InterPro:IPR004276,PFAM:PF03033;Note=glyco_transf_28~glycosyl transferase%2C family 28;gbkey=misc_feature;gene=murG;locus_tag=GGE_2070 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22851 22944 . - . ID=id-AFQR01000041.1:22851..22944;Dbxref=InterPro:IPR007235,PFAM:PF04101;Note=glyco_tran_28_c~glycosyl transferase%2C family 28;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 22854 22941 . - . ID=id-AFQR01000041.1:22854..22941;Note=Gene3D:3.40.50.2000;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23489 23498 . - . ID=id-AFQR01000041.1:23489..23498;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 23547 24974 . + . ID=gene-GGE_2071;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank CDS 23547 24974 . + 0 ID=cds-EGT79025.1;Parent=gene-GGE_2071;Dbxref=GeneID:166224693,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005758,InterPro:IPR013221,InterPro:IPR016040,PFAM:PF01225,PFAM:PF02875,PFAM:PF08245,TIGRFAM:TIGR01082,NCBI_GP:EGT79025.1;Name=EGT79025.1;Ontology_term=GO:0009058,GO:0051301,GO:0008152,GO:0008360,GO:0005737,GO:0005524,GO:0008763,GO:0005488,GO:0003824,GO:0016874;gbkey=CDS;gene=murC;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,UDP-N-acetylmuramate-L-alanine ligase activity|0008763||,binding|0005488||,catalytic activity|0003824||,ligase activity|0016874||;go_process=biosynthetic process|0009058||,cell division|0051301||,metabolic process|0008152||,regulation of cell shape|0008360||;locus_tag=GGE_2071;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=EGT79025.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23547 24960 . + . ID=id-GGE_2071;Note=HMMPanther:PTHR23135:SF5~udp-n-acetylmuramate--l-alanine ligase~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23580 23835 . + . ID=id-GGE_2071-2;Note=superfamily:SSF51984~murcd n-terminal domain;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23583 24939 . + . ID=id-GGE_2071-3;Note=multi-dom%3B label: murC;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23601 24921 . + . ID=id-GGE_2071-4;Dbxref=InterPro:IPR005758;Note=HAMAP:MF_00046~murc~udp-n-acetylmuramate-alanine ligase;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23604 23811 . + . ID=id-GGE_2071-5;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23607 24900 . + . ID=id-GGE_2071-6;Dbxref=InterPro:IPR005758,TIGRFAM:TIGR01082;Note=murc: udp-n-acetylmuramate--alanine ligase~udp-n-acetylmuramate-alanine ligase;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23607 23847 . + . ID=id-GGE_2071-7;Note=superfamily%3B label: Mur_ligase superfamily;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23607 23844 . + . ID=id-GGE_2071-8;Dbxref=InterPro:IPR000713,PFAM:PF01225;Note=mur_ligase~mur ligase;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23856 24204 . + . ID=id-GGE_2071-9;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23868 24195 . + . ID=id-GGE_2071-10;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23916 24090 . + . ID=id-GGE_2071-11;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=mur_ligase_m~mur ligase%2C central;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23916 24054 . + . ID=id-GGE_2071-12;Note=superfamily%3B label: Mur_ligase_M superfamily;gbkey=misc_feature;gene=murC;locus_tag=GGE_2071 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23583 24423 . - . ID=id-AFQR01000041.1:23583..24423;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23589 23619 . - . ID=id-AFQR01000041.1:23589..23619;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23811 24522 . - . ID=id-AFQR01000041.1:23811..24522;Dbxref=InterPro:IPR004101,PFAM:PF02875;Note=mur_ligase_c~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23817 24522 . - . ID=id-AFQR01000041.1:23817..24522;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 23997 24519 . - . ID=id-AFQR01000041.1:23997..24519;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 24003 24513 . - . ID=id-AFQR01000041.1:24003..24513;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 25060 25980 . + . ID=gene-GGE_2072;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank CDS 25060 25980 . + 0 ID=cds-EGT79026.1;Parent=gene-GGE_2072;Dbxref=GeneID:166198486,InterPro:IPR000291,InterPro:IPR005905,InterPro:IPR011095,InterPro:IPR011127,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF01820,PFAM:PF07478,TIGRFAM:TIGR01205,NCBI_GP:EGT79026.1;Name=EGT79026.1;Ontology_term=GO:0009252,GO:0005618,GO:0005737,GO:0005524,GO:0008716,GO:0003824,GO:0016874;gbkey=CDS;gene=ddl;go_component=cell wall|0005618||,cytoplasm|0005737||;go_function=ATP binding|0005524||,D-alanine-D-alanine ligase activity|0008716||,catalytic activity|0003824||,ligase activity|0016874||;go_process=peptidoglycan biosynthetic process|0009252||;locus_tag=GGE_2072;product=D-alanine--D-alanine ligase;protein_id=EGT79026.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25069 25969 . + . ID=id-GGE_2072;Note=multi-dom%3B label: ddl;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25072 25348 . + . ID=id-GGE_2072-2;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25075 25309 . + . ID=id-GGE_2072-3;Dbxref=InterPro:IPR013817;Note=Gene3D:3.40.50.20~pre-atp-grasp fold;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25078 25963 . + . ID=id-GGE_2072-4;Dbxref=InterPro:IPR005905;Note=HAMAP:MF_00047~dala_dala_lig~d-alanine--d-alanine ligase;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25081 25960 . + . ID=id-GGE_2072-5;Dbxref=InterPro:IPR005905,TIGRFAM:TIGR01205;Note=d_ala_d_alatigr: d-alanine--d-alanine~d-alanine--d-alanine ligase;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25081 25954 . + . ID=id-GGE_2072-6;Note=HMMPanther:PTHR23132~family not named;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25081 25309 . + . ID=id-GGE_2072-7;Note=superfamily%3B label: Dala_Dala_lig_N superfamily;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25081 25189 . + . ID=id-GGE_2072-8;Dbxref=InterPro:IPR011127,PFAM:PF01820;Note=dala_dala_lig_n~d-alanine--d-alanine ligase;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25360 25672 . + . ID=id-GGE_2072-9;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25372 25660 . + . ID=id-GGE_2072-10;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25378 25654 . + . ID=id-GGE_2072-11;Dbxref=InterPro:IPR011095,PFAM:PF07478;Note=superfamily~dala_dala_lig_c~d-alanine--d-alanine ligase%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25549 25558 . + . ID=id-GGE_2072-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ddl;locus_tag=GGE_2072 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25096 25258 . - . ID=id-AFQR01000041.1:25096..25258;Dbxref=InterPro:IPR000291;Note=PatternScan:PS00843~dala_dala_ligase_1~d-alanine--d-alanine ligase/vana/b/c%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25147 25804 . - . ID=id-AFQR01000041.1:25147..25804;Dbxref=InterPro:IPR000291;Note=PatternScan:PS00844~dala_dala_ligase_2~d-alanine--d-alanine ligase/vana/b/c%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25171 25219 . - . ID=id-AFQR01000041.1:25171..25219;Dbxref=InterPro:IPR011127,PFAM:PF01820;Note=dala_dala_lig_n~d-alanine--d-alanine ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25273 25399 . - . ID=id-AFQR01000041.1:25273..25399;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 25423 25612 . - . ID=id-AFQR01000041.1:25423..25612;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 25980 26744 . + . ID=gene-GGE_2073;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=GGE_2073 GCA_000222085.2|AFQR01000041.1 Genbank CDS 25980 26744 . + 0 ID=cds-EGT79027.1;Parent=gene-GGE_2073;Dbxref=InterPro:IPR005548,InterPro:IPR013685,PFAM:PF03799,PFAM:PF08478,NCBI_GP:EGT79027.1;Name=EGT79027.1;gbkey=CDS;gene=ftsQ;locus_tag=GGE_2073;product=Cell division protein ftsQ;protein_id=EGT79027.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26046 26049 . + . ID=id-GGE_2073;Note=transmembrane_regions;gbkey=misc_feature;gene=ftsQ;locus_tag=GGE_2073 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26145 26190 . + . ID=id-GGE_2073-2;Dbxref=InterPro:IPR013685,PFAM:PF08478;Note=potra_1~polypeptide-transport-associated%2C ftsq-type;gbkey=misc_feature;gene=ftsQ;locus_tag=GGE_2073 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26022 26061 . - . ID=id-AFQR01000041.1:26022..26061;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26154 26181 . - . ID=id-AFQR01000041.1:26154..26181;Note=superfamily%3B label: POTRA_1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26328 26361 . - . ID=id-AFQR01000041.1:26328..26361;Dbxref=InterPro:IPR005548,PFAM:PF03799;Note=superfamily~ftsq~cell division protein ftsq%3B label: FtsQ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 26760 28037 . + . ID=gene-GGE_2074;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank CDS 26760 28037 . + 0 ID=cds-EGT79028.1;Parent=gene-GGE_2074;Dbxref=GeneID:1169751,InterPro:IPR001023,InterPro:IPR003494,InterPro:IPR020823,PFAM:PF02491,TIGRFAM:TIGR01174,NCBI_GP:EGT79028.1;Name=EGT79028.1;Ontology_term=GO:0007049,GO:0005524;gbkey=CDS;gene=ftsA;go_function=ATP binding|0005524||;go_process=cell cycle|0007049||;locus_tag=GGE_2074;product=Cell division protein ftsA;protein_id=EGT79028.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26778 28017 . + . ID=id-GGE_2074;Dbxref=InterPro:IPR001023;Note=HMMPanther:PTHR19375:SF58~cell division protein ftsa~HMMPanther:PTHR19375~family not named~heat shock protein hsp70;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26781 27333 . + . ID=id-GGE_2074-2;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26781 27141 . + . ID=id-GGE_2074-3;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26787 27894 . + . ID=id-GGE_2074-4;Dbxref=InterPro:IPR020823,TIGRFAM:TIGR01174;Note=multi-dom~ftsa: cell division protein ftsa~cell division protein family ftsa%3B label: ftsA;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26790 27321 . + . ID=id-GGE_2074-5;Note=superfamily%3B label: FtsA superfamily;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26790 27318 . + . ID=id-GGE_2074-6;Dbxref=InterPro:IPR003494,PFAM:PF02491;Note=ftsa~cell division protein ftsa domain;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28016 28025 . + . ID=id-GGE_2074-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ftsA;locus_tag=GGE_2074 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26826 26913 . - . ID=id-AFQR01000041.1:26826..26913;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26946 27657 . - . ID=id-AFQR01000041.1:26946..27657;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 26952 27465 . - . ID=id-AFQR01000041.1:26952..27465;Note=Gene3D:3.90.640.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 27237 27378 . - . ID=id-AFQR01000041.1:27237..27378;Note=superfamily%3B label: FtsA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 27294 27378 . - . ID=id-AFQR01000041.1:27294..27378;Dbxref=InterPro:IPR003494,PFAM:PF02491;Note=ftsa~cell division protein ftsa domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 27327 27354 . - . ID=id-AFQR01000041.1:27327..27354;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 28119 29381 . + . ID=gene-GGE_2075;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank CDS 28119 29381 . + 0 ID=cds-EGT79029.1;Parent=gene-GGE_2075;Dbxref=GeneID:1169767,InterPro:IPR000158,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR018316,InterPro:IPR020805,PFAM:PF00091,PFAM:PF12327,TIGRFAM:TIGR00065,NCBI_GP:EGT79029.1;Name=EGT79029.1;Ontology_term=GO:0051258,GO:0005737,GO:0043234,GO:0005525,GO:0003924;gbkey=CDS;gene=ftsZ;go_component=cytoplasm|0005737||,protein complex|0043234||;go_function=GTP binding|0005525||,GTPase activity|0003924||;go_process=protein polymerization|0051258||;locus_tag=GGE_2075;product=Cell division protein ftsZ;protein_id=EGT79029.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28119 29244 . + . ID=id-GGE_2075;Dbxref=InterPro:IPR000158,TIGRFAM:TIGR00065;Note=ftsz: cell division protein ftsz~cell division protein ftsz;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28125 28806 . + . ID=id-GGE_2075-2;Dbxref=InterPro:IPR003008;Note=superfamily:SSF52490~tubulin nucleotide-binding domain-like~tubulin/ftsz%2C gtpase domain;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28143 29301 . + . ID=id-GGE_2075-3;Note=multi-dom%3B label: PRK09330;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28170 29097 . + . ID=id-GGE_2075-4;Note=specific~superfamily%3B label: FtsZ_type1;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28176 28809 . + . ID=id-GGE_2075-5;Dbxref=InterPro:IPR003008;Note=Gene3D:3.40.50.1440~tubulin/ftsz%2C gtpase domain;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28176 28683 . + . ID=id-GGE_2075-6;Dbxref=InterPro:IPR003008,PFAM:PF00091;Note=tubulin~tubulin/ftsz%2C gtpase domain;gbkey=misc_feature;gene=ftsZ;locus_tag=GGE_2075 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28146 28182 . - . ID=id-AFQR01000041.1:28146..28182;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28158 28497 . - . ID=id-AFQR01000041.1:28158..28497;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28176 28884 . - . ID=id-AFQR01000041.1:28176..28884;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28182 28485 . - . ID=id-AFQR01000041.1:28182..28485;Dbxref=InterPro:IPR000158;Note=FPrintScan:PR00423~celldvisftsz~cell division protein ftsz;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28185 28827 . - . ID=id-AFQR01000041.1:28185..28827;Dbxref=InterPro:IPR000158;Note=FPrintScan:PR00423~celldvisftsz~cell division protein ftsz;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28185 28569 . - . ID=id-AFQR01000041.1:28185..28569;Dbxref=InterPro:IPR000158;Note=FPrintScan:PR00423~celldvisftsz~cell division protein ftsz;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28185 28482 . - . ID=id-AFQR01000041.1:28185..28482;Dbxref=InterPro:IPR020805;Note=PatternScan:PS01135~ftsz_2~cell division protein ftsz%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28188 28758 . - . ID=id-AFQR01000041.1:28188..28758;Dbxref=InterPro:IPR000158;Note=FPrintScan:PR00423~celldvisftsz~cell division protein ftsz;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28224 28323 . - . ID=id-AFQR01000041.1:28224..28323;Dbxref=InterPro:IPR020805;Note=PatternScan:PS01134~ftsz_1~cell division protein ftsz%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28416 28866 . - . ID=id-AFQR01000041.1:28416..28866;Dbxref=InterPro:IPR018316;Note=Gene3D:3.30.1330.20~tubulin/ftsz%2C 2-layer sandwich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28416 28857 . - . ID=id-AFQR01000041.1:28416..28857;Dbxref=PFAM:PF12327;Note=ftsz_c;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 28491 28803 . - . ID=id-AFQR01000041.1:28491..28803;Dbxref=InterPro:IPR008280;Note=superfamily:SSF55307~tubulin c-terminal domain-like~tubulin/ftsz;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 29425 30342 . + . ID=gene-GGE_2076;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank CDS 29425 30342 . + 0 ID=cds-EGT79030.1;Parent=gene-GGE_2076;Dbxref=GeneID:166232052,InterPro:IPR004463,InterPro:IPR011334,InterPro:IPR015870,InterPro:IPR020568,PFAM:PF03331,TIGRFAM:TIGR00325,NCBI_GP:EGT79030.1;Name=EGT79030.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||;go_process=lipid A biosynthetic process|0009245||;locus_tag=GGE_2076;product=UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase;protein_id=EGT79030.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29425 30340 . + . ID=id-GGE_2076;Dbxref=InterPro:IPR004463,TIGRFAM:TIGR00325;Note=lpxc: udp-3-o-[3-hydroxymyristoyl] n-acetylg~udp-3-o-acyl n-acetylglucosamine deacetylase;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29425 30322 . + . ID=id-GGE_2076-2;Note=superfamily%3B label: LpxC superfamily;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29431 30265 . + . ID=id-GGE_2076-3;Dbxref=InterPro:IPR004463;Note=HAMAP:MF_00388~lpxc~udp-3-o-acyl n-acetylglucosamine deacetylase;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29431 30259 . + . ID=id-GGE_2076-4;Dbxref=InterPro:IPR004463,PFAM:PF03331;Note=multi-dom~lpxc~udp-3-o-acyl n-acetylglucosamine deacetylase%3B label: LpxC;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29431 29800 . + . ID=id-GGE_2076-5;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29434 29800 . + . ID=id-GGE_2076-6;Dbxref=InterPro:IPR015870;Note=Gene3D:3.30.230.20~udp-3-o-acyl n-acetylglucosamine deacetylase;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29812 29890 . + . ID=id-GGE_2076-7;Dbxref=InterPro:IPR011334;Note=Gene3D:3.30.1700.10~udp-3-o-acyl n-acetylglucosamine deacetylase;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29827 29863 . + . ID=id-GGE_2076-8;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=lpxC;locus_tag=GGE_2076 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 29461 30028 . - . ID=id-AFQR01000041.1:29461..30028;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30425 30434 . + . ID=id-AFQR01000041.1:30425..30434;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 30467 31624 . + . ID=gene-GGE_2077;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank CDS 30467 31624 . + 0 ID=cds-EGT79031.1;Parent=gene-GGE_2077;Dbxref=GeneID:1172476,InterPro:IPR001086,InterPro:IPR002701,InterPro:IPR008242,InterPro:IPR010952,InterPro:IPR018528,InterPro:IPR020822,PFAM:PF00800,PFAM:PF01817,PIR:PIRSF001500,TIGRFAM:TIGR01797,NCBI_GP:EGT79031.1;Name=EGT79031.1;Ontology_term=GO:0009094,GO:0046417,GO:0005737,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_component=cytoplasm|0005737||;go_function=chorismate mutase activity|0004106||,prephenate dehydratase activity|0004664||;go_process=L-phenylalanine biosynthetic process|0009094||,chorismate metabolic process|0046417||;locus_tag=GGE_2077;product=P-protein;protein_id=EGT79031.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30467 31607 . + . ID=id-GGE_2077;Dbxref=InterPro:IPR008242,PIR:PIRSF001500;Note=bifunctional chorismate mutase/prephenate dehydratase (p-protein)~bifunctional p-protein%2C chorismate mutase/prephenate dehydratase~HMMPanther:PTHR21022~family not named;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30467 30743 . + . ID=id-GGE_2077-2;Dbxref=InterPro:IPR002701;Note=ProfileScan:PS51168~chorismate_mut_2~chorismate mutase;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30473 30776 . + . ID=id-GGE_2077-3;Dbxref=InterPro:IPR002701;Note=Gene3D:1.20.59.10~chorismate mutase;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30482 31607 . + . ID=id-GGE_2077-4;Note=multi-dom%3B label: pheA;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30482 30722 . + . ID=id-GGE_2077-5;Dbxref=InterPro:IPR010952,TIGRFAM:TIGR01797;Note=superfamily~cm_p_1: chorismate mutase~chorismate mutase%2C gammaproteobacteria%3B label: CM_2 superfamily;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30494 30713 . + . ID=id-GGE_2077-6;Dbxref=InterPro:IPR020822,PFAM:PF01817;Note=cm_2~chorismate mutase%2C type ii;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30503 30944 . + . ID=id-GGE_2077-7;Dbxref=InterPro:IPR020822;Note=superfamily:SSF48600~chorismate mutase ii~chorismate mutase%2C type ii;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30782 31010 . + . ID=id-GGE_2077-8;Dbxref=InterPro:IPR001086;Note=ProfileScan:PS51171~prephenate_dehydr_3~prephenate dehydratase;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30785 31013 . + . ID=id-GGE_2077-9;Dbxref=InterPro:IPR001086,PFAM:PF00800;Note=pdt~prephenate dehydratase;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30785 31010 . + . ID=id-GGE_2077-10;Note=superfamily%3B label: PDT superfamily;gbkey=misc_feature;gene=pheA;locus_tag=GGE_2077 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30491 31442 . - . ID=id-AFQR01000041.1:30491..31442;Dbxref=InterPro:IPR018528;Note=PatternScan:PS00858~prephenate_dehydr_2~prephenate dehydratase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30515 30599 . - . ID=id-AFQR01000041.1:30515..30599;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30533 30599 . - . ID=id-AFQR01000041.1:30533..30599;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30536 31250 . - . ID=id-AFQR01000041.1:30536..31250;Dbxref=InterPro:IPR018528;Note=PatternScan:PS00857~prephenate_dehydr_1~prephenate dehydratase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30707 31358 . - . ID=id-AFQR01000041.1:30707..31358;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30710 31046 . - . ID=id-AFQR01000041.1:30710..31046;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30719 31352 . - . ID=id-AFQR01000041.1:30719..31352;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30731 30782 . - . ID=id-AFQR01000041.1:30731..30782;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 30767 31307 . - . ID=id-AFQR01000041.1:30767..31307;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31625 31634 . + . ID=id-AFQR01000041.1:31625..31634;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31652 31661 . - . ID=id-AFQR01000041.1:31652..31661;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 31664 32521 . - . ID=gene-GGE_2078;Name=GGE_2078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank CDS 31664 32521 . - 0 ID=cds-EGT79032.1;Parent=gene-GGE_2078;Dbxref=GeneID:1176171,InterPro:IPR005337,PFAM:PF03668,PIR:PIRSF005052,NCBI_GP:EGT79032.1;Name=EGT79032.1;Note=HI_1146;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;locus_tag=GGE_2078;product=UPF0042 nucleotide-binding protein;protein_id=EGT79032.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31664 32519 . - . ID=id-GGE_2078;Dbxref=InterPro:IPR005337,PIR:PIRSF005052;Note=predicted p-loop kinase%2C yhbj type~atpase%2C p-loop-containing;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31664 32510 . - . ID=id-GGE_2078-2;Dbxref=InterPro:IPR005337,PFAM:PF03668;Note=superfamily~atp_bind_2~atpase%2C p-loop-containing%3B label: ATP_bind_2 superfamily;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31664 32507 . - . ID=id-GGE_2078-3;Dbxref=InterPro:IPR005337;Note=HAMAP:MF_00636~upf0042~atpase%2C p-loop-containing;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31664 32123 . - . ID=id-GGE_2078-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31664 31754 . - . ID=id-GGE_2078-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31907 31955 . - . ID=id-GGE_2078-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2078 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 31700 31856 . + . ID=id-AFQR01000041.1:31700..31856;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 32537 33031 . - . ID=gene-GGE_2079;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank CDS 32537 33031 . - 0 ID=cds-EGT79033.1;Parent=gene-GGE_2079;Dbxref=InterPro:IPR002178,InterPro:IPR006320,InterPro:IPR016152,PFAM:PF00359,TIGRFAM:TIGR01419,NCBI_GP:EGT79033.1;Name=EGT79033.1;Ontology_term=GO:0009401,GO:0006810,GO:0008982,GO:0005351,GO:0005215;gbkey=CDS;gene=ptsN;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||,sugar:hydrogen symporter activity|0005351||,transporter activity|0005215||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,transport|0006810||;locus_tag=GGE_2079;product=Nitrogen regulatory protein;protein_id=EGT79033.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 32537 32987 . - . ID=id-GGE_2079;Dbxref=InterPro:IPR002178,InterPro:IPR016152;Note=Gene3D:3.40.930.10~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2~superfamily:SSF55804~phoshotransferase/anion transport protein~phosphotransferase/anion transporter;gbkey=misc_feature;gene=ptsN;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 32543 32987 . - . ID=id-GGE_2079-2;Dbxref=InterPro:IPR006320,TIGRFAM:TIGR01419;Note=nitro_reg_iia: pts iia-like nitrogen-re~phosphotransferase system%2C iia-like nitrogen-regulatory protein ptsn;gbkey=misc_feature;gene=ptsN;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 32552 32981 . - . ID=id-GGE_2079-3;Dbxref=InterPro:IPR002178;Note=ProfileScan:PS51094~pts_eiia_type_2~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature;gene=ptsN;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 32552 32975 . - . ID=id-GGE_2079-4;Dbxref=InterPro:IPR002178,PFAM:PF00359;Note=pts_eiia_2~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature;gene=ptsN;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 32558 32966 . - . ID=id-GGE_2079-5;Note=specific~superfamily%3B label: PTS_IIA_fru;gbkey=misc_feature;gene=ptsN;locus_tag=GGE_2079 GCA_000222085.2|AFQR01000041.1 Genbank gene 33034 33759 . - . ID=gene-GGE_2080;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank CDS 33034 33759 . - 0 ID=cds-EGT79034.1;Parent=gene-GGE_2080;Dbxref=GeneID:1176170,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,PFAM:PF12399,NCBI_GP:EGT79034.1;Name=EGT79034.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=lptB;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_2080;product=Lipopolysaccharide export system ATP-binding protein LptB;protein_id=EGT79034.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33034 33757 . - . ID=id-GGE_2080;Note=multi-dom%3B label: PRK10895;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33040 33754 . - . ID=id-GGE_2080-2;Note=HMMPanther:PTHR24220:SF15~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33040 33736 . - . ID=id-GGE_2080-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33043 33751 . - . ID=id-GGE_2080-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33046 33736 . - . ID=id-GGE_2080-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33046 33733 . - . ID=id-GGE_2080-6;Note=specific~superfamily%3B label: ABC_YhbG;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33163 33406 . - . ID=id-GGE_2080-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=lptB;locus_tag=GGE_2080 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33079 33448 . + . ID=id-AFQR01000041.1:33079..33448;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33103 33676 . + . ID=id-AFQR01000041.1:33103..33676;Dbxref=PFAM:PF12399;Note=bca_abc_tp_c;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 33763 34281 . - . ID=gene-GGE_2081;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=GGE_2081 GCA_000222085.2|AFQR01000041.1 Genbank CDS 33763 34281 . - 0 ID=cds-EGT79035.1;Parent=gene-GGE_2081;Dbxref=InterPro:IPR005653,InterPro:IPR014340,PFAM:PF03968,TIGRFAM:TIGR03002,NCBI_GP:EGT79035.1;Name=EGT79035.1;Ontology_term=GO:0015920,GO:0042597,GO:0001530;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||;go_function=lipopolysaccharide binding|0001530||;go_process=lipopolysaccharide transport|0015920||;locus_tag=GGE_2081;product=Lipopolysaccharide export system protein lptA;protein_id=EGT79035.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33775 34267 . - . ID=id-GGE_2081;Note=superfamily%3B label: OstA superfamily;gbkey=misc_feature;gene=lptA;locus_tag=GGE_2081 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33787 34177 . - . ID=id-GGE_2081-2;Dbxref=InterPro:IPR005653,PFAM:PF03968;Note=osta~organic solvent tolerance-like;gbkey=misc_feature;gene=lptA;locus_tag=GGE_2081 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33832 34189 . - . ID=id-GGE_2081-3;Dbxref=InterPro:IPR014340,TIGRFAM:TIGR03002;Note=outer_yhbn_lpta: lipopolysaccharide t~lipopolysccharide assembly%2C lpta;gbkey=misc_feature;gene=lptA;locus_tag=GGE_2081 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 33832 34180 . - . ID=id-GGE_2081-4;Note=Gene3D:2.60.450.10;gbkey=misc_feature;gene=lptA;locus_tag=GGE_2081 GCA_000222085.2|AFQR01000041.1 Genbank gene 34262 34870 . - . ID=gene-GGE_2082;Name=GGE_2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2082 GCA_000222085.2|AFQR01000041.1 Genbank CDS 34262 34870 . - 0 ID=cds-EGT79036.1;Parent=gene-GGE_2082;Dbxref=GeneID:301155935,InterPro:IPR010664,PFAM:PF06835,NCBI_GP:EGT79036.1;Name=EGT79036.1;Note=CBW15405;gbkey=CDS;locus_tag=GGE_2082;product=hypothetical protein;protein_id=EGT79036.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34262 34868 . - . ID=id-GGE_2082;Note=superfamily%3B label: COG3117 superfamily;gbkey=misc_feature;locus_tag=GGE_2082 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34277 34319 . - . ID=id-GGE_2082-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2082 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34292 34829 . - . ID=id-GGE_2082-3;Note=multi-dom%3B label: DUF1239;gbkey=misc_feature;locus_tag=GGE_2082 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34295 34826 . - . ID=id-GGE_2082-4;Dbxref=InterPro:IPR010664,PFAM:PF06835;Note=duf1239~lipopolysccharide assembly%2C lptc-related;gbkey=misc_feature;locus_tag=GGE_2082 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34304 34529 . + . ID=id-AFQR01000041.1:34304..34529;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 34919 35455 . - . ID=gene-GGE_2083;Name=GGE_2083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank CDS 34919 35455 . - 0 ID=cds-EGT79037.1;Parent=gene-GGE_2083;Dbxref=GeneID:166227534,InterPro:IPR006839,InterPro:IPR023153,PFAM:PF04751,PIR:PIRSF016183,NCBI_GP:EGT79037.1;Name=EGT79037.1;Note=CGSHiGG_09420;gbkey=CDS;locus_tag=GGE_2083;product=UPF0307 protein;protein_id=EGT79037.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34919 35453 . - . ID=id-GGE_2083;Dbxref=InterPro:IPR006839,PIR:PIRSF016183;Note=uncharacterised conserved protein%2C ucp016183 type~ribosome-associated%2C yjga;gbkey=misc_feature;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34955 35414 . - . ID=id-GGE_2083-2;Dbxref=InterPro:IPR006839;Note=HAMAP:MF_00765~upf0307~ribosome-associated%2C yjga;gbkey=misc_feature;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34958 35411 . - . ID=id-GGE_2083-3;Note=superfamily%3B label: DUF615 superfamily;gbkey=misc_feature;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34973 35384 . - . ID=id-GGE_2083-4;Dbxref=InterPro:IPR006839,PFAM:PF04751;Note=duf615~ribosome-associated%2C yjga;gbkey=misc_feature;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35018 35141 . - . ID=id-GGE_2083-5;Dbxref=InterPro:IPR023153;Note=Gene3D:1.10.60.30~pspto4464-like domain;gbkey=misc_feature;locus_tag=GGE_2083 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 34985 35210 . + . ID=id-AFQR01000041.1:34985..35210;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35129 35243 . + . ID=id-AFQR01000041.1:35129..35243;Dbxref=InterPro:IPR023153;Note=Gene3D:1.10.60.30~pspto4464-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 35544 36899 . + . ID=gene-GGE_2084;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=GGE_2084 GCA_000222085.2|AFQR01000041.1 Genbank CDS 35544 36899 . + 0 ID=cds-EGT79038.1;Parent=gene-GGE_2084;Dbxref=GeneID:1172537,InterPro:IPR002510,PFAM:PF01523,NCBI_GP:EGT79038.1;Name=EGT79038.1;gbkey=CDS;gene=pmbA;locus_tag=GGE_2084;product=Protein pmbA;protein_id=EGT79038.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35544 36894 . + . ID=id-GGE_2084;Note=superfamily%3B label: PmbA_TldD superfamily;gbkey=misc_feature;gene=pmbA;locus_tag=GGE_2084 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35544 35610 . + . ID=id-GGE_2084-2;Note=coiled-coil;gbkey=misc_feature;gene=pmbA;locus_tag=GGE_2084 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35583 36861 . + . ID=id-GGE_2084-3;Note=superfamily:SSF111283~putative modulator of dna gyrase%2C pmba/tldd;gbkey=misc_feature;gene=pmbA;locus_tag=GGE_2084 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35652 36420 . + . ID=id-GGE_2084-4;Dbxref=InterPro:IPR002510,PFAM:PF01523;Note=pmba_tldd~peptidase u62%2C modulator of dna gyrase;gbkey=misc_feature;gene=pmbA;locus_tag=GGE_2084 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35564 35573 . - . ID=id-AFQR01000041.1:35564..35573;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35580 36087 . - . ID=id-AFQR01000041.1:35580..36087;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 35589 35955 . - . ID=id-AFQR01000041.1:35589..35955;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 36626 36635 . - . ID=id-AFQR01000041.1:36626..36635;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 37111 37650 . + . ID=gene-GGE_2085;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank CDS 37111 37650 . + 0 ID=cds-EGT79039.1;Parent=gene-GGE_2085;Dbxref=GeneID:1170358,InterPro:IPR000836,InterPro:IPR005904,PFAM:PF00156,TIGRFAM:TIGR01203,NCBI_GP:EGT79039.1;Name=EGT79039.1;Ontology_term=GO:0009116,GO:0006166,GO:0005737,GO:0004422;gbkey=CDS;gene=hpt;go_component=cytoplasm|0005737||;go_function=hypoxanthine phosphoribosyltransferase activity|0004422||;go_process=nucleoside metabolic process|0009116||,purine ribonucleoside salvage|0006166||;locus_tag=GGE_2085;product=Hypoxanthine phosphoribosyltransferase;protein_id=EGT79039.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37111 37639 . + . ID=id-GGE_2085;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=hpt;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37117 37642 . + . ID=id-GGE_2085-2;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=hpt;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37132 37630 . + . ID=id-GGE_2085-3;Note=HMMPanther:PTHR22573:SF9~hypoxanthine-guanine phosphoribosyltransferase~HMMPanther:PTHR22573~family not named;gbkey=misc_feature;gene=hpt;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37135 37618 . + . ID=id-GGE_2085-4;Dbxref=InterPro:IPR005904,TIGRFAM:TIGR01203;Note=superfamily~hgprtase: hypoxanthine phosphoribosyltransfe~hypoxanthine phosphoribosyl transferase%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=hpt;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37135 37480 . + . ID=id-GGE_2085-5;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=hpt;locus_tag=GGE_2085 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37664 37673 . + . ID=id-AFQR01000041.1:37664..37673;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37696 37705 . - . ID=id-AFQR01000041.1:37696..37705;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 37707 38174 . - . ID=gene-GGE_2086;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=GGE_2086 GCA_000222085.2|AFQR01000041.1 Genbank CDS 37707 38174 . - 0 ID=cds-EGT79040.1;Parent=gene-GGE_2086;Dbxref=GeneID:1171763,InterPro:IPR001989,InterPro:IPR012837,PIR:PIRSF000368,TIGRFAM:TIGR02491,NCBI_GP:EGT79040.1;Name=EGT79040.1;Ontology_term=GO:0055114,GO:0006800,GO:0005737,GO:0051539,GO:0043365,GO:0016491;gbkey=CDS;gene=nrdG;go_component=cytoplasm|0005737||;go_function=4 iron 4 sulfur cluster binding|0051539||,[formate-C-acetyltransferase]-activating enzyme activity|0043365||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,oxygen and reactive oxygen species metabolic process|0006800||;locus_tag=GGE_2086;product=Anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=EGT79040.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37707 38169 . - . ID=id-GGE_2086;Dbxref=InterPro:IPR012837,PIR:PIRSF000368;Note=anaerobic ribonucleoside-triphosphate reductase class iii%2C small subunit~ribonucleoside-triphosphate reductase activating%2C anaerobic;gbkey=misc_feature;gene=nrdG;locus_tag=GGE_2086 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37713 38166 . - . ID=id-GGE_2086-2;Dbxref=InterPro:IPR012837,TIGRFAM:TIGR02491;Note=multi-dom~nrdg: anaerobic ribonucleoside-triphosphate~ribonucleoside-triphosphate reductase activating%2C anaerobic%3B label: NrdG;gbkey=misc_feature;gene=nrdG;locus_tag=GGE_2086 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37749 37773 . - . ID=id-GGE_2086-3;Dbxref=InterPro:IPR001989;Note=PatternScan:PS01087~radical_activating~radical-activating enzyme%2C conserved site;gbkey=misc_feature;gene=nrdG;locus_tag=GGE_2086 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 37767 38040 . - . ID=id-GGE_2086-4;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=nrdG;locus_tag=GGE_2086 GCA_000222085.2|AFQR01000041.1 Genbank gene 38422 40152 . - . ID=gene-GGE_2087;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank CDS 38422 40152 . - 0 ID=cds-EGT79041.1;Parent=gene-GGE_2087;Dbxref=GeneID:1169168,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR014223,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,TIGRFAM:TIGR02868,NCBI_GP:EGT79041.1;Name=EGT79041.1;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;gene=cydC;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_2087;product=ATP-binding/permease protein CydC;protein_id=EGT79041.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38422 40150 . - . ID=id-GGE_2087;Note=multi-dom%3B label: PRK11160;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38422 40108 . - . ID=id-GGE_2087-2;Note=HMMPanther:PTHR24222:SF100~atp-binding/permease protein cydc~HMMPanther:PTHR24222~family not named;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38434 40018 . - . ID=id-GGE_2087-3;Dbxref=InterPro:IPR014223,TIGRFAM:TIGR02868;Note=cydc: thiol reductant abc exporter%2C cydc sub~abc transporter%2C cyddc cysteine exporter (cyddc-e) family%2C permease/atp-binding protein cydc;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38440 39370 . - . ID=id-GGE_2087-4;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38443 39367 . - . ID=id-GGE_2087-5;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38461 38491 . - . ID=id-GGE_2087-6;Note=transmembrane_regions;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38476 38491 . - . ID=id-GGE_2087-7;Note=seg;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38479 39292 . - . ID=id-GGE_2087-8;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38614 39094 . - . ID=id-GGE_2087-9;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=abc_membrane~abc transporter%2C transmembrane domain;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38680 38962 . - . ID=id-GGE_2087-10;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 39143 39152 . - . ID=id-GGE_2087-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cydC;locus_tag=GGE_2087 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38458 38551 . + . ID=id-AFQR01000041.1:38458..38551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38467 39853 . + . ID=id-AFQR01000041.1:38467..39853;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38476 39250 . + . ID=id-AFQR01000041.1:38476..39250;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38479 38896 . + . ID=id-AFQR01000041.1:38479..38896;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38491 39256 . + . ID=id-AFQR01000041.1:38491..39256;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38491 39145 . + . ID=id-AFQR01000041.1:38491..39145;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38491 38896 . + . ID=id-AFQR01000041.1:38491..38896;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38491 38815 . + . ID=id-AFQR01000041.1:38491..38815;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38491 38542 . + . ID=id-AFQR01000041.1:38491..38542;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 38800 39559 . + . ID=id-AFQR01000041.1:38800..39559;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 39079 39436 . + . ID=id-AFQR01000041.1:39079..39436;Note=specific~superfamily%3B label: ABCC_cytochrome_bd;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 39091 39436 . + . ID=id-AFQR01000041.1:39091..39436;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 39115 39433 . + . ID=id-AFQR01000041.1:39115..39433;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 39133 39436 . + . ID=id-AFQR01000041.1:39133..39436;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 40152 41912 . - . ID=gene-GGE_2088;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank CDS 40152 41912 . - 0 ID=cds-EGT79042.1;Parent=gene-GGE_2088;Dbxref=GeneID:1169169,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR014216,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,TIGRFAM:TIGR02857,NCBI_GP:EGT79042.1;Name=EGT79042.1;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;gene=cydD;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_2088;product=ATP-binding/permease protein CydD;protein_id=EGT79042.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40152 41907 . - . ID=id-GGE_2088;Note=multi-dom%3B label: PRK11174;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40152 41145 . - . ID=id-GGE_2088-2;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40185 41109 . - . ID=id-GGE_2088-3;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40191 41874 . - . ID=id-GGE_2088-4;Note=HMMPanther:PTHR24223:SF209~atp-binding/permease protein cydd~HMMPanther:PTHR24223~family not named;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40212 41757 . - . ID=id-GGE_2088-5;Dbxref=InterPro:IPR014216,TIGRFAM:TIGR02857;Note=cydd: thiol reductant abc exporter%2C cydd sub~abc transporter%2C cyddc cysteine exporter (cyddc-e) family%2C permease/atp-binding protein cydd;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40224 40968 . - . ID=id-GGE_2088-6;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40230 40950 . - . ID=id-GGE_2088-7;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=abc_membrane~abc transporter%2C transmembrane domain;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40236 41019 . - . ID=id-GGE_2088-8;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;gene=cydD;locus_tag=GGE_2088 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40188 41097 . + . ID=id-AFQR01000041.1:40188..41097;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40191 40596 . + . ID=id-AFQR01000041.1:40191..40596;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40197 41604 . + . ID=id-AFQR01000041.1:40197..41604;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40203 41625 . + . ID=id-AFQR01000041.1:40203..41625;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40206 40341 . + . ID=id-AFQR01000041.1:40206..40341;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40221 40890 . + . ID=id-AFQR01000041.1:40221..40890;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40221 40641 . + . ID=id-AFQR01000041.1:40221..40641;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40221 40560 . + . ID=id-AFQR01000041.1:40221..40560;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40221 40230 . + . ID=id-AFQR01000041.1:40221..40230;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40521 41322 . + . ID=id-AFQR01000041.1:40521..41322;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40785 41232 . + . ID=id-AFQR01000041.1:40785..41232;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40806 41202 . + . ID=id-AFQR01000041.1:40806..41202;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40812 41199 . + . ID=id-AFQR01000041.1:40812..41199;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 40848 41202 . + . ID=id-AFQR01000041.1:40848..41202;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 41975 42931 . - . ID=gene-GGE_2089;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank CDS 41975 42931 . - 0 ID=cds-EGT79043.1;Parent=gene-GGE_2089;Dbxref=GeneID:1174806,InterPro:IPR000103,InterPro:IPR001327,InterPro:IPR005982,InterPro:IPR008255,InterPro:IPR013027,PFAM:PF00070,PFAM:PF07992,TIGRFAM:TIGR01292,NCBI_GP:EGT79043.1;Name=EGT79043.1;Ontology_term=GO:0055114,GO:0019430,GO:0005737,GO:0050660,GO:0016491,GO:0004791;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||;go_function=flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||,thioredoxin-disulfide reductase activity|0004791||;go_process=oxidation-reduction process|0055114||,removal of superoxide radicals|0019430||;locus_tag=GGE_2089;product=Thioredoxin reductase;protein_id=EGT79043.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41975 42920 . - . ID=id-GGE_2089;Note=multi-dom~superfamily:SSF51905~fad/nad(p)-binding domain%3B label: PRK10262;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41975 42917 . - . ID=id-GGE_2089-2;Note=HMMPanther:PTHR22912:SF51~subfamily not named~HMMPanther:PTHR22912~family not named;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41990 42290 . - . ID=id-GGE_2089-3;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41996 42896 . - . ID=id-GGE_2089-4;Dbxref=InterPro:IPR005982,TIGRFAM:TIGR01292;Note=trx_reduct: thioredoxin-disulfide reductas~thioredoxin reductase;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41999 42824 . - . ID=id-GGE_2089-5;Dbxref=InterPro:IPR013027,PFAM:PF07992;Note=pyr_redox_2~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 41999 42044 . - . ID=id-GGE_2089-6;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42002 42035 . - . ID=id-GGE_2089-7;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42305 42572 . - . ID=id-GGE_2089-8;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=trxB;locus_tag=GGE_2089 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42002 42296 . + . ID=id-AFQR01000041.1:42002..42296;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42008 42161 . + . ID=id-AFQR01000041.1:42008..42161;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42011 42026 . + . ID=id-AFQR01000041.1:42011..42026;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42014 42362 . + . ID=id-AFQR01000041.1:42014..42362;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42020 42074 . + . ID=id-AFQR01000041.1:42020..42074;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42023 42098 . + . ID=id-AFQR01000041.1:42023..42098;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42026 42683 . + . ID=id-AFQR01000041.1:42026..42683;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42026 42572 . + . ID=id-AFQR01000041.1:42026..42572;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42032 42803 . + . ID=id-AFQR01000041.1:42032..42803;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42032 42419 . + . ID=id-AFQR01000041.1:42032..42419;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42032 42293 . + . ID=id-AFQR01000041.1:42032..42293;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42038 42383 . + . ID=id-AFQR01000041.1:42038..42383;Dbxref=InterPro:IPR008255;Note=PatternScan:PS00573~pyridine_redox_2~pyridine nucleotide-disulfide oxidoreductase%2C class-ii%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42041 42689 . + . ID=id-AFQR01000041.1:42041..42689;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42044 42773 . + . ID=id-AFQR01000041.1:42044..42773;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42050 42407 . + . ID=id-AFQR01000041.1:42050..42407;Dbxref=InterPro:IPR000103;Note=FPrintScan:PR00469~pndrdtaseii~pyridine nucleotide-disulfide oxidoreductase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42188 42422 . + . ID=id-AFQR01000041.1:42188..42422;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42203 42422 . + . ID=id-AFQR01000041.1:42203..42422;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 42308 42317 . + . ID=id-AFQR01000041.1:42308..42317;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 43041 43898 . - . ID=gene-GGE_2090;Name=GGE_2090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank CDS 43041 43898 . - 0 ID=cds-EGT79044.1;Parent=gene-GGE_2090;Dbxref=GeneID:309751195,InterPro:IPR005746,InterPro:IPR011990,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,PFAM:PF00085,NCBI_GP:EGT79044.1;Name=EGT79044.1;Note=ADO81179;Ontology_term=GO:0045454,GO:0006662,GO:0005488,GO:0009055,GO:0015035;gbkey=CDS;go_function=binding|0005488||,electron carrier activity|0009055||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,glycerol ether metabolic process|0006662||;locus_tag=GGE_2090;product=Thioredoxin protein YbbN;protein_id=EGT79044.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43041 43896 . - . ID=id-GGE_2090;Note=multi-dom%3B label: COG3118;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43041 43377 . - . ID=id-GGE_2090-2;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43053 43386 . - . ID=id-GGE_2090-3;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43062 43731 . - . ID=id-GGE_2090-4;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438:SF104~subfamily not named~HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43062 43380 . - . ID=id-GGE_2090-5;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43068 43338 . - . ID=id-GGE_2090-6;Dbxref=InterPro:IPR013766,PFAM:PF00085;Note=thioredoxin~thioredoxin domain;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43080 43329 . - . ID=id-GGE_2090-7;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43377 43443 . - . ID=id-GGE_2090-8;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;locus_tag=GGE_2090 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43077 43605 . + . ID=id-AFQR01000041.1:43077..43605;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43278 43401 . + . ID=id-AFQR01000041.1:43278..43401;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 43302 43638 . + . ID=id-AFQR01000041.1:43302..43638;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 43897 43980 . + . ID=gene-GGE_2091;Name=GGE_2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2091 GCA_000222085.2|AFQR01000041.1 Genbank CDS 43897 43980 . + 0 ID=cds-EGT79045.1;Parent=gene-GGE_2091;Dbxref=GeneID:145627866,NCBI_GP:EGT79045.1;Name=EGT79045.1;Note=ZP_01783667~CGSHi22121_02475;gbkey=CDS;locus_tag=GGE_2091;product=Hypothetical protein;protein_id=EGT79045.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 44395 44404 . - . ID=id-AFQR01000041.1:44395..44404;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 44945 45361 . - . ID=gene-GGE_2092;Name=GGE_2092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank CDS 44945 45361 . - 0 ID=cds-EGT79046.1;Parent=gene-GGE_2092;Dbxref=GeneID:1175557,InterPro:IPR003736,InterPro:IPR006683,PFAM:PF03061,TIGRFAM:TIGR00369,NCBI_GP:EGT79046.1;Name=EGT79046.1;Note=HI_1161;gbkey=CDS;locus_tag=GGE_2092;product=Putative esterase;protein_id=EGT79046.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 44945 45359 . - . ID=id-GGE_2092;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 44945 45356 . - . ID=id-GGE_2092-2;Note=Gene3D:3.10.129.10;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 44945 45353 . - . ID=id-GGE_2092-3;Note=HMMPanther:PTHR12418:SF10~subfamily not named~HMMPanther:PTHR12418~family not named;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45002 45296 . - . ID=id-GGE_2092-4;Dbxref=InterPro:IPR003736,TIGRFAM:TIGR00369;Note=unchar_dom_1: uncharacterized domain~phenylacetic acid degradation-related protein;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45014 45284 . - . ID=id-GGE_2092-5;Note=specific~superfamily%3B label: hot_dog superfamily;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45095 45179 . - . ID=id-GGE_2092-6;Dbxref=InterPro:IPR006683,PFAM:PF03061;Note=4hbt~thioesterase superfamily;gbkey=misc_feature;locus_tag=GGE_2092 GCA_000222085.2|AFQR01000041.1 Genbank gene 45618 45998 . - . ID=gene-GGE_2093;Name=GGE_2093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2093 GCA_000222085.2|AFQR01000041.1 Genbank CDS 45618 45998 . - 0 ID=cds-EGT79047.1;Parent=gene-GGE_2093;Dbxref=GeneID:148828318,InterPro:IPR007569,InterPro:IPR011335,PFAM:PF04480,NCBI_GP:EGT79047.1;Name=EGT79047.1;Note=YP_001293071;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_2093;product=putative restriction endonuclease%2C type II-like protein;protein_id=EGT79047.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45630 45954 . - . ID=id-GGE_2093;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;locus_tag=GGE_2093 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45639 45942 . - . ID=id-GGE_2093-2;Note=specific~superfamily%3B label: Endonuclease_DUF559;gbkey=misc_feature;locus_tag=GGE_2093 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 45639 45939 . - . ID=id-GGE_2093-3;Dbxref=InterPro:IPR007569,PFAM:PF04480;Note=duf559~domain of unknown function duf559;gbkey=misc_feature;locus_tag=GGE_2093 GCA_000222085.2|AFQR01000041.1 Genbank gene 46068 49175 . - . ID=gene-GGE_2094;Name=GGE_2094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank CDS 46068 49175 . - 0 ID=cds-EGT79048.1;Parent=gene-GGE_2094;Dbxref=GeneID:2495617,InterPro:IPR004113,InterPro:IPR006094,InterPro:IPR009051,InterPro:IPR012285,InterPro:IPR016164,InterPro:IPR016166,InterPro:IPR016167,InterPro:IPR016168,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF01565,PFAM:PF02913,NCBI_GP:EGT79048.1;Name=EGT79048.1;Note=HI_1163;Ontology_term=GO:0055114,GO:0003824,GO:0009055,GO:0050660,GO:0051536,GO:0016491;gbkey=CDS;go_function=catalytic activity|0003824||,electron carrier activity|0009055||,flavin adenine dinucleotide binding|0050660||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_2094;product=putative fAD-linked oxidase-like protein;protein_id=EGT79048.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46128 46356 . - . ID=id-GGE_2094;Dbxref=InterPro:IPR016167;Note=Gene3D:3.30.43.10~fad-binding%2C type 2%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46137 46881 . - . ID=id-GGE_2094-2;Dbxref=InterPro:IPR016166;Note=superfamily:SSF56176~fad-binding domain~fad-binding%2C type 2;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46143 47679 . - . ID=id-GGE_2094-3;Note=HMMPanther:PTHR11748:SF4~oxidoreductase~HMMPanther:PTHR11748~family not named;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46176 47625 . - . ID=id-GGE_2094-4;Note=multi-dom%3B label: GlcD;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46236 46779 . - . ID=id-GGE_2094-5;Dbxref=InterPro:IPR016166;Note=ProfileScan:PS51387~fad_pcmh~fad-binding%2C type 2;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46248 46494 . - . ID=id-GGE_2094-6;Dbxref=InterPro:IPR006094,PFAM:PF01565;Note=superfamily~fad_binding_4~fad linked oxidase%3B label: FAD_binding_4 superfamily;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46869 46938 . - . ID=id-GGE_2094-7;Dbxref=InterPro:IPR016164;Note=superfamily:SSF55103~fad-linked oxidases domain~fad-linked oxidase-like;gbkey=misc_feature;locus_tag=GGE_2094 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46104 48114 . + . ID=id-AFQR01000041.1:46104..48114;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46164 48087 . + . ID=id-AFQR01000041.1:46164..48087;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46224 48066 . + . ID=id-AFQR01000041.1:46224..48066;Dbxref=InterPro:IPR012285;Note=Gene3D:1.10.1060.10~fumarate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46245 46773 . + . ID=id-AFQR01000041.1:46245..46773;Dbxref=InterPro:IPR016168;Note=Gene3D:3.30.465.20~fad-linked oxidase%2C fad-binding%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46596 47643 . + . ID=id-AFQR01000041.1:46596..47643;Dbxref=InterPro:IPR009051;Note=superfamily:SSF46548~alpha-helical ferredoxin~alpha-helical ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 46845 46944 . + . ID=id-AFQR01000041.1:46845..46944;Dbxref=InterPro:IPR004113,PFAM:PF02913;Note=fad-oxidase_c~fad-linked oxidase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 47439 47805 . + . ID=id-AFQR01000041.1:47439..47805;Note=multi-dom%3B label: GlpC;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 48037 48046 . + . ID=id-AFQR01000041.1:48037..48046;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 49530 50612 . + . ID=gene-GGE_2095;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank CDS 49530 50612 . + 0 ID=cds-EGT79049.1;Parent=gene-GGE_2095;Dbxref=InterPro:IPR000498,InterPro:IPR002368,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,InterPro:IPR011250,PFAM:PF00691,PFAM:PF01389,NCBI_GP:EGT79049.1;Name=EGT79049.1;Ontology_term=GO:0009279,GO:0016021,GO:0005198;gbkey=CDS;gene=ompA;go_component=cell outer membrane|0009279||,integral to membrane|0016021||;go_function=structural molecule activity|0005198||;locus_tag=GGE_2095;product=Outer membrane protein P5;protein_id=EGT79049.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49530 50612 . + . ID=id-GGE_2095;Note=VFDB hit~VFDB:VFG0335;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49530 50610 . + . ID=id-GGE_2095-2;Note=multi-dom%3B label: PRK10808;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49542 49587 . + . ID=id-GGE_2095-3;Note=seg;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49548 50187 . + . ID=id-GGE_2095-4;Dbxref=InterPro:IPR000498,PFAM:PF01389;Note=ompa_membrane~outer membrane protein%2C ompa-like%2C transmembrane domain;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49596 50148 . + . ID=id-GGE_2095-5;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49596 50133 . + . ID=id-GGE_2095-6;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49599 50130 . + . ID=id-GGE_2095-7;Note=superfamily%3B label: Surface_Ag_2 superfamily;gbkey=misc_feature;gene=ompA;locus_tag=GGE_2095 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49563 50205 . - . ID=id-AFQR01000041.1:49563..50205;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49572 50535 . - . ID=id-AFQR01000041.1:49572..50535;Dbxref=InterPro:IPR002368;Note=FPrintScan:PR01022~outrmmbranea~outer membrane protein%2C ompa;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49578 50361 . - . ID=id-AFQR01000041.1:49578..50361;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49578 50235 . - . ID=id-AFQR01000041.1:49578..50235;Dbxref=InterPro:IPR002368;Note=FPrintScan:PR01022~outrmmbranea~outer membrane protein%2C ompa;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49581 50406 . - . ID=id-AFQR01000041.1:49581..50406;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49581 49899 . - . ID=id-AFQR01000041.1:49581..49899;Dbxref=InterPro:IPR002368;Note=FPrintScan:PR01022~outrmmbranea~outer membrane protein%2C ompa;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49590 50433 . - . ID=id-AFQR01000041.1:49590..50433;Dbxref=InterPro:IPR002368;Note=FPrintScan:PR01022~outrmmbranea~outer membrane protein%2C ompa;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49599 50271 . - . ID=id-AFQR01000041.1:49599..50271;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49665 50367 . - . ID=id-AFQR01000041.1:49665..50367;Dbxref=InterPro:IPR006690;Note=PatternScan:PS01068~ompa_1~outer membrane protein%2C ompa-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49809 50268 . - . ID=id-AFQR01000041.1:49809..50268;Dbxref=InterPro:IPR006665,PFAM:PF00691;Note=ompa~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49869 50262 . - . ID=id-AFQR01000041.1:49869..50262;Note=specific~superfamily%3B label: OmpA_C-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49902 50229 . - . ID=id-AFQR01000041.1:49902..50229;Dbxref=InterPro:IPR006665;Note=Gene3D:3.30.1330.60~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49905 50226 . - . ID=id-AFQR01000041.1:49905..50226;Dbxref=InterPro:IPR006665;Note=superfamily:SSF103088~ompa-like~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 49911 50232 . - . ID=id-AFQR01000041.1:49911..50232;Dbxref=InterPro:IPR006665;Note=ProfileScan:PS51123~ompa_2~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 50763 51086 . + . ID=gene-GGE_2096;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank CDS 50763 51086 . + 0 ID=cds-EGT79050.1;Parent=gene-GGE_2096;Dbxref=GeneID:152032495,InterPro:IPR002109,InterPro:IPR004480,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014434,PFAM:PF00462,PIR:PIRSF005894,TIGRFAM:TIGR00365,NCBI_GP:EGT79050.1;Name=EGT79050.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;gene=grxD;go_function=electron carrier activity|0009055||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_2096;product=Glutaredoxin-4;protein_id=EGT79050.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50763 51084 . + . ID=id-GGE_2096;Dbxref=InterPro:IPR004480,InterPro:IPR014434,PIR:PIRSF005894;Note=monothiol glutaredoxin~monothiol glutaredoxin~HMMPanther:PTHR10293~glutaredoxin-related protein~monothiol glutaredoxin-related;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50763 51075 . + . ID=id-GGE_2096-2;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50772 51060 . + . ID=id-GGE_2096-3;Dbxref=InterPro:IPR004480,TIGRFAM:TIGR00365;Note=tigr00365: monothiol glutaredoxin%2C grx4 fam~monothiol glutaredoxin-related;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50775 51072 . + . ID=id-GGE_2096-4;Dbxref=InterPro:IPR002109;Note=ProfileScan:PS51354~glutaredoxin_2~glutaredoxin;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50775 51063 . + . ID=id-GGE_2096-5;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50784 51033 . + . ID=id-GGE_2096-6;Note=specific~superfamily%3B label: GRX_PICOT_like;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 50811 50958 . + . ID=id-GGE_2096-7;Dbxref=InterPro:IPR002109,PFAM:PF00462;Note=glutaredoxin~glutaredoxin;gbkey=misc_feature;gene=grxD;locus_tag=GGE_2096 GCA_000222085.2|AFQR01000041.1 Genbank gene 51161 52261 . - . ID=gene-GGE_2097;Name=GGE_2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank CDS 51161 52261 . - 0 ID=cds-EGT79051.1;Parent=gene-GGE_2097;Dbxref=GeneID:81335857,InterPro:IPR001917,InterPro:IPR004839,InterPro:IPR005861,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,TIGRFAM:TIGR01141,NCBI_GP:EGT79051.1;Name=EGT79051.1;Note=hisC2;Ontology_term=GO:0009058,GO:0000105,GO:0008152,GO:0003824,GO:0004400,GO:0030170,GO:0016769,GO:0016740;gbkey=CDS;go_function=catalytic activity|0003824||,histidinol-phosphate transaminase activity|0004400||,pyridoxal phosphate binding|0030170||,transferase activity transferring nitrogenous groups|0016769||,transferase activity|0016740||;go_process=biosynthetic process|0009058||,histidine biosynthetic process|0000105||,metabolic process|0008152||;locus_tag=GGE_2097;product=Histidinol-phosphate aminotransferase 2;protein_id=EGT79051.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51161 52253 . - . ID=id-GGE_2097;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51173 52244 . - . ID=id-GGE_2097-2;Note=HMMPanther:PTHR11751:SF3~histidinol-phosphate aminotransferase~HMMPanther:PTHR11751~family not named;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51179 52235 . - . ID=id-GGE_2097-3;Dbxref=InterPro:IPR005861;Note=HAMAP:MF_01023~hisc_aminotrans_2~histidinol-phosphate aminotransferase;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51185 52226 . - . ID=id-GGE_2097-4;Dbxref=InterPro:IPR005861,TIGRFAM:TIGR01141;Note=hisc: histidinol-phosphate transaminase~histidinol-phosphate aminotransferase;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51185 52217 . - . ID=id-GGE_2097-5;Note=multi-dom%3B label: hisC;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51260 52127 . - . ID=id-GGE_2097-6;Dbxref=InterPro:IPR004839,PFAM:PF00155;Note=aminotran_1_2~aminotransferase%2C class i/classii;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51269 52139 . - . ID=id-GGE_2097-7;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51305 51797 . - . ID=id-GGE_2097-8;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_2097 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51183 51192 . + . ID=id-AFQR01000041.1:51183..51192;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51191 51830 . + . ID=id-AFQR01000041.1:51191..51830;Dbxref=InterPro:IPR001917;Note=PatternScan:PS00599~aa_transfer_class_2~aminotransferase%2C class-ii%2C pyridoxal-phosphate binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51476 51941 . + . ID=id-AFQR01000041.1:51476..51941;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 51804 51813 . + . ID=id-AFQR01000041.1:51804..51813;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52363 52777 . - . ID=id-AFQR01000041.1:52363..52777;Note=HMMPanther:PTHR21152:SF1~phosphoserine aminotransferase~HMMPanther:PTHR21152~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52363 52468 . - . ID=id-AFQR01000041.1:52363..52468;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52369 52771 . - . ID=id-AFQR01000041.1:52369..52771;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52372 52759 . - . ID=id-AFQR01000041.1:52372..52759;Note=superfamily%3B label: AAT_I superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52372 52735 . - . ID=id-AFQR01000041.1:52372..52735;Dbxref=InterPro:IPR000192,PFAM:PF00266;Note=aminotran_5~aminotransferase%2C class v/cysteine desulfurase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52483 52657 . - . ID=id-AFQR01000041.1:52483..52657;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 52748 53440 . - . ID=gene-GGE_2098;Name=GGE_2098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank CDS 52748 53440 . - 0 ID=cds-EGT79052.1;Parent=gene-GGE_2098;Dbxref=InterPro:IPR000192,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR020578,PFAM:PF00266,NCBI_GP:EGT79052.1;Name=EGT79052.1;Note=Hypothetical aminotransferase%2C class V/Cysteine desulfurase;Ontology_term=GO:0008152,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=metabolic process|0008152||;locus_tag=GGE_2098;product=putative aminotransferase%2C class V/Cysteine desulfurase;protein_id=EGT79052.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52748 53426 . - . ID=id-GGE_2098;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52757 53417 . - . ID=id-GGE_2098-2;Note=HMMPanther:PTHR21152:SF1~phosphoserine aminotransferase~HMMPanther:PTHR21152~family not named;gbkey=misc_feature;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52760 53390 . - . ID=id-GGE_2098-3;Dbxref=InterPro:IPR000192,PFAM:PF00266;Note=aminotran_5~aminotransferase%2C class v/cysteine desulfurase;gbkey=misc_feature;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52763 53411 . - . ID=id-GGE_2098-4;Note=superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52799 53378 . - . ID=id-GGE_2098-5;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_2098 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 52808 53309 . + . ID=id-AFQR01000041.1:52808..53309;Dbxref=InterPro:IPR020578;Note=PatternScan:PS00595~aa_transfer_class_5~aminotransferase class-v pyridoxal-phosphate binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 53627 53971 . + . ID=gene-GGE_2099;Name=GGE_2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank CDS 53627 53971 . + 0 ID=cds-EGT79053.1;Parent=gene-GGE_2099;Dbxref=InterPro:IPR007458,PFAM:PF04363,PIR:PIRSF028773,NCBI_GP:EGT79053.1;Name=EGT79053.1;Note=NTHI1336;gbkey=CDS;locus_tag=GGE_2099;product=UPF0265 protein;protein_id=EGT79053.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 53627 53963 . + . ID=id-GGE_2099;Dbxref=InterPro:IPR007458,PIR:PIRSF028773;Note=uncharacterised conserved protein%2C ucp028773 type~protein of unknown function duf496;gbkey=misc_feature;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 53633 53939 . + . ID=id-GGE_2099-2;Note=superfamily%3B label: DUF496 superfamily;gbkey=misc_feature;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 53654 53912 . + . ID=id-GGE_2099-3;Dbxref=InterPro:IPR007458,PFAM:PF04363;Note=HAMAP:MF_00683~upf0265~protein of unknown function duf496~duf496~protein of unknown function duf496;gbkey=misc_feature;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 53663 53906 . + . ID=id-GGE_2099-4;Dbxref=InterPro:IPR007458;Note=BlastProDom:PD030876~q4qlc9_haei8_q4qlc9~protein of unknown function duf496;gbkey=misc_feature;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 53693 53693 . + . ID=id-GGE_2099-5;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_2099 GCA_000222085.2|AFQR01000041.1 Genbank gene 54010 54576 . - . ID=gene-GGE_2100;Name=GGE_2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank CDS 54010 54576 . - 0 ID=cds-EGT79054.1;Parent=gene-GGE_2100;Dbxref=GeneID:1175538,InterPro:IPR001544,PFAM:PF01063,NCBI_GP:EGT79054.1;Name=EGT79054.1;Note=HI_1169;Ontology_term=GO:0008152,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_2100;product=putative aminotransferase%2C class IV;protein_id=EGT79054.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54010 54247 . - . ID=id-GGE_2100;Note=Gene3D:3.30.470.10;gbkey=misc_feature;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54016 54571 . - . ID=id-GGE_2100-2;Dbxref=InterPro:IPR001544;Note=superfamily:SSF56752~d-aminoacid aminotransferase-like plp-dependent enzyme~aminotransferase%2C class iv;gbkey=misc_feature;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54040 54538 . - . ID=id-GGE_2100-3;Dbxref=InterPro:IPR001544;Note=HMMPanther:PTHR11825:SF17~putative para-aminobenzoate synthase component i~HMMPanther:PTHR11825~family not named~aminotransferase%2C class iv;gbkey=misc_feature;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54259 54322 . - . ID=id-GGE_2100-4;Note=Gene3D:3.20.10.10;gbkey=misc_feature;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54463 54472 . - . ID=id-GGE_2100-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2100 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54250 54328 . + . ID=id-AFQR01000041.1:54250..54328;Dbxref=InterPro:IPR001544,PFAM:PF01063;Note=aminotran_4~aminotransferase%2C class iv;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54280 54298 . + . ID=id-AFQR01000041.1:54280..54298;Note=superfamily%3B label: PLPDE_IV superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54325 54334 . + . ID=id-AFQR01000041.1:54325..54334;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 54576 55547 . - . ID=gene-GGE_2101;Name=GGE_2101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank CDS 54576 55547 . - 0 ID=cds-EGT79055.1;Parent=gene-GGE_2101;Dbxref=GeneID:17368523,InterPro:IPR005801,InterPro:IPR015890,InterPro:IPR019999,PFAM:PF00425,NCBI_GP:EGT79055.1;Name=EGT79055.1;Note=HI_1170;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||;locus_tag=GGE_2101;product=putative chorismate-binding protein;protein_id=EGT79055.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54576 55533 . - . ID=id-GGE_2101;Note=superfamily%3B label: Chorismate_bind superfamily;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54705 55419 . - . ID=id-GGE_2101-2;Dbxref=InterPro:IPR005801;Note=superfamily:SSF56322~adc synthase~adc synthase;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54714 54723 . - . ID=id-GGE_2101-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54744 55356 . - . ID=id-GGE_2101-4;Dbxref=InterPro:IPR005801;Note=Gene3D:3.60.120.10~adc synthase;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54786 55329 . - . ID=id-GGE_2101-5;Note=HMMPanther:PTHR11236:SF4~gb def: putative para-aminobenzoate synthase component i~HMMPanther:PTHR11236~family not named;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54789 55308 . - . ID=id-GGE_2101-6;Dbxref=InterPro:IPR015890,PFAM:PF00425;Note=chorismate_bind~chorismate-binding protein;gbkey=misc_feature;locus_tag=GGE_2101 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54618 55095 . + . ID=id-AFQR01000041.1:54618..55095;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54618 55053 . + . ID=id-AFQR01000041.1:54618..55053;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 54621 55347 . + . ID=id-AFQR01000041.1:54621..55347;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 55556 56185 . + . ID=gene-GGE_2102;Name=GGE_2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank CDS 55556 56185 . + 0 ID=cds-EGT79056.1;Parent=gene-GGE_2102;Dbxref=GeneID:1174796,InterPro:IPR006220,InterPro:IPR006221,InterPro:IPR011702,InterPro:IPR017926,PFAM:PF00117,TIGRFAM:TIGR00566,NCBI_GP:EGT79056.1;Name=EGT79056.1;Note=HI_1171;Ontology_term=GO:0009058,GO:0006541,GO:0008152,GO:0004049,GO:0003824;gbkey=CDS;go_function=anthranilate synthase activity|0004049||,catalytic activity|0003824||;go_process=biosynthetic process|0009058||,glutamine metabolic process|0006541||,metabolic process|0008152||;locus_tag=GGE_2102;product=Putative anthranilate synthase component II;protein_id=EGT79056.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55589 56153 . + . ID=id-GGE_2102;Note=HMMPanther:PTHR11922:SF7~subfamily not named~HMMPanther:PTHR11922~family not named;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55604 56123 . + . ID=id-GGE_2102-2;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55610 56132 . + . ID=id-GGE_2102-3;Dbxref=InterPro:IPR017926;Note=ProfileScan:PS51273~gatase_type_1~glutamine amidotransferase type 1;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55610 56114 . + . ID=id-GGE_2102-4;Dbxref=InterPro:IPR006221,TIGRFAM:TIGR00566;Note=Gene3D:3.40.50.880~trpg_papa: glutamine amidotransferase of a~anthranilate synthase%2C glutamine amidotransferase;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55613 56105 . + . ID=id-GGE_2102-5;Note=specific~superfamily%3B label: GATase1_Anthranilate_Synthase;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55616 56102 . + . ID=id-GGE_2102-6;Dbxref=InterPro:IPR017926,PFAM:PF00117;Note=multi-dom~gatase~glutamine amidotransferase type 1%3B label: GATase;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55921 55930 . + . ID=id-GGE_2102-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2102 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55583 55898 . - . ID=id-AFQR01000041.1:55583..55898;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55586 55742 . - . ID=id-AFQR01000041.1:55586..55742;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55592 55823 . - . ID=id-AFQR01000041.1:55592..55823;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55595 55961 . - . ID=id-AFQR01000041.1:55595..55961;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55598 56096 . - . ID=id-AFQR01000041.1:55598..56096;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 55601 55613 . - . ID=id-AFQR01000041.1:55601..55613;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56032 56041 . - . ID=id-AFQR01000041.1:56032..56041;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 56270 57424 . + . ID=gene-GGE_2103;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank CDS 56270 57424 . + 0 ID=cds-EGT79057.1;Parent=gene-GGE_2103;Dbxref=GeneID:166201394,InterPro:IPR002133,InterPro:IPR022628,InterPro:IPR022629,InterPro:IPR022630,InterPro:IPR022631,InterPro:IPR022636,PFAM:PF00438,PFAM:PF02772,PFAM:PF02773,PIR:PIRSF000497,TIGRFAM:TIGR01034,NCBI_GP:EGT79057.1;Name=EGT79057.1;Ontology_term=GO:0006730,GO:0005524,GO:0004478;gbkey=CDS;gene=metK;go_function=ATP binding|0005524||,methionine adenosyltransferase activity|0004478||;go_process=one-carbon metabolic process|0006730||;locus_tag=GGE_2103;product=S-adenosylmethionine synthase;protein_id=EGT79057.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56270 57419 . + . ID=id-GGE_2103;Dbxref=InterPro:IPR002133,PIR:PIRSF000497;Note=methionine adenosyltransferase~s-adenosylmethionine synthetase;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56270 57410 . + . ID=id-GGE_2103-2;Dbxref=InterPro:IPR002133;Note=HMMPanther:PTHR11964~family not named~s-adenosylmethionine synthetase;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56276 57416 . + . ID=id-GGE_2103-3;Note=multi-dom%3B label: PRK05250;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56276 57410 . + . ID=id-GGE_2103-4;Dbxref=InterPro:IPR002133;Note=HAMAP:MF_00086~s_adomet_synth1~s-adenosylmethionine synthetase;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56276 56576 . + . ID=id-GGE_2103-5;Dbxref=InterPro:IPR022636;Note=superfamily:SSF55973~s-adenosylmethionine synthetase~s-adenosylmethionine synthetase superfamily;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56279 56567 . + . ID=id-GGE_2103-6;Dbxref=InterPro:IPR022628,PFAM:PF00438;Note=s-adomet_synt_n~s-adenosylmethionine synthetase;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56282 56564 . + . ID=id-GGE_2103-7;Note=superfamily%3B label: S-AdoMet_synt_N superfamily;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56285 57401 . + . ID=id-GGE_2103-8;Dbxref=InterPro:IPR002133,TIGRFAM:TIGR01034;Note=metk: methionine adenosyltransferase~s-adenosylmethionine synthetase;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56303 56630 . + . ID=id-GGE_2103-9;Note=Gene3D:3.30.300.10;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56597 56642 . + . ID=id-GGE_2103-10;Dbxref=InterPro:IPR022636;Note=superfamily:SSF55973~s-adenosylmethionine synthetase~s-adenosylmethionine synthetase superfamily;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56612 56624 . + . ID=id-GGE_2103-11;Dbxref=InterPro:IPR022629,PFAM:PF02772;Note=superfamily~s-adomet_synt_m~s-adenosylmethionine synthetase%2C central domain%3B label: S-AdoMet_synt_M superfamily;gbkey=misc_feature;gene=metK;locus_tag=GGE_2103 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56297 57047 . - . ID=id-AFQR01000041.1:56297..57047;Dbxref=InterPro:IPR022631;Note=PatternScan:PS00377~adomet_synthase_2~s-adenosylmethionine synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56303 56618 . - . ID=id-AFQR01000041.1:56303..56618;Dbxref=InterPro:IPR022631;Note=PatternScan:PS00376~adomet_synthase_1~s-adenosylmethionine synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56387 56927 . - . ID=id-AFQR01000041.1:56387..56927;Note=Gene3D:3.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56534 56663 . - . ID=id-AFQR01000041.1:56534..56663;Note=Gene3D:3.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56642 57044 . - . ID=id-AFQR01000041.1:56642..57044;Note=Gene3D:3.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56684 56969 . - . ID=id-AFQR01000041.1:56684..56969;Dbxref=InterPro:IPR022630,PFAM:PF02773;Note=superfamily~s-adomet_synt_c~s-adenosylmethionine synthetase%3B label: S-AdoMet_synt_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 56702 56969 . - . ID=id-AFQR01000041.1:56702..56969;Dbxref=InterPro:IPR022636;Note=superfamily:SSF55973~s-adenosylmethionine synthetase~s-adenosylmethionine synthetase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 57489 58004 . + . ID=gene-GGE_2104;Name=sprT;gbkey=Gene;gene=sprT;gene_biotype=protein_coding;locus_tag=GGE_2104 GCA_000222085.2|AFQR01000041.1 Genbank CDS 57489 58004 . + 0 ID=cds-EGT79058.1;Parent=gene-GGE_2104;Dbxref=GeneID:1176096,InterPro:IPR006640,InterPro:IPR023483,PFAM:PF10263,NCBI_GP:EGT79058.1;Name=EGT79058.1;gbkey=CDS;gene=sprT;locus_tag=GGE_2104;product=Protein sprT;protein_id=EGT79058.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 57525 57969 . + . ID=id-GGE_2104;Note=superfamily%3B label: SprT superfamily;gbkey=misc_feature;gene=sprT;locus_tag=GGE_2104 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 57531 57951 . + . ID=id-GGE_2104-2;Dbxref=InterPro:IPR023483;Note=HAMAP:MF_00746~sprt~uncharacterised protein family sprt;gbkey=misc_feature;gene=sprT;locus_tag=GGE_2104 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 57549 57936 . + . ID=id-GGE_2104-3;Note=multi-dom%3B label: SprT-like;gbkey=misc_feature;gene=sprT;locus_tag=GGE_2104 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 57564 57918 . + . ID=id-GGE_2104-4;Dbxref=InterPro:IPR006640,PFAM:PF10263;Note=sprt-like~domain of unknown function sprt-like;gbkey=misc_feature;gene=sprT;locus_tag=GGE_2104 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 57672 57681 . - . ID=id-AFQR01000041.1:57672..57681;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 58055 58567 . + . ID=gene-GGE_2105;Name=GGE_2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2105 GCA_000222085.2|AFQR01000041.1 Genbank CDS 58055 58567 . + 0 ID=cds-EGT79059.1;Parent=gene-GGE_2105;Dbxref=GeneID:145627849,InterPro:IPR003394,InterPro:IPR011250,PFAM:PF02462,NCBI_GP:EGT79059.1;Name=EGT79059.1;Note=ZP_01783650;Ontology_term=GO:0009279,GO:0016021,GO:0016020,GO:0015288;gbkey=CDS;go_component=cell outer membrane|0009279||,integral to membrane|0016021||,membrane|0016020||;go_function=porin activity|0015288||;locus_tag=GGE_2105;product=arginine transporter permease subunit ArtM;protein_id=EGT79059.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58070 58115 . + . ID=id-GGE_2105;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2105 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58109 58514 . + . ID=id-GGE_2105-2;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature;locus_tag=GGE_2105 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58115 58508 . + . ID=id-GGE_2105-3;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_2105 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58205 58418 . + . ID=id-GGE_2105-4;Dbxref=InterPro:IPR003394,PFAM:PF02462;Note=superfamily~opacity~porin%2C opacity type%3B label: Surface_Ag_2 superfamily;gbkey=misc_feature;locus_tag=GGE_2105 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58673 58682 . + . ID=id-AFQR01000041.1:58673..58682;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58792 58801 . - . ID=id-AFQR01000041.1:58792..58801;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 58801 59484 . - . ID=gene-GGE_2106;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank CDS 58801 59484 . - 0 ID=cds-EGT79060.1;Parent=gene-GGE_2106;Dbxref=GeneID:1168524,InterPro:IPR000515,InterPro:IPR010065,PFAM:PF00528,TIGRFAM:TIGR01726,NCBI_GP:EGT79060.1;Name=EGT79060.1;Ontology_term=GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;gene=artM;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2106;product=Arginine ABC transporter permease protein ArtM;protein_id=EGT79060.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58816 59125 . - . ID=id-GGE_2106;Dbxref=InterPro:IPR010065,TIGRFAM:TIGR01726;Note=heqro_perm_3tm: amino abc transporter%2C~amino acid abc transporter%2C permease protein%2C 3-tm domain%2C his/glu/gln/arg/opine family;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58828 59422 . - . ID=id-GGE_2106-2;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58840 59392 . - . ID=id-GGE_2106-3;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58846 58873 . - . ID=id-GGE_2106-4;Note=seg;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58846 58870 . - . ID=id-GGE_2106-5;Note=transmembrane_regions;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58900 59344 . - . ID=id-GGE_2106-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58927 59203 . - . ID=id-GGE_2106-7;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=artM;locus_tag=GGE_2106 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58834 59083 . + . ID=id-AFQR01000041.1:58834..59083;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58861 58948 . + . ID=id-AFQR01000041.1:58861..58948;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58870 59362 . + . ID=id-AFQR01000041.1:58870..59362;Note=transmembrane_regions~seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58870 59266 . + . ID=id-AFQR01000041.1:58870..59266;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 58870 59050 . + . ID=id-AFQR01000041.1:58870..59050;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 59484 60149 . - . ID=gene-GGE_2107;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank CDS 59484 60149 . - 0 ID=cds-EGT79061.1;Parent=gene-GGE_2107;Dbxref=GeneID:1168526,InterPro:IPR000515,InterPro:IPR010065,PFAM:PF00528,TIGRFAM:TIGR01726,NCBI_GP:EGT79061.1;Name=EGT79061.1;Ontology_term=GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;gene=artQ;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2107;product=Arginine ABC transporter permease protein ArtQ;protein_id=EGT79061.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59499 59796 . - . ID=id-GGE_2107;Dbxref=InterPro:IPR010065,TIGRFAM:TIGR01726;Note=heqro_perm_3tm: amino abc transporter%2C~amino acid abc transporter%2C permease protein%2C 3-tm domain%2C his/glu/gln/arg/opine family;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59502 59529 . - . ID=id-GGE_2107-2;Note=seg;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59511 60102 . - . ID=id-GGE_2107-3;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59523 60066 . - . ID=id-GGE_2107-4;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59529 59553 . - . ID=id-GGE_2107-5;Note=transmembrane_regions;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59565 60012 . - . ID=id-GGE_2107-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59604 59973 . - . ID=id-GGE_2107-7;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=artQ;locus_tag=GGE_2107 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59520 59553 . + . ID=id-AFQR01000041.1:59520..59553;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59553 60036 . + . ID=id-AFQR01000041.1:59553..60036;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59553 59727 . + . ID=id-AFQR01000041.1:59553..59727;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 59553 59631 . + . ID=id-AFQR01000041.1:59553..59631;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 60153 60872 . - . ID=gene-GGE_2108;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank CDS 60153 60872 . - 0 ID=cds-EGT79062.1;Parent=gene-GGE_2108;Dbxref=GeneID:1168523,InterPro:IPR001638,InterPro:IPR005768,InterPro:IPR018313,PFAM:PF00497,TIGRFAM:TIGR01096,NCBI_GP:EGT79062.1;Name=EGT79062.1;Ontology_term=GO:0006810,GO:0030288,GO:0005215;gbkey=CDS;gene=artI;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2108;product=ABC transporter arginine-binding protein;protein_id=EGT79062.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60153 60870 . - . ID=id-GGE_2108;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60159 60861 . - . ID=id-GGE_2108-2;Dbxref=InterPro:IPR005768,TIGRFAM:TIGR01096;Note=3a0103s03r: lysine-arginine-ornithine-bind~lysine-arginine-ornithine-binding periplasmic protein;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60165 60177 . - . ID=id-GGE_2108-3;Note=seg;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60192 60825 . - . ID=id-GGE_2108-4;Note=multi-dom%3B label: 3A0103s03R;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60195 60831 . - . ID=id-GGE_2108-5;Note=HMMPanther:PTHR18966:SF42~subfamily not named~HMMPanther:PTHR18966~family not named;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60219 60804 . - . ID=id-GGE_2108-6;Dbxref=InterPro:IPR001638,PFAM:PF00497;Note=sbp_bac_3~extracellular solute-binding protein%2C family 3;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60219 60798 . - . ID=id-GGE_2108-7;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=artI;locus_tag=GGE_2108 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60195 60285 . + . ID=id-AFQR01000041.1:60195..60285;Dbxref=InterPro:IPR018313;Note=PatternScan:PS01039~sbp_bacterial_3~extracellular solute-binding protein%2C family 3%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60276 60747 . + . ID=id-AFQR01000041.1:60276..60747;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60402 60498 . + . ID=id-AFQR01000041.1:60402..60498;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 60890 61621 . - . ID=gene-GGE_2109;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank CDS 60890 61621 . - 0 ID=cds-EGT79063.1;Parent=gene-GGE_2109;Dbxref=GeneID:1168525,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT79063.1;Name=EGT79063.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_2109;product=Arginine transport ATP-binding protein ArtP;protein_id=EGT79063.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60890 61619 . - . ID=id-GGE_2109;Note=multi-dom~HMMPanther:PTHR24220:SF33~subfamily not named~HMMPanther:PTHR24220~family not named%3B label: artP;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60896 61595 . - . ID=id-GGE_2109-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60899 61610 . - . ID=id-GGE_2109-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60899 61544 . - . ID=id-GGE_2109-4;Note=specific~superfamily%3B label: ABC_HisP_GlnQ_permeases;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60905 61550 . - . ID=id-GGE_2109-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61016 61280 . - . ID=id-GGE_2109-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=artP;locus_tag=GGE_2109 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 60935 61319 . + . ID=id-AFQR01000041.1:60935..61319;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61739 61748 . - . ID=id-AFQR01000041.1:61739..61748;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 61748 62332 . - . ID=gene-GGE_2110;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank CDS 61748 62332 . - 0 ID=cds-EGT79064.1;Parent=gene-GGE_2110;Dbxref=GeneID:166233776,InterPro:IPR001347,InterPro:IPR004515,InterPro:IPR020620,PFAM:PF01380,TIGRFAM:TIGR00441,NCBI_GP:EGT79064.1;Name=EGT79064.1;Ontology_term=GO:0005975,GO:0009244,GO:0005737,GO:0008968,GO:0005529;gbkey=CDS;gene=gmhA;go_component=cytoplasm|0005737||;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||,sugar binding|0005529||;go_process=carbohydrate metabolic process|0005975||,lipopolysaccharide core region biosynthetic process|0009244||;locus_tag=GGE_2110;product=Phosphoheptose isomerase;protein_id=EGT79064.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61748 62327 . - . ID=id-GGE_2110;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61748 62318 . - . ID=id-GGE_2110-2;Dbxref=InterPro:IPR020620;Note=HAMAP:MF_00067~gmha~phosphoheptose isomerase;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61757 61814 . - . ID=id-GGE_2110-3;Note=coiled-coil;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61760 62315 . - . ID=id-GGE_2110-4;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61817 62243 . - . ID=id-GGE_2110-5;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61850 62210 . - . ID=id-GGE_2110-6;Dbxref=InterPro:IPR004515,TIGRFAM:TIGR00441;Note=gmha: phosphoheptose isomerase~phosphoheptose isomerase%2C subgroup;gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61859 62222 . - . ID=id-GGE_2110-7;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature;gene=gmhA;locus_tag=GGE_2110 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 61985 62057 . + . ID=id-AFQR01000041.1:61985..62057;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 62540 63346 . + . ID=gene-GGE_2111;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank CDS 62540 63346 . + 0 ID=cds-EGT79065.1;Parent=gene-GGE_2111;Dbxref=InterPro:IPR012310,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR016059,PFAM:PF01068,NCBI_GP:EGT79065.1;Name=EGT79065.1;Ontology_term=GO:0051103,GO:0006310,GO:0006281,GO:0005524,GO:0003910,GO:0003909;gbkey=CDS;gene=ligA;go_function=ATP binding|0005524||,DNA ligase (ATP) activity|0003910||,DNA ligase activity|0003909||;go_process=DNA ligation involved in DNA repair|0051103||,DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_2111;product=DNA ligase;protein_id=EGT79065.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62561 62576 . + . ID=id-GGE_2111;Note=seg;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62567 63083 . + . ID=id-GGE_2111-2;Note=superfamily:SSF56091~dna ligase/mrna capping enzyme%2C catalytic domain;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62600 63053 . + . ID=id-GGE_2111-3;Note=specific~superfamily%3B label: Adenylation_DNA_ligase_like superfamily;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62609 63269 . + . ID=id-GGE_2111-4;Note=multi-dom%3B label: ligB;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62645 63239 . + . ID=id-GGE_2111-5;Note=HMMPanther:PTHR10459:SF20~atp dependent dna ligase domain containing protein~HMMPanther:PTHR10459~dna ligase;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62645 63005 . + . ID=id-GGE_2111-6;Dbxref=InterPro:IPR012310,PFAM:PF01068;Note=dna_ligase_a_m~dna ligase%2C atp-dependent%2C central;gbkey=misc_feature;gene=ligA;locus_tag=GGE_2111 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62612 63038 . - . ID=id-AFQR01000041.1:62612..63038;Dbxref=InterPro:IPR016059;Note=PatternScan:PS00333~dna_ligase_a2~dna ligase%2C atp-dependent%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62759 62900 . - . ID=id-AFQR01000041.1:62759..62900;Note=Gene3D:3.30.1490.70;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62765 63119 . - . ID=id-AFQR01000041.1:62765..63119;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62768 63116 . - . ID=id-AFQR01000041.1:62768..63116;Note=specific~superfamily%3B label: OBF_DNA_ligase_family superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 62858 63026 . - . ID=id-AFQR01000041.1:62858..63026;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 63375 64358 . - . ID=gene-GGE_2112;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank CDS 63375 64358 . - 0 ID=cds-EGT79066.1;Parent=gene-GGE_2112;Dbxref=GeneID:1169418,InterPro:IPR003439,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,PFAM:PF00005,PFAM:PF08352,TIGRFAM:TIGR01727,NCBI_GP:EGT79066.1;Name=EGT79066.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0000166,GO:0015197;gbkey=CDS;gene=dppF;go_function=ATP binding|0005524||,ATPase activity|0016887||,nucleotide binding|0000166||,peptide transporter activity|0015197||;go_process=peptide transport|0015833||;locus_tag=GGE_2112;product=Dipeptide transport ATP-binding protein DppF;protein_id=EGT79066.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63390 64161 . - . ID=id-GGE_2112;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63399 64335 . - . ID=id-GGE_2112-2;Note=multi-dom%3B label: dppF;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63405 64329 . - . ID=id-GGE_2112-3;Note=HMMPanther:PTHR24220:SF28~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63408 64074 . - . ID=id-GGE_2112-4;Note=specific~superfamily%3B label: ABC_NikE_OppD_transporters;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63411 64125 . - . ID=id-GGE_2112-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63510 64173 . - . ID=id-GGE_2112-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63558 63759 . - . ID=id-GGE_2112-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=dppF;locus_tag=GGE_2112 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63420 63858 . + . ID=id-AFQR01000041.1:63420..63858;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63573 64095 . + . ID=id-AFQR01000041.1:63573..64095;Dbxref=InterPro:IPR013563,PFAM:PF08352;Note=oligo_hpy~oligopeptide/dipeptide abc transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63630 64095 . + . ID=id-AFQR01000041.1:63630..64095;Note=superfamily%3B label: oligo_HPY superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 63639 64089 . + . ID=id-AFQR01000041.1:63639..64089;Dbxref=InterPro:IPR010066,TIGRFAM:TIGR01727;Note=oligo_hpy: oligopeptide/dipeptide abc trans~oligopeptide/dipeptide abc transporter%2C atp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 64361 65353 . - . ID=gene-GGE_2113;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank CDS 64361 65353 . - 0 ID=cds-EGT79067.1;Parent=gene-GGE_2113;Dbxref=GeneID:1169417,InterPro:IPR003439,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,PFAM:PF00005,PFAM:PF08352,TIGRFAM:TIGR01727,NCBI_GP:EGT79067.1;Name=EGT79067.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0000166,GO:0015197;gbkey=CDS;gene=dppD;go_function=ATP binding|0005524||,ATPase activity|0016887||,nucleotide binding|0000166||,peptide transporter activity|0015197||;go_process=peptide transport|0015833||;locus_tag=GGE_2113;product=Dipeptide transport ATP-binding protein DppD;protein_id=EGT79067.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64361 65336 . - . ID=id-GGE_2113;Note=multi-dom%3B label: dppD;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64361 65297 . - . ID=id-GGE_2113-2;Note=HMMPanther:PTHR24220:SF108~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64370 65063 . - . ID=id-GGE_2113-3;Note=specific~superfamily%3B label: ABC_NikE_OppD_transporters;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64376 65198 . - . ID=id-GGE_2113-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64379 65108 . - . ID=id-GGE_2113-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64454 65177 . - . ID=id-GGE_2113-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64565 64706 . - . ID=id-GGE_2113-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=dppD;locus_tag=GGE_2113 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64403 64472 . + . ID=id-AFQR01000041.1:64403..64472;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64406 64823 . + . ID=id-AFQR01000041.1:64406..64823;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64556 65060 . + . ID=id-AFQR01000041.1:64556..65060;Dbxref=InterPro:IPR013563,PFAM:PF08352;Note=oligo_hpy~oligopeptide/dipeptide abc transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64616 65054 . + . ID=id-AFQR01000041.1:64616..65054;Note=superfamily%3B label: oligo_HPY superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64619 65054 . + . ID=id-AFQR01000041.1:64619..65054;Dbxref=InterPro:IPR010066,TIGRFAM:TIGR01727;Note=oligo_hpy: oligopeptide/dipeptide abc trans~oligopeptide/dipeptide abc transporter%2C atp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 64958 64967 . + . ID=id-AFQR01000041.1:64958..64967;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 65363 66250 . - . ID=gene-GGE_2114;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=GGE_2114 GCA_000222085.2|AFQR01000041.1 Genbank CDS 65363 66250 . - 0 ID=cds-EGT79068.1;Parent=gene-GGE_2114;Dbxref=GeneID:1706515,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT79068.1;Name=EGT79068.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=dppC;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2114;product=Dipeptide transport system permease protein dppC;protein_id=EGT79068.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65447 66149 . - . ID=id-GGE_2114;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=dppC;locus_tag=GGE_2114 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65642 65933 . - . ID=id-GGE_2114-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=dppC;locus_tag=GGE_2114 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65645 65903 . - . ID=id-GGE_2114-3;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=dppC;locus_tag=GGE_2114 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65696 65915 . - . ID=id-GGE_2114-4;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=dppC;locus_tag=GGE_2114 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65408 65738 . + . ID=id-AFQR01000041.1:65408..65738;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 66140 . + . ID=id-AFQR01000041.1:65432..66140;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 65942 . + . ID=id-AFQR01000041.1:65432..65942;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 65831 . + . ID=id-AFQR01000041.1:65432..65831;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 65744 . + . ID=id-AFQR01000041.1:65432..65744;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 65648 . + . ID=id-AFQR01000041.1:65432..65648;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 65432 65447 . + . ID=id-AFQR01000041.1:65432..65447;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66069 66078 . + . ID=id-AFQR01000041.1:66069..66078;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 66265 67266 . - . ID=gene-GGE_2115;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=GGE_2115 GCA_000222085.2|AFQR01000041.1 Genbank CDS 66265 67266 . - 0 ID=cds-EGT79069.1;Parent=gene-GGE_2115;Dbxref=GeneID:1169416,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT79069.1;Name=EGT79069.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=dppB;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2115;product=Dipeptide transport system permease protein dppB;protein_id=EGT79069.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66292 66334 . - . ID=id-GGE_2115;Note=transmembrane_regions;gbkey=misc_feature;gene=dppB;locus_tag=GGE_2115 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66553 66952 . - . ID=id-GGE_2115-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=dppB;locus_tag=GGE_2115 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66553 66946 . - . ID=id-GGE_2115-3;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=dppB;locus_tag=GGE_2115 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66607 66922 . - . ID=id-GGE_2115-4;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=dppB;locus_tag=GGE_2115 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66298 66310 . + . ID=id-AFQR01000041.1:66298..66310;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66325 66856 . + . ID=id-AFQR01000041.1:66325..66856;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66325 66571 . + . ID=id-AFQR01000041.1:66325..66571;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66334 67183 . + . ID=id-AFQR01000041.1:66334..67183;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66334 67030 . + . ID=id-AFQR01000041.1:66334..67030;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 66334 66667 . + . ID=id-AFQR01000041.1:66334..66667;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67303 67312 . - . ID=id-AFQR01000041.1:67303..67312;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 67354 69534 . - . ID=gene-GGE_2116;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank CDS 67354 69534 . - 0 ID=cds-EGT79070.1;Parent=gene-GGE_2116;Dbxref=GeneID:1174922,InterPro:IPR000212,InterPro:IPR005753,InterPro:IPR013986,InterPro:IPR014016,InterPro:IPR014017,PFAM:PF00580,TIGRFAM:TIGR01075,NCBI_GP:EGT79070.1;Name=EGT79070.1;Ontology_term=GO:0006281,GO:0006268,GO:0005737,GO:0005524,GO:0004003,GO:0003677,GO:0016787;gbkey=CDS;gene=uvrD;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,ATP-dependent DNA helicase activity|0004003||,DNA binding|0003677||,hydrolase activity|0016787||;go_process=DNA repair|0006281||,DNA unwinding involved in replication|0006268||;locus_tag=GGE_2116;product=DNA helicase II;protein_id=EGT79070.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67354 69529 . - . ID=id-GGE_2116;Note=multi-dom%3B label: uvrD;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67355 67364 . - . ID=id-GGE_2116-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67363 69295 . - . ID=id-GGE_2116-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67372 69508 . - . ID=id-GGE_2116-4;Dbxref=InterPro:IPR005753,TIGRFAM:TIGR01075;Note=uvrd: dna helicase ii~dna helicase%2C atp-dependent%2C uvrd type;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67372 69274 . - . ID=id-GGE_2116-5;Dbxref=InterPro:IPR000212;Note=HMMPanther:PTHR11070~family not named~dna helicase%2C uvrd/rep type;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67378 68200 . - . ID=id-GGE_2116-6;Dbxref=InterPro:IPR014016;Note=ProfileScan:PS51198~uvrd_helicase_atp_bind~helicase%2C superfamily 1%2C uvrd-related;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67384 68806 . - . ID=id-GGE_2116-7;Note=superfamily%3B label: UvrD-helicase superfamily;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67384 68803 . - . ID=id-GGE_2116-8;Dbxref=InterPro:IPR000212,PFAM:PF00580;Note=uvrd-helicase~dna helicase%2C uvrd/rep type;gbkey=misc_feature;gene=uvrD;locus_tag=GGE_2116 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67396 69115 . + . ID=id-AFQR01000041.1:67396..69115;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67579 67699 . + . ID=id-AFQR01000041.1:67579..67699;Dbxref=InterPro:IPR013986;Note=Gene3D:1.10.10.160~dna helicase%2C dexx box type;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67639 69016 . + . ID=id-AFQR01000041.1:67639..69016;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67651 67924 . + . ID=id-AFQR01000041.1:67651..67924;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 67828 68521 . + . ID=id-AFQR01000041.1:67828..68521;Note=Gene3D:1.10.486.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 68188 68224 . + . ID=id-AFQR01000041.1:68188..68224;Dbxref=InterPro:IPR014017;Note=ProfileScan:PS51217~uvrd_helicase_cter~dna helicase%2C uvrd-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 68257 68266 . + . ID=id-AFQR01000041.1:68257..68266;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 69793 70854 . + . ID=gene-GGE_2117;Name=GGE_2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2117 GCA_000222085.2|AFQR01000041.1 Genbank CDS 69793 70854 . + 0 ID=cds-EGT79071.1;Parent=gene-GGE_2117;Dbxref=GeneID:315634638,InterPro:IPR006059,PFAM:PF01547,NCBI_GP:EGT79071.1;Name=EGT79071.1;Note=ZP_07889922;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2117;product=iron Fe3+ ABC superfamily ATP binding cassette transporter%2C binding protein;protein_id=EGT79071.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69886 70762 . + . ID=id-GGE_2117;Note=multi-dom%3B label: PotD;gbkey=misc_feature;locus_tag=GGE_2117 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69895 70726 . + . ID=id-GGE_2117-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_2117 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69952 70513 . + . ID=id-GGE_2117-3;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;locus_tag=GGE_2117 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69961 70675 . + . ID=id-GGE_2117-4;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_2117 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69831 69840 . - . ID=id-AFQR01000041.1:69831..69840;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69838 69841 . - . ID=id-AFQR01000041.1:69838..69841;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 69970 70624 . - . ID=id-AFQR01000041.1:69970..70624;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70082 70091 . - . ID=id-AFQR01000041.1:70082..70091;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70198 70219 . - . ID=id-AFQR01000041.1:70198..70219;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70871 70880 . + . ID=id-AFQR01000041.1:70871..70880;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70889 70898 . - . ID=id-AFQR01000041.1:70889..70898;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 70960 72855 . + . ID=gene-GGE_2118;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank CDS 70960 72855 . + 0 ID=cds-EGT79072.1;Parent=gene-GGE_2118;Dbxref=GeneID:17865756,InterPro:IPR001404,InterPro:IPR003594,InterPro:IPR019805,InterPro:IPR020568,InterPro:IPR020575,PFAM:PF00183,PFAM:PF02518,PIR:PIRSF002583,NCBI_GP:EGT79072.1;Name=EGT79072.1;Ontology_term=GO:0006457,GO:0006950,GO:0005524,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||,unfolded protein binding|0051082||;go_process=protein folding|0006457||,response to stress|0006950||;locus_tag=GGE_2118;product=Chaperone protein htpG;protein_id=EGT79072.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70975 72838 . + . ID=id-GGE_2118;Dbxref=InterPro:IPR001404;Note=HMMPanther:PTHR11528:SF38~subfamily not named~HMMPanther:PTHR11528~family not named~heat shock protein hsp90;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70984 72832 . + . ID=id-GGE_2118-2;Dbxref=InterPro:IPR001404;Note=HAMAP:MF_00505~hsp90~heat shock protein hsp90;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70984 72829 . + . ID=id-GGE_2118-3;Note=multi-dom%3B label: PRK05218;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70987 72829 . + . ID=id-GGE_2118-4;Dbxref=InterPro:IPR001404,PIR:PIRSF002583;Note=heat shock protein%2C hsp90/htpg types~heat shock protein hsp90;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70987 71605 . + . ID=id-GGE_2118-5;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70993 71665 . + . ID=id-GGE_2118-6;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70993 71023 . + . ID=id-GGE_2118-7;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71065 71311 . + . ID=id-GGE_2118-8;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71071 71416 . + . ID=id-GGE_2118-9;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71638 72175 . + . ID=id-GGE_2118-10;Dbxref=InterPro:IPR001404,PFAM:PF00183;Note=hsp90~heat shock protein hsp90;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71671 71734 . + . ID=id-GGE_2118-11;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=htpG;locus_tag=GGE_2118 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70990 72442 . - . ID=id-AFQR01000041.1:70990..72442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 70990 71053 . - . ID=id-AFQR01000041.1:70990..71053;Dbxref=InterPro:IPR019805;Note=PatternScan:PS00298~hsp90~heat shock protein hsp90%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71014 71494 . - . ID=id-AFQR01000041.1:71014..71494;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71014 71257 . - . ID=id-AFQR01000041.1:71014..71257;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71014 71203 . - . ID=id-AFQR01000041.1:71014..71203;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71017 71548 . - . ID=id-AFQR01000041.1:71017..71548;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71029 71338 . - . ID=id-AFQR01000041.1:71029..71338;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71029 71056 . - . ID=id-AFQR01000041.1:71029..71056;Dbxref=InterPro:IPR020575;Note=FPrintScan:PR00775~heatshock90~heat shock protein hsp90;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 71299 72514 . - . ID=id-AFQR01000041.1:71299..72514;Note=superfamily:SSF110942~hsp90 c-terminal domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 72887 73243 . - . ID=gene-GGE_2119;Name=GGE_2119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2119 GCA_000222085.2|AFQR01000041.1 Genbank CDS 72887 73243 . - 0 ID=cds-EGT79073.1;Parent=gene-GGE_2119;Dbxref=GeneID:254361524,NCBI_GP:EGT79073.1;Name=EGT79073.1;Note=ZP_04977662~MHA_1120;gbkey=CDS;locus_tag=GGE_2119;product=Hypothetical protein;protein_id=EGT79073.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank gene 73252 73419 . - . ID=gene-GGE_2120;Name=GGE_2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2120 GCA_000222085.2|AFQR01000041.1 Genbank CDS 73252 73419 . - 0 ID=cds-EGT79074.1;Parent=gene-GGE_2120;Dbxref=GeneID:254361525,NCBI_GP:EGT79074.1;Name=EGT79074.1;Note=ZP_04977663~MHA_1121;gbkey=CDS;locus_tag=GGE_2120;product=Hypothetical protein;protein_id=EGT79074.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank gene 73554 73898 . + . ID=gene-GGE_2121;Name=GGE_2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank CDS 73554 73898 . + 0 ID=cds-EGT79075.1;Parent=gene-GGE_2121;Dbxref=GeneID:1175963,InterPro:IPR006504,InterPro:IPR006660,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF03960,TIGRFAM:TIGR01617,NCBI_GP:EGT79075.1;Name=EGT79075.1;Note=HI_0103;gbkey=CDS;locus_tag=GGE_2121;product=putative arsenate reductase-like protein;protein_id=EGT79075.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73554 73896 . + . ID=id-GGE_2121;Dbxref=InterPro:IPR006660,InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold~ProfileScan:PS51353~arsc~arsenate reductase-like;gbkey=misc_feature;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73554 73893 . + . ID=id-GGE_2121-2;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73560 73893 . + . ID=id-GGE_2121-3;Dbxref=InterPro:IPR006504,TIGRFAM:TIGR01617;Note=arsc_related: transcriptional regulator%2C~transcriptional regulator spx/mgsr;gbkey=misc_feature;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73560 73869 . + . ID=id-GGE_2121-4;Note=specific~superfamily%3B label: ArsC_Yffb;gbkey=misc_feature;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73569 73881 . + . ID=id-GGE_2121-5;Dbxref=InterPro:IPR006660,PFAM:PF03960;Note=arsc~arsenate reductase-like;gbkey=misc_feature;locus_tag=GGE_2121 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73781 73790 . - . ID=id-AFQR01000041.1:73781..73790;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73896 73905 . + . ID=id-AFQR01000041.1:73896..73905;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 73926 75065 . + . ID=gene-GGE_2122;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank CDS 73926 75065 . + 0 ID=cds-EGT79076.1;Parent=gene-GGE_2122;Dbxref=GeneID:81336873,InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR005941,InterPro:IPR011650,PFAM:PF01546,PFAM:PF07687,TIGRFAM:TIGR01246,NCBI_GP:EGT79076.1;Name=EGT79076.1;Ontology_term=GO:0009089,GO:0008152,GO:0006508,GO:0016787,GO:0008237,GO:0009014;gbkey=CDS;gene=dapE;go_function=hydrolase activity|0016787||,metallopeptidase activity|0008237||,succinyl-diaminopimelate desuccinylase activity|0009014||;go_process=lysine biosynthetic process via diaminopimelate|0009089||,metabolic process|0008152||,proteolysis|0006508||;locus_tag=GGE_2122;product=Succinyl-diaminopimelate desuccinylase;protein_id=EGT79076.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73926 75057 . + . ID=id-GGE_2122;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73926 75054 . + . ID=id-GGE_2122-2;Note=HMMPanther:PTHR11014:SF5~acetylornithine deacetylase~HMMPanther:PTHR11014~family not named;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73935 75054 . + . ID=id-GGE_2122-3;Dbxref=InterPro:IPR005941;Note=HAMAP:MF_01690~dape~succinyl-diaminopimelate desuccinylase%2C proteobacteria;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73941 75045 . + . ID=id-GGE_2122-4;Note=superfamily%3B label: M20_dimer superfamily;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73941 75042 . + . ID=id-GGE_2122-5;Dbxref=InterPro:IPR005941,TIGRFAM:TIGR01246;Note=multi-dom~dape_proteo: succinyl-diaminopimelate des~succinyl-diaminopimelate desuccinylase%2C proteobacteria%3B label: dapE_proteo;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 74115 74862 . + . ID=id-GGE_2122-6;Dbxref=InterPro:IPR002933,PFAM:PF01546;Note=peptidase_m20~peptidase m20;gbkey=misc_feature;gene=dapE;locus_tag=GGE_2122 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 73956 74112 . - . ID=id-AFQR01000041.1:73956..74112;Dbxref=InterPro:IPR001261;Note=PatternScan:PS00758~arge_dape_cpg2_1~arge/dape/acy1/cpg2/yscs%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 74181 74805 . - . ID=id-AFQR01000041.1:74181..74805;Note=Gene3D:3.40.630.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 74250 74460 . - . ID=id-AFQR01000041.1:74250..74460;Dbxref=InterPro:IPR011650,PFAM:PF07687;Note=m20_dimer~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 74259 74472 . - . ID=id-AFQR01000041.1:74259..74472;Dbxref=InterPro:IPR011650;Note=superfamily:SSF55031~bacterial exopeptidase dimerization domain~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 74259 74469 . - . ID=id-AFQR01000041.1:74259..74469;Note=Gene3D:3.30.70.360;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 75067 75747 . + . ID=gene-GGE_2123;Name=GGE_2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2123 GCA_000222085.2|AFQR01000041.1 Genbank CDS 75067 75747 . + 0 ID=cds-EGT79077.1;Parent=gene-GGE_2123;Dbxref=GeneID:148825626,InterPro:IPR003709,PFAM:PF02557,NCBI_GP:EGT79077.1;Name=EGT79077.1;Note=YP_001290379;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||;go_process=proteolysis|0006508||;locus_tag=GGE_2123;product=putative D-alanyl-D-alanine carboxypeptidase;protein_id=EGT79077.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75067 75724 . + . ID=id-GGE_2123;Note=multi-dom%3B label: VanY;gbkey=misc_feature;locus_tag=GGE_2123 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75145 75547 . + . ID=id-GGE_2123-2;Note=superfamily%3B label: VanY superfamily;gbkey=misc_feature;locus_tag=GGE_2123 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75148 75541 . + . ID=id-GGE_2123-3;Dbxref=InterPro:IPR003709,PFAM:PF02557;Note=vany~peptidase m15b/m15c%2C d%2Cd-carboxypeptidase vany/endolysins;gbkey=misc_feature;locus_tag=GGE_2123 GCA_000222085.2|AFQR01000041.1 Genbank gene 75783 76853 . - . ID=gene-GGE_2124;Name=GGE_2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank CDS 75783 76853 . - 0 ID=cds-EGT79078.1;Parent=gene-GGE_2124;Dbxref=InterPro:IPR003439,InterPro:IPR015853,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT79078.1;Name=EGT79078.1;Note=fbpC2;Ontology_term=GO:0006810,GO:0016020,GO:0005524,GO:0016887,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2124;product=Fe3+ ions import ATP-binding protein FbpC 2;protein_id=EGT79078.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75783 76838 . - . ID=id-GGE_2124;Note=VFDB hit~VFDB:VFG0344;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75804 76827 . - . ID=id-GGE_2124-2;Note=multi-dom%3B label: PotA;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75810 76497 . - . ID=id-GGE_2124-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75813 76518 . - . ID=id-GGE_2124-4;Note=HMMPanther:PTHR24220:SF43~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75813 76491 . - . ID=id-GGE_2124-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75819 76488 . - . ID=id-GGE_2124-6;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75819 76434 . - . ID=id-GGE_2124-7;Note=specific~superfamily%3B label: ABC_Carb_Solutes_like;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75936 76152 . - . ID=id-GGE_2124-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_2124 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75819 76233 . + . ID=id-AFQR01000041.1:75819..76233;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75828 76221 . + . ID=id-AFQR01000041.1:75828..76221;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 75946 75955 . + . ID=id-AFQR01000041.1:75946..75955;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76239 76398 . + . ID=id-AFQR01000041.1:76239..76398;Dbxref=InterPro:IPR015853;Note=ProfileScan:PS51242~fbpc~abc transporter%2C ferric cation import%2C fbpc;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 76840 78360 . - . ID=gene-GGE_2125;Name=GGE_2125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank CDS 76840 78360 . - 0 ID=cds-EGT79079.1;Parent=gene-GGE_2125;Dbxref=InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT79079.1;Name=EGT79079.1;Note=fbpB2;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2125;product=Fe3+-transport system permease protein fbpB 2;protein_id=EGT79079.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76840 78242 . - . ID=id-GGE_2125;Note=VFDB hit~VFDB:VFG0343;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76840 76924 . - . ID=id-GGE_2125-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76861 76909 . - . ID=id-GGE_2125-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76864 77530 . - . ID=id-GGE_2125-4;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76996 77386 . - . ID=id-GGE_2125-5;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76996 77383 . - . ID=id-GGE_2125-6;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 77041 77335 . - . ID=id-GGE_2125-7;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_2125 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76870 77653 . + . ID=id-AFQR01000041.1:76870..77653;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76900 77968 . + . ID=id-AFQR01000041.1:76900..77968;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 78274 . + . ID=id-AFQR01000041.1:76909..78274;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 78106 . + . ID=id-AFQR01000041.1:76909..78106;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77887 . + . ID=id-AFQR01000041.1:76909..77887;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77782 . + . ID=id-AFQR01000041.1:76909..77782;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77656 . + . ID=id-AFQR01000041.1:76909..77656;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77485 . + . ID=id-AFQR01000041.1:76909..77485;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77359 . + . ID=id-AFQR01000041.1:76909..77359;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77188 . + . ID=id-AFQR01000041.1:76909..77188;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77110 . + . ID=id-AFQR01000041.1:76909..77110;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 76909 77005 . + . ID=id-AFQR01000041.1:76909..77005;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 77326 77836 . + . ID=id-AFQR01000041.1:77326..77836;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 77392 77770 . + . ID=id-AFQR01000041.1:77392..77770;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 77413 77770 . + . ID=id-AFQR01000041.1:77413..77770;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 77527 77665 . + . ID=id-AFQR01000041.1:77527..77665;Note=Gene3D:1.10.3720.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 78431 79429 . - . ID=gene-GGE_2126;Name=fbpA;gbkey=Gene;gene=fbpA;gene_biotype=protein_coding;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank CDS 78431 79429 . - 0 ID=cds-EGT79080.1;Parent=gene-GGE_2126;Dbxref=InterPro:IPR006059,InterPro:IPR006061,PFAM:PF01547,NCBI_GP:EGT79080.1;Name=EGT79080.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;gene=fbpA;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_2126;product=Iron-utilization periplasmic protein;protein_id=EGT79080.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78431 79294 . - . ID=id-GGE_2126;Note=VFDB hit~VFDB:VFG0342;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78458 78476 . - . ID=id-GGE_2126-2;Note=seg;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78503 79349 . - . ID=id-GGE_2126-3;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78521 79181 . - . ID=id-GGE_2126-4;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78548 79313 . - . ID=id-GGE_2126-5;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78806 78848 . - . ID=id-GGE_2126-6;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=fbpA;locus_tag=GGE_2126 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78485 78791 . + . ID=id-AFQR01000041.1:78485..78791;Dbxref=InterPro:IPR006061;Note=PatternScan:PS01037~sbp_bacterial_1~bacterial extracellular solute-binding family 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 78524 79223 . + . ID=id-AFQR01000041.1:78524..79223;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 79579 81168 . - . ID=gene-GGE_2127;Name=GGE_2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank CDS 79579 81168 . - 0 ID=cds-EGT79081.1;Parent=gene-GGE_2127;Dbxref=GeneID:229845489,InterPro:IPR013217,InterPro:IPR018773,PFAM:PF08242,PFAM:PF10119,NCBI_GP:EGT79081.1;Name=EGT79081.1;Note=ZP_04465618;gbkey=CDS;locus_tag=GGE_2127;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT79081.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79579 80101 . - . ID=id-GGE_2127;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79702 79963 . - . ID=id-GGE_2127-2;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79711 80152 . - . ID=id-GGE_2127-3;Note=HMMPanther:PTHR10108:SF355~bll3586 protein~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79711 79894 . - . ID=id-GGE_2127-4;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79717 79873 . - . ID=id-GGE_2127-5;Dbxref=InterPro:IPR013217,PFAM:PF08242;Note=methyltransf_12~methyltransferase type 12;gbkey=misc_feature;locus_tag=GGE_2127 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 79627 81121 . + . ID=id-AFQR01000041.1:79627..81121;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 80014 80053 . + . ID=id-AFQR01000041.1:80014..80053;Dbxref=InterPro:IPR018773,PFAM:PF10119;Note=superfamily~methytransf_reg~methyltransferase regulatory domain%2C predicted%3B label: MethyTransf_Reg superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 80305 80338 . + . ID=id-AFQR01000041.1:80305..80338;Note=superfamily%3B label: COG4797 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 81303 82385 . + . ID=gene-GGE_2128;Name=GGE_2128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank CDS 81303 82385 . + 0 ID=cds-EGT79082.1;Parent=gene-GGE_2128;Dbxref=GeneID:301155987,InterPro:IPR003714,PFAM:PF02562,NCBI_GP:EGT79082.1;Name=EGT79082.1;Note=CBW15457;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;locus_tag=GGE_2128;product=putative protein with nucleoside triphosphate hydrolase domain-containing protein;protein_id=EGT79082.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81303 82338 . + . ID=id-GGE_2128;Note=multi-dom%3B label: PhoH;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81336 82167 . + . ID=id-GGE_2128-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81483 81492 . + . ID=id-GGE_2128-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81669 81918 . + . ID=id-GGE_2128-4;Note=superfamily%3B label: PhoH superfamily;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81672 81915 . + . ID=id-GGE_2128-5;Dbxref=InterPro:IPR003714,PFAM:PF02562;Note=phoh~phoh-like protein;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81672 81912 . + . ID=id-GGE_2128-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2128 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81336 81771 . - . ID=id-AFQR01000041.1:81336..81771;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 81369 82308 . - . ID=id-AFQR01000041.1:81369..82308;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 82395 82859 . + . ID=gene-GGE_2129;Name=GGE_2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank CDS 82395 82859 . + 0 ID=cds-EGT79083.1;Parent=gene-GGE_2129;Dbxref=GeneID:2495567,InterPro:IPR002036,InterPro:IPR020549,InterPro:IPR023091,PFAM:PF02130,TIGRFAM:TIGR00043,NCBI_GP:EGT79083.1;Name=EGT79083.1;Note=HI_0004;Ontology_term=GO:0046872,GO:0004222;gbkey=CDS;go_function=metal ion binding|0046872||,metalloendopeptidase activity|0004222||;locus_tag=GGE_2129;product=Putative rRNA maturation factor;protein_id=EGT79083.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82395 82851 . + . ID=id-GGE_2129;Note=superfamily:SSF55486~metalloproteases ('zincins')%2C catalytic domain;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82413 82824 . + . ID=id-GGE_2129-2;Dbxref=InterPro:IPR002036;Note=HAMAP:MF_00009~upf0054~uncharacterised protein family upf0054%2C metalloprotease ybey%2C predicted;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82416 82839 . + . ID=id-GGE_2129-3;Note=superfamily%3B label: UPF0054 superfamily;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82431 82815 . + . ID=id-GGE_2129-4;Dbxref=InterPro:IPR023091;Note=Gene3D:3.40.390.30~metalloprotease catalytic domain%2C predicted;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82461 82767 . + . ID=id-GGE_2129-5;Dbxref=InterPro:IPR002036,PFAM:PF02130;Note=upf0054~uncharacterised protein family upf0054%2C metalloprotease ybey%2C predicted;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82512 82716 . + . ID=id-GGE_2129-6;Dbxref=InterPro:IPR002036,TIGRFAM:TIGR00043;Note=tigr00043: metalloprotein%2C ybey/ upf0054fam~uncharacterised protein family upf0054%2C metalloprotease ybey%2C predicted;gbkey=misc_feature;locus_tag=GGE_2129 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82428 82737 . - . ID=id-AFQR01000041.1:82428..82737;Dbxref=InterPro:IPR020549;Note=PatternScan:PS01306~upf0054~uncharacterised protein family upf0054%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82440 82764 . - . ID=id-AFQR01000041.1:82440..82764;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 82878 83663 . + . ID=gene-GGE_2130;Name=GGE_2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank CDS 82878 83663 . + 0 ID=cds-EGT79084.1;Parent=gene-GGE_2130;Dbxref=GeneID:1176309,InterPro:IPR000150,InterPro:IPR001757,InterPro:IPR006379,InterPro:IPR013200,InterPro:IPR023214,PFAM:PF08282,TIGRFAM:TIGR00099,TIGRFAM:TIGR01484,NCBI_GP:EGT79084.1;Name=EGT79084.1;Note=HI_0003;Ontology_term=GO:0006754,GO:0008152,GO:0016020,GO:0005524,GO:0015662,GO:0003824,GO:0016787;gbkey=CDS;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of ions phosphorylative mechanism|0015662||,catalytic activity|0003824||,hydrolase activity|0016787||;go_process=ATP biosynthetic process|0006754||,metabolic process|0008152||;locus_tag=GGE_2130;product=putative hAD superfamily hydrolase-like%2C type 3;protein_id=EGT79084.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82878 83655 . + . ID=id-GGE_2130;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82890 83634 . + . ID=id-GGE_2130-2;Dbxref=InterPro:IPR000150,TIGRFAM:TIGR00099;Note=cof-subfamily: cof-like hydrolase~cof protein;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82890 83553 . + . ID=id-GGE_2130-3;Dbxref=InterPro:IPR006379,TIGRFAM:TIGR01484;Note=had-sf-iib: had hydrolase%2C family iib~had-superfamily hydrolase%2C subfamily iib;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82890 83166 . + . ID=id-GGE_2130-4;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82890 82914 . + . ID=id-GGE_2130-5;Dbxref=InterPro:IPR000150;Note=PatternScan:PS01228~cof_1~cof protein;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82893 83631 . + . ID=id-GGE_2130-6;Note=multi-dom%3B label: Hydrolase_3;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82893 83628 . + . ID=id-GGE_2130-7;Dbxref=InterPro:IPR013200,PFAM:PF08282;Note=hydrolase_3~had superfamily hydrolase-like%2C type 3;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82896 82923 . + . ID=id-GGE_2130-8;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83127 83172 . + . ID=id-GGE_2130-9;Note=Gene3D:3.30.1240.10;gbkey=misc_feature;locus_tag=GGE_2130 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82914 83340 . - . ID=id-AFQR01000041.1:82914..83340;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82917 83574 . - . ID=id-AFQR01000041.1:82917..83574;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82938 83505 . - . ID=id-AFQR01000041.1:82938..83505;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 82947 83505 . - . ID=id-AFQR01000041.1:82947..83505;Dbxref=InterPro:IPR000150;Note=PatternScan:PS01229~cof_2~cof protein;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83067 83442 . - . ID=id-AFQR01000041.1:83067..83442;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83112 83421 . - . ID=id-AFQR01000041.1:83112..83421;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83190 83337 . - . ID=id-AFQR01000041.1:83190..83337;Note=HMMPanther:PTHR21485:SF12~phosphatase yida~HMMPanther:PTHR21485~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 83697 85523 . - . ID=gene-GGE_2131;Name=GGE_2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank CDS 83697 85523 . - 0 ID=cds-EGT79085.1;Parent=gene-GGE_2131;Dbxref=GeneID:1170730,InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,NCBI_GP:EGT79085.1;Name=EGT79085.1;Note=HI_0002;Ontology_term=GO:0008152,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_2131;product=Putative long-chain-fatty-acid--CoA ligase;protein_id=EGT79085.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83697 85521 . - . ID=id-GGE_2131;Note=multi-dom%3B label: FAA1;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83739 85467 . - . ID=id-GGE_2131-2;Note=superfamily:SSF56801~acetyl-coa synthetase-like;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83739 84243 . - . ID=id-GGE_2131-3;Note=Gene3D:3.40.50.980;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83754 85467 . - . ID=id-GGE_2131-4;Note=HMMPanther:PTHR24096:SF10~subfamily not named~HMMPanther:PTHR24096~family not named;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83829 85062 . - . ID=id-GGE_2131-5;Dbxref=InterPro:IPR000873,PFAM:PF00501;Note=amp-binding~amp-dependent synthetase/ligase;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 84009 84117 . - . ID=id-GGE_2131-6;Note=superfamily%3B label: LuxE superfamily;gbkey=misc_feature;locus_tag=GGE_2131 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83733 84267 . + . ID=id-AFQR01000041.1:83733..84267;Dbxref=InterPro:IPR020845;Note=PatternScan:PS00455~amp_binding~amp-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83763 85323 . + . ID=id-AFQR01000041.1:83763..85323;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83865 84714 . + . ID=id-AFQR01000041.1:83865..84714;Note=Gene3D:3.40.50.980;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 83892 84897 . + . ID=id-AFQR01000041.1:83892..84897;Note=Gene3D:2.30.38.10;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 84225 84711 . + . ID=id-AFQR01000041.1:84225..84711;Note=superfamily%3B label: LuxE superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 85694 86713 . - . ID=gene-GGE_2132;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank CDS 85694 86713 . - 0 ID=cds-EGT79086.1;Parent=gene-GGE_2132;Dbxref=GeneID:1169791,InterPro:IPR006424,InterPro:IPR016040,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,PFAM:PF00044,PFAM:PF02800,PIR:PIRSF000149,TIGRFAM:TIGR01534,NCBI_GP:EGT79086.1;Name=EGT79086.1;Ontology_term=GO:0006006,GO:0008152,GO:0055114,GO:0051287,GO:0005488,GO:0003824,GO:0008943,GO:0016620;gbkey=CDS;gene=gapA;go_function=NAD or NADH binding|0051287||,binding|0005488||,catalytic activity|0003824||,glyceraldehyde-3-phosphate dehydrogenase activity|0008943||,oxidoreductase activity acting on the aldehyde or oxo group of donors NAD or NADP as acceptor|0016620||;go_process=glucose metabolic process|0006006||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_2132;product=Glyceraldehyde-3-phosphate dehydrogenase;protein_id=EGT79086.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85694 86711 . - . ID=id-GGE_2132;Dbxref=InterPro:IPR020831,PIR:PIRSF000149;Note=glyceraldehyde-3-phosphate dehydrogenase~glyceraldehyde/erythrose phosphate dehydrogenase family~HMMPanther:PTHR10836~glyceraldehyde 3-phosphate dehydrogenase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85703 86189 . - . ID=id-GGE_2132-2;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85703 86162 . - . ID=id-GGE_2132-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85703 86138 . - . ID=id-GGE_2132-4;Dbxref=InterPro:IPR020828,PFAM:PF00044;Note=gp_dh_n~glyceraldehyde 3-phosphate dehydrogenase%2C nad(p) binding domain;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85706 86672 . - . ID=id-GGE_2132-5;Dbxref=InterPro:IPR006424,TIGRFAM:TIGR01534;Note=gapdh-i: glyceraldehyde-3-phosphate dehydrog~glyceraldehyde-3-phosphate dehydrogenase%2C type i;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85709 85739 . - . ID=id-GGE_2132-6;Note=seg;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85754 86639 . - . ID=id-GGE_2132-7;Note=multi-dom%3B label: gapA;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85754 86087 . - . ID=id-GGE_2132-8;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86144 86201 . - . ID=id-GGE_2132-9;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86159 86183 . - . ID=id-GGE_2132-10;Dbxref=InterPro:IPR020829,PFAM:PF02800;Note=superfamily~gp_dh_c~glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain%3B label: Gp_dh_C superfamily;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86171 86177 . - . ID=id-GGE_2132-11;Note=Gene3D:3.30.360.10;gbkey=misc_feature;gene=gapA;locus_tag=GGE_2132 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85718 86138 . + . ID=id-AFQR01000041.1:85718..86138;Dbxref=InterPro:IPR020830;Note=PatternScan:PS00071~gapdh~glyceraldehyde 3-phosphate dehydrogenase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85733 86216 . + . ID=id-AFQR01000041.1:85733..86216;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85736 86021 . + . ID=id-AFQR01000041.1:85736..86021;Dbxref=InterPro:IPR020831;Note=FPrintScan:PR00078~g3pdhdrgnase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85742 86513 . + . ID=id-AFQR01000041.1:85742..86513;Dbxref=InterPro:IPR020831;Note=FPrintScan:PR00078~g3pdhdrgnase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85745 86207 . + . ID=id-AFQR01000041.1:85745..86207;Dbxref=InterPro:IPR020831;Note=FPrintScan:PR00078~g3pdhdrgnase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85748 86378 . + . ID=id-AFQR01000041.1:85748..86378;Dbxref=InterPro:IPR020831;Note=FPrintScan:PR00078~g3pdhdrgnase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 85751 86126 . + . ID=id-AFQR01000041.1:85751..86126;Dbxref=InterPro:IPR020831;Note=FPrintScan:PR00078~g3pdhdrgnase~glyceraldehyde/erythrose phosphate dehydrogenase family;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86889 86898 . - . ID=id-AFQR01000041.1:86889..86898;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 86964 87590 . + . ID=gene-GGE_2133;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank CDS 86964 87590 . + 0 ID=cds-EGT79087.1;Parent=gene-GGE_2133;Dbxref=GeneID:81335238,InterPro:IPR008144,InterPro:IPR017665,InterPro:IPR020590,PFAM:PF00625,TIGRFAM:TIGR03263,NCBI_GP:EGT79087.1;Name=EGT79087.1;Ontology_term=GO:0006163,GO:0004385,GO:0005515;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||,protein binding|0005515||;go_process=purine nucleotide metabolic process|0006163||;locus_tag=GGE_2133;product=Guanylate kinase;protein_id=EGT79087.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86964 87564 . + . ID=id-GGE_2133;Note=HMMPanther:PTHR23117~family not named;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86970 87525 . + . ID=id-GGE_2133-2;Dbxref=InterPro:IPR017665;Note=HAMAP:MF_00328~guanylate_kinase~guanylate kinase%2C sub-group;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86973 87528 . + . ID=id-GGE_2133-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86976 87516 . + . ID=id-GGE_2133-4;Dbxref=InterPro:IPR008144,PFAM:PF00625;Note=guanylate_kin~guanylate kinase;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86976 87513 . + . ID=id-GGE_2133-5;Dbxref=InterPro:IPR017665,TIGRFAM:TIGR03263;Note=guanyl_kin: guanylate kinase~guanylate kinase%2C sub-group;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 86976 87510 . + . ID=id-GGE_2133-6;Dbxref=InterPro:IPR008144;Note=ProfileScan:PS50052~guanylate_kinase_2~guanylate kinase;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87003 87018 . + . ID=id-GGE_2133-7;Note=seg;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87069 87150 . + . ID=id-GGE_2133-8;Note=Gene3D:3.30.63.10;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87072 87399 . + . ID=id-GGE_2133-9;Note=specific~superfamily%3B label: GMPK;gbkey=misc_feature;gene=gmk;locus_tag=GGE_2133 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87000 87339 . - . ID=id-AFQR01000041.1:87000..87339;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87018 87084 . - . ID=id-AFQR01000041.1:87018..87084;Dbxref=InterPro:IPR020590;Note=PatternScan:PS00856~guanylate_kinase_1~guanylate kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87240 87255 . - . ID=id-AFQR01000041.1:87240..87255;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 87653 87919 . + . ID=gene-GGE_2134;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank CDS 87653 87919 . + 0 ID=cds-EGT79088.1;Parent=gene-GGE_2134;Dbxref=GeneID:1173169,InterPro:IPR003716,InterPro:IPR006110,InterPro:IPR012293,PFAM:PF01192,TIGRFAM:TIGR00690,NCBI_GP:EGT79088.1;Name=EGT79088.1;Ontology_term=GO:0006351,GO:0030880,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoZ;go_component=RNA polymerase complex|0030880||;go_function=DNA binding|0003677||,DNA-directed RNA polymerase activity|0003899||;go_process=transcription DNA-dependent|0006351||;locus_tag=GGE_2134;product=DNA-directed RNA polymerase subunit omega;protein_id=EGT79088.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87653 87905 . + . ID=id-GGE_2134;Dbxref=InterPro:IPR006110;Note=superfamily:SSF63562~rpb6/omega subunit-like~rna polymerase%2C subunit omega/k/rpabc2;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87653 87890 . + . ID=id-GGE_2134-2;Dbxref=InterPro:IPR012293;Note=Gene3D:3.90.940.10~rna polymerase subunit%2C rpb6/omega;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87653 87851 . + . ID=id-GGE_2134-3;Dbxref=InterPro:IPR003716,TIGRFAM:TIGR00690;Note=rpoz: dna-directed rna polymerase%2C omega sub~dna-directed rna polymerase%2C omega subunit;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87653 87839 . + . ID=id-GGE_2134-4;Dbxref=InterPro:IPR003716;Note=HAMAP:MF_00366~rnapol_bact_rpoz~dna-directed rna polymerase%2C omega subunit;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87653 87833 . + . ID=id-GGE_2134-5;Note=superfamily%3B label: RNA_pol_Rpb6 superfamily;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87674 87824 . + . ID=id-GGE_2134-6;Dbxref=InterPro:IPR006110,PFAM:PF01192;Note=rna_pol_rpb6~rna polymerase%2C subunit omega/k/rpabc2;gbkey=misc_feature;gene=rpoZ;locus_tag=GGE_2134 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87926 87935 . + . ID=id-AFQR01000041.1:87926..87935;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87955 87964 . - . ID=id-AFQR01000041.1:87955..87964;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 87992 90100 . + . ID=gene-GGE_2135;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank CDS 87992 90100 . + 0 ID=cds-EGT79089.1;Parent=gene-GGE_2135;Dbxref=GeneID:1174427,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR006674,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,PFAM:PF01966,PFAM:PF02824,PFAM:PF04607,TIGRFAM:TIGR00691,NCBI_GP:EGT79089.1;Name=EGT79089.1;Ontology_term=GO:0015969;gbkey=CDS;gene=spoT;go_process=guanosine tetraphosphate metabolic process|0015969||;locus_tag=GGE_2135;product=putative pyrophosphohydrolase-like protein;protein_id=EGT79089.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 87992 88565 . + . ID=id-GGE_2135;Note=superfamily:SSF109604~hd-domain/pdease-like;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88001 90086 . + . ID=id-GGE_2135-2;Note=multi-dom%3B label: PRK11092;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88052 90035 . + . ID=id-GGE_2135-3;Note=HMMPanther:PTHR21262~family not named;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88070 90008 . + . ID=id-GGE_2135-4;Dbxref=InterPro:IPR004811,TIGRFAM:TIGR00691;Note=spot_rela: rela/spot family protein~rela/spot protein;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88127 88292 . + . ID=id-GGE_2135-5;Dbxref=InterPro:IPR006674,PFAM:PF01966;Note=superfamily~hd~metal-dependent phosphohydrolase%2C hd subdomain%3B label: HDc superfamily;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88532 88634 . + . ID=id-GGE_2135-6;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88651 88660 . + . ID=id-GGE_2135-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 89843 89852 . + . ID=id-GGE_2135-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=spoT;locus_tag=GGE_2135 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88019 89966 . - . ID=id-AFQR01000041.1:88019..89966;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88037 89528 . - . ID=id-AFQR01000041.1:88037..89528;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88058 88577 . - . ID=id-AFQR01000041.1:88058..88577;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88172 89159 . - . ID=id-AFQR01000041.1:88172..89159;Dbxref=InterPro:IPR004095,PFAM:PF02824;Note=specific~superfamily~tgs~tgs%3B label: TGS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88178 89156 . - . ID=id-AFQR01000041.1:88178..89156;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88205 89873 . - . ID=id-AFQR01000041.1:88205..89873;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88214 89120 . - . ID=id-AFQR01000041.1:88214..89120;Dbxref=InterPro:IPR012676;Note=superfamily:SSF81271~tgs-like~tgs-like;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88322 88697 . - . ID=id-AFQR01000041.1:88322..88697;Dbxref=InterPro:IPR007685,PFAM:PF04607;Note=rela_spot~rela/spot;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 88352 88634 . - . ID=id-AFQR01000041.1:88352..88634;Note=specific~superfamily%3B label: NT_Pol-beta-like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 90097 92178 . + . ID=gene-GGE_2136;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank CDS 90097 92178 . + 0 ID=cds-EGT79090.1;Parent=gene-GGE_2136;Dbxref=GeneID:1172894,InterPro:IPR001650,InterPro:IPR004365,InterPro:IPR004609,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR016027,PFAM:PF00270,PFAM:PF00271,PFAM:PF01336,TIGRFAM:TIGR00643,NCBI_GP:EGT79090.1;Name=EGT79090.1;Ontology_term=GO:0006310,GO:0006281,GO:0005524,GO:0004003,GO:0008026,GO:0004386,GO:0003676;gbkey=CDS;gene=recG;go_function=ATP binding|0005524||,ATP-dependent DNA helicase activity|0004003||,ATP-dependent helicase activity|0008026||,helicase activity|0004386||,nucleic acid binding|0003676||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_2136;product=ATP-dependent DNA helicase recG;protein_id=EGT79090.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90097 92176 . + . ID=id-GGE_2136;Note=multi-dom%3B label: PRK10917;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90097 90634 . + . ID=id-GGE_2136-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90109 90199 . + . ID=id-GGE_2136-3;Note=Gene3D:1.10.150.20;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90181 92011 . + . ID=id-GGE_2136-4;Dbxref=InterPro:IPR004609,TIGRFAM:TIGR00643;Note=recg: atp-dependent dna helicase recg~dna helicase%2C atp-dependent%2C recg;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90205 92062 . + . ID=id-GGE_2136-5;Note=HMMPanther:PTHR24031:SF174~subfamily not named~HMMPanther:PTHR24031~family not named;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90286 90319 . + . ID=id-GGE_2136-6;Note=specific~superfamily%3B label: RecG_wedge_OBF;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90286 90316 . + . ID=id-GGE_2136-7;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90496 91015 . + . ID=id-GGE_2136-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90655 90901 . + . ID=id-GGE_2136-9;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90807 90816 . + . ID=id-GGE_2136-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90964 91213 . + . ID=id-GGE_2136-11;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recG;locus_tag=GGE_2136 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90307 91654 . - . ID=id-AFQR01000041.1:90307..91654;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90514 91474 . - . ID=id-AFQR01000041.1:90514..91474;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90514 90973 . - . ID=id-AFQR01000041.1:90514..90973;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90538 91543 . - . ID=id-AFQR01000041.1:90538..91543;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90586 90910 . - . ID=id-AFQR01000041.1:90586..90910;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90595 90946 . - . ID=id-AFQR01000041.1:90595..90946;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 90673 91456 . - . ID=id-AFQR01000041.1:90673..91456;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92177 92186 . + . ID=id-AFQR01000041.1:92177..92186;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 92208 93017 . + . ID=gene-GGE_2137;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank CDS 92208 93017 . + 0 ID=cds-EGT79091.1;Parent=gene-GGE_2137;Dbxref=InterPro:IPR001920,InterPro:IPR004391,InterPro:IPR015942,InterPro:IPR018187,PFAM:PF01177,TIGRFAM:TIGR00067,NCBI_GP:EGT79091.1;Name=EGT79091.1;Ontology_term=GO:0008152,GO:0009252,GO:0008881,GO:0016855;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||,racemase and epimerase activity acting on amino acids and derivatives|0016855||;go_process=metabolic process|0008152||,peptidoglycan biosynthetic process|0009252||;locus_tag=GGE_2137;product=Glutamate racemase;protein_id=EGT79091.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92226 92994 . + . ID=id-GGE_2137;Note=superfamily%3B label: Asp_Glu_race superfamily;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92229 92889 . + . ID=id-GGE_2137-2;Note=HMMPanther:PTHR21198~family not named;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92232 92970 . + . ID=id-GGE_2137-3;Dbxref=InterPro:IPR004391,TIGRFAM:TIGR00067;Note=glut_race: glutamate racemase~glutamate racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92232 92964 . + . ID=id-GGE_2137-4;Dbxref=InterPro:IPR004391;Note=HAMAP:MF_00258~glu_racemase~glutamate racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92232 92718 . + . ID=id-GGE_2137-5;Dbxref=InterPro:IPR001920;Note=Gene3D:3.40.50.1860~asp/glu racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92232 92523 . + . ID=id-GGE_2137-6;Dbxref=InterPro:IPR001920;Note=superfamily:SSF53681~aspartate/glutamate racemase~asp/glu racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92241 92835 . + . ID=id-GGE_2137-7;Dbxref=InterPro:IPR015942,PFAM:PF01177;Note=asp_glu_race~asp/glu/hydantoin racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92547 92679 . + . ID=id-GGE_2137-8;Dbxref=InterPro:IPR001920;Note=superfamily:SSF53681~aspartate/glutamate racemase~asp/glu racemase;gbkey=misc_feature;gene=murI;locus_tag=GGE_2137 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92235 92433 . - . ID=id-AFQR01000041.1:92235..92433;Dbxref=InterPro:IPR018187;Note=PatternScan:PS00923~asp_glu_racemase_1~asp/glu racemase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92241 92763 . - . ID=id-AFQR01000041.1:92241..92763;Dbxref=InterPro:IPR018187;Note=PatternScan:PS00924~asp_glu_racemase_2~asp/glu racemase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 92373 92382 . - . ID=id-AFQR01000041.1:92373..92382;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000041.1 Genbank gene 93230 94375 . + . ID=gene-GGE_2138;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank CDS 93230 94375 . + 0 ID=cds-EGT79092.1;Parent=gene-GGE_2138;Dbxref=GeneID:166990704,InterPro:IPR000262,InterPro:IPR008259,InterPro:IPR012133,InterPro:IPR013785,InterPro:IPR020920,PFAM:PF01070,PIR:PIRSF000138,NCBI_GP:EGT79092.1;Name=EGT79092.1;Ontology_term=GO:0006089,GO:0008152,GO:0055114,GO:0010181,GO:0004460,GO:0003824,GO:0016491;gbkey=CDS;gene=lldD;go_function=FMN binding|0010181||,L-lactate dehydrogenase (cytochrome) activity|0004460||,catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=lactate metabolic process|0006089||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_2138;product=L-lactate dehydrogenase cytochrome;protein_id=EGT79092.1;transl_table=11 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93230 94373 . + . ID=id-GGE_2138;Note=multi-dom%3B label: lldD;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93230 94370 . + . ID=id-GGE_2138-2;Dbxref=InterPro:IPR012133,InterPro:IPR020920;Note=ProfileScan:PS51349~fmn_hydroxy_acid_dh_2~alpha-hydroxy acid dehydrogenase%2C fmn-dependent~HAMAP:MF_01559~l_lact_dehydr~l-lactate dehydrogenase [cytochrome];gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93236 94367 . + . ID=id-GGE_2138-3;Dbxref=InterPro:IPR012133,PIR:PIRSF000138;Note=alpha-hydroxy acid dehydrogenase%2C fmn-dependent~alpha-hydroxy acid dehydrogenase%2C fmn-dependent;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93236 94355 . + . ID=id-GGE_2138-4;Note=superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93245 94346 . + . ID=id-GGE_2138-5;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93245 94343 . + . ID=id-GGE_2138-6;Note=superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93254 94337 . + . ID=id-GGE_2138-7;Note=HMMPanther:PTHR10578:SF8~l-lactate dehydrogenase~HMMPanther:PTHR10578~(s)-2-hydroxy-acid oxidase-related;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93269 94319 . + . ID=id-GGE_2138-8;Dbxref=InterPro:IPR000262,PFAM:PF01070;Note=fmn_dh~fmn-dependent dehydrogenase;gbkey=misc_feature;gene=lldD;locus_tag=GGE_2138 GCA_000222085.2|AFQR01000041.1 Genbank sequence_feature 93251 94049 . - . ID=id-AFQR01000041.1:93251..94049;Dbxref=InterPro:IPR008259;Note=PatternScan:PS00557~fmn_hydroxy_acid_dh_1~fmn-dependent alpha-hydroxy acid dehydrogenase%2C active site;gbkey=misc_feature ##sequence-region AFQR01000040.1 1 45607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000040.1 Genbank region 1 45607 . + . ID=AFQR01000040.1:1..45607;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000040.1 Genbank gene 79 447 . - . ID=gene-GGE_2010;Name=GGE_2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2010 GCA_000222085.2|AFQR01000040.1 Genbank CDS 79 447 . - 0 ID=cds-EGT79223.1;Parent=gene-GGE_2010;Dbxref=InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT79223.1;Name=EGT79223.1;Note=Hypothetical transposase IS200-like;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_2010;product=putative transposase IS200-like protein;protein_id=EGT79223.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 94 427 . - . ID=id-GGE_2010;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2010 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 97 427 . - . ID=id-GGE_2010-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2010 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 124 403 . - . ID=id-GGE_2010-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_2010 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 127 397 . - . ID=id-GGE_2010-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2010 GCA_000222085.2|AFQR01000040.1 Genbank gene 582 2267 . - . ID=gene-GGE_2011;Name=GGE_2011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2011 GCA_000222085.2|AFQR01000040.1 Genbank CDS 582 2267 . - 0 ID=cds-EGT79224.1;Parent=gene-GGE_2011;Dbxref=InterPro:IPR006335,InterPro:IPR007370,InterPro:IPR011095,InterPro:IPR011761,InterPro:IPR013815,PFAM:PF04262,PFAM:PF07478,NCBI_GP:EGT79224.1;Name=EGT79224.1;Note=Hypothetical aTP-grasp fold%2C subdomain 1;Ontology_term=GO:0006750,GO:0005524,GO:0008716,GO:0003824,GO:0004357;gbkey=CDS;go_function=ATP binding|0005524||,D-alanine-D-alanine ligase activity|0008716||,catalytic activity|0003824||,glutamate-cysteine ligase activity|0004357||;go_process=glutathione biosynthetic process|0006750||;locus_tag=GGE_2011;product=putative aTP-grasp fold%2C subdomain 1;protein_id=EGT79224.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 582 2265 . - . ID=id-GGE_2011;Dbxref=InterPro:IPR006335;Note=HAMAP:MF_00782~glut_biosynth~glutamate--cysteine ligase-related;gbkey=misc_feature;locus_tag=GGE_2011 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 582 1917 . - . ID=id-GGE_2011-2;Note=superfamily%3B label: Glu_cys_ligase superfamily;gbkey=misc_feature;locus_tag=GGE_2011 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 588 1863 . - . ID=id-GGE_2011-3;Note=superfamily:SSF55931~glutamine synthetase/guanido kinase;gbkey=misc_feature;locus_tag=GGE_2011 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 588 1488 . - . ID=id-GGE_2011-4;Dbxref=InterPro:IPR007370,PFAM:PF04262;Note=glu_cys_ligase~glutamate--cysteine ligase;gbkey=misc_feature;locus_tag=GGE_2011 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 609 1167 . + . ID=id-AFQR01000040.1:609..1167;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 810 1983 . + . ID=id-AFQR01000040.1:810..1983;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 849 1995 . + . ID=id-AFQR01000040.1:849..1995;Dbxref=InterPro:IPR011095,PFAM:PF07478;Note=dala_dala_lig_c~d-alanine--d-alanine ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 873 1974 . + . ID=id-AFQR01000040.1:873..1974;Note=superfamily%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 879 1968 . + . ID=id-AFQR01000040.1:879..1968;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 888 1956 . + . ID=id-AFQR01000040.1:888..1956;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 2550 3263 . - . ID=gene-GGE_2012;Name=GGE_2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2012 GCA_000222085.2|AFQR01000040.1 Genbank CDS 2550 3263 . - 0 ID=cds-EGT79225.1;Parent=gene-GGE_2012;Dbxref=GeneID:1175083,InterPro:IPR005496,PFAM:PF03741,NCBI_GP:EGT79225.1;Name=EGT79225.1;Note=HI_0056;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_2012;product=UPF0053 protein;protein_id=EGT79225.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2550 3261 . - . ID=id-GGE_2012;Note=superfamily%3B label: TerC superfamily;gbkey=misc_feature;locus_tag=GGE_2012 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2595 2619 . - . ID=id-GGE_2012-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2012 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2598 3117 . - . ID=id-GGE_2012-3;Dbxref=InterPro:IPR005496,PFAM:PF03741;Note=terc~integral membrane protein terc;gbkey=misc_feature;locus_tag=GGE_2012 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2583 2817 . + . ID=id-AFQR01000040.1:2583..2817;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2604 3189 . + . ID=id-AFQR01000040.1:2604..3189;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2604 3108 . + . ID=id-AFQR01000040.1:2604..3108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2610 2802 . + . ID=id-AFQR01000040.1:2610..2802;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2610 2700 . + . ID=id-AFQR01000040.1:2610..2700;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2619 3003 . + . ID=id-AFQR01000040.1:2619..3003;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 2619 2922 . + . ID=id-AFQR01000040.1:2619..2922;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 3361 5190 . - . ID=gene-GGE_2013;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank CDS 3361 5190 . - 0 ID=cds-EGT79226.1;Parent=gene-GGE_2013;Dbxref=GeneID:81336965,InterPro:IPR000305,InterPro:IPR001162,InterPro:IPR001943,InterPro:IPR004791,InterPro:IPR009055,InterPro:IPR010994,PFAM:PF01541,PFAM:PF02151,PFAM:PF08459,TIGRFAM:TIGR00194,NCBI_GP:EGT79226.1;Name=EGT79226.1;Ontology_term=GO:0006281,GO:0006289,GO:0005737,GO:0009380,GO:0005622,GO:0003677,GO:0009381,GO:0004518;gbkey=CDS;gene=uvrC;go_component=cytoplasm|0005737||,excinuclease repair complex|0009380||,intracellular|0005622||;go_function=DNA binding|0003677||,excinuclease ABC activity|0009381||,nuclease activity|0004518||;go_process=DNA repair|0006281||,nucleotide-excision repair|0006289||;locus_tag=GGE_2013;product=UvrABC system protein C;protein_id=EGT79226.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3361 5188 . - . ID=id-GGE_2013;Note=multi-dom%3B label: uvrC;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3361 5176 . - . ID=id-GGE_2013-2;Dbxref=InterPro:IPR004791;Note=HAMAP:MF_00203~uvrc~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3373 5113 . - . ID=id-GGE_2013-3;Dbxref=InterPro:IPR004791,TIGRFAM:TIGR00194;Note=uvrc: excinuclease abc subunit c~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3400 3616 . - . ID=id-GGE_2013-4;Dbxref=InterPro:IPR000305;Note=superfamily:SSF82771~giy-yig endonuclease~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3403 3622 . - . ID=id-GGE_2013-5;Dbxref=InterPro:IPR000305;Note=Gene3D:3.40.1440.10~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3403 3607 . - . ID=id-GGE_2013-6;Note=superfamily%3B label: GIY-YIG superfamily;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3406 5137 . - . ID=id-GGE_2013-7;Note=HMMPanther:PTHR11107:SF11~subfamily not named~HMMPanther:PTHR11107~family not named;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3406 3592 . - . ID=id-GGE_2013-8;Dbxref=InterPro:IPR000305;Note=ProfileScan:PS50164~uvrc_1~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3406 3589 . - . ID=id-GGE_2013-9;Dbxref=InterPro:IPR000305,PFAM:PF01541;Note=giy-yig~excinuclease abc%2C c subunit;gbkey=misc_feature;gene=uvrC;locus_tag=GGE_2013 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3403 3556 . + . ID=id-AFQR01000040.1:3403..3556;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3424 3991 . + . ID=id-AFQR01000040.1:3424..3991;Note=superfamily%3B label: UVR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3430 3991 . + . ID=id-AFQR01000040.1:3430..3991;Dbxref=InterPro:IPR001943,PFAM:PF02151;Note=uvr~uvrb/uvrc protein;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3469 3964 . + . ID=id-AFQR01000040.1:3469..3964;Dbxref=InterPro:IPR001943;Note=ProfileScan:PS50151~uvr~uvrb/uvrc protein;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3523 5023 . + . ID=id-AFQR01000040.1:3523..5023;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3529 3919 . + . ID=id-AFQR01000040.1:3529..3919;Dbxref=InterPro:IPR009055;Note=superfamily:SSF46600~c-terminal uvrc-binding domain of uvrb~uvrb uvrc-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3544 3901 . + . ID=id-AFQR01000040.1:3544..3901;Note=Gene3D:4.10.860.10;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3646 4900 . + . ID=id-AFQR01000040.1:3646..4900;Dbxref=InterPro:IPR010994;Note=superfamily:SSF47781~ruva domain 2-like~ruva domain 2-like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3838 4507 . + . ID=id-AFQR01000040.1:3838..4507;Dbxref=InterPro:IPR001162,PFAM:PF08459;Note=uvrc_hhh_n~excinuclease abc%2C c subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 3841 4504 . + . ID=id-AFQR01000040.1:3841..4504;Note=superfamily%3B label: UvrC_HhH_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 4039 4117 . + . ID=id-AFQR01000040.1:4039..4117;Dbxref=InterPro:IPR001162;Note=ProfileScan:PS50165~uvrc_2~excinuclease abc%2C c subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 5192 5956 . - . ID=gene-GGE_2014;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank CDS 5192 5956 . - 0 ID=cds-EGT79227.1;Parent=gene-GGE_2014;Dbxref=GeneID:1170638,InterPro:IPR003329,InterPro:IPR004528,PFAM:PF02348,TIGRFAM:TIGR00466,NCBI_GP:EGT79227.1;Name=EGT79227.1;Ontology_term=GO:0009103,GO:0005737,GO:0008690;gbkey=CDS;gene=kdsB;go_component=cytoplasm|0005737||;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_2014;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=EGT79227.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5192 5951 . - . ID=id-GGE_2014;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5192 5948 . - . ID=id-GGE_2014-2;Dbxref=InterPro:IPR004528;Note=HAMAP:MF_00057~cmp_kdo_synth~3-deoxy-d-manno-octulosonate cytidylyltransferase;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5192 5945 . - . ID=id-GGE_2014-3;Note=HMMPanther:PTHR21485:SF4~cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase~HMMPanther:PTHR21485~family not named;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5192 5927 . - . ID=id-GGE_2014-4;Dbxref=InterPro:IPR004528,TIGRFAM:TIGR00466;Note=kdsb: 3-deoxy-d-manno-octulosonate cytidylyl~3-deoxy-d-manno-octulosonate cytidylyltransferase;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5198 5942 . - . ID=id-GGE_2014-5;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5198 5939 . - . ID=id-GGE_2014-6;Note=specific~superfamily%3B label: CMP-KDO-Synthetase;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5207 5855 . - . ID=id-GGE_2014-7;Dbxref=InterPro:IPR003329,PFAM:PF02348;Note=ctp_transf_3~acylneuraminate cytidylyltransferase;gbkey=misc_feature;gene=kdsB;locus_tag=GGE_2014 GCA_000222085.2|AFQR01000040.1 Genbank gene 5960 6145 . - . ID=gene-GGE_2015;Name=GGE_2015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2015 GCA_000222085.2|AFQR01000040.1 Genbank CDS 5960 6145 . - 0 ID=cds-EGT79228.1;Parent=gene-GGE_2015;Dbxref=GeneID:301155978,InterPro:IPR005651,PFAM:PF03966,NCBI_GP:EGT79228.1;Name=EGT79228.1;Note=CBW15448;gbkey=CDS;locus_tag=GGE_2015;product=hypothetical protein;protein_id=EGT79228.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5975 6122 . - . ID=id-GGE_2015;Dbxref=InterPro:IPR005651;Note=HAMAP:MF_01187~upf0434~uncharacterised protein family upf0434/trm112;gbkey=misc_feature;locus_tag=GGE_2015 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5981 6077 . - . ID=id-GGE_2015-2;Dbxref=InterPro:IPR005651,PFAM:PF03966;Note=trm112p~uncharacterised protein family upf0434/trm112;gbkey=misc_feature;locus_tag=GGE_2015 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5984 6122 . - . ID=id-GGE_2015-3;Note=superfamily%3B label: Trm112p superfamily;gbkey=misc_feature;locus_tag=GGE_2015 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 5996 6107 . - . ID=id-GGE_2015-4;Note=Gene3D:2.20.25.10;gbkey=misc_feature;locus_tag=GGE_2015 GCA_000222085.2|AFQR01000040.1 Genbank gene 6138 7136 . - . ID=gene-GGE_2016;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank CDS 6138 7136 . - 0 ID=cds-EGT79229.1;Parent=gene-GGE_2016;Dbxref=GeneID:1175608,InterPro:IPR003758,PFAM:PF02606,TIGRFAM:TIGR00682,NCBI_GP:EGT79229.1;Name=EGT79229.1;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;gene=lpxK;go_function=ATP binding|0005524||,tetraacyldisaccharide 4'-kinase activity|0009029||;go_process=lipid A biosynthetic process|0009245||;locus_tag=GGE_2016;product=putative kinase-like protein;protein_id=EGT79229.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6138 7119 . - . ID=id-GGE_2016;Note=superfamily%3B label: LpxK superfamily;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6159 7101 . - . ID=id-GGE_2016-2;Dbxref=InterPro:IPR003758;Note=HAMAP:MF_00409~lpxk~tetraacyldisaccharide 4'-kinase;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6168 6207 . - . ID=id-GGE_2016-3;Note=transmembrane_regions;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6168 6183 . - . ID=id-GGE_2016-4;Note=seg;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6171 7032 . - . ID=id-GGE_2016-5;Dbxref=InterPro:IPR003758,PFAM:PF02606;Note=lpxk~tetraacyldisaccharide 4'-kinase;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6189 7083 . - . ID=id-GGE_2016-6;Dbxref=InterPro:IPR003758,TIGRFAM:TIGR00682;Note=lpxk: tetraacyldisaccharide 4'-kinase~tetraacyldisaccharide 4'-kinase;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6213 7059 . - . ID=id-GGE_2016-7;Note=multi-dom%3B label: lpxK;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6267 6630 . - . ID=id-GGE_2016-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=lpxK;locus_tag=GGE_2016 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 6207 6273 . + . ID=id-AFQR01000040.1:6207..6273;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 7209 8972 . - . ID=gene-GGE_2017;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank CDS 7209 8972 . - 0 ID=cds-EGT79230.1;Parent=gene-GGE_2017;Dbxref=GeneID:81336962,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR011917,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,TIGRFAM:TIGR02203,NCBI_GP:EGT79230.1;Name=EGT79230.1;Ontology_term=GO:0006869,GO:0055085,GO:0006810,GO:0016021,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;gene=msbA;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=lipid transport|0006869||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_2017;product=Lipid A export ATP-binding/permease protein MsbA;protein_id=EGT79230.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7209 8202 . - . ID=id-GGE_2017;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7224 8958 . - . ID=id-GGE_2017-2;Note=multi-dom%3B label: PRK11176;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7245 8931 . - . ID=id-GGE_2017-3;Dbxref=InterPro:IPR011917;Note=ProfileScan:PS51239~msba~abc transporter%2C lipid a export%2C msba;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7254 8925 . - . ID=id-GGE_2017-4;Note=HMMPanther:PTHR24221:SF91~subfamily not named~HMMPanther:PTHR24221~family not named;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7257 8925 . - . ID=id-GGE_2017-5;Dbxref=InterPro:IPR011917,TIGRFAM:TIGR02203;Note=msba_lipida: lipid a export permease/atp-~abc transporter%2C lipid a export%2C msba;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7260 8157 . - . ID=id-GGE_2017-6;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7305 8061 . - . ID=id-GGE_2017-7;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7308 8022 . - . ID=id-GGE_2017-8;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=superfamily~abc_membrane~abc transporter%2C transmembrane domain%3B label: ABC_membrane superfamily;gbkey=misc_feature;gene=msbA;locus_tag=GGE_2017 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7239 8688 . + . ID=id-AFQR01000040.1:7239..8688;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7254 8667 . + . ID=id-AFQR01000040.1:7254..8667;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7257 7998 . + . ID=id-AFQR01000040.1:7257..7998;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7260 8568 . + . ID=id-AFQR01000040.1:7260..8568;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7278 7983 . + . ID=id-AFQR01000040.1:7278..7983;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7278 7722 . + . ID=id-AFQR01000040.1:7278..7722;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7278 7641 . + . ID=id-AFQR01000040.1:7278..7641;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7278 7425 . + . ID=id-AFQR01000040.1:7278..7425;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7278 7299 . + . ID=id-AFQR01000040.1:7278..7299;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7590 8373 . + . ID=id-AFQR01000040.1:7590..8373;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7905 8250 . + . ID=id-AFQR01000040.1:7905..8250;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7914 8250 . + . ID=id-AFQR01000040.1:7914..8250;Note=specific~superfamily%3B label: ABCC_MsbA;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7920 8250 . + . ID=id-AFQR01000040.1:7920..8250;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 7941 8187 . + . ID=id-AFQR01000040.1:7941..8187;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 9013 11379 . - . ID=gene-GGE_2018;Name=GGE_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank CDS 9013 11379 . - 0 ID=cds-EGT79231.1;Parent=gene-GGE_2018;Dbxref=GeneID:301168654,InterPro:IPR001279,InterPro:IPR004477,InterPro:IPR004797,PFAM:PF00753,PFAM:PF03772,TIGRFAM:TIGR00360,TIGRFAM:TIGR00361,NCBI_GP:EGT79231.1;Name=EGT79231.1;Note=CBW28245;Ontology_term=GO:0030420,GO:0016021,GO:0016787;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=hydrolase activity|0016787||;go_process=establishment of competence for transformation|0030420||;locus_tag=GGE_2018;product=conserved inner membrane protein;protein_id=EGT79231.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9022 9091 . - . ID=id-GGE_2018;Note=seg;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9028 9067 . - . ID=id-GGE_2018-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9136 9145 . - . ID=id-GGE_2018-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9223 11071 . - . ID=id-GGE_2018-4;Dbxref=InterPro:IPR004797,TIGRFAM:TIGR00361;Note=comec_rec2: dna internalization-related~competence protein comec/rec2;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9226 11068 . - . ID=id-GGE_2018-5;Note=multi-dom%3B label: ComEC_Rec2;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9625 9835 . - . ID=id-GGE_2018-6;Note=superfamily%3B label: Competence superfamily;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9625 9823 . - . ID=id-GGE_2018-7;Dbxref=InterPro:IPR004477,PFAM:PF03772;Note=competence~comec/rec2-related protein;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 10283 10292 . - . ID=id-GGE_2018-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 10864 10873 . - . ID=id-GGE_2018-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2018 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9073 10537 . + . ID=id-AFQR01000040.1:9073..10537;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9073 10288 . + . ID=id-AFQR01000040.1:9073..10288;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 10375 . + . ID=id-AFQR01000040.1:9082..10375;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 10207 . + . ID=id-AFQR01000040.1:9082..10207;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 10111 . + . ID=id-AFQR01000040.1:9082..10111;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 10006 . + . ID=id-AFQR01000040.1:9082..10006;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 9925 . + . ID=id-AFQR01000040.1:9082..9925;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 9799 . + . ID=id-AFQR01000040.1:9082..9799;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 9688 . + . ID=id-AFQR01000040.1:9082..9688;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9082 9091 . + . ID=id-AFQR01000040.1:9082..9091;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9100 9109 . + . ID=id-AFQR01000040.1:9100..9109;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9106 10117 . + . ID=id-AFQR01000040.1:9106..10117;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9493 9502 . + . ID=id-AFQR01000040.1:9493..9502;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9556 10642 . + . ID=id-AFQR01000040.1:9556..10642;Dbxref=InterPro:IPR001279,PFAM:PF00753;Note=lactamase_b~beta-lactamase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9583 9688 . + . ID=id-AFQR01000040.1:9583..9688;Dbxref=InterPro:IPR004477,TIGRFAM:TIGR00360;Note=comec_n-term: comec/rec2-related protein~comec/rec2-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9655 10609 . + . ID=id-AFQR01000040.1:9655..10609;Note=Gene3D:3.60.15.10;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9763 10603 . + . ID=id-AFQR01000040.1:9763..10603;Note=superfamily:SSF56281~metallo-hydrolase/oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 9781 10582 . + . ID=id-AFQR01000040.1:9781..10582;Note=superfamily%3B label: Lactamase_B superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 11639 12076 . + . ID=gene-GGE_2019;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=GGE_2019 GCA_000222085.2|AFQR01000040.1 Genbank CDS 11639 12076 . + 0 ID=cds-EGT79232.1;Parent=gene-GGE_2019;Dbxref=GeneID:1169349,InterPro:IPR000962,InterPro:IPR012784,InterPro:IPR020458,PFAM:PF01258,TIGRFAM:TIGR02420,NCBI_GP:EGT79232.1;Name=EGT79232.1;Ontology_term=GO:0008270;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||;locus_tag=GGE_2019;product=DnaK suppressor protein;protein_id=EGT79232.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11639 11951 . + . ID=id-GGE_2019;Note=superfamily:SSF109635~dnak suppressor protein dksa%2C alpha-hairpin domain;gbkey=misc_feature;gene=dksA;locus_tag=GGE_2019 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11651 12065 . + . ID=id-GGE_2019-2;Note=superfamily%3B label: zf-dskA_traR superfamily;gbkey=misc_feature;gene=dksA;locus_tag=GGE_2019 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11717 11969 . + . ID=id-GGE_2019-3;Dbxref=InterPro:IPR012784,TIGRFAM:TIGR02420;Note=dksa: rna polymerase-binding protein dksa~rna polymerase-binding%2C dksa;gbkey=misc_feature;gene=dksA;locus_tag=GGE_2019 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11834 11882 . + . ID=id-GGE_2019-4;Dbxref=InterPro:IPR000962;Note=ProfileScan:PS51128~zf_dksa_2~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature;gene=dksA;locus_tag=GGE_2019 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11705 11888 . - . ID=id-AFQR01000040.1:11705..11888;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11714 11963 . - . ID=id-AFQR01000040.1:11714..11963;Dbxref=InterPro:IPR020458;Note=PatternScan:PS01102~zf_dksa_1~zinc finger%2C dksa/trar c4-type conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11735 11954 . - . ID=id-AFQR01000040.1:11735..11954;Dbxref=InterPro:IPR000962,PFAM:PF01258;Note=zf-dska_trar~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 11762 11954 . - . ID=id-AFQR01000040.1:11762..11954;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12097 12106 . + . ID=id-AFQR01000040.1:12097..12106;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 12239 13681 . + . ID=gene-GGE_2020;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank CDS 12239 13681 . + 0 ID=cds-EGT79233.1;Parent=gene-GGE_2020;Dbxref=GeneID:1172043,InterPro:IPR002646,InterPro:IPR010206,PFAM:PF01743,TIGRFAM:TIGR01942,NCBI_GP:EGT79233.1;Name=EGT79233.1;Ontology_term=GO:0006396,GO:0006378,GO:0003723,GO:0016779,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||,nucleotidyltransferase activity|0016779||,polynucleotide adenylyltransferase activity|0004652||;go_process=RNA processing|0006396||,mRNA polyadenylation|0006378||;locus_tag=GGE_2020;product=Putative polyA polymerase;protein_id=EGT79233.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12251 12272 . + . ID=id-GGE_2020;Note=seg;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12365 13391 . + . ID=id-GGE_2020-2;Note=HMMPanther:PTHR13734:SF5~poly(a) polymerase~HMMPanther:PTHR13734~family not named;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12380 13541 . + . ID=id-GGE_2020-3;Dbxref=InterPro:IPR010206,TIGRFAM:TIGR01942;Note=pcnb: poly(a) polymerase~poly(a) polymerase%2C pcnb;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12380 13466 . + . ID=id-GGE_2020-4;Note=multi-dom%3B label: pcnB;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12380 12719 . + . ID=id-GGE_2020-5;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12389 12707 . + . ID=id-GGE_2020-6;Note=Gene3D:3.30.460.10;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12428 12668 . + . ID=id-GGE_2020-7;Note=specific~superfamily%3B label: NT_ClassII-CCAase;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12473 12635 . + . ID=id-GGE_2020-8;Dbxref=InterPro:IPR002646,PFAM:PF01743;Note=polya_pol~poly a polymerase%2C head domain;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12860 12878 . + . ID=id-GGE_2020-9;Note=superfamily:SSF81891~poly a polymerase c-terminal region-like;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12863 12941 . + . ID=id-GGE_2020-10;Note=Gene3D:1.10.3090.10;gbkey=misc_feature;gene=pcnB;locus_tag=GGE_2020 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 12290 13622 . - . ID=id-AFQR01000040.1:12290..13622;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 13690 14172 . + . ID=gene-GGE_2021;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank CDS 13690 14172 . + 0 ID=cds-EGT79234.1;Parent=gene-GGE_2021;Dbxref=GeneID:1170357,InterPro:IPR000550,PFAM:PF01288,TIGRFAM:TIGR01498,NCBI_GP:EGT79234.1;Name=EGT79234.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||;go_process=folic acid-containing compound biosynthetic process|0009396||;locus_tag=GGE_2021;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=EGT79234.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13690 14167 . + . ID=id-GGE_2021;Dbxref=InterPro:IPR000550;Note=superfamily:SSF55083~6-hydroxymethyl-7%2C8-dihydropterin pyrophosphokinase%2C hppk~7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C hppk;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13696 14101 . + . ID=id-GGE_2021-2;Note=HMMPanther:PTHR25996~family not named;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13699 14149 . + . ID=id-GGE_2021-3;Dbxref=InterPro:IPR000550;Note=Gene3D:3.30.70.560~7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C hppk;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13702 14080 . + . ID=id-GGE_2021-4;Dbxref=InterPro:IPR000550,TIGRFAM:TIGR01498;Note=folk: 2-amino-4-hydroxy-6-hydroxymethyldihyd~7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C hppk;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13702 14074 . + . ID=id-GGE_2021-5;Note=specific~superfamily%3B label: HPPK;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13705 14071 . + . ID=id-GGE_2021-6;Dbxref=InterPro:IPR000550,PFAM:PF01288;Note=hppk~7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C hppk;gbkey=misc_feature;gene=folK;locus_tag=GGE_2021 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 13726 13954 . - . ID=id-AFQR01000040.1:13726..13954;Dbxref=InterPro:IPR000550;Note=PatternScan:PS00794~hppk~7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C hppk;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14200 14209 . + . ID=id-AFQR01000040.1:14200..14209;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 14248 14724 . + . ID=gene-GGE_2022;Name=GGE_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank CDS 14248 14724 . + 0 ID=cds-EGT79235.1;Parent=gene-GGE_2022;Dbxref=GeneID:1176349,InterPro:IPR003442,PFAM:PF02367,TIGRFAM:TIGR00150,NCBI_GP:EGT79235.1;Name=EGT79235.1;Note=HI_0065;gbkey=CDS;locus_tag=GGE_2022;product=UPF0079 ATP-binding protein;protein_id=EGT79235.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14248 14716 . + . ID=id-GGE_2022;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14263 14704 . + . ID=id-GGE_2022-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14269 14668 . + . ID=id-GGE_2022-3;Dbxref=InterPro:IPR003442,TIGRFAM:TIGR00150;Note=hi0065_yjee: atpase%2C yjee family~uncharacterised protein family upf0079%2C atpase bacteria;gbkey=misc_feature;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14269 14662 . + . ID=id-GGE_2022-4;Note=superfamily%3B label: UPF0079 superfamily;gbkey=misc_feature;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14290 14626 . + . ID=id-GGE_2022-5;Dbxref=InterPro:IPR003442,PFAM:PF02367;Note=upf0079~uncharacterised protein family upf0079%2C atpase bacteria;gbkey=misc_feature;locus_tag=GGE_2022 GCA_000222085.2|AFQR01000040.1 Genbank gene 14857 16101 . + . ID=gene-GGE_2023;Name=GGE_2023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2023 GCA_000222085.2|AFQR01000040.1 Genbank CDS 14857 16101 . + 0 ID=cds-EGT79236.1;Parent=gene-GGE_2023;Dbxref=GeneID:260582016,InterPro:IPR002508,InterPro:IPR018392,PFAM:PF01476,PFAM:PF01520,NCBI_GP:EGT79236.1;Name=EGT79236.1;Note=ZP_05849811;Ontology_term=GO:0016998,GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||;go_process=cell wall macromolecule catabolic process|0016998||,peptidoglycan catabolic process|0009253||;locus_tag=GGE_2023;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=EGT79236.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14863 15478 . + . ID=id-GGE_2023;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;locus_tag=GGE_2023 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14863 15460 . + . ID=id-GGE_2023-2;Dbxref=InterPro:IPR002508,PFAM:PF01520;Note=specific~superfamily~amidase_3~cell wall hydrolase/autolysin%2C catalytic%3B label: MurNAc-LAA;gbkey=misc_feature;locus_tag=GGE_2023 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15796 15805 . + . ID=id-GGE_2023-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2023 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14986 15964 . - . ID=id-AFQR01000040.1:14986..15964;Dbxref=InterPro:IPR018392,PFAM:PF01476;Note=lysm~peptidoglycan-binding lysin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14986 15613 . - . ID=id-AFQR01000040.1:14986..15613;Dbxref=InterPro:IPR018392,PFAM:PF01476;Note=lysm~peptidoglycan-binding lysin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14989 15961 . - . ID=id-AFQR01000040.1:14989..15961;Note=superfamily%3B label: LysM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14992 15958 . - . ID=id-AFQR01000040.1:14992..15958;Note=Gene3D:3.10.350.10;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14992 15613 . - . ID=id-AFQR01000040.1:14992..15613;Note=HMMPanther:PTHR21666:SF20~soluble lytic murein transglycosylase and related regulatory proteins~HMMPanther:PTHR21666~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14992 15607 . - . ID=id-AFQR01000040.1:14992..15607;Note=specific~superfamily%3B label: LysM;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 14995 15607 . - . ID=id-AFQR01000040.1:14995..15607;Note=Gene3D:3.10.350.10;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15001 15604 . - . ID=id-AFQR01000040.1:15001..15604;Note=superfamily:SSF54106~lysm domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15004 15955 . - . ID=id-AFQR01000040.1:15004..15955;Note=superfamily:SSF54106~lysm domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15013 15796 . - . ID=id-AFQR01000040.1:15013..15796;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15091 15238 . - . ID=id-AFQR01000040.1:15091..15238;Dbxref=InterPro:IPR002508;Note=Gene3D:3.40.630.40~cell wall hydrolase/autolysin%2C catalytic;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 15148 15502 . - . ID=id-AFQR01000040.1:15148..15502;Note=multi-dom%3B label: PRK06347;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 16102 17991 . + . ID=gene-GGE_2024;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank CDS 16102 17991 . + 0 ID=cds-EGT79237.1;Parent=gene-GGE_2024;Dbxref=GeneID:166232090,InterPro:IPR002099,InterPro:IPR003594,InterPro:IPR013507,InterPro:IPR014721,InterPro:IPR014762,InterPro:IPR014763,InterPro:IPR014790,InterPro:IPR020568,InterPro:IPR020667,PFAM:PF01119,PFAM:PF02518,PFAM:PF08676,TIGRFAM:TIGR00585,NCBI_GP:EGT79237.1;Name=EGT79237.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutL;go_function=ATP binding|0005524||,mismatched DNA binding|0030983||;go_process=mismatch repair|0006298||;locus_tag=GGE_2024;product=DNA mismatch repair protein mutL;protein_id=EGT79237.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16102 17989 . + . ID=id-GGE_2024;Dbxref=InterPro:IPR020667;Note=HAMAP:MF_00149~dna_mis_repair~dna mismatch repair protein%2C mutl;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16102 17941 . + . ID=id-GGE_2024-2;Note=multi-dom%3B label: mutL;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16102 17101 . + . ID=id-GGE_2024-3;Dbxref=InterPro:IPR002099;Note=HMMPanther:PTHR10073:SF12~dna mismatch repair protein mutl~HMMPanther:PTHR10073~dna mismatch repair protein (mlh%2C pms%2C mutl)~dna mismatch repair protein;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16102 17032 . + . ID=id-GGE_2024-4;Dbxref=InterPro:IPR014763,TIGRFAM:TIGR00585;Note=mutl: dna mismatch repair protein mutl~dna mismatch repair protein;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16102 16738 . + . ID=id-GGE_2024-5;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16108 16726 . + . ID=id-GGE_2024-6;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16159 16408 . + . ID=id-GGE_2024-7;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16171 16336 . + . ID=id-GGE_2024-8;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature;gene=mutL;locus_tag=GGE_2024 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16123 16381 . - . ID=id-AFQR01000040.1:16123..16381;Dbxref=InterPro:IPR014762;Note=PatternScan:PS00058~dna_mismatch_repair_1~dna mismatch repair%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16138 17560 . - . ID=id-AFQR01000040.1:16138..17560;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16144 17512 . - . ID=id-AFQR01000040.1:16144..17512;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16144 16405 . - . ID=id-AFQR01000040.1:16144..16405;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16363 17602 . - . ID=id-AFQR01000040.1:16363..17602;Note=superfamily%3B label: MutL_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16444 16753 . - . ID=id-AFQR01000040.1:16444..16753;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16453 16741 . - . ID=id-AFQR01000040.1:16453..16741;Dbxref=InterPro:IPR013507,PFAM:PF01119;Note=dna_mis_repair~dna mismatch repair protein;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16462 16732 . - . ID=id-AFQR01000040.1:16462..16732;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16468 16726 . - . ID=id-AFQR01000040.1:16468..16726;Note=specific~superfamily%3B label: MutL_Trans_MutL;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16489 17476 . - . ID=id-AFQR01000040.1:16489..17476;Dbxref=InterPro:IPR014790,PFAM:PF08676;Note=mutl_c~mutl%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 16624 17470 . - . ID=id-AFQR01000040.1:16624..17470;Note=superfamily:SSF118116~dna mismatch repair protein mutl;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 17255 17264 . - . ID=id-AFQR01000040.1:17255..17264;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 17829 17838 . - . ID=id-AFQR01000040.1:17829..17838;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 17999 18934 . + . ID=gene-GGE_2025;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank CDS 17999 18934 . + 0 ID=cds-EGT79238.1;Parent=gene-GGE_2025;Dbxref=GeneID:81336954,InterPro:IPR002627,InterPro:IPR018022,PFAM:PF01715,TIGRFAM:TIGR00174,NCBI_GP:EGT79238.1;Name=EGT79238.1;Ontology_term=GO:0008033,GO:0005524;gbkey=CDS;gene=miaA;go_function=ATP binding|0005524||;go_process=tRNA processing|0008033||;locus_tag=GGE_2025;product=tRNA dimethylallyltransferase;protein_id=EGT79238.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 17999 18920 . + . ID=id-GGE_2025;Note=superfamily%3B label: IPPT superfamily;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 17999 18872 . + . ID=id-GGE_2025-2;Dbxref=InterPro:IPR002627;Note=HMMPanther:PTHR11088~family not named~trna isopentenyltransferase;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18005 18449 . + . ID=id-GGE_2025-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18014 18905 . + . ID=id-GGE_2025-4;Dbxref=InterPro:IPR018022;Note=HAMAP:MF_00185~ipp_trans~trna delta(2)-isopentenylpyrophosphate transferase;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18014 18869 . + . ID=id-GGE_2025-5;Dbxref=InterPro:IPR018022,TIGRFAM:TIGR00174;Note=miaa: trna delta(2)-isopentenylpyrophosphate~trna delta(2)-isopentenylpyrophosphate transferase;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18014 18449 . + . ID=id-GGE_2025-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18113 18761 . + . ID=id-GGE_2025-7;Dbxref=InterPro:IPR002627,PFAM:PF01715;Note=ippt~trna isopentenyltransferase;gbkey=misc_feature;gene=miaA;locus_tag=GGE_2025 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18035 18524 . - . ID=id-AFQR01000040.1:18035..18524;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 18940 21888 . + . ID=gene-GGE_2026;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank CDS 18940 21888 . + 0 ID=cds-EGT79239.1;Parent=gene-GGE_2026;Dbxref=GeneID:1169940,InterPro:IPR005190,InterPro:IPR013546,InterPro:IPR023057,PFAM:PF03710,PFAM:PF08335,NCBI_GP:EGT79239.1;Name=EGT79239.1;Ontology_term=GO:0008882,GO:0016779;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||,nucleotidyltransferase activity|0016779||;locus_tag=GGE_2026;product=Glutamate-ammonia-ligase adenylyltransferase;protein_id=EGT79239.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18940 21880 . + . ID=id-GGE_2026;Note=multi-dom%3B label: PRK11072;gbkey=misc_feature;gene=glnE;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18997 19810 . + . ID=id-GGE_2026-2;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature;gene=glnE;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19072 21757 . + . ID=id-GGE_2026-3;Dbxref=InterPro:IPR023057;Note=HAMAP:MF_00802~glne~glutamate-ammonia-ligase adenylyltransferase;gbkey=misc_feature;gene=glnE;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19081 19687 . + . ID=id-GGE_2026-4;Dbxref=InterPro:IPR005190,PFAM:PF03710;Note=glne~glutamate-ammonia ligase adenylyltransferase%2C repeated domain;gbkey=misc_feature;gene=glnE;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19255 19483 . + . ID=id-GGE_2026-5;Note=specific~superfamily%3B label: NT_GlnE_GlnD_like;gbkey=misc_feature;gene=glnE;locus_tag=GGE_2026 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 18942 18951 . - . ID=id-AFQR01000040.1:18942..18951;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19027 21460 . - . ID=id-AFQR01000040.1:19027..21460;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19198 21550 . - . ID=id-AFQR01000040.1:19198..21550;Dbxref=InterPro:IPR013546,PFAM:PF08335;Note=glnd_ur_utase~pii-uridylyltransferase/glutamine-synthetase adenylyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19249 21496 . - . ID=id-AFQR01000040.1:19249..21496;Note=superfamily%3B label: GlnD_UR_UTase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19330 21496 . - . ID=id-AFQR01000040.1:19330..21496;Note=superfamily:SSF81593~nucleotidyltransferase substrate binding subunit/domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19411 19897 . - . ID=id-AFQR01000040.1:19411..19897;Dbxref=InterPro:IPR013546,PFAM:PF08335;Note=superfamily~glnd_ur_utase~pii-uridylyltransferase/glutamine-synthetase adenylyltransferase%3B label: GlnD_UR_UTase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19444 19867 . - . ID=id-AFQR01000040.1:19444..19867;Note=superfamily:SSF81593~nucleotidyltransferase substrate binding subunit/domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19510 20911 . - . ID=id-AFQR01000040.1:19510..20911;Note=specific~superfamily%3B label: NT_GlnE_GlnD_like;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19699 20710 . - . ID=id-AFQR01000040.1:19699..20710;Dbxref=InterPro:IPR005190,PFAM:PF03710;Note=glne~glutamate-ammonia ligase adenylyltransferase%2C repeated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 19810 20629 . - . ID=id-AFQR01000040.1:19810..20629;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 20614 20623 . - . ID=id-AFQR01000040.1:20614..20623;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 21909 23615 . - . ID=gene-GGE_2027;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank CDS 21909 23615 . - 0 ID=cds-EGT79240.1;Parent=gene-GGE_2027;Dbxref=GeneID:1172896,InterPro:IPR003395,InterPro:IPR004604,PFAM:PF02463,TIGRFAM:TIGR00634,NCBI_GP:EGT79240.1;Name=EGT79240.1;Ontology_term=GO:0006310,GO:0006281,GO:0005694,GO:0005524;gbkey=CDS;gene=recN;go_component=chromosome|0005694||;go_function=ATP binding|0005524||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_2027;product=DNA repair protein recN;protein_id=EGT79240.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21942 23577 . - . ID=id-GGE_2027;Dbxref=InterPro:IPR004604,TIGRFAM:TIGR00634;Note=recn: dna repair protein recn~dna recombination/repair protein recn;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21942 23571 . - . ID=id-GGE_2027-2;Note=multi-dom%3B label: PRK10869;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21942 23436 . - . ID=id-GGE_2027-3;Dbxref=InterPro:IPR003395,PFAM:PF02463;Note=smc_n~recf/recn/smc;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21942 22569 . - . ID=id-GGE_2027-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21945 23568 . - . ID=id-GGE_2027-5;Note=HMMPanther:PTHR11059~family not named;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21945 23403 . - . ID=id-GGE_2027-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21945 22359 . - . ID=id-GGE_2027-7;Note=specific~superfamily%3B label: ABC_RecN;gbkey=misc_feature;gene=recN;locus_tag=GGE_2027 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21945 23046 . + . ID=id-AFQR01000040.1:21945..23046;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21975 22842 . + . ID=id-AFQR01000040.1:21975..22842;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21975 22590 . + . ID=id-AFQR01000040.1:21975..22590;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21975 22446 . + . ID=id-AFQR01000040.1:21975..22446;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 21996 22737 . + . ID=id-AFQR01000040.1:21996..22737;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 22206 23169 . + . ID=id-AFQR01000040.1:22206..23169;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 22299 23169 . + . ID=id-AFQR01000040.1:22299..23169;Note=specific~superfamily%3B label: ABC_RecN;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 22567 22576 . + . ID=id-AFQR01000040.1:22567..22576;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 23697 24623 . - . ID=gene-GGE_2028;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank CDS 23697 24623 . - 0 ID=cds-EGT79241.1;Parent=gene-GGE_2028;Dbxref=GeneID:91207547,InterPro:IPR002504,InterPro:IPR016064,InterPro:IPR017437,InterPro:IPR017438,PFAM:PF01513,NCBI_GP:EGT79241.1;Name=EGT79241.1;Ontology_term=GO:0008152,GO:0003951;gbkey=CDS;gene=ppnK;go_function=NAD+ kinase activity|0003951||;go_process=metabolic process|0008152||;locus_tag=GGE_2028;product=Putative inorganic polyphosphate/ATP-NAD kinase;protein_id=EGT79241.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23754 24555 . - . ID=id-GGE_2028;Dbxref=InterPro:IPR002504;Note=HMMPanther:PTHR20275~family not named~inorganic polyphosphate/atp-nad kinase%2C predicted;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23760 24549 . - . ID=id-GGE_2028-2;Dbxref=InterPro:IPR016064;Note=superfamily:SSF111331~nad kinase~atp-nad kinase%2C ppnk-type;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23763 24501 . - . ID=id-GGE_2028-3;Note=multi-dom%3B label: NAD_kinase;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23763 24498 . - . ID=id-GGE_2028-4;Dbxref=InterPro:IPR002504,PFAM:PF01513;Note=nad_kinase~inorganic polyphosphate/atp-nad kinase%2C predicted;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23778 24105 . - . ID=id-GGE_2028-5;Dbxref=InterPro:IPR017438;Note=Gene3D:3.40.50.10330~atp-nad kinase%2C ppnk-type%2C alpha/beta;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23802 24507 . - . ID=id-GGE_2028-6;Dbxref=InterPro:IPR002504;Note=HAMAP:MF_00361~nad_kinase~inorganic polyphosphate/atp-nad kinase%2C predicted;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 23808 24513 . - . ID=id-GGE_2028-7;Note=superfamily%3B label: DAGK_cat superfamily;gbkey=misc_feature;gene=ppnK;locus_tag=GGE_2028 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24045 24186 . + . ID=id-AFQR01000040.1:24045..24186;Dbxref=InterPro:IPR017437;Note=Gene3D:2.60.200.30~atp-nad kinase%2C ppnk-type%2C all-beta;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 24658 25284 . + . ID=gene-GGE_2029;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank CDS 24658 25284 . + 0 ID=cds-EGT79242.1;Parent=gene-GGE_2029;Dbxref=GeneID:8039789,InterPro:IPR000740,InterPro:IPR009012,InterPro:IPR013805,PFAM:PF01025,NCBI_GP:EGT79242.1;Name=EGT79242.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087,GO:0042803;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||,chaperone binding|0051087||,protein homodimerization activity|0042803||;go_process=protein folding|0006457||;locus_tag=GGE_2029;product=Protein grpE;protein_id=EGT79242.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24691 25252 . + . ID=id-GGE_2029;Note=multi-dom%3B label: GrpE;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24694 25249 . + . ID=id-GGE_2029-2;Dbxref=InterPro:IPR000740;Note=HAMAP:MF_01151~grpe~grpe nucleotide exchange factor;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24715 25225 . + . ID=id-GGE_2029-3;Dbxref=InterPro:IPR000740;Note=HMMPanther:PTHR21237~family not named~grpe nucleotide exchange factor;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24787 24799 . + . ID=id-GGE_2029-4;Note=coiled-coil;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24799 25141 . + . ID=id-GGE_2029-5;Dbxref=InterPro:IPR000740,PFAM:PF01025;Note=grpe~grpe nucleotide exchange factor;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24814 24955 . + . ID=id-GGE_2029-6;Dbxref=InterPro:IPR013805;Note=Gene3D:3.90.20.20~grpe nucleotide exchange factor%2C coiled-coil;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24862 25075 . + . ID=id-GGE_2029-7;Note=specific~superfamily%3B label: GrpE;gbkey=misc_feature;gene=grpE;locus_tag=GGE_2029 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24706 25138 . - . ID=id-AFQR01000040.1:24706..25138;Dbxref=InterPro:IPR000740;Note=FPrintScan:PR00773~grpeprotein~grpe nucleotide exchange factor;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24706 25102 . - . ID=id-AFQR01000040.1:24706..25102;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24706 24970 . - . ID=id-AFQR01000040.1:24706..24970;Dbxref=InterPro:IPR000740;Note=FPrintScan:PR00773~grpeprotein~grpe nucleotide exchange factor;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24709 24886 . - . ID=id-AFQR01000040.1:24709..24886;Dbxref=InterPro:IPR000740;Note=FPrintScan:PR00773~grpeprotein~grpe nucleotide exchange factor;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24718 25219 . - . ID=id-AFQR01000040.1:24718..25219;Dbxref=InterPro:IPR000740;Note=FPrintScan:PR00773~grpeprotein~grpe nucleotide exchange factor;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24790 25147 . - . ID=id-AFQR01000040.1:24790..25147;Dbxref=InterPro:IPR000740;Note=PatternScan:PS01071~grpe~grpe nucleotide exchange factor;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24826 25117 . - . ID=id-AFQR01000040.1:24826..25117;Dbxref=InterPro:IPR009012;Note=superfamily:SSF51064~head domain of nucleotide exchange factor grpe~grpe nucleotide exchange factor%2C head;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 24826 25114 . - . ID=id-AFQR01000040.1:24826..25114;Dbxref=InterPro:IPR009012;Note=Gene3D:2.30.22.10~grpe nucleotide exchange factor%2C head;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 25601 27724 . + . ID=gene-GGE_2030;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank CDS 25601 27724 . + 0 ID=cds-EGT79243.1;Parent=gene-GGE_2030;Dbxref=GeneID:1171762,InterPro:IPR001150,InterPro:IPR005144,InterPro:IPR012833,InterPro:IPR019777,PFAM:PF01228,PFAM:PF03477,TIGRFAM:TIGR02487,NCBI_GP:EGT79243.1;Name=EGT79243.1;Ontology_term=GO:0008152,GO:0055114,GO:0003824,GO:0016491,GO:0008998;gbkey=CDS;gene=nrdD;go_function=catalytic activity|0003824||,oxidoreductase activity|0016491||,ribonucleoside-triphosphate reductase activity|0008998||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_2030;product=Anaerobic ribonucleoside-triphosphate reductase;protein_id=EGT79243.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25601 27722 . + . ID=id-GGE_2030;Note=HMMPanther:PTHR21075~family not named;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25613 25877 . + . ID=id-GGE_2030-2;Dbxref=InterPro:IPR005144;Note=ProfileScan:PS51161~atp_cone~atp-cone;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25619 27707 . + . ID=id-GGE_2030-3;Note=multi-dom%3B label: PRK09263;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25619 25865 . + . ID=id-GGE_2030-4;Note=superfamily%3B label: ATP-cone superfamily;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25619 25862 . + . ID=id-GGE_2030-5;Dbxref=InterPro:IPR005144,PFAM:PF03477;Note=atp-cone~atp-cone;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25955 27368 . + . ID=id-GGE_2030-6;Dbxref=InterPro:IPR012833,TIGRFAM:TIGR02487;Note=nrdd: anaerobic ribonucleoside-triphosphate~ribonucleoside-triphosphate reductase%2C anaerobic;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25958 27305 . + . ID=id-GGE_2030-7;Note=specific~superfamily%3B label: RNR_III;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25973 27299 . + . ID=id-GGE_2030-8;Note=superfamily:SSF51998~pfl-like glycyl radical enzyme;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25979 27287 . + . ID=id-GGE_2030-9;Note=Gene3D:3.20.70.20;gbkey=misc_feature;gene=nrdD;locus_tag=GGE_2030 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25628 27632 . - . ID=id-AFQR01000040.1:25628..27632;Dbxref=InterPro:IPR019777;Note=PatternScan:PS00850~gly_radical_1~formate c-acetyltransferase glycine radical%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25643 26219 . - . ID=id-AFQR01000040.1:25643..26219;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25667 25874 . - . ID=id-AFQR01000040.1:25667..25874;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25913 27350 . - . ID=id-AFQR01000040.1:25913..27350;Dbxref=InterPro:IPR001150,PFAM:PF01228;Note=gly_radical~formate c-acetyltransferase glycine radical;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 25973 27353 . - . ID=id-AFQR01000040.1:25973..27353;Dbxref=InterPro:IPR001150;Note=ProfileScan:PS51149~gly_radical_2~formate c-acetyltransferase glycine radical;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 26885 26894 . - . ID=id-AFQR01000040.1:26885..26894;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27810 27819 . - . ID=id-AFQR01000040.1:27810..27819;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 27845 28702 . + . ID=gene-GGE_2031;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank CDS 27845 28702 . + 0 ID=cds-EGT79244.1;Parent=gene-GGE_2031;Dbxref=GeneID:1174640,InterPro:IPR003703,PFAM:PF02551,TIGRFAM:TIGR00189,NCBI_GP:EGT79244.1;Name=EGT79244.1;Ontology_term=GO:0006637,GO:0016291;gbkey=CDS;gene=tesB;go_function=acyl-CoA thioesterase activity|0016291||;go_process=acyl-CoA metabolic process|0006637||;locus_tag=GGE_2031;product=Acyl-CoA thioesterase 2;protein_id=EGT79244.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27845 28697 . + . ID=id-GGE_2031;Note=multi-dom%3B label: TesB;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27845 28694 . + . ID=id-GGE_2031-2;Dbxref=InterPro:IPR003703;Note=HMMPanther:PTHR11066:SF10~acyl-coa thioesterase ii~HMMPanther:PTHR11066~family not named~acyl-coa thioesterase;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27851 28187 . + . ID=id-GGE_2031-3;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27860 28181 . + . ID=id-GGE_2031-4;Note=Gene3D:3.10.129.10;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27881 28661 . + . ID=id-GGE_2031-5;Dbxref=InterPro:IPR003703,TIGRFAM:TIGR00189;Note=tesb: acyl-coa thioesterase ii~acyl-coa thioesterase;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 27908 28115 . + . ID=id-GGE_2031-6;Dbxref=InterPro:IPR003703,PFAM:PF02551;Note=specific~superfamily~acyl_coa_thio~acyl-coa thioesterase%3B label: hot_dog superfamily;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28193 28349 . + . ID=id-GGE_2031-7;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28229 28316 . + . ID=id-GGE_2031-8;Note=Gene3D:3.10.129.10;gbkey=misc_feature;gene=tesB;locus_tag=GGE_2031 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28160 28379 . - . ID=id-AFQR01000040.1:28160..28379;Note=specific~superfamily%3B label: hot_dog superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28247 28289 . - . ID=id-AFQR01000040.1:28247..28289;Dbxref=InterPro:IPR003703,PFAM:PF02551;Note=acyl_coa_thio~acyl-coa thioesterase;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 28716 29582 . + . ID=gene-GGE_2032;Name=GGE_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2032 GCA_000222085.2|AFQR01000040.1 Genbank CDS 28716 29582 . + 0 ID=cds-EGT79245.1;Parent=gene-GGE_2032;Dbxref=GeneID:1175102,InterPro:IPR007402,InterPro:IPR009078,InterPro:IPR011197,PFAM:PF04305,PIR:PIRSF012318,NCBI_GP:EGT79245.1;Name=EGT79245.1;Note=HI_0077;Ontology_term=GO:0055114,GO:0016491,GO:0046914;gbkey=CDS;go_function=oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_2032;product=putative ferritin/ribonucleotide reductase-like protein;protein_id=EGT79245.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28716 29565 . + . ID=id-GGE_2032;Dbxref=InterPro:IPR011197,PIR:PIRSF012318;Note=uncharacterised conserved protein%2C ucp012318 type~uncharacterised conserved protein ucp012318;gbkey=misc_feature;locus_tag=GGE_2032 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28764 29493 . + . ID=id-GGE_2032-2;Dbxref=InterPro:IPR007402,PFAM:PF04305;Note=duf455~protein of unknown function duf455;gbkey=misc_feature;locus_tag=GGE_2032 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28938 29190 . + . ID=id-GGE_2032-3;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;locus_tag=GGE_2032 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 28974 29139 . + . ID=id-GGE_2032-4;Note=specific~superfamily%3B label: Ferritin_like;gbkey=misc_feature;locus_tag=GGE_2032 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 29880 29895 . + . ID=id-AFQR01000040.1:29880..29895;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 29910 29967 . - . ID=id-AFQR01000040.1:29910..29967;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 30246 31625 . - . ID=gene-GGE_2033;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank CDS 30246 31625 . - 0 ID=cds-EGT79246.1;Parent=gene-GGE_2033;Dbxref=GeneID:81336945,InterPro:IPR009080,InterPro:IPR014729,InterPro:IPR015273,InterPro:IPR015803,PFAM:PF01406,PFAM:PF09190,TIGRFAM:TIGR00435,NCBI_GP:EGT79246.1;Name=EGT79246.1;Ontology_term=GO:0006423,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004817,GO:0000166;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,cysteine-tRNA ligase activity|0004817||,nucleotide binding|0000166||;go_process=cysteinyl-tRNA aminoacylation|0006423||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_2033;product=Cysteinyl-tRNA synthetase;protein_id=EGT79246.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30246 31620 . - . ID=id-GGE_2033;Note=multi-dom%3B label: cysS;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30246 31617 . - . ID=id-GGE_2033-2;Dbxref=InterPro:IPR015803;Note=HMMPanther:PTHR10890~cysteinyl-trna synthetase~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30246 31191 . - . ID=id-GGE_2033-3;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30252 31620 . - . ID=id-GGE_2033-4;Dbxref=InterPro:IPR015803,TIGRFAM:TIGR00435;Note=cyss: cysteinyl-trna synthetase~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30255 30588 . - . ID=id-GGE_2033-5;Note=specific~superfamily%3B label: CysRS_core;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30258 31149 . - . ID=id-GGE_2033-6;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30291 31140 . - . ID=id-GGE_2033-7;Dbxref=InterPro:IPR015803,PFAM:PF01406;Note=trna-synt_1e~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30633 30642 . - . ID=id-GGE_2033-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cysS;locus_tag=GGE_2033 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30276 30429 . + . ID=id-AFQR01000040.1:30276..30429;Dbxref=InterPro:IPR015803;Note=FPrintScan:PR00983~trnasynthcys~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30282 30321 . + . ID=id-AFQR01000040.1:30282..30321;Dbxref=InterPro:IPR015803;Note=FPrintScan:PR00983~trnasynthcys~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30288 31518 . + . ID=id-AFQR01000040.1:30288..31518;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30303 30819 . + . ID=id-AFQR01000040.1:30303..30819;Dbxref=InterPro:IPR015803;Note=FPrintScan:PR00983~trnasynthcys~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30312 30912 . + . ID=id-AFQR01000040.1:30312..30912;Dbxref=InterPro:IPR015803;Note=FPrintScan:PR00983~trnasynthcys~cysteinyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30312 30717 . + . ID=id-AFQR01000040.1:30312..30717;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30429 31272 . + . ID=id-AFQR01000040.1:30429..31272;Dbxref=InterPro:IPR015273,PFAM:PF09190;Note=dalr_2~cysteinyl-trna synthetase%2C class ia%2C dalr;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30549 30861 . + . ID=id-AFQR01000040.1:30549..30861;Note=specific~superfamily%3B label: CysRS_core;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30678 31194 . + . ID=id-AFQR01000040.1:30678..31194;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 30705 31164 . + . ID=id-AFQR01000040.1:30705..31164;Note=specific~superfamily%3B label: Anticodon_Ia_Cys;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31655 31664 . - . ID=id-AFQR01000040.1:31655..31664;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 31728 32237 . + . ID=gene-GGE_2034;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank CDS 31728 32237 . + 0 ID=cds-EGT79247.1;Parent=gene-GGE_2034;Dbxref=GeneID:1169177,InterPro:IPR002130,InterPro:IPR015891,InterPro:IPR020892,PFAM:PF00160,NCBI_GP:EGT79247.1;Name=EGT79247.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=ppiB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||;go_process=protein folding|0006457||;locus_tag=GGE_2034;product=Peptidyl-prolyl cis-trans isomerase B;protein_id=EGT79247.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31728 32232 . + . ID=id-GGE_2034;Dbxref=InterPro:IPR002130,InterPro:IPR015891;Note=ProfileScan:PS50072~csa_ppiase_2~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type~HMMPanther:PTHR11071:SF29~peptidyl-prolyl cis-trans isomerase b%2C ppib~HMMPanther:PTHR11071~family not named~superfamily:SSF50891~cyclophilin-like~cyclophilin-like;gbkey=misc_feature;gene=ppiB;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31734 32229 . + . ID=id-GGE_2034-2;Dbxref=InterPro:IPR002130;Note=Gene3D:2.40.100.10~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;gbkey=misc_feature;gene=ppiB;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31734 32226 . + . ID=id-GGE_2034-3;Dbxref=InterPro:IPR002130,PFAM:PF00160;Note=pro_isomerase~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;gbkey=misc_feature;gene=ppiB;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31737 32220 . + . ID=id-GGE_2034-4;Note=specific~superfamily%3B label: cyclophilin superfamily;gbkey=misc_feature;gene=ppiB;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31773 31776 . + . ID=id-GGE_2034-5;Dbxref=InterPro:IPR002130;Note=FPrintScan:PR00153~csappismrase~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;gbkey=misc_feature;gene=ppiB;locus_tag=GGE_2034 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31767 31851 . - . ID=id-AFQR01000040.1:31767..31851;Dbxref=InterPro:IPR002130;Note=FPrintScan:PR00153~csappismrase~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31776 32100 . - . ID=id-AFQR01000040.1:31776..32100;Dbxref=InterPro:IPR002130;Note=FPrintScan:PR00153~csappismrase~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 31782 31836 . - . ID=id-AFQR01000040.1:31782..31836;Dbxref=InterPro:IPR020892;Note=PatternScan:PS00170~csa_ppiase_1~peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 32286 33080 . + . ID=gene-GGE_2035;Name=GGE_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank CDS 32286 33080 . + 0 ID=cds-EGT79248.1;Parent=gene-GGE_2035;Dbxref=GeneID:1176482,InterPro:IPR001130,InterPro:IPR012278,InterPro:IPR015992,InterPro:IPR018228,PFAM:PF01026,PIR:PIRSF005902,NCBI_GP:EGT79248.1;Name=EGT79248.1;Note=HI_0081;Ontology_term=GO:0016888;gbkey=CDS;go_function=endodeoxyribonuclease activity producing 5'-phosphomonoesters|0016888||;locus_tag=GGE_2035;product=putative metallo-dependent hydrolase;protein_id=EGT79248.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32286 33078 . + . ID=id-GGE_2035;Note=Gene3D:3.20.20.140;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32286 33075 . + . ID=id-GGE_2035-2;Note=multi-dom%3B label: PRK11449;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32295 33072 . + . ID=id-GGE_2035-3;Dbxref=InterPro:IPR012278,InterPro:IPR015992,PIR:PIRSF005902;Note=mg-dependent dnase%2C tatd type~deoxyribonuclease%2C tatd mg-dependent~HMMPanther:PTHR10060~tatd family deoxyribonuclease~deoxyribonuclease%2C tatd;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32301 33066 . + . ID=id-GGE_2035-4;Note=specific~superfamily~superfamily:SSF51556~metallo-dependent hydrolase%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32301 32313 . + . ID=id-GGE_2035-5;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01137~tatd_1~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32304 33063 . + . ID=id-GGE_2035-6;Dbxref=InterPro:IPR001130,PFAM:PF01026;Note=tatd_dnase~deoxyribonuclease%2C tatd-related;gbkey=misc_feature;locus_tag=GGE_2035 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32319 32694 . - . ID=id-AFQR01000040.1:32319..32694;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01090~tatd_2~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32337 32886 . - . ID=id-AFQR01000040.1:32337..32886;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01091~tatd_3~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 32447 32456 . - . ID=id-AFQR01000040.1:32447..32456;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 33192 34319 . + . ID=gene-GGE_2036;Name=GGE_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank CDS 33192 34319 . + 0 ID=cds-EGT79249.1;Parent=gene-GGE_2036;Dbxref=GeneID:241889548,InterPro:IPR006090,InterPro:IPR006091,InterPro:IPR006092,InterPro:IPR009075,InterPro:IPR009100,InterPro:IPR013786,PFAM:PF00441,PFAM:PF02771,NCBI_GP:EGT79249.1;Name=EGT79249.1;Note=ZP_04776847;Ontology_term=GO:0008152,GO:0055114,GO:0003995,GO:0050660,GO:0016627;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity acting on the CH-CH group of donors|0016627||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_2036;product=putative acyl-coa dehydrogenase;protein_id=EGT79249.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33192 34248 . + . ID=id-GGE_2036;Note=HMMPanther:PTHR10909~family not named;gbkey=misc_feature;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33201 34305 . + . ID=id-GGE_2036-2;Note=multi-dom%3B label: CaiA;gbkey=misc_feature;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33201 33840 . + . ID=id-GGE_2036-3;Dbxref=InterPro:IPR009100;Note=superfamily:SSF56645~acyl-coa dehydrogenase nm domain-like~acyl-coa dehydrogenase/oxidase;gbkey=misc_feature;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33201 33507 . + . ID=id-GGE_2036-4;Dbxref=InterPro:IPR006092,InterPro:IPR013786,PFAM:PF02771;Note=acyl-coa_dh_n~acyl-coa dehydrogenase~Gene3D:1.10.540.10~acyl-coa dehydrogenase/oxidase;gbkey=misc_feature;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33216 34221 . + . ID=id-GGE_2036-5;Note=specific~superfamily%3B label: ACAD;gbkey=misc_feature;locus_tag=GGE_2036 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33291 34041 . - . ID=id-AFQR01000040.1:33291..34041;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33480 33531 . - . ID=id-AFQR01000040.1:33480..33531;Dbxref=InterPro:IPR006091;Note=Gene3D:2.40.110.10~acyl-coa oxidase/dehydrogenase%2C central domain;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33549 33900 . - . ID=id-AFQR01000040.1:33549..33900;Dbxref=InterPro:IPR006090,PFAM:PF00441;Note=acyl-coa_dh_1~acyl-coa oxidase/dehydrogenase%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33654 33846 . - . ID=id-AFQR01000040.1:33654..33846;Dbxref=InterPro:IPR009075;Note=superfamily:SSF47203~acyl-coa dehydrogenase c-terminal domain-like~acyl-coa dehydrogenase/oxidase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 33684 33819 . - . ID=id-AFQR01000040.1:33684..33819;Dbxref=InterPro:IPR009075;Note=Gene3D:1.20.140.10~acyl-coa dehydrogenase/oxidase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34317 34326 . + . ID=id-AFQR01000040.1:34317..34326;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 34333 35139 . + . ID=gene-GGE_2037;Name=GGE_2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank CDS 34333 35139 . + 0 ID=cds-EGT79250.1;Parent=gene-GGE_2037;Dbxref=GeneID:241889545,InterPro:IPR015168,PFAM:PF09084,NCBI_GP:EGT79250.1;Name=EGT79250.1;Note=ZP_04776844;gbkey=CDS;locus_tag=GGE_2037;product=putative phosphonate ABC transporter substrate-binding protein;protein_id=EGT79250.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34339 35008 . + . ID=id-GGE_2037;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34354 34387 . + . ID=id-GGE_2037-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34372 34945 . + . ID=id-GGE_2037-3;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34399 34678 . + . ID=id-GGE_2037-4;Dbxref=InterPro:IPR015168,PFAM:PF09084;Note=nmt1~nmt1/thi5-like;gbkey=misc_feature;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34597 34678 . + . ID=id-GGE_2037-5;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_2037 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 34381 34765 . - . ID=id-AFQR01000040.1:34381..34765;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 35193 36362 . + . ID=gene-GGE_2038;Name=GGE_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank CDS 35193 36362 . + 0 ID=cds-EGT79251.1;Parent=gene-GGE_2038;Dbxref=GeneID:241889537,InterPro:IPR002629,PFAM:PF01717,NCBI_GP:EGT79251.1;Name=EGT79251.1;Note=ZP_04776836;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||;go_process=methionine biosynthetic process|0009086||;locus_tag=GGE_2038;product=5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase;protein_id=EGT79251.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35193 36351 . + . ID=id-GGE_2038;Note=multi-dom%3B label: PRK01207;gbkey=misc_feature;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35199 36354 . + . ID=id-GGE_2038-2;Note=Gene3D:3.20.20.210;gbkey=misc_feature;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35205 36351 . + . ID=id-GGE_2038-3;Note=superfamily:SSF51726~urod/mete-like;gbkey=misc_feature;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35205 36261 . + . ID=id-GGE_2038-4;Dbxref=InterPro:IPR002629,PFAM:PF01717;Note=meth_synt_2~methionine synthase%2C vitamin-b12 independent;gbkey=misc_feature;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35211 36327 . + . ID=id-GGE_2038-5;Note=specific~superfamily%3B label: CIMS_C_terminal_like;gbkey=misc_feature;locus_tag=GGE_2038 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 35259 35289 . - . ID=id-AFQR01000040.1:35259..35289;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 36355 36819 . + . ID=gene-GGE_2039;Name=GGE_2039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2039 GCA_000222085.2|AFQR01000040.1 Genbank CDS 36355 36819 . + 0 ID=cds-EGT79252.1;Parent=gene-GGE_2039;Dbxref=GeneID:160947215,NCBI_GP:EGT79252.1;Name=EGT79252.1;Note=ZP_02094382~PEPMIC_01148;gbkey=CDS;locus_tag=GGE_2039;product=Hypothetical protein;protein_id=EGT79252.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36493 36502 . + . ID=id-GGE_2039;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2039 GCA_000222085.2|AFQR01000040.1 Genbank gene 36920 37243 . - . ID=gene-GGE_2040;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank CDS 36920 37243 . - 0 ID=cds-EGT79253.1;Parent=gene-GGE_2040;Dbxref=GeneID:1174685,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00085,TIGRFAM:TIGR01068,NCBI_GP:EGT79253.1;Name=EGT79253.1;Ontology_term=GO:0045454,GO:0006662,GO:0009055,GO:0015035;gbkey=CDS;gene=trxA;go_function=electron carrier activity|0009055||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,glycerol ether metabolic process|0006662||;locus_tag=GGE_2040;product=Thioredoxin;protein_id=EGT79253.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36920 37241 . - . ID=id-GGE_2040;Dbxref=InterPro:IPR012336,InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like~superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36932 37232 . - . ID=id-GGE_2040-2;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36932 37229 . - . ID=id-GGE_2040-3;Dbxref=InterPro:IPR013766,PFAM:PF00085;Note=thioredoxin~thioredoxin domain;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36935 37229 . - . ID=id-GGE_2040-4;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36941 37223 . - . ID=id-GGE_2040-5;Dbxref=InterPro:IPR005746,TIGRFAM:TIGR01068;Note=thioredoxin: thioredoxin~thioredoxin;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36950 37205 . - . ID=id-GGE_2040-6;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;gene=trxA;locus_tag=GGE_2040 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36947 36989 . + . ID=id-AFQR01000040.1:36947..36989;Dbxref=InterPro:IPR005746;Note=FPrintScan:PR00421~thioredoxin~thioredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36950 37013 . + . ID=id-AFQR01000040.1:36950..37013;Dbxref=InterPro:IPR005746;Note=FPrintScan:PR00421~thioredoxin~thioredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36956 37133 . + . ID=id-AFQR01000040.1:36956..37133;Dbxref=InterPro:IPR005746;Note=FPrintScan:PR00421~thioredoxin~thioredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 36977 36992 . + . ID=id-AFQR01000040.1:36977..36992;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 37363 38358 . - . ID=gene-GGE_2041;Name=ddh;gbkey=Gene;gene=ddh;gene_biotype=protein_coding;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank CDS 37363 38358 . - 0 ID=cds-EGT79254.1;Parent=gene-GGE_2041;Dbxref=GeneID:1169256,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,PFAM:PF00389,PFAM:PF02826,NCBI_GP:EGT79254.1;Name=EGT79254.1;Ontology_term=GO:0008152,GO:0051287,GO:0005488,GO:0003824,GO:0048037,GO:0016616;gbkey=CDS;gene=ddh;go_function=NAD or NADH binding|0051287||,binding|0005488||,catalytic activity|0003824||,cofactor binding|0048037||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||;go_process=metabolic process|0008152||;locus_tag=GGE_2041;product=2-hydroxyacid dehydrogenase;protein_id=EGT79254.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37363 38356 . - . ID=id-GGE_2041;Note=multi-dom%3B label: LdhA;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37363 38347 . - . ID=id-GGE_2041-2;Note=HMMPanther:PTHR10996:SF17~2-hydroxyacid dehydrogenase~HMMPanther:PTHR10996~2-hydroxyacid dehydrogenase-related;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37363 37768 . - . ID=id-GGE_2041-3;Note=superfamily:SSF52283~formate/glycerate dehydrogenase catalytic domain-like;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37363 37711 . - . ID=id-GGE_2041-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37372 38341 . - . ID=id-GGE_2041-5;Dbxref=InterPro:IPR006139,PFAM:PF00389;Note=2-hacid_dh~d-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37669 37954 . - . ID=id-GGE_2041-6;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37693 37927 . - . ID=id-GGE_2041-7;Dbxref=InterPro:IPR006140,PFAM:PF02826;Note=superfamily~2-hacid_dh_c~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37714 37903 . - . ID=id-GGE_2041-8;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=ddh;locus_tag=GGE_2041 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37411 37795 . + . ID=id-AFQR01000040.1:37411..37795;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37414 38032 . + . ID=id-AFQR01000040.1:37414..38032;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00671~d_2_hydroxyacid_dh_3~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37432 37945 . + . ID=id-AFQR01000040.1:37432..37945;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00670~d_2_hydroxyacid_dh_2~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 37447 37804 . + . ID=id-AFQR01000040.1:37447..37804;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00065~d_2_hydroxyacid_dh_1~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 38371 39480 . - . ID=gene-GGE_2042;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank CDS 38371 39480 . - 0 ID=cds-EGT79255.1;Parent=gene-GGE_2042;Dbxref=GeneID:1170928,InterPro:IPR000277,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF01053,PIR:PIRSF001434,NCBI_GP:EGT79255.1;Name=EGT79255.1;Ontology_term=GO:0006520,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_2042;product=Cystathionine gamma-synthase;protein_id=EGT79255.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38380 39472 . - . ID=id-GGE_2042;Dbxref=InterPro:IPR000277;Note=multi-dom~HMMPanther:PTHR11808:SF26~subfamily not named~HMMPanther:PTHR11808~family not named~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme%3B label: PRK08247;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38386 39460 . - . ID=id-GGE_2042-2;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38392 39100 . - . ID=id-GGE_2042-3;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38395 39457 . - . ID=id-GGE_2042-4;Dbxref=InterPro:IPR000277,PIR:PIRSF001434;Note=cystathionine gamma-synthase~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38395 39445 . - . ID=id-GGE_2042-5;Dbxref=InterPro:IPR000277,PFAM:PF01053;Note=cys_met_meta_pp~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38440 39403 . - . ID=id-GGE_2042-6;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=metB;locus_tag=GGE_2042 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38416 38947 . + . ID=id-AFQR01000040.1:38416..38947;Dbxref=InterPro:IPR000277;Note=PatternScan:PS00868~cys_met_metab_pp~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 38728 39121 . + . ID=id-AFQR01000040.1:38728..39121;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 39508 39517 . - . ID=id-AFQR01000040.1:39508..39517;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 40669 42270 . - . ID=gene-GGE_2043;Name=GGE_2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2043 GCA_000222085.2|AFQR01000040.1 Genbank CDS 40669 42270 . - 0 ID=cds-EGT79256.1;Parent=gene-GGE_2043;Dbxref=GeneID:9628641,NCBI_GP:EGT79256.1;Name=EGT79256.1;Note=NP_043506;gbkey=CDS;locus_tag=GGE_2043;product=Hypothetical protein;protein_id=EGT79256.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 42130 42139 . - . ID=id-GGE_2043;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2043 GCA_000222085.2|AFQR01000040.1 Genbank gene 42257 42886 . - . ID=gene-GGE_2044;Name=GGE_2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2044 GCA_000222085.2|AFQR01000040.1 Genbank CDS 42257 42886 . - 0 ID=cds-EGT79257.1;Parent=gene-GGE_2044;Dbxref=GeneID:17981850,NCBI_GP:EGT79257.1;Name=EGT79257.1;Note=NP_536841;gbkey=CDS;locus_tag=GGE_2044;product=orf34;protein_id=EGT79257.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 42293 42659 . + . ID=id-AFQR01000040.1:42293..42659;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 42873 43640 . - . ID=gene-GGE_2045;Name=GGE_2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2045 GCA_000222085.2|AFQR01000040.1 Genbank CDS 42873 43640 . - 0 ID=cds-EGT79258.1;Parent=gene-GGE_2045;Dbxref=GeneID:9628639,NCBI_GP:EGT79258.1;Name=EGT79258.1;Note=NP_043504;gbkey=CDS;locus_tag=GGE_2045;product=Hypothetical protein;protein_id=EGT79258.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 42939 43413 . + . ID=id-AFQR01000040.1:42939..43413;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank gene 44193 44534 . - . ID=gene-GGE_2046;Name=GGE_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2046 GCA_000222085.2|AFQR01000040.1 Genbank CDS 44193 44534 . - 0 ID=cds-EGT79259.1;Parent=gene-GGE_2046;Dbxref=GeneID:225076673,NCBI_GP:EGT79259.1;Name=EGT79259.1;Note=ZP_03719872~NEIFLAOT_01724;gbkey=CDS;locus_tag=GGE_2046;product=Hypothetical protein;protein_id=EGT79259.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 44221 44230 . - . ID=id-GGE_2046;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_2046 GCA_000222085.2|AFQR01000040.1 Genbank gene 44527 44805 . - . ID=gene-GGE_2047;Name=GGE_2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2047 GCA_000222085.2|AFQR01000040.1 Genbank CDS 44527 44805 . - 0 ID=cds-EGT79260.1;Parent=gene-GGE_2047;Dbxref=GeneID:301155064,NCBI_GP:EGT79260.1;Name=EGT79260.1;Note=CBW14527;gbkey=CDS;locus_tag=GGE_2047;product=Hypothetical protein;protein_id=EGT79260.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank gene 44784 45407 . - . ID=gene-GGE_2048;Name=GGE_2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2048 GCA_000222085.2|AFQR01000040.1 Genbank CDS 44784 45407 . - 0 ID=cds-EGT79261.1;Parent=gene-GGE_2048;Dbxref=GeneID:319896501,InterPro:IPR020088,NCBI_GP:EGT79261.1;Name=EGT79261.1;Note=YP_004134694;gbkey=CDS;locus_tag=GGE_2048;product=Hypothetical protein;protein_id=EGT79261.1;transl_table=11 GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 44850 45042 . + . ID=id-AFQR01000040.1:44850..45042;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 44850 45033 . + . ID=id-AFQR01000040.1:44850..45033;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 44976 45201 . + . ID=id-AFQR01000040.1:44976..45201;Dbxref=InterPro:IPR020088;Note=BlastProDom:PD055258~y1402_haein_p44177~uncharacterised protein family hi1402;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 44976 45192 . + . ID=id-AFQR01000040.1:44976..45192;Dbxref=InterPro:IPR020088;Note=BlastProDom:PD055258~y1402_haein_p44177~uncharacterised protein family hi1402;gbkey=misc_feature GCA_000222085.2|AFQR01000040.1 Genbank sequence_feature 45154 45163 . + . ID=id-AFQR01000040.1:45154..45163;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000039.1 1 14638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000039.1 Genbank region 1 14638 . + . ID=AFQR01000039.1:1..14638;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000039.1 Genbank gene 1121 3223 . - . ID=gene-GGE_1997;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank CDS 1121 3223 . - 0 ID=cds-EGT79289.1;Parent=gene-GGE_1997;Dbxref=GeneID:81336387,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004540,InterPro:IPR005225,InterPro:IPR005517,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR014721,InterPro:IPR020568,PFAM:PF00009,PFAM:PF00679,PFAM:PF03144,PFAM:PF03764,TIGRFAM:TIGR00231,TIGRFAM:TIGR00484,NCBI_GP:EGT79289.1;Name=EGT79289.1;Ontology_term=GO:0006414,GO:0005622,GO:0005525,GO:0003924,GO:0003746;gbkey=CDS;gene=fusA;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,GTPase activity|0003924||,translation elongation factor activity|0003746||;go_process=translational elongation|0006414||;locus_tag=GGE_1997;product=Elongation factor G;protein_id=EGT79289.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1121 3221 . - . ID=id-GGE_1997;Dbxref=InterPro:IPR004540,TIGRFAM:TIGR00484;Note=multi-dom~ef-g: translation elongation factor g~translation elongation factor efg/ef2%3B label: PRK00007;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1121 3215 . - . ID=id-GGE_1997-2;Note=HMMPanther:PTHR23115:SF84~subfamily not named~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1136 1973 . - . ID=id-GGE_1997-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1139 1979 . - . ID=id-GGE_1997-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1145 1664 . - . ID=id-GGE_1997-5;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1148 1958 . - . ID=id-GGE_1997-6;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1157 1955 . - . ID=id-GGE_1997-7;Note=specific~superfamily%3B label: EF-G;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1157 1163 . - . ID=id-GGE_1997-8;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=fusA;locus_tag=GGE_1997 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1148 1793 . + . ID=id-AFQR01000039.1:1148..1793;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1148 1295 . + . ID=id-AFQR01000039.1:1148..1295;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1151 1532 . + . ID=id-AFQR01000039.1:1151..1532;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1154 1376 . + . ID=id-AFQR01000039.1:1154..1376;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1157 1424 . + . ID=id-AFQR01000039.1:1157..1424;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1169 1274 . + . ID=id-AFQR01000039.1:1169..1274;Dbxref=InterPro:IPR000795;Note=PatternScan:PS00301~efactor_gtp~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1184 2873 . + . ID=id-AFQR01000039.1:1184..2873;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1325 2108 . + . ID=id-AFQR01000039.1:1325..2108;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1346 2357 . + . ID=id-AFQR01000039.1:1346..2357;Note=Gene3D:3.30.70.870;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1355 2951 . + . ID=id-AFQR01000039.1:1355..2951;Note=specific~superfamily%3B label: EFG_mtEFG_C;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1355 2348 . + . ID=id-AFQR01000039.1:1355..2348;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1367 2066 . + . ID=id-AFQR01000039.1:1367..2066;Note=specific~superfamily%3B label: EFG_mtEFG_II;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1376 2942 . + . ID=id-AFQR01000039.1:1376..2942;Dbxref=InterPro:IPR000640,PFAM:PF00679;Note=efg_c~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1385 2951 . + . ID=id-AFQR01000039.1:1385..2951;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1409 2933 . + . ID=id-AFQR01000039.1:1409..2933;Dbxref=InterPro:IPR000640;Note=Gene3D:3.30.70.240~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1409 2585 . + . ID=id-AFQR01000039.1:1409..2585;Note=specific~superfamily%3B label: EFG_like_IV superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1427 2051 . + . ID=id-AFQR01000039.1:1427..2051;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1466 2588 . + . ID=id-AFQR01000039.1:1466..2588;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1487 2573 . + . ID=id-AFQR01000039.1:1487..2573;Dbxref=InterPro:IPR005517,PFAM:PF03764;Note=efg_iv~translation elongation factor efg/ef2%2C domain iv;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1490 2573 . + . ID=id-AFQR01000039.1:1490..2573;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 1538 1934 . + . ID=id-AFQR01000039.1:1538..1934;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 3307 3777 . - . ID=gene-GGE_1998;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank CDS 3307 3777 . - 0 ID=cds-EGT79290.1;Parent=gene-GGE_1998;Dbxref=GeneID:1173274,InterPro:IPR000235,InterPro:IPR005717,InterPro:IPR020606,PFAM:PF00177,TIGRFAM:TIGR01029,NCBI_GP:EGT79290.1;Name=EGT79290.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsG;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1998;product=30S ribosomal protein S7;protein_id=EGT79290.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3307 3775 . - . ID=id-GGE_1998;Dbxref=InterPro:IPR000235;Note=superfamily~HMMPanther:PTHR11205:SF13~subfamily not named~HMMPanther:PTHR11205~family not named~ribosomal protein s7%3B label: Ribosomal_S7 superfamily;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3307 3754 . - . ID=id-GGE_1998-2;Dbxref=InterPro:IPR000235,PFAM:PF00177;Note=ribosomal_s7~ribosomal protein s7;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3316 3769 . - . ID=id-GGE_1998-3;Dbxref=InterPro:IPR005717,TIGRFAM:TIGR01029;Note=rpsg_bact: ribosomal protein s7~ribosomal protein s7%2C bacterial-type;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3331 3754 . - . ID=id-GGE_1998-4;Dbxref=InterPro:IPR000235;Note=Gene3D:1.10.455.10~ribosomal protein s7;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3343 3742 . - . ID=id-GGE_1998-5;Dbxref=InterPro:IPR000235;Note=superfamily:SSF47973~ribosomal protein s7~ribosomal protein s7;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3367 3388 . - . ID=id-GGE_1998-6;Dbxref=InterPro:IPR020606;Note=PatternScan:PS00052~ribosomal_s7~ribosomal protein s7%2C conserved site;gbkey=misc_feature;gene=rpsG;locus_tag=GGE_1998 GCA_000222085.2|AFQR01000039.1 Genbank gene 3935 4309 . - . ID=gene-GGE_1999;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank CDS 3935 4309 . - 0 ID=cds-EGT79291.1;Parent=gene-GGE_1999;Dbxref=InterPro:IPR005679,InterPro:IPR006032,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00164,PIR:PIRSF002133,TIGRFAM:TIGR00981,NCBI_GP:EGT79291.1;Name=EGT79291.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003735;gbkey=CDS;gene=rpsL;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1999;product=30S ribosomal protein S12;protein_id=EGT79291.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3935 4307 . - . ID=id-GGE_1999;Dbxref=InterPro:IPR005679,InterPro:IPR006032,PIR:PIRSF002133,TIGRFAM:TIGR00981;Note=ribosomal protein%2C s12p/s12a/s23e/organellar s12 types~ribosomal protein s12/s23~rpsl_bact: ribosomal protein s12~ribosomal protein s12%2C bacteria~HMMPanther:PTHR11652~family not named~ribosomal protein s12/s23;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3935 4304 . - . ID=id-GGE_1999-2;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3941 4301 . - . ID=id-GGE_1999-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3944 4298 . - . ID=id-GGE_1999-4;Dbxref=InterPro:IPR006032,PFAM:PF00164;Note=ribosomal_s12~ribosomal protein s12/s23;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3944 4259 . - . ID=id-GGE_1999-5;Note=specific~superfamily%3B label: Ribosomal_S12;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3959 3968 . - . ID=id-GGE_1999-6;Note=seg;gbkey=misc_feature;gene=rpsL;locus_tag=GGE_1999 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3959 4064 . + . ID=id-AFQR01000039.1:3959..4064;Dbxref=InterPro:IPR006032;Note=PatternScan:PS00055~ribosomal_s12~ribosomal protein s12/s23;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3974 4265 . + . ID=id-AFQR01000039.1:3974..4265;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3983 4061 . + . ID=id-AFQR01000039.1:3983..4061;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3983 4016 . + . ID=id-AFQR01000039.1:3983..4016;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3986 4217 . + . ID=id-AFQR01000039.1:3986..4217;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3989 4166 . + . ID=id-AFQR01000039.1:3989..4166;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 3995 4109 . + . ID=id-AFQR01000039.1:3995..4109;Dbxref=InterPro:IPR005679;Note=FPrintScan:PR01034~ribosomals12~ribosomal protein s12%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4485 4494 . - . ID=id-AFQR01000039.1:4485..4494;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 4572 5963 . + . ID=gene-GGE_2000;Name=GGE_2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank CDS 4572 5963 . + 0 ID=cds-EGT79292.1;Parent=gene-GGE_2000;Dbxref=GeneID:301155105,InterPro:IPR001807,InterPro:IPR014743,PFAM:PF00654,NCBI_GP:EGT79292.1;Name=EGT79292.1;Note=CBW14568;Ontology_term=GO:0006821,GO:0055085,GO:0016020,GO:0005216,GO:0005247;gbkey=CDS;go_component=membrane|0016020||;go_function=ion channel activity|0005216||,voltage-gated chloride channel activity|0005247||;go_process=chloride transport|0006821||,transmembrane transport|0055085||;locus_tag=GGE_2000;product=Hypothetical protein;protein_id=EGT79292.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4596 5907 . + . ID=id-GGE_2000;Dbxref=InterPro:IPR014743;Note=superfamily:SSF81340~clc chloride channel~chloride channel%2C core;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4629 5838 . + . ID=id-GGE_2000-2;Dbxref=InterPro:IPR014743;Note=Gene3D:1.10.3080.10~chloride channel%2C core;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4656 5859 . + . ID=id-GGE_2000-3;Dbxref=InterPro:IPR001807;Note=HMMPanther:PTHR11689:SF14~voltage-gated clc-type chloride channel eric~HMMPanther:PTHR11689~family not named~chloride channel%2C voltage gated;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4704 5754 . + . ID=id-GGE_2000-4;Note=specific~superfamily%3B label: EriC_like;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4803 5568 . + . ID=id-GGE_2000-5;Note=multi-dom%3B label: Voltage_CLC;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4806 5625 . + . ID=id-GGE_2000-6;Dbxref=InterPro:IPR001807,PFAM:PF00654;Note=voltage_clc~chloride channel%2C voltage gated;gbkey=misc_feature;locus_tag=GGE_2000 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4608 5451 . - . ID=id-AFQR01000039.1:4608..5451;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4611 5097 . - . ID=id-AFQR01000039.1:4611..5097;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4617 5811 . - . ID=id-AFQR01000039.1:4617..5811;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4626 4845 . - . ID=id-AFQR01000039.1:4626..4845;Dbxref=InterPro:IPR001807;Note=FPrintScan:PR00762~clchannel~chloride channel%2C voltage gated;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4626 4779 . - . ID=id-AFQR01000039.1:4626..4779;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4632 5808 . - . ID=id-AFQR01000039.1:4632..5808;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4632 5760 . - . ID=id-AFQR01000039.1:4632..5760;Dbxref=InterPro:IPR001807;Note=FPrintScan:PR00762~clchannel~chloride channel%2C voltage gated;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4632 5115 . - . ID=id-AFQR01000039.1:4632..5115;Dbxref=InterPro:IPR001807;Note=FPrintScan:PR00762~clchannel~chloride channel%2C voltage gated;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4632 4947 . - . ID=id-AFQR01000039.1:4632..4947;Dbxref=InterPro:IPR001807;Note=FPrintScan:PR00762~clchannel~chloride channel%2C voltage gated;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4632 4662 . - . ID=id-AFQR01000039.1:4632..4662;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4635 5616 . - . ID=id-AFQR01000039.1:4635..5616;Dbxref=InterPro:IPR001807;Note=FPrintScan:PR00762~clchannel~chloride channel%2C voltage gated;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5715 . - . ID=id-AFQR01000039.1:4641..5715;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5604 . - . ID=id-AFQR01000039.1:4641..5604;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5424 . - . ID=id-AFQR01000039.1:4641..5424;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5313 . - . ID=id-AFQR01000039.1:4641..5313;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5211 . - . ID=id-AFQR01000039.1:4641..5211;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 4641 5100 . - . ID=id-AFQR01000039.1:4641..5100;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 5966 6949 . + . ID=gene-GGE_2001;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank CDS 5966 6949 . + 0 ID=cds-EGT79293.1;Parent=gene-GGE_2001;Dbxref=GeneID:1176344,InterPro:IPR001269,InterPro:IPR004653,InterPro:IPR013785,InterPro:IPR018517,PFAM:PF01207,PIR:PIRSF006621,TIGRFAM:TIGR00742,NCBI_GP:EGT79293.1;Name=EGT79293.1;Ontology_term=GO:0008152,GO:0055114,GO:0008033,GO:0003824,GO:0050660,GO:0016491,GO:0017150;gbkey=CDS;gene=dusA;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||,tRNA dihydrouridine synthase activity|0017150||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,tRNA processing|0008033||;locus_tag=GGE_2001;product=tRNA-dihydrouridine synthase A;protein_id=EGT79293.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5966 6947 . + . ID=id-GGE_2001;Dbxref=InterPro:IPR001269;Note=HMMPanther:PTHR11082:SF20~subfamily not named~HMMPanther:PTHR11082~family not named~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5966 6944 . + . ID=id-GGE_2001-2;Note=multi-dom%3B label: PRK11815;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5966 6926 . + . ID=id-GGE_2001-3;Dbxref=InterPro:IPR001269,PIR:PIRSF006621;Note=trna-dihydrouridine synthase~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5993 6695 . + . ID=id-GGE_2001-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5999 6917 . + . ID=id-GGE_2001-5;Dbxref=InterPro:IPR004653,TIGRFAM:TIGR00742;Note=yjbn: trna dihydrouridine synthase a~trna-dihydrouridine synthase%2C tim-barrel%2C yjbn;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5999 6914 . + . ID=id-GGE_2001-6;Note=superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 6002 6683 . + . ID=id-GGE_2001-7;Note=specific~superfamily%3B label: DUS_like_FMN;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 6011 6887 . + . ID=id-GGE_2001-8;Dbxref=InterPro:IPR001269,PFAM:PF01207;Note=dus~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 6347 6356 . + . ID=id-GGE_2001-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dusA;locus_tag=GGE_2001 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 5979 5988 . - . ID=id-AFQR01000039.1:5979..5988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 6023 6245 . - . ID=id-AFQR01000039.1:6023..6245;Dbxref=InterPro:IPR018517;Note=PatternScan:PS01136~upf0034~trna-dihydrouridine synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 7166 7187 . + . ID=id-AFQR01000039.1:7166..7187;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 7702 7992 . - . ID=gene-GGE_2002;Name=GGE_2002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2002 GCA_000222085.2|AFQR01000039.1 Genbank CDS 7702 7992 . - 0 ID=cds-EGT79294.1;Parent=gene-GGE_2002;Dbxref=GeneID:1175276,InterPro:IPR005272,PFAM:PF04175,TIGRFAM:TIGR00743,NCBI_GP:EGT79294.1;Name=EGT79294.1;Note=HI_0636;gbkey=CDS;locus_tag=GGE_2002;product=UPF0381 protein;protein_id=EGT79294.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 7708 7987 . - . ID=id-GGE_2002;Dbxref=InterPro:IPR005272,TIGRFAM:TIGR00743;Note=superfamily~tigr00743: conserved hypothetical protein~conserved hypothetical protein chp00743%3B label: DUF406 superfamily;gbkey=misc_feature;locus_tag=GGE_2002 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 7753 7939 . - . ID=id-GGE_2002-2;Dbxref=InterPro:IPR005272,PFAM:PF04175;Note=duf406~conserved hypothetical protein chp00743;gbkey=misc_feature;locus_tag=GGE_2002 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 7753 7936 . - . ID=id-GGE_2002-3;Note=Gene3D:3.30.70.860;gbkey=misc_feature;locus_tag=GGE_2002 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 7768 7819 . + . ID=id-AFQR01000039.1:7768..7819;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 8015 9019 . - . ID=gene-GGE_2003;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank CDS 8015 9019 . - 0 ID=cds-EGT79295.1;Parent=gene-GGE_2003;Dbxref=GeneID:1174552,InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002306,InterPro:IPR014729,PFAM:PF00579,TIGRFAM:TIGR00233,NCBI_GP:EGT79295.1;Name=EGT79295.1;Ontology_term=GO:0006418,GO:0006412,GO:0006436,GO:0005737,GO:0005524,GO:0004812,GO:0000166,GO:0004830;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,tryptophan-tRNA ligase activity|0004830||;go_process=tRNA aminoacylation for protein translation|0006418||,translation|0006412||,tryptophanyl-tRNA aminoacylation|0006436||;locus_tag=GGE_2003;product=Tryptophanyl-tRNA synthetase;protein_id=EGT79295.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8015 9008 . - . ID=id-GGE_2003;Dbxref=InterPro:IPR002306;Note=HMMPanther:PTHR10055:SF0~tryptophanyl-trna synthetase~HMMPanther:PTHR10055~tryptophanyl-trna synthetase~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8021 9002 . - . ID=id-GGE_2003-2;Dbxref=InterPro:IPR002306,TIGRFAM:TIGR00233;Note=trps: tryptophan--trna ligase~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8021 8999 . - . ID=id-GGE_2003-3;Note=multi-dom%3B label: PRK12282;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8024 8864 . - . ID=id-GGE_2003-4;Dbxref=InterPro:IPR002305,PFAM:PF00579;Note=trna-synt_1b~aminoacyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8027 9002 . - . ID=id-GGE_2003-5;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8027 8621 . - . ID=id-GGE_2003-6;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8030 8855 . - . ID=id-GGE_2003-7;Note=specific~superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8063 8066 . - . ID=id-GGE_2003-8;Dbxref=InterPro:IPR002306;Note=FPrintScan:PR01039~trnasynthtrp~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=trpS;locus_tag=GGE_2003 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8045 8051 . + . ID=id-AFQR01000039.1:8045..8051;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8048 8600 . + . ID=id-AFQR01000039.1:8048..8600;Dbxref=InterPro:IPR002306;Note=FPrintScan:PR01039~trnasynthtrp~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8075 8213 . + . ID=id-AFQR01000039.1:8075..8213;Dbxref=InterPro:IPR002306;Note=FPrintScan:PR01039~trnasynthtrp~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8081 8441 . + . ID=id-AFQR01000039.1:8081..8441;Dbxref=InterPro:IPR002306;Note=FPrintScan:PR01039~trnasynthtrp~tryptophanyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 8372 8633 . + . ID=id-AFQR01000039.1:8372..8633;Note=Gene3D:1.10.240.10;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 9147 9764 . + . ID=gene-GGE_2004;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=GGE_2004 GCA_000222085.2|AFQR01000039.1 Genbank CDS 9147 9764 . + 0 ID=cds-EGT79296.1;Parent=gene-GGE_2004;Dbxref=GeneID:166227526,InterPro:IPR007451,PFAM:PF04356,NCBI_GP:EGT79296.1;Name=EGT79296.1;gbkey=CDS;gene=hflD;locus_tag=GGE_2004;product=High frequency lysogenization protein hflD;protein_id=EGT79296.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9147 9759 . + . ID=id-GGE_2004;Dbxref=InterPro:IPR007451;Note=superfamily~superfamily:SSF101322~ycfc-like~uncharacterised protein family upf0274%3B label: DUF489 superfamily;gbkey=misc_feature;gene=hflD;locus_tag=GGE_2004 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9147 9753 . + . ID=id-GGE_2004-2;Dbxref=InterPro:IPR007451;Note=HAMAP:MF_00695~hfld_protein~uncharacterised protein family upf0274;gbkey=misc_feature;gene=hflD;locus_tag=GGE_2004 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9168 9714 . + . ID=id-GGE_2004-3;Dbxref=InterPro:IPR007451,PFAM:PF04356;Note=duf489~uncharacterised protein family upf0274;gbkey=misc_feature;gene=hflD;locus_tag=GGE_2004 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9174 9723 . + . ID=id-GGE_2004-4;Dbxref=InterPro:IPR007451;Note=BlastProDom:PD037115~q4qms9_haei8_q4qms9~uncharacterised protein family upf0274;gbkey=misc_feature;gene=hflD;locus_tag=GGE_2004 GCA_000222085.2|AFQR01000039.1 Genbank gene 9787 11157 . + . ID=gene-GGE_2005;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank CDS 9787 11157 . + 0 ID=cds-EGT79297.1;Parent=gene-GGE_2005;Dbxref=GeneID:1172761,InterPro:IPR000362,InterPro:IPR004769,InterPro:IPR008948,InterPro:IPR013539,InterPro:IPR020557,InterPro:IPR022761,PFAM:PF00206,PFAM:PF08328,TIGRFAM:TIGR00928,NCBI_GP:EGT79297.1;Name=EGT79297.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018,GO:0003824;gbkey=CDS;gene=purB;go_function=N6-(1 2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||,catalytic activity|0003824||;go_process=IMP biosynthetic process|0006188||,purine ribonucleotide biosynthetic process|0009152||;locus_tag=GGE_2005;product=Adenylosuccinate lyase;protein_id=EGT79297.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9787 11155 . + . ID=id-GGE_2005;Note=multi-dom%3B label: PRK09285;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9787 11152 . + . ID=id-GGE_2005-2;Note=HMMPanther:PTHR11444:SF2~adenylosuccinate lyase~HMMPanther:PTHR11444~family not named;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9787 10138 . + . ID=id-GGE_2005-3;Note=Gene3D:1.10.275.10;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9796 11134 . + . ID=id-GGE_2005-4;Dbxref=InterPro:IPR008948;Note=superfamily:SSF48557~l-aspartase-like~l-aspartase-like;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9823 11122 . + . ID=id-GGE_2005-5;Dbxref=InterPro:IPR004769,TIGRFAM:TIGR00928;Note=purb: adenylosuccinate lyase~adenylosuccinate lyase;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9829 10684 . + . ID=id-GGE_2005-6;Dbxref=InterPro:IPR022761,PFAM:PF00206;Note=lyase_1~lyase 1;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9856 11059 . + . ID=id-GGE_2005-7;Note=specific~superfamily%3B label: Lyase_I_like superfamily;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 10141 10603 . + . ID=id-GGE_2005-8;Note=Gene3D:1.20.200.10;gbkey=misc_feature;gene=purB;locus_tag=GGE_2005 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9804 9813 . - . ID=id-AFQR01000039.1:9804..9813;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9817 10669 . - . ID=id-AFQR01000039.1:9817..10669;Dbxref=InterPro:IPR020557;Note=PatternScan:PS00163~fumarate_lyases~fumarate lyase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9838 10669 . - . ID=id-AFQR01000039.1:9838..10669;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9844 10276 . - . ID=id-AFQR01000039.1:9844..10276;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9844 10138 . - . ID=id-AFQR01000039.1:9844..10138;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9871 10540 . - . ID=id-AFQR01000039.1:9871..10540;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 9955 10957 . - . ID=id-AFQR01000039.1:9955..10957;Note=Gene3D:1.10.40.30;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 10132 10780 . - . ID=id-AFQR01000039.1:10132..10780;Dbxref=InterPro:IPR013539,PFAM:PF08328;Note=asl_c~adenylosuccinate lyase c-terminal/plant;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 11429 11920 . + . ID=gene-GGE_2006;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=GGE_2006 GCA_000222085.2|AFQR01000039.1 Genbank CDS 11429 11920 . + 0 ID=cds-EGT79298.1;Parent=gene-GGE_2006;Dbxref=GeneID:166229730,InterPro:IPR001790,InterPro:IPR002363,InterPro:IPR022973,PFAM:PF00466,NCBI_GP:EGT79298.1;Name=EGT79298.1;Ontology_term=GO:0042254,GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplJ;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=ribosome biogenesis|0042254||,translation|0006412||;locus_tag=GGE_2006;product=50S ribosomal protein L10;protein_id=EGT79298.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11438 11900 . + . ID=id-GGE_2006;Dbxref=InterPro:IPR022973;Note=HMMPanther:PTHR11560:SF8~subfamily not named~HMMPanther:PTHR11560~family not named~HAMAP:MF_00362~ribosomal_l10~ribosomal protein l10;gbkey=misc_feature;gene=rplJ;locus_tag=GGE_2006 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11441 11894 . + . ID=id-GGE_2006-2;Note=specific~superfamily%3B label: Ribosomal_L10;gbkey=misc_feature;gene=rplJ;locus_tag=GGE_2006 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11444 11720 . + . ID=id-GGE_2006-3;Dbxref=InterPro:IPR001790,PFAM:PF00466;Note=ribosomal_l10~ribosomal protein l10/acidic p0;gbkey=misc_feature;gene=rplJ;locus_tag=GGE_2006 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11453 11534 . + . ID=id-GGE_2006-4;Dbxref=InterPro:IPR002363;Note=PatternScan:PS01109~ribosomal_l10~ribosomal protein l10%2C eubacterial%2C conserved site;gbkey=misc_feature;gene=rplJ;locus_tag=GGE_2006 GCA_000222085.2|AFQR01000039.1 Genbank gene 11975 12346 . + . ID=gene-GGE_2007;Name=GGE_2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank CDS 11975 12346 . + 0 ID=cds-EGT79299.1;Parent=gene-GGE_2007;Dbxref=GeneID:16272584,InterPro:IPR000206,InterPro:IPR008932,InterPro:IPR013823,InterPro:IPR014719,PFAM:PF00542,TIGRFAM:TIGR00855,NCBI_GP:EGT79299.1;Name=EGT79299.1;Note=NP_438801;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_2007;product=50S ribosomal protein L7/L12;protein_id=EGT79299.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11975 12344 . + . ID=id-GGE_2007;Dbxref=InterPro:IPR000206,TIGRFAM:TIGR00855;Note=HMMPanther:PTHR11809~family not named~l12: ribosomal protein l7/l12~ribosomal protein l7/l12;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11981 12341 . + . ID=id-GGE_2007-2;Dbxref=InterPro:IPR000206;Note=HAMAP:MF_00368~ribosomal_l7_l12~ribosomal protein l7/l12;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11981 12128 . + . ID=id-GGE_2007-3;Note=Gene3D:1.20.5.710;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11984 12335 . + . ID=id-GGE_2007-4;Note=specific~superfamily%3B label: Ribosomal_L7_L12;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 11984 12146 . + . ID=id-GGE_2007-5;Dbxref=InterPro:IPR008932;Note=superfamily:SSF48300~ribosomal protein l7/12%2C oligomerisation (n-terminal) domain~ribosomal protein l7/l12%2C oligomerisation;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12134 12188 . + . ID=id-GGE_2007-6;Dbxref=InterPro:IPR014719;Note=Gene3D:3.30.1390.10~ribosomal protein l7/l12/adaptor protein clps-like;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12143 12179 . + . ID=id-GGE_2007-7;Dbxref=InterPro:IPR013823,InterPro:IPR014719,PFAM:PF00542;Note=ribosomal_l12~ribosomal protein l7/l12~superfamily:SSF54736~clps-like~ribosomal protein l7/l12/adaptor protein clps-like;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12149 12173 . + . ID=id-GGE_2007-8;Dbxref=InterPro:IPR013823;Note=BlastProDom:PD001326~q57h70_salch_q57h70~ribosomal protein l7/l12;gbkey=misc_feature;locus_tag=GGE_2007 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12017 12284 . - . ID=id-AFQR01000039.1:12017..12284;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12026 12080 . - . ID=id-AFQR01000039.1:12026..12080;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12041 12284 . - . ID=id-AFQR01000039.1:12041..12284;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 12502 13872 . + . ID=gene-GGE_2008;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank CDS 12502 13872 . + 0 ID=cds-EGT79300.1;Parent=gene-GGE_2008;Dbxref=GeneID:166226101,InterPro:IPR005835,InterPro:IPR005882,InterPro:IPR011004,InterPro:IPR018357,PFAM:PF00483,TIGRFAM:TIGR01173,NCBI_GP:EGT79300.1;Name=EGT79300.1;Ontology_term=GO:0009058,GO:0000902,GO:0009103,GO:0009252,GO:0005737,GO:0003977,GO:0019134,GO:0000287,GO:0016779,GO:0016740;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||,glucosamine-1-phosphate N-acetyltransferase activity|0019134||,magnesium ion binding|0000287||,nucleotidyltransferase activity|0016779||,transferase activity|0016740||;go_process=biosynthetic process|0009058||,cell morphogenesis|0000902||,lipopolysaccharide biosynthetic process|0009103||,peptidoglycan biosynthetic process|0009252||;locus_tag=GGE_2008;product=N-acetylglucosamine-1-phosphate uridyltransferase-like protein;protein_id=EGT79300.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12502 13870 . + . ID=id-GGE_2008;Note=multi-dom%3B label: glmU;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12508 13228 . + . ID=id-GGE_2008-2;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12511 13861 . + . ID=id-GGE_2008-3;Note=HMMPanther:PTHR22572:SF17~udp-n-acetylglucosamine pyrophosphorylase-related~HMMPanther:PTHR22572~family not named;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12514 13252 . + . ID=id-GGE_2008-4;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12517 13846 . + . ID=id-GGE_2008-5;Dbxref=InterPro:IPR005882;Note=HAMAP:MF_01631~glmu~bifunctional udp-n-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate n-acetyltransferase;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12520 13852 . + . ID=id-GGE_2008-6;Dbxref=InterPro:IPR005882,TIGRFAM:TIGR01173;Note=glmu: udp-n-acetylglucosamine diphosphorylas~bifunctional udp-n-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate n-acetyltransferase;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12526 13177 . + . ID=id-GGE_2008-7;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12526 13105 . + . ID=id-GGE_2008-8;Dbxref=InterPro:IPR005835,PFAM:PF00483;Note=ntp_transferase~nucleotidyl transferase;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 13129 13243 . + . ID=id-GGE_2008-9;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature;gene=glmU;locus_tag=GGE_2008 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12535 13756 . - . ID=id-AFQR01000039.1:12535..13756;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12589 13711 . - . ID=id-AFQR01000039.1:12589..13711;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12742 13234 . - . ID=id-AFQR01000039.1:12742..13234;Note=Gene3D:2.160.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 12898 13474 . - . ID=id-AFQR01000039.1:12898..13474;Note=Gene3D:2.160.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 13081 13255 . - . ID=id-AFQR01000039.1:13081..13255;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 13858 14596 . + . ID=id-GeneID:1841333-3;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000039.1 Genbank gene 13989 14453 . - . ID=gene-GGE_2009;Name=GGE_2009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_2009 GCA_000222085.2|AFQR01000039.1 Genbank CDS 13989 14453 . - 0 ID=cds-EGT79301.1;Parent=gene-GGE_2009;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT79301.1;Name=EGT79301.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_2009;product=transposase like protein;protein_id=EGT79301.1;transl_table=11 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 14004 14382 . - . ID=id-GGE_2009;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2009 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 14007 14382 . - . ID=id-GGE_2009-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2009 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 14034 14346 . - . ID=id-GGE_2009-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_2009 GCA_000222085.2|AFQR01000039.1 Genbank sequence_feature 14037 14343 . - . ID=id-GGE_2009-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_2009 ##sequence-region AFQR01000038.1 1 29174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000038.1 Genbank region 1 29174 . + . ID=AFQR01000038.1:1..29174;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000038.1 Genbank gene 1441 2055 . - . ID=gene-GGE_1964;Name=GGE_1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1964 GCA_000222085.2|AFQR01000038.1 Genbank CDS 1441 2055 . - 0 ID=cds-EGT79323.1;Parent=gene-GGE_1964;Dbxref=GeneID:148827522,InterPro:IPR021283,PFAM:PF11041,NCBI_GP:EGT79323.1;Name=EGT79323.1;Note=YP_001292275~CGSHiGG_04735;gbkey=CDS;locus_tag=GGE_1964;product=Hypothetical protein;protein_id=EGT79323.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 1498 1984 . - . ID=id-GGE_1964;Dbxref=InterPro:IPR021283,PFAM:PF11041;Note=duf2612~protein of unknown function duf2612;gbkey=misc_feature;locus_tag=GGE_1964 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 1612 1783 . - . ID=id-GGE_1964-2;Note=superfamily%3B label: DUF2612 superfamily;gbkey=misc_feature;locus_tag=GGE_1964 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 1483 1522 . + . ID=id-AFQR01000038.1:1483..1522;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 2064 3500 . - . ID=gene-GGE_1965;Name=GGE_1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1965 GCA_000222085.2|AFQR01000038.1 Genbank CDS 2064 3500 . - 0 ID=cds-EGT79324.1;Parent=gene-GGE_1965;Dbxref=GeneID:229844523,NCBI_GP:EGT79324.1;Name=EGT79324.1;Note=ZP_04464663~CGSHi6P18H1_09415;gbkey=CDS;locus_tag=GGE_1965;product=Hypothetical protein;protein_id=EGT79324.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 2118 2343 . - . ID=id-GGE_1965;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_1965 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 2097 2820 . + . ID=id-AFQR01000038.1:2097..2820;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 2873 2882 . + . ID=id-AFQR01000038.1:2873..2882;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 3493 3858 . - . ID=gene-GGE_1966;Name=GGE_1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1966 GCA_000222085.2|AFQR01000038.1 Genbank CDS 3493 3858 . - 0 ID=cds-EGT79325.1;Parent=gene-GGE_1966;Dbxref=GeneID:319896715,NCBI_GP:EGT79325.1;Name=EGT79325.1;Note=YP_004134908;gbkey=CDS;locus_tag=GGE_1966;product=Hypothetical protein;protein_id=EGT79325.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 3855 4526 . - . ID=gene-GGE_1967;Name=GGE_1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1967 GCA_000222085.2|AFQR01000038.1 Genbank CDS 3855 4526 . - 0 ID=cds-EGT79326.1;Parent=gene-GGE_1967;Dbxref=GeneID:145629837,InterPro:IPR013046,TIGRFAM:TIGR01644,NCBI_GP:EGT79326.1;Name=EGT79326.1;Note=ZP_01785631;gbkey=CDS;locus_tag=GGE_1967;product=putative phage-related baseplate assembly protein V;protein_id=EGT79326.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 4029 4353 . - . ID=id-GGE_1967;Dbxref=InterPro:IPR013046,TIGRFAM:TIGR01644;Note=phage_p2_v: phage baseplate assembly prote~phage-related baseplate assembly protein v;gbkey=misc_feature;locus_tag=GGE_1967 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 3894 4320 . + . ID=id-AFQR01000038.1:3894..4320;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 3912 4392 . + . ID=id-AFQR01000038.1:3912..4392;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 4501 4510 . + . ID=id-AFQR01000038.1:4501..4510;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 4529 5485 . - . ID=gene-GGE_1968;Name=GGE_1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1968 GCA_000222085.2|AFQR01000038.1 Genbank CDS 4529 5485 . - 0 ID=cds-EGT79327.1;Parent=gene-GGE_1968;Dbxref=GeneID:145629836,NCBI_GP:EGT79327.1;Name=EGT79327.1;Note=ZP_01785630~CGSHi22121_00987;gbkey=CDS;locus_tag=GGE_1968;product=Hypothetical protein;protein_id=EGT79327.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 5482 5796 . - . ID=gene-GGE_1969;Name=GGE_1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1969 GCA_000222085.2|AFQR01000038.1 Genbank CDS 5482 5796 . - 0 ID=cds-EGT79328.1;Parent=gene-GGE_1969;Dbxref=GeneID:68249901,NCBI_GP:EGT79328.1;Name=EGT79328.1;Note=YP_249013;gbkey=CDS;locus_tag=GGE_1969;product=Hypothetical protein;protein_id=EGT79328.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 5793 6374 . - . ID=gene-GGE_1970;Name=GGE_1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1970 GCA_000222085.2|AFQR01000038.1 Genbank CDS 5793 6374 . - 0 ID=cds-EGT79329.1;Parent=gene-GGE_1970;Dbxref=GeneID:319896719,NCBI_GP:EGT79329.1;Name=EGT79329.1;Note=YP_004134912;gbkey=CDS;locus_tag=GGE_1970;product=Hypothetical protein;protein_id=EGT79329.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 5850 6258 . + . ID=id-AFQR01000038.1:5850..6258;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6453 6462 . - . ID=id-AFQR01000038.1:6453..6462;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 6465 8933 . - . ID=gene-GGE_1971;Name=GGE_1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1971 GCA_000222085.2|AFQR01000038.1 Genbank CDS 6465 8933 . - 0 ID=cds-EGT79330.1;Parent=gene-GGE_1971;Dbxref=GeneID:68249898,InterPro:IPR013491,TIGRFAM:TIGR02675,NCBI_GP:EGT79330.1;Name=EGT79330.1;Note=YP_249010;gbkey=CDS;locus_tag=GGE_1971;product=phage-like minor tail protein;protein_id=EGT79330.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 8346 . + . ID=id-AFQR01000038.1:6534..8346;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 8268 . + . ID=id-AFQR01000038.1:6534..8268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 8034 . + . ID=id-AFQR01000038.1:6534..8034;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 7923 . + . ID=id-AFQR01000038.1:6534..7923;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 7506 . + . ID=id-AFQR01000038.1:6534..7506;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6534 7410 . + . ID=id-AFQR01000038.1:6534..7410;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6537 7503 . + . ID=id-AFQR01000038.1:6537..7503;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6543 7023 . + . ID=id-AFQR01000038.1:6543..7023;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6591 7101 . + . ID=id-AFQR01000038.1:6591..7101;Note=superfamily%3B label: COG3941 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6687 8412 . + . ID=id-AFQR01000038.1:6687..8412;Note=HMMPanther:PTHR23241~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 6690 7002 . + . ID=id-AFQR01000038.1:6690..7002;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675;Note=tape_meas_nterm: tape measure domain~tape measure domain;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 8930 9082 . - . ID=gene-GGE_1972;Name=GGE_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1972 GCA_000222085.2|AFQR01000038.1 Genbank CDS 8930 9082 . - 0 ID=cds-EGT79331.1;Parent=gene-GGE_1972;Dbxref=GeneID:68249897,NCBI_GP:EGT79331.1;Name=EGT79331.1;Note=YP_249009;gbkey=CDS;locus_tag=GGE_1972;product=Hypothetical protein;protein_id=EGT79331.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 9118 9600 . - . ID=gene-GGE_1973;Name=GGE_1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1973 GCA_000222085.2|AFQR01000038.1 Genbank CDS 9118 9600 . - 0 ID=cds-EGT79332.1;Parent=gene-GGE_1973;Dbxref=GeneID:68249896,NCBI_GP:EGT79332.1;Name=EGT79332.1;Note=YP_249008;gbkey=CDS;locus_tag=GGE_1973;product=Hypothetical protein;protein_id=EGT79332.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 9600 10025 . - . ID=gene-GGE_1974;Name=GGE_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1974 GCA_000222085.2|AFQR01000038.1 Genbank CDS 9600 10025 . - 0 ID=cds-EGT79333.1;Parent=gene-GGE_1974;Dbxref=GeneID:145629830,InterPro:IPR021695,PFAM:PF11681,NCBI_GP:EGT79333.1;Name=EGT79333.1;Note=ZP_01785624~CGSHi22121_00957;gbkey=CDS;locus_tag=GGE_1974;product=Hypothetical protein;protein_id=EGT79333.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 9633 9636 . - . ID=id-GGE_1974;Note=seg;gbkey=misc_feature;locus_tag=GGE_1974 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 9687 9777 . - . ID=id-GGE_1974-2;Dbxref=InterPro:IPR021695,PFAM:PF11681;Note=duf3277~protein of unknown function duf3277;gbkey=misc_feature;locus_tag=GGE_1974 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 9687 9768 . - . ID=id-GGE_1974-3;Note=superfamily%3B label: DUF3277 superfamily;gbkey=misc_feature;locus_tag=GGE_1974 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 10044 10053 . - . ID=id-AFQR01000038.1:10044..10053;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 10071 11150 . - . ID=gene-GGE_1975;Name=GGE_1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1975 GCA_000222085.2|AFQR01000038.1 Genbank CDS 10071 11150 . - 0 ID=cds-EGT79334.1;Parent=gene-GGE_1975;Dbxref=GeneID:145629829,InterPro:IPR021808,PFAM:PF11863,NCBI_GP:EGT79334.1;Name=EGT79334.1;Note=ZP_01785623~CGSHi22121_00952;gbkey=CDS;locus_tag=GGE_1975;product=Hypothetical protein;protein_id=EGT79334.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 10086 10530 . - . ID=id-GGE_1975;Note=multi-dom%3B label: DUF3383;gbkey=misc_feature;locus_tag=GGE_1975 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 10089 10317 . - . ID=id-GGE_1975-2;Dbxref=InterPro:IPR021808,PFAM:PF11863;Note=duf3383~protein of unknown function duf3383;gbkey=misc_feature;locus_tag=GGE_1975 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 10329 10884 . - . ID=id-GGE_1975-3;Note=multi-dom%3B label: DUF3383;gbkey=misc_feature;locus_tag=GGE_1975 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 10332 10878 . - . ID=id-GGE_1975-4;Dbxref=InterPro:IPR021808,PFAM:PF11863;Note=duf3383~protein of unknown function duf3383;gbkey=misc_feature;locus_tag=GGE_1975 GCA_000222085.2|AFQR01000038.1 Genbank gene 11131 11637 . - . ID=gene-GGE_1976;Name=GGE_1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1976 GCA_000222085.2|AFQR01000038.1 Genbank CDS 11131 11637 . - 0 ID=cds-EGT79335.1;Parent=gene-GGE_1976;Dbxref=GeneID:148827534,NCBI_GP:EGT79335.1;Name=EGT79335.1;Note=YP_001292287~CGSHiGG_04795;gbkey=CDS;locus_tag=GGE_1976;product=Hypothetical protein;protein_id=EGT79335.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 11639 11998 . - . ID=gene-GGE_1977;Name=GGE_1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1977 GCA_000222085.2|AFQR01000038.1 Genbank CDS 11639 11998 . - 0 ID=cds-EGT79336.1;Parent=gene-GGE_1977;Dbxref=GeneID:145629827,NCBI_GP:EGT79336.1;Name=EGT79336.1;Note=ZP_01785621~CGSHi22121_00942;gbkey=CDS;locus_tag=GGE_1977;product=Hypothetical protein;protein_id=EGT79336.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 11998 12456 . - . ID=gene-GGE_1978;Name=GGE_1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1978 GCA_000222085.2|AFQR01000038.1 Genbank CDS 11998 12456 . - 0 ID=cds-EGT79337.1;Parent=gene-GGE_1978;Dbxref=GeneID:148827536,NCBI_GP:EGT79337.1;Name=EGT79337.1;Note=YP_001292289~CGSHiGG_04805;gbkey=CDS;locus_tag=GGE_1978;product=Hypothetical protein;protein_id=EGT79337.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 12022 12379 . + . ID=id-AFQR01000038.1:12022..12379;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 12449 12799 . - . ID=gene-GGE_1979;Name=GGE_1979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1979 GCA_000222085.2|AFQR01000038.1 Genbank CDS 12449 12799 . - 0 ID=cds-EGT79338.1;Parent=gene-GGE_1979;Dbxref=GeneID:68249890,NCBI_GP:EGT79338.1;Name=EGT79338.1;Note=YP_249002;gbkey=CDS;locus_tag=GGE_1979;product=Hypothetical protein;protein_id=EGT79338.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 12488 12647 . + . ID=id-AFQR01000038.1:12488..12647;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 12488 12587 . + . ID=id-AFQR01000038.1:12488..12587;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 12803 12991 . - . ID=gene-GGE_1980;Name=GGE_1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1980 GCA_000222085.2|AFQR01000038.1 Genbank CDS 12803 12991 . - 0 ID=cds-EGT79339.1;Parent=gene-GGE_1980;Dbxref=GeneID:148827538,NCBI_GP:EGT79339.1;Name=EGT79339.1;Note=YP_001292291~CGSHiGG_04815;gbkey=CDS;locus_tag=GGE_1980;product=Hypothetical protein;protein_id=EGT79339.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 12994 13995 . - . ID=gene-GGE_1981;Name=GGE_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1981 GCA_000222085.2|AFQR01000038.1 Genbank CDS 12994 13995 . - 0 ID=cds-EGT79340.1;Parent=gene-GGE_1981;Dbxref=GeneID:319775732,InterPro:IPR020049,PFAM:PF09950,NCBI_GP:EGT79340.1;Name=EGT79340.1;Note=YP_004138220~HICON_10750;gbkey=CDS;locus_tag=GGE_1981;product=Hypothetical protein;protein_id=EGT79340.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 13282 13705 . - . ID=id-GGE_1981;Note=superfamily%3B label: Linocin_M18 superfamily;gbkey=misc_feature;locus_tag=GGE_1981 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 13282 13702 . - . ID=id-GGE_1981-2;Dbxref=InterPro:IPR020049,PFAM:PF09950;Note=duf2184~protein of unknown function duf2184;gbkey=misc_feature;locus_tag=GGE_1981 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 13015 13450 . + . ID=id-AFQR01000038.1:13015..13450;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 14003 14422 . - . ID=gene-GGE_1982;Name=GGE_1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1982 GCA_000222085.2|AFQR01000038.1 Genbank CDS 14003 14422 . - 0 ID=cds-EGT79341.1;Parent=gene-GGE_1982;Dbxref=GeneID:68249887,NCBI_GP:EGT79341.1;Name=EGT79341.1;Note=YP_248999;gbkey=CDS;locus_tag=GGE_1982;product=Hypothetical protein;protein_id=EGT79341.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 14435 15508 . - . ID=gene-GGE_1983;Name=GGE_1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank CDS 14435 15508 . - 0 ID=cds-EGT79342.1;Parent=gene-GGE_1983;Dbxref=InterPro:IPR006141,InterPro:IPR016913,PFAM:PF09979,PIR:PIRSF029215,NCBI_GP:EGT79342.1;Name=EGT79342.1;Note=ZP_05850888;Ontology_term=GO:0016539;gbkey=CDS;go_process=intein-mediated protein splicing|0016539||;locus_tag=GGE_1983;product=putative uncharacterized;protein_id=EGT79342.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14435 15503 . - . ID=id-GGE_1983;Dbxref=InterPro:IPR016913,PIR:PIRSF029215;Note=uncharacterised conserved protein%2C ucp029215 type~uncharacterised conserved protein ucp029215;gbkey=misc_feature;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14468 15350 . - . ID=id-GGE_1983-2;Note=multi-dom%3B label: COG3566;gbkey=misc_feature;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14474 14870 . - . ID=id-GGE_1983-3;Note=superfamily%3B label: DUF2213 superfamily;gbkey=misc_feature;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14489 14603 . - . ID=id-GGE_1983-4;Dbxref=InterPro:IPR006141;Note=ProfileScan:PS50817~intein_n_ter~intein splice site;gbkey=misc_feature;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14525 14828 . - . ID=id-GGE_1983-5;Dbxref=InterPro:IPR016913,PFAM:PF09979;Note=duf2213~uncharacterised conserved protein ucp029215;gbkey=misc_feature;locus_tag=GGE_1983 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14468 14909 . + . ID=id-AFQR01000038.1:14468..14909;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 14585 15056 . + . ID=id-AFQR01000038.1:14585..15056;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 15634 16851 . - . ID=gene-GGE_1984;Name=GGE_1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1984 GCA_000222085.2|AFQR01000038.1 Genbank CDS 15634 16851 . - 0 ID=cds-EGT79343.1;Parent=gene-GGE_1984;Dbxref=GeneID:319775729,InterPro:IPR006528,PFAM:PF04233,TIGRFAM:TIGR01641,NCBI_GP:EGT79343.1;Name=EGT79343.1;Note=YP_004138217;gbkey=CDS;locus_tag=GGE_1984;product=putative phage putative head morphogenesis protein%2C SPP1 Gp7;protein_id=EGT79343.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 15643 16354 . - . ID=id-GGE_1984;Note=multi-dom%3B label: COG2369;gbkey=misc_feature;locus_tag=GGE_1984 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 15688 16453 . + . ID=id-AFQR01000038.1:15688..16453;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 15946 16030 . + . ID=id-AFQR01000038.1:15946..16030;Dbxref=InterPro:IPR006528,PFAM:PF04233;Note=phage_mu_f~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 15946 16027 . + . ID=id-AFQR01000038.1:15946..16027;Note=superfamily%3B label: Phage_Mu_F superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 15958 16033 . + . ID=id-AFQR01000038.1:15958..16033;Dbxref=InterPro:IPR006528,TIGRFAM:TIGR01641;Note=phagespp1_gp7: phage putative head morp~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 16743 16752 . + . ID=id-AFQR01000038.1:16743..16752;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 16832 18148 . - . ID=gene-GGE_1985;Name=GGE_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1985 GCA_000222085.2|AFQR01000038.1 Genbank CDS 16832 18148 . - 0 ID=cds-EGT79344.1;Parent=gene-GGE_1985;Dbxref=GeneID:319775728,PFAM:PF06381,NCBI_GP:EGT79344.1;Name=EGT79344.1;Note=YP_004138216;gbkey=CDS;locus_tag=GGE_1985;product=Hypothetical protein;protein_id=EGT79344.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 16925 17882 . - . ID=id-GGE_1985;Note=superfamily%3B label: COG3567 superfamily;gbkey=misc_feature;locus_tag=GGE_1985 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 16928 17873 . - . ID=id-GGE_1985-2;Dbxref=PFAM:PF06381;Note=multi-dom~duf1073%3B label: DUF1073;gbkey=misc_feature;locus_tag=GGE_1985 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 18066 18075 . + . ID=id-AFQR01000038.1:18066..18075;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 18150 19544 . - . ID=gene-GGE_1986;Name=GGE_1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1986 GCA_000222085.2|AFQR01000038.1 Genbank CDS 18150 19544 . - 0 ID=cds-EGT79345.1;Parent=gene-GGE_1986;Dbxref=InterPro:IPR006437,InterPro:IPR006701,PFAM:PF04466,TIGRFAM:TIGR01547,NCBI_GP:EGT79345.1;Name=EGT79345.1;Note=HI_1410;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_1986;product=putative phage terminase%2C large subunit%2C PBSX;protein_id=EGT79345.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 18246 19350 . - . ID=id-GGE_1986;Dbxref=InterPro:IPR006437,TIGRFAM:TIGR01547;Note=phage_term_2: phage terminase%2C large sub~phage terminase%2C large subunit%2C pbsx;gbkey=misc_feature;locus_tag=GGE_1986 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 18249 19404 . - . ID=id-GGE_1986-2;Dbxref=InterPro:IPR006701,PFAM:PF04466;Note=terminase_3~phage terminase large subunit;gbkey=misc_feature;locus_tag=GGE_1986 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 18372 19281 . - . ID=id-GGE_1986-3;Note=superfamily%3B label: Terminase_3 superfamily;gbkey=misc_feature;locus_tag=GGE_1986 GCA_000222085.2|AFQR01000038.1 Genbank gene 19489 20007 . - . ID=gene-GGE_1987;Name=GGE_1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1987 GCA_000222085.2|AFQR01000038.1 Genbank CDS 19489 20007 . - 0 ID=cds-EGT79346.1;Parent=gene-GGE_1987;Dbxref=InterPro:IPR005335,PFAM:PF03592,NCBI_GP:EGT79346.1;Name=EGT79346.1;Note=HI_1411;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_1987;product=putative terminase small subunit;protein_id=EGT79346.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 19531 19951 . - . ID=id-GGE_1987;Note=superfamily%3B label: Terminase_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1987 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 19531 19909 . - . ID=id-GGE_1987-2;Dbxref=InterPro:IPR005335,PFAM:PF03592;Note=terminase_2~terminase small subunit;gbkey=misc_feature;locus_tag=GGE_1987 GCA_000222085.2|AFQR01000038.1 Genbank gene 20085 20336 . + . ID=gene-GGE_1988;Name=GGE_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1988 GCA_000222085.2|AFQR01000038.1 Genbank CDS 20085 20336 . + 0 ID=cds-EGT79347.1;Parent=gene-GGE_1988;Dbxref=GeneID:145631712,InterPro:IPR007712,PFAM:PF05016,NCBI_GP:EGT79347.1;Name=EGT79347.1;Note=ZP_01787474;gbkey=CDS;locus_tag=GGE_1988;product=putative plasmid stabilization system;protein_id=EGT79347.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20085 20325 . + . ID=id-GGE_1988;Note=superfamily~superfamily:SSF143011~ssf143011%3B label: Plasmid_stabil superfamily;gbkey=misc_feature;locus_tag=GGE_1988 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20097 20310 . + . ID=id-GGE_1988-2;Dbxref=InterPro:IPR007712,PFAM:PF05016;Note=plasmid_stabil~plasmid stabilization system;gbkey=misc_feature;locus_tag=GGE_1988 GCA_000222085.2|AFQR01000038.1 Genbank gene 20320 20667 . + . ID=gene-GGE_1989;Name=GGE_1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1989 GCA_000222085.2|AFQR01000038.1 Genbank CDS 20320 20667 . + 0 ID=cds-EGT79348.1;Parent=gene-GGE_1989;Dbxref=GeneID:229844499,InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT79348.1;Name=EGT79348.1;Note=ZP_04464639;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1989;product=transcriptional regulator%2C XRE family protein;protein_id=EGT79348.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20479 20500 . - . ID=id-AFQR01000038.1:20479..20500;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20482 20500 . - . ID=id-AFQR01000038.1:20482..20500;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20485 20497 . - . ID=id-AFQR01000038.1:20485..20497;Note=Gene3D:1.10.260.40;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20488 20494 . - . ID=id-AFQR01000038.1:20488..20494;Dbxref=InterPro:IPR010982;Note=specific~superfamily~superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding%3B label: HTH_XRE;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 20862 21185 . - . ID=gene-GGE_1990;Name=GGE_1990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1990 GCA_000222085.2|AFQR01000038.1 Genbank CDS 20862 21185 . - 0 ID=cds-EGT79349.1;Parent=gene-GGE_1990;Dbxref=GeneID:145629500,InterPro:IPR020319,InterPro:IPR022538,PFAM:PF10828,NCBI_GP:EGT79349.1;Name=EGT79349.1;Note=ZP_01785298;gbkey=CDS;locus_tag=GGE_1990;product=Hypothetical protein;protein_id=EGT79349.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20862 21183 . - . ID=id-GGE_1990;Dbxref=InterPro:IPR020319,InterPro:IPR022538,PFAM:PF10828;Note=superfamily~duf2570~protein of unknown function duf2570~BlastProDom:PD064145~q4qkc3_haei8_q4qkc3~uncharacterised protein family hi1414%3B label: DUF2570 superfamily;gbkey=misc_feature;locus_tag=GGE_1990 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20877 20931 . - . ID=id-GGE_1990-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1990 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20889 20898 . - . ID=id-GGE_1990-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1990 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20943 21012 . - . ID=id-GGE_1990-4;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1990 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 20907 20955 . + . ID=id-AFQR01000038.1:20907..20955;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 21178 21780 . - . ID=gene-GGE_1991;Name=GGE_1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1991 GCA_000222085.2|AFQR01000038.1 Genbank CDS 21178 21780 . - 0 ID=cds-EGT79350.1;Parent=gene-GGE_1991;Dbxref=GeneID:1175789,InterPro:IPR000726,InterPro:IPR023346,PFAM:PF00182,NCBI_GP:EGT79350.1;Name=EGT79350.1;Note=HI_1415;Ontology_term=GO:0016998,GO:0006032,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||;go_process=cell wall macromolecule catabolic process|0016998||,chitin catabolic process|0006032||;locus_tag=GGE_1991;product=putative lysozyme-like domain-containing protein;protein_id=EGT79350.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21187 21757 . - . ID=id-GGE_1991;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature;locus_tag=GGE_1991 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21193 21643 . - . ID=id-GGE_1991-2;Note=superfamily%3B label: lysozyme_like superfamily;gbkey=misc_feature;locus_tag=GGE_1991 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21301 21619 . - . ID=id-GGE_1991-3;Note=HMMPanther:PTHR22595:SF17~lytic enzyme~HMMPanther:PTHR22595~family not named;gbkey=misc_feature;locus_tag=GGE_1991 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21325 21517 . + . ID=id-AFQR01000038.1:21325..21517;Note=Gene3D:1.10.530.10;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21337 21505 . + . ID=id-AFQR01000038.1:21337..21505;Dbxref=InterPro:IPR000726,PFAM:PF00182;Note=glyco_hydro_19~glycoside hydrolase%2C family 19%2C catalytic;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 21746 22105 . - . ID=gene-GGE_1992;Name=GGE_1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1992 GCA_000222085.2|AFQR01000038.1 Genbank CDS 21746 22105 . - 0 ID=cds-EGT79351.1;Parent=gene-GGE_1992;Dbxref=GeneID:1175790,InterPro:IPR006481,PFAM:PF05106,TIGRFAM:TIGR01594,NCBI_GP:EGT79351.1;Name=EGT79351.1;Note=HI_1416;gbkey=CDS;locus_tag=GGE_1992;product=putative holin%2C phage lambda;protein_id=EGT79351.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21746 22076 . - . ID=id-GGE_1992;Dbxref=InterPro:IPR006481,TIGRFAM:TIGR01594;Note=superfamily~holin_lambda: phage holin%2C lambda family~holin%2C phage lambda%3B label: Phage_holin_3 superfamily;gbkey=misc_feature;locus_tag=GGE_1992 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21758 22052 . - . ID=id-GGE_1992-2;Dbxref=InterPro:IPR006481,PFAM:PF05106;Note=phage_holin_3~holin%2C phage lambda;gbkey=misc_feature;locus_tag=GGE_1992 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21791 21815 . - . ID=id-GGE_1992-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1992 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 21815 21896 . + . ID=id-AFQR01000038.1:21815..21896;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 22298 22471 . - . ID=gene-GGE_1993;Name=GGE_1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1993 GCA_000222085.2|AFQR01000038.1 Genbank CDS 22298 22471 . - 0 ID=cds-EGT79352.1;Parent=gene-GGE_1993;Dbxref=GeneID:145631707,NCBI_GP:EGT79352.1;Name=EGT79352.1;Note=ZP_01787469~CGSHi22421_00922;gbkey=CDS;locus_tag=GGE_1993;product=Hypothetical protein;protein_id=EGT79352.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank gene 22830 23342 . - . ID=gene-GGE_1994;Name=GGE_1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1994 GCA_000222085.2|AFQR01000038.1 Genbank CDS 22830 23342 . - 0 ID=cds-EGT79353.1;Parent=gene-GGE_1994;Dbxref=GeneID:145631706,NCBI_GP:EGT79353.1;Name=EGT79353.1;Note=ZP_01787468~CGSHi22421_00917;gbkey=CDS;locus_tag=GGE_1994;product=Hypothetical protein;protein_id=EGT79353.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23572 23764 . - . ID=id-AFQR01000038.1:23572..23764;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding~Gene3D:1.10.260.40;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23587 23743 . - . ID=id-AFQR01000038.1:23587..23743;Note=specific~superfamily%3B label: HTH_XRE;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23596 23734 . - . ID=id-AFQR01000038.1:23596..23734;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3~ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23761 24064 . + . ID=id-AFQR01000038.1:23761..24064;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23767 24079 . + . ID=id-AFQR01000038.1:23767..24079;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23851 24037 . + . ID=id-AFQR01000038.1:23851..24037;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 23896 24001 . + . ID=id-AFQR01000038.1:23896..24001;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 24467 24673 . + . ID=gene-GGE_1995;Name=GGE_1995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1995 GCA_000222085.2|AFQR01000038.1 Genbank CDS 24467 24673 . + 0 ID=cds-EGT79354.1;Parent=gene-GGE_1995;Dbxref=GeneID:145629808,InterPro:IPR010982,NCBI_GP:EGT79354.1;Name=EGT79354.1;Note=ZP_01785602;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1995;product=putative lambda repressor-like%2C DNA-binding protein;protein_id=EGT79354.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 24479 24656 . + . ID=id-GGE_1995;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1995 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 24479 24638 . + . ID=id-GGE_1995-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1995 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25181 25583 . - . ID=id-AFQR01000038.1:25181..25583;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25208 25469 . + . ID=id-AFQR01000038.1:25208..25469;Dbxref=InterPro:IPR017880;Note=ProfileScan:PS51301~kila_n~kila;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25211 25523 . + . ID=id-AFQR01000038.1:25211..25523;Dbxref=InterPro:IPR017880;Note=ProfileScan:PS51301~kila_n~kila;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25238 25499 . + . ID=id-AFQR01000038.1:25238..25499;Dbxref=InterPro:IPR018004,PFAM:PF04383;Note=kila-n~kila/apses-type hth%2C dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25238 25439 . + . ID=id-AFQR01000038.1:25238..25439;Dbxref=InterPro:IPR018004,PFAM:PF04383;Note=kila-n~kila/apses-type hth%2C dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25241 25583 . - . ID=id-AFQR01000038.1:25241..25583;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25247 25484 . + . ID=id-AFQR01000038.1:25247..25484;Note=superfamily%3B label: KilA-N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25247 25424 . + . ID=id-AFQR01000038.1:25247..25424;Note=superfamily%3B label: KilA-N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25445 25628 . - . ID=id-AFQR01000038.1:25445..25628;Note=superfamily%3B label: ANT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25460 25604 . - . ID=id-AFQR01000038.1:25460..25604;Dbxref=InterPro:IPR005039,PFAM:PF03374;Note=ant~phage antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25505 25628 . - . ID=id-AFQR01000038.1:25505..25628;Note=superfamily%3B label: ANT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 25520 25604 . - . ID=id-AFQR01000038.1:25520..25604;Dbxref=InterPro:IPR005039,PFAM:PF03374;Note=ant~phage antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 26691 26700 . + . ID=id-AFQR01000038.1:26691..26700;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 26730 27054 . + . ID=id-AFQR01000038.1:26730..27054;Dbxref=InterPro:IPR009731,PFAM:PF06992;Note=phage_lambda_p~replication p;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 26736 27057 . + . ID=id-AFQR01000038.1:26736..27057;Note=superfamily%3B label: Phage_lambda_P superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27170 27179 . + . ID=id-AFQR01000038.1:27170..27179;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27314 27851 . + . ID=id-AFQR01000038.1:27314..27851;Dbxref=InterPro:IPR008593,PFAM:PF05869;Note=dam~dna n-6-adenine-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27320 27854 . + . ID=id-AFQR01000038.1:27320..27854;Note=superfamily%3B label: Dam superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank gene 27877 28800 . + . ID=gene-GGE_1996;Name=GGE_1996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank CDS 27877 28800 . + 0 ID=cds-EGT79355.1;Parent=gene-GGE_1996;Dbxref=GeneID:68249872,NCBI_GP:EGT79355.1;Name=EGT79355.1;Note=YP_248984;gbkey=CDS;locus_tag=GGE_1996;product=Hypothetical protein;protein_id=EGT79355.1;transl_table=11 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27886 28471 . + . ID=id-GGE_1996;Note=multi-dom%3B label: N6_Mtase;gbkey=misc_feature;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27907 28555 . + . ID=id-GGE_1996-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27991 28429 . + . ID=id-GGE_1996-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 28003 28072 . + . ID=id-GGE_1996-4;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 28156 28219 . + . ID=id-GGE_1996-5;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature;locus_tag=GGE_1996 GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27898 28177 . - . ID=id-AFQR01000038.1:27898..28177;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 27916 28201 . - . ID=id-AFQR01000038.1:27916..28201;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000038.1 Genbank sequence_feature 28854 28932 . + . ID=id-AFQR01000038.1:28854..28932;Note=multi-dom%3B label: PRK14715;gbkey=misc_feature ##sequence-region AFQR01000037.1 1 19820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000037.1 Genbank region 1 19820 . + . ID=AFQR01000037.1:1..19820;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 277 613 . - . ID=id-AFQR01000037.1:277..613;Dbxref=InterPro:IPR019276,PFAM:PF10065;Note=duf2303~protein of unknown function duf2303;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 277 610 . - . ID=id-AFQR01000037.1:277..610;Note=superfamily%3B label: DUF2303 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 298 445 . + . ID=id-AFQR01000037.1:298..445;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 712 1056 . - . ID=gene-GGE_1933;Name=GGE_1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1933 GCA_000222085.2|AFQR01000037.1 Genbank CDS 712 1056 . - 0 ID=cds-EGT79365.1;Parent=gene-GGE_1933;Dbxref=GeneID:254361479,NCBI_GP:EGT79365.1;Name=EGT79365.1;Note=ZP_04977618;gbkey=CDS;locus_tag=GGE_1933;product=putative bacteriophage protein;protein_id=EGT79365.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 1351 1560 . - . ID=gene-GGE_1934;Name=GGE_1934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1934 GCA_000222085.2|AFQR01000037.1 Genbank CDS 1351 1560 . - 0 ID=cds-EGT79366.1;Parent=gene-GGE_1934;Dbxref=GeneID:260583037,NCBI_GP:EGT79366.1;Name=EGT79366.1;Note=ZP_05850819%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_1934;product=hypothetical protein;protein_id=EGT79366.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 1574 1750 . + . ID=gene-GGE_1935;Name=GGE_1935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1935 GCA_000222085.2|AFQR01000037.1 Genbank CDS 1574 1750 . + 0 ID=cds-EGT79367.1;Parent=gene-GGE_1935;Dbxref=GeneID:260583036,InterPro:IPR010879,PFAM:PF07411,NCBI_GP:EGT79367.1;Name=EGT79367.1;Note=ZP_05850818%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_1935;product=hypothetical protein;protein_id=EGT79367.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 1574 1715 . + . ID=id-GGE_1935;Dbxref=InterPro:IPR010879;Note=Gene3D:3.30.160.160~domain of unknown function duf1508;gbkey=misc_feature;locus_tag=GGE_1935 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 1598 1724 . + . ID=id-GGE_1935-2;Note=superfamily%3B label: DUF1508 superfamily;gbkey=misc_feature;locus_tag=GGE_1935 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 1598 1718 . + . ID=id-GGE_1935-3;Dbxref=InterPro:IPR010879,PFAM:PF07411;Note=duf1508~domain of unknown function duf1508;gbkey=misc_feature;locus_tag=GGE_1935 GCA_000222085.2|AFQR01000037.1 Genbank gene 1937 3784 . - . ID=gene-GGE_1936;Name=GGE_1936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1936 GCA_000222085.2|AFQR01000037.1 Genbank CDS 1937 3784 . - 0 ID=cds-EGT79368.1;Parent=gene-GGE_1936;Dbxref=GeneID:145632023,InterPro:IPR007406,NCBI_GP:EGT79368.1;Name=EGT79368.1;Note=ZP_01787770;Ontology_term=GO:0030261,GO:0007059,GO:0009295,GO:0005524,GO:0003677;gbkey=CDS;go_component=nucleoid|0009295||;go_function=ATP binding|0005524||,DNA binding|0003677||;go_process=chromosome condensation|0030261||,chromosome segregation|0007059||;locus_tag=GGE_1936;product=putative ABC oligo/dipeptide transport%2C ATP-binding protein;protein_id=EGT79368.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 2129 2816 . - . ID=id-GGE_1936;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1936 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 2135 2915 . - . ID=id-GGE_1936-2;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1936 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 1973 2012 . + . ID=id-AFQR01000037.1:1973..2012;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 1985 2075 . + . ID=id-AFQR01000037.1:1985..2075;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 2270 2684 . + . ID=id-AFQR01000037.1:2270..2684;Dbxref=InterPro:IPR007406;Note=Gene3D:3.40.1140.10~prokaryotic chromosome segregation/condensation protein mukb;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 3788 4441 . - . ID=gene-GGE_1937;Name=GGE_1937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank CDS 3788 4441 . - 0 ID=cds-EGT79369.1;Parent=gene-GGE_1937;Dbxref=GeneID:145632024,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,PFAM:PF01381,NCBI_GP:EGT79369.1;Name=EGT79369.1;Note=ZP_01787771;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1937;product=putative phage repressor;protein_id=EGT79369.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3788 4019 . - . ID=id-GGE_1937;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3794 3989 . - . ID=id-GGE_1937-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3809 3965 . - . ID=id-GGE_1937-3;Note=specific~superfamily%3B label: HTH_XRE;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3812 4391 . - . ID=id-GGE_1937-4;Note=multi-dom%3B label: LexA;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3818 3956 . - . ID=id-GGE_1937-5;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3~ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4031 4187 . - . ID=id-GGE_1937-6;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4037 4169 . - . ID=id-GGE_1937-7;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature;locus_tag=GGE_1937 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 3923 4166 . + . ID=id-AFQR01000037.1:3923..4166;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4049 4154 . + . ID=id-AFQR01000037.1:4049..4154;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 4542 4736 . + . ID=gene-GGE_1938;Name=GGE_1938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1938 GCA_000222085.2|AFQR01000037.1 Genbank CDS 4542 4736 . + 0 ID=cds-EGT79370.1;Parent=gene-GGE_1938;Dbxref=GeneID:145632025,InterPro:IPR010982,NCBI_GP:EGT79370.1;Name=EGT79370.1;Note=ZP_01787772;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1938;product=putative lambda repressor-like%2C DNA-binding protein;protein_id=EGT79370.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4542 4725 . + . ID=id-GGE_1938;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1938 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4542 4716 . + . ID=id-GGE_1938-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1938 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4542 4713 . + . ID=id-GGE_1938-3;Note=superfamily%3B label: PRK09744 superfamily;gbkey=misc_feature;locus_tag=GGE_1938 GCA_000222085.2|AFQR01000037.1 Genbank gene 4780 5223 . + . ID=gene-GGE_1939;Name=GGE_1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1939 GCA_000222085.2|AFQR01000037.1 Genbank CDS 4780 5223 . + 0 ID=cds-EGT79371.1;Parent=gene-GGE_1939;Dbxref=GeneID:152978885,NCBI_GP:EGT79371.1;Name=EGT79371.1;Note=YP_001344514~Asuc_1217;gbkey=CDS;locus_tag=GGE_1939;product=Hypothetical protein;protein_id=EGT79371.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 4831 4840 . + . ID=id-GGE_1939;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1939 GCA_000222085.2|AFQR01000037.1 Genbank gene 5264 5974 . + . ID=gene-GGE_1940;Name=GGE_1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1940 GCA_000222085.2|AFQR01000037.1 Genbank CDS 5264 5974 . + 0 ID=cds-EGT79372.1;Parent=gene-GGE_1940;Dbxref=GeneID:145641566,InterPro:IPR005039,InterPro:IPR017880,InterPro:IPR018004,PFAM:PF03374,PFAM:PF04383,NCBI_GP:EGT79372.1;Name=EGT79372.1;Note=ZP_01797143;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1940;product=putative kilA-like protein;protein_id=EGT79372.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5264 5576 . + . ID=id-GGE_1940;Dbxref=InterPro:IPR017880;Note=ProfileScan:PS51301~kila_n~kila;gbkey=misc_feature;locus_tag=GGE_1940 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5291 5552 . + . ID=id-GGE_1940-2;Dbxref=InterPro:IPR018004,PFAM:PF04383;Note=kila-n~kila/apses-type hth%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1940 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5300 5537 . + . ID=id-GGE_1940-3;Note=superfamily%3B label: KilA-N superfamily;gbkey=misc_feature;locus_tag=GGE_1940 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5294 5636 . - . ID=id-AFQR01000037.1:5294..5636;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5558 5681 . - . ID=id-AFQR01000037.1:5558..5681;Note=superfamily%3B label: ANT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 5573 5657 . - . ID=id-AFQR01000037.1:5573..5657;Dbxref=InterPro:IPR005039,PFAM:PF03374;Note=ant~phage antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 5971 6687 . + . ID=gene-GGE_1941;Name=GGE_1941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1941 GCA_000222085.2|AFQR01000037.1 Genbank CDS 5971 6687 . + 0 ID=cds-EGT79373.1;Parent=gene-GGE_1941;Dbxref=GeneID:68250060,NCBI_GP:EGT79373.1;Name=EGT79373.1;Note=YP_249172;gbkey=CDS;locus_tag=GGE_1941;product=Hypothetical protein;protein_id=EGT79373.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 6672 7307 . + . ID=gene-GGE_1942;Name=GGE_1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1942 GCA_000222085.2|AFQR01000037.1 Genbank CDS 6672 7307 . + 0 ID=cds-EGT79374.1;Parent=gene-GGE_1942;Dbxref=GeneID:145629803,InterPro:IPR009731,PFAM:PF06992,NCBI_GP:EGT79374.1;Name=EGT79374.1;Note=ZP_01785597;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA-dependent DNA replication initiation|0006270||;locus_tag=GGE_1942;product=putative replication P;protein_id=EGT79374.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 6717 7092 . + . ID=id-GGE_1942;Note=superfamily%3B label: Phage_lambda_P superfamily;gbkey=misc_feature;locus_tag=GGE_1942 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 6720 7089 . + . ID=id-GGE_1942-2;Dbxref=InterPro:IPR009731,PFAM:PF06992;Note=phage_lambda_p~replication p;gbkey=misc_feature;locus_tag=GGE_1942 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7175 7184 . + . ID=id-GGE_1942-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1942 GCA_000222085.2|AFQR01000037.1 Genbank gene 7304 7528 . + . ID=gene-GGE_1943;Name=GGE_1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1943 GCA_000222085.2|AFQR01000037.1 Genbank CDS 7304 7528 . + 0 ID=cds-EGT79375.1;Parent=gene-GGE_1943;Dbxref=GeneID:229844485,NCBI_GP:EGT79375.1;Name=EGT79375.1;Note=ZP_04464625~CGSHi6P18H1_09225;gbkey=CDS;locus_tag=GGE_1943;product=Hypothetical protein;protein_id=EGT79375.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 7525 8448 . + . ID=gene-GGE_1944;Name=GGE_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank CDS 7525 8448 . + 0 ID=cds-EGT79376.1;Parent=gene-GGE_1944;Dbxref=GeneID:229844486,InterPro:IPR002052,InterPro:IPR003356,PFAM:PF02384,NCBI_GP:EGT79376.1;Name=EGT79376.1;Note=ZP_04464626;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676;gbkey=CDS;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_1944;product=putative type I restriction enzyme-like protein;protein_id=EGT79376.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7534 8119 . + . ID=id-GGE_1944;Note=multi-dom%3B label: N6_Mtase;gbkey=misc_feature;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7555 8203 . + . ID=id-GGE_1944-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7639 8077 . + . ID=id-GGE_1944-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7651 7720 . + . ID=id-GGE_1944-4;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7804 7867 . + . ID=id-GGE_1944-5;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature;locus_tag=GGE_1944 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7546 7825 . - . ID=id-AFQR01000037.1:7546..7825;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 7564 7849 . - . ID=id-AFQR01000037.1:7564..7849;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 8502 8580 . + . ID=id-AFQR01000037.1:8502..8580;Note=multi-dom%3B label: PRK14715;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 8691 9230 . + . ID=gene-GGE_1945;Name=GGE_1945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1945 GCA_000222085.2|AFQR01000037.1 Genbank CDS 8691 9230 . + 0 ID=cds-EGT79377.1;Parent=gene-GGE_1945;Dbxref=GeneID:68249867,InterPro:IPR009797,PFAM:PF07105,NCBI_GP:EGT79377.1;Name=EGT79377.1;Note=YP_248979;gbkey=CDS;locus_tag=GGE_1945;product=Hypothetical protein;protein_id=EGT79377.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 8787 9129 . + . ID=id-GGE_1945;Note=superfamily%3B label: DUF1367 superfamily;gbkey=misc_feature;locus_tag=GGE_1945 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 8787 8868 . + . ID=id-GGE_1945-2;Dbxref=InterPro:IPR009797,PFAM:PF07105;Note=duf1367~protein of unknown function duf1367;gbkey=misc_feature;locus_tag=GGE_1945 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 8730 8826 . - . ID=id-AFQR01000037.1:8730..8826;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 8883 8997 . - . ID=id-AFQR01000037.1:8883..8997;Dbxref=InterPro:IPR009797,PFAM:PF07105;Note=duf1367~protein of unknown function duf1367;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 9231 9659 . - . ID=gene-GGE_1946;Name=GGE_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1946 GCA_000222085.2|AFQR01000037.1 Genbank CDS 9231 9659 . - 0 ID=cds-EGT79378.1;Parent=gene-GGE_1946;Dbxref=GeneID:68249866,InterPro:IPR005357,PFAM:PF03681,NCBI_GP:EGT79378.1;Name=EGT79378.1;Note=YP_248978;gbkey=CDS;locus_tag=GGE_1946;product=putative Hypothetical protein family UPF0150;protein_id=EGT79378.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 9240 9390 . - . ID=id-GGE_1946;Note=superfamily%3B label: UPF0150 superfamily;gbkey=misc_feature;locus_tag=GGE_1946 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 9240 9387 . - . ID=id-GGE_1946-2;Dbxref=InterPro:IPR005357,PFAM:PF03681;Note=upf0150~uncharacterised protein family upf0150;gbkey=misc_feature;locus_tag=GGE_1946 GCA_000222085.2|AFQR01000037.1 Genbank gene 9690 9875 . - . ID=gene-GGE_1947;Name=GGE_1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1947 GCA_000222085.2|AFQR01000037.1 Genbank CDS 9690 9875 . - 0 ID=cds-EGT79379.1;Parent=gene-GGE_1947;Dbxref=GeneID:68249865,InterPro:IPR012933,InterPro:IPR015146,PFAM:PF07927,NCBI_GP:EGT79379.1;Name=EGT79379.1;Note=YP_248977;gbkey=CDS;locus_tag=GGE_1947;product=putative ribonucleotide reductase%2C stirrup;protein_id=EGT79379.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 9690 9870 . - . ID=id-GGE_1947;Dbxref=InterPro:IPR015146;Note=Gene3D:3.30.920.30~superfamily:SSF54786~ycfa/nrd intein domain~ribonucleotide reductase%2C stirrup;gbkey=misc_feature;locus_tag=GGE_1947 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 9699 9864 . - . ID=id-GGE_1947-2;Dbxref=InterPro:IPR012933,PFAM:PF07927;Note=superfamily~ycfa~uncharacterised protein family upf0395%3B label: YcfA superfamily;gbkey=misc_feature;locus_tag=GGE_1947 GCA_000222085.2|AFQR01000037.1 Genbank gene 9942 10031 . + . ID=gene-GGE_1948;Name=GGE_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1948 GCA_000222085.2|AFQR01000037.1 Genbank CDS 9942 10031 . + 0 ID=cds-EGT79380.1;Parent=gene-GGE_1948;Dbxref=GeneID:145642418,NCBI_GP:EGT79380.1;Name=EGT79380.1;Note=ZP_01797974~CGSHiR3021_00030;gbkey=CDS;locus_tag=GGE_1948;product=Hypothetical protein;protein_id=EGT79380.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 9981 9990 . + . ID=id-GGE_1948;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1948 GCA_000222085.2|AFQR01000037.1 Genbank gene 10031 10618 . + . ID=gene-GGE_1949;Name=GGE_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1949 GCA_000222085.2|AFQR01000037.1 Genbank CDS 10031 10618 . + 0 ID=cds-EGT79381.1;Parent=gene-GGE_1949;Dbxref=GeneID:145629799,InterPro:IPR008713,PFAM:PF05766,NCBI_GP:EGT79381.1;Name=EGT79381.1;Note=ZP_01785593;gbkey=CDS;locus_tag=GGE_1949;product=putative bacteriophage lambda NinG;protein_id=EGT79381.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 10037 10607 . + . ID=id-GGE_1949;Dbxref=InterPro:IPR008713,PFAM:PF05766;Note=superfamily~ning~bacteriophage lambda ning%3B label: NinG superfamily;gbkey=misc_feature;locus_tag=GGE_1949 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 10097 10211 . - . ID=id-AFQR01000037.1:10097..10211;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 10620 10985 . + . ID=gene-GGE_1950;Name=GGE_1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1950 GCA_000222085.2|AFQR01000037.1 Genbank CDS 10620 10985 . + 0 ID=cds-EGT79382.1;Parent=gene-GGE_1950;Dbxref=GeneID:319775713,InterPro:IPR013249,InterPro:IPR013324,PFAM:PF08281,NCBI_GP:EGT79382.1;Name=EGT79382.1;Note=YP_004138201;Ontology_term=GO:0006355,GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||,sigma factor activity|0016987||;go_process=regulation of transcription DNA-dependent|0006355||,transcription initiation DNA-dependent|0006352||;locus_tag=GGE_1950;product=putative rNA polymerase sigma factor 70%2C region 4 type 2;protein_id=EGT79382.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 10638 10917 . + . ID=id-GGE_1950;Note=superfamily%3B label: Phage_antitermQ superfamily;gbkey=misc_feature;locus_tag=GGE_1950 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 10767 10803 . + . ID=id-GGE_1950-2;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma3 and sigma4 domains of rna polymerase sigma factors~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature;locus_tag=GGE_1950 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 10725 10830 . - . ID=id-AFQR01000037.1:10725..10830;Dbxref=InterPro:IPR013249,PFAM:PF08281;Note=sigma70_r4_2~rna polymerase sigma factor 70%2C region 4 type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 11048 11908 . + . ID=gene-GGE_1951;Name=GGE_1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1951 GCA_000222085.2|AFQR01000037.1 Genbank CDS 11048 11908 . + 0 ID=cds-EGT79383.1;Parent=gene-GGE_1951;Dbxref=GeneID:68249862,NCBI_GP:EGT79383.1;Name=EGT79383.1;Note=YP_248974;gbkey=CDS;locus_tag=GGE_1951;product=Hypothetical protein;protein_id=EGT79383.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 11096 11786 . - . ID=id-AFQR01000037.1:11096..11786;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 11919 13067 . + . ID=gene-GGE_1952;Name=GGE_1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1952 GCA_000222085.2|AFQR01000037.1 Genbank CDS 11919 13067 . + 0 ID=cds-EGT79384.1;Parent=gene-GGE_1952;Dbxref=GeneID:68249861,InterPro:IPR007409,PFAM:PF04313,NCBI_GP:EGT79384.1;Name=EGT79384.1;Note=YP_248973;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||,endonuclease activity|0004519||;go_process=DNA modification|0006304||;locus_tag=GGE_1952;product=putative restriction endonuclease-like protein;protein_id=EGT79384.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 11937 12918 . + . ID=id-GGE_1952;Note=multi-dom%3B label: COG4748;gbkey=misc_feature;locus_tag=GGE_1952 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 11994 12024 . + . ID=id-GGE_1952-2;Dbxref=InterPro:IPR007409,PFAM:PF04313;Note=hsdr_n~restriction endonuclease%2C type i%2C hsdr;gbkey=misc_feature;locus_tag=GGE_1952 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 12114 12120 . + . ID=id-GGE_1952-3;Note=superfamily%3B label: HSDR_N superfamily;gbkey=misc_feature;locus_tag=GGE_1952 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 12114 12117 . + . ID=id-GGE_1952-4;Dbxref=InterPro:IPR007409,PFAM:PF04313;Note=hsdr_n~restriction endonuclease%2C type i%2C hsdr;gbkey=misc_feature;locus_tag=GGE_1952 GCA_000222085.2|AFQR01000037.1 Genbank gene 13217 13402 . + . ID=gene-GGE_1953;Name=GGE_1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1953 GCA_000222085.2|AFQR01000037.1 Genbank CDS 13217 13402 . + 0 ID=cds-EGT79385.1;Parent=gene-GGE_1953;Dbxref=GeneID:68249860,NCBI_GP:EGT79385.1;Name=EGT79385.1;Note=YP_248972;gbkey=CDS;locus_tag=GGE_1953;product=Hypothetical protein;protein_id=EGT79385.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 13662 13671 . - . ID=id-AFQR01000037.1:13662..13671;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 13788 14096 . + . ID=gene-GGE_1954;Name=GGE_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1954 GCA_000222085.2|AFQR01000037.1 Genbank CDS 13788 14096 . + 0 ID=cds-EGT79386.1;Parent=gene-GGE_1954;Dbxref=GeneID:68249859,NCBI_GP:EGT79386.1;Name=EGT79386.1;Note=YP_248971;gbkey=CDS;locus_tag=GGE_1954;product=Hypothetical protein;protein_id=EGT79386.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 14205 14465 . + . ID=gene-GGE_1955;Name=GGE_1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1955 GCA_000222085.2|AFQR01000037.1 Genbank CDS 14205 14465 . + 0 ID=cds-EGT79387.1;Parent=gene-GGE_1955;Dbxref=GeneID:145636009,NCBI_GP:EGT79387.1;Name=EGT79387.1;Note=ZP_01791689~CGSHiAA_00635;gbkey=CDS;locus_tag=GGE_1955;product=Hypothetical protein;protein_id=EGT79387.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14256 14262 . - . ID=id-AFQR01000037.1:14256..14262;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14259 14322 . - . ID=id-AFQR01000037.1:14259..14322;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 14455 15480 . + . ID=gene-GGE_1956;Name=GGE_1956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1956 GCA_000222085.2|AFQR01000037.1 Genbank CDS 14455 15480 . + 0 ID=cds-EGT79388.1;Parent=gene-GGE_1956;Dbxref=GeneID:319776191,InterPro:IPR018876,PFAM:PF10548,NCBI_GP:EGT79388.1;Name=EGT79388.1;Note=YP_004138679;gbkey=CDS;locus_tag=GGE_1956;product=putative endonuclease-like protein;protein_id=EGT79388.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14509 15172 . - . ID=id-AFQR01000037.1:14509..15172;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14632 15226 . - . ID=id-AFQR01000037.1:14632..15226;Note=superfamily%3B label: P22_AR_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14644 14869 . - . ID=id-AFQR01000037.1:14644..14869;Note=superfamily:SSF54060~his-me finger endonucleases;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 14674 15184 . - . ID=id-AFQR01000037.1:14674..15184;Dbxref=InterPro:IPR018876,PFAM:PF10548;Note=p22_ar_c~phage p22%2C antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 15531 15875 . + . ID=gene-GGE_1957;Name=GGE_1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1957 GCA_000222085.2|AFQR01000037.1 Genbank CDS 15531 15875 . + 0 ID=cds-EGT79389.1;Parent=gene-GGE_1957;Dbxref=GeneID:319776190,NCBI_GP:EGT79389.1;Name=EGT79389.1;Note=YP_004138678~HICON_15430;gbkey=CDS;locus_tag=GGE_1957;product=Hypothetical protein;protein_id=EGT79389.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 15570 15630 . - . ID=id-AFQR01000037.1:15570..15630;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 15600 15618 . - . ID=id-AFQR01000037.1:15600..15618;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 15872 16168 . + . ID=gene-GGE_1958;Name=GGE_1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1958 GCA_000222085.2|AFQR01000037.1 Genbank CDS 15872 16168 . + 0 ID=cds-EGT79390.1;Parent=gene-GGE_1958;Dbxref=GeneID:145640102,NCBI_GP:EGT79390.1;Name=EGT79390.1;Note=ZP_01795694~CGSHiII_00070;gbkey=CDS;locus_tag=GGE_1958;product=Hypothetical protein;protein_id=EGT79390.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 16192 17127 . + . ID=gene-GGE_1959;Name=GGE_1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1959 GCA_000222085.2|AFQR01000037.1 Genbank CDS 16192 17127 . + 0 ID=cds-EGT79391.1;Parent=gene-GGE_1959;Dbxref=GeneID:260583138,NCBI_GP:EGT79391.1;Name=EGT79391.1;Note=ZP_05850919;gbkey=CDS;locus_tag=GGE_1959;product=Hypothetical protein;protein_id=EGT79391.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 16536 16545 . + . ID=id-GGE_1959;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1959 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 16945 16954 . + . ID=id-GGE_1959-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1959 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 16234 16627 . - . ID=id-AFQR01000037.1:16234..16627;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 16315 16822 . - . ID=id-AFQR01000037.1:16315..16822;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 16378 16816 . - . ID=id-AFQR01000037.1:16378..16816;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 17129 17911 . + . ID=gene-GGE_1960;Name=GGE_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1960 GCA_000222085.2|AFQR01000037.1 Genbank CDS 17129 17911 . + 0 ID=cds-EGT79392.1;Parent=gene-GGE_1960;Dbxref=GeneID:260583139,InterPro:IPR010183,InterPro:IPR018330,PFAM:PF03837,TIGRFAM:TIGR01913,NCBI_GP:EGT79392.1;Name=EGT79392.1;Note=ZP_05850920;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA metabolic process|0006259||;locus_tag=GGE_1960;product=phage recombination protein Bet;protein_id=EGT79392.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17153 17606 . + . ID=id-GGE_1960;Dbxref=InterPro:IPR010183,TIGRFAM:TIGR01913;Note=bet_lambda: phage recombination protein be~phage recombination protein bet;gbkey=misc_feature;locus_tag=GGE_1960 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17186 17573 . + . ID=id-GGE_1960-2;Note=superfamily%3B label: RecT superfamily;gbkey=misc_feature;locus_tag=GGE_1960 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17237 17543 . + . ID=id-GGE_1960-3;Dbxref=InterPro:IPR018330,PFAM:PF03837;Note=rect~dna single-strand annealing protein rect-like;gbkey=misc_feature;locus_tag=GGE_1960 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17183 17696 . - . ID=id-AFQR01000037.1:17183..17696;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17216 17816 . - . ID=id-AFQR01000037.1:17216..17816;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17257 17266 . - . ID=id-AFQR01000037.1:17257..17266;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000037.1 Genbank gene 17905 18522 . + . ID=gene-GGE_1961;Name=GGE_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1961 GCA_000222085.2|AFQR01000037.1 Genbank CDS 17905 18522 . + 0 ID=cds-EGT79393.1;Parent=gene-GGE_1961;Dbxref=GeneID:260583140,InterPro:IPR011335,InterPro:IPR011604,InterPro:IPR019080,PFAM:PF09588,NCBI_GP:EGT79393.1;Name=EGT79393.1;Note=ZP_05850921;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||,nuclease activity|0004518||;locus_tag=GGE_1961;product=exonuclease;protein_id=EGT79393.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17917 18499 . + . ID=id-GGE_1961;Dbxref=InterPro:IPR011604;Note=Gene3D:3.90.320.10~exonuclease%2C phage-type/recb;gbkey=misc_feature;locus_tag=GGE_1961 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17920 18493 . + . ID=id-GGE_1961-2;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;locus_tag=GGE_1961 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17953 18328 . + . ID=id-GGE_1961-3;Dbxref=InterPro:IPR019080,PFAM:PF09588;Note=yqaj~yqaj viral recombinase family;gbkey=misc_feature;locus_tag=GGE_1961 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 17953 18319 . + . ID=id-GGE_1961-4;Note=superfamily%3B label: YqaJ superfamily;gbkey=misc_feature;locus_tag=GGE_1961 GCA_000222085.2|AFQR01000037.1 Genbank gene 18525 18668 . + . ID=gene-GGE_1962;Name=GGE_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1962 GCA_000222085.2|AFQR01000037.1 Genbank CDS 18525 18668 . + 0 ID=cds-EGT79394.1;Parent=gene-GGE_1962;Dbxref=GeneID:145641708,NCBI_GP:EGT79394.1;Name=EGT79394.1;Note=ZP_01797284~CGSHiR3021_02114;gbkey=CDS;locus_tag=GGE_1962;product=Hypothetical protein;protein_id=EGT79394.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank gene 18677 19117 . + . ID=gene-GGE_1963;Name=GGE_1963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank CDS 18677 19117 . + 0 ID=cds-EGT79395.1;Parent=gene-GGE_1963;Dbxref=GeneID:260583141,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,TIGRFAM:TIGR00621,NCBI_GP:EGT79395.1;Name=EGT79395.1;Note=ZP_05850922;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||;go_process=DNA replication|0006260||;locus_tag=GGE_1963;product=single-strand binding protein;protein_id=EGT79395.1;transl_table=11 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18677 19115 . + . ID=id-GGE_1963;Dbxref=InterPro:IPR011344,InterPro:IPR012340;Note=HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding~Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18683 19112 . + . ID=id-GGE_1963-2;Dbxref=InterPro:IPR011344,TIGRFAM:TIGR00621;Note=ssb: single-strand binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18686 19109 . + . ID=id-GGE_1963-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18689 18995 . + . ID=id-GGE_1963-4;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18689 18992 . + . ID=id-GGE_1963-5;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18698 18983 . + . ID=id-GGE_1963-6;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;locus_tag=GGE_1963 GCA_000222085.2|AFQR01000037.1 Genbank sequence_feature 18734 19013 . - . ID=id-AFQR01000037.1:18734..19013;Note=seg;gbkey=misc_feature ##sequence-region AFQR01000036.1 1 107795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000036.1 Genbank region 1 107795 . + . ID=AFQR01000036.1:1..107795;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000036.1 Genbank gene 498 1100 . - . ID=gene-GGE_1830;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank CDS 498 1100 . - 0 ID=cds-EGT79647.1;Parent=gene-GGE_1830;Dbxref=GeneID:1171647,InterPro:IPR005126,InterPro:IPR011031,InterPro:IPR011885,PFAM:PF03264,TIGRFAM:TIGR02161,NCBI_GP:EGT79647.1;Name=EGT79647.1;Ontology_term=GO:0016021,GO:0020037;gbkey=CDS;gene=napC;go_component=integral to membrane|0016021||;go_function=heme binding|0020037||;locus_tag=GGE_1830;product=Cytochrome c-type protein NapC;protein_id=EGT79647.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 522 1065 . - . ID=id-GGE_1830;Note=multi-dom%3B label: TorC;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 522 1047 . - . ID=id-GGE_1830-2;Dbxref=InterPro:IPR011885,TIGRFAM:TIGR02161;Note=superfamily~napc_nirt: periplasmic nitrate (or nitrite)~periplasmic nitrate reductase c-type cytochrome%2C napc/nirt%3B label: PRK10617 superfamily;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 540 1059 . - . ID=id-GGE_1830-3;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 558 1008 . - . ID=id-GGE_1830-4;Dbxref=InterPro:IPR005126,PFAM:PF03264;Note=cytochrom_nnt~napc/nirt cytochrome c;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 558 567 . - . ID=id-GGE_1830-5;Note=transmembrane_regions;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 579 966 . - . ID=id-GGE_1830-6;Note=Gene3D:1.10.780.10;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 648 903 . - . ID=id-GGE_1830-7;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature;gene=napC;locus_tag=GGE_1830 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 546 567 . + . ID=id-AFQR01000036.1:546..567;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 1115 1558 . - . ID=gene-GGE_1831;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=GGE_1831 GCA_000222085.2|AFQR01000036.1 Genbank CDS 1115 1558 . - 0 ID=cds-EGT79648.1;Parent=gene-GGE_1831;Dbxref=GeneID:1171646,InterPro:IPR005591,InterPro:IPR011031,PFAM:PF03892,NCBI_GP:EGT79648.1;Name=EGT79648.1;gbkey=CDS;gene=napB;locus_tag=GGE_1831;product=Diheme cytochrome c NapB;protein_id=EGT79648.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1115 1556 . - . ID=id-GGE_1831;Note=superfamily%3B label: NapB superfamily;gbkey=misc_feature;gene=napB;locus_tag=GGE_1831 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1190 1478 . - . ID=id-GGE_1831-2;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;gene=napB;locus_tag=GGE_1831 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1211 1448 . - . ID=id-GGE_1831-3;Dbxref=InterPro:IPR005591,PFAM:PF03892;Note=napb~nitrate reductase cytochrome c-type subunit (napb);gbkey=misc_feature;gene=napB;locus_tag=GGE_1831 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1295 1316 . - . ID=id-GGE_1831-4;Note=Gene3D:4.10.1020.10;gbkey=misc_feature;gene=napB;locus_tag=GGE_1831 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1280 1343 . + . ID=id-AFQR01000036.1:1280..1343;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1509 1518 . + . ID=id-AFQR01000036.1:1509..1518;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 1564 2427 . - . ID=gene-GGE_1832;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=GGE_1832 GCA_000222085.2|AFQR01000036.1 Genbank CDS 1564 2427 . - 0 ID=cds-EGT79649.1;Parent=gene-GGE_1832;Dbxref=GeneID:1171650,InterPro:IPR011886,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR02163,NCBI_GP:EGT79649.1;Name=EGT79649.1;Ontology_term=GO:0009055,GO:0005506,GO:0051536;gbkey=CDS;gene=napH;go_function=electron carrier activity|0009055||,iron ion binding|0005506||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1832;product=Ferredoxin-type protein napH;protein_id=EGT79649.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1615 2377 . - . ID=id-GGE_1832;Note=multi-dom%3B label: napH;gbkey=misc_feature;gene=napH;locus_tag=GGE_1832 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1636 2335 . - . ID=id-GGE_1832-2;Dbxref=InterPro:IPR011886,TIGRFAM:TIGR02163;Note=naph_: ferredoxin-type protein%2C naph/maun fa~ferredoxin-type protein%2C naph/maun family;gbkey=misc_feature;gene=napH;locus_tag=GGE_1832 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1831 2149 . - . ID=id-GGE_1832-3;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=napH;locus_tag=GGE_1832 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1600 2242 . + . ID=id-AFQR01000036.1:1600..2242;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1603 2104 . + . ID=id-AFQR01000036.1:1603..2104;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1618 1663 . + . ID=id-AFQR01000036.1:1618..1663;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1633 2071 . + . ID=id-AFQR01000036.1:1633..2071;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1633 1975 . + . ID=id-AFQR01000036.1:1633..1975;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1633 1822 . + . ID=id-AFQR01000036.1:1633..1822;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1654 2320 . + . ID=id-AFQR01000036.1:1654..2320;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1657 2215 . + . ID=id-AFQR01000036.1:1657..2215;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1672 2146 . + . ID=id-AFQR01000036.1:1672..2146;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1717 2254 . + . ID=id-AFQR01000036.1:1717..2254;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 1720 2236 . + . ID=id-AFQR01000036.1:1720..2236;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 2427 3266 . - . ID=gene-GGE_1833;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank CDS 2427 3266 . - 0 ID=cds-EGT79650.1;Parent=gene-GGE_1833;Dbxref=GeneID:1171649,InterPro:IPR004494,InterPro:IPR006311,InterPro:IPR012285,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR00397,TIGRFAM:TIGR01409,NCBI_GP:EGT79650.1;Name=EGT79650.1;Ontology_term=GO:0009055,GO:0051536,GO:0016491;gbkey=CDS;gene=napG;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;locus_tag=GGE_1833;product=Ferredoxin-type protein napG;protein_id=EGT79650.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2433 2463 . - . ID=id-GGE_1833;Note=seg;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2469 3183 . - . ID=id-GGE_1833-2;Note=multi-dom%3B label: napG;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2478 3081 . - . ID=id-GGE_1833-3;Dbxref=InterPro:IPR004494,TIGRFAM:TIGR00397;Note=maum_napg: maum/napg family ferredoxin~maum/napg ferredoxin-type protein;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2481 2526 . - . ID=id-GGE_1833-4;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2625 2853 . - . ID=id-GGE_1833-5;Note=HMMPanther:PTHR11938~family not named;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2643 2862 . - . ID=id-GGE_1833-6;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3253 3262 . - . ID=id-GGE_1833-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=napG;locus_tag=GGE_1833 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2463 2643 . + . ID=id-AFQR01000036.1:2463..2643;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2466 2520 . + . ID=id-AFQR01000036.1:2466..2520;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2517 2616 . + . ID=id-AFQR01000036.1:2517..2616;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2523 2991 . + . ID=id-AFQR01000036.1:2523..2991;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2526 2727 . + . ID=id-AFQR01000036.1:2526..2727;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2535 2790 . + . ID=id-AFQR01000036.1:2535..2790;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2538 2850 . + . ID=id-AFQR01000036.1:2538..2850;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2586 2898 . + . ID=id-AFQR01000036.1:2586..2898;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2607 2610 . + . ID=id-AFQR01000036.1:2607..2610;Dbxref=InterPro:IPR012285;Note=Gene3D:1.10.1060.10~fumarate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 2700 2814 . + . ID=id-AFQR01000036.1:2700..2814;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3293 3302 . + . ID=id-AFQR01000036.1:3293..3302;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 3321 5804 . - . ID=gene-GGE_1834;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank CDS 3321 5804 . - 0 ID=cds-EGT79651.1;Parent=gene-GGE_1834;Dbxref=GeneID:167012492,InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR010051,PFAM:PF00384,PFAM:PF01568,PFAM:PF04879,TIGRFAM:TIGR01409,TIGRFAM:TIGR01706,NCBI_GP:EGT79651.1;Name=EGT79651.1;Ontology_term=GO:0042128,GO:0055114,GO:0042597,GO:0051539,GO:0005488,GO:0009055,GO:0030151,GO:0008940,GO:0016491;gbkey=CDS;gene=napA;go_component=periplasmic space|0042597||;go_function=4 iron 4 sulfur cluster binding|0051539||,binding|0005488||,electron carrier activity|0009055||,molybdenum ion binding|0030151||,nitrate reductase activity|0008940||,oxidoreductase activity|0016491||;go_process=nitrate assimilation|0042128||,oxidation-reduction process|0055114||;locus_tag=GGE_1834;product=Periplasmic nitrate reductase;protein_id=EGT79651.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3321 5799 . - . ID=id-GGE_1834;Dbxref=InterPro:IPR010051;Note=multi-dom~HAMAP:MF_01630~nitrate_reduct~nitrate reductase%2C large subunit%2C periplasmic%3B label: PRK13532;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3321 3420 . - . ID=id-GGE_1834-2;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3327 5796 . - . ID=id-GGE_1834-3;Dbxref=InterPro:IPR010051,TIGRFAM:TIGR01706;Note=napa: periplasmic nitrate reductase%2C l~nitrate reductase%2C large subunit%2C periplasmic;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3330 3414 . - . ID=id-GGE_1834-4;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3405 5337 . - . ID=id-GGE_1834-5;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3414 5697 . - . ID=id-GGE_1834-6;Note=HMMPanther:PTHR11615:SF42~subfamily not named~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3426 3468 . - . ID=id-GGE_1834-7;Note=Gene3D:2.20.25.90;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3432 3483 . - . ID=id-GGE_1834-8;Dbxref=InterPro:IPR006963,PFAM:PF04879;Note=molybdop_fe4s4~molybdopterin oxidoreductase%2C fe4s4 domain;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3444 5307 . - . ID=id-GGE_1834-9;Note=specific~superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3603 4737 . - . ID=id-GGE_1834-10;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;gene=napA;locus_tag=GGE_1834 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3354 3354 . + . ID=id-AFQR01000036.1:3354..3354;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3375 3447 . + . ID=id-AFQR01000036.1:3375..3447;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00551~molybdopterin_prok_1~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3540 4290 . + . ID=id-AFQR01000036.1:3540..4290;Note=Gene3D:3.40.228.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3648 5457 . + . ID=id-AFQR01000036.1:3648..5457;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3675 5448 . + . ID=id-AFQR01000036.1:3675..5448;Dbxref=InterPro:IPR009010;Note=specific~superfamily~Gene3D:2.40.40.20~aspartate decarboxylase-like fold%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3678 4686 . + . ID=id-AFQR01000036.1:3678..4686;Note=Gene3D:3.40.50.740;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 3783 5340 . + . ID=id-AFQR01000036.1:3783..5340;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 5959 6240 . - . ID=gene-GGE_1835;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=GGE_1835 GCA_000222085.2|AFQR01000036.1 Genbank CDS 5959 6240 . - 0 ID=cds-EGT79652.1;Parent=gene-GGE_1835;Dbxref=InterPro:IPR005623,PFAM:PF03927,NCBI_GP:EGT79652.1;Name=EGT79652.1;gbkey=CDS;gene=napD;locus_tag=GGE_1835;product=Protein napD;protein_id=EGT79652.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 5998 6196 . - . ID=id-GGE_1835;Dbxref=InterPro:IPR005623,PFAM:PF03927;Note=napd~chaperone napd%2C nitrate reductase assembly;gbkey=misc_feature;gene=napD;locus_tag=GGE_1835 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6001 6193 . - . ID=id-GGE_1835-2;Note=superfamily%3B label: NapD superfamily;gbkey=misc_feature;gene=napD;locus_tag=GGE_1835 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6134 6143 . + . ID=id-AFQR01000036.1:6134..6143;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 6233 6763 . - . ID=gene-GGE_1836;Name=GGE_1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1836 GCA_000222085.2|AFQR01000036.1 Genbank CDS 6233 6763 . - 0 ID=cds-EGT79653.1;Parent=gene-GGE_1836;Dbxref=GeneID:145628696,InterPro:IPR001450,InterPro:IPR004496,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00037,TIGRFAM:TIGR00402,NCBI_GP:EGT79653.1;Name=EGT79653.1;Note=ZP_01784496;Ontology_term=GO:0009055,GO:0005506,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron ion binding|0005506||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1836;product=ferredoxin-type protein NapF;protein_id=EGT79653.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6248 6737 . - . ID=id-GGE_1836;Note=multi-dom%3B label: PRK10194;gbkey=misc_feature;locus_tag=GGE_1836 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6257 6719 . - . ID=id-GGE_1836-2;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_1836 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6257 6716 . - . ID=id-GGE_1836-3;Dbxref=InterPro:IPR004496,TIGRFAM:TIGR00402;Note=napf: ferredoxin-type protein napf~ferredoxin-type protein napf;gbkey=misc_feature;locus_tag=GGE_1836 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6269 6689 . + . ID=id-AFQR01000036.1:6269..6689;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6269 6377 . + . ID=id-AFQR01000036.1:6269..6377;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6293 6590 . + . ID=id-AFQR01000036.1:6293..6590;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6302 6671 . + . ID=id-AFQR01000036.1:6302..6671;Dbxref=InterPro:IPR001450,PFAM:PF00037;Note=fer4~4fe-4s binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6323 6662 . + . ID=id-AFQR01000036.1:6323..6662;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6323 6446 . + . ID=id-AFQR01000036.1:6323..6446;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6323 6350 . + . ID=id-AFQR01000036.1:6323..6350;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6347 6368 . + . ID=id-AFQR01000036.1:6347..6368;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6368 6617 . + . ID=id-AFQR01000036.1:6368..6617;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6368 6482 . + . ID=id-AFQR01000036.1:6368..6482;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6389 6590 . + . ID=id-AFQR01000036.1:6389..6590;Note=HMMPanther:PTHR10849:SF4~nadh dehydrogenase [ubiquinone] iron-sulfur protein 8%2C mitochondrial~HMMPanther:PTHR10849~nadh dehydrogenase [ubiquinone] iron-sulfur protein 8%2C mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6903 6912 . + . ID=id-AFQR01000036.1:6903..6912;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 6978 7322 . - . ID=gene-GGE_1837;Name=GGE_1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1837 GCA_000222085.2|AFQR01000036.1 Genbank CDS 6978 7322 . - 0 ID=cds-EGT79654.1;Parent=gene-GGE_1837;Dbxref=GeneID:1176098,InterPro:IPR007416,PFAM:PF04320,NCBI_GP:EGT79654.1;Name=EGT79654.1;Note=HI_0341;gbkey=CDS;locus_tag=GGE_1837;product=hypothetical protein;protein_id=EGT79654.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6978 7302 . - . ID=id-GGE_1837;Note=superfamily%3B label: DUF469 superfamily;gbkey=misc_feature;locus_tag=GGE_1837 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 6999 7281 . - . ID=id-GGE_1837-2;Dbxref=InterPro:IPR007416,PFAM:PF04320;Note=duf469~protein of unknown function duf469;gbkey=misc_feature;locus_tag=GGE_1837 GCA_000222085.2|AFQR01000036.1 Genbank gene 7435 8175 . - . ID=gene-GGE_1838;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank CDS 7435 8175 . - 0 ID=cds-EGT79655.1;Parent=gene-GGE_1838;Dbxref=GeneID:1176095,InterPro:IPR003358,PFAM:PF02390,TIGRFAM:TIGR00091,NCBI_GP:EGT79655.1;Name=EGT79655.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||;go_process=tRNA modification|0006400||;locus_tag=GGE_1838;product=tRNA guanine-N7--methyltransferase;protein_id=EGT79655.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7495 8116 . - . ID=id-GGE_1838;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7519 8056 . - . ID=id-GGE_1838-2;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7531 8080 . - . ID=id-GGE_1838-3;Dbxref=InterPro:IPR003358;Note=HAMAP:MF_01057~trna_methyltr_trmb~trna (guanine-n-7) methyltransferase;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7603 8008 . - . ID=id-GGE_1838-4;Dbxref=InterPro:IPR003358,TIGRFAM:TIGR00091;Note=tigr00091: trna (guanine-n(7)-)-methyltrans~trna (guanine-n-7) methyltransferase;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7603 8005 . - . ID=id-GGE_1838-5;Dbxref=InterPro:IPR003358,PFAM:PF02390;Note=methyltransf_4~trna (guanine-n-7) methyltransferase;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7642 7966 . - . ID=id-GGE_1838-6;Note=HMMPanther:PTHR23417~family not named;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7648 7954 . - . ID=id-GGE_1838-7;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=trmB;locus_tag=GGE_1838 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 7668 7677 . + . ID=id-AFQR01000036.1:7668..7677;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 8167 10452 . + . ID=gene-GGE_1839;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=GGE_1839 GCA_000222085.2|AFQR01000036.1 Genbank CDS 8167 10452 . + 0 ID=cds-EGT79656.1;Parent=gene-GGE_1839;Dbxref=GeneID:1172617,InterPro:IPR001650,InterPro:IPR005259,InterPro:IPR011545,InterPro:IPR014001,PFAM:PF00270,PFAM:PF00271,TIGRFAM:TIGR00595,NCBI_GP:EGT79656.1;Name=EGT79656.1;Ontology_term=GO:0006260,GO:0005524,GO:0008026,GO:0003677,GO:0004386,GO:0003676;gbkey=CDS;gene=priA;go_function=ATP binding|0005524||,ATP-dependent helicase activity|0008026||,DNA binding|0003677||,helicase activity|0004386||,nucleic acid binding|0003676||;go_process=DNA replication|0006260||;locus_tag=GGE_1839;product=putative helicase-like protein;protein_id=EGT79656.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8263 10354 . + . ID=id-GGE_1839;Note=multi-dom%3B label: PRK05580;gbkey=misc_feature;gene=priA;locus_tag=GGE_1839 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8461 9112 . + . ID=id-GGE_1839-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=priA;locus_tag=GGE_1839 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8578 8587 . + . ID=id-GGE_1839-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=priA;locus_tag=GGE_1839 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8926 9685 . + . ID=id-GGE_1839-4;Dbxref=InterPro:IPR005259,TIGRFAM:TIGR00595;Note=pria: primosomal protein n'~primosomal protein n;gbkey=misc_feature;gene=priA;locus_tag=GGE_1839 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8212 9715 . - . ID=id-AFQR01000036.1:8212..9715;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8233 10360 . - . ID=id-AFQR01000036.1:8233..10360;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8422 9775 . - . ID=id-AFQR01000036.1:8422..9775;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8425 9772 . - . ID=id-AFQR01000036.1:8425..9772;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8584 8926 . - . ID=id-AFQR01000036.1:8584..8926;Note=HMMPanther:PTHR24031:SF85~subfamily not named~HMMPanther:PTHR24031~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8593 8917 . - . ID=id-AFQR01000036.1:8593..8917;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8593 8860 . - . ID=id-AFQR01000036.1:8593..8860;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8599 9736 . - . ID=id-AFQR01000036.1:8599..9736;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8611 8917 . - . ID=id-AFQR01000036.1:8611..8917;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8644 9676 . - . ID=id-AFQR01000036.1:8644..9676;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8647 9631 . - . ID=id-AFQR01000036.1:8647..9631;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 8668 8896 . - . ID=id-AFQR01000036.1:8668..8896;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 10492 11538 . - . ID=gene-GGE_1840;Name=GGE_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1840 GCA_000222085.2|AFQR01000036.1 Genbank CDS 10492 11538 . - 0 ID=cds-EGT79657.1;Parent=gene-GGE_1840;Dbxref=GeneID:1176280,InterPro:IPR002549,PFAM:PF01594,NCBI_GP:EGT79657.1;Name=EGT79657.1;Note=HI_0338;gbkey=CDS;locus_tag=GGE_1840;product=UPF0118 membrane protein;protein_id=EGT79657.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10498 11527 . - . ID=id-GGE_1840;Note=multi-dom%3B label: yhhT;gbkey=misc_feature;locus_tag=GGE_1840 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10519 11500 . - . ID=id-GGE_1840-2;Note=superfamily%3B label: UPF0118 superfamily;gbkey=misc_feature;locus_tag=GGE_1840 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10525 11449 . - . ID=id-GGE_1840-3;Dbxref=InterPro:IPR002549,PFAM:PF01594;Note=HMMPanther:PTHR21716~family not named~uncharacterised protein family upf0118~upf0118~uncharacterised protein family upf0118;gbkey=misc_feature;locus_tag=GGE_1840 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10528 10588 . - . ID=id-GGE_1840-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1840 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10534 11209 . + . ID=id-AFQR01000036.1:10534..11209;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10537 11272 . + . ID=id-AFQR01000036.1:10537..11272;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10540 10918 . + . ID=id-AFQR01000036.1:10540..10918;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10549 10678 . + . ID=id-AFQR01000036.1:10549..10678;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10552 11365 . + . ID=id-AFQR01000036.1:10552..11365;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 11365 . + . ID=id-AFQR01000036.1:10561..11365;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 11263 . + . ID=id-AFQR01000036.1:10561..11263;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 11167 . + . ID=id-AFQR01000036.1:10561..11167;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 11080 . + . ID=id-AFQR01000036.1:10561..11080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 10912 . + . ID=id-AFQR01000036.1:10561..10912;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 10561 10666 . + . ID=id-AFQR01000036.1:10561..10666;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11506 11515 . + . ID=id-AFQR01000036.1:11506..11515;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 11538 11876 . - . ID=gene-GGE_1841;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=GGE_1841 GCA_000222085.2|AFQR01000036.1 Genbank CDS 11538 11876 . - 0 ID=cds-EGT79658.1;Parent=gene-GGE_1841;Dbxref=GeneID:1169936,InterPro:IPR002187,InterPro:IPR002332,InterPro:IPR011322,InterPro:IPR015867,InterPro:IPR017918,PFAM:PF00543,NCBI_GP:EGT79658.1;Name=EGT79658.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnB;go_function=enzyme regulator activity|0030234||;go_process=regulation of nitrogen utilization|0006808||;locus_tag=GGE_1841;product=Nitrogen regulatory protein P-II;protein_id=EGT79658.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11538 11874 . - . ID=id-GGE_1841;Dbxref=InterPro:IPR002187,InterPro:IPR011322,InterPro:IPR015867;Note=ProfileScan:PS51343~pii_glnb_dom~nitrogen regulatory protein pii~Gene3D:3.30.70.120~nitrogen regulatory protein pii/atp phosphoribosyltransferase~superfamily:SSF54913~glnb-like~nitrogen regulatory pii-like%2C alpha/beta;gbkey=misc_feature;gene=glnB;locus_tag=GGE_1841 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11544 11586 . - . ID=id-GGE_1841-2;Dbxref=InterPro:IPR002187;Note=FPrintScan:PR00340~piiglnb~nitrogen regulatory protein pii;gbkey=misc_feature;gene=glnB;locus_tag=GGE_1841 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11550 11844 . - . ID=id-GGE_1841-3;Dbxref=InterPro:IPR002187,PFAM:PF00543;Note=superfamily~p-ii~nitrogen regulatory protein pii%3B label: P-II superfamily;gbkey=misc_feature;gene=glnB;locus_tag=GGE_1841 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11556 11676 . + . ID=id-AFQR01000036.1:11556..11676;Dbxref=InterPro:IPR002332;Note=PatternScan:PS00496~pii_glnb_ump~nitrogen regulatory protein p-ii%2C urydylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11580 11787 . + . ID=id-AFQR01000036.1:11580..11787;Dbxref=InterPro:IPR017918;Note=PatternScan:PS00638~pii_glnb_cter~nitrogen regulatory protein pii%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11595 11607 . + . ID=id-AFQR01000036.1:11595..11607;Dbxref=InterPro:IPR002187;Note=FPrintScan:PR00340~piiglnb~nitrogen regulatory protein pii;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11601 11787 . + . ID=id-AFQR01000036.1:11601..11787;Dbxref=InterPro:IPR002187;Note=FPrintScan:PR00340~piiglnb~nitrogen regulatory protein pii;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11610 11694 . + . ID=id-AFQR01000036.1:11610..11694;Dbxref=InterPro:IPR002187;Note=FPrintScan:PR00340~piiglnb~nitrogen regulatory protein pii;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 11878 12519 . - . ID=gene-GGE_1842;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank CDS 11878 12519 . - 0 ID=cds-EGT79659.1;Parent=gene-GGE_1842;Dbxref=GeneID:1170995,InterPro:IPR001453,InterPro:IPR008284,InterPro:IPR020817,PFAM:PF00994,TIGRFAM:TIGR00177,NCBI_GP:EGT79659.1;Name=EGT79659.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||;locus_tag=GGE_1842;product=Molybdopterin adenylyltransferase;protein_id=EGT79659.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11926 12328 . - . ID=id-GGE_1842;Dbxref=InterPro:IPR001453;Note=Gene3D:3.40.980.10~molybdopterin binding;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11935 12448 . - . ID=id-GGE_1842-2;Dbxref=InterPro:IPR001453;Note=superfamily:SSF53218~molybdenum cofactor biosynthesis proteins~molybdopterin binding;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11938 12316 . - . ID=id-GGE_1842-3;Dbxref=InterPro:IPR020817,TIGRFAM:TIGR00177;Note=molyb_syn: molybdenum cofactor synthesis do~molybdenum cofactor synthesis;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11941 12376 . - . ID=id-GGE_1842-4;Note=specific~superfamily%3B label: MoCF_BD superfamily;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11953 12298 . - . ID=id-GGE_1842-5;Dbxref=InterPro:IPR001453,PFAM:PF00994;Note=mocf_biosynth~molybdopterin binding;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11965 12418 . - . ID=id-GGE_1842-6;Note=HMMPanther:PTHR10192~molybdopterin biosynthesis protein;gbkey=misc_feature;gene=mog;locus_tag=GGE_1842 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 11920 12136 . + . ID=id-AFQR01000036.1:11920..12136;Dbxref=InterPro:IPR008284;Note=PatternScan:PS01078~mocf_biosynthesis_1~molybdenum cofactor biosynthesis%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12458 12467 . + . ID=id-AFQR01000036.1:12458..12467;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12536 12545 . - . ID=id-AFQR01000036.1:12536..12545;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 12554 12910 . - . ID=gene-GGE_1843;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=GGE_1843 GCA_000222085.2|AFQR01000036.1 Genbank CDS 12554 12910 . - 0 ID=cds-EGT79660.1;Parent=gene-GGE_1843;Dbxref=GeneID:1170635,InterPro:IPR000829,PFAM:PF01219,NCBI_GP:EGT79660.1;Name=EGT79660.1;Ontology_term=GO:0008654,GO:0016020,GO:0004143;gbkey=CDS;gene=dgkA;go_component=membrane|0016020||;go_function=diacylglycerol kinase activity|0004143||;go_process=phospholipid biosynthetic process|0008654||;locus_tag=GGE_1843;product=Diacylglycerol kinase;protein_id=EGT79660.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12554 12905 . - . ID=id-GGE_1843;Note=superfamily%3B label: DAGK_prokar superfamily;gbkey=misc_feature;gene=dgkA;locus_tag=GGE_1843 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12596 12863 . - . ID=id-GGE_1843-2;Dbxref=InterPro:IPR000829,PFAM:PF01219;Note=dagk_prokar~diacylglycerol kinase%2C prokaryotic;gbkey=misc_feature;gene=dgkA;locus_tag=GGE_1843 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12590 12761 . + . ID=id-AFQR01000036.1:12590..12761;Dbxref=InterPro:IPR000829;Note=PatternScan:PS01069~dagk_prokar~diacylglycerol kinase%2C prokaryotic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12614 12848 . + . ID=id-AFQR01000036.1:12614..12848;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12614 12644 . + . ID=id-AFQR01000036.1:12614..12644;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12623 12722 . + . ID=id-AFQR01000036.1:12623..12722;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 12925 15156 . - . ID=gene-GGE_1844;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank CDS 12925 15156 . - 0 ID=cds-EGT79661.1;Parent=gene-GGE_1844;Dbxref=GeneID:1172903,InterPro:IPR002912,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,PFAM:PF01842,PFAM:PF02824,PFAM:PF04607,TIGRFAM:TIGR00691,NCBI_GP:EGT79661.1;Name=EGT79661.1;Ontology_term=GO:0015969,GO:0008152,GO:0016597;gbkey=CDS;gene=relA;go_function=amino acid binding|0016597||;go_process=guanosine tetraphosphate metabolic process|0015969||,metabolic process|0008152||;locus_tag=GGE_1844;product=GTP pyrophosphokinase;protein_id=EGT79661.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12925 15154 . - . ID=id-GGE_1844;Note=multi-dom%3B label: relA;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 12955 13525 . - . ID=id-GGE_1844-2;Note=superfamily:SSF109604~hd-domain/pdease-like;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13036 15043 . - . ID=id-GGE_1844-3;Dbxref=InterPro:IPR004811,TIGRFAM:TIGR00691;Note=spot_rela: rela/spot family protein~rela/spot protein;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13342 14740 . - . ID=id-GGE_1844-4;Note=HMMPanther:PTHR21262~family not named;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13399 13408 . - . ID=id-GGE_1844-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13519 13564 . - . ID=id-GGE_1844-6;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature;gene=relA;locus_tag=GGE_1844 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13105 14143 . + . ID=id-AFQR01000036.1:13105..14143;Dbxref=InterPro:IPR004095,PFAM:PF02824;Note=specific~superfamily~tgs~tgs%3B label: TGS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13117 14140 . + . ID=id-AFQR01000036.1:13117..14140;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13120 14938 . + . ID=id-AFQR01000036.1:13120..14938;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13132 14929 . + . ID=id-AFQR01000036.1:13132..14929;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13141 14938 . + . ID=id-AFQR01000036.1:13141..14938;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13147 14104 . + . ID=id-AFQR01000036.1:13147..14104;Dbxref=InterPro:IPR012676;Note=superfamily:SSF81271~tgs-like~tgs-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13168 14914 . + . ID=id-AFQR01000036.1:13168..14914;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13255 13684 . + . ID=id-AFQR01000036.1:13255..13684;Dbxref=InterPro:IPR007685,PFAM:PF04607;Note=rela_spot~rela/spot;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 13291 13615 . + . ID=id-AFQR01000036.1:13291..13615;Note=specific~superfamily%3B label: NT_Pol-beta-like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 15433 15481 . - . ID=id-AFQR01000036.1:15433..15481;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 15481 15640 . + . ID=id-AFQR01000036.1:15481..15640;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 15481 15559 . + . ID=id-AFQR01000036.1:15481..15559;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16008 16558 . + . ID=id-GeneID:4102009;Dbxref=GeneID:4102009;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16075 16204 . + . ID=id-AFQR01000036.1:16075..16204;Note=superfamily%3B label: COG3676 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 16228 16545 . + . ID=gene-GGE_1845;Name=GGE_1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1845 GCA_000222085.2|AFQR01000036.1 Genbank CDS 16228 16545 . + 0 ID=cds-EGT79662.1;Parent=gene-GGE_1845;Dbxref=InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR015422,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF08534,NCBI_GP:EGT79662.1;Name=EGT79662.1;Note=HI_1328.1;Ontology_term=GO:0045454,GO:0006662,GO:0003824,GO:0009055,GO:0016491,GO:0015035,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||,electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||,pyridoxal phosphate binding|0030170||;go_process=cell redox homeostasis|0045454||,glycerol ether metabolic process|0006662||;locus_tag=GGE_1845;product=Conserved Uncharacterized transposase-like protein;protein_id=EGT79662.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16243 16522 . + . ID=id-GGE_1845;Note=superfamily%3B label: COG3676 superfamily;gbkey=misc_feature;locus_tag=GGE_1845 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16819 16828 . + . ID=id-AFQR01000036.1:16819..16828;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 16966 17667 . - . ID=gene-GGE_1846;Name=GGE_1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1846 GCA_000222085.2|AFQR01000036.1 Genbank CDS 16966 17667 . - 0 ID=cds-EGT79663.1;Parent=gene-GGE_1846;Dbxref=GeneID:190150353,InterPro:IPR002654,PFAM:PF01755,NCBI_GP:EGT79663.1;Name=EGT79663.1;Note=YP_001968878;Ontology_term=GO:0009103;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_1846;product=putative glycosyltransferase;protein_id=EGT79663.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16993 17332 . - . ID=id-GGE_1846;Dbxref=InterPro:IPR002654,PFAM:PF01755;Note=glyco_transf_25~glycosyl transferase%2C family 25;gbkey=misc_feature;locus_tag=GGE_1846 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 16996 17269 . - . ID=id-GGE_1846-2;Note=specific~superfamily%3B label: Glyco_transf_25;gbkey=misc_feature;locus_tag=GGE_1846 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17203 17287 . - . ID=id-GGE_1846-3;Note=superfamily%3B label: PHA02688 superfamily;gbkey=misc_feature;locus_tag=GGE_1846 GCA_000222085.2|AFQR01000036.1 Genbank gene 17733 19799 . - . ID=gene-GGE_1847;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank CDS 17733 19799 . - 0 ID=cds-EGT79664.1;Parent=gene-GGE_1847;Dbxref=GeneID:166227914,InterPro:IPR002311,InterPro:IPR006194,InterPro:IPR008909,InterPro:IPR015944,InterPro:IPR023279,PFAM:PF02092,PFAM:PF05746,TIGRFAM:TIGR00211,NCBI_GP:EGT79664.1;Name=EGT79664.1;Ontology_term=GO:0006420,GO:0006426,GO:0006412,GO:0005737,GO:0005524,GO:0004814,GO:0004820,GO:0000166;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,arginine-tRNA ligase activity|0004814||,glycine-tRNA ligase activity|0004820||,nucleotide binding|0000166||;go_process=arginyl-tRNA aminoacylation|0006420||,glycyl-tRNA aminoacylation|0006426||,translation|0006412||;locus_tag=GGE_1847;product=Glycyl-tRNA synthetase beta subunit;protein_id=EGT79664.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17733 19797 . - . ID=id-GGE_1847;Dbxref=InterPro:IPR015944,TIGRFAM:TIGR00211;Note=multi-dom~glys: glycyl-trna synthetase%2C beta subunit~glycyl-trna synthetase%2C class iic%2C beta subunit%3B label: glyS;gbkey=misc_feature;gene=glyS;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17742 19788 . - . ID=id-GGE_1847-2;Dbxref=InterPro:IPR015944;Note=HAMAP:MF_00255~gly_trna_synth_beta~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature;gene=glyS;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17751 19377 . - . ID=id-GGE_1847-3;Note=superfamily%3B label: tRNA_synt_2f superfamily;gbkey=misc_feature;gene=glyS;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17751 19374 . - . ID=id-GGE_1847-4;Dbxref=InterPro:IPR002311,PFAM:PF02092;Note=trna_synt_2f~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature;gene=glyS;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17754 17775 . - . ID=id-GGE_1847-5;Dbxref=InterPro:IPR002311;Note=FPrintScan:PR01045~trnasynthgb~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature;gene=glyS;locus_tag=GGE_1847 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17766 19170 . + . ID=id-AFQR01000036.1:17766..19170;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17772 18465 . + . ID=id-AFQR01000036.1:17772..18465;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17772 18234 . + . ID=id-AFQR01000036.1:17772..18234;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17772 17883 . + . ID=id-AFQR01000036.1:17772..17883;Dbxref=InterPro:IPR002311;Note=FPrintScan:PR01045~trnasynthgb~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17778 19551 . + . ID=id-AFQR01000036.1:17778..19551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17781 18471 . + . ID=id-AFQR01000036.1:17781..18471;Dbxref=InterPro:IPR002311;Note=FPrintScan:PR01045~trnasynthgb~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17784 18687 . + . ID=id-AFQR01000036.1:17784..18687;Dbxref=InterPro:IPR002311;Note=FPrintScan:PR01045~trnasynthgb~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 17793 18915 . + . ID=id-AFQR01000036.1:17793..18915;Dbxref=InterPro:IPR002311;Note=FPrintScan:PR01045~trnasynthgb~glycyl-trna synthetase%2C class iic%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 18015 19479 . + . ID=id-AFQR01000036.1:18015..19479;Dbxref=InterPro:IPR008909,PFAM:PF05746;Note=dalr_1~dalr anticodon binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 18042 18828 . + . ID=id-AFQR01000036.1:18042..18828;Dbxref=InterPro:IPR023279;Note=Gene3D:1.10.3210.10~hd domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 18603 18822 . + . ID=id-AFQR01000036.1:18603..18822;Dbxref=InterPro:IPR006194;Note=ProfileScan:PS50861~aa_trna_ligase_ii_glyab~glycyl-trna synthetase%2C class ii%2C heterodimeric;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 18896 18905 . + . ID=id-AFQR01000036.1:18896..18905;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 19817 20269 . - . ID=gene-GGE_1848;Name=GGE_1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1848 GCA_000222085.2|AFQR01000036.1 Genbank CDS 19817 20269 . - 0 ID=cds-EGT79665.1;Parent=gene-GGE_1848;Dbxref=InterPro:IPR022548,PFAM:PF11008,NCBI_GP:EGT79665.1;Name=EGT79665.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_1848;product=putative lipoprotein;protein_id=EGT79665.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 19817 19865 . - . ID=id-GGE_1848;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1848 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 19829 19844 . - . ID=id-GGE_1848-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1848 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 19862 20141 . - . ID=id-GGE_1848-3;Note=superfamily%3B label: DUF2846 superfamily;gbkey=misc_feature;locus_tag=GGE_1848 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 19862 20132 . - . ID=id-GGE_1848-4;Dbxref=InterPro:IPR022548,PFAM:PF11008;Note=duf2846~domain of unknown function duf2846;gbkey=misc_feature;locus_tag=GGE_1848 GCA_000222085.2|AFQR01000036.1 Genbank gene 20329 20868 . - . ID=gene-GGE_1849;Name=GGE_1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1849 GCA_000222085.2|AFQR01000036.1 Genbank CDS 20329 20868 . - 0 ID=cds-EGT79666.1;Parent=gene-GGE_1849;Dbxref=InterPro:IPR000560,PFAM:PF00328,NCBI_GP:EGT79666.1;Name=EGT79666.1;Note=Hypothetical histidine phosphatase superfamily%2C clade-2;Ontology_term=GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||;locus_tag=GGE_1849;product=putative histidine phosphatase superfamily%2C clade-2;protein_id=EGT79666.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 20329 20854 . - . ID=id-GGE_1849;Note=superfamily:SSF53254~phosphoglycerate mutase-like;gbkey=misc_feature;locus_tag=GGE_1849 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 20365 20638 . - . ID=id-GGE_1849-2;Dbxref=InterPro:IPR000560,PFAM:PF00328;Note=acid_phosphat_a~histidine phosphatase superfamily%2C clade-2;gbkey=misc_feature;locus_tag=GGE_1849 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 20383 20626 . - . ID=id-GGE_1849-3;Note=superfamily%3B label: HP superfamily;gbkey=misc_feature;locus_tag=GGE_1849 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 20425 20758 . - . ID=id-GGE_1849-4;Note=Gene3D:3.40.50.1240;gbkey=misc_feature;locus_tag=GGE_1849 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 20380 20530 . + . ID=id-AFQR01000036.1:20380..20530;Dbxref=InterPro:IPR000560;Note=PatternScan:PS00778~his_acid_phosphat_2~histidine phosphatase superfamily%2C clade-2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 21052 21594 . - . ID=gene-GGE_1850;Name=GGE_1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank CDS 21052 21594 . - 0 ID=cds-EGT79667.1;Parent=gene-GGE_1850;Dbxref=InterPro:IPR000560,PFAM:PF00328,NCBI_GP:EGT79667.1;Name=EGT79667.1;Note=Hypothetical phosphoglycerate mutase-like;Ontology_term=GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||;locus_tag=GGE_1850;product=putative phosphoglycerate mutase-like protein;protein_id=EGT79667.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21079 21100 . - . ID=id-GGE_1850;Note=seg;gbkey=misc_feature;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21154 21433 . - . ID=id-GGE_1850-2;Note=Gene3D:3.40.50.1240;gbkey=misc_feature;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21154 21427 . - . ID=id-GGE_1850-3;Note=superfamily:SSF53254~phosphoglycerate mutase-like;gbkey=misc_feature;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21160 21388 . - . ID=id-GGE_1850-4;Dbxref=InterPro:IPR000560,PFAM:PF00328;Note=acid_phosphat_a~histidine phosphatase superfamily%2C clade-2;gbkey=misc_feature;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21160 21370 . - . ID=id-GGE_1850-5;Note=specific~superfamily%3B label: HP superfamily;gbkey=misc_feature;locus_tag=GGE_1850 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21560 21569 . + . ID=id-AFQR01000036.1:21560..21569;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 21604 22050 . - . ID=gene-GGE_1851;Name=GGE_1851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1851 GCA_000222085.2|AFQR01000036.1 Genbank CDS 21604 22050 . - 0 ID=cds-EGT79668.1;Parent=gene-GGE_1851;Dbxref=GeneID:301154906,NCBI_GP:EGT79668.1;Name=EGT79668.1;Note=CBW14369;gbkey=CDS;locus_tag=GGE_1851;product=Hypothetical protein;protein_id=EGT79668.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21649 21952 . + . ID=id-AFQR01000036.1:21649..21952;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21661 21664 . + . ID=id-AFQR01000036.1:21661..21664;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21664 21946 . + . ID=id-AFQR01000036.1:21664..21946;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 21673 21763 . + . ID=id-AFQR01000036.1:21673..21763;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 22050 22424 . - . ID=gene-GGE_1852;Name=GGE_1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1852 GCA_000222085.2|AFQR01000036.1 Genbank CDS 22050 22424 . - 0 ID=cds-EGT79669.1;Parent=gene-GGE_1852;Dbxref=GeneID:223041794,NCBI_GP:EGT79669.1;Name=EGT79669.1;Note=ZP_03611984;gbkey=CDS;locus_tag=GGE_1852;product=putative lipoprotein;protein_id=EGT79669.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22050 22101 . - . ID=id-GGE_1852;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1852 GCA_000222085.2|AFQR01000036.1 Genbank gene 22429 22689 . - . ID=gene-GGE_1853;Name=GGE_1853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1853 GCA_000222085.2|AFQR01000036.1 Genbank CDS 22429 22689 . - 0 ID=cds-EGT79670.1;Parent=gene-GGE_1853;Dbxref=InterPro:IPR017167,PIR:PIRSF037291,NCBI_GP:EGT79670.1;Name=EGT79670.1;Note=HI_0926;gbkey=CDS;locus_tag=GGE_1853;product=putative uncharacterized;protein_id=EGT79670.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22429 22687 . - . ID=id-GGE_1853;Dbxref=InterPro:IPR017167,PIR:PIRSF037291;Note=glutaredoxin-related protein%2C hi0926 type~uncharacterised conserved protein ucp037291%2C glutaredoxin-related;gbkey=misc_feature;locus_tag=GGE_1853 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22429 22678 . - . ID=id-GGE_1853-2;Note=superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_1853 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22700 22709 . + . ID=id-AFQR01000036.1:22700..22709;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22718 22727 . - . ID=id-AFQR01000036.1:22718..22727;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 22747 23736 . - . ID=gene-GGE_1854;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank CDS 22747 23736 . - 0 ID=cds-EGT79671.1;Parent=gene-GGE_1854;Dbxref=GeneID:1174510,InterPro:IPR002310,InterPro:IPR006194,PFAM:PF02091,TIGRFAM:TIGR00388,NCBI_GP:EGT79671.1;Name=EGT79671.1;Ontology_term=GO:0006426,GO:0006412,GO:0005737,GO:0005524,GO:0004820,GO:0000166;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,glycine-tRNA ligase activity|0004820||,nucleotide binding|0000166||;go_process=glycyl-tRNA aminoacylation|0006426||,translation|0006412||;locus_tag=GGE_1854;product=Glycyl-tRNA synthetase alpha subunit;protein_id=EGT79671.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22837 23386 . - . ID=id-GGE_1854;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22852 23632 . - . ID=id-GGE_1854-2;Dbxref=InterPro:IPR002310,TIGRFAM:TIGR00388;Note=multi-dom~glyq: glycyl-trna synthetase%2C alpha subunit~glycyl-trna synthetase%2C class iic%2C alpha subunit%3B label: glyQ;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22852 23608 . - . ID=id-GGE_1854-3;Dbxref=InterPro:IPR002310;Note=HAMAP:MF_00254~gly_trna_synth_alpha~glycyl-trna synthetase%2C class iic%2C alpha subunit~superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22855 23602 . - . ID=id-GGE_1854-4;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22855 23590 . - . ID=id-GGE_1854-5;Dbxref=InterPro:IPR006194;Note=ProfileScan:PS50861~aa_trna_ligase_ii_glyab~glycyl-trna synthetase%2C class ii%2C heterodimeric;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22858 23614 . - . ID=id-GGE_1854-6;Dbxref=InterPro:IPR002310,PFAM:PF02091;Note=trna-synt_2e~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature;gene=glyQ;locus_tag=GGE_1854 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22795 23317 . + . ID=id-AFQR01000036.1:22795..23317;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22795 23014 . + . ID=id-AFQR01000036.1:22795..23014;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22798 23590 . + . ID=id-AFQR01000036.1:22798..23590;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22810 23248 . + . ID=id-AFQR01000036.1:22810..23248;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22810 23077 . + . ID=id-AFQR01000036.1:22810..23077;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22813 23506 . + . ID=id-AFQR01000036.1:22813..23506;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22822 23170 . + . ID=id-AFQR01000036.1:22822..23170;Dbxref=InterPro:IPR002310;Note=FPrintScan:PR01044~trnasynthga~glycyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 22996 23476 . + . ID=id-AFQR01000036.1:22996..23476;Note=Gene3D:1.20.58.180;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23723 23732 . + . ID=id-AFQR01000036.1:23723..23732;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 23854 24906 . + . ID=gene-GGE_1855;Name=GGE_1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank CDS 23854 24906 . + 0 ID=cds-EGT79672.1;Parent=gene-GGE_1855;Dbxref=InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT79672.1;Name=EGT79672.1;Note=Hypothetical tonB-dependent receptor%2C plug;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1855;product=putative tonB-dependent receptor%2C plug;protein_id=EGT79672.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23875 23884 . + . ID=id-GGE_1855;Note=seg;gbkey=misc_feature;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23908 24262 . + . ID=id-GGE_1855-2;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23935 24823 . + . ID=id-GGE_1855-3;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23977 24172 . + . ID=id-GGE_1855-4;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23995 24724 . + . ID=id-GGE_1855-5;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_1855 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 23874 23883 . - . ID=id-AFQR01000036.1:23874..23883;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 25102 25827 . + . ID=gene-GGE_1856;Name=GGE_1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1856 GCA_000222085.2|AFQR01000036.1 Genbank CDS 25102 25827 . + 0 ID=cds-EGT79673.1;Parent=gene-GGE_1856;Dbxref=InterPro:IPR000531,PFAM:PF00593,NCBI_GP:EGT79673.1;Name=EGT79673.1;Note=Hypothetical tonB-dependent receptor%2C beta-barrel;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1856;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT79673.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25102 25825 . + . ID=id-GGE_1856;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1856 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25108 25822 . + . ID=id-GGE_1856-2;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1856 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25108 25810 . + . ID=id-GGE_1856-3;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1856 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25117 25813 . + . ID=id-GGE_1856-4;Note=specific~superfamily%3B label: ligand_gated_channel;gbkey=misc_feature;locus_tag=GGE_1856 GCA_000222085.2|AFQR01000036.1 Genbank gene 25901 26686 . + . ID=gene-GGE_1857;Name=GGE_1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1857 GCA_000222085.2|AFQR01000036.1 Genbank CDS 25901 26686 . + 0 ID=cds-EGT79674.1;Parent=gene-GGE_1857;Dbxref=GeneID:301154911,NCBI_GP:EGT79674.1;Name=EGT79674.1;Note=CBW14374;gbkey=CDS;locus_tag=GGE_1857;product=putative helical backbone metal receptor;protein_id=EGT79674.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25958 26627 . + . ID=id-GGE_1857;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature;locus_tag=GGE_1857 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25964 26270 . + . ID=id-GGE_1857-2;Note=superfamily%3B label: TroA-like superfamily;gbkey=misc_feature;locus_tag=GGE_1857 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25924 25933 . - . ID=id-AFQR01000036.1:25924..25933;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25943 26342 . - . ID=id-AFQR01000036.1:25943..26342;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 25961 26405 . - . ID=id-AFQR01000036.1:25961..26405;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26595 26604 . - . ID=id-AFQR01000036.1:26595..26604;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 26714 27691 . + . ID=gene-GGE_1858;Name=GGE_1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank CDS 26714 27691 . + 0 ID=cds-EGT79675.1;Parent=gene-GGE_1858;Dbxref=GeneID:315634132,InterPro:IPR000522,PFAM:PF01032,NCBI_GP:EGT79675.1;Name=EGT79675.1;Note=ZP_07889421;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1858;product=vitamin B12 ABC superfamily ATP binding cassette transporter%2C permease protein;protein_id=EGT79675.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26714 26783 . + . ID=id-GGE_1858;Note=seg;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26720 27668 . + . ID=id-GGE_1858-2;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26735 26768 . + . ID=id-GGE_1858-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26750 27647 . + . ID=id-GGE_1858-4;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26750 27632 . + . ID=id-GGE_1858-5;Dbxref=InterPro:IPR000522,PFAM:PF01032;Note=feccd~abc transporter%2C permease protein;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26888 27491 . + . ID=id-GGE_1858-6;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;locus_tag=GGE_1858 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26737 26746 . - . ID=id-AFQR01000036.1:26737..26746;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26753 27539 . - . ID=id-AFQR01000036.1:26753..27539;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26768 27143 . - . ID=id-AFQR01000036.1:26768..27143;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26774 27521 . - . ID=id-AFQR01000036.1:26774..27521;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 27599 . - . ID=id-AFQR01000036.1:26783..27599;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 27410 . - . ID=id-AFQR01000036.1:26783..27410;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 27248 . - . ID=id-AFQR01000036.1:26783..27248;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 27122 . - . ID=id-AFQR01000036.1:26783..27122;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 27035 . - . ID=id-AFQR01000036.1:26783..27035;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 26954 . - . ID=id-AFQR01000036.1:26783..26954;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 26783 26867 . - . ID=id-AFQR01000036.1:26783..26867;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27477 27486 . - . ID=id-AFQR01000036.1:27477..27486;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 27691 28428 . + . ID=gene-GGE_1859;Name=GGE_1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank CDS 27691 28428 . + 0 ID=cds-EGT79676.1;Parent=gene-GGE_1859;Dbxref=GeneID:315634133,InterPro:IPR003439,PFAM:PF00005,NCBI_GP:EGT79676.1;Name=EGT79676.1;Note=ZP_07889422;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_1859;product=hemin ABC superfamily ATP binding cassette transporter%2C ABC protein;protein_id=EGT79676.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27691 28423 . + . ID=id-GGE_1859;Note=HMMPanther:PTHR24220:SF31~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27691 28378 . + . ID=id-GGE_1859-2;Note=multi-dom%3B label: FepC;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27691 28351 . + . ID=id-GGE_1859-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27691 28339 . + . ID=id-GGE_1859-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27697 28369 . + . ID=id-GGE_1859-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27700 28312 . + . ID=id-GGE_1859-6;Note=specific~superfamily%3B label: ABC_Iron-Siderophores_B12_Hemin;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 27802 28051 . + . ID=id-GGE_1859-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1859 GCA_000222085.2|AFQR01000036.1 Genbank gene 28476 29096 . - . ID=gene-GGE_1860;Name=GGE_1860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1860 GCA_000222085.2|AFQR01000036.1 Genbank CDS 28476 29096 . - 0 ID=cds-EGT79677.1;Parent=gene-GGE_1860;Dbxref=GeneID:68249602,NCBI_GP:EGT79677.1;Name=EGT79677.1;Note=YP_248714;gbkey=CDS;locus_tag=GGE_1860;product=Hypothetical protein;protein_id=EGT79677.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 28530 28650 . + . ID=id-AFQR01000036.1:28530..28650;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 28530 28536 . + . ID=id-AFQR01000036.1:28530..28536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 29180 29717 . + . ID=id-AFQR01000036.1:29180..29717;Note=multi-dom%3B label: COG1373;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 29745 29754 . - . ID=id-AFQR01000036.1:29745..29754;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 29808 29817 . + . ID=id-AFQR01000036.1:29808..29817;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 29885 29894 . + . ID=id-AFQR01000036.1:29885..29894;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30171 30204 . - . ID=id-AFQR01000036.1:30171..30204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30174 30603 . + . ID=id-AFQR01000036.1:30174..30603;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30180 30252 . + . ID=id-AFQR01000036.1:30180..30252;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30186 30543 . + . ID=id-AFQR01000036.1:30186..30543;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30189 30267 . + . ID=id-AFQR01000036.1:30189..30267;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30204 30525 . + . ID=id-AFQR01000036.1:30204..30525;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30204 30429 . + . ID=id-AFQR01000036.1:30204..30429;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30726 30765 . + . ID=id-AFQR01000036.1:30726..30765;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 30729 30789 . + . ID=id-AFQR01000036.1:30729..30789;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 31507 35229 . - . ID=gene-GGE_1861;Name=GGE_1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank CDS 31507 35229 . - 0 ID=cds-EGT79678.1;Parent=gene-GGE_1861;Dbxref=GeneID:315634395,InterPro:IPR000489,InterPro:IPR003726,InterPro:IPR003759,InterPro:IPR004223,InterPro:IPR006158,InterPro:IPR011005,InterPro:IPR011822,PFAM:PF00809,PFAM:PF02310,PFAM:PF02574,PFAM:PF02607,PFAM:PF02965,PIR:PIRSF000381,TIGRFAM:TIGR02082,NCBI_GP:EGT79678.1;Name=EGT79678.1;Note=ZP_07889682;Ontology_term=GO:0044237,GO:0009086,GO:0042558,GO:0005622,GO:0031419,GO:0008898,GO:0046872,GO:0008705,GO:0008270;gbkey=CDS;go_component=intracellular|0005622||;go_function=cobalamin binding|0031419||,homocysteine S-methyltransferase activity|0008898||,metal ion binding|0046872||,methionine synthase activity|0008705||,zinc ion binding|0008270||;go_process=cellular metabolic process|0044237||,methionine biosynthetic process|0009086||,pteridine-containing compound metabolic process|0042558||;locus_tag=GGE_1861;product=methionine synthase;protein_id=EGT79678.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31507 35173 . - . ID=id-GGE_1861;Dbxref=InterPro:IPR011822,PIR:PIRSF000381;Note=cobalamin-dependent methionine synthase~5-methyltetrahydrofolate--homocysteine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31507 35170 . - . ID=id-GGE_1861-2;Note=multi-dom%3B label: metH;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31516 32584 . - . ID=id-GGE_1861-3;Dbxref=InterPro:IPR003726;Note=Gene3D:3.20.20.330~homocysteine s-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31519 32689 . - . ID=id-GGE_1861-4;Dbxref=InterPro:IPR003726;Note=superfamily:SSF82282~homocysteine s-methyltransferase~homocysteine s-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31522 32503 . - . ID=id-GGE_1861-5;Note=superfamily%3B label: MHT1 superfamily;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31522 32464 . - . ID=id-GGE_1861-6;Dbxref=InterPro:IPR003726;Note=ProfileScan:PS50970~hcy~homocysteine s-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31543 35068 . - . ID=id-GGE_1861-7;Dbxref=InterPro:IPR011822,TIGRFAM:TIGR02082;Note=meth: methionine synthase~5-methyltetrahydrofolate--homocysteine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31555 32434 . - . ID=id-GGE_1861-8;Dbxref=InterPro:IPR003726,PFAM:PF02574;Note=s-methyl_trans~homocysteine s-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31657 34699 . - . ID=id-GGE_1861-9;Note=HMMPanther:PTHR21091:SF9~5-methyltetrahydrofolate:homocysteine methyltransferase~HMMPanther:PTHR21091~family not named;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 33292 33301 . - . ID=id-GGE_1861-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35089 35098 . - . ID=id-GGE_1861-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1861 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31753 33475 . + . ID=id-AFQR01000036.1:31753..33475;Dbxref=InterPro:IPR003759,PFAM:PF02607;Note=b12-binding_2~methionine synthase%2C cobalamin (vitamin b12)-binding module%2C cap;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31762 33457 . + . ID=id-AFQR01000036.1:31762..33457;Dbxref=InterPro:IPR003759;Note=Gene3D:1.10.1240.10~methionine synthase%2C cobalamin (vitamin b12)-binding module%2C cap;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31777 33454 . + . ID=id-AFQR01000036.1:31777..33454;Dbxref=InterPro:IPR003759;Note=superfamily:SSF47644~methionine synthase domain~methionine synthase%2C cobalamin (vitamin b12)-binding module%2C cap;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31789 33745 . + . ID=id-AFQR01000036.1:31789..33745;Dbxref=InterPro:IPR006158,PFAM:PF02310;Note=b12-binding~cobalamin (vitamin b12)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31792 33451 . + . ID=id-AFQR01000036.1:31792..33451;Dbxref=InterPro:IPR003759;Note=ProfileScan:PS51337~b12_binding_nter~methionine synthase%2C cobalamin (vitamin b12)-binding module%2C cap;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31915 34693 . + . ID=id-AFQR01000036.1:31915..34693;Dbxref=InterPro:IPR004223,PFAM:PF02965;Note=superfamily~met_synt_b12~vitamin b12-dependent methionine synthase%2C activation domain%3B label: Met_synt_B12 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31918 33739 . + . ID=id-AFQR01000036.1:31918..33739;Dbxref=InterPro:IPR006158;Note=ProfileScan:PS51332~b12_binding~cobalamin (vitamin b12)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31960 33733 . + . ID=id-AFQR01000036.1:31960..33733;Dbxref=InterPro:IPR006158;Note=Gene3D:3.40.50.280~cobalamin (vitamin b12)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 31978 33724 . + . ID=id-AFQR01000036.1:31978..33724;Dbxref=InterPro:IPR006158;Note=superfamily:SSF52242~cobalamin (vitamin b12)-binding domain~cobalamin (vitamin b12)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32146 32569 . + . ID=id-AFQR01000036.1:32146..32569;Dbxref=InterPro:IPR000489,PFAM:PF00809;Note=pterin_bind~pterin-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32149 33478 . + . ID=id-AFQR01000036.1:32149..33478;Note=specific~superfamily%3B label: B12-binding_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32278 32569 . + . ID=id-AFQR01000036.1:32278..32569;Note=specific~superfamily%3B label: MeTr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32287 34387 . + . ID=id-AFQR01000036.1:32287..34387;Dbxref=InterPro:IPR004223;Note=Gene3D:3.10.196.10~vitamin b12-dependent methionine synthase%2C activation domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32293 32569 . + . ID=id-AFQR01000036.1:32293..32569;Dbxref=InterPro:IPR000489;Note=ProfileScan:PS50972~pterin_binding~pterin-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32308 32593 . + . ID=id-AFQR01000036.1:32308..32593;Dbxref=InterPro:IPR000489;Note=Gene3D:3.20.20.20~pterin-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32335 32569 . + . ID=id-AFQR01000036.1:32335..32569;Dbxref=InterPro:IPR011005;Note=superfamily:SSF51717~dihydropteroate synthetase-like~dihydropteroate synthase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32458 34207 . + . ID=id-AFQR01000036.1:32458..34207;Dbxref=InterPro:IPR004223;Note=superfamily:SSF56507~methionine synthase activation domain-like~vitamin b12-dependent methionine synthase%2C activation domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 32521 34195 . + . ID=id-AFQR01000036.1:32521..34195;Dbxref=InterPro:IPR004223;Note=ProfileScan:PS50974~adomet_activation~vitamin b12-dependent methionine synthase%2C activation domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 35334 35837 . - . ID=gene-GGE_1862;Name=GGE_1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1862 GCA_000222085.2|AFQR01000036.1 Genbank CDS 35334 35837 . - 0 ID=cds-EGT79679.1;Parent=gene-GGE_1862;Dbxref=GeneID:145630133,InterPro:IPR004496,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR00402,NCBI_GP:EGT79679.1;Name=EGT79679.1;Note=ZP_01785915;Ontology_term=GO:0009055,GO:0005506,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron ion binding|0005506||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1862;product=B12-dependent methionine synthase;protein_id=EGT79679.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35388 35778 . - . ID=id-GGE_1862;Dbxref=InterPro:IPR004496,TIGRFAM:TIGR00402;Note=napf: ferredoxin-type protein napf~ferredoxin-type protein napf;gbkey=misc_feature;locus_tag=GGE_1862 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35388 35637 . - . ID=id-GGE_1862-2;Note=multi-dom%3B label: napF;gbkey=misc_feature;locus_tag=GGE_1862 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35427 35547 . - . ID=id-GGE_1862-3;Note=superfamily%3B label: RNAP_RPB11_RPB3 superfamily;gbkey=misc_feature;locus_tag=GGE_1862 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35484 35688 . - . ID=id-GGE_1862-4;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_1862 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35370 35496 . + . ID=id-AFQR01000036.1:35370..35496;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35418 35754 . + . ID=id-AFQR01000036.1:35418..35754;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35424 35562 . + . ID=id-AFQR01000036.1:35424..35562;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35424 35469 . + . ID=id-AFQR01000036.1:35424..35469;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35442 35727 . + . ID=id-AFQR01000036.1:35442..35727;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35451 35487 . + . ID=id-AFQR01000036.1:35451..35487;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35457 35604 . + . ID=id-AFQR01000036.1:35457..35604;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35469 35487 . + . ID=id-AFQR01000036.1:35469..35487;Note=HMMPanther:PTHR24960:SF17~subfamily not named~HMMPanther:PTHR24960~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35481 35691 . + . ID=id-AFQR01000036.1:35481..35691;Note=multi-dom%3B label: PRK13795;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 35837 36448 . - . ID=gene-GGE_1863;Name=GGE_1863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1863 GCA_000222085.2|AFQR01000036.1 Genbank CDS 35837 36448 . - 0 ID=cds-EGT79680.1;Parent=gene-GGE_1863;Dbxref=GeneID:309973479,InterPro:IPR020945,PFAM:PF02613,NCBI_GP:EGT79680.1;Name=EGT79680.1;Note=ADO96680;gbkey=CDS;locus_tag=GGE_1863;product=Redox enzyme maturation protein REMP for DmsA;protein_id=EGT79680.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35837 36446 . - . ID=id-GGE_1863;Note=superfamily~superfamily:SSF89155~tord-like%3B label: Nitrate_red_del superfamily;gbkey=misc_feature;locus_tag=GGE_1863 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35945 36224 . - . ID=id-GGE_1863-2;Dbxref=InterPro:IPR020945,PFAM:PF02613;Note=nitrate_red_del~dmso/nitrate reductase chaperone;gbkey=misc_feature;locus_tag=GGE_1863 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35996 36242 . - . ID=id-GGE_1863-3;Note=Gene3D:1.10.3480.10;gbkey=misc_feature;locus_tag=GGE_1863 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 35891 36362 . + . ID=id-AFQR01000036.1:35891..36362;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36467 36476 . - . ID=id-AFQR01000036.1:36467..36476;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 36543 37382 . - . ID=gene-GGE_1864;Name=GGE_1864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1864 GCA_000222085.2|AFQR01000036.1 Genbank CDS 36543 37382 . - 0 ID=cds-EGT79681.1;Parent=gene-GGE_1864;Dbxref=GeneID:148826335,InterPro:IPR007059,PFAM:PF04976,NCBI_GP:EGT79681.1;Name=EGT79681.1;Note=YP_001291088;Ontology_term=GO:0019645,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=anaerobic electron transport chain|0019645||;locus_tag=GGE_1864;product=anaerobic dimethyl sulfoxide reductase chain C;protein_id=EGT79681.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36543 37350 . - . ID=id-GGE_1864;Dbxref=InterPro:IPR007059,PFAM:PF04976;Note=dmsc~dmso reductase anchor subunit (dmsc);gbkey=misc_feature;locus_tag=GGE_1864 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36555 37341 . - . ID=id-GGE_1864-2;Note=superfamily%3B label: DmsC superfamily;gbkey=misc_feature;locus_tag=GGE_1864 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36573 36612 . - . ID=id-GGE_1864-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1864 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37320 37329 . - . ID=id-GGE_1864-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1864 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36585 37098 . + . ID=id-AFQR01000036.1:36585..37098;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36603 36882 . + . ID=id-AFQR01000036.1:36603..36882;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36603 36804 . + . ID=id-AFQR01000036.1:36603..36804;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36612 37278 . + . ID=id-AFQR01000036.1:36612..37278;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36612 37197 . + . ID=id-AFQR01000036.1:36612..37197;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36612 37086 . + . ID=id-AFQR01000036.1:36612..37086;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36612 36984 . + . ID=id-AFQR01000036.1:36612..36984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 36612 36678 . + . ID=id-AFQR01000036.1:36612..36678;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 37384 38001 . - . ID=gene-GGE_1865;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank CDS 37384 38001 . - 0 ID=cds-EGT79682.1;Parent=gene-GGE_1865;Dbxref=GeneID:1169361,InterPro:IPR001450,InterPro:IPR014297,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00037,TIGRFAM:TIGR02951,NCBI_GP:EGT79682.1;Name=EGT79682.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;gene=dmsB;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1865;product=Anaerobic dimethyl sulfoxide reductase chain B;protein_id=EGT79682.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37384 37987 . - . ID=id-GGE_1865;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=dmsB;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37384 37615 . - . ID=id-GGE_1865-2;Note=Gene3D:3.30.70.20;gbkey=misc_feature;gene=dmsB;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37393 37867 . - . ID=id-GGE_1865-3;Dbxref=InterPro:IPR014297,TIGRFAM:TIGR02951;Note=multi-dom~dmso_dmsb: dimethylsulfoxide reductase%2C cha~dimethylsulphoxide reductase%2C chain b%3B label: DMSO_dmsB;gbkey=misc_feature;gene=dmsB;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37393 37855 . - . ID=id-GGE_1865-4;Note=HMMPanther:PTHR11938~family not named;gbkey=misc_feature;gene=dmsB;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37396 37471 . - . ID=id-GGE_1865-5;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature;gene=dmsB;locus_tag=GGE_1865 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37420 37681 . + . ID=id-AFQR01000036.1:37420..37681;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37453 37660 . + . ID=id-AFQR01000036.1:37453..37660;Dbxref=InterPro:IPR001450,PFAM:PF00037;Note=fer4~4fe-4s binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37474 37654 . + . ID=id-AFQR01000036.1:37474..37654;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37483 37555 . + . ID=id-AFQR01000036.1:37483..37555;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37507 37618 . + . ID=id-AFQR01000036.1:37507..37618;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37540 37570 . + . ID=id-AFQR01000036.1:37540..37570;Note=superfamily%3B label: RNAP_RPB11_RPB3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 37618 37741 . + . ID=id-AFQR01000036.1:37618..37741;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 38012 40432 . - . ID=gene-GGE_1866;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank CDS 38012 40432 . - 0 ID=cds-EGT79683.1;Parent=gene-GGE_1866;Dbxref=GeneID:1169360,InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR011888,PFAM:PF00384,PFAM:PF01568,PFAM:PF04879,TIGRFAM:TIGR01409,TIGRFAM:TIGR02166,NCBI_GP:EGT79683.1;Name=EGT79683.1;Ontology_term=GO:0055114,GO:0051539,GO:0005488,GO:0009389,GO:0009055,GO:0030151,GO:0016491;gbkey=CDS;gene=dmsA;go_function=4 iron 4 sulfur cluster binding|0051539||,binding|0005488||,dimethyl sulfoxide reductase activity|0009389||,electron carrier activity|0009055||,molybdenum ion binding|0030151||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1866;product=Anaerobic dimethyl sulfoxide reductase chain A;protein_id=EGT79683.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38012 38117 . - . ID=id-GGE_1866;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38033 40412 . - . ID=id-GGE_1866-2;Dbxref=InterPro:IPR011888,TIGRFAM:TIGR02166;Note=dmsa_ynfe: anaerobic dimethyl sulfoxid~anaerobic dimethyl sulphoxide reductase%2C subunit a%2C dmsa/ynfe;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38033 40409 . - . ID=id-GGE_1866-3;Note=multi-dom%3B label: dmsA_ynfE;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38033 38099 . - . ID=id-GGE_1866-4;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38135 40256 . - . ID=id-GGE_1866-5;Note=HMMPanther:PTHR11615:SF90~anaerobic dimethyl sulfoxide reductase chain a~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38147 38204 . - . ID=id-GGE_1866-6;Note=Gene3D:2.20.25.90;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38153 38195 . - . ID=id-GGE_1866-7;Dbxref=InterPro:IPR006963,PFAM:PF04879;Note=molybdop_fe4s4~molybdopterin oxidoreductase%2C fe4s4 domain;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38156 39938 . - . ID=id-GGE_1866-8;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38165 39893 . - . ID=id-GGE_1866-9;Note=specific~superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38342 39389 . - . ID=id-GGE_1866-10;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38597 38621 . - . ID=id-GGE_1866-11;Note=Gene3D:3.40.228.10;gbkey=misc_feature;gene=dmsA;locus_tag=GGE_1866 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38036 38489 . + . ID=id-AFQR01000036.1:38036..38489;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38045 38057 . + . ID=id-AFQR01000036.1:38045..38057;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38066 39539 . + . ID=id-AFQR01000036.1:38066..39539;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00490~molybdopterin_prok_2~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38072 38168 . + . ID=id-AFQR01000036.1:38072..38168;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00551~molybdopterin_prok_1~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38096 40181 . + . ID=id-AFQR01000036.1:38096..40181;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00932~molybdopterin_prok_3~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38348 40073 . + . ID=id-AFQR01000036.1:38348..40073;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38375 40067 . + . ID=id-AFQR01000036.1:38375..40067;Note=specific~superfamily%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38441 40004 . + . ID=id-AFQR01000036.1:38441..40004;Dbxref=InterPro:IPR009010;Note=Gene3D:2.40.40.20~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38534 39911 . + . ID=id-AFQR01000036.1:38534..39911;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 38651 39206 . + . ID=id-AFQR01000036.1:38651..39206;Note=Gene3D:3.40.50.740;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 40729 41835 . + . ID=gene-GGE_1867;Name=GGE_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1867 GCA_000222085.2|AFQR01000036.1 Genbank CDS 40729 41835 . + 0 ID=cds-EGT79684.1;Parent=gene-GGE_1867;Dbxref=GeneID:1175402,InterPro:IPR002931,PFAM:PF01841,NCBI_GP:EGT79684.1;Name=EGT79684.1;Note=HI_1048;gbkey=CDS;locus_tag=GGE_1867;product=Hypothetical protein;protein_id=EGT79684.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 40825 41704 . + . ID=id-GGE_1867;Note=multi-dom%3B label: COG1305;gbkey=misc_feature;locus_tag=GGE_1867 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 40765 40777 . - . ID=id-AFQR01000036.1:40765..40777;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 41020 41335 . - . ID=id-AFQR01000036.1:41020..41335;Note=Gene3D:3.90.260.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 41110 41194 . - . ID=id-AFQR01000036.1:41110..41194;Dbxref=InterPro:IPR002931,PFAM:PF01841;Note=transglut_core~transglutaminase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 41113 41191 . - . ID=id-AFQR01000036.1:41113..41191;Note=superfamily%3B label: Transglut_core superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 41134 41170 . - . ID=id-AFQR01000036.1:41134..41170;Note=superfamily:SSF54001~cysteine proteinases;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42085 42091 . + . ID=id-AFQR01000036.1:42085..42091;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 42180 42458 . + . ID=gene-GGE_1868;Name=GGE_1868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank CDS 42180 42458 . + 0 ID=cds-EGT79685.1;Parent=gene-GGE_1868;Dbxref=InterPro:IPR006121,PFAM:PF00403,NCBI_GP:EGT79685.1;Name=EGT79685.1;Note=HI_1050;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||;go_process=metal ion transport|0030001||;locus_tag=GGE_1868;product=putative heavy metal transport/detoxification protein;protein_id=EGT79685.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42222 42414 . + . ID=id-GGE_1868;Note=HMMPanther:PTHR22814:SF62~os01g0595100 protein~HMMPanther:PTHR22814~family not named;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42243 42393 . + . ID=id-GGE_1868-2;Note=Gene3D:3.30.70.100;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42246 42393 . + . ID=id-GGE_1868-3;Dbxref=InterPro:IPR006121;Note=superfamily:SSF55008~hma%2C heavy metal-associated domain~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42255 42378 . + . ID=id-GGE_1868-4;Dbxref=InterPro:IPR006121;Note=ProfileScan:PS50846~hma_2~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42261 42369 . + . ID=id-GGE_1868-5;Note=specific~superfamily%3B label: HMA;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42261 42360 . + . ID=id-GGE_1868-6;Dbxref=InterPro:IPR006121,PFAM:PF00403;Note=hma~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_1868 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 42469 42493 . - . ID=id-AFQR01000036.1:42469..42493;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43027 43036 . + . ID=id-AFQR01000036.1:43027..43036;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43045 43054 . - . ID=id-AFQR01000036.1:43045..43054;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 43074 43646 . - . ID=gene-GGE_1869;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank CDS 43074 43646 . - 0 ID=cds-EGT79686.1;Parent=gene-GGE_1869;Dbxref=InterPro:IPR001424,InterPro:IPR018152,PFAM:PF00080,NCBI_GP:EGT79686.1;Name=EGT79686.1;Ontology_term=GO:0055114,GO:0006801,GO:0046872;gbkey=CDS;gene=sodC;go_function=metal ion binding|0046872||;go_process=oxidation-reduction process|0055114||,superoxide metabolic process|0006801||;locus_tag=GGE_1869;product=Superoxide dismutase Cu-Zn;protein_id=EGT79686.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43182 43539 . - . ID=id-GGE_1869;Dbxref=InterPro:IPR001424;Note=superfamily:SSF49329~cu%2Czn superoxide dismutase-like~superoxide dismutase%2C copper/zinc binding;gbkey=misc_feature;gene=sodC;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43191 43530 . - . ID=id-GGE_1869-2;Dbxref=InterPro:IPR001424;Note=Gene3D:2.60.40.200~superoxide dismutase%2C copper/zinc binding;gbkey=misc_feature;gene=sodC;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43221 43500 . - . ID=id-GGE_1869-3;Note=specific~superfamily%3B label: Cu-Zn_Superoxide_Dismutase;gbkey=misc_feature;gene=sodC;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43224 43494 . - . ID=id-GGE_1869-4;Dbxref=InterPro:IPR001424,PFAM:PF00080;Note=sod_cu~superoxide dismutase%2C copper/zinc binding;gbkey=misc_feature;gene=sodC;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43236 43482 . - . ID=id-GGE_1869-5;Note=HMMPanther:PTHR10003~superoxide dismutase [cu-zn]-related;gbkey=misc_feature;gene=sodC;locus_tag=GGE_1869 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43107 43317 . + . ID=id-AFQR01000036.1:43107..43317;Dbxref=InterPro:IPR018152;Note=PatternScan:PS00087~sod_cu_zn_1~superoxide dismutase%2C copper/zinc%2C binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43110 43608 . + . ID=id-AFQR01000036.1:43110..43608;Dbxref=InterPro:IPR018152;Note=PatternScan:PS00332~sod_cu_zn_2~superoxide dismutase%2C copper/zinc%2C binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 43734 44090 . - . ID=gene-GGE_1870;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank CDS 43734 44090 . - 0 ID=cds-EGT79687.1;Parent=gene-GGE_1870;Dbxref=GeneID:1176105,InterPro:IPR006156,InterPro:IPR006157,PFAM:PF02152,TIGRFAM:TIGR00525,TIGRFAM:TIGR00526,NCBI_GP:EGT79687.1;Name=EGT79687.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||;go_process=folic acid-containing compound metabolic process|0006760||;locus_tag=GGE_1870;product=Dihydroneopterin aldolase;protein_id=EGT79687.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43734 44088 . - . ID=id-GGE_1870;Dbxref=InterPro:IPR006157,TIGRFAM:TIGR00526;Note=folb_dom: folb domain~dihydroneopterin aldolase/epimerase domain;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43734 44082 . - . ID=id-GGE_1870-2;Note=superfamily:SSF55620~tetrahydrobiopterin biosynthesis enzyme-like;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43734 44079 . - . ID=id-GGE_1870-3;Note=specific~superfamily~Gene3D:3.30.1130.10%3B label: DHNA_DHNTPE;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43734 44076 . - . ID=id-GGE_1870-4;Dbxref=InterPro:IPR006156;Note=HMMPanther:PTHR20941:SF3~dihydroneopterin aldolase~dihydroneopterin aldolase~HMMPanther:PTHR20941~family not named;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43740 44073 . - . ID=id-GGE_1870-5;Dbxref=InterPro:IPR006156,TIGRFAM:TIGR00525;Note=folb: dihydroneopterin aldolase~dihydroneopterin aldolase;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 43746 44067 . - . ID=id-GGE_1870-6;Dbxref=InterPro:IPR006157,PFAM:PF02152;Note=folb~dihydroneopterin aldolase/epimerase domain;gbkey=misc_feature;gene=folB;locus_tag=GGE_1870 GCA_000222085.2|AFQR01000036.1 Genbank gene 44173 44772 . + . ID=gene-GGE_1871;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank CDS 44173 44772 . + 0 ID=cds-EGT79688.1;Parent=gene-GGE_1871;Dbxref=GeneID:1176107,InterPro:IPR003811,PFAM:PF02660,TIGRFAM:TIGR00023,NCBI_GP:EGT79688.1;Name=EGT79688.1;Ontology_term=GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||;locus_tag=GGE_1871;product=Glycerol-3-phosphate acyltransferase;protein_id=EGT79688.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44173 44761 . + . ID=id-GGE_1871;Note=superfamily%3B label: DUF205 superfamily;gbkey=misc_feature;gene=plsY;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44173 44758 . + . ID=id-GGE_1871-2;Dbxref=InterPro:IPR003811,TIGRFAM:TIGR00023;Note=tigr00023: acyl-phosphate glycerol 3-phosph~glycerol-3-phosphate acyltransferase%2C bacteria;gbkey=misc_feature;gene=plsY;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44179 44242 . + . ID=id-GGE_1871-3;Note=transmembrane_regions;gbkey=misc_feature;gene=plsY;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44194 44734 . + . ID=id-GGE_1871-4;Dbxref=InterPro:IPR003811;Note=HAMAP:MF_01043~plsy~glycerol-3-phosphate acyltransferase%2C bacteria;gbkey=misc_feature;gene=plsY;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44203 44698 . + . ID=id-GGE_1871-5;Dbxref=InterPro:IPR003811,PFAM:PF02660;Note=duf205~glycerol-3-phosphate acyltransferase%2C bacteria;gbkey=misc_feature;gene=plsY;locus_tag=GGE_1871 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44206 44215 . - . ID=id-AFQR01000036.1:44206..44215;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44209 44593 . - . ID=id-AFQR01000036.1:44209..44593;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44233 44422 . - . ID=id-AFQR01000036.1:44233..44422;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44242 44581 . - . ID=id-AFQR01000036.1:44242..44581;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44242 44509 . - . ID=id-AFQR01000036.1:44242..44509;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44242 44341 . - . ID=id-AFQR01000036.1:44242..44341;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44779 44788 . - . ID=id-AFQR01000036.1:44779..44788;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 44814 46517 . + . ID=gene-GGE_1872;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=GGE_1872 GCA_000222085.2|AFQR01000036.1 Genbank CDS 44814 46517 . + 0 ID=cds-EGT79689.1;Parent=gene-GGE_1872;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR005467,InterPro:IPR011712,InterPro:IPR016380,PFAM:PF00672,PFAM:PF02518,PFAM:PF07730,PIR:PIRSF003167,NCBI_GP:EGT79689.1;Name=EGT79689.1;Ontology_term=GO:0018106,GO:0007165,GO:0000160,GO:0016021,GO:0005524,GO:0046983,GO:0004673,GO:0004871,GO:0000155;gbkey=CDS;gene=narQ;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,protein dimerization activity|0046983||,protein histidine kinase activity|0004673||,signal transducer activity|0004871||,two-component sensor activity|0000155||;go_process=peptidyl-histidine phosphorylation|0018106||,signal transduction|0007165||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_1872;product=Sensor protein narQ;protein_id=EGT79689.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44814 46512 . + . ID=id-GGE_1872;Dbxref=InterPro:IPR016380,PIR:PIRSF003167;Note=signal transduction histidine kinase%2C nitrate/nitrite-sensing~signal transduction histidine kinase%2C nitrate/nitrite-sensing;gbkey=misc_feature;gene=narQ;locus_tag=GGE_1872 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44823 46506 . + . ID=id-GGE_1872-2;Note=multi-dom%3B label: PRK10935;gbkey=misc_feature;gene=narQ;locus_tag=GGE_1872 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44829 46491 . + . ID=id-GGE_1872-3;Note=HMMPanther:PTHR24423:SF295~subfamily not named~HMMPanther:PTHR24423~family not named;gbkey=misc_feature;gene=narQ;locus_tag=GGE_1872 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44844 44883 . + . ID=id-GGE_1872-4;Note=transmembrane_regions;gbkey=misc_feature;gene=narQ;locus_tag=GGE_1872 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44844 45879 . - . ID=id-AFQR01000036.1:44844..45879;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44850 46203 . - . ID=id-AFQR01000036.1:44850..46203;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44880 46074 . - . ID=id-AFQR01000036.1:44880..46074;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44880 45495 . - . ID=id-AFQR01000036.1:44880..45495;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44883 45264 . - . ID=id-AFQR01000036.1:44883..45264;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 44976 45339 . - . ID=id-AFQR01000036.1:44976..45339;Dbxref=InterPro:IPR003660;Note=ProfileScan:PS50885~hamp~hamp linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45015 45909 . - . ID=id-AFQR01000036.1:45015..45909;Note=superfamily%3B label: HisKA_3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45018 45282 . - . ID=id-AFQR01000036.1:45018..45282;Dbxref=InterPro:IPR003660,PFAM:PF00672;Note=hamp~hamp linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45021 45906 . - . ID=id-AFQR01000036.1:45021..45906;Dbxref=InterPro:IPR011712,PFAM:PF07730;Note=hiska_3~signal transduction histidine kinase%2C subgroup 3%2C dimerization and phosphoacceptor domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45021 45279 . - . ID=id-AFQR01000036.1:45021..45279;Note=superfamily%3B label: HAMP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45066 46251 . - . ID=id-AFQR01000036.1:45066..46251;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45081 46242 . - . ID=id-AFQR01000036.1:45081..46242;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45192 46131 . - . ID=id-AFQR01000036.1:45192..46131;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45207 46116 . - . ID=id-AFQR01000036.1:45207..46116;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 45414 45915 . - . ID=id-AFQR01000036.1:45414..45915;Dbxref=InterPro:IPR005467;Note=ProfileScan:PS50109~his_kin~signal transduction histidine kinase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 46593 47618 . + . ID=gene-GGE_1873;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank CDS 46593 47618 . + 0 ID=cds-EGT79690.1;Parent=gene-GGE_1873;Dbxref=GeneID:1171070,InterPro:IPR003170,InterPro:IPR006094,InterPro:IPR011601,InterPro:IPR016166,InterPro:IPR016167,InterPro:IPR016169,PFAM:PF01565,PFAM:PF02873,TIGRFAM:TIGR00179,NCBI_GP:EGT79690.1;Name=EGT79690.1;Ontology_term=GO:0055114,GO:0008762,GO:0003824,GO:0050660,GO:0016491;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||,catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1873;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=EGT79690.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46593 47616 . + . ID=id-GGE_1873;Dbxref=InterPro:IPR003170;Note=HAMAP:MF_00037~murb~udp-n-acetylenolpyruvoylglucosamine reductase;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46593 47577 . + . ID=id-GGE_1873-2;Note=multi-dom%3B label: murB;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46602 47187 . + . ID=id-GGE_1873-3;Dbxref=InterPro:IPR016166;Note=superfamily:SSF56176~fad-binding domain~fad-binding%2C type 2;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46602 46785 . + . ID=id-GGE_1873-4;Dbxref=InterPro:IPR016167;Note=Gene3D:3.30.43.10~fad-binding%2C type 2%2C subdomain 1;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46605 47586 . + . ID=id-GGE_1873-5;Dbxref=InterPro:IPR003170;Note=HMMPanther:PTHR21071~family not named~udp-n-acetylenolpyruvoylglucosamine reductase;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46605 47571 . + . ID=id-GGE_1873-6;Dbxref=InterPro:IPR003170,TIGRFAM:TIGR00179;Note=murb: udp-n-acetylenolpyruvoylglucosamine re~udp-n-acetylenolpyruvoylglucosamine reductase;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46629 47106 . + . ID=id-GGE_1873-7;Dbxref=InterPro:IPR016166;Note=ProfileScan:PS51387~fad_pcmh~fad-binding%2C type 2;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46650 46956 . + . ID=id-GGE_1873-8;Dbxref=InterPro:IPR006094,PFAM:PF01565;Note=superfamily~fad_binding_4~fad linked oxidase%3B label: FAD_binding_4 superfamily;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46803 47070 . + . ID=id-GGE_1873-9;Dbxref=InterPro:IPR016169;Note=Gene3D:3.30.465.10~co dehydrogenase flavolike protein%2C fad-binding%2C subdomain 2;gbkey=misc_feature;gene=murB;locus_tag=GGE_1873 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46929 47280 . - . ID=id-AFQR01000036.1:46929..47280;Dbxref=InterPro:IPR011601;Note=Gene3D:3.90.78.10~udp-n-acetylenolpyruvoylglucosamine reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 46974 47202 . - . ID=id-AFQR01000036.1:46974..47202;Dbxref=InterPro:IPR011601,PFAM:PF02873;Note=superfamily~murb_c~udp-n-acetylenolpyruvoylglucosamine reductase%3B label: MurB_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 47019 47193 . - . ID=id-AFQR01000036.1:47019..47193;Dbxref=InterPro:IPR011601;Note=superfamily:SSF56194~uridine diphospho-n-acetylenolpyruvylglucosamine reductase%2C murb domain~udp-n-acetylenolpyruvoylglucosamine reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 47644 47955 . + . ID=gene-GGE_1874;Name=GGE_1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1874 GCA_000222085.2|AFQR01000036.1 Genbank CDS 47644 47955 . + 0 ID=cds-EGT79691.1;Parent=gene-GGE_1874;Dbxref=GeneID:145628598,InterPro:IPR016755,PFAM:PF10084,PIR:PIRSF019302,NCBI_GP:EGT79691.1;Name=EGT79691.1;Note=ZP_01784398;gbkey=CDS;locus_tag=GGE_1874;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=EGT79691.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 47644 47953 . + . ID=id-GGE_1874;Dbxref=InterPro:IPR016755,PIR:PIRSF019302;Note=uncharacterised conserved protein%2C ucp019302 type~uncharacterised conserved protein ucp019302;gbkey=misc_feature;locus_tag=GGE_1874 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 47653 47944 . + . ID=id-GGE_1874-2;Note=superfamily%3B label: DUF2322 superfamily;gbkey=misc_feature;locus_tag=GGE_1874 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 47653 47935 . + . ID=id-GGE_1874-3;Dbxref=InterPro:IPR016755,PFAM:PF10084;Note=duf2322~uncharacterised conserved protein ucp019302;gbkey=misc_feature;locus_tag=GGE_1874 GCA_000222085.2|AFQR01000036.1 Genbank gene 48093 48938 . + . ID=gene-GGE_1875;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank CDS 48093 48938 . + 0 ID=cds-EGT79692.1;Parent=gene-GGE_1875;Dbxref=GeneID:1173123,InterPro:IPR000943,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR009042,InterPro:IPR011991,InterPro:IPR012759,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,PFAM:PF00140,PFAM:PF04542,PFAM:PF04545,TIGRFAM:TIGR02392,TIGRFAM:TIGR02937,NCBI_GP:EGT79692.1;Name=EGT79692.1;Ontology_term=GO:0006355,GO:0009408,GO:0006352,GO:0003677,GO:0003700,GO:0016987,GO:0008270;gbkey=CDS;gene=rpoH;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||,sigma factor activity|0016987||,zinc ion binding|0008270||;go_process=regulation of transcription DNA-dependent|0006355||,response to heat|0009408||,transcription initiation DNA-dependent|0006352||;locus_tag=GGE_1875;product=RNA polymerase sigma-32 factor;protein_id=EGT79692.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48093 48930 . + . ID=id-GGE_1875;Note=multi-dom%3B label: PRK06596;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48117 48438 . + . ID=id-GGE_1875-2;Dbxref=InterPro:IPR013325;Note=superfamily:SSF88946~sigma2 domain of rna polymerase sigma factors~rna polymerase sigma factor%2C region 2;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48132 48900 . + . ID=id-GGE_1875-3;Dbxref=InterPro:IPR012759,TIGRFAM:TIGR02392;Note=rpoh_proteo: alternative sigma factor rpo~rna polymerase sigma factor rpoh%2C proteobacteria;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48135 48405 . + . ID=id-GGE_1875-4;Note=Gene3D:1.10.601.10;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48234 48792 . + . ID=id-GGE_1875-5;Dbxref=InterPro:IPR014284,TIGRFAM:TIGR02937;Note=sigma70-ecf: rna polymerase sigma factor%2C~rna polymerase sigma-70;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48249 48306 . + . ID=id-GGE_1875-6;Note=superfamily%3B label: Sigma70_r2 superfamily;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48249 48303 . + . ID=id-GGE_1875-7;Dbxref=InterPro:IPR007627,PFAM:PF04542;Note=sigma70_r2~rna polymerase sigma-70 region 2;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48918 48927 . + . ID=id-GGE_1875-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rpoH;locus_tag=GGE_1875 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48129 48885 . - . ID=id-AFQR01000036.1:48129..48885;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48132 48783 . - . ID=id-AFQR01000036.1:48132..48783;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48135 48321 . - . ID=id-AFQR01000036.1:48135..48321;Dbxref=InterPro:IPR000943;Note=PatternScan:PS00715~sigma70_1~rna polymerase sigma-70 factor~FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48138 48702 . - . ID=id-AFQR01000036.1:48138..48702;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48141 48840 . - . ID=id-AFQR01000036.1:48141..48840;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48144 48162 . - . ID=id-AFQR01000036.1:48144..48162;Dbxref=InterPro:IPR009042,PFAM:PF00140;Note=sigma70_r1_2~rna polymerase sigma-70 region 1.2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48174 48840 . - . ID=id-AFQR01000036.1:48174..48840;Dbxref=InterPro:IPR000943;Note=PatternScan:PS00716~sigma70_2~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48246 48771 . - . ID=id-AFQR01000036.1:48246..48771;Dbxref=InterPro:IPR007630,PFAM:PF04545;Note=superfamily~sigma70_r4~rna polymerase sigma-70 region 4%3B label: Sigma70_r4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48270 48756 . - . ID=id-AFQR01000036.1:48270..48756;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48369 48657 . - . ID=id-AFQR01000036.1:48369..48657;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma3 and sigma4 domains of rna polymerase sigma factors~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 48991 49356 . - . ID=gene-GGE_1876;Name=GGE_1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank CDS 48991 49356 . - 0 ID=cds-EGT79693.1;Parent=gene-GGE_1876;Dbxref=GeneID:113460765,InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT79693.1;Name=EGT79693.1;Note=YP_718832;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1876;product=transcriptional regulator;protein_id=EGT79693.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48991 49189 . - . ID=id-GGE_1876;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 48991 49186 . - . ID=id-GGE_1876-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49009 49120 . - . ID=id-GGE_1876-3;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49012 49156 . - . ID=id-GGE_1876-4;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49012 49153 . - . ID=id-GGE_1876-5;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1876 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49027 49138 . + . ID=id-AFQR01000036.1:49027..49138;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49099 49249 . + . ID=id-AFQR01000036.1:49099..49249;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49150 49189 . + . ID=id-AFQR01000036.1:49150..49189;Note=BlastProDom:PD740661~q5f8b9_neig1_q5f8b9;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 49483 50052 . + . ID=gene-GGE_1877;Name=GGE_1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1877 GCA_000222085.2|AFQR01000036.1 Genbank CDS 49483 50052 . + 0 ID=cds-EGT79694.1;Parent=gene-GGE_1877;Dbxref=GeneID:307245357,NCBI_GP:EGT79694.1;Name=EGT79694.1;Note=ZP_07527445;gbkey=CDS;locus_tag=GGE_1877;product=integron protein cassette protein;protein_id=EGT79694.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49483 49540 . + . ID=id-GGE_1877;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1877 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49495 49543 . + . ID=id-GGE_1877-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1877 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 49495 49522 . + . ID=id-GGE_1877-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1877 GCA_000222085.2|AFQR01000036.1 Genbank gene 50095 51030 . - . ID=gene-GGE_1878;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank CDS 50095 51030 . - 0 ID=cds-EGT79695.1;Parent=gene-GGE_1878;Dbxref=GeneID:1176627,InterPro:IPR001269,InterPro:IPR013785,InterPro:IPR018517,PFAM:PF01207,PIR:PIRSF006621,NCBI_GP:EGT79695.1;Name=EGT79695.1;Ontology_term=GO:0008152,GO:0055114,GO:0008033,GO:0003824,GO:0050660,GO:0017150;gbkey=CDS;gene=dusC;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,tRNA dihydrouridine synthase activity|0017150||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,tRNA processing|0008033||;locus_tag=GGE_1878;product=tRNA-dihydrouridine synthase C;protein_id=EGT79695.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50095 51028 . - . ID=id-GGE_1878;Note=superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50101 51022 . - . ID=id-GGE_1878-2;Dbxref=InterPro:IPR001269,PIR:PIRSF006621;Note=trna-dihydrouridine synthase~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50101 51016 . - . ID=id-GGE_1878-3;Dbxref=InterPro:IPR001269;Note=HMMPanther:PTHR11082:SF9~trna-dihydrouridine synthase-related~HMMPanther:PTHR11082~family not named~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50101 50821 . - . ID=id-GGE_1878-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50101 50791 . - . ID=id-GGE_1878-5;Note=specific~superfamily%3B label: DUS_like_FMN;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50107 50998 . - . ID=id-GGE_1878-6;Note=multi-dom%3B label: Dus;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50107 50995 . - . ID=id-GGE_1878-7;Dbxref=InterPro:IPR001269,PFAM:PF01207;Note=dus~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50606 50615 . - . ID=id-GGE_1878-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dusC;locus_tag=GGE_1878 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 50152 50371 . + . ID=id-AFQR01000036.1:50152..50371;Dbxref=InterPro:IPR018517;Note=PatternScan:PS01136~upf0034~trna-dihydrouridine synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 51030 51896 . - . ID=gene-GGE_1879;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank CDS 51030 51896 . - 0 ID=cds-EGT79696.1;Parent=gene-GGE_1879;Dbxref=GeneID:1175487,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR007791,PFAM:PF00226,PFAM:PF05099,NCBI_GP:EGT79696.1;Name=EGT79696.1;Ontology_term=GO:0006457,GO:0031072,GO:0051082;gbkey=CDS;gene=djlA;go_function=heat shock protein binding|0031072||,unfolded protein binding|0051082||;go_process=protein folding|0006457||;locus_tag=GGE_1879;product=DnaJ-like protein djlA;protein_id=EGT79696.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51030 51894 . - . ID=id-GGE_1879;Note=multi-dom~HAMAP:MF_01153~djla%3B label: djlA;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51045 51597 . - . ID=id-GGE_1879-2;Note=Gene3D:1.10.3680.10;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51051 51099 . - . ID=id-GGE_1879-3;Note=transmembrane_regions;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51159 51426 . - . ID=id-GGE_1879-4;Dbxref=InterPro:IPR007791,PFAM:PF05099;Note=terb~heat shock protein dnaj-like protein djla;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51210 51348 . - . ID=id-GGE_1879-5;Note=specific~superfamily%3B label: terB_like superfamily;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51429 51483 . - . ID=id-GGE_1879-6;Dbxref=InterPro:IPR001623;Note=superfamily:SSF46565~chaperone j-domain~heat shock protein dnaj;gbkey=misc_feature;gene=djlA;locus_tag=GGE_1879 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51060 51159 . + . ID=id-AFQR01000036.1:51060..51159;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51078 51756 . + . ID=id-AFQR01000036.1:51078..51756;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51087 51702 . + . ID=id-AFQR01000036.1:51087..51702;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51093 51828 . + . ID=id-AFQR01000036.1:51093..51828;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51114 51588 . + . ID=id-AFQR01000036.1:51114..51588;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51204 51696 . + . ID=id-AFQR01000036.1:51204..51696;Note=specific~superfamily%3B label: DnaJ;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51210 51696 . + . ID=id-AFQR01000036.1:51210..51696;Note=HMMPanther:PTHR24077:SF69~subfamily not named~HMMPanther:PTHR24077~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51216 51696 . + . ID=id-AFQR01000036.1:51216..51696;Dbxref=InterPro:IPR001623,PFAM:PF00226;Note=dnaj~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51222 51693 . + . ID=id-AFQR01000036.1:51222..51693;Dbxref=InterPro:IPR001623;Note=Gene3D:1.10.287.110~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51231 51696 . + . ID=id-AFQR01000036.1:51231..51696;Dbxref=InterPro:IPR001623;Note=ProfileScan:PS50076~dnaj_2~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51914 51923 . + . ID=id-AFQR01000036.1:51914..51923;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 51975 52616 . - . ID=gene-GGE_1880;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=GGE_1880 GCA_000222085.2|AFQR01000036.1 Genbank CDS 51975 52616 . - 0 ID=cds-EGT79697.1;Parent=gene-GGE_1880;Dbxref=GeneID:1172789,InterPro:IPR000836,InterPro:IPR004467,InterPro:IPR023031,PFAM:PF00156,TIGRFAM:TIGR00336,NCBI_GP:EGT79697.1;Name=EGT79697.1;Ontology_term=GO:0009116,GO:0006221,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||;go_process=nucleoside metabolic process|0009116||,pyrimidine nucleotide biosynthetic process|0006221||;locus_tag=GGE_1880;product=Orotate phosphoribosyltransferase;protein_id=EGT79697.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51975 52614 . - . ID=id-GGE_1880;Dbxref=InterPro:IPR023031;Note=superfamily~HMMPanther:PTHR19278:SF30~subfamily not named~HMMPanther:PTHR19278~family not named~HAMAP:MF_01208~pyre~orotate phosphoribosyltransferase~superfamily:SSF53271~prtase-like%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=pyrE;locus_tag=GGE_1880 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 51981 52608 . - . ID=id-GGE_1880-2;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=pyrE;locus_tag=GGE_1880 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52005 52509 . - . ID=id-GGE_1880-3;Dbxref=InterPro:IPR004467,TIGRFAM:TIGR00336;Note=pyre: orotate phosphoribosyltransferase~orotate phosphoribosyl transferase%2C clade 1;gbkey=misc_feature;gene=pyrE;locus_tag=GGE_1880 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52092 52317 . - . ID=id-GGE_1880-4;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=pyrE;locus_tag=GGE_1880 GCA_000222085.2|AFQR01000036.1 Genbank gene 52640 53356 . - . ID=gene-GGE_1881;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank CDS 52640 53356 . - 0 ID=cds-EGT79698.1;Parent=gene-GGE_1881;Dbxref=GeneID:1173102,InterPro:IPR001247,InterPro:IPR002381,InterPro:IPR015847,InterPro:IPR018336,InterPro:IPR020568,PFAM:PF01138,PFAM:PF03725,TIGRFAM:TIGR01966,NCBI_GP:EGT79698.1;Name=EGT79698.1;Ontology_term=GO:0006396,GO:0008033,GO:0000175,GO:0003723,GO:0000049,GO:0004549;gbkey=CDS;gene=rph;go_function=3'-5'-exoribonuclease activity|0000175||,RNA binding|0003723||,tRNA binding|0000049||,tRNA-specific ribonuclease activity|0004549||;go_process=RNA processing|0006396||,tRNA processing|0008033||;locus_tag=GGE_1881;product=Ribonuclease PH;protein_id=EGT79698.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52640 53351 . - . ID=id-GGE_1881;Dbxref=InterPro:IPR002381;Note=HAMAP:MF_00564~rnase_ph~ribonuclease phosphorolytic%2C bacterial-type;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52640 53126 . - . ID=id-GGE_1881-2;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52646 53348 . - . ID=id-GGE_1881-3;Dbxref=InterPro:IPR002381,TIGRFAM:TIGR01966;Note=rnaseph: ribonuclease ph~ribonuclease phosphorolytic%2C bacterial-type;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52646 52676 . - . ID=id-GGE_1881-4;Note=seg;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52658 53333 . - . ID=id-GGE_1881-5;Note=HMMPanther:PTHR11953~family not named;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52676 53027 . - . ID=id-GGE_1881-6;Dbxref=InterPro:IPR001247,PFAM:PF01138;Note=rnase_ph~exoribonuclease%2C phosphorolytic domain 1;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52682 53312 . - . ID=id-GGE_1881-7;Note=multi-dom%3B label: rph;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52682 53021 . - . ID=id-GGE_1881-8;Note=superfamily%3B label: RNase_PH superfamily;gbkey=misc_feature;gene=rph;locus_tag=GGE_1881 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52679 52988 . + . ID=id-AFQR01000036.1:52679..52988;Dbxref=InterPro:IPR018336;Note=PatternScan:PS01277~ribonuclease_ph~ribonuclease ph%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52844 53111 . + . ID=id-AFQR01000036.1:52844..53111;Dbxref=InterPro:IPR015847,PFAM:PF03725;Note=superfamily~rnase_ph_c~exoribonuclease%2C phosphorolytic domain 2%3B label: RNase_PH_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 52895 53096 . + . ID=id-AFQR01000036.1:52895..53096;Dbxref=InterPro:IPR015847;Note=superfamily:SSF55666~ribonuclease ph domain 2-like~exoribonuclease%2C phosphorolytic domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 53427 55169 . - . ID=gene-GGE_1882;Name=GGE_1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1882 GCA_000222085.2|AFQR01000036.1 Genbank CDS 53427 55169 . - 0 ID=cds-EGT79699.1;Parent=gene-GGE_1882;Dbxref=GeneID:325579214,InterPro:IPR001902,InterPro:IPR002645,InterPro:IPR011547,PFAM:PF00916,PFAM:PF01740,TIGRFAM:TIGR00815,NCBI_GP:EGT79699.1;Name=EGT79699.1;Note=ZP_08149170;Ontology_term=GO:0008272,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0008271,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=secondary active sulfate transmembrane transporter activity|0008271||,transporter activity|0005215||;go_process=sulfate transport|0008272||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1882;product=SulP family sulfate permease;protein_id=EGT79699.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53451 55137 . - . ID=id-GGE_1882;Note=multi-dom%3B label: PRK11660;gbkey=misc_feature;locus_tag=GGE_1882 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53490 55071 . - . ID=id-GGE_1882-2;Dbxref=InterPro:IPR001902,TIGRFAM:TIGR00815;Note=sulp: sulfate permease~sulphate anion transporter;gbkey=misc_feature;locus_tag=GGE_1882 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53529 54969 . - . ID=id-GGE_1882-3;Note=HMMPanther:PTHR11814:SF52~putative sulfate transporter ychm~HMMPanther:PTHR11814~family not named;gbkey=misc_feature;locus_tag=GGE_1882 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53799 54285 . - . ID=id-GGE_1882-4;Dbxref=InterPro:IPR011547,PFAM:PF00916;Note=superfamily~sulfate_transp~sulphate transporter%3B label: Xan_ur_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1882 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53451 54012 . + . ID=id-AFQR01000036.1:53451..54012;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53457 53862 . + . ID=id-AFQR01000036.1:53457..53862;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53463 54441 . + . ID=id-AFQR01000036.1:53463..54441;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53472 54858 . + . ID=id-AFQR01000036.1:53472..54858;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53487 54573 . + . ID=id-AFQR01000036.1:53487..54573;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53487 53625 . + . ID=id-AFQR01000036.1:53487..53625;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 54486 . + . ID=id-AFQR01000036.1:53496..54486;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 54390 . + . ID=id-AFQR01000036.1:53496..54390;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 54285 . + . ID=id-AFQR01000036.1:53496..54285;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 54048 . + . ID=id-AFQR01000036.1:53496..54048;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 53961 . + . ID=id-AFQR01000036.1:53496..53961;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 53823 . + . ID=id-AFQR01000036.1:53496..53823;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 53742 . + . ID=id-AFQR01000036.1:53496..53742;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53496 53544 . + . ID=id-AFQR01000036.1:53496..53544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53505 54528 . + . ID=id-AFQR01000036.1:53505..54528;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53523 54675 . + . ID=id-AFQR01000036.1:53523..54675;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53697 54819 . + . ID=id-AFQR01000036.1:53697..54819;Dbxref=InterPro:IPR002645;Note=Gene3D:3.30.750.24~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53736 54819 . + . ID=id-AFQR01000036.1:53736..54819;Dbxref=InterPro:IPR002645,PFAM:PF01740;Note=stas~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53748 54804 . + . ID=id-AFQR01000036.1:53748..54804;Note=specific~superfamily%3B label: STAS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53772 54801 . + . ID=id-AFQR01000036.1:53772..54801;Dbxref=InterPro:IPR002645;Note=ProfileScan:PS50801~stas~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 53784 54798 . + . ID=id-AFQR01000036.1:53784..54798;Dbxref=InterPro:IPR002645;Note=superfamily:SSF52091~anti-sigma factor antagonist spoiiaa~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 55566 56789 . + . ID=gene-GGE_1883;Name=GGE_1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank CDS 55566 56789 . + 0 ID=cds-EGT79700.1;Parent=gene-GGE_1883;Dbxref=GeneID:7388456,InterPro:IPR004746,InterPro:IPR005829,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00895,NCBI_GP:EGT79700.1;Name=EGT79700.1;Note=HI_1104;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1883;product=Putative metabolite transport protein;protein_id=EGT79700.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55566 56787 . + . ID=id-GGE_1883;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55566 56679 . + . ID=id-GGE_1883-2;Dbxref=InterPro:IPR004746,TIGRFAM:TIGR00895;Note=2a0115: mfs transporter%2C aromatic acid:h+ sy~benzoate transport;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55566 56631 . + . ID=id-GGE_1883-3;Note=multi-dom%3B label: 2A0115;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55590 56085 . + . ID=id-GGE_1883-4;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55596 56745 . + . ID=id-GGE_1883-5;Note=HMMPanther:PTHR24003~family not named;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55602 56739 . + . ID=id-GGE_1883-6;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55605 56724 . + . ID=id-GGE_1883-7;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55605 55635 . + . ID=id-GGE_1883-8;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55620 56355 . + . ID=id-GGE_1883-9;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;locus_tag=GGE_1883 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55605 55890 . - . ID=id-AFQR01000036.1:55605..55890;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55611 56004 . - . ID=id-AFQR01000036.1:55611..56004;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55620 56634 . - . ID=id-AFQR01000036.1:55620..56634;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55626 56631 . - . ID=id-AFQR01000036.1:55626..56631;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55626 56433 . - . ID=id-AFQR01000036.1:55626..56433;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55626 56052 . - . ID=id-AFQR01000036.1:55626..56052;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55626 55716 . - . ID=id-AFQR01000036.1:55626..55716;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 56703 . - . ID=id-AFQR01000036.1:55635..56703;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 56505 . - . ID=id-AFQR01000036.1:55635..56505;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 56346 . - . ID=id-AFQR01000036.1:55635..56346;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 56235 . - . ID=id-AFQR01000036.1:55635..56235;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 55974 . - . ID=id-AFQR01000036.1:55635..55974;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 55872 . - . ID=id-AFQR01000036.1:55635..55872;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55635 55794 . - . ID=id-AFQR01000036.1:55635..55794;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 55644 55890 . - . ID=id-AFQR01000036.1:55644..55890;Dbxref=InterPro:IPR005829;Note=PatternScan:PS00217~sugar_transport_2~sugar transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56112 56229 . - . ID=id-AFQR01000036.1:56112..56229;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56150 56159 . - . ID=id-AFQR01000036.1:56150..56159;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 56833 57789 . - . ID=gene-GGE_1884;Name=GGE_1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank CDS 56833 57789 . - 0 ID=cds-EGT79701.1;Parent=gene-GGE_1884;Dbxref=GeneID:301155026,InterPro:IPR002201,InterPro:IPR011908,PFAM:PF01075,TIGRFAM:TIGR02193,NCBI_GP:EGT79701.1;Name=EGT79701.1;Note=CBW14489;Ontology_term=GO:0009103,GO:0008152,GO:0016757,GO:0016740;gbkey=CDS;go_function=transferase activity transferring glycosyl groups|0016757||,transferase activity|0016740||;go_process=lipopolysaccharide biosynthetic process|0009103||,metabolic process|0008152||;locus_tag=GGE_1884;product=ADP-heptose:LPS heptosyl transferase I;protein_id=EGT79701.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56833 57787 . - . ID=id-GGE_1884;Note=multi-dom~superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase%3B label: RfaF;gbkey=misc_feature;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56833 57304 . - . ID=id-GGE_1884-2;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56839 57781 . - . ID=id-GGE_1884-3;Dbxref=InterPro:IPR011908,TIGRFAM:TIGR02193;Note=heptsyl_trn_i: lipopolysaccharide hepto~lipopolysaccharide heptosyltransferase i;gbkey=misc_feature;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 56839 57769 . - . ID=id-GGE_1884-4;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57076 57508 . - . ID=id-GGE_1884-5;Dbxref=InterPro:IPR002201,PFAM:PF01075;Note=glyco_transf_9~glycosyl transferase%2C family 9;gbkey=misc_feature;locus_tag=GGE_1884 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57167 57176 . + . ID=id-AFQR01000036.1:57167..57176;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57265 57343 . + . ID=id-AFQR01000036.1:57265..57343;Note=Gene3D:3.40.50.2000;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57547 57556 . + . ID=id-AFQR01000036.1:57547..57556;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 57786 58691 . - . ID=gene-GGE_1885;Name=GGE_1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1885 GCA_000222085.2|AFQR01000036.1 Genbank CDS 57786 58691 . - 0 ID=cds-EGT79702.1;Parent=gene-GGE_1885;Dbxref=GeneID:325577197,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT79702.1;Name=EGT79702.1;Note=ZP_08147681;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1885;product=putative multidrug resistance efflux transporter EmrE;protein_id=EGT79702.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57807 57840 . - . ID=id-GGE_1885;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1885 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57831 58170 . - . ID=id-GGE_1885-2;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=superfamily~eama~drug/metabolite transporter%3B label: EamA superfamily;gbkey=misc_feature;locus_tag=GGE_1885 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57858 58545 . - . ID=id-GGE_1885-3;Note=multi-dom%3B label: 2A78;gbkey=misc_feature;locus_tag=GGE_1885 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57903 58116 . - . ID=id-GGE_1885-4;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_1885 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57828 58623 . + . ID=id-AFQR01000036.1:57828..58623;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57840 58623 . + . ID=id-AFQR01000036.1:57840..58623;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57840 58161 . + . ID=id-AFQR01000036.1:57840..58161;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 58527 . + . ID=id-AFQR01000036.1:57855..58527;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 58440 . + . ID=id-AFQR01000036.1:57855..58440;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 58329 . + . ID=id-AFQR01000036.1:57855..58329;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 58242 . + . ID=id-AFQR01000036.1:57855..58242;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 58074 . + . ID=id-AFQR01000036.1:57855..58074;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 57993 . + . ID=id-AFQR01000036.1:57855..57993;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 57855 57888 . + . ID=id-AFQR01000036.1:57855..57888;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 58116 58353 . + . ID=id-AFQR01000036.1:58116..58353;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 58128 58281 . + . ID=id-AFQR01000036.1:58128..58281;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 58170 58281 . + . ID=id-AFQR01000036.1:58170..58281;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59042 59105 . + . ID=id-AFQR01000036.1:59042..59105;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59057 59201 . + . ID=id-AFQR01000036.1:59057..59201;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 59320 60363 . - . ID=gene-GGE_1886;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank CDS 59320 60363 . - 0 ID=cds-EGT79703.1;Parent=gene-GGE_1886;Dbxref=InterPro:IPR002201,InterPro:IPR011910,PFAM:PF01075,TIGRFAM:TIGR02195,NCBI_GP:EGT79703.1;Name=EGT79703.1;Ontology_term=GO:0009103,GO:0008152,GO:0016757,GO:0016740;gbkey=CDS;gene=rfaF;go_function=transferase activity transferring glycosyl groups|0016757||,transferase activity|0016740||;go_process=lipopolysaccharide biosynthetic process|0009103||,metabolic process|0008152||;locus_tag=GGE_1886;product=ADP-heptose--LPS heptosyltransferase 2;protein_id=EGT79703.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59320 60358 . - . ID=id-GGE_1886;Note=multi-dom~superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase%3B label: RfaF;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59320 59746 . - . ID=id-GGE_1886-2;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59326 60355 . - . ID=id-GGE_1886-3;Dbxref=InterPro:IPR011910,TIGRFAM:TIGR02195;Note=heptsyl_trn_ii: lipopolysaccharide hep~lipopolysaccharide heptosyltransferase ii;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59326 60346 . - . ID=id-GGE_1886-4;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59527 60073 . - . ID=id-GGE_1886-5;Dbxref=InterPro:IPR002201,PFAM:PF01075;Note=glyco_transf_9~glycosyl transferase%2C family 9;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59827 59854 . - . ID=id-GGE_1886-6;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=rfaF;locus_tag=GGE_1886 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59330 59339 . + . ID=id-AFQR01000036.1:59330..59339;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 59834 59843 . + . ID=id-AFQR01000036.1:59834..59843;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60380 60389 . + . ID=id-AFQR01000036.1:60380..60389;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 60439 61602 . - . ID=gene-GGE_1887;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=GGE_1887 GCA_000222085.2|AFQR01000036.1 Genbank CDS 60439 61602 . - 0 ID=cds-EGT79704.1;Parent=gene-GGE_1887;Dbxref=GeneID:1175042,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,PFAM:PF00165,NCBI_GP:EGT79704.1;Name=EGT79704.1;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0003677,GO:0005515,GO:0043565,GO:0003700;gbkey=CDS;gene=xylR;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,protein binding|0005515||,sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_1887;product=Xylose operon regulatory protein;protein_id=EGT79704.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60454 61339 . - . ID=id-GGE_1887;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=xylR;locus_tag=GGE_1887 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60460 61252 . - . ID=id-GGE_1887-2;Note=specific~superfamily%3B label: PBP1_XylR;gbkey=misc_feature;gene=xylR;locus_tag=GGE_1887 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60463 60766 . - . ID=id-GGE_1887-3;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=xylR;locus_tag=GGE_1887 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60790 60844 . - . ID=id-GGE_1887-4;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=xylR;locus_tag=GGE_1887 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60487 61498 . + . ID=id-AFQR01000036.1:60487..61498;Dbxref=InterPro:IPR020449;Note=FPrintScan:PR00032~htharac~transcription regulator hth%2C arac%2C bacterial type;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60490 61543 . + . ID=id-AFQR01000036.1:60490..61543;Dbxref=InterPro:IPR020449;Note=FPrintScan:PR00032~htharac~transcription regulator hth%2C arac%2C bacterial type;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60526 61342 . + . ID=id-AFQR01000036.1:60526..61342;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60553 61483 . + . ID=id-AFQR01000036.1:60553..61483;Note=superfamily%3B label: HTH_AraC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60556 61477 . + . ID=id-AFQR01000036.1:60556..61477;Dbxref=InterPro:IPR018060,PFAM:PF00165;Note=hth_arac~dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60565 61321 . + . ID=id-AFQR01000036.1:60565..61321;Dbxref=InterPro:IPR018060,PFAM:PF00165;Note=hth_arac~dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60568 61453 . + . ID=id-AFQR01000036.1:60568..61453;Dbxref=InterPro:IPR018062;Note=PatternScan:PS00041~hth_arac_family_1~helix-turn-helix%2C arac type%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60580 61453 . + . ID=id-AFQR01000036.1:60580..61453;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60583 61450 . + . ID=id-AFQR01000036.1:60583..61450;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60598 61288 . + . ID=id-AFQR01000036.1:60598..61288;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60691 61342 . + . ID=id-AFQR01000036.1:60691..61342;Note=multi-dom%3B label: HTH_ARAC;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60736 61303 . + . ID=id-AFQR01000036.1:60736..61303;Dbxref=InterPro:IPR018060;Note=ProfileScan:PS01124~hth_arac_family_2~dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 60775 61258 . + . ID=id-AFQR01000036.1:60775..61258;Note=HMMPanther:PTHR11019~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 61714 63120 . - . ID=gene-GGE_1888;Name=GGE_1888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank CDS 61714 63120 . - 0 ID=cds-EGT79705.1;Parent=gene-GGE_1888;Dbxref=GeneID:2498052,InterPro:IPR004770,InterPro:IPR018461,PFAM:PF03553,TIGRFAM:TIGR00931,NCBI_GP:EGT79705.1;Name=EGT79705.1;Note=HI_1107;Ontology_term=GO:0006885,GO:0006814,GO:0016021,GO:0015385;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=sodium:hydrogen antiporter activity|0015385||;go_process=regulation of pH|0006885||,sodium ion transport|0006814||;locus_tag=GGE_1888;product=putative na+/H+ antiporter NhaC-like protein;protein_id=EGT79705.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61738 63094 . - . ID=id-GGE_1888;Dbxref=InterPro:IPR004770,TIGRFAM:TIGR00931;Note=antiport_nhac: na+/h+ antiporter nhac~na+/h+ antiporter nhac;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61738 63037 . - . ID=id-GGE_1888-2;Note=multi-dom%3B label: antiport_nhaC;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61753 61783 . - . ID=id-GGE_1888-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 62029 62038 . - . ID=id-GGE_1888-4;Note=superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 62200 62614 . - . ID=id-GGE_1888-5;Dbxref=InterPro:IPR018461,PFAM:PF03553;Note=na_h_antiporter~na+/h+ antiporter nhac-like;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 62206 62566 . - . ID=id-GGE_1888-6;Note=superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1888 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61747 62173 . + . ID=id-AFQR01000036.1:61747..62173;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61759 61945 . + . ID=id-AFQR01000036.1:61759..61945;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61762 63061 . + . ID=id-AFQR01000036.1:61762..63061;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61771 62497 . + . ID=id-AFQR01000036.1:61771..62497;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61774 62425 . + . ID=id-AFQR01000036.1:61774..62425;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 63037 . + . ID=id-AFQR01000036.1:61783..63037;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62956 . + . ID=id-AFQR01000036.1:61783..62956;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62800 . + . ID=id-AFQR01000036.1:61783..62800;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62689 . + . ID=id-AFQR01000036.1:61783..62689;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62296 . + . ID=id-AFQR01000036.1:61783..62296;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62137 . + . ID=id-AFQR01000036.1:61783..62137;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 62050 . + . ID=id-AFQR01000036.1:61783..62050;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 61939 . + . ID=id-AFQR01000036.1:61783..61939;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 61783 61834 . + . ID=id-AFQR01000036.1:61783..61834;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 63122 63253 . - . ID=gene-GGE_1889;Name=GGE_1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1889 GCA_000222085.2|AFQR01000036.1 Genbank CDS 63122 63253 . - 0 ID=cds-EGT79706.1;Parent=gene-GGE_1889;Dbxref=InterPro:IPR015422,NCBI_GP:EGT79706.1;Name=EGT79706.1;Note=Hypothetical pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;Ontology_term=GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;locus_tag=GGE_1889;product=putative pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;protein_id=EGT79706.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63128 63224 . - . ID=id-GGE_1889;Note=superfamily~HMMPanther:PTHR11751:SF21~aminotransferase related~HMMPanther:PTHR11751~family not named%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_1889 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63128 63218 . - . ID=id-GGE_1889-2;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature;locus_tag=GGE_1889 GCA_000222085.2|AFQR01000036.1 Genbank gene 63384 64295 . - . ID=gene-GGE_1890;Name=GGE_1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank CDS 63384 64295 . - 0 ID=cds-EGT79707.1;Parent=gene-GGE_1890;Dbxref=InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,NCBI_GP:EGT79707.1;Name=EGT79707.1;Note=Hypothetical pyridoxal phosphate-dependent transferase%2C major domain;Ontology_term=GO:0009058,GO:0003824,GO:0030170,GO:0016769;gbkey=CDS;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,transferase activity transferring nitrogenous groups|0016769||;go_process=biosynthetic process|0009058||;locus_tag=GGE_1890;product=putative pyridoxal phosphate-dependent transferase%2C major domain-containing protein;protein_id=EGT79707.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63393 64287 . - . ID=id-GGE_1890;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63399 64281 . - . ID=id-GGE_1890-2;Note=HMMPanther:PTHR11751:SF21~aminotransferase related~HMMPanther:PTHR11751~family not named;gbkey=misc_feature;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63459 64023 . - . ID=id-GGE_1890-3;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63468 64212 . - . ID=id-GGE_1890-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63525 64002 . - . ID=id-GGE_1890-5;Dbxref=InterPro:IPR004839,PFAM:PF00155;Note=aminotran_1_2~aminotransferase%2C class i/classii;gbkey=misc_feature;locus_tag=GGE_1890 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 63579 64098 . + . ID=id-AFQR01000036.1:63579..64098;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 64508 65827 . + . ID=gene-GGE_1891;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank CDS 64508 65827 . + 0 ID=cds-EGT79708.1;Parent=gene-GGE_1891;Dbxref=GeneID:1175033,InterPro:IPR001998,InterPro:IPR012307,InterPro:IPR013022,InterPro:IPR013452,PFAM:PF01261,TIGRFAM:TIGR02630,NCBI_GP:EGT79708.1;Name=EGT79708.1;Ontology_term=GO:0005975,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_1891;product=Xylose isomerase;protein_id=EGT79708.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64517 65819 . + . ID=id-GGE_1891;Dbxref=InterPro:IPR013022;Note=superfamily~superfamily:SSF51658~xylose isomerase-like~xylose isomerase-like%2C tim barrel domain%3B label: RhaA superfamily;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64517 65816 . + . ID=id-GGE_1891-2;Dbxref=InterPro:IPR013022;Note=Gene3D:3.20.20.150~xylose isomerase-like%2C tim barrel domain;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64520 65810 . + . ID=id-GGE_1891-3;Dbxref=InterPro:IPR013452,TIGRFAM:TIGR02630;Note=xylose_isom_a: xylose isomerase~xylose isomerase%2C bacterial type;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64541 65789 . + . ID=id-GGE_1891-4;Dbxref=InterPro:IPR001998;Note=HAMAP:MF_00455~xylose_isom_a~xylose isomerase;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64613 65717 . + . ID=id-GGE_1891-5;Dbxref=InterPro:IPR001998;Note=ProfileScan:PS51415~xylose_isomerase~xylose isomerase;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64937 64940 . + . ID=id-GGE_1891-6;Dbxref=InterPro:IPR012307,PFAM:PF01261;Note=ap_endonuc_2~xylose isomerase%2C tim barrel domain;gbkey=misc_feature;gene=xylA;locus_tag=GGE_1891 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64544 65507 . - . ID=id-AFQR01000036.1:64544..65507;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64544 65408 . - . ID=id-AFQR01000036.1:64544..65408;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64568 65129 . - . ID=id-AFQR01000036.1:64568..65129;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64568 64976 . - . ID=id-AFQR01000036.1:64568..64976;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64571 64907 . - . ID=id-AFQR01000036.1:64571..64907;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64574 65048 . - . ID=id-AFQR01000036.1:64574..65048;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64577 64784 . - . ID=id-AFQR01000036.1:64577..64784;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64583 65195 . - . ID=id-AFQR01000036.1:64583..65195;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 64592 65321 . - . ID=id-AFQR01000036.1:64592..65321;Dbxref=InterPro:IPR001998;Note=FPrintScan:PR00688~xylosismrase~xylose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 65830 67365 . + . ID=gene-GGE_1892;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank CDS 65830 67365 . + 0 ID=cds-EGT79709.1;Parent=gene-GGE_1892;Dbxref=GeneID:1175037,InterPro:IPR000577,InterPro:IPR006000,InterPro:IPR018483,InterPro:IPR018484,InterPro:IPR018485,PFAM:PF00370,PFAM:PF02782,TIGRFAM:TIGR01312,NCBI_GP:EGT79709.1;Name=EGT79709.1;Ontology_term=GO:0005975,GO:0005997,GO:0016773,GO:0004856;gbkey=CDS;gene=xylB;go_function=phosphotransferase activity alcohol group as acceptor|0016773||,xylulokinase activity|0004856||;go_process=carbohydrate metabolic process|0005975||,xylulose metabolic process|0005997||;locus_tag=GGE_1892;product=Xylulose kinase;protein_id=EGT79709.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65837 65846 . + . ID=id-GGE_1892;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65887 67285 . + . ID=id-GGE_1892-2;Dbxref=InterPro:IPR000577;Note=HMMPanther:PTHR10196:SF10~xylulose kinase~HMMPanther:PTHR10196~sugar kinase~carbohydrate kinase%2C fggy;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65887 66598 . + . ID=id-GGE_1892-3;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65887 66595 . + . ID=id-GGE_1892-4;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65887 66592 . + . ID=id-GGE_1892-5;Dbxref=InterPro:IPR018484,PFAM:PF00370;Note=superfamily~fggy_n~carbohydrate kinase%2C fggy%3B label: FGGY_N superfamily;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65893 67294 . + . ID=id-GGE_1892-6;Dbxref=InterPro:IPR006000,TIGRFAM:TIGR01312;Note=multi-dom~xylb: xylulokinase~xylulokinase%3B label: XylB;gbkey=misc_feature;gene=xylB;locus_tag=GGE_1892 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65855 65864 . - . ID=id-AFQR01000036.1:65855..65864;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65869 66292 . - . ID=id-AFQR01000036.1:65869..66292;Dbxref=InterPro:IPR018483;Note=PatternScan:PS00933~fggy_kinases_1~carbohydrate kinase%2C fggy%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65875 67171 . - . ID=id-AFQR01000036.1:65875..67171;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65896 66958 . - . ID=id-AFQR01000036.1:65896..66958;Dbxref=InterPro:IPR018483;Note=PatternScan:PS00445~fggy_kinases_2~carbohydrate kinase%2C fggy%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 65896 66817 . - . ID=id-AFQR01000036.1:65896..66817;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 66083 66092 . - . ID=id-AFQR01000036.1:66083..66092;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 66313 66673 . - . ID=id-AFQR01000036.1:66313..66673;Note=superfamily%3B label: FGGY_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 66382 66673 . - . ID=id-AFQR01000036.1:66382..66673;Dbxref=InterPro:IPR018485,PFAM:PF02782;Note=fggy_c~carbohydrate kinase%2C fggy;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 66526 66658 . - . ID=id-AFQR01000036.1:66526..66658;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 66532 66655 . - . ID=id-AFQR01000036.1:66532..66655;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 67416 68342 . - . ID=gene-GGE_1893;Name=hldD;gbkey=Gene;gene=hldD;gene_biotype=protein_coding;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank CDS 67416 68342 . - 0 ID=cds-EGT79710.1;Parent=gene-GGE_1893;Dbxref=GeneID:1172915,InterPro:IPR001509,InterPro:IPR011912,InterPro:IPR016040,PFAM:PF01370,TIGRFAM:TIGR02197,NCBI_GP:EGT79710.1;Name=EGT79710.1;Ontology_term=GO:0005975,GO:0044237,GO:0008152,GO:0008712,GO:0050661,GO:0005488,GO:0003824,GO:0050662;gbkey=CDS;gene=hldD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||,NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||;go_process=carbohydrate metabolic process|0005975||,cellular metabolic process|0044237||,metabolic process|0008152||;locus_tag=GGE_1893;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=EGT79710.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67416 68342 . - . ID=id-GGE_1893;Note=VFDB hit~VFDB:VFG0332;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67416 68340 . - . ID=id-GGE_1893-2;Dbxref=InterPro:IPR011912;Note=HAMAP:MF_01601~heptose_epimerase~adp-l-glycero-d-manno-heptose-6-epimerase;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67416 68337 . - . ID=id-GGE_1893-3;Note=specific~superfamily~multi-dom%3B label: ADP_GME_SDR_e;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67416 68334 . - . ID=id-GGE_1893-4;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67422 68337 . - . ID=id-GGE_1893-5;Dbxref=InterPro:IPR011912,TIGRFAM:TIGR02197;Note=heptose_epim: adp-glyceromanno-heptose~adp-l-glycero-d-manno-heptose-6-epimerase;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67422 68328 . - . ID=id-GGE_1893-6;Dbxref=InterPro:IPR011912;Note=HMMPanther:PTHR10366:SF29~adp-l-glycero-d-mannoheptose-6-epimerase~adp-l-glycero-d-manno-heptose-6-epimerase~HMMPanther:PTHR10366~family not named;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67422 68118 . - . ID=id-GGE_1893-7;Dbxref=InterPro:IPR001509,PFAM:PF01370;Note=epimerase~nad-dependent epimerase/dehydratase;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67422 67926 . - . ID=id-GGE_1893-8;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=hldD;locus_tag=GGE_1893 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 67773 67932 . + . ID=id-AFQR01000036.1:67773..67932;Note=Gene3D:3.90.25.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 68395 68898 . - . ID=gene-GGE_1894;Name=GGE_1894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank CDS 68395 68898 . - 0 ID=cds-EGT79711.1;Parent=gene-GGE_1894;Dbxref=GeneID:1174688,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF08534,NCBI_GP:EGT79711.1;Name=EGT79711.1;Note=HI_1115;Ontology_term=GO:0045454,GO:0006662,GO:0009055,GO:0016491,GO:0015035;gbkey=CDS;go_function=electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,glycerol ether metabolic process|0006662||;locus_tag=GGE_1894;product=Thioredoxin-like protein;protein_id=EGT79711.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68395 68857 . - . ID=id-GGE_1894;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68420 68429 . - . ID=id-GGE_1894-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68467 68782 . - . ID=id-GGE_1894-3;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68485 68752 . - . ID=id-GGE_1894-4;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68506 68698 . - . ID=id-GGE_1894-5;Dbxref=InterPro:IPR013740,PFAM:PF08534;Note=redoxin~redoxin;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68509 68767 . - . ID=id-GGE_1894-6;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_1894 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68452 68578 . + . ID=id-AFQR01000036.1:68452..68578;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 68497 68551 . + . ID=id-AFQR01000036.1:68497..68551;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 69009 69680 . + . ID=gene-GGE_1895;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank CDS 69009 69680 . + 0 ID=cds-EGT79712.1;Parent=gene-GGE_1895;Dbxref=GeneID:81335903,InterPro:IPR002915,InterPro:IPR011343,InterPro:IPR013785,InterPro:IPR022979,PFAM:PF01791,PIR:PIRSF001357,TIGRFAM:TIGR00126,NCBI_GP:EGT79712.1;Name=EGT79712.1;Ontology_term=GO:0009264,GO:0008152,GO:0005737,GO:0003824,GO:0004139,GO:0016829;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,deoxyribose-phosphate aldolase activity|0004139||,lyase activity|0016829||;go_process=deoxyribonucleotide catabolic process|0009264||,metabolic process|0008152||;locus_tag=GGE_1895;product=Deoxyribose-phosphate aldolase;protein_id=EGT79712.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69009 69678 . + . ID=id-GGE_1895;Dbxref=InterPro:IPR011343,PIR:PIRSF001357;Note=deoxyribose-phosphate aldolase~deoxyribose-phosphate aldolase;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69009 69663 . + . ID=id-GGE_1895-2;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69015 69666 . + . ID=id-GGE_1895-3;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69021 69651 . + . ID=id-GGE_1895-4;Dbxref=InterPro:IPR022979;Note=HAMAP:MF_00114~deoc_type1~deoxyribose-phosphate aldolase%2C type 1;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69024 69639 . + . ID=id-GGE_1895-5;Dbxref=InterPro:IPR011343,TIGRFAM:TIGR00126;Note=deoc: deoxyribose-phosphate aldolase~deoxyribose-phosphate aldolase;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69027 69639 . + . ID=id-GGE_1895-6;Dbxref=InterPro:IPR011343;Note=HMMPanther:PTHR10889~deoxyribose-phosphate aldolase~deoxyribose-phosphate aldolase;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69027 69636 . + . ID=id-GGE_1895-7;Dbxref=InterPro:IPR002915,PFAM:PF01791;Note=deoc~deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69027 69585 . + . ID=id-GGE_1895-8;Note=specific~superfamily%3B label: DeoC;gbkey=misc_feature;gene=deoC;locus_tag=GGE_1895 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69063 69606 . - . ID=id-AFQR01000036.1:69063..69606;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 69717 71246 . - . ID=gene-GGE_1896;Name=comM;gbkey=Gene;gene=comM;gene_biotype=protein_coding;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank CDS 69717 71246 . - 0 ID=cds-EGT79713.1;Parent=gene-GGE_1896;Dbxref=GeneID:1176314,InterPro:IPR000523,InterPro:IPR001208,InterPro:IPR004482,InterPro:IPR020568,PFAM:PF01078,TIGRFAM:TIGR00368,NCBI_GP:EGT79713.1;Name=EGT79713.1;Ontology_term=GO:0006260,GO:0015995,GO:0015979,GO:0005524,GO:0003677,GO:0016851;gbkey=CDS;gene=comM;go_function=ATP binding|0005524||,DNA binding|0003677||,magnesium chelatase activity|0016851||;go_process=DNA replication|0006260||,chlorophyll biosynthetic process|0015995||,photosynthesis|0015979||;locus_tag=GGE_1896;product=Competence protein ComM;protein_id=EGT79713.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69726 71238 . - . ID=id-GGE_1896;Note=HMMPanther:PTHR11603:SF148~mg chelatase%2C subunit chli~HMMPanther:PTHR11603~family not named;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69735 71193 . - . ID=id-GGE_1896-2;Dbxref=InterPro:IPR004482,TIGRFAM:TIGR00368;Note=multi-dom~tigr00368: mg chelatase-like protein~mg chelatase-related protein%3B label: TIGR00368;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69741 70209 . - . ID=id-GGE_1896-3;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 70287 70668 . - . ID=id-GGE_1896-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 70299 70323 . - . ID=id-GGE_1896-5;Dbxref=InterPro:IPR000523,PFAM:PF01078;Note=mg_chelatase~magnesium chelatase%2C chli subunit;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 70692 70701 . - . ID=id-GGE_1896-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=comM;locus_tag=GGE_1896 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69759 70680 . + . ID=id-AFQR01000036.1:69759..70680;Dbxref=InterPro:IPR001208;Note=FPrintScan:PR01657~mcmfamily~dna-dependent atpase mcm;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69762 70596 . + . ID=id-AFQR01000036.1:69762..70596;Dbxref=InterPro:IPR001208;Note=FPrintScan:PR01657~mcmfamily~dna-dependent atpase mcm;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 69765 70356 . + . ID=id-AFQR01000036.1:69765..70356;Dbxref=InterPro:IPR001208;Note=FPrintScan:PR01657~mcmfamily~dna-dependent atpase mcm;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 70299 70314 . + . ID=id-AFQR01000036.1:70299..70314;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 70302 70302 . + . ID=id-AFQR01000036.1:70302..70302;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71256 71265 . + . ID=id-AFQR01000036.1:71256..71265;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 71361 71978 . - . ID=gene-GGE_1897;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank CDS 71361 71978 . - 0 ID=cds-EGT79714.1;Parent=gene-GGE_1897;Dbxref=GeneID:1176322,InterPro:IPR002917,InterPro:IPR019987,PFAM:PF01926,TIGRFAM:TIGR03598,NCBI_GP:EGT79714.1;Name=EGT79714.1;Ontology_term=GO:0000917,GO:0005622,GO:0005525;gbkey=CDS;gene=engB;go_component=intracellular|0005622||;go_function=GTP binding|0005525||;go_process=barrier septum formation|0000917||;locus_tag=GGE_1897;product=Putative GTP-binding protein engB;protein_id=EGT79714.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71394 71928 . - . ID=id-GGE_1897;Dbxref=InterPro:IPR019987;Note=HAMAP:MF_00321~gtpase_engb~gtp-binding protein%2C ribosome biogenesis%2C ysxc;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71394 71919 . - . ID=id-GGE_1897-2;Dbxref=InterPro:IPR019987,TIGRFAM:TIGR03598;Note=gtpase_ysxc: ribosome biogenesis gtp-bind~gtp-binding protein%2C ribosome biogenesis%2C ysxc;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71397 71913 . - . ID=id-GGE_1897-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71400 71925 . - . ID=id-GGE_1897-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71400 71910 . - . ID=id-GGE_1897-5;Note=HMMPanther:PTHR11649~family not named;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71451 71871 . - . ID=id-GGE_1897-6;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 71481 71688 . - . ID=id-GGE_1897-7;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature;gene=engB;locus_tag=GGE_1897 GCA_000222085.2|AFQR01000036.1 Genbank gene 72082 72948 . + . ID=gene-GGE_1898;Name=GGE_1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1898 GCA_000222085.2|AFQR01000036.1 Genbank CDS 72082 72948 . + 0 ID=cds-EGT79715.1;Parent=gene-GGE_1898;Dbxref=GeneID:2495689,InterPro:IPR007488,PFAM:PF04393,NCBI_GP:EGT79715.1;Name=EGT79715.1;Note=HI_1119;gbkey=CDS;locus_tag=GGE_1898;product=hypothetical protein;protein_id=EGT79715.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 72082 72946 . + . ID=id-GGE_1898;Note=superfamily%3B label: DUF535 superfamily;gbkey=misc_feature;locus_tag=GGE_1898 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 72130 72895 . + . ID=id-GGE_1898-2;Dbxref=InterPro:IPR007488,PFAM:PF04393;Note=duf535~protein of unknown function duf535;gbkey=misc_feature;locus_tag=GGE_1898 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 72375 72384 . - . ID=id-AFQR01000036.1:72375..72384;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 73072 74025 . + . ID=gene-GGE_1899;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank CDS 73072 74025 . + 0 ID=cds-EGT79716.1;Parent=gene-GGE_1899;Dbxref=GeneID:81335894,InterPro:IPR001585,InterPro:IPR004730,InterPro:IPR013785,InterPro:IPR018225,PFAM:PF00923,TIGRFAM:TIGR00874,NCBI_GP:EGT79716.1;Name=EGT79716.1;Ontology_term=GO:0005975,GO:0008152,GO:0006098,GO:0005737,GO:0003824,GO:0004801;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,transaldolase activity|0004801||;go_process=carbohydrate metabolic process|0005975||,metabolic process|0008152||,pentose-phosphate shunt|0006098||;locus_tag=GGE_1899;product=Transaldolase;protein_id=EGT79716.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73072 74023 . + . ID=id-GGE_1899;Dbxref=InterPro:IPR001585;Note=multi-dom~HMMPanther:PTHR10683~transaldolase~transaldolase%3B label: PTZ00411;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73078 74020 . + . ID=id-GGE_1899-2;Dbxref=InterPro:IPR004730;Note=HAMAP:MF_00492~transaldolase_1~transaldolase 1;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73081 74017 . + . ID=id-GGE_1899-3;Dbxref=InterPro:IPR004730,TIGRFAM:TIGR00874;Note=talab: transaldolase~transaldolase 1~superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73081 74014 . + . ID=id-GGE_1899-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73081 74005 . + . ID=id-GGE_1899-5;Note=specific~superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73114 73969 . + . ID=id-GGE_1899-6;Dbxref=InterPro:IPR001585,PFAM:PF00923;Note=transaldolase~transaldolase;gbkey=misc_feature;gene=tal;locus_tag=GGE_1899 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73099 73165 . - . ID=id-AFQR01000036.1:73099..73165;Dbxref=InterPro:IPR018225;Note=PatternScan:PS01054~transaldolase_1~transaldolase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 73126 73459 . - . ID=id-AFQR01000036.1:73126..73459;Dbxref=InterPro:IPR018225;Note=PatternScan:PS00958~transaldolase_2~transaldolase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74048 74057 . - . ID=id-AFQR01000036.1:74048..74057;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74067 74076 . + . ID=id-AFQR01000036.1:74067..74076;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 74113 75531 . - . ID=gene-GGE_1900;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank CDS 74113 75531 . - 0 ID=cds-EGT79717.1;Parent=gene-GGE_1900;Dbxref=GeneID:1168534,InterPro:IPR000362,InterPro:IPR003031,InterPro:IPR004708,InterPro:IPR008948,InterPro:IPR018951,InterPro:IPR020557,InterPro:IPR022761,PFAM:PF00206,PFAM:PF10415,TIGRFAM:TIGR00839,NCBI_GP:EGT79717.1;Name=EGT79717.1;Ontology_term=GO:0006531,GO:0006099,GO:0008797,GO:0003824,GO:0016829;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||,catalytic activity|0003824||,lyase activity|0016829||;go_process=aspartate metabolic process|0006531||,tricarboxylic acid cycle|0006099||;locus_tag=GGE_1900;product=Aspartate ammonia-lyase;protein_id=EGT79717.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74113 75523 . - . ID=id-GGE_1900;Note=multi-dom%3B label: aspA;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74119 75502 . - . ID=id-GGE_1900-2;Note=HMMPanther:PTHR11444:SF8~subfamily not named~HMMPanther:PTHR11444~family not named;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74122 74530 . - . ID=id-GGE_1900-3;Note=Gene3D:1.10.275.10;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74125 75508 . - . ID=id-GGE_1900-4;Dbxref=InterPro:IPR008948;Note=superfamily:SSF48557~l-aspartase-like~l-aspartase-like;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74128 75517 . - . ID=id-GGE_1900-5;Dbxref=InterPro:IPR004708,TIGRFAM:TIGR00839;Note=aspa: aspartate ammonia-lyase~aspartate ammonia-lyase;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74128 75472 . - . ID=id-GGE_1900-6;Note=specific~superfamily%3B label: Aspartase;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74149 75112 . - . ID=id-GGE_1900-7;Dbxref=InterPro:IPR022761,PFAM:PF00206;Note=lyase_1~lyase 1;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74539 74938 . - . ID=id-GGE_1900-8;Note=Gene3D:1.20.200.10;gbkey=misc_feature;gene=aspA;locus_tag=GGE_1900 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74143 75070 . + . ID=id-AFQR01000036.1:74143..75070;Dbxref=InterPro:IPR020557;Note=PatternScan:PS00163~fumarate_lyases~fumarate lyase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74149 75094 . + . ID=id-AFQR01000036.1:74149..75094;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74164 75070 . + . ID=id-AFQR01000036.1:74164..75070;Dbxref=InterPro:IPR000362,InterPro:IPR003031;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase~FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74170 74659 . + . ID=id-AFQR01000036.1:74170..74659;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74170 74524 . + . ID=id-AFQR01000036.1:74170..74524;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74176 74644 . + . ID=id-AFQR01000036.1:74176..74644;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74182 74521 . + . ID=id-AFQR01000036.1:74182..74521;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74197 74932 . + . ID=id-AFQR01000036.1:74197..74932;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74248 75364 . + . ID=id-AFQR01000036.1:74248..75364;Note=Gene3D:1.10.40.30;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 74278 75343 . + . ID=id-AFQR01000036.1:74278..75343;Dbxref=InterPro:IPR018951,PFAM:PF10415;Note=fumarasec_c~fumarase c;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 75687 76499 . - . ID=gene-GGE_1901;Name=GGE_1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1901 GCA_000222085.2|AFQR01000036.1 Genbank CDS 75687 76499 . - 0 ID=cds-EGT79718.1;Parent=gene-GGE_1901;Dbxref=GeneID:319897948,InterPro:IPR002669,PFAM:PF01774,NCBI_GP:EGT79718.1;Name=EGT79718.1;Note=YP_004136145;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;go_function=nickel ion binding|0016151||;go_process=nitrogen compound metabolic process|0006807||;locus_tag=GGE_1901;product=urease accessory protein ureh;protein_id=EGT79718.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75687 76491 . - . ID=id-GGE_1901;Dbxref=InterPro:IPR002669;Note=HAMAP:MF_01384~ured~urease accessory protein ured;gbkey=misc_feature;locus_tag=GGE_1901 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75693 75735 . - . ID=id-GGE_1901-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1901 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75741 76437 . - . ID=id-GGE_1901-3;Note=superfamily%3B label: UreD superfamily;gbkey=misc_feature;locus_tag=GGE_1901 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75831 76326 . - . ID=id-GGE_1901-4;Dbxref=InterPro:IPR002669,PFAM:PF01774;Note=ured~urease accessory protein ured;gbkey=misc_feature;locus_tag=GGE_1901 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75714 76341 . + . ID=id-AFQR01000036.1:75714..76341;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 75762 76305 . + . ID=id-AFQR01000036.1:75762..76305;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 76553 77188 . - . ID=gene-GGE_1902;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank CDS 76553 77188 . - 0 ID=cds-EGT79719.1;Parent=gene-GGE_1902;Dbxref=GeneID:1174905,InterPro:IPR003495,InterPro:IPR004400,InterPro:IPR012202,PFAM:PF02492,PIR:PIRSF005624,TIGRFAM:TIGR00101,NCBI_GP:EGT79719.1;Name=EGT79719.1;Ontology_term=GO:0005737,GO:0005524,GO:0016151;gbkey=CDS;gene=ureG;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,nickel ion binding|0016151||;locus_tag=GGE_1902;product=Urease accessory protein ureG;protein_id=EGT79719.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76553 77180 . - . ID=id-GGE_1902;Dbxref=InterPro:IPR012202,PIR:PIRSF005624;Note=ni(2+)-binding gtpase%2C [nife]-hydrogenase/urease maturation factor~[nife]-hydrogenase/urease maturation factor%2C ni(2+)-binding gtpase;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76562 77150 . - . ID=id-GGE_1902-2;Dbxref=InterPro:IPR004400;Note=HAMAP:MF_01389~ureg~urease accessory protein ureg;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76565 77150 . - . ID=id-GGE_1902-3;Dbxref=InterPro:IPR004400,TIGRFAM:TIGR00101;Note=superfamily~ureg: urease accessory protein ureg~urease accessory protein ureg%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76568 77132 . - . ID=id-GGE_1902-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76571 77111 . - . ID=id-GGE_1902-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 76574 77066 . - . ID=id-GGE_1902-6;Dbxref=InterPro:IPR003495,PFAM:PF02492;Note=cobw~cobalamin (vitamin b12) biosynthesis cobw-like;gbkey=misc_feature;gene=ureG;locus_tag=GGE_1902 GCA_000222085.2|AFQR01000036.1 Genbank gene 77271 77978 . - . ID=gene-GGE_1903;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=GGE_1903 GCA_000222085.2|AFQR01000036.1 Genbank CDS 77271 77978 . - 0 ID=cds-EGT79720.1;Parent=gene-GGE_1903;Dbxref=InterPro:IPR002639,PFAM:PF01730,PIR:PIRSF009467,NCBI_GP:EGT79720.1;Name=EGT79720.1;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;gene=ureF;go_function=nickel ion binding|0016151||;go_process=nitrogen compound metabolic process|0006807||;locus_tag=GGE_1903;product=Urease accessory protein ureF;protein_id=EGT79720.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77289 77961 . - . ID=id-GGE_1903;Note=superfamily%3B label: UreF superfamily;gbkey=misc_feature;gene=ureF;locus_tag=GGE_1903 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77304 77946 . - . ID=id-GGE_1903-2;Dbxref=InterPro:IPR002639,PIR:PIRSF009467;Note=HAMAP:MF_01385~uref~urease accessory protein uref~urease accessory protein uref~urease accessory protein uref;gbkey=misc_feature;gene=ureF;locus_tag=GGE_1903 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77400 77727 . - . ID=id-GGE_1903-3;Dbxref=InterPro:IPR002639,PFAM:PF01730;Note=uref~urease accessory protein uref;gbkey=misc_feature;gene=ureF;locus_tag=GGE_1903 GCA_000222085.2|AFQR01000036.1 Genbank gene 77963 78520 . - . ID=gene-GGE_1904;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank CDS 77963 78520 . - 0 ID=cds-EGT79721.1;Parent=gene-GGE_1904;Dbxref=GeneID:167012855,InterPro:IPR004029,InterPro:IPR007864,InterPro:IPR012406,PFAM:PF02814,PFAM:PF05194,PIR:PIRSF036402,NCBI_GP:EGT79721.1;Name=EGT79721.1;Ontology_term=GO:0018307,GO:0006461,GO:0006457,GO:0019627,GO:0005737,GO:0016151;gbkey=CDS;gene=ureE;go_component=cytoplasm|0005737||;go_function=nickel ion binding|0016151||;go_process=enzyme active site formation|0018307||,protein complex assembly|0006461||,protein folding|0006457||,urea metabolic process|0019627||;locus_tag=GGE_1904;product=Urease accessory protein ureE;protein_id=EGT79721.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77987 78479 . - . ID=id-GGE_1904;Dbxref=InterPro:IPR012406,PIR:PIRSF036402;Note=urease accessory protein uree (nickel metallochaperone)~urease accessory protein uree;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77987 78416 . - . ID=id-GGE_1904-2;Note=multi-dom%3B label: ureE;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77990 78419 . - . ID=id-GGE_1904-3;Dbxref=InterPro:IPR012406;Note=HAMAP:MF_00822~uree~urease accessory protein uree;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77990 78386 . - . ID=id-GGE_1904-4;Note=specific~superfamily%3B label: UreE;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77990 78200 . - . ID=id-GGE_1904-5;Dbxref=InterPro:IPR004029;Note=superfamily:SSF69287~urease metallochaperone uree domain~uree urease accessory;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 77999 78188 . - . ID=id-GGE_1904-6;Note=Gene3D:2.60.260.20;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78020 78155 . - . ID=id-GGE_1904-7;Dbxref=InterPro:IPR004029,PFAM:PF02814;Note=uree_n~uree urease accessory;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78227 78233 . - . ID=id-GGE_1904-8;Dbxref=InterPro:IPR007864,PFAM:PF05194;Note=uree_c~uree urease accessory;gbkey=misc_feature;gene=ureE;locus_tag=GGE_1904 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78026 78443 . + . ID=id-AFQR01000036.1:78026..78443;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78167 78227 . + . ID=id-AFQR01000036.1:78167..78227;Dbxref=InterPro:IPR007864;Note=superfamily:SSF69737~urease metallochaperone uree domain~uree urease accessory;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78188 78227 . + . ID=id-AFQR01000036.1:78188..78227;Dbxref=InterPro:IPR007864;Note=Gene3D:3.30.70.790~uree urease accessory;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 78591 80309 . - . ID=gene-GGE_1905;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank CDS 78591 80309 . - 0 ID=cds-EGT79722.1;Parent=gene-GGE_1905;Dbxref=GeneID:1174884,InterPro:IPR005848,InterPro:IPR006680,InterPro:IPR011059,InterPro:IPR011612,InterPro:IPR017950,InterPro:IPR017951,PFAM:PF00449,PFAM:PF01979,TIGRFAM:TIGR01792,NCBI_GP:EGT79722.1;Name=EGT79722.1;Ontology_term=GO:0006807,GO:0019627,GO:0016810,GO:0016787,GO:0016151,GO:0009039;gbkey=CDS;gene=ureC;go_function=hydrolase activity acting on carbon-nitrogen (but not peptide) bonds|0016810||,hydrolase activity|0016787||,nickel ion binding|0016151||,urease activity|0009039||;go_process=nitrogen compound metabolic process|0006807||,urea metabolic process|0019627||;locus_tag=GGE_1905;product=Urease subunit alpha;protein_id=EGT79722.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78597 79146 . - . ID=id-GGE_1905;Dbxref=InterPro:IPR011059;Note=superfamily:SSF51338~composite domain of metallo-dependent hydrolase~metal-dependent hydrolase%2C composite domain;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78600 80301 . - . ID=id-GGE_1905-2;Dbxref=InterPro:IPR005848;Note=HAMAP:MF_01953~urease_alpha~urease%2C alpha subunit;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78603 80298 . - . ID=id-GGE_1905-3;Dbxref=InterPro:IPR005848,TIGRFAM:TIGR01792;Note=multi-dom~urease_alph: urease%2C alpha subunit~urease%2C alpha subunit%3B label: ureC;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78603 80295 . - . ID=id-GGE_1905-4;Note=specific~superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78603 78957 . - . ID=id-GGE_1905-5;Dbxref=InterPro:IPR011612,PFAM:PF00449;Note=urease_alpha~urease alpha-subunit;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78729 80112 . - . ID=id-GGE_1905-6;Note=HMMPanther:PTHR11647:SF13~subfamily not named~HMMPanther:PTHR11647~family not named;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78801 78834 . - . ID=id-GGE_1905-7;Note=Gene3D:2.30.40.10;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78987 79521 . - . ID=id-GGE_1905-8;Dbxref=InterPro:IPR006680,PFAM:PF01979;Note=amidohydro_1~amidohydrolase 1;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78999 79902 . - . ID=id-GGE_1905-9;Dbxref=InterPro:IPR017951;Note=ProfileScan:PS51368~urease_3~urease%2C alpha subunit~superfamily:SSF51556~metallo-dependent hydrolase;gbkey=misc_feature;gene=ureC;locus_tag=GGE_1905 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78630 78861 . + . ID=id-AFQR01000036.1:78630..78861;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78633 79887 . + . ID=id-AFQR01000036.1:78633..79887;Dbxref=InterPro:IPR005848;Note=FPrintScan:PR01752~urease~urease%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78633 78993 . + . ID=id-AFQR01000036.1:78633..78993;Dbxref=InterPro:IPR017950;Note=PatternScan:PS01120~urease_1~urease%2C alpha subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78639 79809 . + . ID=id-AFQR01000036.1:78639..79809;Dbxref=InterPro:IPR005848;Note=FPrintScan:PR01752~urease~urease%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78642 79614 . + . ID=id-AFQR01000036.1:78642..79614;Dbxref=InterPro:IPR005848;Note=FPrintScan:PR01752~urease~urease%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78642 79563 . + . ID=id-AFQR01000036.1:78642..79563;Dbxref=InterPro:IPR017950;Note=PatternScan:PS00145~urease_2~urease%2C alpha subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78645 79497 . + . ID=id-AFQR01000036.1:78645..79497;Dbxref=InterPro:IPR005848;Note=FPrintScan:PR01752~urease~urease%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78738 79896 . + . ID=id-AFQR01000036.1:78738..79896;Dbxref=InterPro:IPR011059;Note=superfamily:SSF51338~composite domain of metallo-dependent hydrolase~metal-dependent hydrolase%2C composite domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78753 79884 . + . ID=id-AFQR01000036.1:78753..79884;Note=Gene3D:2.30.40.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 78828 80067 . + . ID=id-AFQR01000036.1:78828..80067;Note=Gene3D:3.20.20.140;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 80321 80626 . - . ID=gene-GGE_1906;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=GGE_1906 GCA_000222085.2|AFQR01000036.1 Genbank CDS 80321 80626 . - 0 ID=cds-EGT79723.1;Parent=gene-GGE_1906;Dbxref=GeneID:1174890,InterPro:IPR002019,PFAM:PF00699,TIGRFAM:TIGR00192,NCBI_GP:EGT79723.1;Name=EGT79723.1;Ontology_term=GO:0006807,GO:0016151,GO:0009039;gbkey=CDS;gene=ureB;go_function=nickel ion binding|0016151||,urease activity|0009039||;go_process=nitrogen compound metabolic process|0006807||;locus_tag=GGE_1906;product=Urease subunit beta;protein_id=EGT79723.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80321 80624 . - . ID=id-GGE_1906;Dbxref=InterPro:IPR002019,TIGRFAM:TIGR00192;Note=specific~superfamily~urease_beta: urease%2C beta subunit~urease%2C beta subunit~Gene3D:2.10.150.10~urease%2C beta subunit~HAMAP:MF_01954~urease_beta~urease%2C beta subunit~superfamily:SSF51278~urease%2C beta-subunit~urease%2C beta subunit%3B label: Urease_beta;gbkey=misc_feature;gene=ureB;locus_tag=GGE_1906 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80327 80621 . - . ID=id-GGE_1906-2;Dbxref=InterPro:IPR002019,PFAM:PF00699;Note=urease_beta~urease%2C beta subunit;gbkey=misc_feature;gene=ureB;locus_tag=GGE_1906 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80462 80471 . + . ID=id-AFQR01000036.1:80462..80471;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 80649 80951 . - . ID=gene-GGE_1907;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=GGE_1907 GCA_000222085.2|AFQR01000036.1 Genbank CDS 80649 80951 . - 0 ID=cds-EGT79724.1;Parent=gene-GGE_1907;Dbxref=GeneID:166227115,InterPro:IPR002026,InterPro:IPR012010,PFAM:PF00547,PIR:PIRSF001223,TIGRFAM:TIGR00193,NCBI_GP:EGT79724.1;Name=EGT79724.1;Ontology_term=GO:0006807,GO:0019627,GO:0016151,GO:0009039;gbkey=CDS;gene=ureA;go_function=nickel ion binding|0016151||,urease activity|0009039||;go_process=nitrogen compound metabolic process|0006807||,urea metabolic process|0019627||;locus_tag=GGE_1907;product=Urease subunit gamma;protein_id=EGT79724.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80649 80949 . - . ID=id-GGE_1907;Dbxref=InterPro:IPR002026,InterPro:IPR012010,PIR:PIRSF001223,TIGRFAM:TIGR00193;Note=urease%2C gamma subunit~urease%2C gamma subunit~urease_gam: urease%2C gamma subunit~urease%2C alpha/gamma subunit~Gene3D:3.30.280.10~urease%2C alpha/gamma subunit~HAMAP:MF_00739~urease_gamma~urease%2C gamma subunit~superfamily:SSF54111~urease%2C gamma-subunit~urease%2C alpha/gamma subunit;gbkey=misc_feature;gene=ureA;locus_tag=GGE_1907 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80649 80946 . - . ID=id-GGE_1907-2;Dbxref=InterPro:IPR002026,PFAM:PF00547;Note=urease_gamma~urease%2C alpha/gamma subunit;gbkey=misc_feature;gene=ureA;locus_tag=GGE_1907 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80661 80937 . - . ID=id-GGE_1907-3;Note=specific~superfamily%3B label: Urease_gamma;gbkey=misc_feature;gene=ureA;locus_tag=GGE_1907 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 80676 80922 . - . ID=id-GGE_1907-4;Dbxref=InterPro:IPR002026;Note=BlastProDom:PD002319~q4qn07_haei8_q4qn07~urease%2C alpha/gamma subunit;gbkey=misc_feature;gene=ureA;locus_tag=GGE_1907 GCA_000222085.2|AFQR01000036.1 Genbank gene 81121 81411 . + . ID=gene-GGE_1908;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank CDS 81121 81411 . + 0 ID=cds-EGT79725.1;Parent=gene-GGE_1908;Dbxref=GeneID:166198374,InterPro:IPR011032,InterPro:IPR018369,InterPro:IPR020818,PFAM:PF00166,NCBI_GP:EGT79725.1;Name=EGT79725.1;Ontology_term=GO:0006457,GO:0005737,GO:0005524;gbkey=CDS;gene=groS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||;go_process=protein folding|0006457||;locus_tag=GGE_1908;product=10 kDa chaperonin;protein_id=EGT79725.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81121 81409 . + . ID=id-GGE_1908;Dbxref=InterPro:IPR011032,InterPro:IPR020818;Note=Gene3D:2.30.33.40~chaperonin cpn10~HMMPanther:PTHR10772~10 kda heat shock protein~chaperonin cpn10~superfamily:SSF50129~groes-like~groes-like;gbkey=misc_feature;gene=groS;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81127 81406 . + . ID=id-GGE_1908-2;Dbxref=InterPro:IPR020818;Note=HAMAP:MF_00580~ch10~chaperonin cpn10;gbkey=misc_feature;gene=groS;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81127 81403 . + . ID=id-GGE_1908-3;Dbxref=InterPro:IPR020818,PFAM:PF00166;Note=specific~superfamily~cpn10~chaperonin cpn10%3B label: cpn10;gbkey=misc_feature;gene=groS;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81130 81196 . + . ID=id-GGE_1908-4;Dbxref=InterPro:IPR018369;Note=PatternScan:PS00681~chaperonins_cpn10~chaperonin cpn10%2C conserved site;gbkey=misc_feature;gene=groS;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81130 81169 . + . ID=id-GGE_1908-5;Dbxref=InterPro:IPR020818;Note=FPrintScan:PR00297~chaperonin10~chaperonin cpn10;gbkey=misc_feature;gene=groS;locus_tag=GGE_1908 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81160 81301 . - . ID=id-AFQR01000036.1:81160..81301;Dbxref=InterPro:IPR020818;Note=FPrintScan:PR00297~chaperonin10~chaperonin cpn10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81163 81367 . - . ID=id-AFQR01000036.1:81163..81367;Dbxref=InterPro:IPR020818;Note=FPrintScan:PR00297~chaperonin10~chaperonin cpn10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81187 81196 . - . ID=id-AFQR01000036.1:81187..81196;Dbxref=InterPro:IPR020818;Note=FPrintScan:PR00297~chaperonin10~chaperonin cpn10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 81431 83074 . + . ID=gene-GGE_1909;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank CDS 81431 83074 . + 0 ID=cds-EGT79726.1;Parent=gene-GGE_1909;Dbxref=GeneID:166198464,InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,PFAM:PF00118,TIGRFAM:TIGR02348,NCBI_GP:EGT79726.1;Name=EGT79726.1;Ontology_term=GO:0044267,GO:0006457,GO:0042026,GO:0005737,GO:0005524;gbkey=CDS;gene=groL;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||;go_process=cellular protein metabolic process|0044267||,protein folding|0006457||,protein refolding|0042026||;locus_tag=GGE_1909;product=60 kDa chaperonin;protein_id=EGT79726.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81431 83072 . + . ID=id-GGE_1909;Dbxref=InterPro:IPR002423;Note=HMMPanther:PTHR11353:SF10~chaperonin-60kda%2C ch60~HMMPanther:PTHR11353~family not named~chaperonin cpn60/tcp-1;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81437 83066 . + . ID=id-GGE_1909-2;Dbxref=InterPro:IPR001844;Note=HAMAP:MF_00600~ch60~chaperonin cpn60;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81437 83033 . + . ID=id-GGE_1909-3;Note=multi-dom%3B label: groEL;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81440 83009 . + . ID=id-GGE_1909-4;Dbxref=InterPro:IPR001844,TIGRFAM:TIGR02348;Note=groel: chaperonin grol~chaperonin cpn60;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81440 82013 . + . ID=id-GGE_1909-5;Note=Gene3D:1.10.560.10;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81443 82994 . + . ID=id-GGE_1909-6;Note=specific~superfamily%3B label: chaperonin_like superfamily;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81449 82982 . + . ID=id-GGE_1909-7;Dbxref=InterPro:IPR002423;Note=superfamily:SSF48592~groel equatorial domain-like~chaperonin cpn60/tcp-1;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81500 82937 . + . ID=id-GGE_1909-8;Dbxref=InterPro:IPR002423,PFAM:PF00118;Note=cpn60_tcp1~chaperonin cpn60/tcp-1;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81512 81512 . + . ID=id-GGE_1909-9;Dbxref=InterPro:IPR001844;Note=FPrintScan:PR00298~chaperonin60~chaperonin cpn60;gbkey=misc_feature;gene=groL;locus_tag=GGE_1909 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81461 82814 . - . ID=id-AFQR01000036.1:81461..82814;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81464 83042 . - . ID=id-AFQR01000036.1:81464..83042;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81467 82646 . - . ID=id-AFQR01000036.1:81467..82646;Dbxref=InterPro:IPR018370;Note=PatternScan:PS00296~chaperonins_cpn60~chaperonin cpn60%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81470 81674 . - . ID=id-AFQR01000036.1:81470..81674;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81479 82538 . - . ID=id-AFQR01000036.1:81479..82538;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81497 82625 . - . ID=id-AFQR01000036.1:81497..82625;Dbxref=InterPro:IPR001844;Note=FPrintScan:PR00298~chaperonin60~chaperonin cpn60;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81497 82469 . - . ID=id-AFQR01000036.1:81497..82469;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81503 82235 . - . ID=id-AFQR01000036.1:81503..82235;Dbxref=InterPro:IPR001844;Note=FPrintScan:PR00298~chaperonin60~chaperonin cpn60;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81509 82481 . - . ID=id-AFQR01000036.1:81509..82481;Dbxref=InterPro:IPR001844;Note=FPrintScan:PR00298~chaperonin60~chaperonin cpn60;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81515 81680 . - . ID=id-AFQR01000036.1:81515..81680;Dbxref=InterPro:IPR001844;Note=FPrintScan:PR00298~chaperonin60~chaperonin cpn60;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81518 82643 . - . ID=id-AFQR01000036.1:81518..82643;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81602 81842 . - . ID=id-AFQR01000036.1:81602..81842;Note=superfamily:SSF54849~groel-intermediate domain like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81980 82022 . - . ID=id-AFQR01000036.1:81980..82022;Note=Gene3D:3.50.7.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 81983 82007 . - . ID=id-AFQR01000036.1:81983..82007;Note=superfamily:SSF52029~groel apical domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83093 83102 . + . ID=id-AFQR01000036.1:83093..83102;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 83184 83732 . + . ID=gene-GGE_1910;Name=GGE_1910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank CDS 83184 83732 . + 0 ID=cds-EGT79727.1;Parent=gene-GGE_1910;Dbxref=GeneID:1176090,InterPro:IPR011978,PFAM:PF03695,TIGRFAM:TIGR02292,NCBI_GP:EGT79727.1;Name=EGT79727.1;Note=HI_0817;gbkey=CDS;locus_tag=GGE_1910;product=UPF0149 protein;protein_id=EGT79727.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83184 83730 . + . ID=id-GGE_1910;Note=superfamily%3B label: UPF0149 superfamily;gbkey=misc_feature;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83184 83724 . + . ID=id-GGE_1910-2;Dbxref=InterPro:IPR011978;Note=HAMAP:MF_00346~upf0149~uncharacterised protein family upf0149;gbkey=misc_feature;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83184 83682 . + . ID=id-GGE_1910-3;Dbxref=InterPro:IPR011978,TIGRFAM:TIGR02292;Note=ygfb_yeca: yeca family protein~uncharacterised protein family upf0149;gbkey=misc_feature;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83190 83694 . + . ID=id-GGE_1910-4;Dbxref=InterPro:IPR011978;Note=superfamily:SSF101327~ygfb-like~uncharacterised protein family upf0149;gbkey=misc_feature;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83205 83685 . + . ID=id-GGE_1910-5;Dbxref=InterPro:IPR011978,PFAM:PF03695;Note=upf0149~uncharacterised protein family upf0149;gbkey=misc_feature;locus_tag=GGE_1910 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83223 83619 . - . ID=id-AFQR01000036.1:83223..83619;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 83744 85036 . + . ID=gene-GGE_1911;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank CDS 83744 85036 . + 0 ID=cds-EGT79728.1;Parent=gene-GGE_1911;Dbxref=GeneID:1168447,InterPro:IPR000994,InterPro:IPR001131,InterPro:IPR007865,PFAM:PF00557,PFAM:PF05195,NCBI_GP:EGT79728.1;Name=EGT79728.1;Ontology_term=GO:0009987,GO:0006508,GO:0004177,GO:0030145,GO:0008235;gbkey=CDS;gene=pepP;go_function=aminopeptidase activity|0004177||,manganese ion binding|0030145||,metalloexopeptidase activity|0008235||;go_process=cellular process|0009987||,proteolysis|0006508||;locus_tag=GGE_1911;product=Xaa-Pro aminopeptidase;protein_id=EGT79728.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83765 84236 . + . ID=id-GGE_1911;Note=superfamily:SSF53092~creatinase/prolidase n-terminal domain;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83771 84242 . + . ID=id-GGE_1911-2;Note=Gene3D:3.40.350.10;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83771 84149 . + . ID=id-GGE_1911-3;Note=superfamily%3B label: AMP_N superfamily;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83774 84122 . + . ID=id-GGE_1911-4;Dbxref=InterPro:IPR007865,PFAM:PF05195;Note=amp_n~peptidase m24b%2C x-pro dipeptidase/aminopeptidase p n-terminal;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83777 84998 . + . ID=id-GGE_1911-5;Note=multi-dom~HMMPanther:PTHR10804:SF17~xaa-pro dipeptidase~HMMPanther:PTHR10804~protease family m24 (methionyl aminopeptidase%2C aminopeptidase p)%3B label: PRK10879;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84185 84194 . + . ID=id-GGE_1911-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84257 84518 . + . ID=id-GGE_1911-7;Dbxref=InterPro:IPR000994;Note=superfamily:SSF55920~creatinase/aminopeptidase~peptidase m24%2C structural domain;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84269 84509 . + . ID=id-GGE_1911-8;Dbxref=InterPro:IPR000994;Note=Gene3D:3.90.230.10~peptidase m24%2C structural domain;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84269 84467 . + . ID=id-GGE_1911-9;Note=specific~superfamily%3B label: APP_MetAP superfamily;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84275 84437 . + . ID=id-GGE_1911-10;Dbxref=InterPro:IPR000994,PFAM:PF00557;Note=peptidase_m24~peptidase m24%2C structural domain;gbkey=misc_feature;gene=pepP;locus_tag=GGE_1911 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 83783 84776 . - . ID=id-AFQR01000036.1:83783..84776;Dbxref=InterPro:IPR001131;Note=PatternScan:PS00491~proline_peptidase~peptidase m24b%2C x-pro dipeptidase/aminopeptidase p%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 84130 84139 . - . ID=id-AFQR01000036.1:84130..84139;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 85138 85563 . + . ID=gene-GGE_1912;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=GGE_1912 GCA_000222085.2|AFQR01000036.1 Genbank CDS 85138 85563 . + 0 ID=cds-EGT79729.1;Parent=gene-GGE_1912;Dbxref=GeneID:1174913,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,NCBI_GP:EGT79729.1;Name=EGT79729.1;Ontology_term=GO:0006950;gbkey=CDS;gene=uspA;go_process=response to stress|0006950||;locus_tag=GGE_1912;product=Universal stress protein A;protein_id=EGT79729.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85138 85558 . + . ID=id-GGE_1912;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=uspA;locus_tag=GGE_1912 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85138 85552 . + . ID=id-GGE_1912-2;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=uspA;locus_tag=GGE_1912 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85138 85549 . + . ID=id-GGE_1912-3;Dbxref=InterPro:IPR006016,PFAM:PF00582;Note=usp~uspa;gbkey=misc_feature;gene=uspA;locus_tag=GGE_1912 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85150 85537 . + . ID=id-GGE_1912-4;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=uspA;locus_tag=GGE_1912 GCA_000222085.2|AFQR01000036.1 Genbank gene 85751 88375 . + . ID=gene-GGE_1913;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank CDS 85751 88375 . + 0 ID=cds-EGT79730.1;Parent=gene-GGE_1913;Dbxref=GeneID:205830061,InterPro:IPR002318,InterPro:IPR003156,InterPro:IPR012947,InterPro:IPR018162,InterPro:IPR018163,InterPro:IPR018164,InterPro:IPR018165,PFAM:PF01411,PFAM:PF02272,PFAM:PF07973,TIGRFAM:TIGR00344,NCBI_GP:EGT79730.1;Name=EGT79730.1;Ontology_term=GO:0006419,GO:0043039,GO:0006412,GO:0005737,GO:0005524,GO:0004813,GO:0016876,GO:0003676,GO:0000166;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,alanine-tRNA ligase activity|0004813||,ligase activity forming aminoacyl-tRNA and related compounds|0016876||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=alanyl-tRNA aminoacylation|0006419||,tRNA aminoacylation|0043039||,translation|0006412||;locus_tag=GGE_1913;product=Alanyl-tRNA synthetase;protein_id=EGT79730.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85751 88373 . + . ID=id-GGE_1913;Note=multi-dom~HMMPanther:PTHR11777:SF6~subfamily not named~HMMPanther:PTHR11777~family not named%3B label: alaS;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85751 86513 . + . ID=id-GGE_1913-2;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85757 87872 . + . ID=id-GGE_1913-3;Dbxref=InterPro:IPR018165;Note=ProfileScan:PS50860~aa_trna_ligase_ii_ala~alanyl-trna synthetase%2C class iic%2C core domain;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85763 86492 . + . ID=id-GGE_1913-4;Note=specific~superfamily%3B label: AlaRS_core;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85769 88295 . + . ID=id-GGE_1913-5;Dbxref=InterPro:IPR002318,TIGRFAM:TIGR00344;Note=alas: alanine--trna ligase~alanyl-trna synthetase%2C class iic;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85769 87401 . + . ID=id-GGE_1913-6;Dbxref=InterPro:IPR018164,PFAM:PF01411;Note=trna-synt_2c~alanyl-trna synthetase%2C class iic;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 87206 87215 . + . ID=id-GGE_1913-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=alaS;locus_tag=GGE_1913 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85787 86375 . - . ID=id-AFQR01000036.1:85787..86375;Dbxref=InterPro:IPR002318;Note=FPrintScan:PR00980~trnasynthala~alanyl-trna synthetase%2C class iic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85787 86333 . - . ID=id-AFQR01000036.1:85787..86333;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85787 85976 . - . ID=id-AFQR01000036.1:85787..85976;Dbxref=InterPro:IPR002318;Note=FPrintScan:PR00980~trnasynthala~alanyl-trna synthetase%2C class iic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85793 86666 . - . ID=id-AFQR01000036.1:85793..86666;Dbxref=InterPro:IPR002318;Note=FPrintScan:PR00980~trnasynthala~alanyl-trna synthetase%2C class iic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85793 86456 . - . ID=id-AFQR01000036.1:85793..86456;Dbxref=InterPro:IPR002318;Note=FPrintScan:PR00980~trnasynthala~alanyl-trna synthetase%2C class iic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85799 87761 . - . ID=id-AFQR01000036.1:85799..87761;Note=Gene3D:3.30.980.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85802 86594 . - . ID=id-AFQR01000036.1:85802..86594;Dbxref=InterPro:IPR002318;Note=FPrintScan:PR00980~trnasynthala~alanyl-trna synthetase%2C class iic;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85859 87902 . - . ID=id-AFQR01000036.1:85859..87902;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85883 87707 . - . ID=id-AFQR01000036.1:85883..87707;Dbxref=InterPro:IPR012947,PFAM:PF07973;Note=superfamily~trna_sad~threonyl/alanyl trna synthetase%2C sad%3B label: tRNA_SAD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85952 88151 . - . ID=id-AFQR01000036.1:85952..88151;Dbxref=InterPro:IPR003156,PFAM:PF02272;Note=dhha1~phosphoesterase%2C dhha1;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 85964 88145 . - . ID=id-AFQR01000036.1:85964..88145;Note=superfamily%3B label: DHHA1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 86105 86558 . - . ID=id-AFQR01000036.1:86105..86558;Note=superfamily%3B label: SAF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 86129 86168 . - . ID=id-AFQR01000036.1:86129..86168;Note=Gene3D:3.30.930.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 86267 87404 . - . ID=id-AFQR01000036.1:86267..87404;Dbxref=InterPro:IPR018163;Note=superfamily:SSF55186~thrrs/alars common domain~threonyl/alanyl trna synthetase%2C class ii-like%2C putative editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 86399 86516 . - . ID=id-AFQR01000036.1:86399..86516;Dbxref=InterPro:IPR018162;Note=superfamily:SSF101353~putative anticodon-binding domain of alanyl-trna synthetase (alars)~alanyl-trna synthetase%2C class iic%2C anti-codon-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 87157 87166 . - . ID=id-AFQR01000036.1:87157..87166;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 88453 88644 . + . ID=gene-GGE_1914;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank CDS 88453 88644 . + 0 ID=cds-EGT79731.1;Parent=gene-GGE_1914;Dbxref=InterPro:IPR003751,PFAM:PF02599,TIGRFAM:TIGR00202,NCBI_GP:EGT79731.1;Name=EGT79731.1;Ontology_term=GO:0006402,GO:0006109,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||;go_process=mRNA catabolic process|0006402||,regulation of carbohydrate metabolic process|0006109||;locus_tag=GGE_1914;product=Carbon storage regulator;protein_id=EGT79731.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88453 88642 . + . ID=id-GGE_1914;Dbxref=InterPro:IPR003751,TIGRFAM:TIGR00202;Note=superfamily~csra: carbon storage regulator~carbon storage regulator%3B label: CsrA superfamily;gbkey=misc_feature;gene=csrA;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88453 88636 . + . ID=id-GGE_1914-2;Dbxref=InterPro:IPR003751;Note=HAMAP:MF_00167~csra~carbon storage regulator;gbkey=misc_feature;gene=csrA;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88453 88618 . + . ID=id-GGE_1914-3;Note=superfamily:SSF117130~csra-like;gbkey=misc_feature;gene=csrA;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88453 88612 . + . ID=id-GGE_1914-4;Dbxref=InterPro:IPR003751,PFAM:PF02599;Note=csra~carbon storage regulator;gbkey=misc_feature;gene=csrA;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88453 88597 . + . ID=id-GGE_1914-5;Dbxref=InterPro:IPR003751;Note=BlastProDom:PD009007~csra_haein_p44879~carbon storage regulator;gbkey=misc_feature;gene=csrA;locus_tag=GGE_1914 GCA_000222085.2|AFQR01000036.1 Genbank gene 88668 89555 . + . ID=gene-GGE_1915;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank CDS 88668 89555 . + 0 ID=cds-EGT79732.1;Parent=gene-GGE_1915;Dbxref=GeneID:1169833,InterPro:IPR005771,InterPro:IPR005835,PFAM:PF00483,TIGRFAM:TIGR01099,NCBI_GP:EGT79732.1;Name=EGT79732.1;Ontology_term=GO:0006011,GO:0009058,GO:0003983,GO:0016779;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||,nucleotidyltransferase activity|0016779||;go_process=UDP-glucose metabolic process|0006011||,biosynthetic process|0009058||;locus_tag=GGE_1915;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=EGT79732.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88668 89511 . + . ID=id-GGE_1915;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88668 89496 . + . ID=id-GGE_1915-2;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88668 89487 . + . ID=id-GGE_1915-3;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88668 89475 . + . ID=id-GGE_1915-4;Dbxref=InterPro:IPR005771,TIGRFAM:TIGR01099;Note=galu: utp-glucose-1-phosphate uridylyltransf~utp--glucose-1-phosphate uridylyltransferase%2C bacterial/archaeal type;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88674 89523 . + . ID=id-GGE_1915-5;Note=HMMPanther:PTHR22572:SF14~glucose-1-phosphate uridylyltransferase~HMMPanther:PTHR22572~family not named;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 88674 89433 . + . ID=id-GGE_1915-6;Dbxref=InterPro:IPR005835,PFAM:PF00483;Note=ntp_transferase~nucleotidyl transferase;gbkey=misc_feature;gene=galU;locus_tag=GGE_1915 GCA_000222085.2|AFQR01000036.1 Genbank gene 89690 91063 . + . ID=gene-GGE_1916;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank CDS 89690 91063 . + 0 ID=cds-EGT79733.1;Parent=gene-GGE_1916;Dbxref=GeneID:166217293,InterPro:IPR000362,InterPro:IPR003031,InterPro:IPR008948,InterPro:IPR009049,InterPro:IPR020557,InterPro:IPR022761,PFAM:PF00206,TIGRFAM:TIGR00838,NCBI_GP:EGT79733.1;Name=EGT79733.1;Ontology_term=GO:0042450,GO:0004056,GO:0003824;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||,catalytic activity|0003824||;go_process=arginine biosynthetic process via ornithine|0042450||;locus_tag=GGE_1916;product=Argininosuccinate lyase;protein_id=EGT79733.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89690 91055 . + . ID=id-GGE_1916;Note=multi-dom%3B label: PRK04833;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89696 91049 . + . ID=id-GGE_1916-2;Dbxref=InterPro:IPR009049;Note=HAMAP:MF_00006~arg_succ_lyase~argininosuccinate lyase;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89699 91055 . + . ID=id-GGE_1916-3;Dbxref=InterPro:IPR008948,InterPro:IPR009049,TIGRFAM:TIGR00838;Note=argh: argininosuccinate lyase~argininosuccinate lyase~superfamily:SSF48557~l-aspartase-like~l-aspartase-like;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89699 91049 . + . ID=id-GGE_1916-4;Dbxref=InterPro:IPR009049;Note=HMMPanther:PTHR11444:SF3~argininosuccinate lyase~argininosuccinate lyase~HMMPanther:PTHR11444~family not named;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89708 90578 . + . ID=id-GGE_1916-5;Dbxref=InterPro:IPR022761,PFAM:PF00206;Note=lyase_1~lyase 1;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89756 90995 . + . ID=id-GGE_1916-6;Note=specific~superfamily%3B label: Argininosuccinate_lyase;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 90014 90491 . + . ID=id-GGE_1916-7;Note=Gene3D:1.20.200.10;gbkey=misc_feature;gene=argH;locus_tag=GGE_1916 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89720 90518 . - . ID=id-AFQR01000036.1:89720..90518;Dbxref=InterPro:IPR020557;Note=PatternScan:PS00163~fumarate_lyases~fumarate lyase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89741 90518 . - . ID=id-AFQR01000036.1:89741..90518;Dbxref=InterPro:IPR000362,InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin~FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89741 90272 . - . ID=id-AFQR01000036.1:89741..90272;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89747 90134 . - . ID=id-AFQR01000036.1:89747..90134;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89747 89999 . - . ID=id-AFQR01000036.1:89747..89999;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89750 90623 . - . ID=id-AFQR01000036.1:89750..90623;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89753 90119 . - . ID=id-AFQR01000036.1:89753..90119;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89756 90065 . - . ID=id-AFQR01000036.1:89756..90065;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89759 89996 . - . ID=id-AFQR01000036.1:89759..89996;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89765 90386 . - . ID=id-AFQR01000036.1:89765..90386;Dbxref=InterPro:IPR003031;Note=FPrintScan:PR00145~argsuclyase~delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89774 90386 . - . ID=id-AFQR01000036.1:89774..90386;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 89864 90815 . - . ID=id-AFQR01000036.1:89864..90815;Note=Gene3D:1.10.40.30;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91187 91196 . - . ID=id-AFQR01000036.1:91187..91196;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 91220 92101 . + . ID=gene-GGE_1917;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank CDS 91220 92101 . + 0 ID=cds-EGT79734.1;Parent=gene-GGE_1917;Dbxref=GeneID:166220537,InterPro:IPR000397,InterPro:IPR016153,InterPro:IPR016154,InterPro:IPR023212,PFAM:PF01430,PIR:PIRSF005261,NCBI_GP:EGT79734.1;Name=EGT79734.1;Ontology_term=GO:0006457,GO:0005737,GO:0051082;gbkey=CDS;gene=hslO;go_component=cytoplasm|0005737||;go_function=unfolded protein binding|0051082||;go_process=protein folding|0006457||;locus_tag=GGE_1917;product=33 kDa chaperonin;protein_id=EGT79734.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91220 92096 . + . ID=id-GGE_1917;Dbxref=InterPro:IPR000397,PIR:PIRSF005261;Note=chaperonin%2C hsp33 type~heat shock protein hsp33 protein;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91247 91745 . + . ID=id-GGE_1917-2;Dbxref=InterPro:IPR016153;Note=Gene3D:3.55.30.10~heat shock protein hsp33 protein;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91250 92069 . + . ID=id-GGE_1917-3;Note=multi-dom%3B label: hslO;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91253 92066 . + . ID=id-GGE_1917-4;Dbxref=InterPro:IPR000397;Note=HAMAP:MF_00117~hslo~heat shock protein hsp33 protein;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91253 92033 . + . ID=id-GGE_1917-5;Dbxref=InterPro:IPR000397,PFAM:PF01430;Note=hsp33~heat shock protein hsp33 protein;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91253 91907 . + . ID=id-GGE_1917-6;Dbxref=InterPro:IPR016153;Note=superfamily:SSF64397~hsp33 domain~heat shock protein hsp33 protein;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91262 92024 . + . ID=id-GGE_1917-7;Note=specific~superfamily%3B label: Hsp33;gbkey=misc_feature;gene=hslO;locus_tag=GGE_1917 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91361 91778 . - . ID=id-AFQR01000036.1:91361..91778;Dbxref=InterPro:IPR023212;Note=Gene3D:1.10.287.480~heat shock protein hsp33%2C helix hairpin bin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91391 91919 . - . ID=id-AFQR01000036.1:91391..91919;Dbxref=InterPro:IPR016154;Note=Gene3D:3.90.1280.10~heat shock protein hsp33 protein;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 91403 91913 . - . ID=id-AFQR01000036.1:91403..91913;Note=superfamily:SSF118352~hsp33 redox switch-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 92275 93891 . + . ID=gene-GGE_1918;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank CDS 92275 93891 . + 0 ID=cds-EGT79735.1;Parent=gene-GGE_1918;Dbxref=GeneID:166221806,InterPro:IPR001272,InterPro:IPR008210,InterPro:IPR013035,InterPro:IPR015994,PFAM:PF01293,PIR:PIRSF006294,TIGRFAM:TIGR00224,NCBI_GP:EGT79735.1;Name=EGT79735.1;Ontology_term=GO:0006094,GO:0005524,GO:0004612,GO:0004611,GO:0017076;gbkey=CDS;gene=pckA;go_function=ATP binding|0005524||,phosphoenolpyruvate carboxykinase (ATP) activity|0004612||,phosphoenolpyruvate carboxykinase activity|0004611||,purine nucleotide binding|0017076||;go_process=gluconeogenesis|0006094||;locus_tag=GGE_1918;product=Phosphoenolpyruvate carboxykinase ATP;protein_id=EGT79735.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92281 93886 . + . ID=id-GGE_1918;Dbxref=InterPro:IPR001272,PIR:PIRSF006294,TIGRFAM:TIGR00224;Note=phosphoenolpyruvate carboxykinase [atp]~phosphoenolpyruvate carboxykinase%2C atp-utilising~pcka: phosphoenolpyruvate carboxykinase (atp~phosphoenolpyruvate carboxykinase%2C atp-utilising;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92290 92938 . + . ID=id-GGE_1918-2;Dbxref=InterPro:IPR008210;Note=superfamily:SSF68923~pep carboxykinase n-terminal domain~phosphoenolpyruvate carboxykinase;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92320 93847 . + . ID=id-GGE_1918-3;Dbxref=InterPro:IPR001272;Note=HAMAP:MF_00453~pepck_atp~phosphoenolpyruvate carboxykinase%2C atp-utilising;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92332 93694 . + . ID=id-GGE_1918-4;Dbxref=InterPro:IPR001272,PFAM:PF01293;Note=pepck_atp~phosphoenolpyruvate carboxykinase%2C atp-utilising;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92335 93823 . + . ID=id-GGE_1918-5;Note=specific~superfamily%3B label: PEPCK_ATP;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92347 92881 . + . ID=id-GGE_1918-6;Dbxref=InterPro:IPR008210;Note=Gene3D:3.40.449.10~phosphoenolpyruvate carboxykinase;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92953 93214 . + . ID=id-GGE_1918-7;Note=superfamily:SSF53795~pep carboxykinase-like;gbkey=misc_feature;gene=pckA;locus_tag=GGE_1918 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92311 93013 . - . ID=id-AFQR01000036.1:92311..93013;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92323 93064 . - . ID=id-AFQR01000036.1:92323..93064;Dbxref=InterPro:IPR015994;Note=PatternScan:PS00532~pepck_atp~phosphoenolpyruvate carboxykinase (atp)%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 92833 93319 . - . ID=id-AFQR01000036.1:92833..93319;Dbxref=InterPro:IPR013035;Note=Gene3D:3.90.228.20~phosphoenolpyruvate carboxykinase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 93912 93921 . - . ID=id-AFQR01000036.1:93912..93921;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 94042 94599 . + . ID=gene-GGE_1919;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank CDS 94042 94599 . + 0 ID=cds-EGT79736.1;Parent=gene-GGE_1919;Dbxref=GeneID:1173172,InterPro:IPR002661,InterPro:IPR023584,PFAM:PF01765,TIGRFAM:TIGR00496,NCBI_GP:EGT79736.1;Name=EGT79736.1;Ontology_term=GO:0006412;gbkey=CDS;gene=frr;go_process=translation|0006412||;locus_tag=GGE_1919;product=Ribosome-recycling factor;protein_id=EGT79736.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94042 94597 . + . ID=id-GGE_1919;Dbxref=InterPro:IPR002661,InterPro:IPR023584;Note=HMMPanther:PTHR20982~family not named~ribosome recycling factor~superfamily:SSF55194~ribosome recycling factor%2C rrf~ribosome recycling factor domain;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94051 94591 . + . ID=id-GGE_1919-2;Dbxref=InterPro:IPR002661;Note=HAMAP:MF_00040~rrf~ribosome recycling factor;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94057 94579 . + . ID=id-GGE_1919-3;Note=specific~superfamily%3B label: RRF;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94072 94570 . + . ID=id-GGE_1919-4;Dbxref=InterPro:IPR002661,TIGRFAM:TIGR00496;Note=frr: ribosome recycling factor~ribosome recycling factor;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94102 94534 . + . ID=id-GGE_1919-5;Dbxref=InterPro:IPR023584,PFAM:PF01765;Note=rrf~ribosome recycling factor domain;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94243 94396 . + . ID=id-GGE_1919-6;Note=Gene3D:1.10.132.20;gbkey=misc_feature;gene=frr;locus_tag=GGE_1919 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94150 94438 . - . ID=id-AFQR01000036.1:94150..94438;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94689 94698 . + . ID=id-AFQR01000036.1:94689..94698;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 94709 95902 . + . ID=gene-GGE_1920;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank CDS 94709 95902 . + 0 ID=cds-EGT79737.1;Parent=gene-GGE_1920;Dbxref=GeneID:81170448,InterPro:IPR003821,InterPro:IPR013512,InterPro:IPR013644,InterPro:IPR016040,PFAM:PF02670,PFAM:PF08436,PIR:PIRSF006205,TIGRFAM:TIGR00243,NCBI_GP:EGT79737.1;Name=EGT79737.1;Ontology_term=GO:0008299,GO:0008152,GO:0055114,GO:0030604,GO:0005488,GO:0003824,GO:0046872;gbkey=CDS;gene=dxr;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||,binding|0005488||,catalytic activity|0003824||,metal ion binding|0046872||;go_process=isoprenoid biosynthetic process|0008299||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1920;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=EGT79737.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94709 95900 . + . ID=id-GGE_1920;Dbxref=InterPro:IPR003821,TIGRFAM:TIGR00243;Note=dxr: 1-deoxy-d-xylulose 5-phosphate reductoi~1-deoxy-d-xylulose 5-phosphate reductoisomerase;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94715 95162 . + . ID=id-GGE_1920-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain~superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94718 95894 . + . ID=id-GGE_1920-3;Dbxref=InterPro:IPR003821,PIR:PIRSF006205;Note=1-deoxy-d-xylulose 5-phosphate reductoisomerase~1-deoxy-d-xylulose 5-phosphate reductoisomerase;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94718 95888 . + . ID=id-GGE_1920-4;Note=multi-dom%3B label: PRK05447;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94727 95876 . + . ID=id-GGE_1920-5;Dbxref=InterPro:IPR003821;Note=HAMAP:MF_00183~dxp_reductoisom~1-deoxy-d-xylulose 5-phosphate reductoisomerase;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94727 95096 . + . ID=id-GGE_1920-6;Dbxref=InterPro:IPR013512,PFAM:PF02670;Note=superfamily~dxp_reductoisom~1-deoxy-d-xylulose 5-phosphate reductoisomerase%3B label: DXP_reductoisom superfamily;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95093 95156 . + . ID=id-GGE_1920-7;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature;gene=dxr;locus_tag=GGE_1920 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94863 94872 . - . ID=id-AFQR01000036.1:94863..94872;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94991 95153 . - . ID=id-AFQR01000036.1:94991..95153;Dbxref=InterPro:IPR013644,PFAM:PF08436;Note=superfamily~dxp_redisom_c~1-deoxy-d-xylulose 5-phosphate reductoisomerase%3B label: DXP_redisom_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 94994 95618 . - . ID=id-AFQR01000036.1:94994..95618;Note=superfamily:SSF69055~1-deoxy-d-xylulose-5-phosphate reductoisomerase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95576 95585 . - . ID=id-AFQR01000036.1:95576..95585;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 95934 96743 . - . ID=gene-GGE_1921;Name=GGE_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1921 GCA_000222085.2|AFQR01000036.1 Genbank CDS 95934 96743 . - 0 ID=cds-EGT79738.1;Parent=gene-GGE_1921;Dbxref=GeneID:301169525,InterPro:IPR002781,PFAM:PF01925,NCBI_GP:EGT79738.1;Name=EGT79738.1;Note=CBW29126;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_1921;product=Putative permease;protein_id=EGT79738.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95934 96363 . - . ID=id-GGE_1921;Note=superfamily%3B label: COG0730 superfamily;gbkey=misc_feature;locus_tag=GGE_1921 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95955 96003 . - . ID=id-GGE_1921-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1921 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95961 96693 . - . ID=id-GGE_1921-3;Note=multi-dom%3B label: TauE;gbkey=misc_feature;locus_tag=GGE_1921 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95964 96690 . - . ID=id-GGE_1921-4;Dbxref=InterPro:IPR002781,PFAM:PF01925;Note=taue~protein of unknown function duf81;gbkey=misc_feature;locus_tag=GGE_1921 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95982 96375 . + . ID=id-AFQR01000036.1:95982..96375;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95991 96477 . + . ID=id-AFQR01000036.1:95991..96477;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95994 96681 . + . ID=id-AFQR01000036.1:95994..96681;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 95994 96171 . + . ID=id-AFQR01000036.1:95994..96171;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96003 96570 . + . ID=id-AFQR01000036.1:96003..96570;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96003 96465 . + . ID=id-AFQR01000036.1:96003..96465;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96003 96369 . + . ID=id-AFQR01000036.1:96003..96369;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96003 96240 . + . ID=id-AFQR01000036.1:96003..96240;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96003 96066 . + . ID=id-AFQR01000036.1:96003..96066;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 96872 97921 . + . ID=gene-GGE_1922;Name=GGE_1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank CDS 96872 97921 . + 0 ID=cds-EGT79739.1;Parent=gene-GGE_1922;Dbxref=GeneID:145632164,InterPro:IPR007197,PFAM:PF04055,NCBI_GP:EGT79739.1;Name=EGT79739.1;Note=ZP_01787899;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1922;product=putative radical SAM enzyme;protein_id=EGT79739.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96920 97364 . + . ID=id-GGE_1922;Note=superfamily%3B label: Radical_SAM superfamily;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96920 97361 . + . ID=id-GGE_1922-2;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96923 97757 . + . ID=id-GGE_1922-3;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96980 97805 . + . ID=id-GGE_1922-4;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 96980 97409 . + . ID=id-GGE_1922-5;Note=superfamily%3B label: Radical_SAM superfamily;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97061 97388 . + . ID=id-GGE_1922-6;Note=Gene3D:3.80.30.10;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97061 97280 . + . ID=id-GGE_1922-7;Note=Gene3D:3.80.30.10;gbkey=misc_feature;locus_tag=GGE_1922 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97067 97622 . - . ID=id-AFQR01000036.1:97067..97622;Note=superfamily%3B label: rSAM_more_4Fe4S superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97142 97358 . - . ID=id-AFQR01000036.1:97142..97358;Note=BlastProDom:PD968187~q30ks2_canfa_q30ks2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97175 97622 . - . ID=id-AFQR01000036.1:97175..97622;Note=superfamily%3B label: rSAM_more_4Fe4S superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 97250 97358 . - . ID=id-AFQR01000036.1:97250..97358;Note=BlastProDom:PD968187~q30ks2_canfa_q30ks2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 98078 98674 . + . ID=gene-GGE_1923;Name=GGE_1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank CDS 98078 98674 . + 0 ID=cds-EGT79740.1;Parent=gene-GGE_1923;Dbxref=GeneID:68249400,InterPro:IPR000595,InterPro:IPR011991,InterPro:IPR014710,InterPro:IPR018490,PFAM:PF00027,NCBI_GP:EGT79740.1;Name=EGT79740.1;Note=YP_248512;gbkey=CDS;locus_tag=GGE_1923;product=putative cAMP-binding protein;protein_id=EGT79740.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98105 98462 . + . ID=id-GGE_1923;Dbxref=InterPro:IPR018490;Note=superfamily:SSF51206~camp-binding domain-like~cyclic nucleotide-binding-like;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98108 98453 . + . ID=id-GGE_1923-2;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98123 98384 . + . ID=id-GGE_1923-3;Note=specific~superfamily%3B label: CAP_ED;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98132 98315 . + . ID=id-GGE_1923-4;Note=HMMPanther:PTHR11635~family not named;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98135 98237 . + . ID=id-GGE_1923-5;Dbxref=InterPro:IPR000595;Note=ProfileScan:PS50042~cnmp_binding_3~cyclic nucleotide-binding domain;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98141 98345 . + . ID=id-GGE_1923-6;Dbxref=InterPro:IPR000595,PFAM:PF00027;Note=cnmp_binding~cyclic nucleotide-binding domain;gbkey=misc_feature;locus_tag=GGE_1923 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98204 98543 . - . ID=id-AFQR01000036.1:98204..98543;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98252 98498 . - . ID=id-AFQR01000036.1:98252..98498;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98264 98489 . - . ID=id-AFQR01000036.1:98264..98489;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98744 99474 . + . ID=id-GeneID:1841333-4;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 98864 99328 . - . ID=gene-GGE_1924;Name=GGE_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1924 GCA_000222085.2|AFQR01000036.1 Genbank CDS 98864 99328 . - 0 ID=cds-EGT79741.1;Parent=gene-GGE_1924;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT79741.1;Name=EGT79741.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1924;product=transposase like protein;protein_id=EGT79741.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98879 99257 . - . ID=id-GGE_1924;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1924 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98882 99257 . - . ID=id-GGE_1924-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1924 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98909 99221 . - . ID=id-GGE_1924-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1924 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 98912 99218 . - . ID=id-GGE_1924-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1924 GCA_000222085.2|AFQR01000036.1 Genbank gene 99506 101221 . - . ID=gene-GGE_1925;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank CDS 99506 101221 . - 0 ID=cds-EGT79742.1;Parent=gene-GGE_1925;Dbxref=GeneID:166980127,InterPro:IPR002314,InterPro:IPR002316,InterPro:IPR004154,InterPro:IPR004500,InterPro:IPR006195,InterPro:IPR007214,PFAM:PF00587,PFAM:PF03129,PFAM:PF04073,TIGRFAM:TIGR00409,NCBI_GP:EGT79742.1;Name=EGT79742.1;Ontology_term=GO:0006433,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0000166,GO:0004827;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,proline-tRNA ligase activity|0004827||;go_process=prolyl-tRNA aminoacylation|0006433||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1925;product=Prolyl-tRNA synthetase;protein_id=EGT79742.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99506 101216 . - . ID=id-GGE_1925;Dbxref=InterPro:IPR004500;Note=multi-dom~HAMAP:MF_01569~pro_trna_synth_type1~prolyl-trna synthetase%2C class iia%2C bacterial%3B label: PRK09194;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99506 101210 . - . ID=id-GGE_1925-2;Dbxref=InterPro:IPR004500,TIGRFAM:TIGR00409;Note=pros_fam_ii: prolyl-trna synthetase~prolyl-trna synthetase%2C class iia%2C bacterial;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99533 100913 . - . ID=id-GGE_1925-3;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99557 100103 . - . ID=id-GGE_1925-4;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99569 101150 . - . ID=id-GGE_1925-5;Note=HMMPanther:PTHR11451:SF3~prolyl-trna synthetase~HMMPanther:PTHR11451~family not named;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99620 100793 . - . ID=id-GGE_1925-6;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99659 99998 . - . ID=id-GGE_1925-7;Dbxref=InterPro:IPR002314,PFAM:PF00587;Note=trna-synt_2b~aminoacyl-trna synthetase%2C class ii (g/ h/ p/ s)%2C conserved domain;gbkey=misc_feature;gene=proS;locus_tag=GGE_1925 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99533 99908 . + . ID=id-AFQR01000036.1:99533..99908;Dbxref=InterPro:IPR002316;Note=FPrintScan:PR01046~trnasynthpro~prolyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99542 99938 . + . ID=id-AFQR01000036.1:99542..99938;Dbxref=InterPro:IPR002316;Note=FPrintScan:PR01046~trnasynthpro~prolyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99542 99818 . + . ID=id-AFQR01000036.1:99542..99818;Dbxref=InterPro:IPR002316;Note=FPrintScan:PR01046~trnasynthpro~prolyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99563 99710 . + . ID=id-AFQR01000036.1:99563..99710;Dbxref=InterPro:IPR002316;Note=FPrintScan:PR01046~trnasynthpro~prolyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99674 100709 . + . ID=id-AFQR01000036.1:99674..100709;Note=superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99725 99734 . + . ID=id-AFQR01000036.1:99725..99734;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99743 100670 . + . ID=id-AFQR01000036.1:99743..100670;Note=Gene3D:3.30.930.10;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99788 100931 . + . ID=id-AFQR01000036.1:99788..100931;Dbxref=InterPro:IPR004154,PFAM:PF03129;Note=hgtp_anticodon~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99791 100922 . + . ID=id-AFQR01000036.1:99791..100922;Note=specific~superfamily%3B label: HGTP_anticodon superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99809 100913 . + . ID=id-AFQR01000036.1:99809..100913;Dbxref=InterPro:IPR004154;Note=Gene3D:3.40.50.800~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99815 100913 . + . ID=id-AFQR01000036.1:99815..100913;Dbxref=InterPro:IPR004154;Note=superfamily:SSF52954~class ii aars abd-related~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99863 100274 . + . ID=id-AFQR01000036.1:99863..100274;Dbxref=InterPro:IPR007214,PFAM:PF04073;Note=ybak~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99863 100235 . + . ID=id-AFQR01000036.1:99863..100235;Dbxref=InterPro:IPR007214;Note=Gene3D:3.90.960.10~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 99986 100184 . + . ID=id-AFQR01000036.1:99986..100184;Note=specific~superfamily%3B label: ProRS-INS;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 100019 100160 . + . ID=id-AFQR01000036.1:100019..100160;Dbxref=InterPro:IPR007214;Note=superfamily:SSF55826~ybak/prors associated domain~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101289 101298 . - . ID=id-AFQR01000036.1:101289..101298;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 101306 103189 . - . ID=gene-GGE_1926;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank CDS 101306 103189 . - 0 ID=cds-EGT79743.1;Parent=gene-GGE_1926;Dbxref=GeneID:2500112,InterPro:IPR001650,InterPro:IPR002121,InterPro:IPR004589,InterPro:IPR006293,InterPro:IPR010997,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR018982,PFAM:PF00270,PFAM:PF00271,PFAM:PF00570,PFAM:PF09382,TIGRFAM:TIGR00614,TIGRFAM:TIGR01389,NCBI_GP:EGT79743.1;Name=EGT79743.1;Ontology_term=GO:0006310,GO:0006281,GO:0006260,GO:0009432,GO:0044237,GO:0005622,GO:0005524,GO:0043140,GO:0004003,GO:0008026,GO:0003824,GO:0004386,GO:0003676,GO:0000166;gbkey=CDS;gene=recQ;go_component=intracellular|0005622||;go_function=ATP binding|0005524||,ATP-dependent 3'-5' DNA helicase activity|0043140||,ATP-dependent DNA helicase activity|0004003||,ATP-dependent helicase activity|0008026||,catalytic activity|0003824||,helicase activity|0004386||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=DNA recombination|0006310||,DNA repair|0006281||,DNA replication|0006260||,SOS response|0009432||,cellular metabolic process|0044237||;locus_tag=GGE_1926;product=ATP-dependent DNA helicase recQ;protein_id=EGT79743.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101369 101891 . - . ID=id-GGE_1926;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101372 103091 . - . ID=id-GGE_1926-2;Note=multi-dom%3B label: PRK11057;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101378 103118 . - . ID=id-GGE_1926-3;Dbxref=InterPro:IPR004589;Note=HMMPanther:PTHR13710:SF11~dna helicase recq~HMMPanther:PTHR13710~family not named~dna helicase%2C atp-dependent%2C recq type;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101378 103085 . - . ID=id-GGE_1926-4;Dbxref=InterPro:IPR006293,TIGRFAM:TIGR01389;Note=recq: atp-dependent dna helicase recq~dna helicase%2C atp-dependent%2C recq type%2C bacterial;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101384 102656 . - . ID=id-GGE_1926-5;Dbxref=InterPro:IPR004589,TIGRFAM:TIGR00614;Note=recq_fam: atp-dependent dna helicase%2C recq f~dna helicase%2C atp-dependent%2C recq type;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101396 101843 . - . ID=id-GGE_1926-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101423 101786 . - . ID=id-GGE_1926-7;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101441 101813 . - . ID=id-GGE_1926-8;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101462 101735 . - . ID=id-GGE_1926-9;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101876 102152 . - . ID=id-GGE_1926-10;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recQ;locus_tag=GGE_1926 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101507 102947 . + . ID=id-AFQR01000036.1:101507..102947;Dbxref=InterPro:IPR002121,PFAM:PF00570;Note=hrdc~helicase/rnase d c-terminal%2C hrdc domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101528 102935 . + . ID=id-AFQR01000036.1:101528..102935;Note=superfamily%3B label: HRDC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101531 102932 . + . ID=id-AFQR01000036.1:101531..102932;Dbxref=InterPro:IPR010997;Note=superfamily:SSF47819~hrdc-like~hrdc-like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101534 102104 . + . ID=id-AFQR01000036.1:101534..102104;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101549 102935 . + . ID=id-AFQR01000036.1:101549..102935;Dbxref=InterPro:IPR002121;Note=ProfileScan:PS50967~hrdc~helicase/rnase d c-terminal%2C hrdc domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101585 102572 . + . ID=id-AFQR01000036.1:101585..102572;Note=superfamily%3B label: RQC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101615 102572 . + . ID=id-AFQR01000036.1:101615..102572;Dbxref=InterPro:IPR018982,PFAM:PF09382;Note=rqc~rqc domain;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101681 101984 . + . ID=id-AFQR01000036.1:101681..101984;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101723 101960 . + . ID=id-AFQR01000036.1:101723..101960;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 101744 102017 . + . ID=id-AFQR01000036.1:101744..102017;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103113 103122 . + . ID=id-AFQR01000036.1:103113..103122;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 103167 103472 . - . ID=gene-GGE_1927;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=GGE_1927 GCA_000222085.2|AFQR01000036.1 Genbank CDS 103167 103472 . - 0 ID=cds-EGT79744.1;Parent=gene-GGE_1927;Dbxref=GeneID:6014767,InterPro:IPR002908,InterPro:IPR020895,PFAM:PF01491,TIGRFAM:TIGR03421,NCBI_GP:EGT79744.1;Name=EGT79744.1;gbkey=CDS;gene=cyaY;locus_tag=GGE_1927;product=Protein CyaY;protein_id=EGT79744.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103167 103470 . - . ID=id-GGE_1927;Dbxref=InterPro:IPR002908,PFAM:PF01491;Note=specific~superfamily~frataxin_cyay~frataxin-like~HAMAP:MF_00142~cyay~frataxin-like~superfamily:SSF55387~frataxin/nqo15-like~frataxin-like%3B label: Frataxin;gbkey=misc_feature;gene=cyaY;locus_tag=GGE_1927 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103167 103464 . - . ID=id-GGE_1927-2;Dbxref=InterPro:IPR002908;Note=ProfileScan:PS50810~frataxin_2~frataxin-like~Gene3D:3.30.920.10~frataxin-like;gbkey=misc_feature;gene=cyaY;locus_tag=GGE_1927 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103173 103467 . - . ID=id-GGE_1927-3;Dbxref=InterPro:IPR002908,TIGRFAM:TIGR03421;Note=fes_cyay: iron donor protein cyay~frataxin-like;gbkey=misc_feature;gene=cyaY;locus_tag=GGE_1927 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103212 103311 . + . ID=id-AFQR01000036.1:103212..103311;Dbxref=InterPro:IPR020895;Note=PatternScan:PS01344~frataxin_1~frataxin conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 103570 103686 . + . ID=gene-GGE_1928;Name=GGE_1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1928 GCA_000222085.2|AFQR01000036.1 Genbank CDS 103570 103686 . + 0 ID=cds-EGT79745.1;Parent=gene-GGE_1928;Dbxref=GeneID:68249327,NCBI_GP:EGT79745.1;Name=EGT79745.1;Note=YP_248439;gbkey=CDS;locus_tag=GGE_1928;product=putative lipoprotein;protein_id=EGT79745.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103570 103669 . + . ID=id-GGE_1928;Note=superfamily%3B label: COG5567 superfamily;gbkey=misc_feature;locus_tag=GGE_1928 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103570 103630 . + . ID=id-GGE_1928-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1928 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103591 103639 . + . ID=id-GGE_1928-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1928 GCA_000222085.2|AFQR01000036.1 Genbank gene 103730 104977 . + . ID=gene-GGE_1929;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank CDS 103730 104977 . + 0 ID=cds-EGT79746.1;Parent=gene-GGE_1929;Dbxref=GeneID:1169235,InterPro:IPR000183,InterPro:IPR002986,InterPro:IPR009006,InterPro:IPR022643,InterPro:IPR022644,InterPro:IPR022653,InterPro:IPR022657,PFAM:PF00278,PFAM:PF02784,TIGRFAM:TIGR01048,NCBI_GP:EGT79746.1;Name=EGT79746.1;Ontology_term=GO:0009089,GO:0003824,GO:0008836;gbkey=CDS;gene=lysA;go_function=catalytic activity|0003824||,diaminopimelate decarboxylase activity|0008836||;go_process=lysine biosynthetic process via diaminopimelate|0009089||;locus_tag=GGE_1929;product=Diaminopimelate decarboxylase;protein_id=EGT79746.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103730 104969 . + . ID=id-GGE_1929;Note=HMMPanther:PTHR11482:SF5~diaminopimelate decarboxylase~HMMPanther:PTHR11482~family not named;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103739 104963 . + . ID=id-GGE_1929-2;Note=multi-dom%3B label: lysA;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103742 104960 . + . ID=id-GGE_1929-3;Dbxref=InterPro:IPR002986,TIGRFAM:TIGR01048;Note=lysa: diaminopimelate decarboxylase~diaminopimelate decarboxylase;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103805 104831 . + . ID=id-GGE_1929-4;Note=specific~superfamily%3B label: PLPDE_III superfamily;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103808 104504 . + . ID=id-GGE_1929-5;Note=superfamily:SSF51419~plp-binding barrel;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103838 104471 . + . ID=id-GGE_1929-6;Dbxref=InterPro:IPR022644,PFAM:PF02784;Note=orn_arg_dec_n~orn/dap/arg decarboxylase 2;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103838 104423 . + . ID=id-GGE_1929-7;Note=Gene3D:3.20.20.10;gbkey=misc_feature;gene=lysA;locus_tag=GGE_1929 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103760 104222 . - . ID=id-AFQR01000036.1:103760..104222;Dbxref=InterPro:IPR002986;Note=FPrintScan:PR01181~dapdcrbxlase~diaminopimelate decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103769 103961 . - . ID=id-AFQR01000036.1:103769..103961;Dbxref=InterPro:IPR000183;Note=FPrintScan:PR01179~odadcrbxlase~ornithine/dap/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103772 104840 . - . ID=id-AFQR01000036.1:103772..104840;Dbxref=InterPro:IPR000183;Note=FPrintScan:PR01179~odadcrbxlase~ornithine/dap/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103772 104414 . - . ID=id-AFQR01000036.1:103772..104414;Dbxref=InterPro:IPR022657;Note=PatternScan:PS00879~odr_dc_2_2~orn/dap/arg decarboxylase 2%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103772 104300 . - . ID=id-AFQR01000036.1:103772..104300;Dbxref=InterPro:IPR000183;Note=FPrintScan:PR01179~odadcrbxlase~ornithine/dap/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103784 103955 . - . ID=id-AFQR01000036.1:103784..103955;Dbxref=InterPro:IPR002986;Note=FPrintScan:PR01181~dapdcrbxlase~diaminopimelate decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103787 104627 . - . ID=id-AFQR01000036.1:103787..104627;Dbxref=InterPro:IPR002986;Note=FPrintScan:PR01181~dapdcrbxlase~diaminopimelate decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103787 103901 . - . ID=id-AFQR01000036.1:103787..103901;Dbxref=InterPro:IPR000183,InterPro:IPR022653;Note=PatternScan:PS00878~odr_dc_2_1~orn/dap/arg decarboxylase 2%2C pyridoxal-phosphate binding site~FPrintScan:PR01179~odadcrbxlase~ornithine/dap/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103790 104543 . - . ID=id-AFQR01000036.1:103790..104543;Dbxref=InterPro:IPR000183;Note=FPrintScan:PR01179~odadcrbxlase~ornithine/dap/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 103799 104870 . - . ID=id-AFQR01000036.1:103799..104870;Dbxref=InterPro:IPR002986;Note=FPrintScan:PR01181~dapdcrbxlase~diaminopimelate decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 104048 104588 . - . ID=id-AFQR01000036.1:104048..104588;Dbxref=InterPro:IPR022643,PFAM:PF00278;Note=orn_dap_arg_dec~orn/dap/arg decarboxylase 2;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 104171 104531 . - . ID=id-AFQR01000036.1:104171..104531;Dbxref=InterPro:IPR009006;Note=Gene3D:2.40.37.10~alanine racemase/group iv decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 104213 104489 . - . ID=id-AFQR01000036.1:104213..104489;Dbxref=InterPro:IPR009006;Note=superfamily:SSF50621~alanine racemase c-terminal domain-like~alanine racemase/group iv decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 104708 104717 . - . ID=id-AFQR01000036.1:104708..104717;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 105174 105800 . + . ID=gene-GGE_1930;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank CDS 105174 105800 . + 0 ID=cds-EGT79747.1;Parent=gene-GGE_1930;Dbxref=GeneID:1171656,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,PFAM:PF00072,PFAM:PF00196,NCBI_GP:EGT79747.1;Name=EGT79747.1;Ontology_term=GO:0006355,GO:0000160,GO:0005622,GO:0003677,GO:0043565,GO:0003700,GO:0000156;gbkey=CDS;gene=narP;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||,two-component response regulator activity|0000156||;go_process=regulation of transcription DNA-dependent|0006355||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_1930;product=Nitrate/nitrite response regulator protein;protein_id=EGT79747.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105180 105792 . + . ID=id-GGE_1930;Note=HMMPanther:PTHR26402:SF164~subfamily not named~HMMPanther:PTHR26402~family not named;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105183 105612 . + . ID=id-GGE_1930-2;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105183 105588 . + . ID=id-GGE_1930-3;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105192 105777 . + . ID=id-GGE_1930-4;Note=multi-dom%3B label: PRK10403;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105192 105525 . + . ID=id-GGE_1930-5;Dbxref=InterPro:IPR001789;Note=ProfileScan:PS50110~response_regulatory~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105195 105510 . + . ID=id-GGE_1930-6;Dbxref=InterPro:IPR001789,PFAM:PF00072;Note=response_reg~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105198 105519 . + . ID=id-GGE_1930-7;Note=specific~superfamily%3B label: REC;gbkey=misc_feature;gene=narP;locus_tag=GGE_1930 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105213 105711 . - . ID=id-AFQR01000036.1:105213..105711;Dbxref=InterPro:IPR000792;Note=FPrintScan:PR00038~hthluxr~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105219 105621 . - . ID=id-AFQR01000036.1:105219..105621;Dbxref=InterPro:IPR000792;Note=FPrintScan:PR00038~hthluxr~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105225 105663 . - . ID=id-AFQR01000036.1:105225..105663;Dbxref=InterPro:IPR000792;Note=FPrintScan:PR00038~hthluxr~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105258 105663 . - . ID=id-AFQR01000036.1:105258..105663;Dbxref=InterPro:IPR000792;Note=PatternScan:PS00622~hth_luxr_1~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105342 105615 . - . ID=id-AFQR01000036.1:105342..105615;Dbxref=InterPro:IPR000792,PFAM:PF00196;Note=gere~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105345 105621 . - . ID=id-AFQR01000036.1:105345..105621;Note=specific~superfamily%3B label: LuxR_C_like;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105348 105621 . - . ID=id-AFQR01000036.1:105348..105621;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105372 105600 . - . ID=id-AFQR01000036.1:105372..105600;Dbxref=InterPro:IPR000792;Note=ProfileScan:PS50043~hth_luxr_2~transcription regulator luxr;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105420 105555 . - . ID=id-AFQR01000036.1:105420..105555;Dbxref=InterPro:IPR016032;Note=superfamily:SSF46894~c-terminal effector domain of the bipartite response regulators~signal transduction response regulator effector;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 105865 106305 . - . ID=gene-GGE_1931;Name=GGE_1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1931 GCA_000222085.2|AFQR01000036.1 Genbank CDS 105865 106305 . - 0 ID=cds-EGT79748.1;Parent=gene-GGE_1931;Dbxref=InterPro:IPR019617,PFAM:PF10675,NCBI_GP:EGT79748.1;Name=EGT79748.1;Note=HI_0725;gbkey=CDS;locus_tag=GGE_1931;product=hypothetical protein;protein_id=EGT79748.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105871 105934 . - . ID=id-GGE_1931;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1931 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105871 105910 . - . ID=id-GGE_1931-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1931 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105904 106231 . - . ID=id-GGE_1931-3;Dbxref=InterPro:IPR019617,PFAM:PF10675;Note=duf2489~domain of unknown function duf2489;gbkey=misc_feature;locus_tag=GGE_1931 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105976 106165 . - . ID=id-GGE_1931-4;Note=superfamily%3B label: DUF2489 superfamily;gbkey=misc_feature;locus_tag=GGE_1931 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105907 105934 . + . ID=id-AFQR01000036.1:105907..105934;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 105931 106171 . + . ID=id-AFQR01000036.1:105931..106171;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank gene 106309 106869 . - . ID=gene-GGE_1932;Name=GGE_1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1932 GCA_000222085.2|AFQR01000036.1 Genbank CDS 106309 106869 . - 0 ID=cds-EGT79749.1;Parent=gene-GGE_1932;Dbxref=GeneID:145637739,InterPro:IPR007336,PFAM:PF04220,NCBI_GP:EGT79749.1;Name=EGT79749.1;Note=ZP_01793391;gbkey=CDS;locus_tag=GGE_1932;product=putative der GTPase activator;protein_id=EGT79749.1;transl_table=11 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106309 106849 . - . ID=id-GGE_1932;Dbxref=InterPro:IPR007336;Note=HAMAP:MF_01058~gap_yihi~der gtpase activator;gbkey=misc_feature;locus_tag=GGE_1932 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106360 106723 . - . ID=id-GGE_1932-2;Note=superfamily%3B label: DUF414 superfamily;gbkey=misc_feature;locus_tag=GGE_1932 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106363 106792 . - . ID=id-GGE_1932-3;Dbxref=InterPro:IPR007336,PFAM:PF04220;Note=duf414~der gtpase activator;gbkey=misc_feature;locus_tag=GGE_1932 GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106351 106429 . + . ID=id-AFQR01000036.1:106351..106429;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106363 106777 . + . ID=id-AFQR01000036.1:106363..106777;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000036.1 Genbank sequence_feature 106369 106657 . + . ID=id-AFQR01000036.1:106369..106657;Note=seg;gbkey=misc_feature ##sequence-region AFQR01000035.1 1 33383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000035.1 Genbank region 1 33383 . + . ID=AFQR01000035.1:1..33383;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000035.1 Genbank gene 1613 2137 . - . ID=gene-GGE_1792;Name=GGE_1792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1792 GCA_000222085.2|AFQR01000035.1 Genbank CDS 1613 2137 . - 0 ID=cds-EGT79836.1;Parent=gene-GGE_1792;Dbxref=GeneID:9628636,PFAM:PF09684,NCBI_GP:EGT79836.1;Name=EGT79836.1;Note=NP_043501;gbkey=CDS;locus_tag=GGE_1792;product=Hypothetical protein;protein_id=EGT79836.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 1724 1886 . - . ID=id-GGE_1792;Dbxref=PFAM:PF09684;Note=tail_p2_i;gbkey=misc_feature;locus_tag=GGE_1792 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 1727 1823 . - . ID=id-GGE_1792-2;Note=superfamily%3B label: Tail_P2_I superfamily;gbkey=misc_feature;locus_tag=GGE_1792 GCA_000222085.2|AFQR01000035.1 Genbank gene 2147 3316 . - . ID=gene-GGE_1793;Name=GGE_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1793 GCA_000222085.2|AFQR01000035.1 Genbank CDS 2147 3316 . - 0 ID=cds-EGT79837.1;Parent=gene-GGE_1793;Dbxref=GeneID:145639488,InterPro:IPR006949,PFAM:PF04865,NCBI_GP:EGT79837.1;Name=EGT79837.1;Note=ZP_01795092;gbkey=CDS;locus_tag=GGE_1793;product=Hypothetical protein;protein_id=EGT79837.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 2159 2984 . - . ID=id-GGE_1793;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_1793 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 2381 2888 . - . ID=id-GGE_1793-2;Dbxref=InterPro:IPR006949,PFAM:PF04865;Note=baseplate_j~baseplate assembly protein j-like%2C predicted;gbkey=misc_feature;locus_tag=GGE_1793 GCA_000222085.2|AFQR01000035.1 Genbank gene 3309 3644 . - . ID=gene-GGE_1794;Name=GGE_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1794 GCA_000222085.2|AFQR01000035.1 Genbank CDS 3309 3644 . - 0 ID=cds-EGT79838.1;Parent=gene-GGE_1794;Dbxref=GeneID:9628634,InterPro:IPR019697,PFAM:PF10761,NCBI_GP:EGT79838.1;Name=EGT79838.1;Note=NP_043499;gbkey=CDS;locus_tag=GGE_1794;product=Hypothetical protein;protein_id=EGT79838.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3327 3600 . - . ID=id-GGE_1794;Dbxref=InterPro:IPR019697,PFAM:PF10761;Note=superfamily~duf2590~protein of unknown function duf2590%3B label: DUF2590 superfamily;gbkey=misc_feature;locus_tag=GGE_1794 GCA_000222085.2|AFQR01000035.1 Genbank gene 3648 5924 . - . ID=gene-GGE_1795;Name=GGE_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1795 GCA_000222085.2|AFQR01000035.1 Genbank CDS 3648 5924 . - 0 ID=cds-EGT79839.1;Parent=gene-GGE_1795;Dbxref=GeneID:319896508,InterPro:IPR010090,PFAM:PF10145,TIGRFAM:TIGR01760,NCBI_GP:EGT79839.1;Name=EGT79839.1;Note=YP_004134701;gbkey=CDS;locus_tag=GGE_1795;product=phage protein;protein_id=EGT79839.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3795 4683 . - . ID=id-GGE_1795;Dbxref=InterPro:IPR010090,TIGRFAM:TIGR01760;Note=tape_meas_tp901: phage tail tape meas~phage tail tape measure protein tp901%2C core region;gbkey=misc_feature;locus_tag=GGE_1795 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3906 4251 . - . ID=id-GGE_1795-2;Dbxref=InterPro:IPR010090,PFAM:PF10145;Note=multi-dom~phagemin_tail~phage tail tape measure protein tp901%2C core region%3B label: PhageMin_Tail;gbkey=misc_feature;locus_tag=GGE_1795 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 4377 4875 . - . ID=id-GGE_1795-3;Note=multi-dom%3B label: COG5412;gbkey=misc_feature;locus_tag=GGE_1795 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 5619 5628 . - . ID=id-GGE_1795-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1795 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3690 3768 . + . ID=id-AFQR01000035.1:3690..3768;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3693 4911 . + . ID=id-AFQR01000035.1:3693..4911;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3708 4221 . + . ID=id-AFQR01000035.1:3708..4221;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3717 5037 . + . ID=id-AFQR01000035.1:3717..5037;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3717 4950 . + . ID=id-AFQR01000035.1:3717..4950;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3717 4869 . + . ID=id-AFQR01000035.1:3717..4869;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 3717 4788 . + . ID=id-AFQR01000035.1:3717..4788;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 6113 6421 . - . ID=gene-GGE_1796;Name=GGE_1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1796 GCA_000222085.2|AFQR01000035.1 Genbank CDS 6113 6421 . - 0 ID=cds-EGT79840.1;Parent=gene-GGE_1796;Dbxref=GeneID:319896509,PFAM:PF10963,NCBI_GP:EGT79840.1;Name=EGT79840.1;Note=YP_004134702;gbkey=CDS;locus_tag=GGE_1796;product=phage protein;protein_id=EGT79840.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6170 6365 . - . ID=id-GGE_1796;Note=BlastProDom:PD068655~q775g2_9caud_q775g2;gbkey=misc_feature;locus_tag=GGE_1796 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6176 6359 . - . ID=id-GGE_1796-2;Dbxref=PFAM:PF10963;Note=superfamily~duf2765%3B label: DUF2765 superfamily;gbkey=misc_feature;locus_tag=GGE_1796 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6384 6426 . - . ID=id-AFQR01000035.1:6384..6426;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6417 6426 . + . ID=id-AFQR01000035.1:6417..6426;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 6607 6939 . - . ID=gene-GGE_1797;Name=GGE_1797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1797 GCA_000222085.2|AFQR01000035.1 Genbank CDS 6607 6939 . - 0 ID=cds-EGT79841.1;Parent=gene-GGE_1797;Dbxref=GeneID:17981841,NCBI_GP:EGT79841.1;Name=EGT79841.1;Note=NP_536832;gbkey=CDS;locus_tag=GGE_1797;product=orf25;protein_id=EGT79841.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6607 6661 . - . ID=id-GGE_1797;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1797 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6622 6667 . - . ID=id-GGE_1797-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1797 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6715 6769 . - . ID=id-GGE_1797-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1797 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6836 6845 . + . ID=id-AFQR01000035.1:6836..6845;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 6939 7499 . - . ID=gene-GGE_1798;Name=GGE_1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1798 GCA_000222085.2|AFQR01000035.1 Genbank CDS 6939 7499 . - 0 ID=cds-EGT79842.1;Parent=gene-GGE_1798;Dbxref=GeneID:145639494,InterPro:IPR002196,InterPro:IPR023346,InterPro:IPR023347,PFAM:PF00959,NCBI_GP:EGT79842.1;Name=EGT79842.1;Note=ZP_01795098;Ontology_term=GO:0016998,GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||;go_process=cell wall macromolecule catabolic process|0016998||,peptidoglycan catabolic process|0009253||;locus_tag=GGE_1798;product=phage lysozyme lysis protein;protein_id=EGT79842.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6960 7479 . - . ID=id-GGE_1798;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature;locus_tag=GGE_1798 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7041 7395 . - . ID=id-GGE_1798-2;Dbxref=InterPro:IPR023347;Note=Gene3D:1.10.530.40~lysozyme domain;gbkey=misc_feature;locus_tag=GGE_1798 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7044 7374 . - . ID=id-GGE_1798-3;Note=specific~superfamily%3B label: endolysin_autolysin;gbkey=misc_feature;locus_tag=GGE_1798 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7119 7296 . - . ID=id-GGE_1798-4;Dbxref=InterPro:IPR002196,PFAM:PF00959;Note=phage_lysozyme~glycoside hydrolase%2C family 24;gbkey=misc_feature;locus_tag=GGE_1798 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 6978 6978 . + . ID=id-AFQR01000035.1:6978..6978;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 7492 7725 . - . ID=gene-GGE_1799;Name=GGE_1799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1799 GCA_000222085.2|AFQR01000035.1 Genbank CDS 7492 7725 . - 0 ID=cds-EGT79843.1;Parent=gene-GGE_1799;Dbxref=GeneID:17981839,NCBI_GP:EGT79843.1;Name=EGT79843.1;Note=NP_536830;gbkey=CDS;locus_tag=GGE_1799;product=hol;protein_id=EGT79843.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7546 7573 . + . ID=id-AFQR01000035.1:7546..7573;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 7812 8264 . - . ID=gene-GGE_1800;Name=GGE_1800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1800 GCA_000222085.2|AFQR01000035.1 Genbank CDS 7812 8264 . - 0 ID=cds-EGT79844.1;Parent=gene-GGE_1800;Dbxref=GeneID:9628628,InterPro:IPR019708,PFAM:PF10772,NCBI_GP:EGT79844.1;Name=EGT79844.1;Note=NP_043493;gbkey=CDS;locus_tag=GGE_1800;product=Hypothetical protein;protein_id=EGT79844.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7833 8214 . - . ID=id-GGE_1800;Dbxref=InterPro:IPR019708,PFAM:PF10772;Note=superfamily~duf2597~protein of unknown function duf2597%3B label: DUF2597 superfamily;gbkey=misc_feature;locus_tag=GGE_1800 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 7830 8010 . + . ID=id-AFQR01000035.1:7830..8010;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 8268 9398 . - . ID=gene-GGE_1801;Name=GGE_1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1801 GCA_000222085.2|AFQR01000035.1 Genbank CDS 8268 9398 . - 0 ID=cds-EGT79845.1;Parent=gene-GGE_1801;Dbxref=GeneID:145639497,InterPro:IPR019694,PFAM:PF10758,NCBI_GP:EGT79845.1;Name=EGT79845.1;Note=ZP_01795101;gbkey=CDS;locus_tag=GGE_1801;product=Hypothetical protein;protein_id=EGT79845.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 8268 9378 . - . ID=id-GGE_1801;Dbxref=InterPro:IPR019694,PFAM:PF10758;Note=multi-dom~duf2586~protein of unknown function duf2586%2C tail sheath protein putative%3B label: DUF2586;gbkey=misc_feature;locus_tag=GGE_1801 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 8304 9081 . + . ID=id-AFQR01000035.1:8304..9081;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 9433 9591 . - . ID=gene-GGE_1802;Name=GGE_1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1802 GCA_000222085.2|AFQR01000035.1 Genbank CDS 9433 9591 . - 0 ID=cds-EGT79846.1;Parent=gene-GGE_1802;Dbxref=GeneID:145639498,NCBI_GP:EGT79846.1;Name=EGT79846.1;Note=ZP_01795102~CGSHiII_09663;gbkey=CDS;locus_tag=GGE_1802;product=Hypothetical protein;protein_id=EGT79846.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9496 9502 . - . ID=id-GGE_1802;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1802 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9472 9493 . + . ID=id-AFQR01000035.1:9472..9493;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 9678 10403 . - . ID=gene-GGE_1803;Name=GGE_1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1803 GCA_000222085.2|AFQR01000035.1 Genbank CDS 9678 10403 . - 0 ID=cds-EGT79847.1;Parent=gene-GGE_1803;Dbxref=GeneID:319896514,PFAM:PF05069,NCBI_GP:EGT79847.1;Name=EGT79847.1;Note=YP_004134707;gbkey=CDS;locus_tag=GGE_1803;product=phage protein;protein_id=EGT79847.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9717 10023 . - . ID=id-GGE_1803;Dbxref=PFAM:PF05069;Note=phage_tail_s;gbkey=misc_feature;locus_tag=GGE_1803 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9711 10047 . + . ID=id-AFQR01000035.1:9711..10047;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9714 10149 . + . ID=id-AFQR01000035.1:9714..10149;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9726 9864 . + . ID=id-AFQR01000035.1:9726..9864;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 9744 9897 . + . ID=id-AFQR01000035.1:9744..9897;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 10400 10864 . - . ID=gene-GGE_1804;Name=GGE_1804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1804 GCA_000222085.2|AFQR01000035.1 Genbank CDS 10400 10864 . - 0 ID=cds-EGT79848.1;Parent=gene-GGE_1804;Dbxref=GeneID:319896515,InterPro:IPR009678,PFAM:PF06891,NCBI_GP:EGT79848.1;Name=EGT79848.1;Note=YP_004134708;gbkey=CDS;locus_tag=GGE_1804;product=phage protein;protein_id=EGT79848.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 10400 10802 . - . ID=id-GGE_1804;Note=superfamily%3B label: P2_Phage_GpR superfamily;gbkey=misc_feature;locus_tag=GGE_1804 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 10406 10799 . - . ID=id-GGE_1804-2;Dbxref=InterPro:IPR009678,PFAM:PF06891;Note=p2_phage_gpr~p2 phage tail completion r;gbkey=misc_feature;locus_tag=GGE_1804 GCA_000222085.2|AFQR01000035.1 Genbank gene 10870 11322 . - . ID=gene-GGE_1805;Name=GGE_1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1805 GCA_000222085.2|AFQR01000035.1 Genbank CDS 10870 11322 . - 0 ID=cds-EGT79849.1;Parent=gene-GGE_1805;Dbxref=GeneID:17981834,InterPro:IPR009225,PFAM:PF05926,NCBI_GP:EGT79849.1;Name=EGT79849.1;Note=NP_536825;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||;locus_tag=GGE_1805;product=packaging protein;protein_id=EGT79849.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 10909 11284 . - . ID=id-GGE_1805;Dbxref=InterPro:IPR009225,PFAM:PF05926;Note=superfamily~phage_gpl~phage head completion%3B label: Phage_GPL superfamily;gbkey=misc_feature;locus_tag=GGE_1805 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 11113 11122 . - . ID=id-GGE_1805-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1805 GCA_000222085.2|AFQR01000035.1 Genbank gene 11315 12160 . - . ID=gene-GGE_1806;Name=GGE_1806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1806 GCA_000222085.2|AFQR01000035.1 Genbank CDS 11315 12160 . - 0 ID=cds-EGT79850.1;Parent=gene-GGE_1806;Dbxref=GeneID:9628623,InterPro:IPR010270,PFAM:PF05944,NCBI_GP:EGT79850.1;Name=EGT79850.1;Note=NP_043488;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||,endonuclease activity|0004519||;go_process=viral capsid assembly|0019069||;locus_tag=GGE_1806;product=putative phage small terminase subunit;protein_id=EGT79850.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 11321 12026 . - . ID=id-GGE_1806;Note=superfamily%3B label: Phage_term_smal superfamily;gbkey=misc_feature;locus_tag=GGE_1806 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 11438 11708 . - . ID=id-GGE_1806-2;Dbxref=InterPro:IPR010270,PFAM:PF05944;Note=phage_term_smal~phage small terminase subunit;gbkey=misc_feature;locus_tag=GGE_1806 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12074 12083 . - . ID=id-GGE_1806-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1806 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 11351 11834 . + . ID=id-AFQR01000035.1:11351..11834;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 12174 13184 . - . ID=gene-GGE_1807;Name=GGE_1807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1807 GCA_000222085.2|AFQR01000035.1 Genbank CDS 12174 13184 . - 0 ID=cds-EGT79851.1;Parent=gene-GGE_1807;Dbxref=GeneID:319896518,InterPro:IPR006441,PFAM:PF05125,TIGRFAM:TIGR01551,NCBI_GP:EGT79851.1;Name=EGT79851.1;Note=YP_004134711;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||;locus_tag=GGE_1807;product=phage major capsid protein;protein_id=EGT79851.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12183 13158 . - . ID=id-GGE_1807;Dbxref=InterPro:IPR006441,TIGRFAM:TIGR01551;Note=major_capsid_p2: phage major capsid p~phage major capsid protein%2C p2;gbkey=misc_feature;locus_tag=GGE_1807 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12186 13155 . - . ID=id-GGE_1807-2;Dbxref=InterPro:IPR006441,PFAM:PF05125;Note=phage_cap_p2~phage major capsid protein%2C p2;gbkey=misc_feature;locus_tag=GGE_1807 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12189 12204 . - . ID=id-GGE_1807-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1807 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12219 13122 . - . ID=id-GGE_1807-4;Note=superfamily%3B label: Phage_cap_P2 superfamily;gbkey=misc_feature;locus_tag=GGE_1807 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 12219 12747 . + . ID=id-AFQR01000035.1:12219..12747;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 13188 14078 . - . ID=gene-GGE_1808;Name=GGE_1808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1808 GCA_000222085.2|AFQR01000035.1 Genbank CDS 13188 14078 . - 0 ID=cds-EGT79852.1;Parent=gene-GGE_1808;Dbxref=GeneID:17981831,InterPro:IPR009228,PFAM:PF05929,NCBI_GP:EGT79852.1;Name=EGT79852.1;Note=NP_536822;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||;locus_tag=GGE_1808;product=putative capsid-scaffolding protein;protein_id=EGT79852.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 13200 13998 . - . ID=id-GGE_1808;Note=multi-dom%3B label: O;gbkey=misc_feature;locus_tag=GGE_1808 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 13212 13560 . - . ID=id-GGE_1808-2;Note=superfamily%3B label: Phage_GPO superfamily;gbkey=misc_feature;locus_tag=GGE_1808 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 13215 13950 . - . ID=id-GGE_1808-3;Dbxref=InterPro:IPR009228,PFAM:PF05929;Note=phage_gpo~phage capsid scaffolding;gbkey=misc_feature;locus_tag=GGE_1808 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 13227 13713 . + . ID=id-AFQR01000035.1:13227..13713;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 13245 13848 . + . ID=id-AFQR01000035.1:13245..13848;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 14297 16120 . + . ID=gene-GGE_1809;Name=GGE_1809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1809 GCA_000222085.2|AFQR01000035.1 Genbank CDS 14297 16120 . + 0 ID=cds-EGT79853.1;Parent=gene-GGE_1809;Dbxref=GeneID:9628620,InterPro:IPR004921,InterPro:IPR010332,PFAM:PF03237,PFAM:PF06056,NCBI_GP:EGT79853.1;Name=EGT79853.1;Note=NP_043485;Ontology_term=GO:0019069,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;go_process=viral capsid assembly|0019069||;locus_tag=GGE_1809;product=putative bacteriophage terminase%2C large subunit;protein_id=EGT79853.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14333 16079 . + . ID=id-GGE_1809;Note=multi-dom%3B label: P;gbkey=misc_feature;locus_tag=GGE_1809 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14348 14474 . + . ID=id-GGE_1809-2;Dbxref=InterPro:IPR010332,PFAM:PF06056;Note=superfamily~terminase_5~atpase terminase subunit%2C putative%3B label: Terminase_5 superfamily;gbkey=misc_feature;locus_tag=GGE_1809 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14636 14645 . + . ID=id-GGE_1809-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1809 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14837 15524 . + . ID=id-GGE_1809-4;Dbxref=InterPro:IPR004921,PFAM:PF03237;Note=terminase_6~bacteriophage terminase%2C large subunit;gbkey=misc_feature;locus_tag=GGE_1809 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14345 14612 . - . ID=id-AFQR01000035.1:14345..14612;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 14363 14516 . - . ID=id-AFQR01000035.1:14363..14516;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 16110 17147 . + . ID=gene-GGE_1810;Name=GGE_1810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1810 GCA_000222085.2|AFQR01000035.1 Genbank CDS 16110 17147 . + 0 ID=cds-EGT79854.1;Parent=gene-GGE_1810;Dbxref=GeneID:9628619,InterPro:IPR006430,InterPro:IPR006944,PFAM:PF04860,TIGRFAM:TIGR01540,NCBI_GP:EGT79854.1;Name=EGT79854.1;Note=NP_043484;gbkey=CDS;locus_tag=GGE_1810;product=putative phage portal protein%2C PBSX;protein_id=EGT79854.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 16110 17139 . + . ID=id-GGE_1810;Note=superfamily%3B label: Phage_portal superfamily;gbkey=misc_feature;locus_tag=GGE_1810 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 16233 17007 . + . ID=id-GGE_1810-2;Dbxref=InterPro:IPR006944,PFAM:PF04860;Note=phage_portal~phage portal protein;gbkey=misc_feature;locus_tag=GGE_1810 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 16251 16974 . + . ID=id-GGE_1810-3;Dbxref=InterPro:IPR006430,TIGRFAM:TIGR01540;Note=multi-dom~portal_pbsx: phage portal protein%2C pbsx f~phage portal protein%2C pbsx%3B label: portal_PBSX;gbkey=misc_feature;locus_tag=GGE_1810 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 16155 16764 . - . ID=id-AFQR01000035.1:16155..16764;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 16167 16176 . - . ID=id-AFQR01000035.1:16167..16176;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 17411 17417 . - . ID=id-AFQR01000035.1:17411..17417;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 17516 17917 . - . ID=gene-GGE_1811;Name=GGE_1811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1811 GCA_000222085.2|AFQR01000035.1 Genbank CDS 17516 17917 . - 0 ID=cds-EGT79855.1;Parent=gene-GGE_1811;Dbxref=GeneID:9628618,InterPro:IPR005357,PFAM:PF03681,NCBI_GP:EGT79855.1;Name=EGT79855.1;Note=NP_043483;gbkey=CDS;locus_tag=GGE_1811;product=Hypothetical protein;protein_id=EGT79855.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 17516 17711 . - . ID=id-GGE_1811;Note=superfamily:SSF143100~ttha1013-like;gbkey=misc_feature;locus_tag=GGE_1811 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 17525 17654 . - . ID=id-GGE_1811-2;Dbxref=InterPro:IPR005357,PFAM:PF03681;Note=superfamily~upf0150~uncharacterised protein family upf0150%3B label: UPF0150 superfamily;gbkey=misc_feature;locus_tag=GGE_1811 GCA_000222085.2|AFQR01000035.1 Genbank gene 17945 18163 . - . ID=gene-GGE_1812;Name=GGE_1812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1812 GCA_000222085.2|AFQR01000035.1 Genbank CDS 17945 18163 . - 0 ID=cds-EGT79856.1;Parent=gene-GGE_1812;Dbxref=GeneID:19289355,InterPro:IPR012933,InterPro:IPR015146,PFAM:PF07927,NCBI_GP:EGT79856.1;Name=EGT79856.1;Note=NP_597845;gbkey=CDS;locus_tag=GGE_1812;product=putative Hypothetical protein family UPF0395;protein_id=EGT79856.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 17990 18119 . - . ID=id-GGE_1812;Dbxref=InterPro:IPR015146;Note=Gene3D:3.30.920.30~superfamily:SSF54786~ycfa/nrd intein domain~ribonucleotide reductase%2C stirrup;gbkey=misc_feature;locus_tag=GGE_1812 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 17996 18113 . - . ID=id-GGE_1812-2;Dbxref=InterPro:IPR012933,PFAM:PF07927;Note=superfamily~ycfa~uncharacterised protein family upf0395%3B label: YcfA superfamily;gbkey=misc_feature;locus_tag=GGE_1812 GCA_000222085.2|AFQR01000035.1 Genbank gene 18217 18735 . - . ID=gene-GGE_1813;Name=GGE_1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1813 GCA_000222085.2|AFQR01000035.1 Genbank CDS 18217 18735 . - 0 ID=cds-EGT79857.1;Parent=gene-GGE_1813;Dbxref=GeneID:9628617,InterPro:IPR008593,PFAM:PF05869,TIGRFAM:TIGR01712,NCBI_GP:EGT79857.1;Name=EGT79857.1;Note=NP_043482;Ontology_term=GO:0006306,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||;locus_tag=GGE_1813;product=putative dNA N-6-adenine-methyltransferase;protein_id=EGT79857.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 18217 18727 . - . ID=id-GGE_1813;Dbxref=InterPro:IPR008593,PFAM:PF05869;Note=superfamily~dam~dna n-6-adenine-methyltransferase%3B label: Dam superfamily;gbkey=misc_feature;locus_tag=GGE_1813 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 18217 18646 . - . ID=id-GGE_1813-2;Dbxref=InterPro:IPR008593,TIGRFAM:TIGR01712;Note=phage_n6a_met: phage n-6-adenine-methyl~dna n-6-adenine-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1813 GCA_000222085.2|AFQR01000035.1 Genbank gene 18998 19300 . - . ID=gene-GGE_1814;Name=GGE_1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1814 GCA_000222085.2|AFQR01000035.1 Genbank CDS 18998 19300 . - 0 ID=cds-EGT79858.1;Parent=gene-GGE_1814;Dbxref=GeneID:17981826,NCBI_GP:EGT79858.1;Name=EGT79858.1;Note=NP_536817;gbkey=CDS;locus_tag=GGE_1814;product=Hypothetical protein;protein_id=EGT79858.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19234 19243 . - . ID=id-GGE_1814;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1814 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19067 19229 . + . ID=id-AFQR01000035.1:19067..19229;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 19312 21642 . - . ID=gene-GGE_1815;Name=GGE_1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1815 GCA_000222085.2|AFQR01000035.1 Genbank CDS 19312 21642 . - 0 ID=cds-EGT79859.1;Parent=gene-GGE_1815;Dbxref=GeneID:9628613,InterPro:IPR008766,PFAM:PF05840,NCBI_GP:EGT79859.1;Name=EGT79859.1;Note=NP_043478;Ontology_term=GO:0006260,GO:0016788;gbkey=CDS;go_function=hydrolase activity acting on ester bonds|0016788||;go_process=DNA replication|0006260||;locus_tag=GGE_1815;product=replication protein;protein_id=EGT79859.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19348 21337 . + . ID=id-AFQR01000035.1:19348..21337;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19351 21079 . + . ID=id-AFQR01000035.1:19351..21079;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19369 20464 . + . ID=id-AFQR01000035.1:19369..20464;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19828 20521 . + . ID=id-AFQR01000035.1:19828..20521;Note=superfamily%3B label: Phage_GPA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 19855 20494 . + . ID=id-AFQR01000035.1:19855..20494;Dbxref=InterPro:IPR008766,PFAM:PF05840;Note=phage_gpa~replication endonuclease%2C probable%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 21517 21526 . + . ID=id-AFQR01000035.1:21517..21526;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 22010 22195 . - . ID=gene-GGE_1816;Name=GGE_1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1816 GCA_000222085.2|AFQR01000035.1 Genbank CDS 22010 22195 . - 0 ID=cds-EGT79860.1;Parent=gene-GGE_1816;Dbxref=GeneID:9628610,NCBI_GP:EGT79860.1;Name=EGT79860.1;Note=NP_043475;gbkey=CDS;locus_tag=GGE_1816;product=Hypothetical protein;protein_id=EGT79860.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank gene 22195 22563 . - . ID=gene-GGE_1817;Name=GGE_1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1817 GCA_000222085.2|AFQR01000035.1 Genbank CDS 22195 22563 . - 0 ID=cds-EGT79861.1;Parent=gene-GGE_1817;Dbxref=GeneID:1679812,NCBI_GP:EGT79861.1;Name=EGT79861.1;Note=CAA96226;gbkey=CDS;locus_tag=GGE_1817;product=orf6;protein_id=EGT79861.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 22534 22543 . - . ID=id-GGE_1817;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1817 GCA_000222085.2|AFQR01000035.1 Genbank gene 22582 23085 . - . ID=gene-GGE_1818;Name=GGE_1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1818 GCA_000222085.2|AFQR01000035.1 Genbank CDS 22582 23085 . - 0 ID=cds-EGT79862.1;Parent=gene-GGE_1818;Dbxref=GeneID:9628608,NCBI_GP:EGT79862.1;Name=EGT79862.1;Note=NP_043473;gbkey=CDS;locus_tag=GGE_1818;product=Hypothetical protein;protein_id=EGT79862.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 23121 23130 . - . ID=id-AFQR01000035.1:23121..23130;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 23144 23359 . - . ID=gene-GGE_1819;Name=GGE_1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1819 GCA_000222085.2|AFQR01000035.1 Genbank CDS 23144 23359 . - 0 ID=cds-EGT79863.1;Parent=gene-GGE_1819;Dbxref=GeneID:17981819,NCBI_GP:EGT79863.1;Name=EGT79863.1;Note=NP_536810;gbkey=CDS;locus_tag=GGE_1819;product=orf2Scox;protein_id=EGT79863.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank gene 23478 24053 . + . ID=gene-GGE_1820;Name=GGE_1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1820 GCA_000222085.2|AFQR01000035.1 Genbank CDS 23478 24053 . + 0 ID=cds-EGT79864.1;Parent=gene-GGE_1820;Dbxref=GeneID:9628606,InterPro:IPR010744,PFAM:PF07022,NCBI_GP:EGT79864.1;Name=EGT79864.1;Note=NP_043471;Ontology_term=GO:0016481,GO:0003677,GO:0016564;gbkey=CDS;go_function=DNA binding|0003677||,transcription repressor activity|0016564||;go_process=negative regulation of transcription|0016481||;locus_tag=GGE_1820;product=CI repressor;protein_id=EGT79864.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 23505 23673 . + . ID=id-GGE_1820;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_1820 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 23505 23667 . + . ID=id-GGE_1820-2;Dbxref=InterPro:IPR010744,PFAM:PF07022;Note=phage_ci_repr~bacteriophage ci repressor;gbkey=misc_feature;locus_tag=GGE_1820 GCA_000222085.2|AFQR01000035.1 Genbank gene 24219 25004 . + . ID=gene-GGE_1821;Name=GGE_1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1821 GCA_000222085.2|AFQR01000035.1 Genbank CDS 24219 25004 . + 0 ID=cds-EGT79865.1;Parent=gene-GGE_1821;Dbxref=GeneID:157370275,NCBI_GP:EGT79865.1;Name=EGT79865.1;Note=YP_001478264~Spro_2033;gbkey=CDS;locus_tag=GGE_1821;product=Hypothetical protein;protein_id=EGT79865.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 24249 24642 . - . ID=id-AFQR01000035.1:24249..24642;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 25016 25258 . + . ID=gene-GGE_1822;Name=GGE_1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1822 GCA_000222085.2|AFQR01000035.1 Genbank CDS 25016 25258 . + 0 ID=cds-EGT79866.1;Parent=gene-GGE_1822;Dbxref=GeneID:77458362,NCBI_GP:EGT79866.1;Name=EGT79866.1;Note=YP_347867~Pfl01_2135;gbkey=CDS;locus_tag=GGE_1822;product=Hypothetical protein;protein_id=EGT79866.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank gene 25258 25461 . + . ID=gene-GGE_1823;Name=GGE_1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1823 GCA_000222085.2|AFQR01000035.1 Genbank CDS 25258 25461 . + 0 ID=cds-EGT79867.1;Parent=gene-GGE_1823;Dbxref=GeneID:9628603,InterPro:IPR002696,PFAM:PF01809,NCBI_GP:EGT79867.1;Name=EGT79867.1;Note=NP_043468;gbkey=CDS;locus_tag=GGE_1823;product=Hypothetical protein;protein_id=EGT79867.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 25258 25429 . + . ID=id-GGE_1823;Note=superfamily%3B label: DUF37 superfamily;gbkey=misc_feature;locus_tag=GGE_1823 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 25264 25450 . + . ID=id-GGE_1823-2;Dbxref=InterPro:IPR002696,PFAM:PF01809;Note=duf37~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_1823 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 25330 25384 . + . ID=id-GGE_1823-3;Dbxref=InterPro:IPR002696;Note=BlastProDom:PD004225~yo02_bphp1_p51701~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_1823 GCA_000222085.2|AFQR01000035.1 Genbank gene 25722 26021 . + . ID=gene-GGE_1824;Name=GGE_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1824 GCA_000222085.2|AFQR01000035.1 Genbank CDS 25722 26021 . + 0 ID=cds-EGT79868.1;Parent=gene-GGE_1824;Dbxref=GeneID:319896530,InterPro:IPR007712,PFAM:PF05016,NCBI_GP:EGT79868.1;Name=EGT79868.1;Note=YP_004134723;gbkey=CDS;locus_tag=GGE_1824;product=plasmid stabilization system;protein_id=EGT79868.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 25734 26010 . + . ID=id-GGE_1824;Note=superfamily%3B label: Plasmid_stabil superfamily;gbkey=misc_feature;locus_tag=GGE_1824 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 25743 25983 . + . ID=id-GGE_1824-2;Dbxref=InterPro:IPR007712,PFAM:PF05016;Note=plasmid_stabil~plasmid stabilization system;gbkey=misc_feature;locus_tag=GGE_1824 GCA_000222085.2|AFQR01000035.1 Genbank gene 26024 27037 . + . ID=gene-GGE_1825;Name=GGE_1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1825 GCA_000222085.2|AFQR01000035.1 Genbank CDS 26024 27037 . + 0 ID=cds-EGT79869.1;Parent=gene-GGE_1825;Dbxref=GeneID:17981816,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,PFAM:PF00589,NCBI_GP:EGT79869.1;Name=EGT79869.1;Note=NP_536807;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1825;product=integrase;protein_id=EGT79869.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26024 27026 . + . ID=id-GGE_1825;Note=multi-dom%3B label: int;gbkey=misc_feature;locus_tag=GGE_1825 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26528 26534 . + . ID=id-GGE_1825-2;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_1825 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26993 27002 . + . ID=id-GGE_1825-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1825 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26471 26543 . - . ID=id-AFQR01000035.1:26471..26543;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26489 26555 . - . ID=id-AFQR01000035.1:26489..26555;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 26492 26543 . - . ID=id-AFQR01000035.1:26492..26543;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27577 27586 . - . ID=id-AFQR01000035.1:27577..27586;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 27589 28863 . - . ID=gene-GGE_1826;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank CDS 27589 28863 . - 0 ID=cds-EGT79870.1;Parent=gene-GGE_1826;Dbxref=GeneID:1174691,InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR004450,PFAM:PF00291,TIGRFAM:TIGR00260,NCBI_GP:EGT79870.1;Name=EGT79870.1;Ontology_term=GO:0006520,GO:0008152,GO:0009088,GO:0003824,GO:0030170,GO:0004795;gbkey=CDS;gene=thrC;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,threonine synthase activity|0004795||;go_process=cellular amino acid metabolic process|0006520||,metabolic process|0008152||,threonine biosynthetic process|0009088||;locus_tag=GGE_1826;product=Threonine synthase;protein_id=EGT79870.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27589 28861 . - . ID=id-GGE_1826;Dbxref=InterPro:IPR001926;Note=multi-dom~superfamily:SSF53686~tryptophan synthase beta subunit-like plp-dependent enzyme~pyridoxal phosphate-dependent enzyme%2C beta subunit%3B label: ThrC;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27589 27835 . - . ID=id-GGE_1826-2;Note=Gene3D:3.90.1380.10;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27598 28846 . - . ID=id-GGE_1826-3;Note=superfamily%3B label: Trp-synth-beta_II superfamily;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27622 28798 . - . ID=id-GGE_1826-4;Note=HMMPanther:PTHR10314:SF5~threonine synthase~HMMPanther:PTHR10314~ser/thr dehydratase%2C trp synthase;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27739 28630 . - . ID=id-GGE_1826-5;Dbxref=InterPro:IPR004450,TIGRFAM:TIGR00260;Note=thrc: threonine synthase~threonine synthase;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27847 28432 . - . ID=id-GGE_1826-6;Dbxref=InterPro:IPR001926,PFAM:PF00291;Note=palp~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=thrC;locus_tag=GGE_1826 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27625 28552 . + . ID=id-AFQR01000035.1:27625..28552;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27634 27874 . + . ID=id-AFQR01000035.1:27634..27874;Dbxref=InterPro:IPR000634;Note=PatternScan:PS00165~dehydratase_ser_thr~serine/threonine dehydratase%2C pyridoxal-phosphate-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27820 28558 . + . ID=id-AFQR01000035.1:27820..28558;Note=Gene3D:3.40.50.1100;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27856 27901 . + . ID=id-AFQR01000035.1:27856..27901;Note=Gene3D:3.40.50.1100;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 27964 28168 . + . ID=id-AFQR01000035.1:27964..28168;Note=Gene3D:3.40.50.1100;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 28907 29851 . - . ID=gene-GGE_1827;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank CDS 28907 29851 . - 0 ID=cds-EGT79871.1;Parent=gene-GGE_1827;Dbxref=GeneID:81336887,InterPro:IPR000870,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,PFAM:PF00288,PFAM:PF08544,PIR:PIRSF000676,TIGRFAM:TIGR00191,NCBI_GP:EGT79871.1;Name=EGT79871.1;Ontology_term=GO:0016310,GO:0006566,GO:0005524,GO:0004413,GO:0016301;gbkey=CDS;gene=thrB;go_function=ATP binding|0005524||,homoserine kinase activity|0004413||,kinase activity|0016301||;go_process=phosphorylation|0016310||,threonine metabolic process|0006566||;locus_tag=GGE_1827;product=Homoserine kinase;protein_id=EGT79871.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28907 29846 . - . ID=id-GGE_1827;Dbxref=InterPro:IPR000870,PIR:PIRSF000676;Note=homoserine kinase~homoserine kinase;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28907 29840 . - . ID=id-GGE_1827-2;Note=HMMPanther:PTHR20861:SF3~homoserine kinase~HMMPanther:PTHR20861~family not named;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28907 29477 . - . ID=id-GGE_1827-3;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28913 29846 . - . ID=id-GGE_1827-4;Dbxref=InterPro:IPR000870,TIGRFAM:TIGR00191;Note=thrb: homoserine kinase~homoserine kinase;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28913 29843 . - . ID=id-GGE_1827-5;Note=multi-dom%3B label: thrB;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28913 29840 . - . ID=id-GGE_1827-6;Dbxref=InterPro:IPR000870;Note=HAMAP:MF_00384~homoser_kinase~homoserine kinase;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28913 29384 . - . ID=id-GGE_1827-7;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28934 28955 . - . ID=id-GGE_1827-8;Dbxref=InterPro:IPR000870;Note=FPrintScan:PR00958~homserkinase~homoserine kinase;gbkey=misc_feature;gene=thrB;locus_tag=GGE_1827 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28943 29285 . + . ID=id-AFQR01000035.1:28943..29285;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28943 29192 . + . ID=id-AFQR01000035.1:28943..29192;Dbxref=InterPro:IPR006203;Note=PatternScan:PS00627~ghmp_kinases_atp~ghmp kinase%2C atp-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28949 29333 . + . ID=id-AFQR01000035.1:28949..29333;Dbxref=InterPro:IPR000870;Note=FPrintScan:PR00958~homserkinase~homoserine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28955 29684 . + . ID=id-AFQR01000035.1:28955..29684;Dbxref=InterPro:IPR000870;Note=FPrintScan:PR00958~homserkinase~homoserine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28955 29213 . + . ID=id-AFQR01000035.1:28955..29213;Dbxref=InterPro:IPR000870;Note=FPrintScan:PR00958~homserkinase~homoserine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 28961 29447 . + . ID=id-AFQR01000035.1:28961..29447;Dbxref=InterPro:IPR000870;Note=FPrintScan:PR00958~homserkinase~homoserine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29087 29603 . + . ID=id-AFQR01000035.1:29087..29603;Dbxref=InterPro:IPR013750,PFAM:PF08544;Note=ghmp_kinases_c~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29108 29174 . + . ID=id-AFQR01000035.1:29108..29174;Dbxref=InterPro:IPR006204,PFAM:PF00288;Note=ghmp_kinases_n~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29111 29171 . + . ID=id-AFQR01000035.1:29111..29171;Note=superfamily%3B label: GHMP_kinases_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29141 29552 . + . ID=id-AFQR01000035.1:29141..29552;Note=superfamily%3B label: GHMP_kinases_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29297 29429 . + . ID=id-AFQR01000035.1:29297..29429;Note=superfamily:SSF55060~ghmp kinase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 29864 32311 . - . ID=gene-GGE_1828;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank CDS 29864 32311 . - 0 ID=cds-EGT79872.1;Parent=gene-GGE_1828;Dbxref=GeneID:1168401,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR002912,InterPro:IPR005106,InterPro:IPR011147,InterPro:IPR016040,InterPro:IPR018042,InterPro:IPR019811,PFAM:PF00696,PFAM:PF00742,PFAM:PF01842,PFAM:PF03447,PIR:PIRSF000727,TIGRFAM:TIGR00657,NCBI_GP:EGT79872.1;Name=EGT79872.1;Ontology_term=GO:0009067,GO:0008652,GO:0006520,GO:0008152,GO:0055114,GO:0050661,GO:0016597,GO:0004072,GO:0005488,GO:0003824,GO:0004412,GO:0016491;gbkey=CDS;gene=thrA;go_function=NADP or NADPH binding|0050661||,amino acid binding|0016597||,aspartate kinase activity|0004072||,binding|0005488||,catalytic activity|0003824||,homoserine dehydrogenase activity|0004412||,oxidoreductase activity|0016491||;go_process=aspartate family amino acid biosynthetic process|0009067||,cellular amino acid biosynthetic process|0008652||,cellular amino acid metabolic process|0006520||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1828;product=putative aspartokinase/homoserine dehydrogenase-like protein;protein_id=EGT79872.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 32309 . - . ID=id-GGE_1828;Dbxref=InterPro:IPR011147,PIR:PIRSF000727;Note=hypothetical aspartokinase/homoserine dehydrogenase-like protein i~hypothetical aspartokinase/homoserine dehydrogenase-like protein i;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 32306 . - . ID=id-GGE_1828-2;Note=HMMPanther:PTHR21499:SF6~subfamily not named~HMMPanther:PTHR21499~family not named;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 32303 . - . ID=id-GGE_1828-3;Note=multi-dom%3B label: thrA;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 31247 . - . ID=id-GGE_1828-4;Dbxref=InterPro:IPR001341,TIGRFAM:TIGR00657;Note=asp_kinases: aspartate kinase~aspartate kinase domain;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 30764 . - . ID=id-GGE_1828-5;Dbxref=InterPro:IPR001048;Note=superfamily:SSF53633~carbamate kinase-like~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29864 30749 . - . ID=id-GGE_1828-6;Note=specific~superfamily%3B label: AAK superfamily;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29870 30713 . - . ID=id-GGE_1828-7;Dbxref=InterPro:IPR001048,PFAM:PF00696;Note=aa_kinase~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29873 29891 . - . ID=id-GGE_1828-8;Dbxref=InterPro:IPR018042;Note=PatternScan:PS00324~aspartokinase~aspartate kinase%2C conserved site;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30191 30434 . - . ID=id-GGE_1828-9;Dbxref=InterPro:IPR001048;Note=Gene3D:3.40.1160.10~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=thrA;locus_tag=GGE_1828 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29888 31277 . + . ID=id-AFQR01000035.1:29888..31277;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29900 30494 . + . ID=id-AFQR01000035.1:29900..30494;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 29933 31844 . + . ID=id-AFQR01000035.1:29933..31844;Dbxref=InterPro:IPR019811;Note=PatternScan:PS01042~homoser_dhgenase~homoserine dehydrogenase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30020 30836 . + . ID=id-AFQR01000035.1:30020..30836;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30035 31070 . + . ID=id-AFQR01000035.1:30035..31070;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30062 31052 . + . ID=id-AFQR01000035.1:30062..31052;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30104 30809 . + . ID=id-AFQR01000035.1:30104..30809;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30107 30767 . + . ID=id-AFQR01000035.1:30107..30767;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30158 31010 . + . ID=id-AFQR01000035.1:30158..31010;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30248 31301 . + . ID=id-AFQR01000035.1:30248..31301;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30269 31280 . + . ID=id-AFQR01000035.1:30269..31280;Dbxref=InterPro:IPR005106,PFAM:PF03447;Note=nad_binding_3~aspartate/homoserine dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30332 31772 . + . ID=id-AFQR01000035.1:30332..31772;Note=Gene3D:3.30.360.10;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30383 31253 . + . ID=id-AFQR01000035.1:30383..31253;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30389 31250 . + . ID=id-AFQR01000035.1:30389..31250;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30416 31706 . + . ID=id-AFQR01000035.1:30416..31706;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 30455 31706 . + . ID=id-AFQR01000035.1:30455..31706;Dbxref=InterPro:IPR001342,PFAM:PF00742;Note=superfamily~homoserine_dh~homoserine dehydrogenase%2C catalytic%3B label: Homoserine_dh superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32473 32482 . + . ID=id-AFQR01000035.1:32473..32482;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000035.1 Genbank gene 32636 33337 . + . ID=gene-GGE_1829;Name=GGE_1829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank CDS 32636 33337 . + 0 ID=cds-EGT79873.1;Parent=gene-GGE_1829;Dbxref=GeneID:1723862,InterPro:IPR001608,InterPro:IPR011078,PFAM:PF01168,PIR:PIRSF004848,TIGRFAM:TIGR00044,NCBI_GP:EGT79873.1;Name=EGT79873.1;Note=HI_0090;gbkey=CDS;locus_tag=GGE_1829;product=UPF0001 protein;protein_id=EGT79873.1;transl_table=11 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32636 33335 . + . ID=id-GGE_1829;Dbxref=InterPro:IPR011078,PIR:PIRSF004848;Note=predicted pyridoxal 5'-phosphate-dependent enzyme%2C ybl036c type~predicted pyridoxal phosphate-dependent enzyme%2C ybl036c type~HMMPanther:PTHR10146~proline synthetase co-transcribed bacterial homolog protein~predicted pyridoxal phosphate-dependent enzyme%2C ybl036c type;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32636 33332 . + . ID=id-GGE_1829-2;Note=Gene3D:3.20.20.10;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32636 33323 . + . ID=id-GGE_1829-3;Dbxref=InterPro:IPR011078,TIGRFAM:TIGR00044;Note=tigr00044: pyridoxal phosphate enzyme%2C yggs~predicted pyridoxal phosphate-dependent enzyme%2C ybl036c type;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32636 33317 . + . ID=id-GGE_1829-4;Note=superfamily:SSF51419~plp-binding barrel;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32642 33317 . + . ID=id-GGE_1829-5;Note=specific~superfamily%3B label: PLPDE_III superfamily;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32654 33311 . + . ID=id-GGE_1829-6;Dbxref=InterPro:IPR001608,PFAM:PF01168;Note=ala_racemase_n~alanine racemase;gbkey=misc_feature;locus_tag=GGE_1829 GCA_000222085.2|AFQR01000035.1 Genbank sequence_feature 32681 32867 . - . ID=id-AFQR01000035.1:32681..32867;Dbxref=InterPro:IPR011078;Note=PatternScan:PS01211~upf0001~predicted pyridoxal phosphate-dependent enzyme%2C ybl036c type;gbkey=misc_feature ##sequence-region AFQR01000034.1 1 29865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000034.1 Genbank region 1 29865 . + . ID=AFQR01000034.1:1..29865;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000034.1 Genbank gene 288 2090 . + . ID=gene-GGE_1763;Name=GGE_1763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1763 GCA_000222085.2|AFQR01000034.1 Genbank CDS 288 2090 . + 0 ID=cds-EGT79918.1;Parent=gene-GGE_1763;Dbxref=GeneID:301169147,InterPro:IPR004968,InterPro:IPR006500,InterPro:IPR011991,InterPro:IPR014015,InterPro:IPR014818,PFAM:PF03288,PFAM:PF08706,TIGRFAM:TIGR01613,NCBI_GP:EGT79918.1;Name=EGT79918.1;Note=CBW28744;gbkey=CDS;locus_tag=GGE_1763;product=phage phi-r73 primase-like protein;protein_id=EGT79918.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 408 417 . + . ID=id-GGE_1763;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1763 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 1020 1227 . + . ID=id-GGE_1763-2;Dbxref=InterPro:IPR006500,TIGRFAM:TIGR01613;Note=superfamily~primase_cterm: phage/plasmid primase%2C p~dna primase%2C phage/plasmid%3B label: primase_Cterm superfamily;gbkey=misc_feature;locus_tag=GGE_1763 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 525 936 . - . ID=id-AFQR01000034.1:525..936;Dbxref=InterPro:IPR014818,PFAM:PF08706;Note=d5_n~phage/plasmid primase%2C p4;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 558 1782 . - . ID=id-AFQR01000034.1:558..1782;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 564 1779 . - . ID=id-AFQR01000034.1:564..1779;Dbxref=InterPro:IPR004968,PFAM:PF03288;Note=pox_d5~dna primase/nucleoside triphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 597 1779 . - . ID=id-AFQR01000034.1:597..1779;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 669 798 . - . ID=id-AFQR01000034.1:669..798;Note=superfamily%3B label: D5_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 723 1197 . - . ID=id-AFQR01000034.1:723..1197;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 750 1188 . - . ID=id-AFQR01000034.1:750..1188;Dbxref=InterPro:IPR014015;Note=ProfileScan:PS51206~sf3_helicase_1~helicase%2C superfamily 3%2C dna virus;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 843 1071 . - . ID=id-AFQR01000034.1:843..1071;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 2310 2700 . + . ID=id-AFQR01000034.1:2310..2700;Note=superfamily%3B label: GepA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 2840 3235 . + . ID=gene-GGE_1764;Name=GGE_1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1764 GCA_000222085.2|AFQR01000034.1 Genbank CDS 2840 3235 . + 0 ID=cds-EGT79919.1;Parent=gene-GGE_1764;Dbxref=GeneID:167856222,NCBI_GP:EGT79919.1;Name=EGT79919.1;Note=ZP_02478957~HPS_08440;gbkey=CDS;locus_tag=GGE_1764;product=Hypothetical protein;protein_id=EGT79919.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 4565 4574 . - . ID=id-AFQR01000034.1:4565..4574;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 4682 5341 . - . ID=gene-GGE_1765;Name=GGE_1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1765 GCA_000222085.2|AFQR01000034.1 Genbank CDS 4682 5341 . - 0 ID=cds-EGT79920.1;Parent=gene-GGE_1765;Dbxref=GeneID:145642406,NCBI_GP:EGT79920.1;Name=EGT79920.1;Note=ZP_01797963~CGSHiR3021_03118;gbkey=CDS;locus_tag=GGE_1765;product=Hypothetical protein;protein_id=EGT79920.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 4721 4898 . + . ID=id-AFQR01000034.1:4721..4898;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 5345 5872 . - . ID=gene-GGE_1766;Name=GGE_1766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1766 GCA_000222085.2|AFQR01000034.1 Genbank CDS 5345 5872 . - 0 ID=cds-EGT79921.1;Parent=gene-GGE_1766;Dbxref=GeneID:145642407,NCBI_GP:EGT79921.1;Name=EGT79921.1;Note=ZP_01797964~CGSHiR3021_03123;gbkey=CDS;locus_tag=GGE_1766;product=Hypothetical protein;protein_id=EGT79921.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5363 5387 . - . ID=id-GGE_1766;Note=seg;gbkey=misc_feature;locus_tag=GGE_1766 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5810 5819 . - . ID=id-GGE_1766-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1766 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5390 5420 . + . ID=id-AFQR01000034.1:5390..5420;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 5882 7054 . - . ID=gene-GGE_1767;Name=GGE_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1767 GCA_000222085.2|AFQR01000034.1 Genbank CDS 5882 7054 . - 0 ID=cds-EGT79922.1;Parent=gene-GGE_1767;Dbxref=GeneID:68250163,NCBI_GP:EGT79922.1;Name=EGT79922.1;Note=YP_249275;gbkey=CDS;locus_tag=GGE_1767;product=Hypothetical protein;protein_id=EGT79922.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5918 5945 . + . ID=id-AFQR01000034.1:5918..5945;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5927 6419 . + . ID=id-AFQR01000034.1:5927..6419;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 5948 6824 . + . ID=id-AFQR01000034.1:5948..6824;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 7038 7406 . - . ID=gene-GGE_1768;Name=GGE_1768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1768 GCA_000222085.2|AFQR01000034.1 Genbank CDS 7038 7406 . - 0 ID=cds-EGT79923.1;Parent=gene-GGE_1768;Dbxref=GeneID:68250164,NCBI_GP:EGT79923.1;Name=EGT79923.1;Note=YP_249276;gbkey=CDS;locus_tag=GGE_1768;product=Hypothetical protein;protein_id=EGT79923.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank gene 7420 8241 . - . ID=gene-GGE_1769;Name=GGE_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1769 GCA_000222085.2|AFQR01000034.1 Genbank CDS 7420 8241 . - 0 ID=cds-EGT79924.1;Parent=gene-GGE_1769;Dbxref=GeneID:319776222,NCBI_GP:EGT79924.1;Name=EGT79924.1;Note=YP_004138710~HICON_18170;gbkey=CDS;locus_tag=GGE_1769;product=Hypothetical protein;protein_id=EGT79924.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 7459 7540 . + . ID=id-AFQR01000034.1:7459..7540;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 7468 7741 . + . ID=id-AFQR01000034.1:7468..7741;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 7486 8071 . + . ID=id-AFQR01000034.1:7486..8071;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 7486 7876 . + . ID=id-AFQR01000034.1:7486..7876;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 8267 8545 . - . ID=gene-GGE_1770;Name=GGE_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1770 GCA_000222085.2|AFQR01000034.1 Genbank CDS 8267 8545 . - 0 ID=cds-EGT79925.1;Parent=gene-GGE_1770;Dbxref=GeneID:319896500,NCBI_GP:EGT79925.1;Name=EGT79925.1;Note=YP_004134693;gbkey=CDS;locus_tag=GGE_1770;product=Hypothetical protein;protein_id=EGT79925.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank gene 8564 8785 . + . ID=gene-GGE_1771;Name=GGE_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1771 GCA_000222085.2|AFQR01000034.1 Genbank CDS 8564 8785 . + 0 ID=cds-EGT79926.1;Parent=gene-GGE_1771;Dbxref=GeneID:301155064,NCBI_GP:EGT79926.1;Name=EGT79926.1;Note=CBW14527;gbkey=CDS;locus_tag=GGE_1771;product=Hypothetical protein;protein_id=EGT79926.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank gene 9493 12543 . - . ID=gene-GGE_1772;Name=GGE_1772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1772 GCA_000222085.2|AFQR01000034.1 Genbank CDS 9493 12543 . - 0 ID=cds-EGT79927.1;Parent=gene-GGE_1772;Dbxref=GeneID:294789182,InterPro:IPR006935,InterPro:IPR007409,InterPro:IPR014001,PFAM:PF04313,PFAM:PF04851,NCBI_GP:EGT79927.1;Name=EGT79927.1;Note=ZP_06754421;Ontology_term=GO:0006304,GO:0005524,GO:0003677,GO:0004519,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,endonuclease activity|0004519||,hydrolase activity|0016787||;go_process=DNA modification|0006304||;locus_tag=GGE_1772;product=type I site-specific deoxyribonuclease restriction subunit;protein_id=EGT79927.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 9493 12172 . - . ID=id-GGE_1772;Note=multi-dom%3B label: COG0610;gbkey=misc_feature;locus_tag=GGE_1772 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 9673 9931 . - . ID=id-GGE_1772-2;Dbxref=InterPro:IPR007409,PFAM:PF04313;Note=hsdr_n~restriction endonuclease%2C type i%2C hsdr;gbkey=misc_feature;locus_tag=GGE_1772 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 10291 10387 . - . ID=id-GGE_1772-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1772 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 10384 10855 . - . ID=id-GGE_1772-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1772 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 9535 10936 . + . ID=id-AFQR01000034.1:9535..10936;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 9763 9841 . + . ID=id-AFQR01000034.1:9763..9841;Note=superfamily%3B label: HSDR_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 9877 10390 . + . ID=id-AFQR01000034.1:9877..10390;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 10150 10321 . + . ID=id-AFQR01000034.1:10150..10321;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 10153 10369 . + . ID=id-AFQR01000034.1:10153..10369;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 12437 12446 . + . ID=id-AFQR01000034.1:12437..12446;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 12598 13920 . - . ID=gene-GGE_1773;Name=GGE_1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1773 GCA_000222085.2|AFQR01000034.1 Genbank CDS 12598 13920 . - 0 ID=cds-EGT79928.1;Parent=gene-GGE_1773;Dbxref=GeneID:148263547,InterPro:IPR000055,PFAM:PF01420,NCBI_GP:EGT79928.1;Name=EGT79928.1;Note=YP_001230253;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA modification|0006304||;locus_tag=GGE_1773;product=restriction endonuclease S subunits-like protein;protein_id=EGT79928.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 12631 13234 . - . ID=id-GGE_1773;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature;locus_tag=GGE_1773 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 12679 13141 . - . ID=id-GGE_1773-2;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature;locus_tag=GGE_1773 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 12679 13078 . - . ID=id-GGE_1773-3;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_1773 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 12688 13813 . - . ID=id-GGE_1773-4;Note=multi-dom%3B label: HsdS;gbkey=misc_feature;locus_tag=GGE_1773 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 13075 13342 . + . ID=id-AFQR01000034.1:13075..13342;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 13090 13324 . + . ID=id-AFQR01000034.1:13090..13324;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 13252 13267 . + . ID=id-AFQR01000034.1:13252..13267;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 13988 16270 . - . ID=gene-GGE_1774;Name=GGE_1774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank CDS 13988 16270 . - 0 ID=cds-EGT79929.1;Parent=gene-GGE_1774;Dbxref=GeneID:294789184,InterPro:IPR002052,InterPro:IPR002296,InterPro:IPR003356,InterPro:IPR022749,PFAM:PF02384,PFAM:PF12161,NCBI_GP:EGT79929.1;Name=EGT79929.1;Note=ZP_06754423;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_1774;product=type I site-specific deoxyribonuclease modification subunit;protein_id=EGT79929.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14027 15791 . - . ID=id-GGE_1774;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14033 14504 . - . ID=id-GGE_1774-2;Dbxref=InterPro:IPR022749,PFAM:PF12161;Note=hsdm_n~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14033 14087 . - . ID=id-GGE_1774-3;Note=superfamily%3B label: HsdM_N superfamily;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14606 14951 . - . ID=id-GGE_1774-4;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14609 14924 . - . ID=id-GGE_1774-5;Note=multi-dom%3B label: N6_Mtase;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14675 14786 . - . ID=id-GGE_1774-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1774 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14009 15032 . + . ID=id-AFQR01000034.1:14009..15032;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14027 15023 . + . ID=id-AFQR01000034.1:14027..15023;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14033 14768 . + . ID=id-AFQR01000034.1:14033..14768;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14036 15731 . + . ID=id-AFQR01000034.1:14036..15731;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14039 14669 . + . ID=id-AFQR01000034.1:14039..14669;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14054 16202 . + . ID=id-AFQR01000034.1:14054..16202;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14075 14216 . + . ID=id-AFQR01000034.1:14075..14216;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 14084 16037 . + . ID=id-AFQR01000034.1:14084..16037;Note=superfamily%3B label: ACAD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 16280 16864 . - . ID=gene-GGE_1775;Name=GGE_1775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1775 GCA_000222085.2|AFQR01000034.1 Genbank CDS 16280 16864 . - 0 ID=cds-EGT79930.1;Parent=gene-GGE_1775;Dbxref=GeneID:294789185,InterPro:IPR000055,PFAM:PF01420,NCBI_GP:EGT79930.1;Name=EGT79930.1;Note=ZP_06754424;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA modification|0006304||;locus_tag=GGE_1775;product=putative dNA methylase specificity domain-containing protein;protein_id=EGT79930.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 16286 16850 . - . ID=id-GGE_1775;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature;locus_tag=GGE_1775 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 16286 16757 . - . ID=id-GGE_1775-2;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_1775 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 16346 16784 . + . ID=id-AFQR01000034.1:16346..16784;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 16526 16598 . + . ID=id-AFQR01000034.1:16526..16598;Note=multi-dom%3B label: PRK09737;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 17458 18471 . - . ID=gene-GGE_1776;Name=GGE_1776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank CDS 17458 18471 . - 0 ID=cds-EGT79931.1;Parent=gene-GGE_1776;Dbxref=GeneID:251792891,InterPro:IPR000728,InterPro:IPR010918,InterPro:IPR011854,InterPro:IPR016188,PFAM:PF00586,PFAM:PF02769,PIR:PIRSF005644,TIGRFAM:TIGR02124,NCBI_GP:EGT79931.1;Name=EGT79931.1;Note=YP_003007617;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;locus_tag=GGE_1776;product=hydrogenase expression/formation protein HypE;protein_id=EGT79931.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17458 18469 . - . ID=id-GGE_1776;Dbxref=InterPro:IPR011854,PIR:PIRSF005644;Note=[nife]-hydrogenase maturation factor%2C air synthase-related%2C hype type~hydrogenase expression/formation protein hype;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17458 17938 . - . ID=id-GGE_1776-2;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17470 18460 . - . ID=id-GGE_1776-3;Dbxref=InterPro:IPR011854,TIGRFAM:TIGR02124;Note=hype: hydrogenase expression/formation prote~hydrogenase expression/formation protein hype;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17491 18349 . - . ID=id-GGE_1776-4;Note=specific~superfamily%3B label: HypE;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17506 18424 . - . ID=id-GGE_1776-5;Note=multi-dom%3B label: hypE;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17506 17881 . - . ID=id-GGE_1776-6;Note=Gene3D:3.30.1330.10;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17572 17746 . - . ID=id-GGE_1776-7;Dbxref=InterPro:IPR000728,PFAM:PF00586;Note=airs~air synthase-related protein;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17947 17983 . - . ID=id-GGE_1776-8;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature;locus_tag=GGE_1776 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17905 17959 . + . ID=id-AFQR01000034.1:17905..17959;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 17920 17950 . + . ID=id-AFQR01000034.1:17920..17950;Note=Gene3D:3.90.650.10;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 18473 19585 . - . ID=gene-GGE_1777;Name=GGE_1777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1777 GCA_000222085.2|AFQR01000034.1 Genbank CDS 18473 19585 . - 0 ID=cds-EGT79932.1;Parent=gene-GGE_1777;Dbxref=GeneID:315634614,InterPro:IPR002780,PFAM:PF01924,PIR:PIRSF005622,TIGRFAM:TIGR00075,NCBI_GP:EGT79932.1;Name=EGT79932.1;Note=ZP_07889898;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||;locus_tag=GGE_1777;product=histidine histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase-like protein;protein_id=EGT79932.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 18473 19583 . - . ID=id-GGE_1777;Dbxref=InterPro:IPR002780,PIR:PIRSF005622;Note=superfamily~[nife]-hydrogenase maturation factor%2C hypd type~hydrogenase formation hypd protein%3B label: HypD superfamily;gbkey=misc_feature;locus_tag=GGE_1777 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 18473 19580 . - . ID=id-GGE_1777-2;Dbxref=InterPro:IPR002780,TIGRFAM:TIGR00075;Note=hypd: hydrogenase expression/formation prote~hydrogenase formation hypd protein;gbkey=misc_feature;locus_tag=GGE_1777 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 18479 19577 . - . ID=id-GGE_1777-3;Note=multi-dom%3B label: hypD;gbkey=misc_feature;locus_tag=GGE_1777 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 18503 19553 . - . ID=id-GGE_1777-4;Dbxref=InterPro:IPR002780,PFAM:PF01924;Note=hypd~hydrogenase formation hypd protein;gbkey=misc_feature;locus_tag=GGE_1777 GCA_000222085.2|AFQR01000034.1 Genbank gene 19589 20398 . - . ID=gene-GGE_1778;Name=GGE_1778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank CDS 19589 20398 . - 0 ID=cds-EGT79933.1;Parent=gene-GGE_1778;Dbxref=GeneID:52425518,InterPro:IPR003495,InterPro:IPR004392,InterPro:IPR012202,PFAM:PF02492,PIR:PIRSF005624,TIGRFAM:TIGR00073,NCBI_GP:EGT79933.1;Name=EGT79933.1;Note=YP_088655;Ontology_term=GO:0006461,GO:0016151;gbkey=CDS;go_function=nickel ion binding|0016151||;go_process=protein complex assembly|0006461||;locus_tag=GGE_1778;product=hydrogenase nickel incorporation protein HypB;protein_id=EGT79933.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19589 20396 . - . ID=id-GGE_1778;Dbxref=InterPro:IPR012202,PIR:PIRSF005624;Note=ni(2+)-binding gtpase%2C [nife]-hydrogenase/urease maturation factor~[nife]-hydrogenase/urease maturation factor%2C ni(2+)-binding gtpase;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19589 20387 . - . ID=id-GGE_1778-2;Note=multi-dom%3B label: PRK10463;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19742 20243 . - . ID=id-GGE_1778-3;Dbxref=InterPro:IPR004392,TIGRFAM:TIGR00073;Note=hypb: hydrogenase accessory protein hypb~hydrogenase accessory protein hypb;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19772 20210 . - . ID=id-GGE_1778-4;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19829 20156 . - . ID=id-GGE_1778-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19841 20078 . - . ID=id-GGE_1778-6;Dbxref=InterPro:IPR003495,PFAM:PF02492;Note=cobw~cobalamin (vitamin b12) biosynthesis cobw-like;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19859 20066 . - . ID=id-GGE_1778-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1778 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19613 19877 . + . ID=id-AFQR01000034.1:19613..19877;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 19784 20201 . + . ID=id-AFQR01000034.1:19784..20201;Note=HMMPanther:PTHR12962:SF2~calcium-regulated heat stable protein crhsp-24~HMMPanther:PTHR12962~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 20546 21163 . - . ID=gene-GGE_1779;Name=GGE_1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank CDS 20546 21163 . - 0 ID=cds-EGT79934.1;Parent=gene-GGE_1779;Dbxref=GeneID:1176038,InterPro:IPR003439,PFAM:PF00005,NCBI_GP:EGT79934.1;Name=EGT79934.1;Note=HI_1618;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_1779;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT79934.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20546 21161 . - . ID=id-GGE_1779;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20546 21158 . - . ID=id-GGE_1779-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20552 21158 . - . ID=id-GGE_1779-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20552 21152 . - . ID=id-GGE_1779-4;Note=HMMPanther:PTHR24220:SF22~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20576 21134 . - . ID=id-GGE_1779-5;Note=specific~superfamily%3B label: ABC_cobalt_CbiO_domain1;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20582 21083 . - . ID=id-GGE_1779-6;Note=multi-dom%3B label: cbiO;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 20669 20918 . - . ID=id-GGE_1779-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1779 GCA_000222085.2|AFQR01000034.1 Genbank gene 21165 21797 . - . ID=gene-GGE_1780;Name=GGE_1780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1780 GCA_000222085.2|AFQR01000034.1 Genbank CDS 21165 21797 . - 0 ID=cds-EGT79935.1;Parent=gene-GGE_1780;Dbxref=GeneID:145633021,InterPro:IPR003339,PFAM:PF02361,NCBI_GP:EGT79935.1;Name=EGT79935.1;Note=ZP_01788753;Ontology_term=GO:0009236,GO:0006824,GO:0015087;gbkey=CDS;go_function=cobalt ion transmembrane transporter activity|0015087||;go_process=cobalamin biosynthetic process|0009236||,cobalt ion transport|0006824||;locus_tag=GGE_1780;product=Putative cobalt transport protein;protein_id=EGT79935.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21174 21783 . - . ID=id-GGE_1780;Note=superfamily%3B label: CbiQ superfamily;gbkey=misc_feature;locus_tag=GGE_1780 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21189 21768 . - . ID=id-GGE_1780-2;Dbxref=InterPro:IPR003339,PFAM:PF02361;Note=cbiq~cobalt transport protein;gbkey=misc_feature;locus_tag=GGE_1780 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21204 21234 . - . ID=id-GGE_1780-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1780 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21219 21678 . + . ID=id-AFQR01000034.1:21219..21678;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21219 21564 . + . ID=id-AFQR01000034.1:21219..21564;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21225 21456 . + . ID=id-AFQR01000034.1:21225..21456;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21225 21348 . + . ID=id-AFQR01000034.1:21225..21348;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21234 21468 . + . ID=id-AFQR01000034.1:21234..21468;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21764 21773 . + . ID=id-AFQR01000034.1:21764..21773;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 21797 22417 . - . ID=gene-GGE_1781;Name=GGE_1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1781 GCA_000222085.2|AFQR01000034.1 Genbank CDS 21797 22417 . - 0 ID=cds-EGT79936.1;Parent=gene-GGE_1781;Dbxref=GeneID:1176041,InterPro:IPR002751,PFAM:PF01891,NCBI_GP:EGT79936.1;Name=EGT79936.1;Note=HI_1621;Ontology_term=GO:0009236,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=cobalamin biosynthetic process|0009236||;locus_tag=GGE_1781;product=putative cobalamin vitamin B12 biosynthesis CbiM;protein_id=EGT79936.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21797 22400 . - . ID=id-GGE_1781;Note=superfamily%3B label: CbiM superfamily;gbkey=misc_feature;locus_tag=GGE_1781 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21818 21857 . - . ID=id-GGE_1781-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1781 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21833 21848 . - . ID=id-GGE_1781-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1781 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21887 22298 . - . ID=id-GGE_1781-4;Dbxref=InterPro:IPR002751,PFAM:PF01891;Note=cbim~cobalamin (vitamin b12) biosynthesis cbim;gbkey=misc_feature;locus_tag=GGE_1781 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21827 21917 . + . ID=id-AFQR01000034.1:21827..21917;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21857 22193 . + . ID=id-AFQR01000034.1:21857..22193;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21866 22304 . + . ID=id-AFQR01000034.1:21866..22304;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21866 22193 . + . ID=id-AFQR01000034.1:21866..22193;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21866 22088 . + . ID=id-AFQR01000034.1:21866..22088;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21866 22007 . + . ID=id-AFQR01000034.1:21866..22007;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 21866 21920 . + . ID=id-AFQR01000034.1:21866..21920;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22293 22302 . + . ID=id-AFQR01000034.1:22293..22302;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 22417 22902 . - . ID=gene-GGE_1782;Name=GGE_1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1782 GCA_000222085.2|AFQR01000034.1 Genbank CDS 22417 22902 . - 0 ID=cds-EGT79937.1;Parent=gene-GGE_1782;Dbxref=GeneID:1176042,NCBI_GP:EGT79937.1;Name=EGT79937.1;Note=HI_1622;gbkey=CDS;locus_tag=GGE_1782;product=hypothetical protein;protein_id=EGT79937.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22432 22486 . - . ID=id-GGE_1782;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1782 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22486 22804 . + . ID=id-AFQR01000034.1:22486..22804;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22871 22880 . + . ID=id-AFQR01000034.1:22871..22880;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 22915 23598 . - . ID=gene-GGE_1783;Name=GGE_1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1783 GCA_000222085.2|AFQR01000034.1 Genbank CDS 22915 23598 . - 0 ID=cds-EGT79938.1;Parent=gene-GGE_1783;Dbxref=GeneID:1176043,InterPro:IPR019613,PFAM:PF10670,NCBI_GP:EGT79938.1;Name=EGT79938.1;Note=HI_1624;gbkey=CDS;locus_tag=GGE_1783;product=putative nickel transport complex%2C NikM subunit%2C transmembrane;protein_id=EGT79938.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22927 23587 . - . ID=id-GGE_1783;Note=superfamily%3B label: CbiK superfamily;gbkey=misc_feature;locus_tag=GGE_1783 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22972 23482 . - . ID=id-GGE_1783-2;Note=multi-dom%3B label: NikM;gbkey=misc_feature;locus_tag=GGE_1783 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 22972 23476 . - . ID=id-GGE_1783-3;Dbxref=InterPro:IPR019613,PFAM:PF10670;Note=nikm~nickel transport complex%2C nikm subunit%2C transmembrane;gbkey=misc_feature;locus_tag=GGE_1783 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23558 23567 . + . ID=id-AFQR01000034.1:23558..23567;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 23693 24100 . + . ID=gene-GGE_1784;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank CDS 23693 24100 . + 0 ID=cds-EGT79939.1;Parent=gene-GGE_1784;Dbxref=GeneID:1176215,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR015358,PFAM:PF00376,PFAM:PF09278,NCBI_GP:EGT79939.1;Name=EGT79939.1;Ontology_term=GO:0006355,GO:0000166,GO:0003700;gbkey=CDS;gene=zntR;go_function=nucleotide binding|0000166||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1784;product=HTH-type transcriptional regulator zntR;protein_id=EGT79939.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23693 24044 . + . ID=id-GGE_1784;Note=specific~superfamily%3B label: HTH_CadR-PbrR;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23693 24023 . + . ID=id-GGE_1784-2;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23693 23900 . + . ID=id-GGE_1784-3;Dbxref=InterPro:IPR000551;Note=ProfileScan:PS50937~hth_merr_2~transcription regulator hth%2C merr;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23693 23858 . + . ID=id-GGE_1784-4;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23699 24044 . + . ID=id-GGE_1784-5;Note=multi-dom%3B label: MerR;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23699 23807 . + . ID=id-GGE_1784-6;Dbxref=InterPro:IPR000551,PFAM:PF00376;Note=merr~transcription regulator hth%2C merr;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23699 23729 . + . ID=id-GGE_1784-7;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23705 23762 . + . ID=id-GGE_1784-8;Dbxref=InterPro:IPR000551;Note=PatternScan:PS00552~hth_merr_1~transcription regulator hth%2C merr;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23732 23735 . + . ID=id-GGE_1784-9;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23825 23885 . + . ID=id-GGE_1784-10;Dbxref=InterPro:IPR015358,PFAM:PF09278;Note=merr-dna-bind~dna-binding protein;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23861 23876 . + . ID=id-GGE_1784-11;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;gene=zntR;locus_tag=GGE_1784 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23756 23804 . - . ID=id-AFQR01000034.1:23756..23804;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 23759 23891 . - . ID=id-AFQR01000034.1:23759..23891;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24099 24108 . - . ID=id-AFQR01000034.1:24099..24108;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 24114 24656 . - . ID=gene-GGE_1785;Name=GGE_1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1785 GCA_000222085.2|AFQR01000034.1 Genbank CDS 24114 24656 . - 0 ID=cds-EGT79940.1;Parent=gene-GGE_1785;Dbxref=GeneID:1176044,InterPro:IPR006597,InterPro:IPR011990,PFAM:PF08238,NCBI_GP:EGT79940.1;Name=EGT79940.1;Note=HI_1625;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||;locus_tag=GGE_1785;product=putative hCP-like protein;protein_id=EGT79940.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24171 24591 . - . ID=id-GGE_1785;Note=multi-dom%3B label: COG0790;gbkey=misc_feature;locus_tag=GGE_1785 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24198 24426 . - . ID=id-GGE_1785-2;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;locus_tag=GGE_1785 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24213 24549 . - . ID=id-GGE_1785-3;Note=superfamily:SSF81901~hcp-like;gbkey=misc_feature;locus_tag=GGE_1785 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24306 24456 . - . ID=id-GGE_1785-4;Note=HMMPanther:PTHR11102~family not named;gbkey=misc_feature;locus_tag=GGE_1785 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24171 24567 . + . ID=id-AFQR01000034.1:24171..24567;Dbxref=InterPro:IPR006597,PFAM:PF08238;Note=sel1~sel1-like;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24207 24426 . + . ID=id-AFQR01000034.1:24207..24426;Dbxref=InterPro:IPR006597,PFAM:PF08238;Note=sel1~sel1-like;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24216 24318 . + . ID=id-AFQR01000034.1:24216..24318;Dbxref=InterPro:IPR006597,PFAM:PF08238;Note=superfamily~sel1~sel1-like%3B label: Sel1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24222 24420 . + . ID=id-AFQR01000034.1:24222..24420;Note=superfamily%3B label: Sel1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24249 24510 . + . ID=id-AFQR01000034.1:24249..24510;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 24657 25373 . - . ID=gene-GGE_1786;Name=GGE_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1786 GCA_000222085.2|AFQR01000034.1 Genbank CDS 24657 25373 . - 0 ID=cds-EGT79941.1;Parent=gene-GGE_1786;Dbxref=GeneID:1176046,NCBI_GP:EGT79941.1;Name=EGT79941.1;Note=HI_1626;gbkey=CDS;locus_tag=GGE_1786;product=hypothetical protein;protein_id=EGT79941.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24666 24726 . - . ID=id-GGE_1786;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1786 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24693 24756 . + . ID=id-AFQR01000034.1:24693..24756;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24705 24855 . + . ID=id-AFQR01000034.1:24705..24855;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24711 25083 . + . ID=id-AFQR01000034.1:24711..25083;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24711 24915 . + . ID=id-AFQR01000034.1:24711..24915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24714 24849 . + . ID=id-AFQR01000034.1:24714..24849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24726 25299 . + . ID=id-AFQR01000034.1:24726..25299;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24726 25173 . + . ID=id-AFQR01000034.1:24726..25173;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24726 24987 . + . ID=id-AFQR01000034.1:24726..24987;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 24726 24744 . + . ID=id-AFQR01000034.1:24726..24744;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 25522 25836 . + . ID=gene-GGE_1787;Name=GGE_1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1787 GCA_000222085.2|AFQR01000034.1 Genbank CDS 25522 25836 . + 0 ID=cds-EGT79942.1;Parent=gene-GGE_1787;Dbxref=GeneID:6136706,InterPro:IPR006175,InterPro:IPR013813,InterPro:IPR019897,PFAM:PF01042,NCBI_GP:EGT79942.1;Name=EGT79942.1;Note=HI_1627;gbkey=CDS;locus_tag=GGE_1787;product=RutC family protein;protein_id=EGT79942.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25528 25825 . + . ID=id-GGE_1787;Note=specific~superfamily%3B label: YjgF_YER057c_UK114_family superfamily;gbkey=misc_feature;locus_tag=GGE_1787 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25537 25822 . + . ID=id-GGE_1787-2;Dbxref=InterPro:IPR013813;Note=superfamily:SSF55298~yjgf-like~endoribonuclease l-psp/chorismate mutase-like;gbkey=misc_feature;locus_tag=GGE_1787 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25537 25816 . + . ID=id-GGE_1787-3;Dbxref=InterPro:IPR006175,InterPro:IPR013813;Note=Gene3D:3.30.1330.40~endoribonuclease l-psp/chorismate mutase-like~HMMPanther:PTHR11803~family not named~endoribonuclease l-psp;gbkey=misc_feature;locus_tag=GGE_1787 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25540 25816 . + . ID=id-GGE_1787-4;Dbxref=InterPro:IPR006175,PFAM:PF01042;Note=ribonuc_l-psp~endoribonuclease l-psp;gbkey=misc_feature;locus_tag=GGE_1787 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25579 25762 . - . ID=id-AFQR01000034.1:25579..25762;Dbxref=InterPro:IPR019897;Note=PatternScan:PS01094~upf0076~yjgf-like protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 25830 26270 . + . ID=gene-GGE_1788;Name=GGE_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1788 GCA_000222085.2|AFQR01000034.1 Genbank CDS 25830 26270 . + 0 ID=cds-EGT79943.1;Parent=gene-GGE_1788;Dbxref=GeneID:1176190,InterPro:IPR009386,PFAM:PF06295,NCBI_GP:EGT79943.1;Name=EGT79943.1;Note=HI_1628;gbkey=CDS;locus_tag=GGE_1788;product=hypothetical protein;protein_id=EGT79943.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25872 26229 . + . ID=id-GGE_1788;Note=superfamily%3B label: DUF1043 superfamily;gbkey=misc_feature;locus_tag=GGE_1788 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25890 25899 . + . ID=id-GGE_1788-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1788 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25902 26193 . + . ID=id-GGE_1788-3;Dbxref=InterPro:IPR009386,PFAM:PF06295;Note=duf1043~protein of unknown function duf1043;gbkey=misc_feature;locus_tag=GGE_1788 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 25896 25977 . - . ID=id-AFQR01000034.1:25896..25977;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 26717 26741 . - . ID=id-AFQR01000034.1:26717..26741;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank gene 26996 27505 . + . ID=gene-GGE_1789;Name=GGE_1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1789 GCA_000222085.2|AFQR01000034.1 Genbank CDS 26996 27505 . + 0 ID=cds-EGT79944.1;Parent=gene-GGE_1789;Dbxref=GeneID:254361871,NCBI_GP:EGT79944.1;Name=EGT79944.1;Note=ZP_04978005~MHA_1478;gbkey=CDS;locus_tag=GGE_1789;product=Hypothetical protein;protein_id=EGT79944.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank gene 28045 28386 . - . ID=gene-GGE_1790;Name=GGE_1790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1790 GCA_000222085.2|AFQR01000034.1 Genbank CDS 28045 28386 . - 0 ID=cds-EGT79945.1;Parent=gene-GGE_1790;Dbxref=GeneID:319896500,NCBI_GP:EGT79945.1;Name=EGT79945.1;Note=YP_004134693;gbkey=CDS;locus_tag=GGE_1790;product=Hypothetical protein;protein_id=EGT79945.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank gene 28636 29250 . - . ID=gene-GGE_1791;Name=GGE_1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1791 GCA_000222085.2|AFQR01000034.1 Genbank CDS 28636 29250 . - 0 ID=cds-EGT79946.1;Parent=gene-GGE_1791;Dbxref=GeneID:319896501,InterPro:IPR020088,NCBI_GP:EGT79946.1;Name=EGT79946.1;Note=YP_004134694;gbkey=CDS;locus_tag=GGE_1791;product=Hypothetical protein;protein_id=EGT79946.1;transl_table=11 GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 28702 28885 . + . ID=id-AFQR01000034.1:28702..28885;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 28828 29044 . + . ID=id-AFQR01000034.1:28828..29044;Dbxref=InterPro:IPR020088;Note=BlastProDom:PD055258~y1402_haein_p44177~uncharacterised protein family hi1402;gbkey=misc_feature GCA_000222085.2|AFQR01000034.1 Genbank sequence_feature 29006 29015 . + . ID=id-AFQR01000034.1:29006..29015;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000033.1 1 102665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000033.1 Genbank region 1 102665 . + . ID=AFQR01000033.1:1..102665;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54 63 . - . ID=id-AFQR01000033.1:54..63;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 285 300 . + . ID=id-AFQR01000033.1:285..300;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 300 501 . - . ID=id-AFQR01000033.1:300..501;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 303 522 . + . ID=id-AFQR01000033.1:303..522;Note=multi-dom%3B label: PRK11099;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 309 405 . - . ID=id-AFQR01000033.1:309..405;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 363 393 . - . ID=id-AFQR01000033.1:363..393;Dbxref=InterPro:IPR007272,PFAM:PF04143;Note=duf395~domain of unknown function duf395%2C yeee/yede;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 603 824 . + . ID=gene-GGE_1670;Name=GGE_1670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1670 GCA_000222085.2|AFQR01000033.1 Genbank CDS 603 824 . + 0 ID=cds-EGT80162.1;Parent=gene-GGE_1670;Dbxref=GeneID:325577642,InterPro:IPR001455,PFAM:PF01206,NCBI_GP:EGT80162.1;Name=EGT80162.1;Note=ZP_08147917;Ontology_term=GO:0008033,GO:0005737,GO:0016783;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=sulfurtransferase activity|0016783||;go_process=tRNA processing|0008033||;locus_tag=GGE_1670;product=transcription regulator;protein_id=EGT80162.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 609 819 . + . ID=id-GGE_1670;Dbxref=InterPro:IPR001455;Note=superfamily:SSF64307~sira_like~sira-like;gbkey=misc_feature;locus_tag=GGE_1670 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 618 810 . + . ID=id-GGE_1670-2;Dbxref=InterPro:IPR001455;Note=Gene3D:3.30.110.40~sira_like~sira-like;gbkey=misc_feature;locus_tag=GGE_1670 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 624 804 . + . ID=id-GGE_1670-3;Dbxref=InterPro:IPR001455,PFAM:PF01206;Note=sira~sira-like;gbkey=misc_feature;locus_tag=GGE_1670 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 630 798 . + . ID=id-GGE_1670-4;Note=specific~superfamily%3B label: SirA_YedF_YeeD;gbkey=misc_feature;locus_tag=GGE_1670 GCA_000222085.2|AFQR01000033.1 Genbank gene 888 1355 . - . ID=gene-GGE_1671;Name=GGE_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1671 GCA_000222085.2|AFQR01000033.1 Genbank CDS 888 1355 . - 0 ID=cds-EGT80163.1;Parent=gene-GGE_1671;Dbxref=GeneID:1176197,InterPro:IPR004375,PFAM:PF04074,TIGRFAM:TIGR00022,NCBI_GP:EGT80163.1;Name=EGT80163.1;Note=HI_0227;gbkey=CDS;locus_tag=GGE_1671;product=Hypothetical protein;protein_id=EGT80163.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 888 1353 . - . ID=id-GGE_1671;Dbxref=InterPro:IPR004375,TIGRFAM:TIGR00022;Note=tigr00022: hypothetical protein%2C yhch/yj~conserved hypothetical protein chp00022~superfamily:SSF51197~clavaminate synthase-like;gbkey=misc_feature;locus_tag=GGE_1671 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 888 1350 . - . ID=id-GGE_1671-2;Dbxref=InterPro:IPR004375;Note=Gene3D:2.60.120.370~conserved hypothetical protein chp00022;gbkey=misc_feature;locus_tag=GGE_1671 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 888 1344 . - . ID=id-GGE_1671-3;Dbxref=InterPro:IPR004375,PFAM:PF04074;Note=duf386~conserved hypothetical protein chp00022;gbkey=misc_feature;locus_tag=GGE_1671 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 888 1311 . - . ID=id-GGE_1671-4;Note=superfamily%3B label: DUF386 superfamily;gbkey=misc_feature;locus_tag=GGE_1671 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 930 1314 . + . ID=id-AFQR01000033.1:930..1314;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 1598 3727 . + . ID=gene-GGE_1672;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank CDS 1598 3727 . + 0 ID=cds-EGT80164.1;Parent=gene-GGE_1672;Dbxref=GeneID:81336747,InterPro:IPR001247,InterPro:IPR003029,InterPro:IPR004088,InterPro:IPR012162,InterPro:IPR012340,InterPro:IPR015847,InterPro:IPR015848,InterPro:IPR016027,InterPro:IPR018111,InterPro:IPR020568,PFAM:PF00013,PFAM:PF00575,PFAM:PF01138,PFAM:PF03725,PFAM:PF03726,PIR:PIRSF005499,TIGRFAM:TIGR03591,NCBI_GP:EGT80164.1;Name=EGT80164.1;Ontology_term=GO:0006396,GO:0006402,GO:0000175,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=3'-5'-exoribonuclease activity|0000175||,RNA binding|0003723||,polyribonucleotide nucleotidyltransferase activity|0004654||;go_process=RNA processing|0006396||,mRNA catabolic process|0006402||;locus_tag=GGE_1672;product=Polyribonucleotide nucleotidyltransferase;protein_id=EGT80164.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1598 3725 . + . ID=id-GGE_1672;Dbxref=InterPro:IPR012162,PIR:PIRSF005499;Note=polyribonucleotide nucleotidyltransferase~polyribonucleotide nucleotidyltransferase;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1598 2027 . + . ID=id-GGE_1672-2;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1604 3674 . + . ID=id-GGE_1672-3;Dbxref=InterPro:IPR012162;Note=HMMPanther:PTHR11252~family not named~polyribonucleotide nucleotidyltransferase;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1604 3671 . + . ID=id-GGE_1672-4;Dbxref=InterPro:IPR012162;Note=HAMAP:MF_01595~pnpase~polyribonucleotide nucleotidyltransferase;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1604 3668 . + . ID=id-GGE_1672-5;Note=multi-dom%3B label: PRK11824;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1625 3647 . + . ID=id-GGE_1672-6;Dbxref=InterPro:IPR012162,TIGRFAM:TIGR03591;Note=polynuc_phos: polyribonucleotide nucleot~polyribonucleotide nucleotidyltransferase;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1640 1988 . + . ID=id-GGE_1672-7;Note=superfamily%3B label: RNase_PH superfamily;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1643 1985 . + . ID=id-GGE_1672-8;Dbxref=InterPro:IPR001247,PFAM:PF01138;Note=rnase_ph~exoribonuclease%2C phosphorolytic domain 1;gbkey=misc_feature;gene=pnp;locus_tag=GGE_1672 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1619 2225 . - . ID=id-AFQR01000033.1:1619..2225;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1628 3431 . - . ID=id-AFQR01000033.1:1628..3431;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1643 3335 . - . ID=id-AFQR01000033.1:1643..3335;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1757 3263 . - . ID=id-AFQR01000033.1:1757..3263;Dbxref=InterPro:IPR018111,PFAM:PF00013;Note=kh_1~k homology%2C type 1%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1760 3254 . - . ID=id-AFQR01000033.1:1760..3254;Note=specific~superfamily%3B label: KH-I superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1778 3254 . - . ID=id-AFQR01000033.1:1778..3254;Dbxref=InterPro:IPR004088;Note=ProfileScan:PS50084~kh_type_1~k homology%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1787 2036 . - . ID=id-AFQR01000033.1:1787..2036;Note=superfamily%3B label: RNase_PH_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1790 2036 . - . ID=id-AFQR01000033.1:1790..2036;Dbxref=InterPro:IPR015847,PFAM:PF03725;Note=rnase_ph_c~exoribonuclease%2C phosphorolytic domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1802 3461 . - . ID=id-AFQR01000033.1:1802..3461;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1802 3248 . - . ID=id-AFQR01000033.1:1802..3248;Note=Gene3D:3.30.1370.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1805 3461 . - . ID=id-AFQR01000033.1:1805..3461;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1805 2978 . - . ID=id-AFQR01000033.1:1805..2978;Note=superfamily%3B label: RNase_PH_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1811 2972 . - . ID=id-AFQR01000033.1:1811..2972;Dbxref=InterPro:IPR015847,PFAM:PF03725;Note=rnase_ph_c~exoribonuclease%2C phosphorolytic domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1814 3452 . - . ID=id-AFQR01000033.1:1814..3452;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1823 3452 . - . ID=id-AFQR01000033.1:1823..3452;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1835 2321 . - . ID=id-AFQR01000033.1:1835..2321;Dbxref=InterPro:IPR015848,PFAM:PF03726;Note=pnpase~polynucleotide phosphorylase%2C phosphorolytic rna-binding%2C bacterial/organelle-type;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1838 2318 . - . ID=id-AFQR01000033.1:1838..2318;Note=superfamily%3B label: PNPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1853 3452 . - . ID=id-AFQR01000033.1:1853..3452;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1880 2030 . - . ID=id-AFQR01000033.1:1880..2030;Dbxref=InterPro:IPR015847;Note=superfamily:SSF55666~ribonuclease ph domain 2-like~exoribonuclease%2C phosphorolytic domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1889 3215 . - . ID=id-AFQR01000033.1:1889..3215;Note=superfamily:SSF54791~eukaryotic type kh-domain (kh-domain type i);gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1898 2273 . - . ID=id-AFQR01000033.1:1898..2273;Dbxref=InterPro:IPR015848;Note=Gene3D:1.10.10.400~polynucleotide phosphorylase%2C phosphorolytic rna-binding%2C bacterial/organelle-type;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1901 2273 . - . ID=id-AFQR01000033.1:1901..2273;Dbxref=InterPro:IPR015848;Note=superfamily:SSF46915~polynucleotide phosphorylase/guanosine pentaphosphate synthase (pnpase/gpsi)%2C domain 3~polynucleotide phosphorylase%2C phosphorolytic rna-binding%2C bacterial/organelle-type;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1922 2954 . - . ID=id-AFQR01000033.1:1922..2954;Dbxref=InterPro:IPR015847;Note=superfamily:SSF55666~ribonuclease ph domain 2-like~exoribonuclease%2C phosphorolytic domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1994 2570 . - . ID=id-AFQR01000033.1:1994..2570;Note=superfamily%3B label: RNase_PH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 1997 2567 . - . ID=id-AFQR01000033.1:1997..2567;Dbxref=InterPro:IPR001247,PFAM:PF01138;Note=rnase_ph~exoribonuclease%2C phosphorolytic domain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 2009 2561 . - . ID=id-AFQR01000033.1:2009..2561;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 3809 4753 . + . ID=gene-GGE_1673;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank CDS 3809 4753 . + 0 ID=cds-EGT80165.1;Parent=gene-GGE_1673;Dbxref=GeneID:1176173,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,NCBI_GP:EGT80165.1;Name=EGT80165.1;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;gene=nlpI;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_1673;product=Lipoprotein nlpI;protein_id=EGT80165.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3809 3887 . + . ID=id-GGE_1673;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3833 4706 . + . ID=id-GGE_1673-2;Note=multi-dom%3B label: PRK11189;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3845 3878 . + . ID=id-GGE_1673-3;Note=transmembrane_regions;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3956 4553 . + . ID=id-GGE_1673-4;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4016 4487 . + . ID=id-GGE_1673-5;Note=HMMPanther:PTHR23083~family not named;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4019 4439 . + . ID=id-GGE_1673-6;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4031 4115 . + . ID=id-GGE_1673-7;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4721 4730 . + . ID=id-GGE_1673-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nlpI;locus_tag=GGE_1673 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3863 4148 . - . ID=id-AFQR01000033.1:3863..4148;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3911 4547 . - . ID=id-AFQR01000033.1:3911..4547;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3911 4235 . - . ID=id-AFQR01000033.1:3911..4235;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3911 4133 . - . ID=id-AFQR01000033.1:3911..4133;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 3911 4031 . - . ID=id-AFQR01000033.1:3911..4031;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 4874 6712 . + . ID=gene-GGE_1674;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank CDS 4874 6712 . + 0 ID=cds-EGT80166.1;Parent=gene-GGE_1674;Dbxref=GeneID:1169261,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR005580,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,PFAM:PF00270,PFAM:PF00271,PFAM:PF03880,NCBI_GP:EGT80166.1;Name=EGT80166.1;Ontology_term=GO:0005524,GO:0008026,GO:0004386,GO:0003676;gbkey=CDS;gene=deaD;go_function=ATP binding|0005524||,ATP-dependent helicase activity|0008026||,helicase activity|0004386||,nucleic acid binding|0003676||;locus_tag=GGE_1674;product=Cold-shock DEAD box protein A;protein_id=EGT80166.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4886 5480 . + . ID=id-GGE_1674;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4889 4961 . + . ID=id-GGE_1674-2;Dbxref=InterPro:IPR014014;Note=ProfileScan:PS51195~q_motif~rna helicase%2C dead-box type%2C q motif;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4892 6683 . + . ID=id-GGE_1674-3;Note=HMMPanther:PTHR24031:SF163~subfamily not named~HMMPanther:PTHR24031~family not named;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4892 6407 . + . ID=id-GGE_1674-4;Note=multi-dom%3B label: SrmB;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4895 5480 . + . ID=id-GGE_1674-5;Note=specific~superfamily%3B label: DEADc;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4964 5369 . + . ID=id-GGE_1674-6;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4982 5390 . + . ID=id-GGE_1674-7;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5090 5747 . + . ID=id-GGE_1674-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=deaD;locus_tag=GGE_1674 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4901 5333 . - . ID=id-AFQR01000033.1:4901..5333;Dbxref=InterPro:IPR000629;Note=PatternScan:PS00039~dead_atp_helicase~rna helicase%2C atp-dependent%2C dead-box%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4913 5867 . - . ID=id-AFQR01000033.1:4913..5867;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4928 6200 . - . ID=id-AFQR01000033.1:4928..6200;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 4940 6563 . - . ID=id-AFQR01000033.1:4940..6563;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5084 6311 . - . ID=id-AFQR01000033.1:5084..6311;Dbxref=InterPro:IPR005580,PFAM:PF03880;Note=dbpa~dbpa%2C rna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5090 6311 . - . ID=id-AFQR01000033.1:5090..6311;Note=superfamily%3B label: DbpA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5105 5663 . - . ID=id-AFQR01000033.1:5105..5663;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5195 5546 . - . ID=id-AFQR01000033.1:5195..5546;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5318 5567 . - . ID=id-AFQR01000033.1:5318..5567;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 5378 5492 . - . ID=id-AFQR01000033.1:5378..5492;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6668 6677 . - . ID=id-AFQR01000033.1:6668..6677;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 6801 8333 . + . ID=gene-GGE_1675;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank CDS 6801 8333 . + 0 ID=cds-EGT80167.1;Parent=gene-GGE_1675;Dbxref=InterPro:IPR000189,InterPro:IPR001638,InterPro:IPR008258,InterPro:IPR023346,PFAM:PF00497,PFAM:PF01464,NCBI_GP:EGT80167.1;Name=EGT80167.1;Ontology_term=GO:0000270,GO:0006810,GO:0016020,GO:0030288,GO:0008933,GO:0005215;gbkey=CDS;gene=mltF;go_component=membrane|0016020||,outer membrane-bounded periplasmic space|0030288||;go_function=lytic transglycosylase activity|0008933||,transporter activity|0005215||;go_process=peptidoglycan metabolic process|0000270||,transport|0006810||;locus_tag=GGE_1675;product=Membrane-bound lytic murein transglycosylase F;protein_id=EGT80167.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6897 8211 . + . ID=id-GGE_1675;Note=HAMAP:MF_02016~mltf;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6942 8121 . + . ID=id-GGE_1675-2;Note=multi-dom%3B label: PRK10859;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6945 7227 . + . ID=id-GGE_1675-3;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7002 7482 . + . ID=id-GGE_1675-4;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7017 7464 . + . ID=id-GGE_1675-5;Dbxref=InterPro:IPR001638,PFAM:PF00497;Note=sbp_bac_3~extracellular solute-binding protein%2C family 3;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7017 7461 . + . ID=id-GGE_1675-6;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7458 7659 . + . ID=id-GGE_1675-7;Note=HMMPanther:PTHR21666:SF53~subfamily not named~HMMPanther:PTHR21666~family not named;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8283 8292 . + . ID=id-GGE_1675-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mltF;locus_tag=GGE_1675 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6840 8274 . - . ID=id-AFQR01000033.1:6840..8274;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6849 6894 . - . ID=id-AFQR01000033.1:6849..6894;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6870 6891 . - . ID=id-AFQR01000033.1:6870..6891;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6888 7806 . - . ID=id-AFQR01000033.1:6888..7806;Dbxref=InterPro:IPR000189;Note=PatternScan:PS00922~transglycosylase~prokaryotic transglycosylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 6888 7329 . - . ID=id-AFQR01000033.1:6888..7329;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7080 7788 . - . ID=id-AFQR01000033.1:7080..7788;Note=specific~superfamily%3B label: LT_GEWL;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7119 7764 . - . ID=id-AFQR01000033.1:7119..7764;Dbxref=InterPro:IPR008258,PFAM:PF01464;Note=slt~lytic transglycosylase-like%2C catalytic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7320 7740 . - . ID=id-AFQR01000033.1:7320..7740;Note=Gene3D:1.10.530.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 7398 7602 . - . ID=id-AFQR01000033.1:7398..7602;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 8335 8487 . + . ID=gene-GGE_1676;Name=GGE_1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1676 GCA_000222085.2|AFQR01000033.1 Genbank CDS 8335 8487 . + 0 ID=cds-EGT80168.1;Parent=gene-GGE_1676;Dbxref=GeneID:1175194,NCBI_GP:EGT80168.1;Name=EGT80168.1;Note=HI_0233;gbkey=CDS;locus_tag=GGE_1676;product=hypothetical protein;protein_id=EGT80168.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8377 8401 . + . ID=id-GGE_1676;Note=seg;gbkey=misc_feature;locus_tag=GGE_1676 GCA_000222085.2|AFQR01000033.1 Genbank gene 8569 9180 . - . ID=gene-GGE_1677;Name=GGE_1677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1677 GCA_000222085.2|AFQR01000033.1 Genbank CDS 8569 9180 . - 0 ID=cds-EGT80169.1;Parent=gene-GGE_1677;Dbxref=GeneID:325576520,InterPro:IPR009898,PFAM:PF07274,NCBI_GP:EGT80169.1;Name=EGT80169.1;Note=ZP_08147273;gbkey=CDS;locus_tag=GGE_1677;product=inner membrane protein YagU;protein_id=EGT80169.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8608 8629 . - . ID=id-GGE_1677;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1677 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8650 9043 . - . ID=id-GGE_1677-2;Dbxref=InterPro:IPR009898,PFAM:PF07274;Note=duf1440~protein of unknown function duf1440;gbkey=misc_feature;locus_tag=GGE_1677 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8662 9031 . - . ID=id-GGE_1677-3;Note=superfamily%3B label: DUF1440 superfamily;gbkey=misc_feature;locus_tag=GGE_1677 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8605 8839 . + . ID=id-AFQR01000033.1:8605..8839;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8614 8617 . + . ID=id-AFQR01000033.1:8614..8617;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8638 8971 . + . ID=id-AFQR01000033.1:8638..8971;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 8638 8869 . + . ID=id-AFQR01000033.1:8638..8869;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9214 9223 . - . ID=id-AFQR01000033.1:9214..9223;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 9323 9577 . - . ID=gene-GGE_1678;Name=GGE_1678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1678 GCA_000222085.2|AFQR01000033.1 Genbank CDS 9323 9577 . - 0 ID=cds-EGT80170.1;Parent=gene-GGE_1678;Dbxref=GeneID:260582880,NCBI_GP:EGT80170.1;Name=EGT80170.1;Note=ZP_05850665;gbkey=CDS;locus_tag=GGE_1678;product=dithiobiotin synthetase;protein_id=EGT80170.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9434 9467 . - . ID=id-GGE_1678;Note=BlastProDom:PD050153~q4qnv2_haei8_q4qnv2;gbkey=misc_feature;locus_tag=GGE_1678 GCA_000222085.2|AFQR01000033.1 Genbank gene 9641 9886 . - . ID=gene-GGE_1679;Name=GGE_1679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1679 GCA_000222085.2|AFQR01000033.1 Genbank CDS 9641 9886 . - 0 ID=cds-EGT80171.1;Parent=gene-GGE_1679;Dbxref=GeneID:1176214,InterPro:IPR005589,PFAM:PF03889,NCBI_GP:EGT80171.1;Name=EGT80171.1;Note=HI_0235;gbkey=CDS;locus_tag=GGE_1679;product=hypothetical protein;protein_id=EGT80171.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9686 9815 . - . ID=id-GGE_1679;Note=superfamily%3B label: DUF331 superfamily;gbkey=misc_feature;locus_tag=GGE_1679 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9701 9758 . - . ID=id-GGE_1679-2;Dbxref=InterPro:IPR005589,PFAM:PF03889;Note=duf331~protein of unknown function duf331;gbkey=misc_feature;locus_tag=GGE_1679 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9860 9869 . - . ID=id-GGE_1679-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1679 GCA_000222085.2|AFQR01000033.1 Genbank gene 9954 10304 . - . ID=gene-GGE_1680;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=GGE_1680 GCA_000222085.2|AFQR01000033.1 Genbank CDS 9954 10304 . - 0 ID=cds-EGT80172.1;Parent=gene-GGE_1680;Dbxref=InterPro:IPR006659,InterPro:IPR006660,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF03960,TIGRFAM:TIGR00014,NCBI_GP:EGT80172.1;Name=EGT80172.1;Ontology_term=GO:0055114,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1680;product=Putative arsenate reductase;protein_id=EGT80172.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9960 10299 . - . ID=id-GGE_1680;Dbxref=InterPro:IPR006660,InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold~ProfileScan:PS51353~arsc~arsenate reductase-like;gbkey=misc_feature;gene=arsC;locus_tag=GGE_1680 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9963 10296 . - . ID=id-GGE_1680-2;Dbxref=InterPro:IPR006659,TIGRFAM:TIGR00014;Note=arsc: arsenate reductase (glutaredoxin)~arsenate reductase;gbkey=misc_feature;gene=arsC;locus_tag=GGE_1680 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9963 10293 . - . ID=id-GGE_1680-3;Dbxref=InterPro:IPR012335;Note=specific~superfamily~Gene3D:3.40.30.10~thioredoxin fold%3B label: ArsC_ArsC;gbkey=misc_feature;gene=arsC;locus_tag=GGE_1680 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 9972 10287 . - . ID=id-GGE_1680-4;Dbxref=InterPro:IPR006660,PFAM:PF03960;Note=arsc~arsenate reductase-like;gbkey=misc_feature;gene=arsC;locus_tag=GGE_1680 GCA_000222085.2|AFQR01000033.1 Genbank gene 10382 11431 . + . ID=gene-GGE_1681;Name=perM;gbkey=Gene;gene=perM;gene_biotype=protein_coding;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank CDS 10382 11431 . + 0 ID=cds-EGT80173.1;Parent=gene-GGE_1681;Dbxref=GeneID:2506918,InterPro:IPR002549,PFAM:PF01594,NCBI_GP:EGT80173.1;Name=EGT80173.1;gbkey=CDS;gene=perM;locus_tag=GGE_1681;product=Putative permease perM;protein_id=EGT80173.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10394 11417 . + . ID=id-GGE_1681;Note=multi-dom%3B label: yhhT;gbkey=misc_feature;gene=perM;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10433 11372 . + . ID=id-GGE_1681-2;Dbxref=InterPro:IPR002549;Note=HMMPanther:PTHR21716~family not named~uncharacterised protein family upf0118;gbkey=misc_feature;gene=perM;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10436 11372 . + . ID=id-GGE_1681-3;Note=superfamily%3B label: UPF0118 superfamily;gbkey=misc_feature;gene=perM;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10442 11363 . + . ID=id-GGE_1681-4;Dbxref=InterPro:IPR002549,PFAM:PF01594;Note=upf0118~uncharacterised protein family upf0118;gbkey=misc_feature;gene=perM;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10445 10478 . + . ID=id-GGE_1681-5;Note=transmembrane_regions;gbkey=misc_feature;gene=perM;locus_tag=GGE_1681 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10424 11336 . - . ID=id-AFQR01000033.1:10424..11336;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 11315 . - . ID=id-AFQR01000033.1:10451..11315;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 11222 . - . ID=id-AFQR01000033.1:10451..11222;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 11126 . - . ID=id-AFQR01000033.1:10451..11126;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 11045 . - . ID=id-AFQR01000033.1:10451..11045;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 10850 . - . ID=id-AFQR01000033.1:10451..10850;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 10451 10583 . - . ID=id-AFQR01000033.1:10451..10583;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 11527 12504 . - . ID=gene-GGE_1682;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank CDS 11527 12504 . - 0 ID=cds-EGT80174.1;Parent=gene-GGE_1682;Dbxref=GeneID:1173416,InterPro:IPR005665,InterPro:IPR022645,InterPro:IPR022646,InterPro:IPR022813,PFAM:PF02355,PFAM:PF07549,TIGRFAM:TIGR00916,TIGRFAM:TIGR00966,NCBI_GP:EGT80174.1;Name=EGT80174.1;Ontology_term=GO:0006886,GO:0015450;gbkey=CDS;gene=secF;go_function=P-P-bond-hydrolysis-driven protein transmembrane transporter activity|0015450||;go_process=intracellular protein transport|0006886||;locus_tag=GGE_1682;product=Protein-export membrane protein secF;protein_id=EGT80174.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11611 12382 . - . ID=id-GGE_1682;Note=multi-dom%3B label: secF;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11692 12259 . - . ID=id-GGE_1682-2;Dbxref=InterPro:IPR005665,TIGRFAM:TIGR00966;Note=3a0501s07: protein-export membrane protein~secf protein;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11785 12205 . - . ID=id-GGE_1682-3;Note=superfamily:SSF82866~multidrug efflux transporter acrb transmembrane domain;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11887 12094 . - . ID=id-GGE_1682-4;Note=superfamily%3B label: SecD_SecF superfamily;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11890 12082 . - . ID=id-GGE_1682-5;Dbxref=InterPro:IPR022813,PFAM:PF02355;Note=secd_secf~preprotein translocase%2C secd/secf/secdf;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11902 12040 . - . ID=id-GGE_1682-6;Dbxref=InterPro:IPR022645,TIGRFAM:TIGR00916;Note=2a0604s01: protein-export membrane protein%2C~secd/secf/secdf export membrane protein%2C bacteria;gbkey=misc_feature;gene=secF;locus_tag=GGE_1682 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11545 12418 . + . ID=id-AFQR01000033.1:11545..12418;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11572 12025 . + . ID=id-AFQR01000033.1:11572..12025;Dbxref=InterPro:IPR005665;Note=FPrintScan:PR01755~secftrnlcase~secf protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11575 12265 . + . ID=id-AFQR01000033.1:11575..12265;Dbxref=InterPro:IPR005665;Note=FPrintScan:PR01755~secftrnlcase~secf protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11575 11689 . + . ID=id-AFQR01000033.1:11575..11689;Dbxref=InterPro:IPR005665;Note=FPrintScan:PR01755~secftrnlcase~secf protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11581 11632 . + . ID=id-AFQR01000033.1:11581..11632;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11584 12169 . + . ID=id-AFQR01000033.1:11584..12169;Dbxref=InterPro:IPR005665;Note=FPrintScan:PR01755~secftrnlcase~secf protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11587 11974 . + . ID=id-AFQR01000033.1:11587..11974;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11596 12370 . + . ID=id-AFQR01000033.1:11596..12370;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11596 12289 . + . ID=id-AFQR01000033.1:11596..12289;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11596 12133 . + . ID=id-AFQR01000033.1:11596..12133;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11596 12052 . + . ID=id-AFQR01000033.1:11596..12052;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11611 11677 . + . ID=id-AFQR01000033.1:11611..11677;Dbxref=InterPro:IPR022646,PFAM:PF07549;Note=sec_gg~secd/secf/secdf export membrane protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 11614 11677 . + . ID=id-AFQR01000033.1:11614..11677;Note=superfamily%3B label: Sec_GG superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 12512 14362 . - . ID=gene-GGE_1683;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=GGE_1683 GCA_000222085.2|AFQR01000033.1 Genbank CDS 12512 14362 . - 0 ID=cds-EGT80175.1;Parent=gene-GGE_1683;Dbxref=GeneID:1173414,InterPro:IPR001036,InterPro:IPR005791,InterPro:IPR022645,InterPro:IPR022646,InterPro:IPR022813,PFAM:PF02355,PFAM:PF07549,TIGRFAM:TIGR00916,TIGRFAM:TIGR01129,NCBI_GP:EGT80175.1;Name=EGT80175.1;Ontology_term=GO:0006886,GO:0006810,GO:0016020,GO:0015450,GO:0005215;gbkey=CDS;gene=secD;go_component=membrane|0016020||;go_function=P-P-bond-hydrolysis-driven protein transmembrane transporter activity|0015450||,transporter activity|0005215||;go_process=intracellular protein transport|0006886||,transport|0006810||;locus_tag=GGE_1683;product=Protein-export membrane protein secD;protein_id=EGT80175.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12533 12581 . - . ID=id-GGE_1683;Note=transmembrane_regions;gbkey=misc_feature;gene=secD;locus_tag=GGE_1683 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12848 14021 . - . ID=id-GGE_1683-2;Note=multi-dom%3B label: secD;gbkey=misc_feature;gene=secD;locus_tag=GGE_1683 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12881 13952 . - . ID=id-GGE_1683-3;Dbxref=InterPro:IPR005791,TIGRFAM:TIGR01129;Note=secd: protein-export membrane protein secd~secd export membrane protein;gbkey=misc_feature;gene=secD;locus_tag=GGE_1683 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 13229 13634 . - . ID=id-GGE_1683-4;Note=superfamily:SSF82866~multidrug efflux transporter acrb transmembrane domain;gbkey=misc_feature;gene=secD;locus_tag=GGE_1683 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12557 12803 . + . ID=id-AFQR01000033.1:12557..12803;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12572 13874 . + . ID=id-AFQR01000033.1:12572..13874;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12578 12944 . + . ID=id-AFQR01000033.1:12578..12944;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12581 14249 . + . ID=id-AFQR01000033.1:12581..14249;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12581 14153 . + . ID=id-AFQR01000033.1:12581..14153;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12581 14024 . + . ID=id-AFQR01000033.1:12581..14024;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12581 13946 . + . ID=id-AFQR01000033.1:12581..13946;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12584 14249 . + . ID=id-AFQR01000033.1:12584..14249;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12584 13862 . + . ID=id-AFQR01000033.1:12584..13862;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12587 14024 . + . ID=id-AFQR01000033.1:12587..14024;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12605 12848 . + . ID=id-AFQR01000033.1:12605..12848;Dbxref=InterPro:IPR022646,PFAM:PF07549;Note=sec_gg~secd/secf/secdf export membrane protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12608 12848 . + . ID=id-AFQR01000033.1:12608..12848;Note=superfamily%3B label: Sec_GG superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 12980 13832 . + . ID=id-AFQR01000033.1:12980..13832;Note=superfamily%3B label: SecD_SecF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 13004 13814 . + . ID=id-AFQR01000033.1:13004..13814;Dbxref=InterPro:IPR022813,PFAM:PF02355;Note=secd_secf~preprotein translocase%2C secd/secf/secdf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 13262 13550 . + . ID=id-AFQR01000033.1:13262..13550;Dbxref=InterPro:IPR022645,TIGRFAM:TIGR00916;Note=2a0604s01: protein-export membrane protein%2C~secd/secf/secdf export membrane protein%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 14432 14725 . - . ID=gene-GGE_1684;Name=GGE_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank CDS 14432 14725 . - 0 ID=cds-EGT80176.1;Parent=gene-GGE_1684;Dbxref=GeneID:1175517,InterPro:IPR003849,PFAM:PF02699,TIGRFAM:TIGR00739,NCBI_GP:EGT80176.1;Name=EGT80176.1;Note=HI_0241;gbkey=CDS;locus_tag=GGE_1684;product=UPF0092 membrane protein;protein_id=EGT80176.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14432 14723 . - . ID=id-GGE_1684;Note=superfamily%3B label: YajC superfamily;gbkey=misc_feature;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14447 14690 . - . ID=id-GGE_1684-2;Dbxref=InterPro:IPR003849,TIGRFAM:TIGR00739;Note=yajc: preprotein translocase%2C yajc subunit~preprotein translocase yajc;gbkey=misc_feature;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14450 14684 . - . ID=id-GGE_1684-3;Dbxref=InterPro:IPR003849,PFAM:PF02699;Note=yajc~preprotein translocase yajc;gbkey=misc_feature;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14453 14495 . - . ID=id-GGE_1684-4;Dbxref=InterPro:IPR003849;Note=FPrintScan:PR01853~yajctrnlcase~preprotein translocase yajc;gbkey=misc_feature;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14462 14492 . - . ID=id-GGE_1684-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1684 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14489 14567 . + . ID=id-AFQR01000033.1:14489..14567;Dbxref=InterPro:IPR003849;Note=FPrintScan:PR01853~yajctrnlcase~preprotein translocase yajc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 14835 15056 . - . ID=gene-GGE_1685;Name=GGE_1685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank CDS 14835 15056 . - 0 ID=cds-EGT80177.1;Parent=gene-GGE_1685;Dbxref=GeneID:1175198,InterPro:IPR001455,PFAM:PF01206,NCBI_GP:EGT80177.1;Name=EGT80177.1;Note=HI_0242;Ontology_term=GO:0008033,GO:0005737,GO:0016783;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=sulfurtransferase activity|0016783||;go_process=tRNA processing|0008033||;locus_tag=GGE_1685;product=UPF0033 protein;protein_id=EGT80177.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14841 15051 . - . ID=id-GGE_1685;Dbxref=InterPro:IPR001455;Note=Gene3D:3.30.110.40~sira-like;gbkey=misc_feature;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14844 15045 . - . ID=id-GGE_1685-2;Dbxref=InterPro:IPR001455;Note=superfamily:SSF64307~sira-like~sira-like;gbkey=misc_feature;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14847 15042 . - . ID=id-GGE_1685-3;Dbxref=InterPro:IPR001455,PFAM:PF01206;Note=specific~superfamily~sira~sira-like%3B label: SirA_YedF_YeeD;gbkey=misc_feature;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14850 14910 . - . ID=id-GGE_1685-4;Dbxref=InterPro:IPR001455;Note=PatternScan:PS01148~upf0033~sira-like;gbkey=misc_feature;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 14931 14940 . - . ID=id-GGE_1685-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1685 GCA_000222085.2|AFQR01000033.1 Genbank gene 15053 15613 . - . ID=gene-GGE_1686;Name=GGE_1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1686 GCA_000222085.2|AFQR01000033.1 Genbank CDS 15053 15613 . - 0 ID=cds-EGT80178.1;Parent=gene-GGE_1686;Dbxref=GeneID:1175199,InterPro:IPR012312,PFAM:PF01814,NCBI_GP:EGT80178.1;Name=EGT80178.1;Note=HI_0243;gbkey=CDS;locus_tag=GGE_1686;product=putative hemerythrin HHE cation-binding domain-containing protein;protein_id=EGT80178.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15098 15560 . - . ID=id-GGE_1686;Note=Gene3D:1.20.120.520;gbkey=misc_feature;locus_tag=GGE_1686 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15140 15242 . - . ID=id-GGE_1686-2;Dbxref=InterPro:IPR012312,PFAM:PF01814;Note=hemerythrin~haemerythrin/hhe cation-binding motif;gbkey=misc_feature;locus_tag=GGE_1686 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15140 15398 . + . ID=id-AFQR01000033.1:15140..15398;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15212 15365 . + . ID=id-AFQR01000033.1:15212..15365;Dbxref=InterPro:IPR012312,PFAM:PF01814;Note=hemerythrin~haemerythrin/hhe cation-binding motif;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15588 15597 . + . ID=id-AFQR01000033.1:15588..15597;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 15636 17006 . - . ID=gene-GGE_1687;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank CDS 15636 17006 . - 0 ID=cds-EGT80179.1;Parent=gene-GGE_1687;Dbxref=GeneID:1174661,InterPro:IPR002616,InterPro:IPR004803,PFAM:PF01702,TIGRFAM:TIGR00430,TIGRFAM:TIGR00449,NCBI_GP:EGT80179.1;Name=EGT80179.1;Ontology_term=GO:0008616,GO:0006400,GO:0008033,GO:0008479;gbkey=CDS;gene=tgt;go_function=queuine tRNA-ribosyltransferase activity|0008479||;go_process=queuosine biosynthetic process|0008616||,tRNA modification|0006400||,tRNA processing|0008033||;locus_tag=GGE_1687;product=Queuine tRNA-ribosyltransferase;protein_id=EGT80179.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15852 16755 . - . ID=id-GGE_1687;Dbxref=InterPro:IPR002616;Note=superfamily:SSF51713~trna-guanine transglycosylase~queuine/other trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15855 16752 . - . ID=id-GGE_1687-2;Dbxref=InterPro:IPR002616;Note=Gene3D:3.20.20.105~queuine/other trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15855 16701 . - . ID=id-GGE_1687-3;Note=superfamily%3B label: TGT superfamily;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15858 16770 . - . ID=id-GGE_1687-4;Dbxref=InterPro:IPR002616;Note=HMMPanther:PTHR11962~family not named~queuine/other trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15861 16725 . - . ID=id-GGE_1687-5;Dbxref=InterPro:IPR004803;Note=HAMAP:MF_00168~q_trna_tgt~queuine trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15867 16752 . - . ID=id-GGE_1687-6;Dbxref=InterPro:IPR002616,InterPro:IPR004803,TIGRFAM:TIGR00430,TIGRFAM:TIGR00449;Note=q_trna_tgt: queuine trna-ribosyltransfera~queuine trna-ribosyltransferase~tgt_general: trna-guanine transglycosylas~queuine/other trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 16245 16350 . - . ID=id-GGE_1687-7;Dbxref=InterPro:IPR002616,PFAM:PF01702;Note=tgt~queuine/other trna-ribosyltransferase;gbkey=misc_feature;gene=tgt;locus_tag=GGE_1687 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 15672 16920 . + . ID=id-AFQR01000033.1:15672..16920;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 17129 18220 . - . ID=gene-GGE_1688;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=GGE_1688 GCA_000222085.2|AFQR01000033.1 Genbank CDS 17129 18220 . - 0 ID=cds-EGT80180.1;Parent=gene-GGE_1688;Dbxref=GeneID:1172814,InterPro:IPR003699,PFAM:PF02547,TIGRFAM:TIGR00113,NCBI_GP:EGT80180.1;Name=EGT80180.1;Ontology_term=GO:0008616,GO:0016853,GO:0016740;gbkey=CDS;gene=queA;go_function=isomerase activity|0016853||,transferase activity|0016740||;go_process=queuosine biosynthetic process|0008616||;locus_tag=GGE_1688;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=EGT80180.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 17129 18191 . - . ID=id-GGE_1688;Dbxref=InterPro:IPR003699,TIGRFAM:TIGR00113;Note=quea: s-adenosylmethionine:trna ribosyltrans~queuosine biosynthesis protein~HAMAP:MF_00113~quea~queuosine biosynthesis protein~superfamily:SSF111337~quea-like~queuosine biosynthesis protein;gbkey=misc_feature;gene=queA;locus_tag=GGE_1688 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 17129 18188 . - . ID=id-GGE_1688-2;Note=multi-dom%3B label: queA;gbkey=misc_feature;gene=queA;locus_tag=GGE_1688 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 17129 17798 . - . ID=id-GGE_1688-3;Dbxref=InterPro:IPR003699,PFAM:PF02547;Note=queuosine_synth~queuosine biosynthesis protein;gbkey=misc_feature;gene=queA;locus_tag=GGE_1688 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 17135 18188 . - . ID=id-GGE_1688-4;Note=superfamily%3B label: Queuosine_synth superfamily;gbkey=misc_feature;gene=queA;locus_tag=GGE_1688 GCA_000222085.2|AFQR01000033.1 Genbank gene 18406 18849 . - . ID=gene-GGE_1689;Name=GGE_1689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1689 GCA_000222085.2|AFQR01000033.1 Genbank CDS 18406 18849 . - 0 ID=cds-EGT80181.1;Parent=gene-GGE_1689;Dbxref=NCBI_GP:EGT80181.1;Name=EGT80181.1;Note=HI_0246;gbkey=CDS;locus_tag=GGE_1689;product=putative lipoprotein;protein_id=EGT80181.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 18406 18463 . - . ID=id-GGE_1689;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1689 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 18433 18451 . - . ID=id-GGE_1689-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1689 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 18448 18493 . + . ID=id-AFQR01000033.1:18448..18493;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 18994 19815 . - . ID=gene-GGE_1690;Name=GGE_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1690 GCA_000222085.2|AFQR01000033.1 Genbank CDS 18994 19815 . - 0 ID=cds-EGT80182.1;Parent=gene-GGE_1690;Dbxref=InterPro:IPR005546,PFAM:PF03797,NCBI_GP:EGT80182.1;Name=EGT80182.1;Note=Hypothetical autotransporter beta-domain;gbkey=CDS;locus_tag=GGE_1690;product=putative autotransporter betadomain-containing protein;protein_id=EGT80182.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 19042 19768 . - . ID=id-GGE_1690;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_1690 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 19054 19756 . - . ID=id-GGE_1690-2;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_1690 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 19066 19600 . - . ID=id-GGE_1690-3;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_1690 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 19075 19588 . - . ID=id-GGE_1690-4;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature;locus_tag=GGE_1690 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 19027 19312 . + . ID=id-AFQR01000033.1:19027..19312;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 20295 22556 . - . ID=gene-GGE_1691;Name=GGE_1691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1691 GCA_000222085.2|AFQR01000033.1 Genbank CDS 20295 22556 . - 0 ID=cds-EGT80183.1;Parent=gene-GGE_1691;Dbxref=InterPro:IPR000710,InterPro:IPR004899,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF02395,PFAM:PF03212,NCBI_GP:EGT80183.1;Name=EGT80183.1;Note=Hypothetical phage P22 tailspike;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_1691;product=putative phage P22 tailspike;protein_id=EGT80183.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20295 21435 . - . ID=id-GGE_1691;Note=multi-dom%3B label: Peptidase_S6;gbkey=misc_feature;locus_tag=GGE_1691 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20301 20838 . - . ID=id-GGE_1691-2;Dbxref=InterPro:IPR000710,PFAM:PF02395;Note=peptidase_s6~peptidase s6%2C iga endopeptidase;gbkey=misc_feature;locus_tag=GGE_1691 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20400 21222 . - . ID=id-GGE_1691-3;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_1691 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 21357 21462 . - . ID=id-GGE_1691-4;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_1691 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20337 21564 . + . ID=id-AFQR01000033.1:20337..21564;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20340 21099 . + . ID=id-AFQR01000033.1:20340..21099;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20349 20841 . + . ID=id-AFQR01000033.1:20349..20841;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20355 21270 . + . ID=id-AFQR01000033.1:20355..21270;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20364 20979 . + . ID=id-AFQR01000033.1:20364..20979;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20364 20910 . + . ID=id-AFQR01000033.1:20364..20910;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20457 21891 . + . ID=id-AFQR01000033.1:20457..21891;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20553 22266 . + . ID=id-AFQR01000033.1:20553..22266;Dbxref=InterPro:IPR004899,PFAM:PF03212;Note=pertactin~pertactin%2C central region;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 20850 21966 . + . ID=id-AFQR01000033.1:20850..21966;Note=superfamily%3B label: PL_Passenger_AT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 22587 23660 . - . ID=gene-GGE_1692;Name=GGE_1692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1692 GCA_000222085.2|AFQR01000033.1 Genbank CDS 22587 23660 . - 0 ID=cds-EGT80184.1;Parent=gene-GGE_1692;Dbxref=InterPro:IPR000710,InterPro:IPR018114,PFAM:PF02395,NCBI_GP:EGT80184.1;Name=EGT80184.1;Note=Hypothetical peptidase S1/S6%2C chymotrypsin/Hap-like protein;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_1692;product=putative peptidase S1/S6%2C chymotrypsin/Hap-like protein;protein_id=EGT80184.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22602 22656 . - . ID=id-GGE_1692;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1692 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22641 23508 . - . ID=id-GGE_1692-2;Dbxref=InterPro:IPR000710,PFAM:PF02395;Note=peptidase_s6~peptidase s6%2C iga endopeptidase;gbkey=misc_feature;locus_tag=GGE_1692 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22665 23478 . - . ID=id-GGE_1692-3;Note=multi-dom%3B label: Peptidase_S6;gbkey=misc_feature;locus_tag=GGE_1692 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23485 23660 . - . ID=id-GGE_1692-4;Note=VFDB hit~VFDB:VFG1149;gbkey=misc_feature;locus_tag=GGE_1692 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22623 23301 . + . ID=id-AFQR01000033.1:22623..23301;Dbxref=InterPro:IPR018114;Note=PatternScan:PS00135~trypsin_ser~peptidase s1/s6%2C chymotrypsin/hap%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22644 23313 . + . ID=id-AFQR01000033.1:22644..23313;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22650 23007 . + . ID=id-AFQR01000033.1:22650..23007;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 22650 22686 . + . ID=id-AFQR01000033.1:22650..22686;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23713 23722 . + . ID=id-AFQR01000033.1:23713..23722;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23918 23927 . - . ID=id-AFQR01000033.1:23918..23927;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 23959 26790 . - . ID=gene-GGE_1693;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank CDS 23959 26790 . - 0 ID=cds-EGT80185.1;Parent=gene-GGE_1693;Dbxref=GeneID:1174917,InterPro:IPR003439,InterPro:IPR004602,InterPro:IPR013815,InterPro:IPR017871,PFAM:PF00005,TIGRFAM:TIGR00630,NCBI_GP:EGT80185.1;Name=EGT80185.1;Ontology_term=GO:0006289,GO:0009380,GO:0005524,GO:0016887,GO:0003824,GO:0009381;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||;go_function=ATP binding|0005524||,ATPase activity|0016887||,catalytic activity|0003824||,excinuclease ABC activity|0009381||;go_process=nucleotide-excision repair|0006289||;locus_tag=GGE_1693;product=UvrABC system protein A;protein_id=EGT80185.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23959 26785 . - . ID=id-GGE_1693;Note=multi-dom%3B label: uvrA;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23959 26779 . - . ID=id-GGE_1693-2;Dbxref=InterPro:IPR004602;Note=HAMAP:MF_00205~uvra~excinuclease abc%2C a subunit;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23959 26767 . - . ID=id-GGE_1693-3;Note=HMMPanther:PTHR24220:SF103~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23959 25666 . - . ID=id-GGE_1693-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23968 26728 . - . ID=id-GGE_1693-5;Dbxref=InterPro:IPR004602,TIGRFAM:TIGR00630;Note=uvra: excinuclease abc subunit a~excinuclease abc%2C a subunit;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23971 24298 . - . ID=id-GGE_1693-6;Note=specific~superfamily%3B label: ABC_UvrA_I;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26159 26168 . - . ID=id-GGE_1693-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=uvrA;locus_tag=GGE_1693 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 23986 26674 . + . ID=id-AFQR01000033.1:23986..26674;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24004 26449 . + . ID=id-AFQR01000033.1:24004..26449;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24004 25420 . + . ID=id-AFQR01000033.1:24004..25420;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24007 25594 . + . ID=id-AFQR01000033.1:24007..25594;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24088 24556 . + . ID=id-AFQR01000033.1:24088..24556;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24175 25177 . + . ID=id-AFQR01000033.1:24175..25177;Note=Gene3D:1.20.1580.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24211 25255 . + . ID=id-AFQR01000033.1:24211..25255;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24298 25348 . + . ID=id-AFQR01000033.1:24298..25348;Note=specific~superfamily%3B label: ABC_UvrA_I;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24313 25393 . + . ID=id-AFQR01000033.1:24313..25393;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24316 26422 . + . ID=id-AFQR01000033.1:24316..26422;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24319 24817 . + . ID=id-AFQR01000033.1:24319..24817;Note=Gene3D:1.10.8.280;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24340 26041 . + . ID=id-AFQR01000033.1:24340..26041;Note=Gene3D:1.20.1580.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24604 25900 . + . ID=id-AFQR01000033.1:24604..25900;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24652 25048 . + . ID=id-AFQR01000033.1:24652..25048;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24886 25798 . + . ID=id-AFQR01000033.1:24886..25798;Note=specific~superfamily%3B label: ABC_UvrA_II;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24898 25792 . + . ID=id-AFQR01000033.1:24898..25792;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 24952 25780 . + . ID=id-AFQR01000033.1:24952..25780;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 25451 25460 . + . ID=id-AFQR01000033.1:25451..25460;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26815 26824 . + . ID=id-AFQR01000033.1:26815..26824;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26908 26917 . - . ID=id-AFQR01000033.1:26908..26917;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 26945 27448 . + . ID=gene-GGE_1694;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank CDS 26945 27448 . + 0 ID=cds-EGT80186.1;Parent=gene-GGE_1694;Dbxref=GeneID:1174443,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,TIGRFAM:TIGR00621,NCBI_GP:EGT80186.1;Name=EGT80186.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||;go_process=DNA replication|0006260||;locus_tag=GGE_1694;product=Single-stranded DNA-binding protein;protein_id=EGT80186.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26945 27446 . + . ID=id-GGE_1694;Dbxref=InterPro:IPR011344,InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold~HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26951 27443 . + . ID=id-GGE_1694-2;Dbxref=InterPro:IPR011344,TIGRFAM:TIGR00621;Note=ssb: single-strand binding protein~single-strand dna-binding;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26954 27440 . + . ID=id-GGE_1694-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26957 27263 . + . ID=id-GGE_1694-4;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26957 27260 . + . ID=id-GGE_1694-5;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26966 27251 . + . ID=id-GGE_1694-6;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;gene=ssb;locus_tag=GGE_1694 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 26984 27380 . - . ID=id-AFQR01000033.1:26984..27380;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 27516 29378 . - . ID=gene-GGE_1695;Name=GGE_1695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank CDS 27516 29378 . - 0 ID=cds-EGT80187.1;Parent=gene-GGE_1695;Dbxref=InterPro:IPR003148,InterPro:IPR004771,InterPro:IPR006153,InterPro:IPR016040,PFAM:PF00999,PFAM:PF02254,TIGRFAM:TIGR00932,NCBI_GP:EGT80187.1;Name=EGT80187.1;Note=kefBC;Ontology_term=GO:0006812,GO:0008152,GO:0006813,GO:0055085,GO:0016021,GO:0005488,GO:0003824,GO:0008324,GO:0015299;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=binding|0005488||,catalytic activity|0003824||,cation transmembrane transporter activity|0008324||,solute:hydrogen antiporter activity|0015299||;go_process=cation transport|0006812||,metabolic process|0008152||,potassium ion transport|0006813||,transmembrane transport|0055085||;locus_tag=GGE_1695;product=Glutathione-regulated potassium-efflux system protein;protein_id=EGT80187.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27543 29205 . - . ID=id-GGE_1695;Note=HMMPanther:PTHR16254~family not named;gbkey=misc_feature;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27549 29196 . - . ID=id-GGE_1695-2;Note=multi-dom%3B label: PRK03659;gbkey=misc_feature;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27567 28611 . - . ID=id-GGE_1695-3;Dbxref=InterPro:IPR006153,PFAM:PF00999;Note=na_h_exchanger~cation/h+ exchanger;gbkey=misc_feature;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 28335 . - . ID=id-GGE_1695-4;Dbxref=InterPro:IPR004771,TIGRFAM:TIGR00932;Note=2a37: transporter%2C monovalent cation:proton~k+/h+ exchanger;gbkey=misc_feature;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 28287 . - . ID=id-GGE_1695-5;Note=superfamily%3B label: KefB superfamily;gbkey=misc_feature;locus_tag=GGE_1695 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27549 29346 . + . ID=id-AFQR01000033.1:27549..29346;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27555 28347 . + . ID=id-AFQR01000033.1:27555..28347;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27555 28200 . + . ID=id-AFQR01000033.1:27555..28200;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27561 28092 . + . ID=id-AFQR01000033.1:27561..28092;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27564 27801 . + . ID=id-AFQR01000033.1:27564..27801;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 28614 . + . ID=id-AFQR01000033.1:27576..28614;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 28332 . + . ID=id-AFQR01000033.1:27576..28332;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 27888 . + . ID=id-AFQR01000033.1:27576..27888;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27576 27696 . + . ID=id-AFQR01000033.1:27576..27696;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 28527 . + . ID=id-AFQR01000033.1:27585..28527;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 28416 . + . ID=id-AFQR01000033.1:27585..28416;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 28206 . + . ID=id-AFQR01000033.1:27585..28206;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 28080 . + . ID=id-AFQR01000033.1:27585..28080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 27984 . + . ID=id-AFQR01000033.1:27585..27984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 27792 . + . ID=id-AFQR01000033.1:27585..27792;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27585 27618 . + . ID=id-AFQR01000033.1:27585..27618;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27858 28761 . + . ID=id-AFQR01000033.1:27858..28761;Dbxref=InterPro:IPR003148,PFAM:PF02254;Note=superfamily~trka_n~regulator of k+ conductance%3B label: NADB_Rossmann superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27885 28758 . + . ID=id-AFQR01000033.1:27885..28758;Dbxref=InterPro:IPR003148;Note=ProfileScan:PS51201~rck_n~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27909 28755 . + . ID=id-AFQR01000033.1:27909..28755;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 27939 28743 . + . ID=id-AFQR01000033.1:27939..28743;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29484 29493 . - . ID=id-AFQR01000033.1:29484..29493;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 29501 29953 . + . ID=gene-GGE_1696;Name=GGE_1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank CDS 29501 29953 . + 0 ID=cds-EGT80188.1;Parent=gene-GGE_1696;Dbxref=GeneID:269933420,InterPro:IPR007382,PFAM:PF04284,NCBI_GP:EGT80188.1;Name=EGT80188.1;Note=CGSHiGG_08995;gbkey=CDS;locus_tag=GGE_1696;product=UPF0756 membrane protein;protein_id=EGT80188.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29519 29936 . + . ID=id-GGE_1696;Dbxref=InterPro:IPR007382;Note=HAMAP:MF_01874~upf0756~uncharacterised protein family upf0756%2C transmembrame;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29522 29597 . + . ID=id-GGE_1696-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29522 29546 . + . ID=id-GGE_1696-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29531 29915 . + . ID=id-GGE_1696-4;Dbxref=InterPro:IPR007382,PFAM:PF04284;Note=duf441~uncharacterised protein family upf0756%2C transmembrame;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29567 29846 . + . ID=id-GGE_1696-5;Note=superfamily%3B label: DUF441 superfamily;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29567 29834 . + . ID=id-GGE_1696-6;Dbxref=InterPro:IPR007382;Note=BlastProDom:PD021096~q4qll5_haei8_q4qll5~uncharacterised protein family upf0756%2C transmembrame;gbkey=misc_feature;locus_tag=GGE_1696 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29537 29912 . - . ID=id-AFQR01000033.1:29537..29912;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29543 29840 . - . ID=id-AFQR01000033.1:29543..29840;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29561 29660 . - . ID=id-AFQR01000033.1:29561..29660;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29570 29738 . - . ID=id-AFQR01000033.1:29570..29738;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29597 29849 . - . ID=id-AFQR01000033.1:29597..29849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 29954 30328 . + . ID=gene-GGE_1697;Name=GGE_1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1697 GCA_000222085.2|AFQR01000033.1 Genbank CDS 29954 30328 . + 0 ID=cds-EGT80189.1;Parent=gene-GGE_1697;Dbxref=GeneID:1176086,InterPro:IPR006696,PFAM:PF04241,NCBI_GP:EGT80189.1;Name=EGT80189.1;Note=HI_1073;gbkey=CDS;locus_tag=GGE_1697;product=UPF0382 membrane protein;protein_id=EGT80189.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29954 30323 . + . ID=id-GGE_1697;Note=HMMPanther:PTHR10580~uncharacterized;gbkey=misc_feature;locus_tag=GGE_1697 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29969 30311 . + . ID=id-GGE_1697-2;Note=superfamily%3B label: DUF423 superfamily;gbkey=misc_feature;locus_tag=GGE_1697 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 29969 30023 . + . ID=id-GGE_1697-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1697 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30008 30218 . + . ID=id-GGE_1697-4;Dbxref=InterPro:IPR006696,PFAM:PF04241;Note=duf423~protein of unknown function duf423;gbkey=misc_feature;locus_tag=GGE_1697 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30014 30080 . - . ID=id-AFQR01000033.1:30014..30080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30023 30239 . - . ID=id-AFQR01000033.1:30023..30239;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30023 30158 . - . ID=id-AFQR01000033.1:30023..30158;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 30325 34236 . + . ID=gene-GGE_1698;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank CDS 30325 34236 . + 0 ID=cds-EGT80190.1;Parent=gene-GGE_1698;Dbxref=GeneID:3183525,InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR003148,InterPro:IPR003321,InterPro:IPR004664,InterPro:IPR004771,InterPro:IPR006153,InterPro:IPR007502,InterPro:IPR008571,InterPro:IPR009056,InterPro:IPR009898,InterPro:IPR010222,InterPro:IPR010653,InterPro:IPR011031,InterPro:IPR011545,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR016040,InterPro:IPR017039,InterPro:IPR017570,PFAM:PF00270,PFAM:PF00271,PFAM:PF00999,PFAM:PF02254,PFAM:PF02335,PFAM:PF03631,PFAM:PF04408,PFAM:PF05872,PFAM:PF06804,PFAM:PF07274,PFAM:PF07717,PFAM:PF11898,PIR:PIRSF000243,PIR:PIRSF035875,TIGRFAM:TIGR00765,TIGRFAM:TIGR00932,TIGRFAM:TIGR01967,TIGRFAM:TIGR03152,NCBI_GP:EGT80190.1;Name=EGT80190.1;Ontology_term=GO:0006812,GO:0008152,GO:0006807,GO:0055114,GO:0006813,GO:0055085,GO:0016021,GO:0042597,GO:0005524,GO:0008026,GO:0005488,GO:0005509,GO:0003824,GO:0008324,GO:0009055,GO:0004386,GO:0020037,GO:0005506,GO:0042279,GO:0003676,GO:0004540,GO:0015299;gbkey=CDS;gene=hrpA;go_component=integral to membrane|0016021||,periplasmic space|0042597||;go_function=ATP binding|0005524||,ATP-dependent helicase activity|0008026||,binding|0005488||,calcium ion binding|0005509||,catalytic activity|0003824||,cation transmembrane transporter activity|0008324||,electron carrier activity|0009055||,helicase activity|0004386||,heme binding|0020037||,iron ion binding|0005506||,nitrite reductase (cytochrome ammonia-forming) activity|0042279||,nucleic acid binding|0003676||,ribonuclease activity|0004540||,solute:hydrogen antiporter activity|0015299||;go_process=cation transport|0006812||,metabolic process|0008152||,nitrogen compound metabolic process|0006807||,oxidation-reduction process|0055114||,potassium ion transport|0006813||,transmembrane transport|0055085||;locus_tag=GGE_1698;product=ATP-dependent RNA helicase hrpA;protein_id=EGT80190.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30355 30361 . + . ID=id-GGE_1698;Note=seg;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30376 34183 . + . ID=id-GGE_1698-2;Dbxref=InterPro:IPR010222,TIGRFAM:TIGR01967;Note=deah_box_hrpa: atp-dependent helicase h~rna helicase%2C atp-dependent deah box%2C hrpa type;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30391 34162 . + . ID=id-GGE_1698-3;Note=multi-dom%3B label: PRK11131;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30532 30541 . + . ID=id-GGE_1698-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30565 32125 . + . ID=id-GGE_1698-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30568 32197 . + . ID=id-GGE_1698-6;Note=HMMPanther:PTHR18934~family not named;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30595 30781 . + . ID=id-GGE_1698-7;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30604 30817 . + . ID=id-GGE_1698-8;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30607 30763 . + . ID=id-GGE_1698-9;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30625 30742 . + . ID=id-GGE_1698-10;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature;gene=hrpA;locus_tag=GGE_1698 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30355 30919 . - . ID=id-AFQR01000033.1:30355..30919;Dbxref=InterPro:IPR002464;Note=PatternScan:PS00690~deah_atp_helicase~dna/rna helicase%2C atp-dependent%2C deah-box type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30361 30775 . - . ID=id-AFQR01000033.1:30361..30775;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30364 30736 . - . ID=id-AFQR01000033.1:30364..30736;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30370 31105 . - . ID=id-AFQR01000033.1:30370..31105;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30385 30460 . - . ID=id-AFQR01000033.1:30385..30460;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30391 32626 . - . ID=id-AFQR01000033.1:30391..32626;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30391 31138 . - . ID=id-AFQR01000033.1:30391..31138;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30592 31279 . - . ID=id-AFQR01000033.1:30592..31279;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30616 31729 . - . ID=id-AFQR01000033.1:30616..31729;Dbxref=InterPro:IPR007502,PFAM:PF04408;Note=ha2~helicase-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30619 31726 . - . ID=id-AFQR01000033.1:30619..31726;Note=superfamily%3B label: HA2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30625 32140 . - . ID=id-AFQR01000033.1:30625..32140;Dbxref=InterPro:IPR011709,PFAM:PF07717;Note=superfamily~duf1605~domain of unknown function duf1605%3B label: DUF1605 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30739 31156 . - . ID=id-AFQR01000033.1:30739..31156;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30784 31132 . - . ID=id-AFQR01000033.1:30784..31132;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 30829 31165 . - . ID=id-AFQR01000033.1:30829..31165;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 32080 32473 . - . ID=id-AFQR01000033.1:32080..32473;Dbxref=PFAM:PF11898;Note=superfamily~duf3418%3B label: DUF3418 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 32208 32217 . - . ID=id-AFQR01000033.1:32208..32217;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 34255 35022 . + . ID=gene-GGE_1699;Name=GGE_1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1699 GCA_000222085.2|AFQR01000033.1 Genbank CDS 34255 35022 . + 0 ID=cds-EGT80191.1;Parent=gene-GGE_1699;Dbxref=GeneID:215487955,NCBI_GP:EGT80191.1;Name=EGT80191.1;Note=YP_002330386~E2348C_2894;gbkey=CDS;locus_tag=GGE_1699;product=Hypothetical protein;protein_id=EGT80191.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank gene 35622 37148 . + . ID=gene-GGE_1700;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank CDS 35622 37148 . + 0 ID=cds-EGT80192.1;Parent=gene-GGE_1700;Dbxref=GeneID:81335944,InterPro:IPR003321,InterPro:IPR009056,InterPro:IPR011031,InterPro:IPR017570,PFAM:PF02335,PIR:PIRSF000243,TIGRFAM:TIGR03152,NCBI_GP:EGT80192.1;Name=EGT80192.1;Ontology_term=GO:0006807,GO:0055114,GO:0042597,GO:0005509,GO:0009055,GO:0020037,GO:0005506,GO:0042279;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||;go_function=calcium ion binding|0005509||,electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||,nitrite reductase (cytochrome ammonia-forming) activity|0042279||;go_process=nitrogen compound metabolic process|0006807||,oxidation-reduction process|0055114||;locus_tag=GGE_1700;product=Cytochrome c-552;protein_id=EGT80192.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35631 37131 . + . ID=id-GGE_1700;Dbxref=InterPro:IPR003321,PIR:PIRSF000243;Note=cytochrome c-552 precursor (cytochrome c nitrite reductase)~cytochrome c552;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35634 37119 . + . ID=id-GGE_1700-2;Dbxref=InterPro:IPR017570;Note=HAMAP:MF_01182~cytochrom_c552~formate-dependent cytochrome c nitrite reductase%2C c552 subunit;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35643 35679 . + . ID=id-GGE_1700-3;Note=seg;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35712 37047 . + . ID=id-GGE_1700-4;Note=multi-dom%3B label: NrfA;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35733 37017 . + . ID=id-GGE_1700-5;Note=superfamily%3B label: nrfA superfamily;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35742 37008 . + . ID=id-GGE_1700-6;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35757 36993 . + . ID=id-GGE_1700-7;Dbxref=InterPro:IPR017570,TIGRFAM:TIGR03152;Note=cyto_c552_hcooh: formate-dependent cy~formate-dependent cytochrome c nitrite reductase%2C c552 subunit;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35772 36966 . + . ID=id-GGE_1700-8;Dbxref=InterPro:IPR003321,PFAM:PF02335;Note=cytochrom_c552~cytochrome c552;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 36114 36177 . + . ID=id-GGE_1700-9;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature;gene=nrfA;locus_tag=GGE_1700 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35973 36087 . - . ID=id-AFQR01000033.1:35973..36087;Dbxref=InterPro:IPR009056;Note=ProfileScan:PS51007~cytc~cytochrome c domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35976 36315 . - . ID=id-AFQR01000033.1:35976..36315;Note=Gene3D:1.10.780.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 35985 36600 . - . ID=id-AFQR01000033.1:35985..36600;Dbxref=InterPro:IPR009056;Note=ProfileScan:PS51007~cytc~cytochrome c domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37159 37168 . - . ID=id-AFQR01000033.1:37159..37168;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37183 37192 . + . ID=id-AFQR01000033.1:37183..37192;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 37225 37875 . + . ID=gene-GGE_1701;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank CDS 37225 37875 . + 0 ID=cds-EGT80193.1;Parent=gene-GGE_1701;Dbxref=GeneID:1171765,InterPro:IPR011031,InterPro:IPR017564,TIGRFAM:TIGR03146,NCBI_GP:EGT80193.1;Name=EGT80193.1;Ontology_term=GO:0006807,GO:0042597,GO:0020037;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||;go_function=heme binding|0020037||;go_process=nitrogen compound metabolic process|0006807||;locus_tag=GGE_1701;product=Cytochrome c-type protein NrfB;protein_id=EGT80193.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37234 37855 . + . ID=id-GGE_1701;Note=multi-dom%3B label: PRK11659;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37252 37258 . + . ID=id-GGE_1701-2;Note=seg;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37270 37795 . + . ID=id-GGE_1701-3;Note=Gene3D:1.10.780.10;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37351 37702 . + . ID=id-GGE_1701-4;Dbxref=InterPro:IPR017564,TIGRFAM:TIGR03146;Note=cyt_nit_nrfb: cytochrome c nitrite reduc~cytochrome c nitrite reductase%2C pentahaem subunit;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37363 37681 . + . ID=id-GGE_1701-5;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37375 37681 . + . ID=id-GGE_1701-6;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature;gene=nrfB;locus_tag=GGE_1701 GCA_000222085.2|AFQR01000033.1 Genbank gene 37872 38549 . + . ID=gene-GGE_1702;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=GGE_1702 GCA_000222085.2|AFQR01000033.1 Genbank CDS 37872 38549 . + 0 ID=cds-EGT80194.1;Parent=gene-GGE_1702;Dbxref=GeneID:1171766,InterPro:IPR017567,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR03149,NCBI_GP:EGT80194.1;Name=EGT80194.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;gene=nrfC;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1702;product=Protein nrfC;protein_id=EGT80194.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37881 38541 . + . ID=id-GGE_1702;Dbxref=InterPro:IPR017567,TIGRFAM:TIGR03149;Note=multi-dom~cyt_nit_nrfc: cytochrome c nitrite reduc~cytochrome c nitrite reductase%2C fe-s protein%3B label: cyt_nit_nrfC;gbkey=misc_feature;gene=nrfC;locus_tag=GGE_1702 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37971 38427 . + . ID=id-GGE_1702-2;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=nrfC;locus_tag=GGE_1702 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37986 38427 . + . ID=id-GGE_1702-3;Note=HMMPanther:PTHR11938:SF53~subfamily not named~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;gene=nrfC;locus_tag=GGE_1702 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37908 38253 . - . ID=id-AFQR01000033.1:37908..38253;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37959 37989 . - . ID=id-AFQR01000033.1:37959..37989;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37962 38226 . - . ID=id-AFQR01000033.1:37962..38226;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 37968 38127 . - . ID=id-AFQR01000033.1:37968..38127;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38028 38178 . - . ID=id-AFQR01000033.1:38028..38178;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38061 38334 . - . ID=id-AFQR01000033.1:38061..38334;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 38546 39511 . + . ID=gene-GGE_1703;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=GGE_1703 GCA_000222085.2|AFQR01000033.1 Genbank CDS 38546 39511 . + 0 ID=cds-EGT80195.1;Parent=gene-GGE_1703;Dbxref=GeneID:1171767,InterPro:IPR005614,InterPro:IPR017566,PFAM:PF03916,TIGRFAM:TIGR03148,NCBI_GP:EGT80195.1;Name=EGT80195.1;gbkey=CDS;gene=nrfD;locus_tag=GGE_1703;product=Protein nrfD;protein_id=EGT80195.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38564 39494 . + . ID=id-GGE_1703;Note=multi-dom%3B label: NrfD;gbkey=misc_feature;gene=nrfD;locus_tag=GGE_1703 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38567 39491 . + . ID=id-GGE_1703-2;Dbxref=InterPro:IPR005614,InterPro:IPR017566,PFAM:PF03916,TIGRFAM:TIGR03148;Note=superfamily~cyt_nit_nrfd: cytochrome c nitrite reduc~cytochrome c nitrite reductase%2C nrfd subunit~nrfd~polysulphide reductase%2C nrfd%3B label: COG5557 superfamily;gbkey=misc_feature;gene=nrfD;locus_tag=GGE_1703 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38606 38609 . + . ID=id-GGE_1703-3;Note=transmembrane_regions;gbkey=misc_feature;gene=nrfD;locus_tag=GGE_1703 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38588 38996 . - . ID=id-AFQR01000033.1:38588..38996;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 39422 . - . ID=id-AFQR01000033.1:38615..39422;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 39329 . - . ID=id-AFQR01000033.1:38615..39329;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 39218 . - . ID=id-AFQR01000033.1:38615..39218;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 39101 . - . ID=id-AFQR01000033.1:38615..39101;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 39005 . - . ID=id-AFQR01000033.1:38615..39005;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 38831 . - . ID=id-AFQR01000033.1:38615..38831;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 38615 38705 . - . ID=id-AFQR01000033.1:38615..38705;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39568 39804 . + . ID=id-GeneID:43580;Dbxref=GeneID:43580,GeneID:43581,GeneID:43582,GeneID:43586;Note=ISDB hit~ISDB hit~ISDB hit~ISDB hit~VFDB hit~VFDB:VFG0707~VFDB hit~VFDB:VFG0695~VFDB hit~VFDB:VFG0683;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39569 39804 . + . ID=id-GeneID:43592;Dbxref=GeneID:43592;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39573 39804 . + . ID=id-GeneID:43583;Dbxref=GeneID:43583;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39574 39804 . + . ID=id-GeneID:13027665;Dbxref=GeneID:13027665;Note=ISDB hit~VFDB hit~VFDB:VFG0684;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39799 40054 . + . ID=id-GeneID:43580-2;Dbxref=GeneID:43580;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39799 40053 . + . ID=id-GeneID:43581;Dbxref=GeneID:43581,GeneID:43582,GeneID:43592;Note=ISDB hit~ISDB hit~ISDB hit~VFDB hit~VFDB:VFG0707~VFDB hit~VFDB:VFG0695;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 39799 40012 . + . ID=id-GeneID:43583-2;Dbxref=GeneID:43583;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 40287 41111 . + . ID=gene-GGE_1704;Name=GGE_1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank CDS 40287 41111 . + 0 ID=cds-EGT80196.1;Parent=gene-GGE_1704;Dbxref=GeneID:1175387,InterPro:IPR000583,InterPro:IPR005854,InterPro:IPR017932,PFAM:PF00310,NCBI_GP:EGT80196.1;Name=EGT80196.1;Note=HI_1037;Ontology_term=GO:0008152,GO:0009113,GO:0004044;gbkey=CDS;go_function=amidophosphoribosyltransferase activity|0004044||;go_process=metabolic process|0008152||,purine base biosynthetic process|0009113||;locus_tag=GGE_1704;product=Putative glutamine amidotransferase;protein_id=EGT80196.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40287 41040 . + . ID=id-GGE_1704;Note=Gene3D:3.60.20.10;gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40287 41037 . + . ID=id-GGE_1704-2;Note=specific~superfamily%3B label: Gn_AT_II superfamily;gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40293 41106 . + . ID=id-GGE_1704-3;Dbxref=InterPro:IPR017932;Note=ProfileScan:PS51278~gatase_type_2~glutamine amidotransferase%2C type ii;gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40293 41049 . + . ID=id-GGE_1704-4;Note=superfamily:SSF56235~n-terminal nucleophile aminohydrolase (ntn hydrolase);gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40482 40698 . + . ID=id-GGE_1704-5;Dbxref=InterPro:IPR000583,PFAM:PF00310;Note=gatase_2~glutamine amidotransferase%2C class-ii;gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 40482 40488 . + . ID=id-GGE_1704-6;Dbxref=InterPro:IPR005854;Note=HMMPanther:PTHR11907~family not named~amidophosphoribosyl transferase;gbkey=misc_feature;locus_tag=GGE_1704 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41128 41137 . + . ID=id-AFQR01000033.1:41128..41137;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41156 41165 . - . ID=id-AFQR01000033.1:41156..41165;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 41169 41942 . - . ID=gene-GGE_1705;Name=GGE_1705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1705 GCA_000222085.2|AFQR01000033.1 Genbank CDS 41169 41942 . - 0 ID=cds-EGT80197.1;Parent=gene-GGE_1705;Dbxref=GeneID:148827394,InterPro:IPR003538,InterPro:IPR006260,InterPro:IPR014161,PFAM:PF03544,TIGRFAM:TIGR01352,TIGRFAM:TIGR02794,NCBI_GP:EGT80197.1;Name=EGT80197.1;Note=YP_001292147;Ontology_term=GO:0006826,GO:0015031,GO:0006810,GO:0016020,GO:0030288,GO:0005381,GO:0008565,GO:0005215;gbkey=CDS;go_component=membrane|0016020||,outer membrane-bounded periplasmic space|0030288||;go_function=iron ion transmembrane transporter activity|0005381||,protein transporter activity|0008565||,transporter activity|0005215||;go_process=iron ion transport|0006826||,protein transport|0015031||,transport|0006810||;locus_tag=GGE_1705;product=TonB;protein_id=EGT80197.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41190 41238 . - . ID=id-GGE_1705;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1705 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41193 41916 . - . ID=id-GGE_1705-2;Dbxref=InterPro:IPR014161,TIGRFAM:TIGR02794;Note=tola_full: protein tola~tol-pal system%2C tola;gbkey=misc_feature;locus_tag=GGE_1705 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41466 41646 . - . ID=id-GGE_1705-3;Note=superfamily:SSF74653~tola/tonb c-terminal domain;gbkey=misc_feature;locus_tag=GGE_1705 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41202 41463 . + . ID=id-AFQR01000033.1:41202..41463;Dbxref=InterPro:IPR003538;Note=FPrintScan:PR01374~tonbprotein~gram-negative bacterial tonb protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41226 41760 . + . ID=id-AFQR01000033.1:41226..41760;Dbxref=InterPro:IPR003538;Note=FPrintScan:PR01374~tonbprotein~gram-negative bacterial tonb protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41232 41355 . + . ID=id-AFQR01000033.1:41232..41355;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41235 41697 . + . ID=id-AFQR01000033.1:41235..41697;Dbxref=InterPro:IPR003538;Note=FPrintScan:PR01374~tonbprotein~gram-negative bacterial tonb protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41289 41421 . + . ID=id-AFQR01000033.1:41289..41421;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41397 41715 . + . ID=id-AFQR01000033.1:41397..41715;Dbxref=InterPro:IPR006260,TIGRFAM:TIGR01352;Note=tonb_cterm: tonb family c-terminal domain~tonb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41397 41712 . + . ID=id-AFQR01000033.1:41397..41712;Dbxref=InterPro:IPR006260,PFAM:PF03544;Note=tonb~tonb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41400 41709 . + . ID=id-AFQR01000033.1:41400..41709;Note=superfamily%3B label: TonB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 41952 42395 . - . ID=gene-GGE_1706;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=GGE_1706 GCA_000222085.2|AFQR01000033.1 Genbank CDS 41952 42395 . - 0 ID=cds-EGT80198.1;Parent=gene-GGE_1706;Dbxref=GeneID:1169577,InterPro:IPR003400,InterPro:IPR014171,PFAM:PF02472,TIGRFAM:TIGR02804,NCBI_GP:EGT80198.1;Name=EGT80198.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=exbD;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1706;product=Biopolymer transport protein exbD;protein_id=EGT80198.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41964 42315 . - . ID=id-GGE_1706;Dbxref=InterPro:IPR014171,TIGRFAM:TIGR02804;Note=superfamily~exbd_2: tonb system transport protein exbd~tonb system transport protein exbd type-2%3B label: ExbD superfamily;gbkey=misc_feature;gene=exbD;locus_tag=GGE_1706 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41967 42309 . - . ID=id-GGE_1706-2;Dbxref=InterPro:IPR003400,PFAM:PF02472;Note=exbd~biopolymer transport protein exbd/tolr;gbkey=misc_feature;gene=exbD;locus_tag=GGE_1706 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 41973 42021 . - . ID=id-GGE_1706-3;Note=transmembrane_regions;gbkey=misc_feature;gene=exbD;locus_tag=GGE_1706 GCA_000222085.2|AFQR01000033.1 Genbank gene 42399 42851 . - . ID=gene-GGE_1707;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=GGE_1707 GCA_000222085.2|AFQR01000033.1 Genbank CDS 42399 42851 . - 0 ID=cds-EGT80199.1;Parent=gene-GGE_1707;Dbxref=GeneID:1169576,InterPro:IPR002898,InterPro:IPR014172,PFAM:PF01618,TIGRFAM:TIGR02805,NCBI_GP:EGT80199.1;Name=EGT80199.1;Ontology_term=GO:0006810,GO:0016020,GO:0008565;gbkey=CDS;gene=exbB;go_component=membrane|0016020||;go_function=protein transporter activity|0008565||;go_process=transport|0006810||;locus_tag=GGE_1707;product=Biopolymer transport protein exbB;protein_id=EGT80199.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42417 42816 . - . ID=id-GGE_1707;Dbxref=InterPro:IPR014172,TIGRFAM:TIGR02805;Note=superfamily~exbb2: tonb-system energizer exbb~tonb-system energizer exbb type-2%3B label: MotA_ExbB superfamily;gbkey=misc_feature;gene=exbB;locus_tag=GGE_1707 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42426 42804 . - . ID=id-GGE_1707-2;Dbxref=InterPro:IPR002898,PFAM:PF01618;Note=mota_exbb~mota/tolq/exbb proton channel;gbkey=misc_feature;gene=exbB;locus_tag=GGE_1707 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42444 42468 . - . ID=id-GGE_1707-3;Note=transmembrane_regions;gbkey=misc_feature;gene=exbB;locus_tag=GGE_1707 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42447 42450 . - . ID=id-GGE_1707-4;Note=seg;gbkey=misc_feature;gene=exbB;locus_tag=GGE_1707 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42438 42618 . + . ID=id-AFQR01000033.1:42438..42618;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42468 42720 . + . ID=id-AFQR01000033.1:42468..42720;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42468 42594 . + . ID=id-AFQR01000033.1:42468..42594;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42978 42987 . - . ID=id-AFQR01000033.1:42978..42987;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 42995 43004 . + . ID=id-AFQR01000033.1:42995..43004;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 43019 43486 . - . ID=gene-GGE_1708;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank CDS 43019 43486 . - 0 ID=cds-EGT80200.1;Parent=gene-GGE_1708;Dbxref=InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,PFAM:PF00578,NCBI_GP:EGT80200.1;Name=EGT80200.1;Ontology_term=GO:0045454,GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||,oxidoreductase activity|0016491||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_1708;product=Putative peroxiredoxin bcp;protein_id=EGT80200.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43019 43484 . - . ID=id-GGE_1708;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43019 43454 . - . ID=id-GGE_1708-2;Note=HMMPanther:PTHR10681:SF5~bacterioferritin comigratory protein~HMMPanther:PTHR10681~thioredoxin peroxidase;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43025 43481 . - . ID=id-GGE_1708-3;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43031 43475 . - . ID=id-GGE_1708-4;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43037 43406 . - . ID=id-GGE_1708-5;Dbxref=InterPro:IPR000866,PFAM:PF00578;Note=ahpc-tsa~alkyl hydroperoxide reductase subunit c/ thiol specific antioxidant;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43046 43433 . - . ID=id-GGE_1708-6;Note=specific~superfamily%3B label: PRX_BCP;gbkey=misc_feature;gene=bcp;locus_tag=GGE_1708 GCA_000222085.2|AFQR01000033.1 Genbank gene 43588 44484 . + . ID=gene-GGE_1709;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank CDS 43588 44484 . + 0 ID=cds-EGT80201.1;Parent=gene-GGE_1709;Dbxref=InterPro:IPR002220,InterPro:IPR005263,InterPro:IPR013785,InterPro:IPR020624,InterPro:IPR020625,PFAM:PF00701,TIGRFAM:TIGR00674,NCBI_GP:EGT80201.1;Name=EGT80201.1;Ontology_term=GO:0019877,GO:0008152,GO:0003824,GO:0008840,GO:0016829;gbkey=CDS;gene=dapA;go_function=catalytic activity|0003824||,dihydrodipicolinate synthase activity|0008840||,lyase activity|0016829||;go_process=diaminopimelate biosynthetic process|0019877||,metabolic process|0008152||;locus_tag=GGE_1709;product=Dihydrodipicolinate synthase;protein_id=EGT80201.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43588 44482 . + . ID=id-GGE_1709;Dbxref=InterPro:IPR002220;Note=HMMPanther:PTHR12128:SF10~subfamily not named~HMMPanther:PTHR12128~family not named~dihydrodipicolinate synthetase;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43606 44467 . + . ID=id-GGE_1709-2;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43609 44464 . + . ID=id-GGE_1709-3;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43612 44461 . + . ID=id-GGE_1709-4;Note=HAMAP:MF_00418~dapa;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43612 44452 . + . ID=id-GGE_1709-5;Dbxref=InterPro:IPR002220,PFAM:PF00701;Note=dhdps~dihydrodipicolinate synthetase;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43612 44443 . + . ID=id-GGE_1709-6;Note=specific~superfamily%3B label: DHDPS;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43618 44446 . + . ID=id-GGE_1709-7;Dbxref=InterPro:IPR005263,TIGRFAM:TIGR00674;Note=multi-dom~dapa: dihydrodipicolinate synthase~dihydrodipicolinate synthase subfamily%3B label: dapA;gbkey=misc_feature;gene=dapA;locus_tag=GGE_1709 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43639 43915 . - . ID=id-AFQR01000033.1:43639..43915;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43642 43990 . - . ID=id-AFQR01000033.1:43642..43990;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43642 43720 . - . ID=id-AFQR01000033.1:43642..43720;Dbxref=InterPro:IPR020624;Note=PatternScan:PS00665~dhdps_1~dihydrodipicolinate synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43645 43819 . - . ID=id-AFQR01000033.1:43645..43819;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43654 43711 . - . ID=id-AFQR01000033.1:43654..43711;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 43681 44005 . - . ID=id-AFQR01000033.1:43681..44005;Dbxref=InterPro:IPR020625;Note=PatternScan:PS00666~dhdps_2~dihydrodipicolinate synthetase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 44583 45587 . + . ID=gene-GGE_1710;Name=GGE_1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1710 GCA_000222085.2|AFQR01000033.1 Genbank CDS 44583 45587 . + 0 ID=cds-EGT80202.1;Parent=gene-GGE_1710;Dbxref=GeneID:301155541,InterPro:IPR010653,PFAM:PF06804,NCBI_GP:EGT80202.1;Name=EGT80202.1;Note=CBW15009;gbkey=CDS;locus_tag=GGE_1710;product=Hypothetical protein;protein_id=EGT80202.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 44583 45582 . + . ID=id-GGE_1710;Note=multi-dom%3B label: NlpB;gbkey=misc_feature;locus_tag=GGE_1710 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 44583 44634 . + . ID=id-GGE_1710-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1710 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 44673 45495 . + . ID=id-GGE_1710-3;Note=superfamily%3B label: Lipoprotein_18 superfamily;gbkey=misc_feature;locus_tag=GGE_1710 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 44697 45468 . + . ID=id-GGE_1710-4;Dbxref=InterPro:IPR010653,PFAM:PF06804;Note=lipoprotein_18~lipoprotein%2C nlpb;gbkey=misc_feature;locus_tag=GGE_1710 GCA_000222085.2|AFQR01000033.1 Genbank gene 45620 46669 . - . ID=gene-GGE_1711;Name=opsX;gbkey=Gene;gene=opsX;gene_biotype=protein_coding;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank CDS 45620 46669 . - 0 ID=cds-EGT80203.1;Parent=gene-GGE_1711;Dbxref=GeneID:18202569,InterPro:IPR002201,PFAM:PF01075,NCBI_GP:EGT80203.1;Name=EGT80203.1;Note=HI_0261;Ontology_term=GO:0008152,GO:0016740;gbkey=CDS;gene=opsX;go_function=transferase activity|0016740||;go_process=metabolic process|0008152||;locus_tag=GGE_1711;product=Putative glycosyltransferase;protein_id=EGT80203.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45653 46628 . - . ID=id-GGE_1711;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45656 45899 . - . ID=id-GGE_1711-2;Note=superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45662 46049 . - . ID=id-GGE_1711-3;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45848 46358 . - . ID=id-GGE_1711-4;Dbxref=InterPro:IPR002201,PFAM:PF01075;Note=glyco_transf_9~glycosyl transferase%2C family 9;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45878 46331 . - . ID=id-GGE_1711-5;Note=multi-dom%3B label: Glyco_transf_9;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46112 46169 . - . ID=id-GGE_1711-6;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=opsX;locus_tag=GGE_1711 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45659 45935 . + . ID=id-AFQR01000033.1:45659..45935;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45674 45824 . + . ID=id-AFQR01000033.1:45674..45824;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 45966 45975 . + . ID=id-AFQR01000033.1:45966..45975;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46121 46157 . + . ID=id-AFQR01000033.1:46121..46157;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 46740 47465 . + . ID=gene-GGE_1712;Name=kdkA;gbkey=Gene;gene=kdkA;gene_biotype=protein_coding;locus_tag=GGE_1712 GCA_000222085.2|AFQR01000033.1 Genbank CDS 46740 47465 . + 0 ID=cds-EGT80204.1;Parent=gene-GGE_1712;Dbxref=GeneID:6831714,InterPro:IPR010440,InterPro:IPR011009,InterPro:IPR022826,PFAM:PF06293,NCBI_GP:EGT80204.1;Name=EGT80204.1;Ontology_term=GO:0009103,GO:0016020,GO:0005524,GO:0016773;gbkey=CDS;gene=kdkA;go_component=membrane|0016020||;go_function=ATP binding|0005524||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_1712;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=EGT80204.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46740 47463 . + . ID=id-GGE_1712;Dbxref=InterPro:IPR022826;Note=HAMAP:MF_00521~kdo_kinase~3-deoxy-d-manno-octulosonic acid kinase;gbkey=misc_feature;gene=kdkA;locus_tag=GGE_1712 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46827 47373 . + . ID=id-GGE_1712-2;Dbxref=InterPro:IPR010440,PFAM:PF06293;Note=kdo~lipopolysaccharide kinase;gbkey=misc_feature;gene=kdkA;locus_tag=GGE_1712 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46968 47094 . + . ID=id-GGE_1712-3;Note=superfamily%3B label: PKc_like superfamily;gbkey=misc_feature;gene=kdkA;locus_tag=GGE_1712 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47016 47058 . + . ID=id-GGE_1712-4;Dbxref=InterPro:IPR011009;Note=superfamily:SSF56112~protein kinase-like (pk-like)~protein kinase-like domain;gbkey=misc_feature;gene=kdkA;locus_tag=GGE_1712 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46779 47145 . - . ID=id-AFQR01000033.1:46779..47145;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46779 46794 . - . ID=id-AFQR01000033.1:46779..46794;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 46869 47193 . - . ID=id-AFQR01000033.1:46869..47193;Note=HMMPanther:PTHR23257:SF352~predicted protein (fragment)~HMMPanther:PTHR23257~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47070 47130 . - . ID=id-AFQR01000033.1:47070..47130;Note=Gene3D:3.90.1200.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47153 47162 . - . ID=id-AFQR01000033.1:47153..47162;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 47477 48064 . + . ID=gene-GGE_1713;Name=GGE_1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank CDS 47477 48064 . + 0 ID=cds-EGT80205.1;Parent=gene-GGE_1713;Dbxref=GeneID:1723867,InterPro:IPR002637,InterPro:IPR020922,PFAM:PF01725,TIGRFAM:TIGR00042,NCBI_GP:EGT80205.1;Name=EGT80205.1;Note=HI_0260;Ontology_term=GO:0016787,GO:0017111;gbkey=CDS;go_function=hydrolase activity|0016787||,nucleoside-triphosphatase activity|0017111||;locus_tag=GGE_1713;product=Nucleoside-triphosphatase;protein_id=EGT80205.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47477 48062 . + . ID=id-GGE_1713;Dbxref=InterPro:IPR002637;Note=Gene3D:3.90.950.10~HMMPanther:PTHR11067:SF1~ham1 protein-related~HMMPanther:PTHR11067~family not named~ham1-like protein;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47483 48059 . + . ID=id-GGE_1713-2;Note=superfamily:SSF52972~itpase-like;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47489 48053 . + . ID=id-GGE_1713-3;Dbxref=InterPro:IPR002637,TIGRFAM:TIGR00042;Note=tigr00042: non-canonical purine ntp pyropho~ham1-like protein;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47489 48047 . + . ID=id-GGE_1713-4;Dbxref=InterPro:IPR020922;Note=HAMAP:MF_01405~nucleoside_triphosp~nucleoside-triphosphatase;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47492 48050 . + . ID=id-GGE_1713-5;Dbxref=InterPro:IPR002637,PFAM:PF01725;Note=ham1p_like~ham1-like protein;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 47492 48044 . + . ID=id-GGE_1713-6;Note=specific~superfamily%3B label: HAM1;gbkey=misc_feature;locus_tag=GGE_1713 GCA_000222085.2|AFQR01000033.1 Genbank gene 48156 50000 . - . ID=gene-GGE_1714;Name=GGE_1714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank CDS 48156 50000 . - 0 ID=cds-EGT80206.1;Parent=gene-GGE_1714;Dbxref=GeneID:2492568,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,NCBI_GP:EGT80206.1;Name=EGT80206.1;Note=HI_1051;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1714;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT80206.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48207 49683 . - . ID=id-GGE_1714;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48240 49887 . - . ID=id-GGE_1714-2;Note=HMMPanther:PTHR24221:SF91~subfamily not named~HMMPanther:PTHR24221~family not named;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48240 49080 . - . ID=id-GGE_1714-3;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48288 48996 . - . ID=id-GGE_1714-4;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48288 48945 . - . ID=id-GGE_1714-5;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=abc_membrane~abc transporter%2C transmembrane domain;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48324 49812 . - . ID=id-GGE_1714-6;Note=multi-dom%3B label: MdlB;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48342 48855 . - . ID=id-GGE_1714-7;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_1714 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48192 48741 . + . ID=id-AFQR01000033.1:48192..48741;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48192 48288 . + . ID=id-AFQR01000033.1:48192..48288;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48201 49674 . + . ID=id-AFQR01000033.1:48201..49674;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48216 48981 . + . ID=id-AFQR01000033.1:48216..48981;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48216 48408 . + . ID=id-AFQR01000033.1:48216..48408;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48225 48711 . + . ID=id-AFQR01000033.1:48225..48711;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48225 48633 . + . ID=id-AFQR01000033.1:48225..48633;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48225 48282 . + . ID=id-AFQR01000033.1:48225..48282;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48549 49368 . + . ID=id-AFQR01000033.1:48549..49368;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48861 49248 . + . ID=id-AFQR01000033.1:48861..49248;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48870 49248 . + . ID=id-AFQR01000033.1:48870..49248;Note=specific~superfamily%3B label: ABCC_MsbA;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48876 49248 . + . ID=id-AFQR01000033.1:48876..49248;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 48897 49185 . + . ID=id-AFQR01000033.1:48897..49185;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 50079 50975 . - . ID=gene-GGE_1715;Name=GGE_1715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1715 GCA_000222085.2|AFQR01000033.1 Genbank CDS 50079 50975 . - 0 ID=cds-EGT80207.1;Parent=gene-GGE_1715;Dbxref=InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014710,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,PFAM:PF00165,PFAM:PF02311,NCBI_GP:EGT80207.1;Name=EGT80207.1;Note=HI_1052;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0003677,GO:0005515,GO:0043565,GO:0003700;gbkey=CDS;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,protein binding|0005515||,sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_1715;product=putative transcription regulator HTH%2C AraC%2C bacterial type;protein_id=EGT80207.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50094 50598 . - . ID=id-GGE_1715;Dbxref=InterPro:IPR003313;Note=superfamily:SSF51215~regulatory protein arac~transcription regulator hth%2C arac%2C arabinose-binding/dimerization;gbkey=misc_feature;locus_tag=GGE_1715 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50127 50280 . - . ID=id-GGE_1715-2;Note=superfamily%3B label: Cupin_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1715 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50130 50553 . - . ID=id-GGE_1715-3;Dbxref=InterPro:IPR003313,PFAM:PF02311;Note=arac_binding~transcription regulator hth%2C arac%2C arabinose-binding/dimerization;gbkey=misc_feature;locus_tag=GGE_1715 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50202 50205 . - . ID=id-GGE_1715-4;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;locus_tag=GGE_1715 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50127 50865 . + . ID=id-AFQR01000033.1:50127..50865;Dbxref=InterPro:IPR020449;Note=FPrintScan:PR00032~htharac~transcription regulator hth%2C arac%2C bacterial type;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50130 50910 . + . ID=id-AFQR01000033.1:50130..50910;Dbxref=InterPro:IPR020449;Note=FPrintScan:PR00032~htharac~transcription regulator hth%2C arac%2C bacterial type;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50193 50850 . + . ID=id-AFQR01000033.1:50193..50850;Note=superfamily%3B label: HTH_AraC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50196 50847 . + . ID=id-AFQR01000033.1:50196..50847;Dbxref=InterPro:IPR018060,PFAM:PF00165;Note=hth_arac~dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50205 50688 . + . ID=id-AFQR01000033.1:50205..50688;Dbxref=InterPro:IPR018060,PFAM:PF00165;Note=superfamily~hth_arac~dna-binding protein%3B label: HTH_AraC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50208 50820 . + . ID=id-AFQR01000033.1:50208..50820;Dbxref=InterPro:IPR018062;Note=PatternScan:PS00041~hth_arac_family_1~helix-turn-helix%2C arac type%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50214 50664 . + . ID=id-AFQR01000033.1:50214..50664;Dbxref=InterPro:IPR018062;Note=PatternScan:PS00041~hth_arac_family_1~helix-turn-helix%2C arac type%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50226 50820 . + . ID=id-AFQR01000033.1:50226..50820;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50229 50817 . + . ID=id-AFQR01000033.1:50229..50817;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50241 50655 . + . ID=id-AFQR01000033.1:50241..50655;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50244 50655 . + . ID=id-AFQR01000033.1:50244..50655;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50331 50709 . + . ID=id-AFQR01000033.1:50331..50709;Note=multi-dom%3B label: HTH_ARAC;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50376 50670 . + . ID=id-AFQR01000033.1:50376..50670;Dbxref=InterPro:IPR018060;Note=ProfileScan:PS01124~hth_arac_family_2~dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50391 50655 . + . ID=id-AFQR01000033.1:50391..50655;Note=HMMPanther:PTHR11019:SF43~subfamily not named~HMMPanther:PTHR11019~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 50750 50759 . + . ID=id-AFQR01000033.1:50750..50759;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 51087 51428 . + . ID=gene-GGE_1716;Name=GGE_1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank CDS 51087 51428 . + 0 ID=cds-EGT80208.1;Parent=gene-GGE_1716;Dbxref=GeneID:2495685,InterPro:IPR003779,InterPro:IPR004675,PFAM:PF02627,TIGRFAM:TIGR00778,NCBI_GP:EGT80208.1;Name=EGT80208.1;Note=HI_1053;gbkey=CDS;locus_tag=GGE_1716;product=putative ahpD-like protein;protein_id=EGT80208.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51087 51420 . + . ID=id-GGE_1716;Note=Gene3D:1.20.1290.10;gbkey=misc_feature;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51099 51405 . + . ID=id-GGE_1716-2;Note=superfamily:SSF69118~ahpd-like;gbkey=misc_feature;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51105 51276 . + . ID=id-GGE_1716-3;Note=superfamily%3B label: CMD superfamily;gbkey=misc_feature;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51159 51339 . + . ID=id-GGE_1716-4;Dbxref=InterPro:IPR003779,PFAM:PF02627;Note=cmd~carboxymuconolactone decarboxylase;gbkey=misc_feature;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51210 51240 . + . ID=id-GGE_1716-5;Dbxref=InterPro:IPR004675,TIGRFAM:TIGR00778;Note=ahpd_dom: alkylhydroperoxidase ahpd family c~alkylhydroperoxidase ahpd core;gbkey=misc_feature;locus_tag=GGE_1716 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51123 51168 . - . ID=id-AFQR01000033.1:51123..51168;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51174 51294 . - . ID=id-AFQR01000033.1:51174..51294;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 51546 52139 . - . ID=gene-GGE_1717;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank CDS 51546 52139 . - 0 ID=cds-EGT80209.1;Parent=gene-GGE_1717;Dbxref=GeneID:81335953,InterPro:IPR001352,InterPro:IPR012337,PFAM:PF01351,NCBI_GP:EGT80209.1;Name=EGT80209.1;Ontology_term=GO:0003723,GO:0003676,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||,nucleic acid binding|0003676||,ribonuclease H activity|0004523||;locus_tag=GGE_1717;product=Ribonuclease HII;protein_id=EGT80209.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51546 52134 . - . ID=id-GGE_1717;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=rnhB;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51567 52113 . - . ID=id-GGE_1717-2;Dbxref=InterPro:IPR001352;Note=HMMPanther:PTHR10954~ribonuclease h2 subunit a~ribonuclease hii/hiii;gbkey=misc_feature;gene=rnhB;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51576 51972 . - . ID=id-GGE_1717-3;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=rnhB;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51582 52086 . - . ID=id-GGE_1717-4;Note=specific~superfamily%3B label: RNase_H superfamily;gbkey=misc_feature;gene=rnhB;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51582 52083 . - . ID=id-GGE_1717-5;Dbxref=InterPro:IPR001352,PFAM:PF01351;Note=rnase_hii~ribonuclease hii/hiii;gbkey=misc_feature;gene=rnhB;locus_tag=GGE_1717 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51606 51696 . + . ID=id-AFQR01000033.1:51606..51696;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 51830 51839 . + . ID=id-AFQR01000033.1:51830..51839;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 52132 53304 . - . ID=gene-GGE_1718;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank CDS 52132 53304 . - 0 ID=cds-EGT80210.1;Parent=gene-GGE_1718;Dbxref=GeneID:81335952,InterPro:IPR003835,PFAM:PF02684,TIGRFAM:TIGR00215,NCBI_GP:EGT80210.1;Name=EGT80210.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||;go_process=lipid A biosynthetic process|0009245||;locus_tag=GGE_1718;product=Lipid-A-disaccharide synthase;protein_id=EGT80210.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52132 53281 . - . ID=id-GGE_1718;Dbxref=InterPro:IPR003835,TIGRFAM:TIGR00215;Note=lpxb: lipid-a-disaccharide synthase~glycosyl transferase%2C family 19;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52147 53278 . - . ID=id-GGE_1718-2;Note=multi-dom%3B label: lpxB;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52147 53275 . - . ID=id-GGE_1718-3;Dbxref=InterPro:IPR003835;Note=HAMAP:MF_00392~lpxb~glycosyl transferase%2C family 19;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52150 53275 . - . ID=id-GGE_1718-4;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52156 53251 . - . ID=id-GGE_1718-5;Dbxref=InterPro:IPR003835,PFAM:PF02684;Note=lpxb~glycosyl transferase%2C family 19;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52252 52261 . - . ID=id-GGE_1718-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 52285 52990 . - . ID=id-GGE_1718-7;Note=superfamily%3B label: PRK14089 superfamily;gbkey=misc_feature;gene=lpxB;locus_tag=GGE_1718 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53324 53333 . - . ID=id-AFQR01000033.1:53324..53333;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53341 53350 . + . ID=id-AFQR01000033.1:53341..53350;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 53371 54159 . - . ID=gene-GGE_1719;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank CDS 53371 54159 . - 0 ID=cds-EGT80211.1;Parent=gene-GGE_1719;Dbxref=GeneID:166231983,InterPro:IPR001451,InterPro:IPR010137,InterPro:IPR011004,InterPro:IPR018357,PFAM:PF00132,PIR:PIRSF000456,TIGRFAM:TIGR01852,NCBI_GP:EGT80211.1;Name=EGT80211.1;Ontology_term=GO:0008610,GO:0008780,GO:0016740;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||,transferase activity|0016740||;go_process=lipid biosynthetic process|0008610||;locus_tag=GGE_1719;product=Acyl-acyl-carrier-protein--UDP-N-acetylglucosamine O-acyltransferase;protein_id=EGT80211.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53371 54157 . - . ID=id-GGE_1719;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53371 54151 . - . ID=id-GGE_1719-2;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53380 54151 . - . ID=id-GGE_1719-3;Dbxref=InterPro:IPR010137,PIR:PIRSF000456;Note=acyl-[acyl-carrier-protein]:udp-n-acetylglucosamine o-acyltransferase~acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o-acyltransferase;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53380 53656 . - . ID=id-GGE_1719-4;Note=Gene3D:2.160.10.10;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53386 54145 . - . ID=id-GGE_1719-5;Dbxref=InterPro:IPR010137;Note=multi-dom~HAMAP:MF_00387~lpxa~acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o-acyltransferase%3B label: PRK05289;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53395 54133 . - . ID=id-GGE_1719-6;Dbxref=InterPro:IPR010137,TIGRFAM:TIGR01852;Note=lipid_a_lpxa: acyl-[acyl-carrier-protein~acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o-acyltransferase;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53458 54073 . - . ID=id-GGE_1719-7;Note=HMMPanther:PTHR19136:SF32~acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o-acyltransferase~HMMPanther:PTHR19136~family not named;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53665 53704 . - . ID=id-GGE_1719-8;Note=Gene3D:2.160.10.10;gbkey=misc_feature;gene=lpxA;locus_tag=GGE_1719 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53413 53413 . + . ID=id-AFQR01000033.1:53413..53413;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53422 53422 . + . ID=id-AFQR01000033.1:53422..53422;Dbxref=InterPro:IPR001451,PFAM:PF00132;Note=hexapep~bacterial transferase hexapeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53458 53830 . + . ID=id-AFQR01000033.1:53458..53830;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53458 53776 . + . ID=id-AFQR01000033.1:53458..53776;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 53533 53998 . + . ID=id-AFQR01000033.1:53533..53998;Note=Gene3D:1.20.1180.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 54174 54620 . - . ID=gene-GGE_1720;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank CDS 54174 54620 . - 0 ID=cds-EGT80212.1;Parent=gene-GGE_1720;Dbxref=GeneID:1169597,InterPro:IPR010084,InterPro:IPR013114,PFAM:PF07977,TIGRFAM:TIGR01750,NCBI_GP:EGT80212.1;Name=EGT80212.1;Ontology_term=GO:0006633,GO:0005737,GO:0016836;gbkey=CDS;gene=fabZ;go_component=cytoplasm|0005737||;go_function=hydro-lyase activity|0016836||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_1720;product=3R-hydroxymyristoyl-acyl-carrier-protein dehydratase;protein_id=EGT80212.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54186 54606 . - . ID=id-GGE_1720;Note=Gene3D:3.10.129.10;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54201 54594 . - . ID=id-GGE_1720-2;Dbxref=InterPro:IPR010084;Note=HAMAP:MF_00406~fabz~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54201 54591 . - . ID=id-GGE_1720-3;Dbxref=InterPro:IPR010084,TIGRFAM:TIGR01750;Note=fabz: beta-hydroxyacyl-(acyl-carrier-protein~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54210 54585 . - . ID=id-GGE_1720-4;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54228 54567 . - . ID=id-GGE_1720-5;Note=specific~superfamily%3B label: FabZ;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54228 54549 . - . ID=id-GGE_1720-6;Dbxref=InterPro:IPR013114,PFAM:PF07977;Note=faba~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase%2C faba/fabz;gbkey=misc_feature;gene=fabZ;locus_tag=GGE_1720 GCA_000222085.2|AFQR01000033.1 Genbank gene 54706 56304 . - . ID=gene-GGE_1721;Name=GGE_1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1721 GCA_000222085.2|AFQR01000033.1 Genbank CDS 54706 56304 . - 0 ID=cds-EGT80213.1;Parent=gene-GGE_1721;Dbxref=GeneID:2495686,InterPro:IPR000917,InterPro:IPR017849,InterPro:IPR017850,InterPro:IPR020098,PFAM:PF00884,NCBI_GP:EGT80213.1;Name=EGT80213.1;Note=HI_1064;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_1721;product=Putative phosphoethanolamine transferase;protein_id=EGT80213.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 55333 55597 . - . ID=id-GGE_1721;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature;locus_tag=GGE_1721 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 55333 55561 . - . ID=id-GGE_1721-2;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1721 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 55339 55576 . - . ID=id-GGE_1721-3;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_1721 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 55882 55891 . - . ID=id-GGE_1721-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1721 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54742 55078 . + . ID=id-AFQR01000033.1:54742..55078;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54766 54841 . + . ID=id-AFQR01000033.1:54766..54841;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54766 54772 . + . ID=id-AFQR01000033.1:54766..54772;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54775 55147 . + . ID=id-AFQR01000033.1:54775..55147;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54775 55045 . + . ID=id-AFQR01000033.1:54775..55045;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54775 54919 . + . ID=id-AFQR01000033.1:54775..54919;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54778 54865 . + . ID=id-AFQR01000033.1:54778..54865;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 54913 56098 . + . ID=id-AFQR01000033.1:54913..56098;Dbxref=InterPro:IPR020098;Note=BlastProDom:PD055757~y1063_haein_p44107~uncharacterised protein family hi1063%2C transferase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 55099 55690 . + . ID=id-AFQR01000033.1:55099..55690;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 56396 57109 . + . ID=gene-GGE_1722;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank CDS 56396 57109 . + 0 ID=cds-EGT80214.1;Parent=gene-GGE_1722;Dbxref=GeneID:1172793,InterPro:IPR001048,InterPro:IPR011817,InterPro:IPR015963,PFAM:PF00696,PIR:PIRSF005650,TIGRFAM:TIGR02075,NCBI_GP:EGT80214.1;Name=EGT80214.1;Ontology_term=GO:0008652,GO:0006221,GO:0005737,GO:0033862,GO:0009041;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||;go_function=UMP kinase activity|0033862||,uridylate kinase activity|0009041||;go_process=cellular amino acid biosynthetic process|0008652||,pyrimidine nucleotide biosynthetic process|0006221||;locus_tag=GGE_1722;product=Uridylate kinase;protein_id=EGT80214.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56396 57104 . + . ID=id-GGE_1722;Note=HMMPanther:PTHR26059:SF1~subfamily not named~HMMPanther:PTHR26059~family not named;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56402 57104 . + . ID=id-GGE_1722-2;Dbxref=InterPro:IPR001048;Note=Gene3D:3.40.1160.10~aspartate/glutamate/uridylate kinase~superfamily:SSF53633~carbamate kinase-like~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56408 57098 . + . ID=id-GGE_1722-3;Dbxref=InterPro:IPR011817,PIR:PIRSF005650;Note=uridylate kinase~uridylate kinase;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56414 57092 . + . ID=id-GGE_1722-4;Dbxref=InterPro:IPR015963,TIGRFAM:TIGR02075;Note=pyrh_bact: ump kinase~uridylate kinase%2C bacteria;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56417 57086 . + . ID=id-GGE_1722-5;Note=specific~superfamily%3B label: AAK superfamily;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56417 57026 . + . ID=id-GGE_1722-6;Dbxref=InterPro:IPR001048,PFAM:PF00696;Note=aa_kinase~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=pyrH;locus_tag=GGE_1722 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 56450 56516 . - . ID=id-AFQR01000033.1:56450..56516;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 57174 58700 . - . ID=gene-GGE_1723;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank CDS 57174 58700 . - 0 ID=cds-EGT80215.1;Parent=gene-GGE_1723;Dbxref=GeneID:1168784,InterPro:IPR002226,InterPro:IPR010582,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020835,PFAM:PF00199,PFAM:PF06628,NCBI_GP:EGT80215.1;Name=EGT80215.1;Ontology_term=GO:0055114,GO:0006979,GO:0004096,GO:0020037,GO:0005506;gbkey=CDS;gene=katA;go_function=catalase activity|0004096||,heme binding|0020037||,iron ion binding|0005506||;go_process=oxidation-reduction process|0055114||,response to oxidative stress|0006979||;locus_tag=GGE_1723;product=Catalase;protein_id=EGT80215.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57207 58620 . - . ID=id-GGE_1723;Dbxref=InterPro:IPR020835;Note=multi-dom~superfamily:SSF56634~heme-dependent catalase-like~catalase-like domain%2C haem-dependent%3B label: KatE;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57210 58614 . - . ID=id-GGE_1723-2;Dbxref=InterPro:IPR011614;Note=ProfileScan:PS51402~catalase_3~catalase;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57219 58593 . - . ID=id-GGE_1723-3;Note=HMMPanther:PTHR11465~family not named;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57219 58230 . - . ID=id-GGE_1723-4;Dbxref=InterPro:IPR011614;Note=Gene3D:2.40.180.10~catalase;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57222 58326 . - . ID=id-GGE_1723-5;Dbxref=InterPro:IPR018028,PFAM:PF00199;Note=catalase~catalase-related subgroup;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57342 58464 . - . ID=id-GGE_1723-6;Note=specific~superfamily%3B label: catalase_clade_3;gbkey=misc_feature;gene=katA;locus_tag=GGE_1723 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57201 58200 . + . ID=id-AFQR01000033.1:57201..58200;Dbxref=InterPro:IPR002226;Note=PatternScan:PS00437~catalase_1~catalase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57225 57330 . + . ID=id-AFQR01000033.1:57225..57330;Dbxref=InterPro:IPR002226;Note=PatternScan:PS00438~catalase_2~catalase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57228 57513 . + . ID=id-AFQR01000033.1:57228..57513;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57231 57570 . + . ID=id-AFQR01000033.1:57231..57570;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57231 57450 . + . ID=id-AFQR01000033.1:57231..57450;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57246 57261 . + . ID=id-AFQR01000033.1:57246..57261;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57255 58161 . + . ID=id-AFQR01000033.1:57255..58161;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57258 58065 . + . ID=id-AFQR01000033.1:57258..58065;Dbxref=InterPro:IPR018028;Note=FPrintScan:PR00067~catalase~catalase-related subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 57372 58437 . + . ID=id-AFQR01000033.1:57372..58437;Dbxref=InterPro:IPR010582,PFAM:PF06628;Note=catalase-rel~catalase-related immune responsive;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 58901 59386 . - . ID=gene-GGE_1724;Name=GGE_1724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1724 GCA_000222085.2|AFQR01000033.1 Genbank CDS 58901 59386 . - 0 ID=cds-EGT80216.1;Parent=gene-GGE_1724;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,PFAM:PF00589,NCBI_GP:EGT80216.1;Name=EGT80216.1;Note=Hypothetical integrase-like%2C catalytic core%2C phage;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1724;product=putative integrase-like%2C catalytic core%2C phage;protein_id=EGT80216.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 58901 59384 . - . ID=id-GGE_1724;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1724 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 58943 59336 . - . ID=id-GGE_1724-2;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_1724 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 58952 59324 . - . ID=id-GGE_1724-3;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1724 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 58955 59315 . - . ID=id-GGE_1724-4;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1724 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 59786 59861 . - . ID=id-AFQR01000033.1:59786..59861;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 60317 61759 . - . ID=gene-GGE_1725;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank CDS 60317 61759 . - 0 ID=cds-EGT80217.1;Parent=gene-GGE_1725;Dbxref=GeneID:1174506,InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004527,InterPro:IPR008925,InterPro:IPR014729,InterPro:IPR020058,InterPro:IPR020061,InterPro:IPR020751,PFAM:PF00749,TIGRFAM:TIGR00464,NCBI_GP:EGT80217.1;Name=EGT80217.1;Ontology_term=GO:0006424,GO:0043039,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004818,GO:0016876,GO:0000166;gbkey=CDS;gene=gltX;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,glutamate-tRNA ligase activity|0004818||,ligase activity forming aminoacyl-tRNA and related compounds|0016876||,nucleotide binding|0000166||;go_process=glutamyl-tRNA aminoacylation|0006424||,tRNA aminoacylation|0043039||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1725;product=Glutamyl-tRNA synthetase;protein_id=EGT80217.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60347 61730 . - . ID=id-GGE_1725;Dbxref=InterPro:IPR000924;Note=HMMPanther:PTHR10119:SF1~glutamyl-trna synthetase~HMMPanther:PTHR10119~glutamyl/glutaminyl-trna synthetase~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 61709 . - . ID=id-GGE_1725-2;Dbxref=InterPro:IPR004527,TIGRFAM:TIGR00464;Note=gltx_bact: glutamyl-trna synthetase~glutamyl-trna synthetase%2C class ic%2C bacterial/mitochondrial;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 61694 . - . ID=id-GGE_1725-3;Note=multi-dom%3B label: gltX;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 61226 . - . ID=id-GGE_1725-4;Dbxref=InterPro:IPR020058,PFAM:PF00749;Note=trna-synt_1c~glutamyl/glutaminyl-trna synthetase%2C class ic%2C catalytic domain;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 61205 . - . ID=id-GGE_1725-5;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 60593 . - . ID=id-GGE_1725-6;Note=specific~superfamily%3B label: GluRS_core;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60557 60653 . - . ID=id-GGE_1725-7;Note=Gene3D:3.90.800.10;gbkey=misc_feature;gene=gltX;locus_tag=GGE_1725 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60344 60935 . + . ID=id-AFQR01000033.1:60344..60935;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60350 60887 . + . ID=id-AFQR01000033.1:60350..60887;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60353 60413 . + . ID=id-AFQR01000033.1:60353..60413;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60353 60380 . + . ID=id-AFQR01000033.1:60353..60380;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60356 61442 . + . ID=id-AFQR01000033.1:60356..61442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60356 60371 . + . ID=id-AFQR01000033.1:60356..60371;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60359 60458 . + . ID=id-AFQR01000033.1:60359..60458;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60362 61502 . + . ID=id-AFQR01000033.1:60362..61502;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60470 60893 . + . ID=id-AFQR01000033.1:60470..60893;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60531 60540 . + . ID=id-AFQR01000033.1:60531..60540;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60563 61049 . + . ID=id-AFQR01000033.1:60563..61049;Dbxref=InterPro:IPR020061;Note=Gene3D:1.10.1160.10~glutamyl/glutaminyl-trna synthetase%2C class ic%2C alpha-bundle domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60614 61439 . + . ID=id-AFQR01000033.1:60614..61439;Dbxref=InterPro:IPR020751;Note=Gene3D:1.10.10.350~aminoacyl-trna synthetase%2C class i%2C anticodon-binding domain%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60731 60878 . + . ID=id-AFQR01000033.1:60731..60878;Note=specific~superfamily%3B label: GluRS_core;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 60809 61247 . + . ID=id-AFQR01000033.1:60809..61247;Dbxref=InterPro:IPR008925;Note=superfamily:SSF48163~an anticodon-binding domain of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class i%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 61650 61659 . + . ID=id-AFQR01000033.1:61650..61659;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 62509 64164 . + . ID=gene-GGE_1726;Name=GGE_1726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1726 GCA_000222085.2|AFQR01000033.1 Genbank CDS 62509 64164 . + 0 ID=cds-EGT80218.1;Parent=gene-GGE_1726;Dbxref=GeneID:1175206,InterPro:IPR000917,InterPro:IPR017849,PFAM:PF00884,NCBI_GP:EGT80218.1;Name=EGT80218.1;Note=HI_0275;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_1726;product=putative sulfatase;protein_id=EGT80218.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62509 64159 . + . ID=id-GGE_1726;Note=multi-dom%3B label: MdoB;gbkey=misc_feature;locus_tag=GGE_1726 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62515 62563 . + . ID=id-GGE_1726-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1726 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62527 62731 . + . ID=id-GGE_1726-3;Note=superfamily%3B label: YCCS superfamily;gbkey=misc_feature;locus_tag=GGE_1726 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 63142 63316 . + . ID=id-GGE_1726-4;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1726 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62563 62662 . - . ID=id-AFQR01000033.1:62563..62662;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62578 62881 . - . ID=id-AFQR01000033.1:62578..62881;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62578 62794 . - . ID=id-AFQR01000033.1:62578..62794;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 62578 62581 . - . ID=id-AFQR01000033.1:62578..62581;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 63096 63105 . - . ID=id-AFQR01000033.1:63096..63105;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 63163 63289 . - . ID=id-AFQR01000033.1:63163..63289;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 63199 63271 . - . ID=id-AFQR01000033.1:63199..63271;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 64208 65005 . - . ID=gene-GGE_1727;Name=GGE_1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1727 GCA_000222085.2|AFQR01000033.1 Genbank CDS 64208 65005 . - 0 ID=cds-EGT80219.1;Parent=gene-GGE_1727;Dbxref=InterPro:IPR004664,InterPro:IPR017039,PFAM:PF03631,PIR:PIRSF035875,TIGRFAM:TIGR00765,NCBI_GP:EGT80219.1;Name=EGT80219.1;Note=NTHI0384;Ontology_term=GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||;locus_tag=GGE_1727;product=UPF0761 membrane protein;protein_id=EGT80219.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64208 64994 . - . ID=id-GGE_1727;Note=superfamily%3B label: Ribonuclease_BN superfamily;gbkey=misc_feature;locus_tag=GGE_1727 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64220 64994 . - . ID=id-GGE_1727-2;Dbxref=InterPro:IPR004664,PIR:PIRSF035875;Note=HAMAP:MF_00672~upf0761~trna processing ribonuclease bn~ribonuclease bn-related;gbkey=misc_feature;locus_tag=GGE_1727 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64226 64982 . - . ID=id-GGE_1727-3;Dbxref=InterPro:IPR017039,TIGRFAM:TIGR00765;Note=yihy_not_rbn: yihy family protein~ribonuclease bn;gbkey=misc_feature;locus_tag=GGE_1727 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64259 64940 . - . ID=id-GGE_1727-4;Dbxref=InterPro:IPR004664,PFAM:PF03631;Note=ribonuclease_bn~ribonuclease bn-related;gbkey=misc_feature;locus_tag=GGE_1727 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64241 64694 . + . ID=id-AFQR01000033.1:64241..64694;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64244 64631 . + . ID=id-AFQR01000033.1:64244..64631;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64268 64475 . + . ID=id-AFQR01000033.1:64268..64475;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64277 64904 . + . ID=id-AFQR01000033.1:64277..64904;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64277 64808 . + . ID=id-AFQR01000033.1:64277..64808;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64277 64706 . + . ID=id-AFQR01000033.1:64277..64706;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64277 64595 . + . ID=id-AFQR01000033.1:64277..64595;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 64277 64277 . + . ID=id-AFQR01000033.1:64277..64277;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 65002 65484 . - . ID=gene-GGE_1728;Name=GGE_1728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank CDS 65002 65484 . - 0 ID=cds-EGT80220.1;Parent=gene-GGE_1728;Dbxref=GeneID:166234775,InterPro:IPR004027,InterPro:IPR023006,PFAM:PF02810,NCBI_GP:EGT80220.1;Name=EGT80220.1;Note=CGSHiEE_01665;gbkey=CDS;locus_tag=GGE_1728;product=UPF0225 protein;protein_id=EGT80220.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65020 65074 . - . ID=id-GGE_1728;Note=superfamily:SSF103642~sec-c motif;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65026 65461 . - . ID=id-GGE_1728-2;Note=multi-dom%3B label: PRK01752;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65026 65383 . - . ID=id-GGE_1728-3;Dbxref=InterPro:IPR023006;Note=HAMAP:MF_00612~upf0225~uncharacterised protein family upf0225;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65029 65452 . - . ID=id-GGE_1728-4;Note=Gene3D:3.10.450.50;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65032 65383 . - . ID=id-GGE_1728-5;Note=superfamily%3B label: SEC-C superfamily;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65032 65059 . - . ID=id-GGE_1728-6;Dbxref=InterPro:IPR004027,PFAM:PF02810;Note=sec-c~sec-c motif;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65185 65194 . - . ID=id-GGE_1728-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1728 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65056 65422 . + . ID=id-AFQR01000033.1:65056..65422;Note=superfamily%3B label: SEC-C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65062 65422 . + . ID=id-AFQR01000033.1:65062..65422;Dbxref=InterPro:IPR004027,PFAM:PF02810;Note=sec-c~sec-c motif;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65068 65413 . + . ID=id-AFQR01000033.1:65068..65413;Note=superfamily:SSF103642~sec-c motif;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65459 65468 . + . ID=id-AFQR01000033.1:65459..65468;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 65487 66149 . - . ID=gene-GGE_1729;Name=GGE_1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank CDS 65487 66149 . - 0 ID=cds-EGT80221.1;Parent=gene-GGE_1729;Dbxref=InterPro:IPR005163,InterPro:IPR005302,InterPro:IPR011037,InterPro:IPR015808,PFAM:PF03473,PFAM:PF03475,NCBI_GP:EGT80221.1;Name=EGT80221.1;Note=HI_0278;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||,molybdenum ion binding|0030151||,pyridoxal phosphate binding|0030170||;locus_tag=GGE_1729;product=putative pyruvate kinase-like%2C insert domain-containing protein;protein_id=EGT80221.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65487 66138 . - . ID=id-GGE_1729;Dbxref=InterPro:IPR015808;Note=Gene3D:2.40.33.20~molybdenum cofactor sulfurase-like;gbkey=misc_feature;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65487 66132 . - . ID=id-GGE_1729-2;Dbxref=InterPro:IPR011037;Note=superfamily:SSF50800~pk beta-barrel domain-like~pyruvate kinase-like%2C insert domain;gbkey=misc_feature;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65577 65901 . - . ID=id-GGE_1729-3;Dbxref=InterPro:IPR005302;Note=ProfileScan:PS51340~mosc~molybdenum cofactor sulfurase;gbkey=misc_feature;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65610 65865 . - . ID=id-GGE_1729-4;Note=superfamily%3B label: MOSC superfamily;gbkey=misc_feature;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65616 65856 . - . ID=id-GGE_1729-5;Dbxref=InterPro:IPR005302,PFAM:PF03473;Note=mosc~molybdenum cofactor sulfurase;gbkey=misc_feature;locus_tag=GGE_1729 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65517 65697 . + . ID=id-AFQR01000033.1:65517..65697;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65556 66033 . + . ID=id-AFQR01000033.1:65556..66033;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 65622 66006 . + . ID=id-AFQR01000033.1:65622..66006;Dbxref=InterPro:IPR005163,PFAM:PF03475;Note=3-alpha~3-alpha domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 66273 67772 . + . ID=gene-GGE_1730;Name=GGE_1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1730 GCA_000222085.2|AFQR01000033.1 Genbank CDS 66273 67772 . + 0 ID=cds-EGT80222.1;Parent=gene-GGE_1730;Dbxref=GeneID:293390885,InterPro:IPR008571,PFAM:PF05872,NCBI_GP:EGT80222.1;Name=EGT80222.1;Note=ZP_06635219;gbkey=CDS;locus_tag=GGE_1730;product=conserved ATP-binding protein;protein_id=EGT80222.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66279 67767 . + . ID=id-GGE_1730;Note=multi-dom%3B label: DUF853;gbkey=misc_feature;locus_tag=GGE_1730 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66291 67749 . + . ID=id-GGE_1730-2;Dbxref=InterPro:IPR008571,PFAM:PF05872;Note=duf853~protein of unknown function duf853%2C nucleotide triphosphate hydrolase%2C putative;gbkey=misc_feature;locus_tag=GGE_1730 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66294 67431 . + . ID=id-GGE_1730-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1730 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66330 66540 . + . ID=id-GGE_1730-4;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1730 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66303 66627 . - . ID=id-AFQR01000033.1:66303..66627;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66312 66699 . - . ID=id-AFQR01000033.1:66312..66699;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66318 67557 . - . ID=id-AFQR01000033.1:66318..67557;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 66813 66882 . - . ID=id-AFQR01000033.1:66813..66882;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 67856 68635 . + . ID=gene-GGE_1731;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank CDS 67856 68635 . + 0 ID=cds-EGT80223.1;Parent=gene-GGE_1731;Dbxref=GeneID:37538284,InterPro:IPR000845,InterPro:IPR010058,InterPro:IPR018016,InterPro:IPR018017,PFAM:PF01048,TIGRFAM:TIGR01718,NCBI_GP:EGT80223.1;Name=EGT80223.1;Ontology_term=GO:0009116,GO:0009166,GO:0005737,GO:0003824,GO:0016763,GO:0004850;gbkey=CDS;gene=udp;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,transferase activity transferring pentosyl groups|0016763||,uridine phosphorylase activity|0004850||;go_process=nucleoside metabolic process|0009116||,nucleotide catabolic process|0009166||;locus_tag=GGE_1731;product=Uridine phosphorylase;protein_id=EGT80223.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67874 68615 . + . ID=id-GGE_1731;Note=multi-dom%3B label: Udp;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67880 68609 . + . ID=id-GGE_1731-2;Note=superfamily%3B label: PNP_UDP_1 superfamily;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67880 68603 . + . ID=id-GGE_1731-3;Note=superfamily:SSF53167~purine and uridine phosphorylases;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67889 68603 . + . ID=id-GGE_1731-4;Dbxref=InterPro:IPR018017;Note=HMMPanther:PTHR21234:SF7~purine nucleoside phosphorylase~HMMPanther:PTHR21234~family not named~nucleoside phosphorylase;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67889 68600 . + . ID=id-GGE_1731-5;Dbxref=InterPro:IPR010058,TIGRFAM:TIGR01718;Note=uridine-psphlse: uridine phosphorylas~uridine phosphorylase;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67928 68549 . + . ID=id-GGE_1731-6;Note=Gene3D:3.40.50.1580;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67934 68552 . + . ID=id-GGE_1731-7;Dbxref=InterPro:IPR000845,PFAM:PF01048;Note=pnp_udp_1~nucleoside phosphorylase domain;gbkey=misc_feature;gene=udp;locus_tag=GGE_1731 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 67904 68069 . - . ID=id-AFQR01000033.1:67904..68069;Dbxref=InterPro:IPR018016;Note=PatternScan:PS01232~pnp_udp_1~nucleoside phosphorylase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 68281 68290 . - . ID=id-AFQR01000033.1:68281..68290;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 69428 69727 . - . ID=gene-GGE_1732;Name=GGE_1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1732 GCA_000222085.2|AFQR01000033.1 Genbank CDS 69428 69727 . - 0 ID=cds-EGT80224.1;Parent=gene-GGE_1732;Dbxref=NCBI_GP:EGT80224.1;Name=EGT80224.1;Note=HI_1099;gbkey=CDS;locus_tag=GGE_1732;product=putative lipoprotein;protein_id=EGT80224.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 69428 69485 . - . ID=id-GGE_1732;Note=superfamily%3B label: LPAM_1 superfamily;gbkey=misc_feature;locus_tag=GGE_1732 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 69428 69479 . - . ID=id-GGE_1732-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1732 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 69470 69656 . + . ID=id-AFQR01000033.1:69470..69656;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 69738 70268 . - . ID=gene-GGE_1733;Name=GGE_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1733 GCA_000222085.2|AFQR01000033.1 Genbank CDS 69738 70268 . - 0 ID=cds-EGT80225.1;Parent=gene-GGE_1733;Dbxref=GeneID:301169839,NCBI_GP:EGT80225.1;Name=EGT80225.1;Note=CBW29443~HIB_12560;gbkey=CDS;locus_tag=GGE_1733;product=Hypothetical protein;protein_id=EGT80225.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 69759 69798 . - . ID=id-GGE_1733;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1733 GCA_000222085.2|AFQR01000033.1 Genbank gene 70380 71297 . - . ID=gene-GGE_1734;Name=GGE_1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1734 GCA_000222085.2|AFQR01000033.1 Genbank CDS 70380 71297 . - 0 ID=cds-EGT80226.1;Parent=gene-GGE_1734;Dbxref=GeneID:145634255,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR017560,InterPro:IPR019734,TIGRFAM:TIGR03142,NCBI_GP:EGT80226.1;Name=EGT80226.1;Note=ZP_01789966;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_1734;product=TPR-repeat-containing protein;protein_id=EGT80226.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70380 71277 . - . ID=id-GGE_1734;Note=multi-dom%3B label: COG4235;gbkey=misc_feature;locus_tag=GGE_1734 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70386 70731 . - . ID=id-GGE_1734-2;Dbxref=InterPro:IPR017560,TIGRFAM:TIGR03142;Note=cytochro_ccmi: cytochrome c-type biogen~cytochrome c-type biogenesis protein ccmi;gbkey=misc_feature;locus_tag=GGE_1734 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70389 70725 . - . ID=id-GGE_1734-3;Note=superfamily%3B label: cytochro_ccmI superfamily;gbkey=misc_feature;locus_tag=GGE_1734 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70392 70440 . - . ID=id-GGE_1734-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1734 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70416 70566 . + . ID=id-AFQR01000033.1:70416..70566;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70449 70665 . + . ID=id-AFQR01000033.1:70449..70665;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70467 70521 . + . ID=id-AFQR01000033.1:70467..70521;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70482 71097 . + . ID=id-AFQR01000033.1:70482..71097;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70482 70884 . + . ID=id-AFQR01000033.1:70482..70884;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70542 70836 . + . ID=id-AFQR01000033.1:70542..70836;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70632 70998 . + . ID=id-AFQR01000033.1:70632..70998;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70689 70887 . + . ID=id-AFQR01000033.1:70689..70887;Note=specific~superfamily%3B label: TPR;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70695 70884 . + . ID=id-AFQR01000033.1:70695..70884;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70716 70869 . + . ID=id-AFQR01000033.1:70716..70869;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 70773 70827 . + . ID=id-AFQR01000033.1:70773..70827;Note=HMMPanther:PTHR23083:SF238~subfamily not named~HMMPanther:PTHR23083~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 71298 71759 . - . ID=gene-GGE_1735;Name=GGE_1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1735 GCA_000222085.2|AFQR01000033.1 Genbank CDS 71298 71759 . - 0 ID=cds-EGT80227.1;Parent=gene-GGE_1735;Dbxref=GeneID:229843865,InterPro:IPR005616,PFAM:PF03918,NCBI_GP:EGT80227.1;Name=EGT80227.1;Note=ZP_04464006;gbkey=CDS;locus_tag=GGE_1735;product=cytochrome C-type biogenesis protein;protein_id=EGT80227.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71313 71736 . - . ID=id-GGE_1735;Note=superfamily%3B label: CcmH superfamily;gbkey=misc_feature;locus_tag=GGE_1735 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71313 71367 . - . ID=id-GGE_1735-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1735 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71316 71730 . - . ID=id-GGE_1735-3;Dbxref=InterPro:IPR005616,PFAM:PF03918;Note=ccmh~cytochrome c biogenesis protein ccmh;gbkey=misc_feature;locus_tag=GGE_1735 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71367 71376 . - . ID=id-GGE_1735-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1735 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71355 71607 . + . ID=id-AFQR01000033.1:71355..71607;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71367 71595 . + . ID=id-AFQR01000033.1:71367..71595;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 71759 72304 . - . ID=gene-GGE_1736;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank CDS 71759 72304 . - 0 ID=cds-EGT80228.1;Parent=gene-GGE_1736;Dbxref=GeneID:1169432,InterPro:IPR004799,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF08534,TIGRFAM:TIGR00385,NCBI_GP:EGT80228.1;Name=EGT80228.1;Ontology_term=GO:0045454,GO:0017004,GO:0006662,GO:0030288,GO:0015036,GO:0009055,GO:0016491,GO:0015035;gbkey=CDS;gene=dsbE;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=disulfide oxidoreductase activity|0015036||,electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,cytochrome complex assembly|0017004||,glycerol ether metabolic process|0006662||;locus_tag=GGE_1736;product=Thiol:disulfide interchange protein DsbE;protein_id=EGT80228.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71774 72275 . - . ID=id-GGE_1736;Dbxref=InterPro:IPR004799,TIGRFAM:TIGR00385;Note=dsbe: periplasmic protein thiol:disulfide ox~periplasmic protein thiol disulfide oxidoreductase dsbe;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71774 71816 . - . ID=id-GGE_1736-2;Note=transmembrane_regions;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71783 72266 . - . ID=id-GGE_1736-3;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71786 72248 . - . ID=id-GGE_1736-4;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438:SF20~subfamily not named~HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71873 72173 . - . ID=id-GGE_1736-5;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71879 72128 . - . ID=id-GGE_1736-6;Dbxref=InterPro:IPR013740,PFAM:PF08534;Note=redoxin~redoxin;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71885 72137 . - . ID=id-GGE_1736-7;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71894 72158 . - . ID=id-GGE_1736-8;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=dsbE;locus_tag=GGE_1736 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 71816 71969 . + . ID=id-AFQR01000033.1:71816..71969;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72309 72318 . - . ID=id-AFQR01000033.1:72309..72318;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 72417 74363 . - . ID=gene-GGE_1737;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank CDS 72417 74363 . - 0 ID=cds-EGT80229.1;Parent=gene-GGE_1737;Dbxref=GeneID:1168839,InterPro:IPR002541,InterPro:IPR003567,InterPro:IPR003568,PFAM:PF01578,TIGRFAM:TIGR00353,NCBI_GP:EGT80229.1;Name=EGT80229.1;Ontology_term=GO:0017004,GO:0015886,GO:0006461,GO:0008535,GO:0016020,GO:0015232;gbkey=CDS;gene=ccmF;go_component=membrane|0016020||;go_function=heme transporter activity|0015232||;go_process=cytochrome complex assembly|0017004||,heme transport|0015886||,protein complex assembly|0006461||,respiratory chain complex IV assembly|0008535||;locus_tag=GGE_1737;product=Cytochrome c-type biogenesis protein CcmF;protein_id=EGT80229.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72429 72492 . - . ID=id-GGE_1737;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72432 72486 . - . ID=id-GGE_1737-2;Note=transmembrane_regions;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72444 72456 . - . ID=id-GGE_1737-3;Note=seg;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72576 74184 . - . ID=id-GGE_1737-4;Dbxref=InterPro:IPR003568,TIGRFAM:TIGR00353;Note=nrfe: cytochrome c-type biogenesis protein c~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72606 74154 . - . ID=id-GGE_1737-5;Note=superfamily%3B label: Cytochrom_C_asm superfamily;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72684 73044 . - . ID=id-GGE_1737-6;Dbxref=InterPro:IPR002541,PFAM:PF01578;Note=cytochrom_c_asm~cytochrome c assembly protein;gbkey=misc_feature;gene=ccmF;locus_tag=GGE_1737 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72447 73470 . + . ID=id-AFQR01000033.1:72447..73470;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72453 73251 . + . ID=id-AFQR01000033.1:72453..73251;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72459 74310 . + . ID=id-AFQR01000033.1:72459..74310;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72459 72720 . + . ID=id-AFQR01000033.1:72459..72720;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72465 73359 . + . ID=id-AFQR01000033.1:72465..73359;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72465 72987 . + . ID=id-AFQR01000033.1:72465..72987;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72468 73302 . + . ID=id-AFQR01000033.1:72468..73302;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72468 72555 . + . ID=id-AFQR01000033.1:72468..72555;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72471 73473 . + . ID=id-AFQR01000033.1:72471..73473;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72471 73161 . + . ID=id-AFQR01000033.1:72471..73161;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72471 72813 . + . ID=id-AFQR01000033.1:72471..72813;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72471 72708 . + . ID=id-AFQR01000033.1:72471..72708;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72471 72627 . + . ID=id-AFQR01000033.1:72471..72627;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72474 73359 . + . ID=id-AFQR01000033.1:72474..73359;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72477 74268 . + . ID=id-AFQR01000033.1:72477..74268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72477 73890 . + . ID=id-AFQR01000033.1:72477..73890;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72477 73692 . + . ID=id-AFQR01000033.1:72477..73692;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72477 73602 . + . ID=id-AFQR01000033.1:72477..73602;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72477 73350 . + . ID=id-AFQR01000033.1:72477..73350;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72480 73242 . + . ID=id-AFQR01000033.1:72480..73242;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72480 73152 . + . ID=id-AFQR01000033.1:72480..73152;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72483 72543 . + . ID=id-AFQR01000033.1:72483..72543;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 73761 . + . ID=id-AFQR01000033.1:72486..73761;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 73587 . + . ID=id-AFQR01000033.1:72486..73587;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 73476 . + . ID=id-AFQR01000033.1:72486..73476;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 73248 . + . ID=id-AFQR01000033.1:72486..73248;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 73050 . + . ID=id-AFQR01000033.1:72486..73050;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 72945 . + . ID=id-AFQR01000033.1:72486..72945;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 72897 . + . ID=id-AFQR01000033.1:72486..72897;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72486 72780 . + . ID=id-AFQR01000033.1:72486..72780;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72489 72756 . + . ID=id-AFQR01000033.1:72489..72756;Dbxref=InterPro:IPR003568;Note=FPrintScan:PR01411~ccmfbiognsis~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72498 73050 . + . ID=id-AFQR01000033.1:72498..73050;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 72498 72657 . + . ID=id-AFQR01000033.1:72498..72657;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 73273 73282 . + . ID=id-AFQR01000033.1:73273..73282;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 74360 74881 . - . ID=gene-GGE_1738;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank CDS 74360 74881 . - 0 ID=cds-EGT80230.1;Parent=gene-GGE_1738;Dbxref=GeneID:1168836,InterPro:IPR004329,InterPro:IPR012340,PFAM:PF03100,NCBI_GP:EGT80230.1;Name=EGT80230.1;Ontology_term=GO:0017004,GO:0017003,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||;go_process=cytochrome complex assembly|0017004||,protein-heme linkage|0017003||;locus_tag=GGE_1738;product=Cytochrome c-type biogenesis protein CcmE;protein_id=EGT80230.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74360 74843 . - . ID=id-GGE_1738;Note=superfamily%3B label: CcmE superfamily;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74366 74801 . - . ID=id-GGE_1738-2;Dbxref=InterPro:IPR004329;Note=HAMAP:MF_01959~ccme~ccme/cycj protein;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74369 74771 . - . ID=id-GGE_1738-3;Dbxref=InterPro:IPR004329,PFAM:PF03100;Note=ccme~ccme/cycj protein;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74396 74417 . - . ID=id-GGE_1738-4;Note=transmembrane_regions;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74438 74681 . - . ID=id-GGE_1738-5;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74450 74705 . - . ID=id-GGE_1738-6;Dbxref=InterPro:IPR004329;Note=superfamily:SSF82093~heme chaperone ccme~ccme/cycj protein;gbkey=misc_feature;gene=ccmE;locus_tag=GGE_1738 GCA_000222085.2|AFQR01000033.1 Genbank gene 74878 75081 . - . ID=gene-GGE_1739;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=GGE_1739 GCA_000222085.2|AFQR01000033.1 Genbank CDS 74878 75081 . - 0 ID=cds-EGT80231.1;Parent=gene-GGE_1739;Dbxref=GeneID:1168833,InterPro:IPR007078,PFAM:PF04995,TIGRFAM:TIGR03141,NCBI_GP:EGT80231.1;Name=EGT80231.1;Ontology_term=GO:0006810,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral to membrane|0016021||;go_process=transport|0006810||;locus_tag=GGE_1739;product=Heme exporter protein D;protein_id=EGT80231.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74878 75079 . - . ID=id-GGE_1739;Note=superfamily%3B label: CcmD superfamily;gbkey=misc_feature;gene=ccmD;locus_tag=GGE_1739 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74908 75019 . - . ID=id-GGE_1739-2;Dbxref=InterPro:IPR007078,TIGRFAM:TIGR03141;Note=cytochro_ccmd: heme exporter protein cc~haem exporter protein d (ccmd);gbkey=misc_feature;gene=ccmD;locus_tag=GGE_1739 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74917 75013 . - . ID=id-GGE_1739-3;Dbxref=InterPro:IPR007078,PFAM:PF04995;Note=ccmd~haem exporter protein d (ccmd);gbkey=misc_feature;gene=ccmD;locus_tag=GGE_1739 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74923 74947 . - . ID=id-GGE_1739-4;Note=transmembrane_regions;gbkey=misc_feature;gene=ccmD;locus_tag=GGE_1739 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74923 74941 . + . ID=id-AFQR01000033.1:74923..74941;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74926 75013 . + . ID=id-AFQR01000033.1:74926..75013;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 74944 74983 . + . ID=id-AFQR01000033.1:74944..74983;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75115 75124 . - . ID=id-AFQR01000033.1:75115..75124;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 75124 75864 . - . ID=gene-GGE_1740;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=GGE_1740 GCA_000222085.2|AFQR01000033.1 Genbank CDS 75124 75864 . - 0 ID=cds-EGT80232.1;Parent=gene-GGE_1740;Dbxref=GeneID:1168831,InterPro:IPR002541,InterPro:IPR003557,PFAM:PF01578,TIGRFAM:TIGR01191,NCBI_GP:EGT80232.1;Name=EGT80232.1;Ontology_term=GO:0017004,GO:0015886,GO:0006461,GO:0008535,GO:0016020,GO:0015232;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||;go_function=heme transporter activity|0015232||;go_process=cytochrome complex assembly|0017004||,heme transport|0015886||,protein complex assembly|0006461||,respiratory chain complex IV assembly|0008535||;locus_tag=GGE_1740;product=Heme exporter protein C;protein_id=EGT80232.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75166 75637 . - . ID=id-GGE_1740;Dbxref=InterPro:IPR002541,PFAM:PF01578;Note=cytochrom_c_asm~cytochrome c assembly protein;gbkey=misc_feature;gene=ccmC;locus_tag=GGE_1740 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75187 75193 . - . ID=id-GGE_1740-2;Note=transmembrane_regions;gbkey=misc_feature;gene=ccmC;locus_tag=GGE_1740 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75259 75676 . - . ID=id-GGE_1740-3;Dbxref=InterPro:IPR003557,TIGRFAM:TIGR01191;Note=superfamily~ccmc: heme exporter protein ccmc~cytochrome c-type biogenesis protein ccmc%3B label: Cytochrom_C_asm superfamily;gbkey=misc_feature;gene=ccmC;locus_tag=GGE_1740 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75166 75208 . + . ID=id-AFQR01000033.1:75166..75208;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75178 75259 . + . ID=id-AFQR01000033.1:75178..75259;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75187 75487 . + . ID=id-AFQR01000033.1:75187..75487;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75187 75424 . + . ID=id-AFQR01000033.1:75187..75424;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75187 75310 . + . ID=id-AFQR01000033.1:75187..75310;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75190 75313 . + . ID=id-AFQR01000033.1:75190..75313;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75193 75715 . + . ID=id-AFQR01000033.1:75193..75715;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75193 75589 . + . ID=id-AFQR01000033.1:75193..75589;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75193 75508 . + . ID=id-AFQR01000033.1:75193..75508;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75193 75397 . + . ID=id-AFQR01000033.1:75193..75397;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75199 75736 . + . ID=id-AFQR01000033.1:75199..75736;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75205 75592 . + . ID=id-AFQR01000033.1:75205..75592;Dbxref=InterPro:IPR003557;Note=FPrintScan:PR01386~ccmcbiognsis~cytochrome c-type biogenesis protein ccmc;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75897 75906 . - . ID=id-AFQR01000033.1:75897..75906;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 75925 76590 . - . ID=gene-GGE_1741;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=GGE_1741 GCA_000222085.2|AFQR01000033.1 Genbank CDS 75925 76590 . - 0 ID=cds-EGT80233.1;Parent=gene-GGE_1741;Dbxref=GeneID:1168829,InterPro:IPR003544,PFAM:PF03379,TIGRFAM:TIGR01190,NCBI_GP:EGT80233.1;Name=EGT80233.1;Ontology_term=GO:0017004,GO:0015886,GO:0016020,GO:0015232;gbkey=CDS;gene=ccmB;go_component=membrane|0016020||;go_function=heme transporter activity|0015232||;go_process=cytochrome complex assembly|0017004||,heme transport|0015886||;locus_tag=GGE_1741;product=Heme exporter protein B;protein_id=EGT80233.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75934 76570 . - . ID=id-GGE_1741;Dbxref=InterPro:IPR003544,PFAM:PF03379;Note=ccmb~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature;gene=ccmB;locus_tag=GGE_1741 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75943 76558 . - . ID=id-GGE_1741-2;Dbxref=InterPro:IPR003544,TIGRFAM:TIGR01190;Note=superfamily~ccmb: heme exporter protein ccmb~cytochrome c-type biogenesis protein ccmb%3B label: CcmB superfamily;gbkey=misc_feature;gene=ccmB;locus_tag=GGE_1741 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75952 76096 . + . ID=id-AFQR01000033.1:75952..76096;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75976 76402 . + . ID=id-AFQR01000033.1:75976..76402;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75979 76084 . + . ID=id-AFQR01000033.1:75979..76084;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75979 76072 . + . ID=id-AFQR01000033.1:75979..76072;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75982 76228 . + . ID=id-AFQR01000033.1:75982..76228;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75982 75988 . + . ID=id-AFQR01000033.1:75982..75988;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75985 76393 . + . ID=id-AFQR01000033.1:75985..76393;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75985 76231 . + . ID=id-AFQR01000033.1:75985..76231;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75991 76006 . + . ID=id-AFQR01000033.1:75991..76006;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75994 76510 . + . ID=id-AFQR01000033.1:75994..76510;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75994 76399 . + . ID=id-AFQR01000033.1:75994..76399;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75994 76312 . + . ID=id-AFQR01000033.1:75994..76312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75994 76216 . + . ID=id-AFQR01000033.1:75994..76216;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75997 76504 . + . ID=id-AFQR01000033.1:75997..76504;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 75997 76153 . + . ID=id-AFQR01000033.1:75997..76153;Dbxref=InterPro:IPR003544;Note=FPrintScan:PR01414~ccmbbiognsis~cytochrome c-type biogenesis protein ccmb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 76595 77233 . - . ID=gene-GGE_1742;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank CDS 76595 77233 . - 0 ID=cds-EGT80234.1;Parent=gene-GGE_1742;Dbxref=GeneID:1168828,InterPro:IPR003439,InterPro:IPR005895,InterPro:IPR017871,PFAM:PF00005,TIGRFAM:TIGR01189,NCBI_GP:EGT80234.1;Name=EGT80234.1;Ontology_term=GO:0017004,GO:0030288,GO:0005524,GO:0016887,GO:0005215;gbkey=CDS;gene=ccmA;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=ATP binding|0005524||,ATPase activity|0016887||,transporter activity|0005215||;go_process=cytochrome complex assembly|0017004||;locus_tag=GGE_1742;product=Cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=EGT80234.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76613 77162 . - . ID=id-GGE_1742;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76616 77204 . - . ID=id-GGE_1742-2;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76616 77201 . - . ID=id-GGE_1742-3;Note=multi-dom%3B label: PRK13538;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76616 77195 . - . ID=id-GGE_1742-4;Dbxref=InterPro:IPR005895,TIGRFAM:TIGR01189;Note=ccma: heme abc exporter%2C atp-binding protein~abc transporter%2C haem export%2C ccma~ProfileScan:PS51243~ccma~abc transporter%2C haem export%2C ccma;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76616 77174 . - . ID=id-GGE_1742-5;Note=specific~superfamily%3B label: ABC_CcmA_heme_exporter;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76616 77165 . - . ID=id-GGE_1742-6;Note=HMMPanther:PTHR24220:SF5~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76622 77156 . - . ID=id-GGE_1742-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76733 76949 . - . ID=id-GGE_1742-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=ccmA;locus_tag=GGE_1742 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76640 77003 . + . ID=id-AFQR01000033.1:76640..77003;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 76701 76710 . + . ID=id-AFQR01000033.1:76701..76710;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 77498 78145 . + . ID=gene-GGE_1743;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank CDS 77498 78145 . + 0 ID=cds-EGT80235.1;Parent=gene-GGE_1743;Dbxref=GeneID:1174383,InterPro:IPR001189,InterPro:IPR019831,InterPro:IPR019832,InterPro:IPR019833,PFAM:PF00081,PFAM:PF02777,PIR:PIRSF000349,NCBI_GP:EGT80235.1;Name=EGT80235.1;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784;gbkey=CDS;gene=sodA;go_function=metal ion binding|0046872||,superoxide dismutase activity|0004784||;go_process=oxidation-reduction process|0055114||,superoxide metabolic process|0006801||;locus_tag=GGE_1743;product=Superoxide dismutase Mn;protein_id=EGT80235.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77498 78125 . + . ID=id-GGE_1743;Dbxref=InterPro:IPR001189,PIR:PIRSF000349;Note=superoxide dismutase%2C mn/fe specific~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77498 78119 . + . ID=id-GGE_1743-2;Note=multi-dom%3B label: PRK10925;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77498 78116 . + . ID=id-GGE_1743-3;Dbxref=InterPro:IPR001189;Note=HMMPanther:PTHR11404:SF9~superoxide dismutase [mn]~HMMPanther:PTHR11404~family not named~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77498 77774 . + . ID=id-GGE_1743-4;Dbxref=InterPro:IPR019831;Note=superfamily:SSF46609~fe%2Cmn superoxide dismutase (sod) domain~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77504 77768 . + . ID=id-GGE_1743-5;Note=superfamily%3B label: Sod_Fe_N superfamily;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77504 77765 . + . ID=id-GGE_1743-6;Dbxref=InterPro:IPR019831,PFAM:PF00081;Note=sod_fe_n~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77516 77534 . + . ID=id-GGE_1743-7;Dbxref=InterPro:IPR001189;Note=FPrintScan:PR01703~mnsodismtase~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77780 77849 . + . ID=id-GGE_1743-8;Dbxref=InterPro:IPR019832;Note=superfamily:SSF54719~fe%2Cmn superoxide dismutase (sod) domain~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77789 77822 . + . ID=id-GGE_1743-9;Dbxref=InterPro:IPR019832,PFAM:PF02777;Note=sod_fe_c~manganese/iron superoxide dismutase;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77792 77816 . + . ID=id-GGE_1743-10;Note=superfamily%3B label: Sod_Fe_C superfamily;gbkey=misc_feature;gene=sodA;locus_tag=GGE_1743 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77522 78008 . - . ID=id-AFQR01000033.1:77522..78008;Dbxref=InterPro:IPR019833;Note=PatternScan:PS00088~sod_mn~manganese/iron superoxide dismutase%2C binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77525 77873 . - . ID=id-AFQR01000033.1:77525..77873;Dbxref=InterPro:IPR001189;Note=FPrintScan:PR01703~mnsodismtase~manganese/iron superoxide dismutase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77531 77837 . - . ID=id-AFQR01000033.1:77531..77837;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77537 78002 . - . ID=id-AFQR01000033.1:77537..78002;Dbxref=InterPro:IPR001189;Note=FPrintScan:PR01703~mnsodismtase~manganese/iron superoxide dismutase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77540 77720 . - . ID=id-AFQR01000033.1:77540..77720;Dbxref=InterPro:IPR001189;Note=FPrintScan:PR01703~mnsodismtase~manganese/iron superoxide dismutase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 77540 77579 . - . ID=id-AFQR01000033.1:77540..77579;Dbxref=InterPro:IPR001189;Note=FPrintScan:PR01703~mnsodismtase~manganese/iron superoxide dismutase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78223 78232 . - . ID=id-AFQR01000033.1:78223..78232;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 78246 79196 . - . ID=gene-GGE_1744;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank CDS 78246 79196 . - 0 ID=cds-EGT80236.1;Parent=gene-GGE_1744;Dbxref=GeneID:1169185,InterPro:IPR001216,InterPro:IPR001926,InterPro:IPR005856,InterPro:IPR005859,PFAM:PF00291,TIGRFAM:TIGR01136,TIGRFAM:TIGR01139,NCBI_GP:EGT80236.1;Name=EGT80236.1;Ontology_term=GO:0006535,GO:0008152,GO:0003824,GO:0004124,GO:0030170;gbkey=CDS;gene=cysK;go_function=catalytic activity|0003824||,cysteine synthase activity|0004124||,pyridoxal phosphate binding|0030170||;go_process=cysteine biosynthetic process from serine|0006535||,metabolic process|0008152||;locus_tag=GGE_1744;product=Cysteine synthase;protein_id=EGT80236.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78252 79176 . - . ID=id-GGE_1744;Dbxref=InterPro:IPR001926;Note=superfamily:SSF53686~tryptophan synthase beta subunit-like plp-dependent enzyme~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78255 79185 . - . ID=id-GGE_1744-2;Note=HMMPanther:PTHR10314:SF8~cysteine synthase~HMMPanther:PTHR10314~ser/thr dehydratase%2C trp synthase;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78267 79161 . - . ID=id-GGE_1744-3;Dbxref=InterPro:IPR005856,InterPro:IPR005859,TIGRFAM:TIGR01136,TIGRFAM:TIGR01139;Note=multi-dom~cyskm: cysteine synthases~cysteine synthase k/m~cysk: cysteine synthase a~cysteine synthase a%3B label: cysKM;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78273 79119 . - . ID=id-GGE_1744-4;Dbxref=InterPro:IPR001926,PFAM:PF00291;Note=palp~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78282 79134 . - . ID=id-GGE_1744-5;Note=specific~superfamily%3B label: CBS_like;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78354 78540 . - . ID=id-GGE_1744-6;Note=Gene3D:3.40.50.1100;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78648 78783 . - . ID=id-GGE_1744-7;Note=Gene3D:3.40.50.1100;gbkey=misc_feature;gene=cysK;locus_tag=GGE_1744 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78300 79047 . + . ID=id-AFQR01000033.1:78300..79047;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78303 78339 . + . ID=id-AFQR01000033.1:78303..78339;Dbxref=InterPro:IPR001216;Note=PatternScan:PS00901~cys_synthase~cysteine synthase/cystathionine beta-synthase p-phosphate-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 78318 78735 . + . ID=id-AFQR01000033.1:78318..78735;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79243 79252 . - . ID=id-AFQR01000033.1:79243..79252;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 79296 80114 . - . ID=gene-GGE_1745;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=GGE_1745 GCA_000222085.2|AFQR01000033.1 Genbank CDS 79296 80114 . - 0 ID=cds-EGT80237.1;Parent=gene-GGE_1745;Dbxref=GeneID:166221139,InterPro:IPR007496,InterPro:IPR022985,PFAM:PF04401,NCBI_GP:EGT80237.1;Name=EGT80237.1;Ontology_term=GO:0019344,GO:0009276,GO:0016021;gbkey=CDS;gene=cysZ;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_process=cysteine biosynthetic process|0019344||;locus_tag=GGE_1745;product=Protein CysZ;protein_id=EGT80237.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79296 80049 . - . ID=id-GGE_1745;Note=superfamily%3B label: DUF540 superfamily;gbkey=misc_feature;gene=cysZ;locus_tag=GGE_1745 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79311 80034 . - . ID=id-GGE_1745-2;Dbxref=InterPro:IPR022985;Note=HAMAP:MF_00468~cysz~uncharacterised protein family cysz%2C gammaproteobacteria;gbkey=misc_feature;gene=cysZ;locus_tag=GGE_1745 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79461 79851 . - . ID=id-GGE_1745-3;Dbxref=InterPro:IPR007496,PFAM:PF04401;Note=duf540~uncharacterised protein family cysz;gbkey=misc_feature;gene=cysZ;locus_tag=GGE_1745 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79365 79950 . + . ID=id-AFQR01000033.1:79365..79950;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79365 79494 . + . ID=id-AFQR01000033.1:79365..79494;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79365 79383 . + . ID=id-AFQR01000033.1:79365..79383;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79380 79497 . + . ID=id-AFQR01000033.1:79380..79497;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 79392 79740 . + . ID=id-AFQR01000033.1:79392..79740;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 80267 81253 . + . ID=gene-GGE_1746;Name=GGE_1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1746 GCA_000222085.2|AFQR01000033.1 Genbank CDS 80267 81253 . + 0 ID=cds-EGT80238.1;Parent=gene-GGE_1746;Dbxref=GeneID:229843860,InterPro:IPR007449,InterPro:IPR011919,PFAM:PF04354,TIGRFAM:TIGR02205,NCBI_GP:EGT80238.1;Name=EGT80238.1;Note=ZP_04464001;Ontology_term=GO:0000917,GO:0007049,GO:0009276,GO:0016021;gbkey=CDS;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_process=barrier septum formation|0000917||,cell cycle|0007049||;locus_tag=GGE_1746;product=cell division protein ZipA;protein_id=EGT80238.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80267 81251 . + . ID=id-GGE_1746;Dbxref=InterPro:IPR011919;Note=multi-dom~HAMAP:MF_00509~zipa~cell division protein zipa%3B label: PRK01741;gbkey=misc_feature;locus_tag=GGE_1746 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80273 81248 . + . ID=id-GGE_1746-2;Dbxref=InterPro:IPR011919,TIGRFAM:TIGR02205;Note=septum_zipa: cell division protein zipa~cell division protein zipa;gbkey=misc_feature;locus_tag=GGE_1746 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80282 80327 . + . ID=id-GGE_1746-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1746 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80285 80312 . + . ID=id-GGE_1746-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_1746 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80306 80828 . - . ID=id-AFQR01000033.1:80306..80828;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80603 80906 . - . ID=id-AFQR01000033.1:80603..80906;Dbxref=InterPro:IPR007449;Note=BlastProDom:PD035754~q4qli9_haei8_q4qli9~zipa ftsz-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80651 80870 . - . ID=id-AFQR01000033.1:80651..80870;Dbxref=InterPro:IPR007449,PFAM:PF04354;Note=zipa_c~zipa ftsz-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80654 80867 . - . ID=id-AFQR01000033.1:80654..80867;Note=superfamily%3B label: ZipA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80657 80864 . - . ID=id-AFQR01000033.1:80657..80864;Dbxref=InterPro:IPR007449;Note=Gene3D:3.30.1400.10~zipa ftsz-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 80663 80858 . - . ID=id-AFQR01000033.1:80663..80858;Dbxref=InterPro:IPR007449;Note=superfamily:SSF64383~cell-division protein zipa domain~zipa ftsz-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81270 81279 . - . ID=id-AFQR01000033.1:81270..81279;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81333 81342 . + . ID=id-AFQR01000033.1:81333..81342;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 81364 83388 . + . ID=gene-GGE_1747;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank CDS 81364 83388 . + 0 ID=cds-EGT80239.1;Parent=gene-GGE_1747;Dbxref=GeneID:166214918,InterPro:IPR000445,InterPro:IPR001357,InterPro:IPR001679,InterPro:IPR004149,InterPro:IPR004150,InterPro:IPR010994,InterPro:IPR012340,InterPro:IPR013839,InterPro:IPR016027,InterPro:IPR018239,PFAM:PF00533,PFAM:PF00633,PFAM:PF01653,PFAM:PF03119,PFAM:PF03120,PIR:PIRSF001604,TIGRFAM:TIGR00575,NCBI_GP:EGT80239.1;Name=EGT80239.1;Ontology_term=GO:0006281,GO:0006260,GO:0005622,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,DNA ligase (NAD+) activity|0003911||;go_process=DNA repair|0006281||,DNA replication|0006260||;locus_tag=GGE_1747;product=DNA ligase;protein_id=EGT80239.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81364 83386 . + . ID=id-GGE_1747;Dbxref=InterPro:IPR001679,PIR:PIRSF001604;Note=dna ligase (nad)%2C liga type~nad-dependent dna ligase;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81364 82321 . + . ID=id-GGE_1747-2;Note=superfamily:SSF56091~dna ligase/mrna capping enzyme%2C catalytic domain;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81373 83371 . + . ID=id-GGE_1747-3;Note=multi-dom%3B label: ligA;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81373 83362 . + . ID=id-GGE_1747-4;Note=HMMPanther:PTHR11107:SF5~dna ligase%2C nad-dependent~HMMPanther:PTHR11107~family not named;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81373 81547 . + . ID=id-GGE_1747-5;Note=Gene3D:1.10.287.610;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81373 81430 . + . ID=id-GGE_1747-6;Note=coiled-coil;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81376 83365 . + . ID=id-GGE_1747-7;Dbxref=InterPro:IPR001679;Note=HAMAP:MF_01588~dna_ligase_a~nad-dependent dna ligase;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81379 82315 . + . ID=id-GGE_1747-8;Dbxref=InterPro:IPR013839,PFAM:PF01653;Note=dna_ligase_aden~nad-dependent dna ligase%2C adenylation;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81388 82303 . + . ID=id-GGE_1747-9;Note=specific~superfamily%3B label: LIGANc;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81403 83326 . + . ID=id-GGE_1747-10;Dbxref=InterPro:IPR001679,TIGRFAM:TIGR00575;Note=dnlj: dna ligase%2C nad-dependent~nad-dependent dna ligase;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81730 81766 . + . ID=id-GGE_1747-11;Note=Gene3D:3.30.470.30;gbkey=misc_feature;gene=ligA;locus_tag=GGE_1747 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81400 82978 . - . ID=id-AFQR01000033.1:81400..82978;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81412 82783 . - . ID=id-AFQR01000033.1:81412..82783;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81412 82366 . - . ID=id-AFQR01000033.1:81412..82366;Dbxref=InterPro:IPR018239;Note=PatternScan:PS01056~dna_ligase_n2~nad-dependent dna ligase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81430 82843 . - . ID=id-AFQR01000033.1:81430..82843;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81448 82975 . - . ID=id-AFQR01000033.1:81448..82975;Dbxref=InterPro:IPR000445,PFAM:PF00633;Note=hhh~helix-hairpin-helix motif;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81448 82594 . - . ID=id-AFQR01000033.1:81448..82594;Dbxref=InterPro:IPR004149,PFAM:PF03119;Note=superfamily~dna_ligase_zbd~zinc-finger%2C nad-dependent dna ligase c4-type%3B label: DNA_ligase_ZBD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81454 81718 . - . ID=id-AFQR01000033.1:81454..81718;Dbxref=InterPro:IPR018239;Note=PatternScan:PS01055~dna_ligase_n1~nad-dependent dna ligase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81568 83167 . - . ID=id-AFQR01000033.1:81568..83167;Note=specific~superfamily%3B label: BRCT;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81568 82678 . - . ID=id-AFQR01000033.1:81568..82678;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81577 82333 . - . ID=id-AFQR01000033.1:81577..82333;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81583 83152 . - . ID=id-AFQR01000033.1:81583..83152;Dbxref=InterPro:IPR001357,PFAM:PF00533;Note=brct~brct;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81592 83149 . - . ID=id-AFQR01000033.1:81592..83149;Note=Gene3D:3.40.50.10190;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81604 83140 . - . ID=id-AFQR01000033.1:81604..83140;Dbxref=InterPro:IPR001357;Note=superfamily:SSF52113~brct domain~brct;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81604 82336 . - . ID=id-AFQR01000033.1:81604..82336;Dbxref=InterPro:IPR004150,PFAM:PF03120;Note=dna_ligase_ob~nad-dependent dna ligase%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81607 83146 . - . ID=id-AFQR01000033.1:81607..83146;Dbxref=InterPro:IPR001357;Note=ProfileScan:PS50172~brct~brct;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81607 82885 . - . ID=id-AFQR01000033.1:81607..82885;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81610 82333 . - . ID=id-AFQR01000033.1:81610..82333;Note=superfamily%3B label: DNA_ligase_OB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81622 82324 . - . ID=id-AFQR01000033.1:81622..82324;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 81916 82582 . - . ID=id-AFQR01000033.1:81916..82582;Dbxref=InterPro:IPR010994;Note=superfamily:SSF47781~ruva domain 2-like~ruva domain 2-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 84117 84410 . - . ID=gene-GGE_1748;Name=GGE_1748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank CDS 84117 84410 . - 0 ID=cds-EGT80240.1;Parent=gene-GGE_1748;Dbxref=GeneID:251792132,InterPro:IPR000640,InterPro:IPR019199,InterPro:IPR021127,PFAM:PF09827,TIGRFAM:TIGR01573,NCBI_GP:EGT80240.1;Name=EGT80240.1;Note=YP_003006852;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||;locus_tag=GGE_1748;product=CRISPR-associated protein Cas2;protein_id=EGT80240.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84117 84408 . - . ID=id-GGE_1748;Dbxref=InterPro:IPR021127,TIGRFAM:TIGR01573;Note=cas2: crispr-associated endoribonuclease cas~crispr associated protein cas2;gbkey=misc_feature;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84117 84372 . - . ID=id-GGE_1748-2;Note=superfamily:SSF143430~ttp0101/sso1404-like;gbkey=misc_feature;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84117 84360 . - . ID=id-GGE_1748-3;Dbxref=InterPro:IPR019199,PFAM:PF09827;Note=crispr_cas2~virulence-associated protein d / crispr associated protein cas2;gbkey=misc_feature;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84117 84330 . - . ID=id-GGE_1748-4;Dbxref=InterPro:IPR000640;Note=Gene3D:3.30.70.240~translation elongation factor efg/ef2;gbkey=misc_feature;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84126 84369 . - . ID=id-GGE_1748-5;Note=specific~superfamily%3B label: Cas2_I_II_III;gbkey=misc_feature;locus_tag=GGE_1748 GCA_000222085.2|AFQR01000033.1 Genbank gene 84414 85427 . - . ID=gene-GGE_1749;Name=GGE_1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank CDS 84414 85427 . - 0 ID=cds-EGT80241.1;Parent=gene-GGE_1749;Dbxref=GeneID:319638002,InterPro:IPR002729,InterPro:IPR019856,PFAM:PF01867,TIGRFAM:TIGR00287,TIGRFAM:TIGR03640,NCBI_GP:EGT80241.1;Name=EGT80241.1;Note=ZP_07992766;gbkey=CDS;locus_tag=GGE_1749;product=putative cRISPR-associated protein Cas1%2C DVULG subtype;protein_id=EGT80241.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84423 85416 . - . ID=id-GGE_1749;Dbxref=InterPro:IPR019856,TIGRFAM:TIGR03640;Note=cas1_dvulg: crispr-associated endonuclease~crispr-associated protein cas1%2C dvulg subtype;gbkey=misc_feature;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84426 85410 . - . ID=id-GGE_1749-2;Note=specific~superfamily%3B label: Cas1_I-C;gbkey=misc_feature;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84435 85392 . - . ID=id-GGE_1749-3;Dbxref=InterPro:IPR002729,TIGRFAM:TIGR00287;Note=cas1: crispr-associated endonuclease cas1~crispr-associated protein cas1;gbkey=misc_feature;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 84435 85377 . - . ID=id-GGE_1749-4;Dbxref=InterPro:IPR002729,PFAM:PF01867;Note=cas_cas1~crispr-associated protein cas1;gbkey=misc_feature;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 85014 85023 . - . ID=id-GGE_1749-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1749 GCA_000222085.2|AFQR01000033.1 Genbank gene 87476 88159 . - . ID=gene-GGE_1750;Name=GGE_1750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1750 GCA_000222085.2|AFQR01000033.1 Genbank CDS 87476 88159 . - 0 ID=cds-EGT80242.1;Parent=gene-GGE_1750;Dbxref=GeneID:255066896,InterPro:IPR013343,InterPro:IPR022765,PFAM:PF01930,TIGRFAM:TIGR00372,NCBI_GP:EGT80242.1;Name=EGT80242.1;Note=ZP_05318751;gbkey=CDS;locus_tag=GGE_1750;product=CRISPR-associated protein Cas4;protein_id=EGT80242.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 87530 88016 . - . ID=id-GGE_1750;Dbxref=InterPro:IPR013343,TIGRFAM:TIGR00372;Note=cas4: crispr-associated protein cas4~crispr-associated protein cas4;gbkey=misc_feature;locus_tag=GGE_1750 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 87530 88013 . - . ID=id-GGE_1750-2;Note=specific~superfamily%3B label: cas4_I-A_I-B_I-C_I-D_II-B;gbkey=misc_feature;locus_tag=GGE_1750 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 87539 88004 . - . ID=id-GGE_1750-3;Dbxref=InterPro:IPR022765,PFAM:PF01930;Note=cas_cas4~dna2/cas4%2C domain of unknown function duf83;gbkey=misc_feature;locus_tag=GGE_1750 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88146 88155 . + . ID=id-AFQR01000033.1:88146..88155;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 88175 88822 . - . ID=gene-GGE_1751;Name=GGE_1751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1751 GCA_000222085.2|AFQR01000033.1 Genbank CDS 88175 88822 . - 0 ID=cds-EGT80243.1;Parent=gene-GGE_1751;Dbxref=InterPro:IPR006482,InterPro:IPR013418,PFAM:PF05107,TIGRFAM:TIGR01595,TIGRFAM:TIGR02589,NCBI_GP:EGT80243.1;Name=EGT80243.1;Note=Hypothetical cRISPR-associated protein Csd2;gbkey=CDS;locus_tag=GGE_1751;product=putative cRISPR-associated protein Csd2;protein_id=EGT80243.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88175 88817 . - . ID=id-GGE_1751;Dbxref=InterPro:IPR013418,TIGRFAM:TIGR02589;Note=superfamily~cas_csd2: crispr-associated protein%2C csd2~crispr-associated protein csd2%3B label: Cas7_I-C superfamily;gbkey=misc_feature;locus_tag=GGE_1751 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88187 88772 . - . ID=id-GGE_1751-2;Dbxref=InterPro:IPR006482,TIGRFAM:TIGR01595;Note=cas_ct1132: crispr-associated protein%2C ct1~crispr-associated protein tm1801;gbkey=misc_feature;locus_tag=GGE_1751 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88190 88760 . - . ID=id-GGE_1751-3;Dbxref=InterPro:IPR006482,PFAM:PF05107;Note=duf694~crispr-associated protein tm1801;gbkey=misc_feature;locus_tag=GGE_1751 GCA_000222085.2|AFQR01000033.1 Genbank gene 88816 89040 . - . ID=gene-GGE_1752;Name=GGE_1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1752 GCA_000222085.2|AFQR01000033.1 Genbank CDS 88816 89040 . - 0 ID=cds-EGT80244.1;Parent=gene-GGE_1752;Dbxref=InterPro:IPR006482,PFAM:PF05107,NCBI_GP:EGT80244.1;Name=EGT80244.1;Note=Hypothetical cRISPR-associated protein;gbkey=CDS;locus_tag=GGE_1752;product=putative cRISPR-associated protein;protein_id=EGT80244.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88828 89026 . - . ID=id-GGE_1752;Dbxref=InterPro:IPR006482,PFAM:PF05107;Note=duf694~crispr-associated protein tm1801;gbkey=misc_feature;locus_tag=GGE_1752 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88837 89017 . - . ID=id-GGE_1752-2;Note=superfamily%3B label: Cas7_I-C superfamily;gbkey=misc_feature;locus_tag=GGE_1752 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 88852 88870 . + . ID=id-AFQR01000033.1:88852..88870;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 89052 90830 . - . ID=gene-GGE_1753;Name=GGE_1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank CDS 89052 90830 . - 0 ID=cds-EGT80245.1;Parent=gene-GGE_1753;Dbxref=GeneID:241760068,InterPro:IPR010144,PFAM:PF09709,TIGRFAM:TIGR01863,NCBI_GP:EGT80245.1;Name=EGT80245.1;Note=ZP_04758166;gbkey=CDS;locus_tag=GGE_1753;product=CRISPR-associated protein%2C Csd1 family;protein_id=EGT80245.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89061 90810 . - . ID=id-GGE_1753;Dbxref=InterPro:IPR010144,TIGRFAM:TIGR01863;Note=cas_csd1: crispr-associated protein%2C csd1 fa~crispr-associated protein%2C csd1-type;gbkey=misc_feature;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89061 89091 . - . ID=id-GGE_1753-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89070 90780 . - . ID=id-GGE_1753-3;Dbxref=InterPro:IPR010144,PFAM:PF09709;Note=cas_csd1~crispr-associated protein%2C csd1-type;gbkey=misc_feature;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89115 90738 . - . ID=id-GGE_1753-4;Note=specific~superfamily%3B label: Cas8c_I-C;gbkey=misc_feature;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89121 90744 . - . ID=id-GGE_1753-5;Note=multi-dom%3B label: cas_Csd1;gbkey=misc_feature;locus_tag=GGE_1753 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89085 89703 . + . ID=id-AFQR01000033.1:89085..89703;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89088 89331 . + . ID=id-AFQR01000033.1:89088..89331;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 89091 89895 . + . ID=id-AFQR01000033.1:89091..89895;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 90827 91543 . - . ID=gene-GGE_1754;Name=GGE_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1754 GCA_000222085.2|AFQR01000033.1 Genbank CDS 90827 91543 . - 0 ID=cds-EGT80246.1;Parent=gene-GGE_1754;Dbxref=GeneID:269215093,InterPro:IPR010155,InterPro:IPR013422,InterPro:IPR021124,PFAM:PF09704,PIR:PIRSF029950,TIGRFAM:TIGR01876,TIGRFAM:TIGR02593,NCBI_GP:EGT80246.1;Name=EGT80246.1;Note=ZP_06159033;gbkey=CDS;locus_tag=GGE_1754;product=CRISPR-associated protein Cas5%2C Dvulg subtype;protein_id=EGT80246.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 90860 91511 . - . ID=id-GGE_1754;Dbxref=InterPro:IPR010155,PIR:PIRSF029950;Note=crispr-associated protein~crispr-associated protein%2C cas5d-type;gbkey=misc_feature;locus_tag=GGE_1754 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 90878 90956 . - . ID=id-GGE_1754-2;Dbxref=InterPro:IPR013422,TIGRFAM:TIGR02593;Note=crispr_cas5: crispr-associated protein ca~crispr-associated protein cas5;gbkey=misc_feature;locus_tag=GGE_1754 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 90881 91463 . - . ID=id-GGE_1754-3;Dbxref=InterPro:IPR021124,PFAM:PF09704;Note=specific~superfamily~multi-dom~cas_cas5d~crispr-associated protein%2C cas5%3B label: cas5_I-C;gbkey=misc_feature;locus_tag=GGE_1754 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 90887 91481 . - . ID=id-GGE_1754-4;Dbxref=InterPro:IPR010155,TIGRFAM:TIGR01876;Note=cas_cas5d: crispr-associated protein cas5~crispr-associated protein%2C cas5d-type;gbkey=misc_feature;locus_tag=GGE_1754 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 91521 91530 . + . ID=id-AFQR01000033.1:91521..91530;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 91565 91574 . - . ID=id-AFQR01000033.1:91565..91574;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 92220 92244 . + . ID=id-AFQR01000033.1:92220..92244;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 92289 92832 . - . ID=id-AFQR01000033.1:92289..92832;Note=superfamily%3B label: SIR2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 93075 93572 . - . ID=gene-GGE_1755;Name=GGE_1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1755 GCA_000222085.2|AFQR01000033.1 Genbank CDS 93075 93572 . - 0 ID=cds-EGT80247.1;Parent=gene-GGE_1755;Dbxref=GeneID:172063457,InterPro:IPR000157,InterPro:IPR015032,PFAM:PF08937,NCBI_GP:EGT80247.1;Name=EGT80247.1;Note=YP_001811108;Ontology_term=GO:0045087,GO:0007165,GO:0031224,GO:0004888;gbkey=CDS;go_component=intrinsic to membrane|0031224||;go_function=transmembrane receptor activity|0004888||;go_process=innate immune response|0045087||,signal transduction|0007165||;locus_tag=GGE_1755;product=putative toll-Interleukin receptor;protein_id=EGT80247.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93159 93402 . - . ID=id-GGE_1755;Dbxref=InterPro:IPR000157;Note=superfamily:SSF52200~toll/interleukin receptor tir domain~toll-interleukin receptor;gbkey=misc_feature;locus_tag=GGE_1755 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93186 93333 . - . ID=id-GGE_1755-2;Note=Gene3D:3.40.50.10140;gbkey=misc_feature;locus_tag=GGE_1755 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93201 93420 . - . ID=id-GGE_1755-3;Note=superfamily%3B label: DUF1863 superfamily;gbkey=misc_feature;locus_tag=GGE_1755 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93201 93309 . - . ID=id-GGE_1755-4;Dbxref=InterPro:IPR015032,PFAM:PF08937;Note=duf1863~mth538 tir-like domain;gbkey=misc_feature;locus_tag=GGE_1755 GCA_000222085.2|AFQR01000033.1 Genbank gene 93583 94200 . - . ID=gene-GGE_1756;Name=GGE_1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1756 GCA_000222085.2|AFQR01000033.1 Genbank CDS 93583 94200 . - 0 ID=cds-EGT80248.1;Parent=gene-GGE_1756;Dbxref=GeneID:53729073,InterPro:IPR015032,PFAM:PF08937,NCBI_GP:EGT80248.1;Name=EGT80248.1;Note=ZP_00348311;gbkey=CDS;locus_tag=GGE_1756;product=Hypothetical protein;protein_id=EGT80248.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93592 94003 . - . ID=id-GGE_1756;Note=superfamily%3B label: DUF1863 superfamily;gbkey=misc_feature;locus_tag=GGE_1756 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93592 94000 . - . ID=id-GGE_1756-2;Dbxref=InterPro:IPR015032,PFAM:PF08937;Note=duf1863~mth538 tir-like domain;gbkey=misc_feature;locus_tag=GGE_1756 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93598 93946 . - . ID=id-GGE_1756-3;Note=Gene3D:3.40.50.10140;gbkey=misc_feature;locus_tag=GGE_1756 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 93622 93901 . + . ID=id-AFQR01000033.1:93622..93901;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 94533 95294 . - . ID=gene-GGE_1757;Name=GGE_1757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank CDS 94533 95294 . - 0 ID=cds-EGT80249.1;Parent=gene-GGE_1757;Dbxref=NCBI_GP:EGT80249.1;Name=EGT80249.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase-like protein;gbkey=CDS;locus_tag=GGE_1757;product=putative p-loop containing nucleoside triphosphate hydrolase-like protein;protein_id=EGT80249.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94533 95274 . - . ID=id-GGE_1757;Note=specific~superfamily%3B label: cas3''_Type_I;gbkey=misc_feature;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94533 95064 . - . ID=id-GGE_1757-2;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94560 95109 . - . ID=id-GGE_1757-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94617 95262 . - . ID=id-GGE_1757-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94773 94827 . - . ID=id-GGE_1757-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1757 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 94827 94983 . + . ID=id-AFQR01000033.1:94827..94983;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 95119 95128 . + . ID=id-AFQR01000033.1:95119..95128;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 95624 95681 . + . ID=id-AFQR01000033.1:95624..95681;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 95648 96023 . + . ID=id-AFQR01000033.1:95648..96023;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 95723 96113 . - . ID=id-AFQR01000033.1:95723..96113;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 96596 98128 . - . ID=gene-GGE_1758;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank CDS 96596 98128 . - 0 ID=cds-EGT80250.1;Parent=gene-GGE_1758;Dbxref=GeneID:1169524,InterPro:IPR001411,InterPro:IPR004638,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00711,NCBI_GP:EGT80250.1;Name=EGT80250.1;Ontology_term=GO:0046677,GO:0015904,GO:0055085,GO:0006810,GO:0016021,GO:0015520;gbkey=CDS;gene=emrB;go_component=integral to membrane|0016021||;go_function=tetracycline:hydrogen antiporter activity|0015520||;go_process=response to antibiotic|0046677||,tetracycline transport|0015904||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1758;product=Multidrug resistance protein B;protein_id=EGT80250.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96596 98126 . - . ID=id-GGE_1758;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96635 96656 . - . ID=id-GGE_1758-2;Note=transmembrane_regions;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96644 97811 . - . ID=id-GGE_1758-3;Note=HMMPanther:PTHR24003:SF57~subfamily not named~HMMPanther:PTHR24003~family not named;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96647 98054 . - . ID=id-GGE_1758-4;Dbxref=InterPro:IPR004638,TIGRFAM:TIGR00711;Note=efflux_emrb: drug resistance mfs transpor~drug resistance transporter emrb/qaca subfamily;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96653 98063 . - . ID=id-GGE_1758-5;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96653 97139 . - . ID=id-GGE_1758-6;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96662 96671 . - . ID=id-GGE_1758-7;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97781 . - . ID=id-GGE_1758-8;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96680 98021 . - . ID=id-GGE_1758-9;Note=multi-dom%3B label: efflux_EmrB;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96680 97094 . - . ID=id-GGE_1758-10;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;gene=emrB;locus_tag=GGE_1758 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96635 96641 . + . ID=id-AFQR01000033.1:96635..96641;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96647 97220 . + . ID=id-AFQR01000033.1:96647..97220;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96650 97310 . + . ID=id-AFQR01000033.1:96650..97310;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96650 97220 . + . ID=id-AFQR01000033.1:96650..97220;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96653 97223 . + . ID=id-AFQR01000033.1:96653..97223;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96656 97103 . + . ID=id-AFQR01000033.1:96656..97103;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96659 96935 . + . ID=id-AFQR01000033.1:96659..96935;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 98033 . + . ID=id-AFQR01000033.1:96665..98033;Note=transmembrane_regions~Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97718 . + . ID=id-AFQR01000033.1:96665..97718;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97607 . + . ID=id-AFQR01000033.1:96665..97607;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97502 . + . ID=id-AFQR01000033.1:96665..97502;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97424 . + . ID=id-AFQR01000033.1:96665..97424;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 97025 . + . ID=id-AFQR01000033.1:96665..97025;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 96923 . + . ID=id-AFQR01000033.1:96665..96923;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 96845 . + . ID=id-AFQR01000033.1:96665..96845;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96665 96758 . + . ID=id-AFQR01000033.1:96665..96758;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 96671 97025 . + . ID=id-AFQR01000033.1:96671..97025;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 97058 97412 . + . ID=id-AFQR01000033.1:97058..97412;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 98138 99310 . - . ID=gene-GGE_1759;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=GGE_1759 GCA_000222085.2|AFQR01000033.1 Genbank CDS 98138 99310 . - 0 ID=cds-EGT80251.1;Parent=gene-GGE_1759;Dbxref=GeneID:1169523,InterPro:IPR005694,InterPro:IPR006143,PFAM:PF00529,TIGRFAM:TIGR00998,NCBI_GP:EGT80251.1;Name=EGT80251.1;Ontology_term=GO:0006855,GO:0009306,GO:0009276,GO:0016020,GO:0015238,GO:0008565;gbkey=CDS;gene=emrA;go_component=Gram-negative-bacterium-type cell wall|0009276||,membrane|0016020||;go_function=drug transmembrane transporter activity|0015238||,protein transporter activity|0008565||;go_process=drug transmembrane transport|0006855||,protein secretion|0009306||;locus_tag=GGE_1759;product=Multidrug resistance protein A;protein_id=EGT80251.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98180 98189 . - . ID=id-GGE_1759;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=emrA;locus_tag=GGE_1759 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98198 99116 . - . ID=id-GGE_1759-2;Dbxref=InterPro:IPR005694,TIGRFAM:TIGR00998;Note=multi-dom~8a0101: efflux pump membrane protein~efflux pump membrane protein emr%3B label: 8a0101;gbkey=misc_feature;gene=emrA;locus_tag=GGE_1759 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98279 98543 . - . ID=id-GGE_1759-3;Note=superfamily:SSF111369~hlyd-like secretion proteins;gbkey=misc_feature;gene=emrA;locus_tag=GGE_1759 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98318 98987 . - . ID=id-GGE_1759-4;Dbxref=InterPro:IPR006143,PFAM:PF00529;Note=hlyd~secretion protein hlyd;gbkey=misc_feature;gene=emrA;locus_tag=GGE_1759 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98177 98210 . + . ID=id-AFQR01000033.1:98177..98210;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98207 98207 . + . ID=id-AFQR01000033.1:98207..98207;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 98354 98726 . + . ID=id-AFQR01000033.1:98354..98726;Note=superfamily:SSF111369~hlyd-like secretion proteins;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 99494 99976 . - . ID=gene-GGE_1760;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank CDS 99494 99976 . - 0 ID=cds-EGT80252.1;Parent=gene-GGE_1760;Dbxref=GeneID:1169443,InterPro:IPR001796,InterPro:IPR012259,InterPro:IPR017925,PFAM:PF00186,NCBI_GP:EGT80252.1;Name=EGT80252.1;Ontology_term=GO:0006545,GO:0009165,GO:0055114,GO:0050661,GO:0004146;gbkey=CDS;gene=folA;go_function=NADP or NADPH binding|0050661||,dihydrofolate reductase activity|0004146||;go_process=glycine biosynthetic process|0006545||,nucleotide biosynthetic process|0009165||,oxidation-reduction process|0055114||;locus_tag=GGE_1760;product=Dihydrofolate reductase;protein_id=EGT80252.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99494 99974 . - . ID=id-GGE_1760;Note=superfamily:SSF53597~dihydrofolate reductase-like;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99494 99965 . - . ID=id-GGE_1760-2;Note=Gene3D:3.40.430.10;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99500 99968 . - . ID=id-GGE_1760-3;Dbxref=InterPro:IPR001796;Note=ProfileScan:PS51330~dhfr_2~dihydrofolate reductase domain;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99503 99968 . - . ID=id-GGE_1760-4;Dbxref=InterPro:IPR012259;Note=HMMPanther:PTHR11549:SF1~dihydrofolate reductase~dihydrofolate reductase~HMMPanther:PTHR11549~family not named;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99503 99965 . - . ID=id-GGE_1760-5;Dbxref=InterPro:IPR001796,PFAM:PF00186;Note=dhfr_1~dihydrofolate reductase domain;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99503 99959 . - . ID=id-GGE_1760-6;Note=specific~superfamily%3B label: DHFR;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99536 99563 . - . ID=id-GGE_1760-7;Dbxref=InterPro:IPR017925;Note=PatternScan:PS00075~dhfr_1~dihydrofolate reductase conserved site;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99728 99737 . - . ID=id-GGE_1760-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=folA;locus_tag=GGE_1760 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99521 99578 . + . ID=id-AFQR01000033.1:99521..99578;Dbxref=InterPro:IPR012259;Note=FPrintScan:PR00070~dhfr~dihydrofolate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99527 99536 . + . ID=id-AFQR01000033.1:99527..99536;Dbxref=InterPro:IPR012259;Note=FPrintScan:PR00070~dhfr~dihydrofolate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99530 99617 . + . ID=id-AFQR01000033.1:99530..99617;Dbxref=InterPro:IPR012259;Note=FPrintScan:PR00070~dhfr~dihydrofolate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 99539 99767 . + . ID=id-AFQR01000033.1:99539..99767;Dbxref=InterPro:IPR012259;Note=FPrintScan:PR00070~dhfr~dihydrofolate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 100078 101181 . + . ID=gene-GGE_1761;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank CDS 100078 101181 . + 0 ID=cds-EGT80253.1;Parent=gene-GGE_1761;Dbxref=GeneID:189037758,InterPro:IPR001048,InterPro:IPR001057,InterPro:IPR002478,InterPro:IPR005715,InterPro:IPR011529,InterPro:IPR015947,InterPro:IPR019797,PFAM:PF00696,PFAM:PF01472,PIR:PIRSF000729,TIGRFAM:TIGR01027,NCBI_GP:EGT80253.1;Name=EGT80253.1;Ontology_term=GO:0008652,GO:0006561,GO:0005737,GO:0003723,GO:0004349;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||;go_function=RNA binding|0003723||,glutamate 5-kinase activity|0004349||;go_process=cellular amino acid biosynthetic process|0008652||,proline biosynthetic process|0006561||;locus_tag=GGE_1761;product=Glutamate 5-kinase;protein_id=EGT80253.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100078 101179 . + . ID=id-GGE_1761;Dbxref=InterPro:IPR011529,PIR:PIRSF000729;Note=multi-dom~glutamate 5-kinase~glutamate 5-kinase%3B label: PRK05429;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100078 101176 . + . ID=id-GGE_1761-2;Note=HMMPanther:PTHR11063:SF6~subfamily not named~HMMPanther:PTHR11063~family not named;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100084 100837 . + . ID=id-GGE_1761-3;Dbxref=InterPro:IPR001048;Note=Gene3D:3.40.1160.10~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100087 100849 . + . ID=id-GGE_1761-4;Dbxref=InterPro:IPR005715;Note=HAMAP:MF_00456~prob~glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100090 101167 . + . ID=id-GGE_1761-5;Dbxref=InterPro:IPR005715,TIGRFAM:TIGR01027;Note=prob: glutamate 5-kinase~glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100090 100840 . + . ID=id-GGE_1761-6;Dbxref=InterPro:IPR001048;Note=superfamily:SSF53633~carbamate kinase-like~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100090 100768 . + . ID=id-GGE_1761-7;Dbxref=InterPro:IPR001048,PFAM:PF00696;Note=aa_kinase~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100093 100831 . + . ID=id-GGE_1761-8;Note=specific~superfamily%3B label: AAK superfamily;gbkey=misc_feature;gene=proB;locus_tag=GGE_1761 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100111 100684 . - . ID=id-AFQR01000033.1:100111..100684;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100123 100201 . - . ID=id-AFQR01000033.1:100123..100201;Dbxref=InterPro:IPR001057;Note=FPrintScan:PR00474~glu5kinase~glutamate/acetylglutamate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100132 100696 . - . ID=id-AFQR01000033.1:100132..100696;Dbxref=InterPro:IPR019797;Note=PatternScan:PS00902~glutamate_5_kinase~glutamate 5-kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100141 100702 . - . ID=id-AFQR01000033.1:100141..100702;Dbxref=InterPro:IPR001057;Note=FPrintScan:PR00474~glu5kinase~glutamate/acetylglutamate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100144 100423 . - . ID=id-AFQR01000033.1:100144..100423;Dbxref=InterPro:IPR001057;Note=FPrintScan:PR00474~glu5kinase~glutamate/acetylglutamate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100162 100519 . - . ID=id-AFQR01000033.1:100162..100519;Dbxref=InterPro:IPR001057;Note=FPrintScan:PR00474~glu5kinase~glutamate/acetylglutamate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100165 100303 . - . ID=id-AFQR01000033.1:100165..100303;Dbxref=InterPro:IPR001057;Note=FPrintScan:PR00474~glu5kinase~glutamate/acetylglutamate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100303 100906 . - . ID=id-AFQR01000033.1:100303..100906;Dbxref=InterPro:IPR002478,PFAM:PF01472;Note=superfamily~pua~pseudouridine synthase/archaeosine transglycosylase%3B label: PUA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100315 100903 . - . ID=id-AFQR01000033.1:100315..100903;Dbxref=InterPro:IPR002478;Note=ProfileScan:PS50890~pua~pseudouridine synthase/archaeosine transglycosylase;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100351 100906 . - . ID=id-AFQR01000033.1:100351..100906;Note=Gene3D:2.30.130.10;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 100357 100903 . - . ID=id-AFQR01000033.1:100357..100903;Dbxref=InterPro:IPR015947;Note=superfamily:SSF88697~pua domain-like~pseudouridine synthase/archaeosine transglycosylase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101213 101222 . - . ID=id-AFQR01000033.1:101213..101222;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank gene 101295 102083 . - . ID=gene-GGE_1762;Name=GGE_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1762 GCA_000222085.2|AFQR01000033.1 Genbank CDS 101295 102083 . - 0 ID=cds-EGT80254.1;Parent=gene-GGE_1762;Dbxref=GeneID:145636973,InterPro:IPR007730,InterPro:IPR011930,PFAM:PF05036,TIGRFAM:TIGR02223,NCBI_GP:EGT80254.1;Name=EGT80254.1;Note=ZP_01792637;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_1762;product=cell division protein;protein_id=EGT80254.1;transl_table=11 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101295 102078 . - . ID=id-GGE_1762;Dbxref=InterPro:IPR011930,TIGRFAM:TIGR02223;Note=ftsn: cell division protein ftsn~cell division protein ftsn;gbkey=misc_feature;locus_tag=GGE_1762 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101331 101364 . - . ID=id-GGE_1762-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1762 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101487 101892 . - . ID=id-GGE_1762-3;Note=multi-dom%3B label: FtsN;gbkey=misc_feature;locus_tag=GGE_1762 GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101337 101445 . + . ID=id-AFQR01000033.1:101337..101445;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101355 101367 . + . ID=id-AFQR01000033.1:101355..101367;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101409 101604 . + . ID=id-AFQR01000033.1:101409..101604;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101418 101631 . + . ID=id-AFQR01000033.1:101418..101631;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101481 101871 . + . ID=id-AFQR01000033.1:101481..101871;Dbxref=InterPro:IPR007730;Note=Gene3D:3.30.70.1070~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101487 101865 . + . ID=id-AFQR01000033.1:101487..101865;Dbxref=InterPro:IPR007730;Note=superfamily:SSF110997~sporulation related repeat~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101502 101871 . + . ID=id-AFQR01000033.1:101502..101871;Dbxref=InterPro:IPR007730,PFAM:PF05036;Note=spor~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 101505 101868 . + . ID=id-AFQR01000033.1:101505..101868;Note=superfamily%3B label: SPOR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000033.1 Genbank sequence_feature 102192 102663 . + . ID=id-GeneID:1841333-5;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature ##sequence-region AFQR01000032.1 1 14842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000032.1 Genbank region 1 14842 . + . ID=AFQR01000032.1:1..14842;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 115 124 . - . ID=id-AFQR01000032.1:115..124;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 134 1156 . - . ID=gene-GGE_1659;Name=GGE_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank CDS 134 1156 . - 0 ID=cds-EGT80256.1;Parent=gene-GGE_1659;Dbxref=GeneID:52424347,InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001834,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012675,InterPro:IPR017927,InterPro:IPR017938,PFAM:PF00111,PFAM:PF00175,PFAM:PF00970,NCBI_GP:EGT80256.1;Name=EGT80256.1;Note=YP_087484;Ontology_term=GO:0055114,GO:0009055,GO:0051536,GO:0016491;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1659;product=HCP oxidoreductase%2C NADH-dependent;protein_id=EGT80256.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 134 878 . - . ID=id-GGE_1659;Note=HMMPanther:PTHR19370:SF35~subfamily not named~HMMPanther:PTHR19370~family not named;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 134 446 . - . ID=id-GGE_1659-2;Dbxref=InterPro:IPR017938;Note=superfamily:SSF63380~riboflavin synthase domain-like~riboflavin synthase-like beta-barrel;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 146 1133 . - . ID=id-GGE_1659-3;Note=multi-dom%3B label: PRK10684;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 158 437 . - . ID=id-GGE_1659-4;Dbxref=InterPro:IPR017927;Note=ProfileScan:PS51384~fad_fr~ferredoxin reductase-type fad-binding domain;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 170 392 . - . ID=id-GGE_1659-5;Note=Gene3D:2.40.30.10;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 173 812 . - . ID=id-GGE_1659-6;Note=specific~superfamily%3B label: FNR_iron_sulfur_binding_1;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 173 416 . - . ID=id-GGE_1659-7;Dbxref=InterPro:IPR008333,PFAM:PF00970;Note=fad_binding_6~oxidoreductase%2C fad-binding domain;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 419 560 . - . ID=id-GGE_1659-8;Note=superfamily:SSF52343~ferredoxin reductase-like nadp-linked domain;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 428 539 . - . ID=id-GGE_1659-9;Note=Gene3D:3.40.50.80;gbkey=misc_feature;locus_tag=GGE_1659 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 158 302 . + . ID=id-AFQR01000032.1:158..302;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 161 998 . + . ID=id-AFQR01000032.1:161..998;Dbxref=InterPro:IPR006058;Note=PatternScan:PS00197~2fe2s_fer_1~2fe-2s ferredoxin%2C iron-sulphur binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 161 752 . + . ID=id-AFQR01000032.1:161..752;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 179 413 . + . ID=id-AFQR01000032.1:179..413;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 194 482 . + . ID=id-AFQR01000032.1:194..482;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 353 911 . + . ID=id-AFQR01000032.1:353..911;Dbxref=InterPro:IPR001041,PFAM:PF00111;Note=fer2~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 377 905 . + . ID=id-AFQR01000032.1:377..905;Note=specific~superfamily%3B label: fer2;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 404 887 . + . ID=id-AFQR01000032.1:404..887;Dbxref=InterPro:IPR001041;Note=ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 443 485 . + . ID=id-AFQR01000032.1:443..485;Dbxref=InterPro:IPR001433,PFAM:PF00175;Note=nad_binding_1~oxidoreductase fad/nad(p)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 449 833 . + . ID=id-AFQR01000032.1:449..833;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 467 818 . + . ID=id-AFQR01000032.1:467..818;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1181 1190 . + . ID=id-AFQR01000032.1:1181..1190;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1238 1247 . - . ID=id-AFQR01000032.1:1238..1247;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 1260 2912 . - . ID=gene-GGE_1660;Name=GGE_1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank CDS 1260 2912 . - 0 ID=cds-EGT80257.1;Parent=gene-GGE_1660;Dbxref=GeneID:261345679,InterPro:IPR004137,InterPro:IPR010048,InterPro:IPR011254,InterPro:IPR016099,InterPro:IPR016100,PFAM:PF03063,PIR:PIRSF000076,TIGRFAM:TIGR01703,NCBI_GP:EGT80257.1;Name=EGT80257.1;Note=ZP_05973323;Ontology_term=GO:0055114,GO:0005737,GO:0003824,GO:0051536,GO:0016661,GO:0016491;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,oxidoreductase activity acting on other nitrogenous compounds as donors|0016661||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1660;product=hydroxylamine reductase;protein_id=EGT80257.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1260 2910 . - . ID=id-GGE_1660;Dbxref=InterPro:IPR010048,PIR:PIRSF000076;Note=hydroxylamine reductase~hybrid cluster protein;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1260 2907 . - . ID=id-GGE_1660-2;Dbxref=InterPro:IPR010048,InterPro:IPR011254;Note=superfamily:SSF56821~prismane like protein~prismane-like~HAMAP:MF_00069~hydroxylam_reduct~hybrid cluster protein;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1260 2904 . - . ID=id-GGE_1660-3;Dbxref=InterPro:IPR010048,TIGRFAM:TIGR01703;Note=multi-dom~hybrid_clust: hydroxylamine reductase~hybrid cluster protein%3B label: PRK05290;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1260 2901 . - . ID=id-GGE_1660-4;Dbxref=InterPro:IPR004137,PFAM:PF03063;Note=prismane~prismane;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1260 1524 . - . ID=id-GGE_1660-5;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1359 1482 . - . ID=id-GGE_1660-6;Dbxref=InterPro:IPR016100;Note=Gene3D:1.20.1270.20~prismane%2C alpha-bundle;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1731 2436 . - . ID=id-GGE_1660-7;Note=specific~superfamily%3B label: HCP;gbkey=misc_feature;locus_tag=GGE_1660 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1395 1572 . + . ID=id-AFQR01000032.1:1395..1572;Note=superfamily%3B label: ribokinase_pfkB_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1503 1713 . + . ID=id-AFQR01000032.1:1503..1713;Dbxref=InterPro:IPR016100;Note=Gene3D:1.20.1270.20~prismane%2C alpha-bundle;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1698 1962 . + . ID=id-AFQR01000032.1:1698..1962;Dbxref=InterPro:IPR016099;Note=Gene3D:3.40.50.2030~prismane-like%2C alpha/beta-sandwich;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 1761 2400 . + . ID=id-AFQR01000032.1:1761..2400;Dbxref=InterPro:IPR016099;Note=Gene3D:3.40.50.2030~prismane-like%2C alpha/beta-sandwich;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 2484 2493 . + . ID=id-AFQR01000032.1:2484..2493;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 3275 4279 . + . ID=gene-GGE_1661;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank CDS 3275 4279 . + 0 ID=cds-EGT80258.1;Parent=gene-GGE_1661;Dbxref=GeneID:166918655,InterPro:IPR002292,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,PFAM:PF00185,PFAM:PF02729,TIGRFAM:TIGR00658,NCBI_GP:EGT80258.1;Name=EGT80258.1;Ontology_term=GO:0006520,GO:0009348,GO:0016597,GO:0016743,GO:0004585;gbkey=CDS;gene=arcB;go_component=ornithine carbamoyltransferase complex|0009348||;go_function=amino acid binding|0016597||,carboxyl- or carbamoyltransferase activity|0016743||,ornithine carbamoyltransferase activity|0004585||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_1661;product=Ornithine carbamoyltransferase;protein_id=EGT80258.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3275 4277 . + . ID=id-GGE_1661;Note=multi-dom%3B label: PRK01713;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3275 4274 . + . ID=id-GGE_1661-2;Note=HMMPanther:PTHR11405:SF1~ornithine carbamoyltransferase~HMMPanther:PTHR11405~family not named;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3281 4271 . + . ID=id-GGE_1661-3;Dbxref=InterPro:IPR006130;Note=superfamily:SSF53671~aspartate/ornithine carbamoyltransferase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3290 3695 . + . ID=id-GGE_1661-4;Note=Gene3D:3.40.50.1370;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3296 4259 . + . ID=id-GGE_1661-5;Dbxref=InterPro:IPR002292;Note=HAMAP:MF_01109~otcase~ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3299 4256 . + . ID=id-GGE_1661-6;Dbxref=InterPro:IPR002292,TIGRFAM:TIGR00658;Note=orni_carb_tr: ornithine carbamoyltransfe~ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3299 3701 . + . ID=id-GGE_1661-7;Dbxref=InterPro:IPR006132,PFAM:PF02729;Note=superfamily~otcace_n~aspartate/ornithine carbamoyltransferase%2C carbamoyl-p binding%3B label: OTCace_N superfamily;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3710 3803 . + . ID=id-GGE_1661-8;Note=Gene3D:3.40.50.1370;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3746 3800 . + . ID=id-GGE_1661-9;Dbxref=InterPro:IPR006131,PFAM:PF00185;Note=otcace~aspartate/ornithine carbamoyltransferase%2C asp/orn-binding domain;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3755 3791 . + . ID=id-GGE_1661-10;Note=superfamily%3B label: OTCace superfamily;gbkey=misc_feature;gene=arcB;locus_tag=GGE_1661 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3299 3434 . - . ID=id-AFQR01000032.1:3299..3434;Dbxref=InterPro:IPR006130;Note=PatternScan:PS00097~carbamoyltransferase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3305 4076 . - . ID=id-AFQR01000032.1:3305..4076;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3308 3962 . - . ID=id-AFQR01000032.1:3308..3962;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3311 4211 . - . ID=id-AFQR01000032.1:3311..4211;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3311 3680 . - . ID=id-AFQR01000032.1:3311..3680;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3317 3527 . - . ID=id-AFQR01000032.1:3317..3527;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3320 3647 . - . ID=id-AFQR01000032.1:3320..3647;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3320 3428 . - . ID=id-AFQR01000032.1:3320..3428;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3335 3434 . - . ID=id-AFQR01000032.1:3335..3434;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 3347 4169 . - . ID=id-AFQR01000032.1:3347..4169;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 4490 4684 . + . ID=gene-GGE_1662;Name=GGE_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1662 GCA_000222085.2|AFQR01000032.1 Genbank CDS 4490 4684 . + 0 ID=cds-EGT80259.1;Parent=gene-GGE_1662;Dbxref=GeneID:1175269,InterPro:IPR021237,PFAM:PF10940,NCBI_GP:EGT80259.1;Name=EGT80259.1;Note=HI_0592;gbkey=CDS;locus_tag=GGE_1662;product=hypothetical protein;protein_id=EGT80259.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 4565 4610 . + . ID=id-GGE_1662;Dbxref=InterPro:IPR021237,PFAM:PF10940;Note=superfamily~duf2618~protein of unknown function duf2618%3B label: DUF2618 superfamily;gbkey=misc_feature;locus_tag=GGE_1662 GCA_000222085.2|AFQR01000032.1 Genbank gene 4935 7097 . + . ID=gene-GGE_1663;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank CDS 4935 7097 . + 0 ID=cds-EGT80260.1;Parent=gene-GGE_1663;Dbxref=GeneID:1169250,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF01276,PFAM:PF03709,PFAM:PF03711,PIR:PIRSF009393,NCBI_GP:EGT80260.1;Name=EGT80260.1;Ontology_term=GO:0006520,GO:0005737,GO:0016831,GO:0003824,GO:0030170;gbkey=CDS;gene=speF;go_component=cytoplasm|0005737||;go_function=carboxy-lyase activity|0016831||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_1663;product=Ornithine decarboxylase;protein_id=EGT80260.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 4935 7092 . + . ID=id-GGE_1663;Dbxref=InterPro:IPR011193,PIR:PIRSF009393;Note=multi-dom~ornithine/lysine/arginine decarboxylase~ornithine/lysine/arginine decarboxylase%3B label: PRK13578;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 4935 5256 . + . ID=id-GGE_1663-2;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily~Gene3D:3.40.50.220;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 4947 5232 . + . ID=id-GGE_1663-3;Dbxref=InterPro:IPR005308,PFAM:PF03709;Note=superfamily~okr_dc_1_n~orn/lys/arg decarboxylase%3B label: OKR_DC_1_N superfamily;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5259 6318 . + . ID=id-GGE_1663-4;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5259 6261 . + . ID=id-GGE_1663-5;Dbxref=InterPro:IPR000310,PFAM:PF01276;Note=okr_dc_1~orn/lys/arg decarboxylase%2C major domain;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5259 5868 . + . ID=id-GGE_1663-6;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5262 5913 . + . ID=id-GGE_1663-7;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=speF;locus_tag=GGE_1663 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 4980 5982 . - . ID=id-AFQR01000032.1:4980..5982;Dbxref=InterPro:IPR000310;Note=PatternScan:PS00703~okr_dc_1~orn/lys/arg decarboxylase%2C major domain;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5130 5466 . - . ID=id-AFQR01000032.1:5130..5466;Note=HMMPanther:PTHR11751:SF131~uncharacterized protein yaao~HMMPanther:PTHR11751~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5313 6714 . - . ID=id-AFQR01000032.1:5313..6714;Dbxref=InterPro:IPR008286;Note=Gene3D:3.90.100.10~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5331 6660 . - . ID=id-AFQR01000032.1:5331..6660;Dbxref=InterPro:IPR008286,PFAM:PF03711;Note=okr_dc_1_c~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5337 6660 . - . ID=id-AFQR01000032.1:5337..6660;Note=superfamily%3B label: OKR_DC_1_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5385 6642 . - . ID=id-AFQR01000032.1:5385..6642;Dbxref=InterPro:IPR008286;Note=superfamily:SSF55904~ornithine decarboxylase c-terminal domain~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 5454 6195 . - . ID=id-AFQR01000032.1:5454..6195;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7149 7158 . + . ID=id-AFQR01000032.1:7149..7158;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 7204 8523 . + . ID=gene-GGE_1664;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank CDS 7204 8523 . + 0 ID=cds-EGT80261.1;Parent=gene-GGE_1664;Dbxref=GeneID:1172565,InterPro:IPR002293,InterPro:IPR004754,InterPro:IPR004841,PFAM:PF00324,PIR:PIRSF006060,TIGRFAM:TIGR00905,NCBI_GP:EGT80261.1;Name=EGT80261.1;Ontology_term=GO:0006865,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0015171;gbkey=CDS;gene=potE;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=amino acid transmembrane transporter activity|0015171||;go_process=amino acid transport|0006865||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1664;product=Putrescine-ornithine antiporter;protein_id=EGT80261.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7204 8521 . + . ID=id-GGE_1664;Dbxref=InterPro:IPR002293,PIR:PIRSF006060;Note=amino acid transporter~amino acid/polyamine transporter i;gbkey=misc_feature;gene=potE;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7204 8518 . + . ID=id-GGE_1664-2;Dbxref=InterPro:IPR004754,TIGRFAM:TIGR00905;Note=superfamily~multi-dom~2a0302: transporter%2C basic amino acid/polyam~amino acid antiporter%3B label: Aa_trans superfamily;gbkey=misc_feature;gene=potE;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7210 8473 . + . ID=id-GGE_1664-3;Dbxref=InterPro:IPR002293;Note=HMMPanther:PTHR11785:SF107~subfamily not named~HMMPanther:PTHR11785~family not named~amino acid/polyamine transporter i;gbkey=misc_feature;gene=potE;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7231 7273 . + . ID=id-GGE_1664-4;Note=transmembrane_regions;gbkey=misc_feature;gene=potE;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7255 8368 . + . ID=id-GGE_1664-5;Dbxref=InterPro:IPR004841,PFAM:PF00324;Note=aa_permease~amino acid permease domain;gbkey=misc_feature;gene=potE;locus_tag=GGE_1664 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7240 7390 . - . ID=id-AFQR01000032.1:7240..7390;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7249 7663 . - . ID=id-AFQR01000032.1:7249..7663;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7258 8365 . - . ID=id-AFQR01000032.1:7258..8365;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 8431 . - . ID=id-AFQR01000032.1:7273..8431;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 8260 . - . ID=id-AFQR01000032.1:7273..8260;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 8164 . - . ID=id-AFQR01000032.1:7273..8164;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 8017 . - . ID=id-AFQR01000032.1:7273..8017;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7882 . - . ID=id-AFQR01000032.1:7273..7882;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7753 . - . ID=id-AFQR01000032.1:7273..7753;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7642 . - . ID=id-AFQR01000032.1:7273..7642;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7555 . - . ID=id-AFQR01000032.1:7273..7555;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7459 . - . ID=id-AFQR01000032.1:7273..7459;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 7273 7312 . - . ID=id-AFQR01000032.1:7273..7312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 8625 8825 . - . ID=gene-GGE_1665;Name=GGE_1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1665 GCA_000222085.2|AFQR01000032.1 Genbank CDS 8625 8825 . - 0 ID=cds-EGT80262.1;Parent=gene-GGE_1665;Dbxref=GeneID:301169305,InterPro:IPR007359,PFAM:PF04246,NCBI_GP:EGT80262.1;Name=EGT80262.1;Note=CBW28903;gbkey=CDS;locus_tag=GGE_1665;product=putative positive regulator of the sigmaE transcription factor;protein_id=EGT80262.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8673 8778 . - . ID=id-GGE_1665;Note=superfamily%3B label: RseC_MucC superfamily;gbkey=misc_feature;locus_tag=GGE_1665 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8673 8775 . - . ID=id-GGE_1665-2;Dbxref=InterPro:IPR007359,PFAM:PF04246;Note=rsec_mucc~positive regulator of sigma(e)%2C rsec/mucc;gbkey=misc_feature;locus_tag=GGE_1665 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8679 8706 . + . ID=id-AFQR01000032.1:8679..8706;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8707 8716 . + . ID=id-AFQR01000032.1:8707..8716;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 8948 9652 . + . ID=gene-GGE_1666;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank CDS 8948 9652 . + 0 ID=cds-EGT80263.1;Parent=gene-GGE_1666;Dbxref=GeneID:81336395,InterPro:IPR005320,InterPro:IPR023172,PFAM:PF03575,NCBI_GP:EGT80263.1;Name=EGT80263.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||;go_process=proteolysis|0006508||;locus_tag=GGE_1666;product=Peptidase E;protein_id=EGT80263.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8948 9647 . + . ID=id-GGE_1666;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8948 9584 . + . ID=id-GGE_1666-2;Note=HMMPanther:PTHR20842~family not named;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8954 9635 . + . ID=id-GGE_1666-3;Note=Gene3D:3.40.50.880;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8954 9599 . + . ID=id-GGE_1666-4;Dbxref=InterPro:IPR023172;Note=HAMAP:MF_00510~peptidase_e~peptidase s51%2C dipeptidase e;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 8957 9593 . + . ID=id-GGE_1666-5;Note=specific~superfamily%3B label: GAT1_Peptidase_E;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9104 9407 . + . ID=id-GGE_1666-6;Dbxref=InterPro:IPR005320,PFAM:PF03575;Note=peptidase_s51~peptidase s51;gbkey=misc_feature;gene=pepE;locus_tag=GGE_1666 GCA_000222085.2|AFQR01000032.1 Genbank gene 9670 10965 . + . ID=gene-GGE_1667;Name=GGE_1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1667 GCA_000222085.2|AFQR01000032.1 Genbank CDS 9670 10965 . + 0 ID=cds-EGT80264.1;Parent=gene-GGE_1667;Dbxref=GeneID:229847402,InterPro:IPR004669,InterPro:IPR018385,PFAM:PF03606,TIGRFAM:TIGR00771,NCBI_GP:EGT80264.1;Name=EGT80264.1;Note=ZP_04467502;Ontology_term=GO:0015740,GO:0016021,GO:0015556;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||;go_process=C4-dicarboxylate transport|0015740||;locus_tag=GGE_1667;product=Putative C4-dicarboxylate transporter;protein_id=EGT80264.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9682 9724 . + . ID=id-GGE_1667;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1667 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9685 10951 . + . ID=id-GGE_1667-2;Note=superfamily%3B label: DcuC superfamily;gbkey=misc_feature;locus_tag=GGE_1667 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9811 10804 . + . ID=id-GGE_1667-3;Dbxref=InterPro:IPR004669,TIGRFAM:TIGR00771;Note=dcuc: transporter%2C anaerobic c4-dicarboxylat~c4-dicarboxylate anaerobic carrier;gbkey=misc_feature;locus_tag=GGE_1667 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9829 10798 . + . ID=id-GGE_1667-4;Dbxref=InterPro:IPR018385,PFAM:PF03606;Note=dcuc~c4-dicarboxylate anaerobic carrier-like;gbkey=misc_feature;locus_tag=GGE_1667 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9697 10807 . - . ID=id-AFQR01000032.1:9697..10807;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9700 10018 . - . ID=id-AFQR01000032.1:9700..10018;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9715 10918 . - . ID=id-AFQR01000032.1:9715..10918;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9718 10357 . - . ID=id-AFQR01000032.1:9718..10357;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9730 10666 . - . ID=id-AFQR01000032.1:9730..10666;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 10822 . - . ID=id-AFQR01000032.1:9739..10822;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 10555 . - . ID=id-AFQR01000032.1:9739..10555;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 10450 . - . ID=id-AFQR01000032.1:9739..10450;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 10339 . - . ID=id-AFQR01000032.1:9739..10339;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 10210 . - . ID=id-AFQR01000032.1:9739..10210;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 9958 . - . ID=id-AFQR01000032.1:9739..9958;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 9832 . - . ID=id-AFQR01000032.1:9739..9832;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 9739 9754 . - . ID=id-AFQR01000032.1:9739..9754;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 10994 11003 . + . ID=id-AFQR01000032.1:10994..11003;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 11036 12307 . + . ID=gene-GGE_1668;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank CDS 11036 12307 . + 0 ID=cds-EGT80265.1;Parent=gene-GGE_1668;Dbxref=GeneID:1175265,InterPro:IPR002933,InterPro:IPR010168,InterPro:IPR011650,InterPro:IPR017439,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF005962,TIGRFAM:TIGR01891,NCBI_GP:EGT80265.1;Name=EGT80265.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=abgA;go_function=hydrolase activity|0016787||;go_process=metabolic process|0008152||;locus_tag=GGE_1668;product=Aminobenzoyl-glutamate utilization protein A;protein_id=EGT80265.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11036 12305 . + . ID=id-GGE_1668;Dbxref=InterPro:IPR017439,PIR:PIRSF005962;Note=multi-dom~metal-dependent amidase/aminoacylase/carboxypeptidase~peptidase m20d%2C mername-aa028/carboxypeptidase ss1%3B label: AbgB;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11048 12293 . + . ID=id-GGE_1668-2;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11057 12281 . + . ID=id-GGE_1668-3;Note=HMMPanther:PTHR11014:SF44~n-acyl-l-amino acid amidohydrolase~HMMPanther:PTHR11014~family not named;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11060 12245 . + . ID=id-GGE_1668-4;Dbxref=InterPro:IPR010168,TIGRFAM:TIGR01891;Note=amidohydrolase: amidohydrolase~peptidase m20d%2C amidohydrolase;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11300 11696 . + . ID=id-GGE_1668-5;Note=superfamily%3B label: M20_dimer superfamily;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11348 11984 . + . ID=id-GGE_1668-6;Dbxref=InterPro:IPR002933,PFAM:PF01546;Note=peptidase_m20~peptidase m20;gbkey=misc_feature;gene=abgA;locus_tag=GGE_1668 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11072 12050 . - . ID=id-AFQR01000032.1:11072..12050;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11300 11708 . - . ID=id-AFQR01000032.1:11300..11708;Dbxref=InterPro:IPR011650,PFAM:PF07687;Note=m20_dimer~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11318 12023 . - . ID=id-AFQR01000032.1:11318..12023;Note=Gene3D:3.40.630.10;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11354 11699 . - . ID=id-AFQR01000032.1:11354..11699;Note=Gene3D:3.30.70.360;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 11381 11690 . - . ID=id-AFQR01000032.1:11381..11690;Dbxref=InterPro:IPR011650;Note=superfamily:SSF55031~bacterial exopeptidase dimerization domain~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank gene 12400 14373 . + . ID=gene-GGE_1669;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank CDS 12400 14373 . + 0 ID=cds-EGT80266.1;Parent=gene-GGE_1669;Dbxref=GeneID:1168981,InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR006294,InterPro:IPR008334,PFAM:PF00149,PFAM:PF02872,TIGRFAM:TIGR01390,NCBI_GP:EGT80266.1;Name=EGT80266.1;Ontology_term=GO:0009166,GO:0009117,GO:0008663,GO:0016788,GO:0016787,GO:0046872,GO:0000166;gbkey=CDS;gene=cpdB;go_function=2' 3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||,hydrolase activity acting on ester bonds|0016788||,hydrolase activity|0016787||,metal ion binding|0046872||,nucleotide binding|0000166||;go_process=nucleotide catabolic process|0009166||,nucleotide metabolic process|0009117||;locus_tag=GGE_1669;product=putative nucleotidase-like protein;protein_id=EGT80266.1;transl_table=11 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12424 14350 . + . ID=id-GGE_1669;Dbxref=InterPro:IPR006179;Note=HMMPanther:PTHR11575:SF6~2%2C3-cyclic-nucleotide 2-phosphodiesterase~HMMPanther:PTHR11575~family not named~5'-nucleotidase/apyrase;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12472 13438 . + . ID=id-GGE_1669-2;Note=Gene3D:3.60.21.10;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12478 13417 . + . ID=id-GGE_1669-3;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12496 14278 . + . ID=id-GGE_1669-4;Dbxref=InterPro:IPR006294,TIGRFAM:TIGR01390;Note=multi-dom~cycnucdiestase: 2'%2C3'-cyclic-nucleotid~2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase%3B label: cpdB;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12502 13294 . + . ID=id-GGE_1669-5;Note=specific~superfamily%3B label: MPP_CpdB_N;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12502 13111 . + . ID=id-GGE_1669-6;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=metallophos~metallo-dependent phosphatase;gbkey=misc_feature;gene=cpdB;locus_tag=GGE_1669 GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12430 12436 . - . ID=id-AFQR01000032.1:12430..12436;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12436 12757 . - . ID=id-AFQR01000032.1:12436..12757;Dbxref=InterPro:IPR006146;Note=PatternScan:PS00786~5_nucleotidase_2~5'-nucleotidase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12439 12502 . - . ID=id-AFQR01000032.1:12439..12502;Dbxref=InterPro:IPR006146;Note=PatternScan:PS00785~5_nucleotidase_1~5'-nucleotidase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12454 13075 . - . ID=id-AFQR01000032.1:12454..13075;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12457 12496 . - . ID=id-AFQR01000032.1:12457..12496;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12460 14020 . - . ID=id-AFQR01000032.1:12460..14020;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12463 13279 . - . ID=id-AFQR01000032.1:12463..13279;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12472 13714 . - . ID=id-AFQR01000032.1:12472..13714;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12472 13159 . - . ID=id-AFQR01000032.1:12472..13159;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12985 13495 . - . ID=id-AFQR01000032.1:12985..13495;Note=superfamily%3B label: 5_nucleotid_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 12988 13495 . - . ID=id-AFQR01000032.1:12988..13495;Dbxref=InterPro:IPR008334,PFAM:PF02872;Note=5_nucleotid_c~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 13114 13510 . - . ID=id-AFQR01000032.1:13114..13510;Dbxref=InterPro:IPR008334;Note=Gene3D:3.90.780.10~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 13135 13495 . - . ID=id-AFQR01000032.1:13135..13495;Dbxref=InterPro:IPR008334;Note=superfamily:SSF55816~5'-nucleotidase (syn. udp-sugar hydrolase) domain~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000032.1 Genbank sequence_feature 13440 13449 . - . ID=id-AFQR01000032.1:13440..13449;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000031.1 1 21602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000031.1 Genbank region 1 21602 . + . ID=AFQR01000031.1:1..21602;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000031.1 Genbank gene 326 583 . + . ID=gene-GGE_1635;Name=GGE_1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank CDS 326 583 . + 0 ID=cds-EGT80295.1;Parent=gene-GGE_1635;Dbxref=GeneID:229844266,InterPro:IPR020274,PFAM:PF10883,NCBI_GP:EGT80295.1;Name=EGT80295.1;Note=ZP_04464406;gbkey=CDS;locus_tag=GGE_1635;product=Hypothetical protein;protein_id=EGT80295.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 335 557 . + . ID=id-GGE_1635;Dbxref=PFAM:PF10883;Note=duf2681;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 341 380 . + . ID=id-GGE_1635-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 341 368 . + . ID=id-GGE_1635-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 383 509 . + . ID=id-GGE_1635-4;Note=superfamily%3B label: DUF2681 superfamily;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 383 503 . + . ID=id-GGE_1635-5;Dbxref=InterPro:IPR020274;Note=BlastProDom:PD060859~q58zc7_haein_q58zc7~uncharacterised protein family hi1496;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 398 413 . + . ID=id-GGE_1635-6;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1635 GCA_000222085.2|AFQR01000031.1 Genbank gene 576 710 . + . ID=gene-GGE_1636;Name=GGE_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1636 GCA_000222085.2|AFQR01000031.1 Genbank CDS 576 710 . + 0 ID=cds-EGT80296.1;Parent=gene-GGE_1636;Dbxref=GeneID:145633931,NCBI_GP:EGT80296.1;Name=EGT80296.1;Note=ZP_01789651~CGSHi3655_00145;gbkey=CDS;locus_tag=GGE_1636;product=Hypothetical protein;protein_id=EGT80296.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank gene 964 1230 . + . ID=gene-GGE_1637;Name=GGE_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1637 GCA_000222085.2|AFQR01000031.1 Genbank CDS 964 1230 . + 0 ID=cds-EGT80297.1;Parent=gene-GGE_1637;Dbxref=GeneID:319776704,NCBI_GP:EGT80297.1;Name=EGT80297.1;Note=YP_004139192~HICON_02480;gbkey=CDS;locus_tag=GGE_1637;product=Hypothetical protein;protein_id=EGT80297.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 1021 1144 . - . ID=id-AFQR01000031.1:1021..1144;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 1030 1072 . - . ID=id-AFQR01000031.1:1030..1072;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 1033 1144 . - . ID=id-AFQR01000031.1:1033..1144;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 1236 1739 . + . ID=gene-GGE_1638;Name=GGE_1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1638 GCA_000222085.2|AFQR01000031.1 Genbank CDS 1236 1739 . + 0 ID=cds-EGT80298.1;Parent=gene-GGE_1638;Dbxref=GeneID:319897538,InterPro:IPR014926,PFAM:PF08822,NCBI_GP:EGT80298.1;Name=EGT80298.1;Note=YP_004135735;gbkey=CDS;locus_tag=GGE_1638;product=Hypothetical protein;protein_id=EGT80298.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 1236 1731 . + . ID=id-GGE_1638;Dbxref=InterPro:IPR014926,PFAM:PF08822;Note=superfamily~duf1804~protein of unknown function duf1804%3B label: DUF1804 superfamily;gbkey=misc_feature;locus_tag=GGE_1638 GCA_000222085.2|AFQR01000031.1 Genbank gene 1805 3451 . + . ID=gene-GGE_1639;Name=GGE_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1639 GCA_000222085.2|AFQR01000031.1 Genbank CDS 1805 3451 . + 0 ID=cds-EGT80299.1;Parent=gene-GGE_1639;Dbxref=GeneID:319776702,InterPro:IPR006517,TIGRFAM:TIGR01630,NCBI_GP:EGT80299.1;Name=EGT80299.1;Note=YP_004139190;gbkey=CDS;locus_tag=GGE_1639;product=putative methanobacterium phage psiM2%2C terminase large subunit;protein_id=EGT80299.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 1853 3395 . - . ID=id-AFQR01000031.1:1853..3395;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 2216 2939 . - . ID=id-AFQR01000031.1:2216..2939;Note=superfamily%3B label: COG5362 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 2219 2939 . - . ID=id-AFQR01000031.1:2219..2939;Dbxref=InterPro:IPR006517,TIGRFAM:TIGR01630;Note=psim2_orf9: phage hypothetical protein%2C~methanobacterium phage psim2%2C terminase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 2552 2561 . - . ID=id-AFQR01000031.1:2552..2561;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 3463 5073 . + . ID=gene-GGE_1640;Name=GGE_1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1640 GCA_000222085.2|AFQR01000031.1 Genbank CDS 3463 5073 . + 0 ID=cds-EGT80300.1;Parent=gene-GGE_1640;Dbxref=GeneID:229844260,InterPro:IPR009279,PFAM:PF06074,NCBI_GP:EGT80300.1;Name=EGT80300.1;Note=ZP_04464400~CGSHi6P18H1_08060;gbkey=CDS;locus_tag=GGE_1640;product=Hypothetical protein;protein_id=EGT80300.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 3472 5044 . + . ID=id-GGE_1640;Note=superfamily~multi-dom%3B label: COG4383 superfamily;gbkey=misc_feature;locus_tag=GGE_1640 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 3475 5038 . + . ID=id-GGE_1640-2;Dbxref=InterPro:IPR009279,PFAM:PF06074;Note=duf935~protein of unknown function duf935;gbkey=misc_feature;locus_tag=GGE_1640 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 3496 4483 . - . ID=id-AFQR01000031.1:3496..4483;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 3499 4291 . - . ID=id-AFQR01000031.1:3499..4291;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 4752 4761 . - . ID=id-AFQR01000031.1:4752..4761;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 5060 6409 . + . ID=gene-GGE_1641;Name=GGE_1641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1641 GCA_000222085.2|AFQR01000031.1 Genbank CDS 5060 6409 . + 0 ID=cds-EGT80301.1;Parent=gene-GGE_1641;Dbxref=GeneID:240948441,InterPro:IPR006528,PFAM:PF04233,TIGRFAM:TIGR01641,NCBI_GP:EGT80301.1;Name=EGT80301.1;Note=ZP_04752817;gbkey=CDS;locus_tag=GGE_1641;product=putative phage putative head morphogenesis protein%2C SPP1 Gp7;protein_id=EGT80301.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 5060 5807 . + . ID=id-GGE_1641;Note=multi-dom%3B label: COG2369;gbkey=misc_feature;locus_tag=GGE_1641 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 5231 5447 . + . ID=id-GGE_1641-2;Dbxref=InterPro:IPR006528,PFAM:PF04233;Note=phage_mu_f~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature;locus_tag=GGE_1641 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 5234 5456 . + . ID=id-GGE_1641-3;Dbxref=InterPro:IPR006528,TIGRFAM:TIGR01641;Note=phagespp1_gp7: phage putative head morp~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature;locus_tag=GGE_1641 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 5321 5357 . - . ID=id-AFQR01000031.1:5321..5357;Note=superfamily%3B label: Phage_Mu_F superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 6532 6957 . + . ID=gene-GGE_1642;Name=GGE_1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1642 GCA_000222085.2|AFQR01000031.1 Genbank CDS 6532 6957 . + 0 ID=cds-EGT80302.1;Parent=gene-GGE_1642;Dbxref=GeneID:270635240,InterPro:IPR006522,PFAM:PF05069,TIGRFAM:TIGR01635,NCBI_GP:EGT80302.1;Name=EGT80302.1;Note=ZP_06222084;gbkey=CDS;locus_tag=GGE_1642;product=phage virion morphogenesis protein;protein_id=EGT80302.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 6532 6955 . + . ID=id-GGE_1642;Note=superfamily%3B label: Phage_tail_S superfamily;gbkey=misc_feature;locus_tag=GGE_1642 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 6553 6925 . + . ID=id-GGE_1642-2;Dbxref=InterPro:IPR006522,TIGRFAM:TIGR01635;Note=tail_comp_s: phage virion morphogenesis p~phage virion morphogenesis (putative tail completion) protein;gbkey=misc_feature;locus_tag=GGE_1642 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 6556 6922 . + . ID=id-GGE_1642-3;Dbxref=PFAM:PF05069;Note=phage_tail_s;gbkey=misc_feature;locus_tag=GGE_1642 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 6574 6886 . - . ID=id-AFQR01000031.1:6574..6886;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 7239 8285 . + . ID=gene-GGE_1643;Name=GGE_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1643 GCA_000222085.2|AFQR01000031.1 Genbank CDS 7239 8285 . + 0 ID=cds-EGT80303.1;Parent=gene-GGE_1643;Dbxref=GeneID:229844257,InterPro:IPR012106,InterPro:IPR019295,PFAM:PF10123,PIR:PIRSF016624,NCBI_GP:EGT80303.1;Name=EGT80303.1;Note=ZP_04464397;gbkey=CDS;locus_tag=GGE_1643;product=putative I protein;protein_id=EGT80303.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7239 8283 . + . ID=id-GGE_1643;Dbxref=InterPro:IPR012106,PIR:PIRSF016624;Note=predicted protease%2C mu phage/prophage i type~mu phage/prophage i;gbkey=misc_feature;locus_tag=GGE_1643 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7245 8277 . + . ID=id-GGE_1643-2;Note=superfamily%3B label: COG4388 superfamily;gbkey=misc_feature;locus_tag=GGE_1643 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7299 8205 . + . ID=id-GGE_1643-3;Dbxref=InterPro:IPR019295,PFAM:PF10123;Note=mu-like_pro~mu-like prophage i protein;gbkey=misc_feature;locus_tag=GGE_1643 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7299 8202 . + . ID=id-GGE_1643-4;Note=multi-dom%3B label: Mu-like_Pro;gbkey=misc_feature;locus_tag=GGE_1643 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7278 8199 . - . ID=id-AFQR01000031.1:7278..8199;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 7823 7832 . - . ID=id-AFQR01000031.1:7823..7832;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 8285 9208 . + . ID=gene-GGE_1644;Name=GGE_1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1644 GCA_000222085.2|AFQR01000031.1 Genbank CDS 8285 9208 . + 0 ID=cds-EGT80304.1;Parent=gene-GGE_1644;Dbxref=GeneID:270659678,InterPro:IPR018774,PFAM:PF10124,NCBI_GP:EGT80304.1;Name=EGT80304.1;Note=ZP_06222346;gbkey=CDS;locus_tag=GGE_1644;product=bacteriophage mu T-like protein;protein_id=EGT80304.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 8312 9173 . + . ID=id-GGE_1644;Dbxref=InterPro:IPR018774,PFAM:PF10124;Note=superfamily~mu-like_gpt~mu-like major head subunit gpt%2C prophage%3B label: Mu-like_gpT superfamily;gbkey=misc_feature;locus_tag=GGE_1644 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 8315 8930 . - . ID=id-AFQR01000031.1:8315..8930;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 9248 9526 . + . ID=gene-GGE_1645;Name=GGE_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1645 GCA_000222085.2|AFQR01000031.1 Genbank CDS 9248 9526 . + 0 ID=cds-EGT80305.1;Parent=gene-GGE_1645;Dbxref=GeneID:270676204,NCBI_GP:EGT80305.1;Name=EGT80305.1;Note=ZP_06222674;gbkey=CDS;locus_tag=GGE_1645;product=Hypothetical protein;protein_id=EGT80305.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 9425 9434 . + . ID=id-GGE_1645;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1645 GCA_000222085.2|AFQR01000031.1 Genbank gene 9536 9967 . + . ID=gene-GGE_1646;Name=GGE_1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1646 GCA_000222085.2|AFQR01000031.1 Genbank CDS 9536 9967 . + 0 ID=cds-EGT80306.1;Parent=gene-GGE_1646;Dbxref=GeneID:229844254,InterPro:IPR009752,PFAM:PF07030,NCBI_GP:EGT80306.1;Name=EGT80306.1;Note=ZP_04464394~CGSHi6P18H1_08030;gbkey=CDS;locus_tag=GGE_1646;product=Hypothetical protein;protein_id=EGT80306.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 9545 9926 . + . ID=id-GGE_1646;Dbxref=InterPro:IPR009752,PFAM:PF07030;Note=superfamily~duf1320~protein of unknown function duf1320%3B label: DUF1320 superfamily;gbkey=misc_feature;locus_tag=GGE_1646 GCA_000222085.2|AFQR01000031.1 Genbank gene 9951 10613 . + . ID=gene-GGE_1647;Name=GGE_1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1647 GCA_000222085.2|AFQR01000031.1 Genbank CDS 9951 10613 . + 0 ID=cds-EGT80307.1;Parent=gene-GGE_1647;Dbxref=GeneID:229844253,InterPro:IPR014972,PFAM:PF08873,NCBI_GP:EGT80307.1;Name=EGT80307.1;Note=ZP_04464393~CGSHi6P18H1_08025;gbkey=CDS;locus_tag=GGE_1647;product=Hypothetical protein;protein_id=EGT80307.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 9951 10509 . + . ID=id-GGE_1647;Note=superfamily%3B label: DUF1834 superfamily;gbkey=misc_feature;locus_tag=GGE_1647 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 9957 10506 . + . ID=id-GGE_1647-2;Dbxref=InterPro:IPR014972,PFAM:PF08873;Note=duf1834~protein of unknown function duf1834;gbkey=misc_feature;locus_tag=GGE_1647 GCA_000222085.2|AFQR01000031.1 Genbank gene 10585 10767 . + . ID=gene-GGE_1648;Name=GGE_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1648 GCA_000222085.2|AFQR01000031.1 Genbank CDS 10585 10767 . + 0 ID=cds-EGT80308.1;Parent=gene-GGE_1648;Dbxref=GeneID:229844251,NCBI_GP:EGT80308.1;Name=EGT80308.1;Note=ZP_04464391~CGSHi6P18H1_08015;gbkey=CDS;locus_tag=GGE_1648;product=Hypothetical protein;protein_id=EGT80308.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank gene 10760 12175 . + . ID=gene-GGE_1649;Name=GGE_1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1649 GCA_000222085.2|AFQR01000031.1 Genbank CDS 10760 12175 . + 0 ID=cds-EGT80309.1;Parent=gene-GGE_1649;Dbxref=GeneID:229844250,InterPro:IPR007067,PFAM:PF04984,NCBI_GP:EGT80309.1;Name=EGT80309.1;Note=ZP_04464390;gbkey=CDS;locus_tag=GGE_1649;product=bacteriophage Mu tail sheath family protein;protein_id=EGT80309.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 10775 12161 . + . ID=id-GGE_1649;Note=multi-dom%3B label: COG4386;gbkey=misc_feature;locus_tag=GGE_1649 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 10802 12131 . + . ID=id-GGE_1649-2;Note=superfamily%3B label: Phage_sheath_1 superfamily;gbkey=misc_feature;locus_tag=GGE_1649 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 10802 12122 . + . ID=id-GGE_1649-3;Dbxref=InterPro:IPR007067,PFAM:PF04984;Note=phage_sheath_1~phage tail sheath protein;gbkey=misc_feature;locus_tag=GGE_1649 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 11980 11989 . + . ID=id-GGE_1649-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1649 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 10802 11066 . - . ID=id-AFQR01000031.1:10802..11066;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 12185 12556 . + . ID=gene-GGE_1650;Name=GGE_1650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1650 GCA_000222085.2|AFQR01000031.1 Genbank CDS 12185 12556 . + 0 ID=cds-EGT80310.1;Parent=gene-GGE_1650;Dbxref=GeneID:229844249,NCBI_GP:EGT80310.1;Name=EGT80310.1;Note=ZP_04464389~CGSHi6P18H1_08005;gbkey=CDS;locus_tag=GGE_1650;product=Hypothetical protein;protein_id=EGT80310.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank gene 12556 12897 . + . ID=gene-GGE_1651;Name=GGE_1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1651 GCA_000222085.2|AFQR01000031.1 Genbank CDS 12556 12897 . + 0 ID=cds-EGT80311.1;Parent=gene-GGE_1651;Dbxref=GeneID:229844248,NCBI_GP:EGT80311.1;Name=EGT80311.1;Note=ZP_04464388~CGSHi6P18H1_08000;gbkey=CDS;locus_tag=GGE_1651;product=Hypothetical protein;protein_id=EGT80311.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank gene 13165 15453 . + . ID=gene-GGE_1652;Name=GGE_1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1652 GCA_000222085.2|AFQR01000031.1 Genbank CDS 13165 15453 . + 0 ID=cds-EGT80312.1;Parent=gene-GGE_1652;Dbxref=GeneID:229844246,InterPro:IPR010090,PFAM:PF10145,NCBI_GP:EGT80312.1;Name=EGT80312.1;Note=ZP_04464386;gbkey=CDS;locus_tag=GGE_1652;product=putative phage tail tape measure protein;protein_id=EGT80312.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13225 13231 . + . ID=id-GGE_1652;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1652 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13651 13795 . + . ID=id-GGE_1652-2;Dbxref=InterPro:IPR010090,PFAM:PF10145;Note=phagemin_tail~phage tail tape measure protein tp901%2C core region;gbkey=misc_feature;locus_tag=GGE_1652 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13651 13699 . + . ID=id-GGE_1652-3;Note=multi-dom%3B label: PhageMin_Tail;gbkey=misc_feature;locus_tag=GGE_1652 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 15160 15169 . + . ID=id-GGE_1652-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1652 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13204 14266 . - . ID=id-AFQR01000031.1:13204..14266;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13210 13492 . - . ID=id-AFQR01000031.1:13210..13492;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13231 14899 . - . ID=id-AFQR01000031.1:13231..14899;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13231 14260 . - . ID=id-AFQR01000031.1:13231..14260;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 13234 14881 . - . ID=id-AFQR01000031.1:13234..14881;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 15456 16790 . + . ID=gene-GGE_1653;Name=GGE_1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1653 GCA_000222085.2|AFQR01000031.1 Genbank CDS 15456 16790 . + 0 ID=cds-EGT80313.1;Parent=gene-GGE_1653;Dbxref=GeneID:229844245,InterPro:IPR009826,PFAM:PF07157,NCBI_GP:EGT80313.1;Name=EGT80313.1;Note=ZP_04464385;gbkey=CDS;locus_tag=GGE_1653;product=putative phage virion protein;protein_id=EGT80313.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 15462 16023 . + . ID=id-GGE_1653;Dbxref=InterPro:IPR009826;Note=BlastProDom:PD332323~q9jzc9_neimb_q9jzc9~dna circulation;gbkey=misc_feature;locus_tag=GGE_1653 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 15465 16782 . + . ID=id-GGE_1653-2;Note=multi-dom%3B label: COG4228;gbkey=misc_feature;locus_tag=GGE_1653 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 15477 15723 . + . ID=id-GGE_1653-3;Dbxref=InterPro:IPR009826,PFAM:PF07157;Note=dna_circ_n~dna circulation;gbkey=misc_feature;locus_tag=GGE_1653 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 15480 15720 . + . ID=id-GGE_1653-4;Note=superfamily%3B label: DNA_circ_N superfamily;gbkey=misc_feature;locus_tag=GGE_1653 GCA_000222085.2|AFQR01000031.1 Genbank gene 16780 17904 . + . ID=gene-GGE_1654;Name=GGE_1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1654 GCA_000222085.2|AFQR01000031.1 Genbank CDS 16780 17904 . + 0 ID=cds-EGT80314.1;Parent=gene-GGE_1654;Dbxref=GeneID:229844244,InterPro:IPR010277,InterPro:IPR023399,PFAM:PF05954,NCBI_GP:EGT80314.1;Name=EGT80314.1;Note=ZP_04464384;gbkey=CDS;locus_tag=GGE_1654;product=bacteriophage Mu P family protein;protein_id=EGT80314.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16804 17797 . + . ID=id-GGE_1654;Note=superfamily%3B label: COG4379 superfamily;gbkey=misc_feature;locus_tag=GGE_1654 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16807 17773 . + . ID=id-GGE_1654-2;Note=multi-dom%3B label: Phage_GPD;gbkey=misc_feature;locus_tag=GGE_1654 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16807 17767 . + . ID=id-GGE_1654-3;Dbxref=InterPro:IPR010277,PFAM:PF05954;Note=phage_gpd~bacteriophage p2%2C gpd%2C late control;gbkey=misc_feature;locus_tag=GGE_1654 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16819 17824 . - . ID=id-AFQR01000031.1:16819..17824;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16975 17404 . - . ID=id-AFQR01000031.1:16975..17404;Dbxref=InterPro:IPR023399;Note=Gene3D:3.30.1920.10~bacteriophage mu%2C gpp%2C baseplate domain;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 16993 17101 . - . ID=id-AFQR01000031.1:16993..17101;Note=Gene3D:3.55.50.10;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17017 17617 . - . ID=id-AFQR01000031.1:17017..17617;Note=Gene3D:2.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 17914 18549 . + . ID=gene-GGE_1655;Name=GGE_1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank CDS 17914 18549 . + 0 ID=cds-EGT80315.1;Parent=gene-GGE_1655;Dbxref=GeneID:229844243,InterPro:IPR010688,InterPro:IPR013046,InterPro:IPR014462,PFAM:PF06890,PIR:PIRSF012337,TIGRFAM:TIGR01644,NCBI_GP:EGT80315.1;Name=EGT80315.1;Note=ZP_04464383;gbkey=CDS;locus_tag=GGE_1655;product=phage baseplate assembly protein V;protein_id=EGT80315.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17914 18547 . + . ID=id-GGE_1655;Dbxref=InterPro:IPR014462,PIR:PIRSF012337;Note=phage-associated protein gp45~mu-like prophage protein gp45;gbkey=misc_feature;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17926 18517 . + . ID=id-GGE_1655-2;Note=superfamily%3B label: Phage_base_V superfamily;gbkey=misc_feature;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17950 17959 . + . ID=id-GGE_1655-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17959 18505 . + . ID=id-GGE_1655-4;Dbxref=InterPro:IPR013046,TIGRFAM:TIGR01644;Note=phage_p2_v: phage baseplate assembly prote~phage-related baseplate assembly protein v;gbkey=misc_feature;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 17986 18460 . + . ID=id-GGE_1655-5;Dbxref=InterPro:IPR010688,PFAM:PF06890;Note=phage_mu_gp45~bacteriophage mu gp45;gbkey=misc_feature;locus_tag=GGE_1655 GCA_000222085.2|AFQR01000031.1 Genbank gene 18619 18969 . + . ID=gene-GGE_1656;Name=GGE_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1656 GCA_000222085.2|AFQR01000031.1 Genbank CDS 18619 18969 . + 0 ID=cds-EGT80316.1;Parent=gene-GGE_1656;Dbxref=GeneID:301170307,InterPro:IPR010877,PFAM:PF07409,NCBI_GP:EGT80316.1;Name=EGT80316.1;Note=CBW29913;gbkey=CDS;locus_tag=GGE_1656;product=Hypothetical protein;protein_id=EGT80316.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 18640 18949 . + . ID=id-GGE_1656;Note=superfamily%3B label: GP46 superfamily;gbkey=misc_feature;locus_tag=GGE_1656 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 18724 18850 . + . ID=id-GGE_1656-2;Dbxref=InterPro:IPR010877,PFAM:PF07409;Note=gp46~phage gp46;gbkey=misc_feature;locus_tag=GGE_1656 GCA_000222085.2|AFQR01000031.1 Genbank gene 18984 20045 . + . ID=gene-GGE_1657;Name=GGE_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1657 GCA_000222085.2|AFQR01000031.1 Genbank CDS 18984 20045 . + 0 ID=cds-EGT80317.1;Parent=gene-GGE_1657;Dbxref=GeneID:229844241,InterPro:IPR006949,PFAM:PF04865,NCBI_GP:EGT80317.1;Name=EGT80317.1;Note=ZP_04464381;gbkey=CDS;locus_tag=GGE_1657;product=Baseplate J family protein;protein_id=EGT80317.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 18984 20040 . + . ID=id-GGE_1657;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_1657 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 19182 19722 . + . ID=id-GGE_1657-2;Dbxref=InterPro:IPR006949,PFAM:PF04865;Note=baseplate_j~baseplate assembly protein j-like%2C predicted;gbkey=misc_feature;locus_tag=GGE_1657 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 19332 19341 . + . ID=id-GGE_1657-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1657 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 19017 19518 . - . ID=id-AFQR01000031.1:19017..19518;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 19038 19338 . - . ID=id-AFQR01000031.1:19038..19338;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000031.1 Genbank gene 20003 20638 . + . ID=gene-GGE_1658;Name=GGE_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1658 GCA_000222085.2|AFQR01000031.1 Genbank CDS 20003 20638 . + 0 ID=cds-EGT80318.1;Parent=gene-GGE_1658;Dbxref=GeneID:301170305,InterPro:IPR018755,PFAM:PF10076,NCBI_GP:EGT80318.1;Name=EGT80318.1;Note=CBW29911;gbkey=CDS;locus_tag=GGE_1658;product=Hypothetical protein;protein_id=EGT80318.1;transl_table=11 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 20066 20567 . + . ID=id-GGE_1658;Note=superfamily%3B label: DUF2313 superfamily;gbkey=misc_feature;locus_tag=GGE_1658 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 20072 20561 . + . ID=id-GGE_1658-2;Dbxref=InterPro:IPR018755,PFAM:PF10076;Note=duf2313~protein of unknown function duf2313%2C mu protein gp48;gbkey=misc_feature;locus_tag=GGE_1658 GCA_000222085.2|AFQR01000031.1 Genbank sequence_feature 20165 20174 . + . ID=id-GGE_1658-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1658 ##sequence-region AFQR01000030.1 1 23074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000030.1 Genbank region 1 23074 . + . ID=AFQR01000030.1:1..23074;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000030.1 Genbank gene 57 521 . - . ID=gene-GGE_1609;Name=GGE_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1609 GCA_000222085.2|AFQR01000030.1 Genbank CDS 57 521 . - 0 ID=cds-EGT80353.1;Parent=gene-GGE_1609;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT80353.1;Name=EGT80353.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1609;product=transposase like protein;protein_id=EGT80353.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 72 450 . - . ID=id-GGE_1609;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1609 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 78 447 . - . ID=id-GGE_1609-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1609 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 102 414 . - . ID=id-GGE_1609-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1609 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 105 411 . - . ID=id-GGE_1609-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1609 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 718 727 . + . ID=id-AFQR01000030.1:718..727;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 768 1160 . - . ID=gene-GGE_1610;Name=GGE_1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank CDS 768 1160 . - 0 ID=cds-EGT80354.1;Parent=gene-GGE_1610;Dbxref=GeneID:68249204,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR015358,PFAM:PF00376,PFAM:PF09278,NCBI_GP:EGT80354.1;Name=EGT80354.1;Note=YP_248316;Ontology_term=GO:0006355,GO:0000166,GO:0003700;gbkey=CDS;go_function=nucleotide binding|0000166||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1610;product=HTH-type transcriptional regulator;protein_id=EGT80354.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 768 1143 . - . ID=id-GGE_1610;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 768 1140 . - . ID=id-GGE_1610-2;Note=specific~superfamily%3B label: HTH_CadR-PbrR;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 768 975 . - . ID=id-GGE_1610-3;Dbxref=InterPro:IPR000551;Note=ProfileScan:PS50937~hth_merr_2~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 768 930 . - . ID=id-GGE_1610-4;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 774 1143 . - . ID=id-GGE_1610-5;Note=multi-dom%3B label: zntR;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 774 882 . - . ID=id-GGE_1610-6;Dbxref=InterPro:IPR000551,PFAM:PF00376;Note=merr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 774 804 . - . ID=id-GGE_1610-7;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 807 810 . - . ID=id-GGE_1610-8;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 900 957 . - . ID=id-GGE_1610-9;Dbxref=InterPro:IPR015358,PFAM:PF09278;Note=merr-dna-bind~dna-binding protein;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 933 990 . - . ID=id-GGE_1610-10;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;locus_tag=GGE_1610 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 831 879 . + . ID=id-AFQR01000030.1:831..879;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 1185 1862 . - . ID=gene-GGE_1611;Name=GGE_1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1611 GCA_000222085.2|AFQR01000030.1 Genbank CDS 1185 1862 . - 0 ID=cds-EGT80355.1;Parent=gene-GGE_1611;Dbxref=GeneID:68249205,InterPro:IPR002524,PFAM:PF01545,NCBI_GP:EGT80355.1;Name=EGT80355.1;Note=YP_248317;Ontology_term=GO:0006812,GO:0055085,GO:0016020,GO:0008324;gbkey=CDS;go_component=membrane|0016020||;go_function=cation transmembrane transporter activity|0008324||;go_process=cation transport|0006812||,transmembrane transport|0055085||;locus_tag=GGE_1611;product=zinc transporter ZitB;protein_id=EGT80355.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1239 1803 . - . ID=id-GGE_1611;Note=superfamily%3B label: Cation_efflux superfamily;gbkey=misc_feature;locus_tag=GGE_1611 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1269 1737 . - . ID=id-GGE_1611-2;Dbxref=InterPro:IPR002524;Note=HMMPanther:PTHR11562:SF10~subfamily not named~HMMPanther:PTHR11562~family not named~cation efflux protein~Gene3D:1.20.1510.10;gbkey=misc_feature;locus_tag=GGE_1611 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1290 1716 . - . ID=id-GGE_1611-3;Dbxref=InterPro:IPR002524,PFAM:PF01545;Note=cation_efflux~cation efflux protein;gbkey=misc_feature;locus_tag=GGE_1611 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1242 1452 . + . ID=id-AFQR01000030.1:1242..1452;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1254 1743 . + . ID=id-AFQR01000030.1:1254..1743;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1254 1656 . + . ID=id-AFQR01000030.1:1254..1656;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1254 1545 . + . ID=id-AFQR01000030.1:1254..1545;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 1254 1281 . + . ID=id-AFQR01000030.1:1254..1281;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 2367 4256 . + . ID=gene-GGE_1612;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank CDS 2367 4256 . + 0 ID=cds-EGT80356.1;Parent=gene-GGE_1612;Dbxref=GeneID:81170546,InterPro:IPR002218,InterPro:IPR004416,InterPro:IPR020595,PFAM:PF01134,TIGRFAM:TIGR00136,NCBI_GP:EGT80356.1;Name=EGT80356.1;Ontology_term=GO:0008033,GO:0002098,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||;go_process=tRNA processing|0008033||,tRNA wobble uridine modification|0002098||;locus_tag=GGE_1612;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=EGT80356.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2367 4233 . + . ID=id-GGE_1612;Note=HMMPanther:PTHR11806~family not named;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2376 4242 . + . ID=id-GGE_1612-2;Note=superfamily%3B label: Gid superfamily;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2382 4227 . + . ID=id-GGE_1612-3;Dbxref=InterPro:IPR004416;Note=HAMAP:MF_00129~mnmg_gida~glucose-inhibited division protein a;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2382 3141 . + . ID=id-GGE_1612-4;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2388 4218 . + . ID=id-GGE_1612-5;Dbxref=InterPro:IPR004416,TIGRFAM:TIGR00136;Note=multi-dom~gida: trna uridine 5-carboxymethylaminomethy~glucose-inhibited division protein a%3B label: gidA;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2391 3543 . + . ID=id-GGE_1612-6;Dbxref=InterPro:IPR002218,PFAM:PF01134;Note=gida~glucose-inhibited division protein a-related;gbkey=misc_feature;gene=mnmG;locus_tag=GGE_1612 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2403 2925 . - . ID=id-AFQR01000030.1:2403..2925;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2412 4023 . - . ID=id-AFQR01000030.1:2412..4023;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2412 3186 . - . ID=id-AFQR01000030.1:2412..3186;Dbxref=InterPro:IPR020595;Note=PatternScan:PS01280~gida_1~glucose-inhibited division protein a-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2439 3471 . - . ID=id-AFQR01000030.1:2439..3471;Dbxref=InterPro:IPR020595;Note=PatternScan:PS01281~gida_2~glucose-inhibited division protein a-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 2553 3369 . - . ID=id-AFQR01000030.1:2553..3369;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4277 4286 . + . ID=id-AFQR01000030.1:4277..4286;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4332 4488 . - . ID=id-AFQR01000030.1:4332..4488;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 4623 5183 . - . ID=gene-GGE_1613;Name=GGE_1613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank CDS 4623 5183 . - 0 ID=cds-EGT80357.1;Parent=gene-GGE_1613;Dbxref=InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,NCBI_GP:EGT80357.1;Name=EGT80357.1;Note=Hypothetical nAD(P)-binding domain;Ontology_term=GO:0008152,GO:0005488,GO:0003824;gbkey=CDS;go_function=binding|0005488||,catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_1613;product=putative nADP-binding domain-containing protein;protein_id=EGT80357.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4623 5181 . - . ID=id-GGE_1613;Note=HMMPanther:PTHR14194:SF22~subfamily not named~HMMPanther:PTHR14194~family not named;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4629 4659 . - . ID=id-GGE_1613-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4632 5175 . - . ID=id-GGE_1613-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4635 5160 . - . ID=id-GGE_1613-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4641 5049 . - . ID=id-GGE_1613-5;Dbxref=InterPro:IPR008030,PFAM:PF05368;Note=nmra~nmra-like;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4665 5082 . - . ID=id-GGE_1613-6;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_1613 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 4677 5127 . + . ID=id-AFQR01000030.1:4677..5127;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 5350 5709 . + . ID=gene-GGE_1614;Name=GGE_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank CDS 5350 5709 . + 0 ID=cds-EGT80358.1;Parent=gene-GGE_1614;Dbxref=InterPro:IPR002577,InterPro:IPR011991,PFAM:PF01638,NCBI_GP:EGT80358.1;Name=EGT80358.1;Note=Hypothetical winged helix DNA-binding domain;gbkey=CDS;locus_tag=GGE_1614;product=putative winged helix DNA-binding domain-containing protein;protein_id=EGT80358.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5374 5656 . + . ID=id-GGE_1614;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5395 5665 . + . ID=id-GGE_1614-2;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5395 5647 . + . ID=id-GGE_1614-3;Dbxref=InterPro:IPR002577;Note=ProfileScan:PS51118~hth_hxlr~helix-turn-helix%2C hxlr type;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5395 5623 . + . ID=id-GGE_1614-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5422 5611 . + . ID=id-GGE_1614-5;Dbxref=InterPro:IPR002577,PFAM:PF01638;Note=hxlr~helix-turn-helix%2C hxlr type;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5449 5689 . + . ID=id-GGE_1614-6;Dbxref=InterPro:IPR002577;Note=ProfileScan:PS51118~hth_hxlr~helix-turn-helix%2C hxlr type;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5455 5677 . + . ID=id-GGE_1614-7;Dbxref=InterPro:IPR002577,PFAM:PF01638;Note=hxlr~helix-turn-helix%2C hxlr type;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5458 5671 . + . ID=id-GGE_1614-8;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5458 5659 . + . ID=id-GGE_1614-9;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5467 5665 . + . ID=id-GGE_1614-10;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_1614 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5717 5726 . - . ID=id-AFQR01000030.1:5717..5726;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 5766 6377 . + . ID=gene-GGE_1615;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank CDS 5766 6377 . + 0 ID=cds-EGT80359.1;Parent=gene-GGE_1615;Dbxref=GeneID:1169897,InterPro:IPR003682,PFAM:PF02527,PIR:PIRSF003078,TIGRFAM:TIGR00138,NCBI_GP:EGT80359.1;Name=EGT80359.1;Ontology_term=GO:0006364,GO:0005737,GO:0008649;gbkey=CDS;gene=rsmG;go_component=cytoplasm|0005737||;go_function=rRNA methyltransferase activity|0008649||;go_process=rRNA processing|0006364||;locus_tag=GGE_1615;product=Ribosomal RNA small subunit methyltransferase G;protein_id=EGT80359.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5766 6375 . + . ID=id-GGE_1615;Dbxref=InterPro:IPR003682,PIR:PIRSF003078;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase~methyltransferase gidb (glucose inhibited division protein b)~rrna small subunit methyltransferase g;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5775 6369 . + . ID=id-GGE_1615-2;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5814 6330 . + . ID=id-GGE_1615-3;Dbxref=InterPro:IPR003682;Note=HAMAP:MF_00074~16srrna_methyltr_g~rrna small subunit methyltransferase g;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5826 6306 . + . ID=id-GGE_1615-4;Dbxref=InterPro:IPR003682,PFAM:PF02527;Note=gidb~rrna small subunit methyltransferase g;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5838 6306 . + . ID=id-GGE_1615-5;Dbxref=InterPro:IPR003682,TIGRFAM:TIGR00138;Note=gidb: 16s rrna methyltransferase gidb~rrna small subunit methyltransferase g;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5865 6279 . + . ID=id-GGE_1615-6;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=rsmG;locus_tag=GGE_1615 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5793 5991 . - . ID=id-AFQR01000030.1:5793..5991;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 5811 5820 . - . ID=id-AFQR01000030.1:5811..5820;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 6497 6829 . + . ID=gene-GGE_1616;Name=GGE_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1616 GCA_000222085.2|AFQR01000030.1 Genbank CDS 6497 6829 . + 0 ID=cds-EGT80360.1;Parent=gene-GGE_1616;Dbxref=GeneID:148825235,InterPro:IPR005598,PFAM:PF03899,NCBI_GP:EGT80360.1;Name=EGT80360.1;Note=YP_001289988;Ontology_term=GO:0015986,GO:0045263,GO:0015078;gbkey=CDS;go_component=proton-transporting ATP synthase complex coupling factor F(o)|0045263||;go_function=hydrogen ion transmembrane transporter activity|0015078||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1616;product=F0F1 ATP synthase subunit I;protein_id=EGT80360.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6497 6812 . + . ID=id-GGE_1616;Note=superfamily%3B label: ATP_synt_I superfamily;gbkey=misc_feature;locus_tag=GGE_1616 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6539 6773 . + . ID=id-GGE_1616-2;Dbxref=InterPro:IPR005598,PFAM:PF03899;Note=atp_synt_i~atpase%2C f0 complex%2C subunit i;gbkey=misc_feature;locus_tag=GGE_1616 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6545 6551 . + . ID=id-GGE_1616-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1616 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6566 6740 . - . ID=id-AFQR01000030.1:6566..6740;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6566 6611 . - . ID=id-AFQR01000030.1:6566..6611;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6706 6715 . - . ID=id-AFQR01000030.1:6706..6715;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 6898 7686 . + . ID=gene-GGE_1617;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank CDS 6898 7686 . + 0 ID=cds-EGT80361.1;Parent=gene-GGE_1617;Dbxref=GeneID:1168558,InterPro:IPR000568,InterPro:IPR023011,PFAM:PF00119,TIGRFAM:TIGR01131,NCBI_GP:EGT80361.1;Name=EGT80361.1;Ontology_term=GO:0015986,GO:0045263,GO:0015078;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex coupling factor F(o)|0045263||;go_function=hydrogen ion transmembrane transporter activity|0015078||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1617;product=ATP synthase subunit a;protein_id=EGT80361.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6907 7675 . + . ID=id-GGE_1617;Dbxref=InterPro:IPR000568;Note=HMMPanther:PTHR11410~family not named~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6913 7657 . + . ID=id-GGE_1617-2;Dbxref=InterPro:IPR000568,TIGRFAM:TIGR01131;Note=atp_synt_6_or_a: atp synthase f0%2C a s~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6928 7651 . + . ID=id-GGE_1617-3;Dbxref=InterPro:IPR000568;Note=superfamily~HAMAP:MF_01393~atp_synth_a_bact~atpase%2C f0 complex%2C subunit a%3B label: ATP-synt_A superfamily;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 6967 . + . ID=id-GGE_1617-4;Note=transmembrane_regions;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6970 7591 . + . ID=id-GGE_1617-5;Dbxref=InterPro:IPR000568,PFAM:PF00119;Note=atp-synt_a~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7138 7423 . + . ID=id-GGE_1617-6;Dbxref=InterPro:IPR000568;Note=superfamily:SSF81336~f1f0 atp synthase subunit a~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7150 7423 . + . ID=id-GGE_1617-7;Dbxref=InterPro:IPR000568;Note=Gene3D:1.20.120.220~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature;gene=atpB;locus_tag=GGE_1617 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6928 7468 . - . ID=id-AFQR01000030.1:6928..7468;Dbxref=InterPro:IPR023011;Note=PatternScan:PS00449~atpase_a~atpase%2C f0 complex%2C subunit a%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6946 7618 . - . ID=id-AFQR01000030.1:6946..7618;Dbxref=InterPro:IPR000568;Note=FPrintScan:PR00123~atpasea~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6949 7165 . - . ID=id-AFQR01000030.1:6949..7165;Dbxref=InterPro:IPR000568;Note=FPrintScan:PR00123~atpasea~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 7591 . - . ID=id-AFQR01000030.1:6967..7591;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 7510 . - . ID=id-AFQR01000030.1:6967..7510;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 7459 . - . ID=id-AFQR01000030.1:6967..7459;Dbxref=InterPro:IPR000568;Note=FPrintScan:PR00123~atpasea~atpase%2C f0 complex%2C subunit a;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 7282 . - . ID=id-AFQR01000030.1:6967..7282;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 6967 7156 . - . ID=id-AFQR01000030.1:6967..7156;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 7742 7996 . + . ID=gene-GGE_1618;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank CDS 7742 7996 . + 0 ID=cds-EGT80362.1;Parent=gene-GGE_1618;Dbxref=GeneID:254809994,InterPro:IPR000454,InterPro:IPR002379,InterPro:IPR005953,InterPro:IPR020537,PFAM:PF00137,TIGRFAM:TIGR01260,NCBI_GP:EGT80362.1;Name=EGT80362.1;Ontology_term=GO:0015991,GO:0015986,GO:0045263,GO:0033177,GO:0015078;gbkey=CDS;gene=atpE;go_component=proton-transporting ATP synthase complex coupling factor F(o)|0045263||,proton-transporting two-sector ATPase complex proton-transporting domain|0033177||;go_function=hydrogen ion transmembrane transporter activity|0015078||;go_process=ATP hydrolysis coupled proton transport|0015991||,ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1618;product=ATP synthase subunit c;protein_id=EGT80362.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7742 7976 . + . ID=id-GGE_1618;Dbxref=InterPro:IPR002379;Note=superfamily~superfamily:SSF81333~f1f0 atp synthase subunit c~atpase%2C f0/v0 complex%2C subunit c%3B label: ATP-synt_C superfamily;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7748 7973 . + . ID=id-GGE_1618-2;Dbxref=InterPro:IPR002379;Note=Gene3D:1.20.20.10~atpase%2C f0/v0 complex%2C subunit c;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7763 7811 . + . ID=id-GGE_1618-3;Note=transmembrane_regions;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7766 7949 . + . ID=id-GGE_1618-4;Dbxref=InterPro:IPR000454,InterPro:IPR002379,PFAM:PF00137;Note=HAMAP:MF_01396~atp_synth_c_bact~atpase%2C f0 complex%2C subunit c~atp-synt_c~atpase%2C f0/v0 complex%2C subunit c;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7775 7802 . + . ID=id-GGE_1618-5;Dbxref=InterPro:IPR000454;Note=FPrintScan:PR00124~atpasec~atpase%2C f0 complex%2C subunit c;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7799 7916 . + . ID=id-GGE_1618-6;Dbxref=InterPro:IPR005953,TIGRFAM:TIGR01260;Note=atp_synt_c: atp synthase f0%2C c subunit~atpase%2C f0 complex%2C subunit c%2C bacterial/chloroplast;gbkey=misc_feature;gene=atpE;locus_tag=GGE_1618 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7790 7838 . - . ID=id-AFQR01000030.1:7790..7838;Dbxref=InterPro:IPR000454;Note=FPrintScan:PR00124~atpasec~atpase%2C f0 complex%2C subunit c;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7808 7859 . - . ID=id-AFQR01000030.1:7808..7859;Dbxref=InterPro:IPR020537;Note=PatternScan:PS00605~atpase_c~atpase%2C f0 complex%2C subunit c%2C dccd-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7811 7925 . - . ID=id-AFQR01000030.1:7811..7925;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 7820 7889 . - . ID=id-AFQR01000030.1:7820..7889;Dbxref=InterPro:IPR000454;Note=FPrintScan:PR00124~atpasec~atpase%2C f0 complex%2C subunit c;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 8046 8516 . + . ID=gene-GGE_1619;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank CDS 8046 8516 . + 0 ID=cds-EGT80363.1;Parent=gene-GGE_1619;Dbxref=GeneID:226741465,InterPro:IPR002146,InterPro:IPR005864,PFAM:PF00430,TIGRFAM:TIGR01144,NCBI_GP:EGT80363.1;Name=EGT80363.1;Ontology_term=GO:0015986,GO:0045263,GO:0015078;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex coupling factor F(o)|0045263||;go_function=hydrogen ion transmembrane transporter activity|0015078||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1619;product=ATP synthase subunit b;protein_id=EGT80363.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8046 8514 . + . ID=id-GGE_1619;Dbxref=InterPro:IPR002146;Note=HAMAP:MF_01398~atp_synth_b_bact~atpase%2C f0 complex%2C subunit b/b'%2C bacterial/chloroplast;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8052 8511 . + . ID=id-GGE_1619-2;Note=superfamily%3B label: ATP-synt_B superfamily;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8055 8508 . + . ID=id-GGE_1619-3;Note=multi-dom%3B label: AtpF;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8064 8439 . + . ID=id-GGE_1619-4;Dbxref=InterPro:IPR002146,PFAM:PF00430;Note=atp-synt_b~atpase%2C f0 complex%2C subunit b/b'%2C bacterial/chloroplast;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8067 8115 . + . ID=id-GGE_1619-5;Note=transmembrane_regions;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8076 8487 . + . ID=id-GGE_1619-6;Dbxref=InterPro:IPR005864,TIGRFAM:TIGR01144;Note=atp_synt_b: atp synthase f0%2C b subunit~atpase%2C f0 complex%2C subunit b%2C bacterial;gbkey=misc_feature;gene=atpF;locus_tag=GGE_1619 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8100 8160 . - . ID=id-AFQR01000030.1:8100..8160;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8103 8301 . - . ID=id-AFQR01000030.1:8103..8301;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8112 8178 . - . ID=id-AFQR01000030.1:8112..8178;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8145 8253 . - . ID=id-AFQR01000030.1:8145..8253;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8226 8232 . - . ID=id-AFQR01000030.1:8226..8232;Note=Gene3D:1.20.5.620~superfamily:SSF81573~f1f0 atp synthase subunit b%2C membrane domain;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 8529 9062 . + . ID=gene-GGE_1620;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank CDS 8529 9062 . + 0 ID=cds-EGT80364.1;Parent=gene-GGE_1620;Dbxref=GeneID:1168586,InterPro:IPR000711,InterPro:IPR020781,PFAM:PF00213,TIGRFAM:TIGR01145,NCBI_GP:EGT80364.1;Name=EGT80364.1;Ontology_term=GO:0015986,GO:0005886,GO:0045261,GO:0046933;gbkey=CDS;gene=atpH;go_component=plasma membrane|0005886||,proton-transporting ATP synthase complex catalytic core F(1)|0045261||;go_function=hydrogen ion transporting ATP synthase activity rotational mechanism|0046933||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1620;product=ATP synthase subunit delta;protein_id=EGT80364.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8529 9057 . + . ID=id-GGE_1620;Dbxref=InterPro:IPR000711;Note=superfamily~HMMPanther:PTHR11910~family not named~atpase%2C f1 complex%2C oscp/delta subunit%3B label: ATP-synt_B superfamily;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8535 8844 . + . ID=id-GGE_1620-2;Dbxref=InterPro:IPR000711;Note=superfamily:SSF47928~n-terminal domain of the delta subunit of the f1f0-atp synthase~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8535 8838 . + . ID=id-GGE_1620-3;Dbxref=InterPro:IPR000711;Note=Gene3D:1.10.520.20~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8538 9054 . + . ID=id-GGE_1620-4;Dbxref=InterPro:IPR000711;Note=HAMAP:MF_01416~atp_synth_delta_bact~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8550 9036 . + . ID=id-GGE_1620-5;Dbxref=InterPro:IPR000711,PFAM:PF00213,TIGRFAM:TIGR01145;Note=multi-dom~atp_synt_delta: atp synthase f1%2C delta~atpase%2C f1 complex%2C oscp/delta subunit~oscp~atpase%2C f1 complex%2C oscp/delta subunit%3B label: OSCP;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8550 8589 . + . ID=id-GGE_1620-6;Dbxref=InterPro:IPR000711;Note=FPrintScan:PR00125~atpasedelta~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8592 8601 . + . ID=id-GGE_1620-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=atpH;locus_tag=GGE_1620 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8565 8805 . - . ID=id-AFQR01000030.1:8565..8805;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8565 8751 . - . ID=id-AFQR01000030.1:8565..8751;Dbxref=InterPro:IPR000711;Note=FPrintScan:PR00125~atpasedelta~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8574 8784 . - . ID=id-AFQR01000030.1:8574..8784;Dbxref=InterPro:IPR000711;Note=FPrintScan:PR00125~atpasedelta~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8577 8934 . - . ID=id-AFQR01000030.1:8577..8934;Dbxref=InterPro:IPR000711;Note=FPrintScan:PR00125~atpasedelta~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8586 8979 . - . ID=id-AFQR01000030.1:8586..8979;Dbxref=InterPro:IPR000711;Note=FPrintScan:PR00125~atpasedelta~atpase%2C f1 complex%2C oscp/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 8589 8940 . - . ID=id-AFQR01000030.1:8589..8940;Dbxref=InterPro:IPR020781;Note=PatternScan:PS00389~atpase_delta~atpase%2C f1 complex%2C oscp/delta subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 9075 10616 . + . ID=gene-GGE_1621;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank CDS 9075 10616 . + 0 ID=cds-EGT80365.1;Parent=gene-GGE_1621;Dbxref=GeneID:166201666,InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR004100,InterPro:IPR005294,InterPro:IPR018118,InterPro:IPR020003,InterPro:IPR023366,PFAM:PF00006,PFAM:PF00306,PFAM:PF02874,TIGRFAM:TIGR00962,NCBI_GP:EGT80365.1;Name=EGT80365.1;Ontology_term=GO:0015991,GO:0046034,GO:0015986,GO:0015992,GO:0045261,GO:0033178,GO:0016469,GO:0005524,GO:0046933,GO:0016820,GO:0046961;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex catalytic core F(1)|0045261||,proton-transporting two-sector ATPase complex catalytic domain|0033178||,proton-transporting two-sector ATPase complex|0016469||;go_function=ATP binding|0005524||,hydrogen ion transporting ATP synthase activity rotational mechanism|0046933||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,proton-transporting ATPase activity rotational mechanism|0046961||;go_process=ATP hydrolysis coupled proton transport|0015991||,ATP metabolic process|0046034||,ATP synthesis coupled proton transport|0015986||,proton transport|0015992||;locus_tag=GGE_1621;product=ATP synthase subunit alpha;protein_id=EGT80365.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9075 10611 . + . ID=id-GGE_1621;Dbxref=InterPro:IPR005294;Note=HAMAP:MF_01346~atp_synth_alpha_bact~atpase%2C f1 complex%2C alpha subunit;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9075 10605 . + . ID=id-GGE_1621-2;Dbxref=InterPro:IPR005294;Note=multi-dom~HMMPanther:PTHR15184:SF3~atp synthase alpha subunit mitochondrial~atpase%2C f1 complex%2C alpha subunit~HMMPanther:PTHR15184~family not named%3B label: PRK09281;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9081 10611 . + . ID=id-GGE_1621-3;Dbxref=InterPro:IPR005294,TIGRFAM:TIGR00962;Note=atpa: atp synthase f1%2C alpha subunit~atpase%2C f1 complex%2C alpha subunit;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9102 9333 . + . ID=id-GGE_1621-4;Dbxref=InterPro:IPR018118;Note=superfamily:SSF50615~n-terminal domain of alpha and beta subunits of f1 atp synthase~atpase%2C f1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9150 9282 . + . ID=id-GGE_1621-5;Dbxref=InterPro:IPR023366;Note=Gene3D:2.40.30.20~atpase%2C f1/a1 complex%2C alpha subunit;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9153 9276 . + . ID=id-GGE_1621-6;Dbxref=InterPro:IPR004100,PFAM:PF02874;Note=superfamily~atp-synt_ab_n~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit%3B label: ATP-synt_ab_N superfamily;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9357 9942 . + . ID=id-GGE_1621-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9360 9939 . + . ID=id-GGE_1621-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9414 9873 . + . ID=id-GGE_1621-9;Note=specific~superfamily%3B label: F1_ATPase_alpha;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9519 9759 . + . ID=id-GGE_1621-10;Dbxref=InterPro:IPR000194,PFAM:PF00006;Note=atp-synt_ab~atpase%2C alpha/beta subunit%2C nucleotide-binding domain;gbkey=misc_feature;gene=atpA;locus_tag=GGE_1621 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9102 9750 . - . ID=id-AFQR01000030.1:9102..9750;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9105 10173 . - . ID=id-AFQR01000030.1:9105..10173;Dbxref=InterPro:IPR020003;Note=PatternScan:PS00152~atpase_alpha_beta~atpase%2C alpha/beta subunit%2C nucleotide-binding domain%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9129 9360 . - . ID=id-AFQR01000030.1:9129..9360;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9360 10236 . - . ID=id-AFQR01000030.1:9360..10236;Dbxref=InterPro:IPR000793,PFAM:PF00306;Note=atp-synt_ab_c~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9381 10236 . - . ID=id-AFQR01000030.1:9381..10236;Note=superfamily%3B label: ATP-synt_ab_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9459 10224 . - . ID=id-AFQR01000030.1:9459..10224;Note=Gene3D:1.20.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 9468 10224 . - . ID=id-AFQR01000030.1:9468..10224;Dbxref=InterPro:IPR000793;Note=superfamily:SSF47917~c-terminal domain of alpha and beta subunits of f1 atp synthase~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10478 10487 . - . ID=id-AFQR01000030.1:10478..10487;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 10632 11501 . + . ID=gene-GGE_1622;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=GGE_1622 GCA_000222085.2|AFQR01000030.1 Genbank CDS 10632 11501 . + 0 ID=cds-EGT80366.1;Parent=gene-GGE_1622;Dbxref=GeneID:1168597,InterPro:IPR000131,PFAM:PF00231,TIGRFAM:TIGR01146,NCBI_GP:EGT80366.1;Name=EGT80366.1;Ontology_term=GO:0015986,GO:0045261,GO:0046933,GO:0046961;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex catalytic core F(1)|0045261||;go_function=hydrogen ion transporting ATP synthase activity rotational mechanism|0046933||,proton-transporting ATPase activity rotational mechanism|0046961||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1622;product=ATP synthase gamma chain;protein_id=EGT80366.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10632 11499 . + . ID=id-GGE_1622;Dbxref=InterPro:IPR000131,TIGRFAM:TIGR01146;Note=superfamily~atpsyn_f1gamma: atp synthase f1%2C gamma~atpase%2C f1 complex%2C gamma subunit~HAMAP:MF_00815~atp_synth_gamma_bact~atpase%2C f1 complex%2C gamma subunit~HMMPanther:PTHR11693:SF10~atp synthase gamma chain%2C sodium ion specific~HMMPanther:PTHR11693~family not named~atpase%2C f1 complex%2C gamma subunit%3B label: ATP-synt superfamily;gbkey=misc_feature;gene=atpG;locus_tag=GGE_1622 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10641 11490 . + . ID=id-GGE_1622-2;Dbxref=InterPro:IPR000131,PFAM:PF00231;Note=atp-synt~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature;gene=atpG;locus_tag=GGE_1622 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10647 11487 . + . ID=id-GGE_1622-3;Dbxref=InterPro:IPR000131;Note=superfamily:SSF52943~atp synthase (f1-atpase)%2C gamma subunit~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature;gene=atpG;locus_tag=GGE_1622 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10821 11019 . + . ID=id-GGE_1622-4;Note=Gene3D:3.40.1380.10;gbkey=misc_feature;gene=atpG;locus_tag=GGE_1622 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10674 11457 . - . ID=id-AFQR01000030.1:10674..11457;Dbxref=InterPro:IPR000131;Note=PatternScan:PS00153~atpase_gamma~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10686 11130 . - . ID=id-AFQR01000030.1:10686..11130;Dbxref=InterPro:IPR000131;Note=FPrintScan:PR00126~atpasegamma~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10692 11340 . - . ID=id-AFQR01000030.1:10692..11340;Dbxref=InterPro:IPR000131;Note=FPrintScan:PR00126~atpasegamma~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10692 10851 . - . ID=id-AFQR01000030.1:10692..10851;Dbxref=InterPro:IPR000131;Note=FPrintScan:PR00126~atpasegamma~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10698 11433 . - . ID=id-AFQR01000030.1:10698..11433;Dbxref=InterPro:IPR000131;Note=FPrintScan:PR00126~atpasegamma~atpase%2C f1 complex%2C gamma subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10737 11241 . - . ID=id-AFQR01000030.1:10737..11241;Note=Gene3D:1.10.287.80;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 10773 11346 . - . ID=id-AFQR01000030.1:10773..11346;Note=Gene3D:1.10.287.80;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 11518 12891 . + . ID=gene-GGE_1623;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank CDS 11518 12891 . + 0 ID=cds-EGT80367.1;Parent=gene-GGE_1623;Dbxref=GeneID:166201709,InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR004100,InterPro:IPR005722,InterPro:IPR018118,InterPro:IPR020003,PFAM:PF00006,PFAM:PF00306,PFAM:PF02874,TIGRFAM:TIGR01039,NCBI_GP:EGT80367.1;Name=EGT80367.1;Ontology_term=GO:0015991,GO:0046034,GO:0015986,GO:0015992,GO:0045261,GO:0033178,GO:0016469,GO:0005524,GO:0046933,GO:0008553,GO:0016820,GO:0046961;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex catalytic core F(1)|0045261||,proton-transporting two-sector ATPase complex catalytic domain|0033178||,proton-transporting two-sector ATPase complex|0016469||;go_function=ATP binding|0005524||,hydrogen ion transporting ATP synthase activity rotational mechanism|0046933||,hydrogen-exporting ATPase activity phosphorylative mechanism|0008553||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,proton-transporting ATPase activity rotational mechanism|0046961||;go_process=ATP hydrolysis coupled proton transport|0015991||,ATP metabolic process|0046034||,ATP synthesis coupled proton transport|0015986||,proton transport|0015992||;locus_tag=GGE_1623;product=ATP synthase subunit beta;protein_id=EGT80367.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11518 12889 . + . ID=id-GGE_1623;Dbxref=InterPro:IPR005722;Note=multi-dom~HAMAP:MF_01347~atp_synth_beta_bact~atpase%2C f1 complex%2C beta subunit~HMMPanther:PTHR15184:SF8~atp synthase beta subunit~atpase%2C f1 complex%2C beta subunit~HMMPanther:PTHR15184~family not named%3B label: PRK09280;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11518 11734 . + . ID=id-GGE_1623-2;Dbxref=InterPro:IPR018118;Note=superfamily:SSF50615~n-terminal domain of alpha and beta subunits of f1 atp synthase~atpase%2C f1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11524 12886 . + . ID=id-GGE_1623-3;Dbxref=InterPro:IPR005722,TIGRFAM:TIGR01039;Note=atpd: atp synthase f1%2C beta subunit~atpase%2C f1 complex%2C beta subunit;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11524 11731 . + . ID=id-GGE_1623-4;Note=Gene3D:2.40.10.170;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11536 11713 . + . ID=id-GGE_1623-5;Dbxref=InterPro:IPR004100,PFAM:PF02874;Note=superfamily~atp-synt_ab_n~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit%3B label: ATP-synt_ab_N superfamily;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11734 12337 . + . ID=id-GGE_1623-6;Note=specific~superfamily%3B label: F1-ATPase_beta;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11737 12340 . + . ID=id-GGE_1623-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11740 12319 . + . ID=id-GGE_1623-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11896 12160 . + . ID=id-GGE_1623-9;Dbxref=InterPro:IPR000194,PFAM:PF00006;Note=atp-synt_ab~atpase%2C alpha/beta subunit%2C nucleotide-binding domain;gbkey=misc_feature;gene=atpD;locus_tag=GGE_1623 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11548 12508 . - . ID=id-AFQR01000030.1:11548..12508;Dbxref=InterPro:IPR020003;Note=PatternScan:PS00152~atpase_alpha_beta~atpase%2C alpha/beta subunit%2C nucleotide-binding domain%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11566 11929 . - . ID=id-AFQR01000030.1:11566..11929;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11824 12577 . - . ID=id-AFQR01000030.1:11824..12577;Dbxref=InterPro:IPR000793,PFAM:PF00306;Note=atp-synt_ab_c~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11836 12574 . - . ID=id-AFQR01000030.1:11836..12574;Note=superfamily%3B label: ATP-synt_ab_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 11866 12544 . - . ID=id-AFQR01000030.1:11866..12544;Dbxref=InterPro:IPR000793;Note=Gene3D:1.10.1140.10~superfamily:SSF47917~c-terminal domain of alpha and beta subunits of f1 atp synthase~atpase%2C f1/v1/a1 complex%2C alpha/beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 12922 13350 . + . ID=gene-GGE_1624;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank CDS 12922 13350 . + 0 ID=cds-EGT80368.1;Parent=gene-GGE_1624;Dbxref=GeneID:1168590,InterPro:IPR001469,InterPro:IPR020546,InterPro:IPR020547,PFAM:PF02823,TIGRFAM:TIGR01216,NCBI_GP:EGT80368.1;Name=EGT80368.1;Ontology_term=GO:0015986,GO:0045261,GO:0046933,GO:0046961;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex catalytic core F(1)|0045261||;go_function=hydrogen ion transporting ATP synthase activity rotational mechanism|0046933||,proton-transporting ATPase activity rotational mechanism|0046961||;go_process=ATP synthesis coupled proton transport|0015986||;locus_tag=GGE_1624;product=ATP synthase epsilon chain;protein_id=EGT80368.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12922 13330 . + . ID=id-GGE_1624;Dbxref=InterPro:IPR001469;Note=HMMPanther:PTHR13822:SF2~atp synthase epsilon chain~HMMPanther:PTHR13822~family not named~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12922 13324 . + . ID=id-GGE_1624-2;Note=multi-dom%3B label: atpC;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12922 13189 . + . ID=id-GGE_1624-3;Dbxref=InterPro:IPR020546;Note=Gene3D:2.60.15.10~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12928 13312 . + . ID=id-GGE_1624-4;Dbxref=InterPro:IPR001469;Note=HAMAP:MF_00530~atp_synth_epsil_bac~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12928 13177 . + . ID=id-GGE_1624-5;Dbxref=InterPro:IPR020546;Note=superfamily:SSF51344~epsilon subunit of f1f0-atp synthase n-terminal domain~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12931 13312 . + . ID=id-GGE_1624-6;Dbxref=InterPro:IPR001469,TIGRFAM:TIGR01216;Note=atp_synt_epsi: atp synthase f1%2C epsilon~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12934 13162 . + . ID=id-GGE_1624-7;Dbxref=InterPro:IPR020546,PFAM:PF02823;Note=superfamily~atp-synt_de_n~atpase%2C f1 complex%2C delta/epsilon subunit%3B label: ATP-synt_DE_N superfamily;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12949 13165 . + . ID=id-GGE_1624-8;Dbxref=InterPro:IPR020546;Note=BlastProDom:PD000944~atpe_haein_p43718~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature;gene=atpC;locus_tag=GGE_1624 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 12988 13174 . - . ID=id-AFQR01000030.1:12988..13174;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13051 13192 . - . ID=id-AFQR01000030.1:13051..13192;Dbxref=InterPro:IPR020547;Note=Gene3D:1.20.5.440~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13072 13183 . - . ID=id-AFQR01000030.1:13072..13183;Dbxref=InterPro:IPR020547;Note=superfamily:SSF46604~epsilon subunit of f1f0-atp synthase c-terminal domain~atpase%2C f1 complex%2C delta/epsilon subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13355 13364 . + . ID=id-AFQR01000030.1:13355..13364;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13373 13382 . - . ID=id-AFQR01000030.1:13373..13382;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13432 13621 . - . ID=id-AFQR01000030.1:13432..13621;Note=Gene3D:3.30.565.40;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13546 13759 . - . ID=id-AFQR01000030.1:13546..13759;Note=superfamily%3B label: DUF3298 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13549 13756 . - . ID=id-AFQR01000030.1:13549..13756;Dbxref=InterPro:IPR021729,PFAM:PF11738;Note=duf3298~domain of unknown function duf3298;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13657 13657 . + . ID=id-AFQR01000030.1:13657..13657;Dbxref=InterPro:IPR021729;Note=Gene3D:3.90.640.20~domain of unknown function duf3298;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 13979 14257 . - . ID=gene-GGE_1625;Name=GGE_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1625 GCA_000222085.2|AFQR01000030.1 Genbank CDS 13979 14257 . - 0 ID=cds-EGT80369.1;Parent=gene-GGE_1625;Dbxref=NCBI_GP:EGT80369.1;Name=EGT80369.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_1625;product=putative lipoprotein;protein_id=EGT80369.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13979 14036 . - . ID=id-GGE_1625;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1625 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 13994 14015 . - . ID=id-GGE_1625-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1625 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14042 14087 . - . ID=id-GGE_1625-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1625 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14030 14165 . + . ID=id-AFQR01000030.1:14030..14165;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 14276 16135 . - . ID=gene-GGE_1626;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank CDS 14276 16135 . - 0 ID=cds-EGT80370.1;Parent=gene-GGE_1626;Dbxref=GeneID:1173423,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004535,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR011991,InterPro:IPR015190,InterPro:IPR015191,PFAM:PF00009,PFAM:PF03144,PFAM:PF09106,PFAM:PF09107,TIGRFAM:TIGR00231,TIGRFAM:TIGR00475,NCBI_GP:EGT80370.1;Name=EGT80370.1;Ontology_term=GO:0001514,GO:0005737,GO:0005525,GO:0003924,GO:0003723,GO:0003746;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||;go_function=GTP binding|0005525||,GTPase activity|0003924||,RNA binding|0003723||,translation elongation factor activity|0003746||;go_process=selenocysteine incorporation|0001514||;locus_tag=GGE_1626;product=Selenocysteine-specific elongation factor;protein_id=EGT80370.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14276 16115 . - . ID=id-GGE_1626;Dbxref=InterPro:IPR004535,TIGRFAM:TIGR00475;Note=multi-dom~selb: selenocysteine-specific translation e~translation elongation factor%2C selenocysteine-specific%3B label: selB;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14276 16046 . - . ID=id-GGE_1626-2;Note=HMMPanther:PTHR23115:SF39~elongation factor selb~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14276 14834 . - . ID=id-GGE_1626-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14276 14759 . - . ID=id-GGE_1626-4;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14276 14756 . - . ID=id-GGE_1626-5;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14282 14753 . - . ID=id-GGE_1626-6;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14285 14750 . - . ID=id-GGE_1626-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=selB;locus_tag=GGE_1626 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14315 15344 . + . ID=id-AFQR01000030.1:14315..15344;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14426 15965 . + . ID=id-AFQR01000030.1:14426..15965;Dbxref=InterPro:IPR015191,PFAM:PF09107;Note=superfamily~selb-wing_3~translation elongation factor selb%2C winged helix%2C type 3%3B label: SelB-wing_3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14450 15941 . + . ID=id-AFQR01000030.1:14450..15941;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14450 15554 . + . ID=id-AFQR01000030.1:14450..15554;Dbxref=InterPro:IPR015190,PFAM:PF09106;Note=superfamily~selb-wing_2~translation elongation factor selb%2C winged helix%2C type 2%3B label: SelB-wing_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14456 15941 . + . ID=id-AFQR01000030.1:14456..15941;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14468 15746 . + . ID=id-AFQR01000030.1:14468..15746;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14477 14831 . + . ID=id-AFQR01000030.1:14477..14831;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14480 15527 . + . ID=id-AFQR01000030.1:14480..15527;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14495 15527 . + . ID=id-AFQR01000030.1:14495..15527;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14525 14789 . + . ID=id-AFQR01000030.1:14525..14789;Note=specific~superfamily%3B label: selB_II;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14531 15704 . + . ID=id-AFQR01000030.1:14531..15704;Note=superfamily%3B label: DEP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14558 15017 . + . ID=id-AFQR01000030.1:14558..15017;Note=specific~superfamily%3B label: selB_III;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14651 14774 . + . ID=id-AFQR01000030.1:14651..14774;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 14654 14777 . + . ID=id-AFQR01000030.1:14654..14777;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 15215 15224 . + . ID=id-AFQR01000030.1:15215..15224;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 16132 17517 . - . ID=gene-GGE_1627;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank CDS 16132 17517 . - 0 ID=cds-EGT80371.1;Parent=gene-GGE_1627;Dbxref=GeneID:1173422,InterPro:IPR004534,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR018319,PFAM:PF03841,PFAM:PF12390,TIGRFAM:TIGR00474,NCBI_GP:EGT80371.1;Name=EGT80371.1;Ontology_term=GO:0001514,GO:0005737,GO:0004125,GO:0003824,GO:0030170;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||;go_function=L-seryl-tRNASec selenium transferase activity|0004125||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=selenocysteine incorporation|0001514||;locus_tag=GGE_1627;product=L-seryl-tRNASec selenium transferase;protein_id=EGT80371.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16132 17515 . - . ID=id-GGE_1627;Dbxref=InterPro:IPR004534;Note=multi-dom~HAMAP:MF_00423~sela~l-seryl-trna selenium transferase%3B label: PRK04311;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16132 17074 . - . ID=id-GGE_1627-2;Note=HMMPanther:PTHR11601:SF4~l-seryl-trna(sec) selenium transferase~HMMPanther:PTHR11601~family not named;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16147 17500 . - . ID=id-GGE_1627-3;Dbxref=InterPro:IPR004534,TIGRFAM:TIGR00474;Note=sela: l-seryl-trna selenium transferase~l-seryl-trna selenium transferase;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16147 16252 . - . ID=id-GGE_1627-4;Dbxref=PFAM:PF12390;Note=superfamily~se-cys_synth_n%3B label: Se-cys_synth_N superfamily;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16342 17308 . - . ID=id-GGE_1627-5;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16378 17236 . - . ID=id-GGE_1627-6;Note=superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16378 17233 . - . ID=id-GGE_1627-7;Dbxref=InterPro:IPR018319,PFAM:PF03841;Note=sela~pyridoxal phosphate-dependent transferase;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16531 16729 . - . ID=id-GGE_1627-8;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=selA;locus_tag=GGE_1627 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 16198 17212 . + . ID=id-AFQR01000030.1:16198..17212;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 17326 17335 . + . ID=id-AFQR01000030.1:17326..17335;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 17504 17513 . + . ID=id-AFQR01000030.1:17504..17513;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 17959 19221 . + . ID=gene-GGE_1628;Name=GGE_1628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1628 GCA_000222085.2|AFQR01000030.1 Genbank CDS 17959 19221 . + 0 ID=cds-EGT80372.1;Parent=gene-GGE_1628;Dbxref=GeneID:145641946,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT80372.1;Name=EGT80372.1;Note=ZP_01797519;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1628;product=SlpA;protein_id=EGT80372.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 17977 19204 . + . ID=id-GGE_1628;Note=multi-dom%3B label: PRK09692;gbkey=misc_feature;locus_tag=GGE_1628 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18064 19081 . + . ID=id-GGE_1628-2;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1628 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18244 18286 . - . ID=id-AFQR01000030.1:18244..18286;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18277 18286 . - . ID=id-AFQR01000030.1:18277..18286;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18409 18697 . - . ID=id-AFQR01000030.1:18409..18697;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18502 18622 . - . ID=id-AFQR01000030.1:18502..18622;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 18523 18610 . - . ID=id-AFQR01000030.1:18523..18610;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 19715 19922 . - . ID=id-AFQR01000030.1:19715..19922;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 20490 20693 . + . ID=gene-GGE_1629;Name=GGE_1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1629 GCA_000222085.2|AFQR01000030.1 Genbank CDS 20490 20693 . + 0 ID=cds-EGT80373.1;Parent=gene-GGE_1629;Dbxref=GeneID:145641949,InterPro:IPR010260,PFAM:PF05930,NCBI_GP:EGT80373.1;Name=EGT80373.1;Note=ZP_01797522;gbkey=CDS;locus_tag=GGE_1629;product=putative prophage CP4-57 regulatory;protein_id=EGT80373.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 20523 20640 . + . ID=id-GGE_1629;Dbxref=InterPro:IPR010260,PFAM:PF05930;Note=superfamily~phage_alpa~prophage cp4-57 regulatory%3B label: Phage_AlpA superfamily;gbkey=misc_feature;locus_tag=GGE_1629 GCA_000222085.2|AFQR01000030.1 Genbank gene 20703 20963 . + . ID=gene-GGE_1630;Name=GGE_1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1630 GCA_000222085.2|AFQR01000030.1 Genbank CDS 20703 20963 . + 0 ID=cds-EGT80374.1;Parent=gene-GGE_1630;Dbxref=GeneID:319776175,NCBI_GP:EGT80374.1;Name=EGT80374.1;Note=YP_004138663~HICON_15260;gbkey=CDS;locus_tag=GGE_1630;product=Hypothetical protein;protein_id=EGT80374.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank gene 20979 21290 . + . ID=gene-GGE_1631;Name=GGE_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1631 GCA_000222085.2|AFQR01000030.1 Genbank CDS 20979 21290 . + 0 ID=cds-EGT80375.1;Parent=gene-GGE_1631;Dbxref=GeneID:145634379,NCBI_GP:EGT80375.1;Name=EGT80375.1;Note=ZP_01790089~CGSHiAA_06299;gbkey=CDS;locus_tag=GGE_1631;product=Hypothetical protein;protein_id=EGT80375.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank gene 21309 21728 . + . ID=gene-GGE_1632;Name=GGE_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1632 GCA_000222085.2|AFQR01000030.1 Genbank CDS 21309 21728 . + 0 ID=cds-EGT80376.1;Parent=gene-GGE_1632;Dbxref=GeneID:319776172,InterPro:IPR005335,PFAM:PF03592,NCBI_GP:EGT80376.1;Name=EGT80376.1;Note=YP_004138660;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_1632;product=putative terminase small subunit;protein_id=EGT80376.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 21324 21564 . + . ID=id-GGE_1632;Dbxref=InterPro:IPR005335,PFAM:PF03592;Note=superfamily~terminase_2~terminase small subunit%3B label: Terminase_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1632 GCA_000222085.2|AFQR01000030.1 Genbank gene 21728 22030 . + . ID=gene-GGE_1633;Name=GGE_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1633 GCA_000222085.2|AFQR01000030.1 Genbank CDS 21728 22030 . + 0 ID=cds-EGT80377.1;Parent=gene-GGE_1633;Dbxref=GeneID:319776171,NCBI_GP:EGT80377.1;Name=EGT80377.1;Note=YP_004138659~HICON_15220;gbkey=CDS;locus_tag=GGE_1633;product=Hypothetical protein;protein_id=EGT80377.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 21794 21863 . - . ID=id-AFQR01000030.1:21794..21863;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank gene 22020 22793 . + . ID=gene-GGE_1634;Name=GGE_1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1634 GCA_000222085.2|AFQR01000030.1 Genbank CDS 22020 22793 . + 0 ID=cds-EGT80378.1;Parent=gene-GGE_1634;Dbxref=GeneID:145641955,InterPro:IPR013557,PFAM:PF08346,NCBI_GP:EGT80378.1;Name=EGT80378.1;Note=ZP_01797528;gbkey=CDS;locus_tag=GGE_1634;product=putative anti-repressor protein;protein_id=EGT80378.1;transl_table=11 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 22128 22266 . + . ID=id-GGE_1634;Dbxref=InterPro:IPR013557,PFAM:PF08346;Note=superfamily~anta~anta/antb antirepressor%3B label: AntA superfamily;gbkey=misc_feature;locus_tag=GGE_1634 GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 22059 22677 . - . ID=id-AFQR01000030.1:22059..22677;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000030.1 Genbank sequence_feature 23032 23041 . + . ID=id-AFQR01000030.1:23032..23041;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000029.1 1 15970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000029.1 Genbank region 1 15970 . + . ID=AFQR01000029.1:1..15970;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 319 1693 . - . ID=id-AFQR01000029.1:319..1693;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 322 2764 . - . ID=id-AFQR01000029.1:322..2764;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 340 1252 . - . ID=id-AFQR01000029.1:340..1252;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 340 394 . - . ID=id-AFQR01000029.1:340..394;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 706 1924 . - . ID=id-AFQR01000029.1:706..1924;Note=multi-dom%3B label: PRK13878;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 841 1693 . - . ID=id-AFQR01000029.1:841..1693;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 844 2764 . - . ID=id-AFQR01000029.1:844..2764;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 862 1252 . - . ID=id-AFQR01000029.1:862..1252;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 1228 1924 . - . ID=id-AFQR01000029.1:1228..1924;Note=multi-dom%3B label: PRK13878;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 2494 2503 . + . ID=id-AFQR01000029.1:2494..2503;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 2938 3076 . - . ID=id-AFQR01000029.1:2938..3076;Note=superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 2947 3109 . - . ID=id-AFQR01000029.1:2947..3109;Note=Gene3D:3.40.50.140;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 2974 3082 . + . ID=id-AFQR01000029.1:2974..3082;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 3283 3708 . - . ID=gene-GGE_1596;Name=GGE_1596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank CDS 3283 3708 . - 0 ID=cds-EGT80717.1;Parent=gene-GGE_1596;Dbxref=GeneID:21628947,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,TIGRFAM:TIGR00621,NCBI_GP:EGT80717.1;Name=EGT80717.1;Note=NP_660240;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||;go_process=DNA replication|0006260||;locus_tag=GGE_1596;product=single-strand DNA binding helix-destabilizing protein;protein_id=EGT80717.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3283 3706 . - . ID=id-GGE_1596;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3283 3607 . - . ID=id-GGE_1596-2;Dbxref=InterPro:IPR011344;Note=HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3292 3700 . - . ID=id-GGE_1596-3;Dbxref=InterPro:IPR011344,TIGRFAM:TIGR00621;Note=ssb: single-strand binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3295 3697 . - . ID=id-GGE_1596-4;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3298 3598 . - . ID=id-GGE_1596-5;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3298 3319 . - . ID=id-GGE_1596-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3301 3589 . - . ID=id-GGE_1596-7;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3334 3535 . - . ID=id-GGE_1596-8;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;locus_tag=GGE_1596 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3313 3373 . + . ID=id-AFQR01000029.1:3313..3373;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3331 3586 . + . ID=id-AFQR01000029.1:3331..3586;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 3869 4525 . - . ID=gene-GGE_1597;Name=GGE_1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1597 GCA_000222085.2|AFQR01000029.1 Genbank CDS 3869 4525 . - 0 ID=cds-EGT80718.1;Parent=gene-GGE_1597;Dbxref=GeneID:21628946,InterPro:IPR009989,PFAM:PF07424,NCBI_GP:EGT80718.1;Name=EGT80718.1;Note=NP_660239;gbkey=CDS;locus_tag=GGE_1597;product=YggA-like protein;protein_id=EGT80718.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3890 3923 . - . ID=id-GGE_1597;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1597 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3908 4439 . - . ID=id-GGE_1597-2;Note=superfamily%3B label: TrbM superfamily;gbkey=misc_feature;locus_tag=GGE_1597 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 3908 4433 . - . ID=id-GGE_1597-3;Dbxref=InterPro:IPR009989,PFAM:PF07424;Note=trbm~trbm;gbkey=misc_feature;locus_tag=GGE_1597 GCA_000222085.2|AFQR01000029.1 Genbank gene 4536 6368 . - . ID=gene-GGE_1598;Name=GGE_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank CDS 4536 6368 . - 0 ID=cds-EGT80719.1;Parent=gene-GGE_1598;Dbxref=GeneID:71558981,InterPro:IPR003688,PFAM:PF02534,NCBI_GP:EGT80719.1;Name=EGT80719.1;Note=YP_271715;Ontology_term=GO:0009291,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=unidirectional conjugation|0009291||;locus_tag=GGE_1598;product=TraK/VirD4-like protein;protein_id=EGT80719.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4557 4584 . - . ID=id-GGE_1598;Note=seg;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4566 4605 . - . ID=id-GGE_1598-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4815 6045 . - . ID=id-GGE_1598-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4857 5994 . - . ID=id-GGE_1598-4;Note=multi-dom%3B label: TraG;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4860 5994 . - . ID=id-GGE_1598-5;Dbxref=InterPro:IPR003688,PFAM:PF02534;Note=trag~ti-type conjugative transfer system%2C trag-like;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4989 5742 . - . ID=id-GGE_1598-6;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1598 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 4605 4746 . + . ID=id-AFQR01000029.1:4605..4746;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 5184 5664 . + . ID=id-AFQR01000029.1:5184..5664;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 6378 7439 . - . ID=gene-GGE_1599;Name=GGE_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank CDS 6378 7439 . - 0 ID=cds-EGT80720.1;Parent=gene-GGE_1599;Dbxref=GeneID:21628944,InterPro:IPR001482,InterPro:IPR014155,PFAM:PF00437,TIGRFAM:TIGR02788,NCBI_GP:EGT80720.1;Name=EGT80720.1;Note=NP_660237;Ontology_term=GO:0009405,GO:0006810,GO:0005737,GO:0005622,GO:0005524;gbkey=CDS;go_component=cytoplasm|0005737||,intracellular|0005622||;go_function=ATP binding|0005524||;go_process=pathogenesis|0009405||,transport|0006810||;locus_tag=GGE_1599;product=TraJ-like protein;protein_id=EGT80720.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6435 7314 . - . ID=id-GGE_1599;Dbxref=InterPro:IPR001482,PFAM:PF00437;Note=gspii_e~type ii secretion system protein e;gbkey=misc_feature;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6459 6672 . - . ID=id-GGE_1599-2;Note=Gene3D:3.30.450.90;gbkey=misc_feature;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6465 7296 . - . ID=id-GGE_1599-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6474 7311 . - . ID=id-GGE_1599-4;Dbxref=InterPro:IPR014155,TIGRFAM:TIGR02788;Note=multi-dom~virb11: p-type dna transfer atpase virb11~atpase%2C p-type dna transfer%2C virb11%3B label: VirB11;gbkey=misc_feature;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6882 6885 . - . ID=id-GGE_1599-5;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1599 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 6873 6885 . + . ID=id-AFQR01000029.1:6873..6885;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 7454 8641 . - . ID=gene-GGE_1600;Name=GGE_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1600 GCA_000222085.2|AFQR01000029.1 Genbank CDS 7454 8641 . - 0 ID=cds-EGT80721.1;Parent=gene-GGE_1600;Dbxref=GeneID:71558979,InterPro:IPR005498,PFAM:PF03743,NCBI_GP:EGT80721.1;Name=EGT80721.1;Note=YP_271713;gbkey=CDS;locus_tag=GGE_1600;product=TraF/VirB10-like protein;protein_id=EGT80721.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 7523 7553 . + . ID=id-AFQR01000029.1:7523..7553;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 7577 7733 . + . ID=id-AFQR01000029.1:7577..7733;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 7610 7709 . + . ID=id-AFQR01000029.1:7610..7709;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 7988 8081 . + . ID=id-AFQR01000029.1:7988..8081;Dbxref=InterPro:IPR005498,PFAM:PF03743;Note=trbi~type iv secretion system%2C virb10 / trab / trbi;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 7991 8078 . + . ID=id-AFQR01000029.1:7991..8078;Note=superfamily%3B label: TrbI superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 8634 9410 . - . ID=gene-GGE_1601;Name=GGE_1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1601 GCA_000222085.2|AFQR01000029.1 Genbank CDS 8634 9410 . - 0 ID=cds-EGT80722.1;Parent=gene-GGE_1601;Dbxref=GeneID:21628942,InterPro:IPR010258,PFAM:PF03524,NCBI_GP:EGT80722.1;Name=EGT80722.1;Note=NP_660235;gbkey=CDS;locus_tag=GGE_1601;product=TraH-like protein;protein_id=EGT80722.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 8727 9249 . - . ID=id-GGE_1601;Dbxref=InterPro:IPR010258,PFAM:PF03524;Note=cagx~conjugal transfer%2C trbg/virb9/cagx;gbkey=misc_feature;locus_tag=GGE_1601 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 8898 9084 . + . ID=id-AFQR01000029.1:8898..9084;Note=specific~superfamily%3B label: VirB9_CagX_TrbG;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 9417 10199 . - . ID=gene-GGE_1602;Name=GGE_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1602 GCA_000222085.2|AFQR01000029.1 Genbank CDS 9417 10199 . - 0 ID=cds-EGT80723.1;Parent=gene-GGE_1602;Dbxref=GeneID:21628941,InterPro:IPR007430,PFAM:PF04335,NCBI_GP:EGT80723.1;Name=EGT80723.1;Note=NP_660234;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1602;product=TraG-like protein;protein_id=EGT80723.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 9543 10047 . - . ID=id-GGE_1602;Dbxref=InterPro:IPR007430,PFAM:PF04335;Note=virb8~virb8;gbkey=misc_feature;locus_tag=GGE_1602 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 9546 10044 . - . ID=id-GGE_1602-2;Note=superfamily%3B label: VirB8 superfamily;gbkey=misc_feature;locus_tag=GGE_1602 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 9486 9594 . + . ID=id-AFQR01000029.1:9486..9594;Note=transmembrane_regions~seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 10381 11364 . - . ID=gene-GGE_1603;Name=GGE_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1603 GCA_000222085.2|AFQR01000029.1 Genbank CDS 10381 11364 . - 0 ID=cds-EGT80724.1;Parent=gene-GGE_1603;Dbxref=GeneID:21628939,InterPro:IPR007688,PFAM:PF04610,NCBI_GP:EGT80724.1;Name=EGT80724.1;Note=NP_660232;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||;locus_tag=GGE_1603;product=TraA-like protein;protein_id=EGT80724.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10498 11050 . - . ID=id-GGE_1603;Dbxref=InterPro:IPR007688,PFAM:PF04610;Note=trbl~conjugal transfer%2C trbl/virb6;gbkey=misc_feature;locus_tag=GGE_1603 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10528 10906 . - . ID=id-GGE_1603-2;Note=superfamily%3B label: TrbL superfamily;gbkey=misc_feature;locus_tag=GGE_1603 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10420 11098 . + . ID=id-AFQR01000029.1:10420..11098;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10426 10480 . + . ID=id-AFQR01000029.1:10426..10480;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 11080 . + . ID=id-AFQR01000029.1:10450..11080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 10975 . + . ID=id-AFQR01000029.1:10450..10975;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 10879 . + . ID=id-AFQR01000029.1:10450..10879;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 10798 . + . ID=id-AFQR01000029.1:10450..10798;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 10561 . + . ID=id-AFQR01000029.1:10450..10561;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 10450 10456 . + . ID=id-AFQR01000029.1:10450..10456;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 11378 12067 . - . ID=gene-GGE_1604;Name=GGE_1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1604 GCA_000222085.2|AFQR01000029.1 Genbank CDS 11378 12067 . - 0 ID=cds-EGT80725.1;Parent=gene-GGE_1604;Dbxref=GeneID:21628938,InterPro:IPR012991,InterPro:IPR023220,PFAM:PF07996,NCBI_GP:EGT80725.1;Name=EGT80725.1;Note=NP_660231;gbkey=CDS;locus_tag=GGE_1604;product=YgiC-like protein;protein_id=EGT80725.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 11378 12002 . - . ID=id-GGE_1604;Dbxref=InterPro:IPR012991,PFAM:PF07996;Note=superfamily~t4ss~type iv secretion system%3B label: T4SS superfamily;gbkey=misc_feature;locus_tag=GGE_1604 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 11456 11939 . - . ID=id-GGE_1604-2;Dbxref=InterPro:IPR023220;Note=superfamily:SSF101082~typo iv secretion system protein trac~virb5 domain;gbkey=misc_feature;locus_tag=GGE_1604 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 11444 11789 . + . ID=id-AFQR01000029.1:11444..11789;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 11486 11495 . + . ID=id-AFQR01000029.1:11486..11495;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 12083 14497 . - . ID=gene-GGE_1605;Name=GGE_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1605 GCA_000222085.2|AFQR01000029.1 Genbank CDS 12083 14497 . - 0 ID=cds-EGT80726.1;Parent=gene-GGE_1605;Dbxref=GeneID:21628937,InterPro:IPR018145,PFAM:PF03135,NCBI_GP:EGT80726.1;Name=EGT80726.1;Note=NP_660230;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;locus_tag=GGE_1605;product=TraE-like protein;protein_id=EGT80726.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12101 14438 . - . ID=id-GGE_1605;Note=multi-dom%3B label: VirB4_CagE;gbkey=misc_feature;locus_tag=GGE_1605 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12584 12662 . - . ID=id-GGE_1605-2;Dbxref=InterPro:IPR018145,PFAM:PF03135;Note=cage_trbe_virb~cage%2C trbe%2C virb component of type iv transporter system%2C central domain;gbkey=misc_feature;locus_tag=GGE_1605 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12611 12635 . - . ID=id-GGE_1605-3;Note=superfamily%3B label: CagE_TrbE_VirB superfamily;gbkey=misc_feature;locus_tag=GGE_1605 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 13142 13190 . - . ID=id-GGE_1605-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1605 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12116 14465 . + . ID=id-AFQR01000029.1:12116..14465;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12116 12566 . + . ID=id-AFQR01000029.1:12116..12566;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12149 12905 . + . ID=id-AFQR01000029.1:12149..12905;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 12422 13841 . + . ID=id-AFQR01000029.1:12422..13841;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 14702 14824 . - . ID=gene-GGE_1606;Name=GGE_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1606 GCA_000222085.2|AFQR01000029.1 Genbank CDS 14702 14824 . - 0 ID=cds-EGT80727.1;Parent=gene-GGE_1606;Dbxref=InterPro:IPR007792,PFAM:PF05101,NCBI_GP:EGT80727.1;Name=EGT80727.1;Note=Hypothetical type IV secretion system%2C VirB3 / TrbD / AvhB;gbkey=CDS;locus_tag=GGE_1606;product=putative type IV secretion system%2C VirB3 / TrbD / AvhB;protein_id=EGT80727.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14702 14804 . - . ID=id-GGE_1606;Dbxref=InterPro:IPR007792,PFAM:PF05101;Note=virb3~type iv secretion system%2C virb3 / trbd / avhb;gbkey=misc_feature;locus_tag=GGE_1606 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14747 14771 . - . ID=id-GGE_1606-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1606 GCA_000222085.2|AFQR01000029.1 Genbank gene 14907 15221 . - . ID=gene-GGE_1607;Name=GGE_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1607 GCA_000222085.2|AFQR01000029.1 Genbank CDS 14907 15221 . - 0 ID=cds-EGT80728.1;Parent=gene-GGE_1607;Dbxref=GeneID:21628935,InterPro:IPR007039,PFAM:PF04956,NCBI_GP:EGT80728.1;Name=EGT80728.1;Note=NP_660228;gbkey=CDS;locus_tag=GGE_1607;product=TraC-like protein;protein_id=EGT80728.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14907 14964 . - . ID=id-GGE_1607;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1607 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14922 15177 . - . ID=id-GGE_1607-2;Dbxref=InterPro:IPR007039,PFAM:PF04956;Note=trbc~conjugal transfer%2Ctrbc;gbkey=misc_feature;locus_tag=GGE_1607 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14943 14976 . - . ID=id-GGE_1607-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1607 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14946 15150 . + . ID=id-AFQR01000029.1:14946..15150;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14976 15141 . + . ID=id-AFQR01000029.1:14976..15141;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 14976 15054 . + . ID=id-AFQR01000029.1:14976..15054;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 15273 15399 . + . ID=id-AFQR01000029.1:15273..15399;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000029.1 Genbank gene 15523 15924 . - . ID=gene-GGE_1608;Name=GGE_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1608 GCA_000222085.2|AFQR01000029.1 Genbank CDS 15523 15924 . - 0 ID=cds-EGT80729.1;Parent=gene-GGE_1608;Dbxref=InterPro:IPR008258,InterPro:IPR023346,PFAM:PF01464,NCBI_GP:EGT80729.1;Name=EGT80729.1;Note=Hypothetical lysozyme-like domain;gbkey=CDS;locus_tag=GGE_1608;product=putative lysozyme-like domain-containing protein;protein_id=EGT80729.1;transl_table=11 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 15538 15895 . - . ID=id-GGE_1608;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature;locus_tag=GGE_1608 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 15559 15871 . - . ID=id-GGE_1608-2;Dbxref=InterPro:IPR008258,PFAM:PF01464;Note=slt~lytic transglycosylase-like%2C catalytic;gbkey=misc_feature;locus_tag=GGE_1608 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 15589 15844 . - . ID=id-GGE_1608-3;Note=specific~superfamily%3B label: LT_GEWL;gbkey=misc_feature;locus_tag=GGE_1608 GCA_000222085.2|AFQR01000029.1 Genbank sequence_feature 15691 15742 . + . ID=id-AFQR01000029.1:15691..15742;Note=Gene3D:1.10.530.10;gbkey=misc_feature ##sequence-region AFQR01000028.1 1 27519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000028.1 Genbank region 1 27519 . + . ID=AFQR01000028.1:1..27519;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000028.1 Genbank gene 559 1542 . + . ID=gene-GGE_1569;Name=GGE_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1569 GCA_000222085.2|AFQR01000028.1 Genbank CDS 559 1542 . + 0 ID=cds-EGT80732.1;Parent=gene-GGE_1569;Dbxref=GeneID:21628939,InterPro:IPR007688,PFAM:PF04610,NCBI_GP:EGT80732.1;Name=EGT80732.1;Note=NP_660232;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||;locus_tag=GGE_1569;product=TraA-like protein;protein_id=EGT80732.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 676 1228 . + . ID=id-GGE_1569;Dbxref=InterPro:IPR007688,PFAM:PF04610;Note=trbl~conjugal transfer%2C trbl/virb6;gbkey=misc_feature;locus_tag=GGE_1569 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 706 1084 . + . ID=id-GGE_1569-2;Note=superfamily%3B label: TrbL superfamily;gbkey=misc_feature;locus_tag=GGE_1569 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 598 1276 . - . ID=id-AFQR01000028.1:598..1276;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 604 658 . - . ID=id-AFQR01000028.1:604..658;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 1258 . - . ID=id-AFQR01000028.1:628..1258;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 1153 . - . ID=id-AFQR01000028.1:628..1153;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 1057 . - . ID=id-AFQR01000028.1:628..1057;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 976 . - . ID=id-AFQR01000028.1:628..976;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 739 . - . ID=id-AFQR01000028.1:628..739;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 628 634 . - . ID=id-AFQR01000028.1:628..634;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 1724 2506 . + . ID=gene-GGE_1570;Name=GGE_1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1570 GCA_000222085.2|AFQR01000028.1 Genbank CDS 1724 2506 . + 0 ID=cds-EGT80733.1;Parent=gene-GGE_1570;Dbxref=GeneID:21628941,InterPro:IPR007430,PFAM:PF04335,NCBI_GP:EGT80733.1;Name=EGT80733.1;Note=NP_660234;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1570;product=TraG-like protein;protein_id=EGT80733.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 1850 2354 . + . ID=id-GGE_1570;Dbxref=InterPro:IPR007430,PFAM:PF04335;Note=virb8~virb8;gbkey=misc_feature;locus_tag=GGE_1570 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 1853 2351 . + . ID=id-GGE_1570-2;Note=superfamily%3B label: VirB8 superfamily;gbkey=misc_feature;locus_tag=GGE_1570 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 1793 1901 . - . ID=id-AFQR01000028.1:1793..1901;Note=seg~transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 2513 3289 . + . ID=gene-GGE_1571;Name=GGE_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1571 GCA_000222085.2|AFQR01000028.1 Genbank CDS 2513 3289 . + 0 ID=cds-EGT80734.1;Parent=gene-GGE_1571;Dbxref=GeneID:21628942,InterPro:IPR010258,PFAM:PF03524,NCBI_GP:EGT80734.1;Name=EGT80734.1;Note=NP_660235;gbkey=CDS;locus_tag=GGE_1571;product=TraH-like protein;protein_id=EGT80734.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 2606 3128 . + . ID=id-GGE_1571;Dbxref=InterPro:IPR010258,PFAM:PF03524;Note=cagx~conjugal transfer%2C trbg/virb9/cagx;gbkey=misc_feature;locus_tag=GGE_1571 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 2777 2963 . - . ID=id-AFQR01000028.1:2777..2963;Note=specific~superfamily%3B label: VirB9_CagX_TrbG;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 3282 4469 . + . ID=gene-GGE_1572;Name=GGE_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1572 GCA_000222085.2|AFQR01000028.1 Genbank CDS 3282 4469 . + 0 ID=cds-EGT80735.1;Parent=gene-GGE_1572;Dbxref=GeneID:71558979,InterPro:IPR005498,PFAM:PF03743,NCBI_GP:EGT80735.1;Name=EGT80735.1;Note=YP_271713;gbkey=CDS;locus_tag=GGE_1572;product=TraF/VirB10-like protein;protein_id=EGT80735.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 3351 3381 . - . ID=id-AFQR01000028.1:3351..3381;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 3405 3561 . - . ID=id-AFQR01000028.1:3405..3561;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 3438 3537 . - . ID=id-AFQR01000028.1:3438..3537;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 3816 3909 . - . ID=id-AFQR01000028.1:3816..3909;Dbxref=InterPro:IPR005498,PFAM:PF03743;Note=trbi~type iv secretion system%2C virb10 / trab / trbi;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 3819 3906 . - . ID=id-AFQR01000028.1:3819..3906;Note=superfamily%3B label: TrbI superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 4484 5185 . + . ID=gene-GGE_1573;Name=GGE_1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1573 GCA_000222085.2|AFQR01000028.1 Genbank CDS 4484 5185 . + 0 ID=cds-EGT80736.1;Parent=gene-GGE_1573;Dbxref=InterPro:IPR001482,PFAM:PF00437,NCBI_GP:EGT80736.1;Name=EGT80736.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;Ontology_term=GO:0006810,GO:0005622,GO:0005524;gbkey=CDS;go_component=intracellular|0005622||;go_function=ATP binding|0005524||;go_process=transport|0006810||;locus_tag=GGE_1573;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT80736.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 4529 5045 . + . ID=id-GGE_1573;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1573 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 4541 5036 . + . ID=id-GGE_1573-2;Dbxref=InterPro:IPR001482,PFAM:PF00437;Note=gspii_e~type ii secretion system protein e;gbkey=misc_feature;locus_tag=GGE_1573 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 4565 4772 . + . ID=id-GGE_1573-3;Note=Gene3D:3.30.450.90;gbkey=misc_feature;locus_tag=GGE_1573 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 4571 5012 . + . ID=id-GGE_1573-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1573 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 4742 4853 . - . ID=id-AFQR01000028.1:4742..4853;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 5241 5546 . + . ID=gene-GGE_1574;Name=GGE_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1574 GCA_000222085.2|AFQR01000028.1 Genbank CDS 5241 5546 . + 0 ID=cds-EGT80737.1;Parent=gene-GGE_1574;Dbxref=InterPro:IPR001482,PFAM:PF00437,NCBI_GP:EGT80737.1;Name=EGT80737.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;Ontology_term=GO:0006810,GO:0005622,GO:0005524;gbkey=CDS;go_component=intracellular|0005622||;go_function=ATP binding|0005524||;go_process=transport|0006810||;locus_tag=GGE_1574;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT80737.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5241 5493 . + . ID=id-GGE_1574;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1574 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5241 5487 . + . ID=id-GGE_1574-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1574 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5241 5484 . + . ID=id-GGE_1574-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1574 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5241 5478 . + . ID=id-GGE_1574-4;Dbxref=InterPro:IPR001482,PFAM:PF00437;Note=gspii_e~type ii secretion system protein e;gbkey=misc_feature;locus_tag=GGE_1574 GCA_000222085.2|AFQR01000028.1 Genbank gene 5556 7388 . + . ID=gene-GGE_1575;Name=GGE_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank CDS 5556 7388 . + 0 ID=cds-EGT80738.1;Parent=gene-GGE_1575;Dbxref=GeneID:71558981,InterPro:IPR003688,PFAM:PF02534,NCBI_GP:EGT80738.1;Name=EGT80738.1;Note=YP_271715;Ontology_term=GO:0009291,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=unidirectional conjugation|0009291||;locus_tag=GGE_1575;product=TraK/VirD4-like protein;protein_id=EGT80738.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5577 5604 . + . ID=id-GGE_1575;Note=seg;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5586 5625 . + . ID=id-GGE_1575-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5835 7065 . + . ID=id-GGE_1575-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5877 7014 . + . ID=id-GGE_1575-4;Note=multi-dom%3B label: TraG;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5880 7014 . + . ID=id-GGE_1575-5;Dbxref=InterPro:IPR003688,PFAM:PF02534;Note=trag~ti-type conjugative transfer system%2C trag-like;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 6009 6762 . + . ID=id-GGE_1575-6;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1575 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 5625 5766 . - . ID=id-AFQR01000028.1:5625..5766;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 6204 6684 . - . ID=id-AFQR01000028.1:6204..6684;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 7399 8055 . + . ID=gene-GGE_1576;Name=GGE_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1576 GCA_000222085.2|AFQR01000028.1 Genbank CDS 7399 8055 . + 0 ID=cds-EGT80739.1;Parent=gene-GGE_1576;Dbxref=GeneID:21628946,InterPro:IPR009989,PFAM:PF07424,NCBI_GP:EGT80739.1;Name=EGT80739.1;Note=NP_660239;gbkey=CDS;locus_tag=GGE_1576;product=YggA-like protein;protein_id=EGT80739.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 7420 7453 . + . ID=id-GGE_1576;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1576 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 7438 7969 . + . ID=id-GGE_1576-2;Note=superfamily%3B label: TrbM superfamily;gbkey=misc_feature;locus_tag=GGE_1576 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 7438 7963 . + . ID=id-GGE_1576-3;Dbxref=InterPro:IPR009989,PFAM:PF07424;Note=trbm~trbm;gbkey=misc_feature;locus_tag=GGE_1576 GCA_000222085.2|AFQR01000028.1 Genbank gene 8216 8641 . + . ID=gene-GGE_1577;Name=GGE_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank CDS 8216 8641 . + 0 ID=cds-EGT80740.1;Parent=gene-GGE_1577;Dbxref=GeneID:21628947,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,TIGRFAM:TIGR00621,NCBI_GP:EGT80740.1;Name=EGT80740.1;Note=NP_660240;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||;go_process=DNA replication|0006260||;locus_tag=GGE_1577;product=single-strand DNA binding helix-destabilizing protein;protein_id=EGT80740.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8216 8639 . + . ID=id-GGE_1577;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8216 8540 . + . ID=id-GGE_1577-2;Dbxref=InterPro:IPR011344;Note=HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8225 8633 . + . ID=id-GGE_1577-3;Dbxref=InterPro:IPR011344,TIGRFAM:TIGR00621;Note=ssb: single-strand binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8228 8630 . + . ID=id-GGE_1577-4;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8231 8531 . + . ID=id-GGE_1577-5;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8231 8252 . + . ID=id-GGE_1577-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8234 8522 . + . ID=id-GGE_1577-7;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8267 8468 . + . ID=id-GGE_1577-8;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;locus_tag=GGE_1577 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8246 8306 . - . ID=id-AFQR01000028.1:8246..8306;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8264 8519 . - . ID=id-AFQR01000028.1:8264..8519;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8738 8876 . + . ID=id-AFQR01000028.1:8738..8876;Note=superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8750 8906 . + . ID=id-AFQR01000028.1:8750..8906;Note=Gene3D:3.40.50.140;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 8774 8882 . - . ID=id-AFQR01000028.1:8774..8882;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 9150 9816 . + . ID=id-AFQR01000028.1:9150..9816;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 9420 9429 . - . ID=id-AFQR01000028.1:9420..9429;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 9925 12112 . + . ID=id-AFQR01000028.1:9925..12112;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 9946 11671 . + . ID=id-AFQR01000028.1:9946..11671;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 9946 10813 . + . ID=id-AFQR01000028.1:9946..10813;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 12455 12802 . - . ID=gene-GGE_1578;Name=GGE_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1578 GCA_000222085.2|AFQR01000028.1 Genbank CDS 12455 12802 . - 0 ID=cds-EGT80741.1;Parent=gene-GGE_1578;Dbxref=GeneID:21628952,InterPro:IPR008687,PFAM:PF05713,NCBI_GP:EGT80741.1;Name=EGT80741.1;Note=NP_660245;gbkey=CDS;locus_tag=GGE_1578;product=relaxosome component;protein_id=EGT80741.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 12608 12641 . + . ID=id-AFQR01000028.1:12608..12641;Dbxref=InterPro:IPR008687,PFAM:PF05713;Note=superfamily~mobc~bacterial mobilisation%3B label: MobC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 13161 13631 . + . ID=gene-GGE_1579;Name=GGE_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1579 GCA_000222085.2|AFQR01000028.1 Genbank CDS 13161 13631 . + 0 ID=cds-EGT80742.1;Parent=gene-GGE_1579;Dbxref=GeneID:71558989,NCBI_GP:EGT80742.1;Name=EGT80742.1;Note=YP_271723~pF1947_31;gbkey=CDS;locus_tag=GGE_1579;product=Hypothetical protein;protein_id=EGT80742.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 13194 13521 . + . ID=id-GGE_1579;Note=superfamily%3B label: Peptidase_C1 superfamily;gbkey=misc_feature;locus_tag=GGE_1579 GCA_000222085.2|AFQR01000028.1 Genbank gene 13634 14386 . + . ID=gene-GGE_1580;Name=GGE_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1580 GCA_000222085.2|AFQR01000028.1 Genbank CDS 13634 14386 . + 0 ID=cds-EGT80743.1;Parent=gene-GGE_1580;Dbxref=GeneID:21628954,InterPro:IPR002586,PFAM:PF01656,NCBI_GP:EGT80743.1;Name=EGT80743.1;Note=NP_660247;gbkey=CDS;locus_tag=GGE_1580;product=TraLRP4-like protein;protein_id=EGT80743.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 13652 14363 . + . ID=id-GGE_1580;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1580 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 13652 14333 . + . ID=id-GGE_1580-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1580 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 13664 14186 . + . ID=id-GGE_1580-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1580 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 13667 13946 . + . ID=id-GGE_1580-4;Dbxref=InterPro:IPR002586,PFAM:PF01656;Note=cbia~cobyrinic acid a%2Cc-diamide synthase;gbkey=misc_feature;locus_tag=GGE_1580 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14397 14406 . + . ID=id-AFQR01000028.1:14397..14406;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14411 14420 . - . ID=id-AFQR01000028.1:14411..14420;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 14624 15358 . + . ID=gene-GGE_1581;Name=GGE_1581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1581 GCA_000222085.2|AFQR01000028.1 Genbank CDS 14624 15358 . + 0 ID=cds-EGT80744.1;Parent=gene-GGE_1581;Dbxref=GeneID:21628955,NCBI_GP:EGT80744.1;Name=EGT80744.1;Note=NP_660248~pF3028_p33;gbkey=CDS;locus_tag=GGE_1581;product=Hypothetical protein;protein_id=EGT80744.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14630 14690 . + . ID=id-GGE_1581;Note=seg;gbkey=misc_feature;locus_tag=GGE_1581 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14648 14699 . + . ID=id-GGE_1581-2;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1581 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14660 15140 . - . ID=id-AFQR01000028.1:14660..15140;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 14693 15140 . - . ID=id-AFQR01000028.1:14693..15140;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 15361 15681 . + . ID=gene-GGE_1582;Name=GGE_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1582 GCA_000222085.2|AFQR01000028.1 Genbank CDS 15361 15681 . + 0 ID=cds-EGT80745.1;Parent=gene-GGE_1582;Dbxref=GeneID:71558992,NCBI_GP:EGT80745.1;Name=EGT80745.1;Note=YP_271726~pF1947_34;gbkey=CDS;locus_tag=GGE_1582;product=Hypothetical protein;protein_id=EGT80745.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 15373 15430 . + . ID=id-GGE_1582;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1582 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 15388 15580 . - . ID=id-AFQR01000028.1:15388..15580;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 15415 15460 . - . ID=id-AFQR01000028.1:15415..15460;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 15418 15523 . - . ID=id-AFQR01000028.1:15418..15523;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 16709 16990 . - . ID=gene-GGE_1583;Name=GGE_1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1583 GCA_000222085.2|AFQR01000028.1 Genbank CDS 16709 16990 . - 0 ID=cds-EGT80746.1;Parent=gene-GGE_1583;Dbxref=GeneID:170717694,InterPro:IPR019199,PFAM:PF09827,NCBI_GP:EGT80746.1;Name=EGT80746.1;Note=YP_001784768;gbkey=CDS;locus_tag=GGE_1583;product=virulence-associated protein D VapD region;protein_id=EGT80746.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 16709 16988 . - . ID=id-GGE_1583;Note=superfamily%3B label: Cas2_I_II_III superfamily;gbkey=misc_feature;locus_tag=GGE_1583 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 16709 16964 . - . ID=id-GGE_1583-2;Dbxref=InterPro:IPR019199,PFAM:PF09827;Note=crispr_cas2~virulence-associated protein d / crispr associated protein cas2;gbkey=misc_feature;locus_tag=GGE_1583 GCA_000222085.2|AFQR01000028.1 Genbank gene 17181 17540 . + . ID=gene-GGE_1584;Name=GGE_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1584 GCA_000222085.2|AFQR01000028.1 Genbank CDS 17181 17540 . + 0 ID=cds-EGT80747.1;Parent=gene-GGE_1584;Dbxref=GeneID:239999327,NCBI_GP:EGT80747.1;Name=EGT80747.1;Note=ZP_04719251;gbkey=CDS;locus_tag=GGE_1584;product=putative phage associated protein;protein_id=EGT80747.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 17644 17881 . - . ID=id-AFQR01000028.1:17644..17881;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 17644 17776 . - . ID=id-AFQR01000028.1:17644..17776;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 18051 18278 . + . ID=gene-GGE_1585;Name=GGE_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1585 GCA_000222085.2|AFQR01000028.1 Genbank CDS 18051 18278 . + 0 ID=cds-EGT80748.1;Parent=gene-GGE_1585;Dbxref=GeneID:145639583,NCBI_GP:EGT80748.1;Name=EGT80748.1;Note=ZP_01795187~CGSHiII_10088;gbkey=CDS;locus_tag=GGE_1585;product=Hypothetical protein;protein_id=EGT80748.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank gene 18951 19193 . + . ID=gene-GGE_1586;Name=GGE_1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1586 GCA_000222085.2|AFQR01000028.1 Genbank CDS 18951 19193 . + 0 ID=cds-EGT80749.1;Parent=gene-GGE_1586;Dbxref=GeneID:301168736,NCBI_GP:EGT80749.1;Name=EGT80749.1;Note=CBW28327;gbkey=CDS;locus_tag=GGE_1586;product=Conserved putative Hypothetical protein;protein_id=EGT80749.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19011 19104 . - . ID=id-AFQR01000028.1:19011..19104;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19011 19026 . - . ID=id-AFQR01000028.1:19011..19026;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 19404 20015 . + . ID=gene-GGE_1587;Name=GGE_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank CDS 19404 20015 . + 0 ID=cds-EGT80750.1;Parent=gene-GGE_1587;Dbxref=GeneID:21628924,InterPro:IPR006118,InterPro:IPR006119,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00239,PFAM:PF02796,NCBI_GP:EGT80750.1;Name=EGT80750.1;Note=NP_660217;Ontology_term=GO:0006310,GO:0045449,GO:0003677,GO:0005515,GO:0000150;gbkey=CDS;go_function=DNA binding|0003677||,protein binding|0005515||,recombinase activity|0000150||;go_process=DNA recombination|0006310||,regulation of transcription|0045449||;locus_tag=GGE_1587;product=resolvase/integrase-like protein;protein_id=EGT80750.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19404 20013 . + . ID=id-GGE_1587;Note=multi-dom%3B label: PinR;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19404 19866 . + . ID=id-GGE_1587-2;Dbxref=InterPro:IPR006119;Note=superfamily:SSF53041~resolvase-like~resolvase;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19413 19827 . + . ID=id-GGE_1587-3;Note=specific~superfamily%3B label: Ser_Recombinase superfamily;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19413 19806 . + . ID=id-GGE_1587-4;Dbxref=InterPro:IPR006119;Note=Gene3D:3.40.50.1390~resolvase;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19416 19848 . + . ID=id-GGE_1587-5;Dbxref=InterPro:IPR006119,PFAM:PF00239;Note=resolvase~resolvase;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19422 19431 . + . ID=id-GGE_1587-6;Dbxref=InterPro:IPR006118;Note=PatternScan:PS00397~recombinases_1~recombinase%2C conserved site;gbkey=misc_feature;locus_tag=GGE_1587 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19443 19611 . - . ID=id-AFQR01000028.1:19443..19611;Dbxref=InterPro:IPR006118;Note=PatternScan:PS00398~recombinases_2~recombinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19470 19947 . - . ID=id-AFQR01000028.1:19470..19947;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19527 19878 . - . ID=id-AFQR01000028.1:19527..19878;Dbxref=InterPro:IPR009057;Note=specific~superfamily~superfamily:SSF46689~homeodomain-like~homeodomain-like%3B label: HTH_Hin_like;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19530 19878 . - . ID=id-AFQR01000028.1:19530..19878;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 19533 19878 . - . ID=id-AFQR01000028.1:19533..19878;Dbxref=InterPro:IPR006120,PFAM:PF02796;Note=hth_7~resolvase%2C helix-turn-helix domain;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 20097 21032 . - . ID=gene-GGE_1588;Name=GGE_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank CDS 20097 21032 . - 0 ID=cds-EGT80751.1;Parent=gene-GGE_1588;Dbxref=GeneID:71558961,InterPro:IPR003812,PFAM:PF02661,NCBI_GP:EGT80751.1;Name=EGT80751.1;Note=YP_271695;gbkey=CDS;locus_tag=GGE_1588;product=fic-1 cell filamentation-like protein;protein_id=EGT80751.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 20109 20664 . - . ID=id-GGE_1588;Note=superfamily%3B label: Fic superfamily;gbkey=misc_feature;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 20130 20703 . - . ID=id-GGE_1588-2;Dbxref=InterPro:IPR003812;Note=Gene3D:1.10.3290.10~filamentation induced by camp/death on curing-related;gbkey=misc_feature;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 20175 20661 . - . ID=id-GGE_1588-3;Note=superfamily:SSF140931~fic-like;gbkey=misc_feature;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 20253 20511 . - . ID=id-GGE_1588-4;Dbxref=InterPro:IPR003812;Note=ProfileScan:PS51459~fido~filamentation induced by camp/death on curing-related;gbkey=misc_feature;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 20253 20394 . - . ID=id-GGE_1588-5;Dbxref=InterPro:IPR003812,PFAM:PF02661;Note=fic~filamentation induced by camp/death on curing-related;gbkey=misc_feature;locus_tag=GGE_1588 GCA_000222085.2|AFQR01000028.1 Genbank gene 21205 21528 . - . ID=gene-GGE_1589;Name=GGE_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1589 GCA_000222085.2|AFQR01000028.1 Genbank CDS 21205 21528 . - 0 ID=cds-EGT80752.1;Parent=gene-GGE_1589;Dbxref=GeneID:21628926,NCBI_GP:EGT80752.1;Name=EGT80752.1;Note=NP_660219~pF3028_p04;gbkey=CDS;locus_tag=GGE_1589;product=Hypothetical protein;protein_id=EGT80752.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank gene 21521 21988 . - . ID=gene-GGE_1590;Name=GGE_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1590 GCA_000222085.2|AFQR01000028.1 Genbank CDS 21521 21988 . - 0 ID=cds-EGT80753.1;Parent=gene-GGE_1590;Dbxref=GeneID:21628927,NCBI_GP:EGT80753.1;Name=EGT80753.1;Note=NP_660220~pF3028_p05;gbkey=CDS;locus_tag=GGE_1590;product=Hypothetical protein;protein_id=EGT80753.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 21569 21941 . + . ID=id-AFQR01000028.1:21569..21941;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 22288 22623 . - . ID=gene-GGE_1591;Name=GGE_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank CDS 22288 22623 . - 0 ID=cds-EGT80754.1;Parent=gene-GGE_1591;Dbxref=InterPro:IPR002586,PFAM:PF01656,NCBI_GP:EGT80754.1;Name=EGT80754.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;gbkey=CDS;locus_tag=GGE_1591;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT80754.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 22288 22621 . - . ID=id-GGE_1591;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 22303 22609 . - . ID=id-GGE_1591-2;Note=specific~superfamily%3B label: ParA;gbkey=misc_feature;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 22303 22606 . - . ID=id-GGE_1591-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 22309 22600 . - . ID=id-GGE_1591-4;Dbxref=InterPro:IPR002586,PFAM:PF01656;Note=cbia~cobyrinic acid a%2Cc-diamide synthase;gbkey=misc_feature;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 22321 22588 . - . ID=id-GGE_1591-5;Note=HMMPanther:PTHR13696:SF23~subfamily not named~HMMPanther:PTHR13696~family not named;gbkey=misc_feature;locus_tag=GGE_1591 GCA_000222085.2|AFQR01000028.1 Genbank gene 22755 23303 . - . ID=gene-GGE_1592;Name=GGE_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1592 GCA_000222085.2|AFQR01000028.1 Genbank CDS 22755 23303 . - 0 ID=cds-EGT80755.1;Parent=gene-GGE_1592;Dbxref=GeneID:21628929,NCBI_GP:EGT80755.1;Name=EGT80755.1;Note=NP_660222~pF3028_p07;gbkey=CDS;locus_tag=GGE_1592;product=Hypothetical protein;protein_id=EGT80755.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 23552 23723 . - . ID=id-AFQR01000028.1:23552..23723;Dbxref=InterPro:IPR009921,PFAM:PF07308;Note=superfamily~duf1456~domain of unknown function duf1456%3B label: DUF1456 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 23902 24115 . + . ID=id-AFQR01000028.1:23902..24115;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 24210 24393 . + . ID=id-AFQR01000028.1:24210..24393;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 24465 24516 . - . ID=id-AFQR01000028.1:24465..24516;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 25362 26378 . - . ID=gene-GGE_1593;Name=GGE_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1593 GCA_000222085.2|AFQR01000028.1 Genbank CDS 25362 26378 . - 0 ID=cds-EGT80756.1;Parent=gene-GGE_1593;Dbxref=GeneID:71558967,InterPro:IPR003446,PFAM:PF02387,NCBI_GP:EGT80756.1;Name=EGT80756.1;Note=YP_271701;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||;locus_tag=GGE_1593;product=putative plasmid replication initiation%2C RepA;protein_id=EGT80756.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 25455 25920 . - . ID=id-GGE_1593;Dbxref=InterPro:IPR003446,PFAM:PF02387;Note=incfii_repa~plasmid replication initiation%2C repa;gbkey=misc_feature;locus_tag=GGE_1593 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 25398 25431 . + . ID=id-AFQR01000028.1:25398..25431;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000028.1 Genbank gene 26966 27202 . + . ID=gene-GGE_1594;Name=GGE_1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1594 GCA_000222085.2|AFQR01000028.1 Genbank CDS 26966 27202 . + 0 ID=cds-EGT80757.1;Parent=gene-GGE_1594;Dbxref=GeneID:21628932,NCBI_GP:EGT80757.1;Name=EGT80757.1;Note=NP_660225;gbkey=CDS;locus_tag=GGE_1594;product=repressor-like protein;protein_id=EGT80757.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank gene 27199 27498 . + . ID=gene-GGE_1595;Name=GGE_1595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1595 GCA_000222085.2|AFQR01000028.1 Genbank CDS 27199 27498 . + 0 ID=cds-EGT80758.1;Parent=gene-GGE_1595;Dbxref=NCBI_GP:EGT80758.1;Name=EGT80758.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_1595;product=putative lipoprotein;protein_id=EGT80758.1;transl_table=11 GCA_000222085.2|AFQR01000028.1 Genbank sequence_feature 27199 27259 . + . ID=id-GGE_1595;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1595 ##sequence-region AFQR01000027.1 1 60093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000027.1 Genbank region 1 60093 . + . ID=AFQR01000027.1:1..60093;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000027.1 Genbank gene 474 911 . - . ID=gene-GGE_1519;Name=GGE_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1519 GCA_000222085.2|AFQR01000027.1 Genbank CDS 474 911 . - 0 ID=cds-EGT80811.1;Parent=gene-GGE_1519;Dbxref=InterPro:IPR002495,PFAM:PF01501,NCBI_GP:EGT80811.1;Name=EGT80811.1;Note=Hypothetical transferase-like protein;Ontology_term=GO:0016757;gbkey=CDS;go_function=transferase activity transferring glycosyl groups|0016757||;locus_tag=GGE_1519;product=putative transferase-like protein;protein_id=EGT80811.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 474 909 . - . ID=id-GGE_1519;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;locus_tag=GGE_1519 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 474 900 . - . ID=id-GGE_1519-2;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_1519 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 474 828 . - . ID=id-GGE_1519-3;Note=superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;locus_tag=GGE_1519 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 531 780 . - . ID=id-GGE_1519-4;Dbxref=InterPro:IPR002495,PFAM:PF01501;Note=glyco_transf_8~glycosyl transferase%2C family 8;gbkey=misc_feature;locus_tag=GGE_1519 GCA_000222085.2|AFQR01000027.1 Genbank gene 977 1291 . - . ID=gene-GGE_1520;Name=GGE_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1520 GCA_000222085.2|AFQR01000027.1 Genbank CDS 977 1291 . - 0 ID=cds-EGT80812.1;Parent=gene-GGE_1520;Dbxref=InterPro:IPR002495,PFAM:PF01501,NCBI_GP:EGT80812.1;Name=EGT80812.1;Note=Hypothetical transferase-like protein;Ontology_term=GO:0016757;gbkey=CDS;go_function=transferase activity transferring glycosyl groups|0016757||;locus_tag=GGE_1520;product=putative transferase-like protein;protein_id=EGT80812.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 977 1286 . - . ID=id-GGE_1520;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_1520 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 977 1274 . - . ID=id-GGE_1520-2;Note=superfamily~superfamily:SSF53448~nucleotide-diphospho-sugar transferases%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;locus_tag=GGE_1520 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 983 1280 . - . ID=id-GGE_1520-3;Dbxref=InterPro:IPR002495,PFAM:PF01501;Note=glyco_transf_8~glycosyl transferase%2C family 8;gbkey=misc_feature;locus_tag=GGE_1520 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1019 1043 . + . ID=id-AFQR01000027.1:1019..1043;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 1460 4324 . - . ID=gene-GGE_1521;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank CDS 1460 4324 . - 0 ID=cds-EGT80813.1;Parent=gene-GGE_1521;Dbxref=GeneID:81335485,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002303,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010978,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR019499,PFAM:PF00133,PFAM:PF08264,PFAM:PF10458,TIGRFAM:TIGR00422,NCBI_GP:EGT80813.1;Name=EGT80813.1;Ontology_term=GO:0006418,GO:0006412,GO:0006438,GO:0005737,GO:0005524,GO:0004812,GO:0000166,GO:0004832;gbkey=CDS;gene=valS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,valine-tRNA ligase activity|0004832||;go_process=tRNA aminoacylation for protein translation|0006418||,translation|0006412||,valyl-tRNA aminoacylation|0006438||;locus_tag=GGE_1521;product=Valyl-tRNA synthetase;protein_id=EGT80813.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1460 4322 . - . ID=id-GGE_1521;Dbxref=InterPro:IPR002303;Note=HMMPanther:PTHR11946:SF5~valyl-trna synthetase~valyl-trna synthetase~HMMPanther:PTHR11946~family not named;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1469 4313 . - . ID=id-GGE_1521-2;Note=multi-dom%3B label: valS;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1472 3392 . - . ID=id-GGE_1521-3;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1481 4298 . - . ID=id-GGE_1521-4;Dbxref=InterPro:IPR002303;Note=HAMAP:MF_02004~val_trna_synth_type1~valyl-trna synthetase;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1481 4247 . - . ID=id-GGE_1521-5;Dbxref=InterPro:IPR002303,TIGRFAM:TIGR00422;Note=vals: valyl-trna synthetase~valyl-trna synthetase;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1520 3314 . - . ID=id-GGE_1521-6;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1577 1928 . - . ID=id-GGE_1521-7;Note=specific~superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=valS;locus_tag=GGE_1521 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1496 1604 . + . ID=id-AFQR01000027.1:1496..1604;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1496 1583 . + . ID=id-AFQR01000027.1:1496..1583;Dbxref=InterPro:IPR002303;Note=FPrintScan:PR00986~trnasynthval~valyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1502 2585 . + . ID=id-AFQR01000027.1:1502..2585;Dbxref=InterPro:IPR002303;Note=FPrintScan:PR00986~trnasynthval~valyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1514 2186 . + . ID=id-AFQR01000027.1:1514..2186;Dbxref=InterPro:IPR002303;Note=FPrintScan:PR00986~trnasynthval~valyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1517 2978 . + . ID=id-AFQR01000027.1:1517..2978;Dbxref=InterPro:IPR002303;Note=FPrintScan:PR00986~trnasynthval~valyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1526 4241 . + . ID=id-AFQR01000027.1:1526..4241;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1526 2885 . + . ID=id-AFQR01000027.1:1526..2885;Dbxref=InterPro:IPR002303;Note=FPrintScan:PR00986~trnasynthval~valyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1529 3302 . + . ID=id-AFQR01000027.1:1529..3302;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1568 4115 . + . ID=id-AFQR01000027.1:1568..4115;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1637 4127 . + . ID=id-AFQR01000027.1:1637..4127;Note=superfamily%3B label: Val_tRNA-synt_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1643 4127 . + . ID=id-AFQR01000027.1:1643..4127;Dbxref=InterPro:IPR019499,PFAM:PF10458;Note=val_trna-synt_c~valyl-trna synthetase%2C class ia%2C trna-binding arm;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1658 4121 . + . ID=id-AFQR01000027.1:1658..4121;Dbxref=InterPro:IPR010978;Note=superfamily:SSF46589~trna-binding arm~trna-binding arm;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1856 3368 . + . ID=id-AFQR01000027.1:1856..3368;Note=specific~superfamily%3B label: Anticodon_Ia_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1907 3491 . + . ID=id-AFQR01000027.1:1907..3491;Dbxref=InterPro:IPR013155,PFAM:PF08264;Note=anticodon_1~valyl/leucyl/isoleucyl-trna synthetase%2C class i%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1961 2060 . + . ID=id-AFQR01000027.1:1961..2060;Dbxref=InterPro:IPR009008;Note=Gene3D:3.90.740.10~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 1988 2048 . + . ID=id-AFQR01000027.1:1988..2048;Dbxref=InterPro:IPR009008;Note=superfamily:SSF50677~valrs/ilers/leurs editing domain~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 2009 3371 . + . ID=id-AFQR01000027.1:2009..3371;Note=Gene3D:1.10.730.10;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 2228 3404 . + . ID=id-AFQR01000027.1:2228..3404;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 2270 2561 . + . ID=id-AFQR01000027.1:2270..2561;Note=specific~superfamily%3B label: nt_trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 5418 5729 . - . ID=gene-GGE_1522;Name=GGE_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank CDS 5418 5729 . - 0 ID=cds-EGT80814.1;Parent=gene-GGE_1522;Dbxref=InterPro:IPR007374,InterPro:IPR008314,InterPro:IPR015947,PFAM:PF04266,PIR:PIRSF029143,NCBI_GP:EGT80814.1;Name=EGT80814.1;Note=CGSHiEE_04535;gbkey=CDS;locus_tag=GGE_1522;product=UPF0267 protein;protein_id=EGT80814.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5418 5727 . - . ID=id-GGE_1522;Dbxref=InterPro:IPR015947;Note=superfamily:SSF88697~pua domain-like~pseudouridine synthase/archaeosine transglycosylase-like;gbkey=misc_feature;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5418 5721 . - . ID=id-GGE_1522-2;Dbxref=InterPro:IPR008314,PIR:PIRSF029143;Note=uncharacterised conserved protein%2C ucp029143 type~uncharacterised conserved protein ucp029143;gbkey=misc_feature;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5424 5724 . - . ID=id-GGE_1522-3;Dbxref=InterPro:IPR008314;Note=HAMAP:MF_00684~upf0267~uncharacterised conserved protein ucp029143;gbkey=misc_feature;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5433 5712 . - . ID=id-GGE_1522-4;Note=specific~superfamily%3B label: ASCH superfamily;gbkey=misc_feature;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5436 5709 . - . ID=id-GGE_1522-5;Dbxref=InterPro:IPR007374,PFAM:PF04266;Note=asch~asch domain;gbkey=misc_feature;locus_tag=GGE_1522 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 5940 6114 . - . ID=id-AFQR01000027.1:5940..6114;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 6160 6166 . - . ID=id-AFQR01000027.1:6160..6166;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 6184 6319 . - . ID=id-AFQR01000027.1:6184..6319;Note=superfamily%3B label: Lipocalin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 6292 6337 . - . ID=id-AFQR01000027.1:6292..6337;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 6577 7089 . - . ID=gene-GGE_1523;Name=GGE_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1523 GCA_000222085.2|AFQR01000027.1 Genbank CDS 6577 7089 . - 0 ID=cds-EGT80815.1;Parent=gene-GGE_1523;Dbxref=GeneID:319776320,NCBI_GP:EGT80815.1;Name=EGT80815.1;Note=YP_004138808;gbkey=CDS;locus_tag=GGE_1523;product=putative lipoprotein;protein_id=EGT80815.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 6577 6643 . - . ID=id-GGE_1523;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1523 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 6736 6802 . - . ID=id-GGE_1523-2;Note=multi-dom%3B label: Cytadhesin_P30;gbkey=misc_feature;locus_tag=GGE_1523 GCA_000222085.2|AFQR01000027.1 Genbank gene 7105 7539 . - . ID=gene-GGE_1524;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank CDS 7105 7539 . - 0 ID=cds-EGT80816.1;Parent=gene-GGE_1524;Dbxref=GeneID:1170335,InterPro:IPR007459,PFAM:PF04364,NCBI_GP:EGT80816.1;Name=EGT80816.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holC;go_function=DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_1524;product=DNA polymerase III subunit chi;protein_id=EGT80816.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7105 7447 . - . ID=id-GGE_1524;Note=HMMPanther:PTHR11963:SF9~dna polymerase iii subunit chi~HMMPanther:PTHR11963~family not named;gbkey=misc_feature;gene=holC;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7111 7534 . - . ID=id-GGE_1524-2;Dbxref=InterPro:IPR007459;Note=superfamily:SSF102400~dna polymerase iii chi subunit~dna polymerase iii chi subunit%2C holc;gbkey=misc_feature;gene=holC;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7114 7525 . - . ID=id-GGE_1524-3;Dbxref=InterPro:IPR007459;Note=Gene3D:3.40.50.10110~dna polymerase iii chi subunit%2C holc;gbkey=misc_feature;gene=holC;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7114 7522 . - . ID=id-GGE_1524-4;Note=superfamily%3B label: DNA_pol3_chi superfamily;gbkey=misc_feature;gene=holC;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7114 7516 . - . ID=id-GGE_1524-5;Dbxref=InterPro:IPR007459,PFAM:PF04364;Note=dna_pol3_chi~dna polymerase iii chi subunit%2C holc;gbkey=misc_feature;gene=holC;locus_tag=GGE_1524 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7651 7660 . - . ID=id-AFQR01000027.1:7651..7660;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 7775 9169 . + . ID=gene-GGE_1525;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank CDS 7775 9169 . + 0 ID=cds-EGT80817.1;Parent=gene-GGE_1525;Dbxref=GeneID:6016063,InterPro:IPR000362,InterPro:IPR005677,InterPro:IPR008948,InterPro:IPR018951,InterPro:IPR020557,InterPro:IPR022761,PFAM:PF00206,PFAM:PF10415,TIGRFAM:TIGR00979,NCBI_GP:EGT80817.1;Name=EGT80817.1;Ontology_term=GO:0006106,GO:0006099,GO:0045239,GO:0003824,GO:0004333,GO:0016829;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle enzyme complex|0045239||;go_function=catalytic activity|0003824||,fumarate hydratase activity|0004333||,lyase activity|0016829||;go_process=fumarate metabolic process|0006106||,tricarboxylic acid cycle|0006099||;locus_tag=GGE_1525;product=Fumarate hydratase class II;protein_id=EGT80817.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7775 9167 . + . ID=id-GGE_1525;Note=multi-dom%3B label: fumC;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7775 9158 . + . ID=id-GGE_1525-2;Note=HMMPanther:PTHR11444:SF1~aspartate ammonia lyase~HMMPanther:PTHR11444~family not named;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7781 9158 . + . ID=id-GGE_1525-3;Dbxref=InterPro:IPR005677;Note=HAMAP:MF_00743~fumarasec~fumarate hydratase%2C class ii;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7781 8186 . + . ID=id-GGE_1525-4;Note=Gene3D:1.10.275.10;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7784 9155 . + . ID=id-GGE_1525-5;Dbxref=InterPro:IPR008948;Note=superfamily:SSF48557~l-aspartase-like~l-aspartase-like;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7784 9152 . + . ID=id-GGE_1525-6;Dbxref=InterPro:IPR005677,TIGRFAM:TIGR00979;Note=fumc_ii: fumarate hydratase%2C class ii~fumarate hydratase%2C class ii;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7787 9143 . + . ID=id-GGE_1525-7;Note=specific~superfamily%3B label: Fumarase_classII;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7808 8771 . + . ID=id-GGE_1525-8;Dbxref=InterPro:IPR022761,PFAM:PF00206;Note=lyase_1~lyase 1;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 8192 8609 . + . ID=id-GGE_1525-9;Note=Gene3D:1.20.200.10;gbkey=misc_feature;gene=fumC;locus_tag=GGE_1525 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7805 8726 . - . ID=id-AFQR01000027.1:7805..8726;Dbxref=InterPro:IPR020557;Note=PatternScan:PS00163~fumarate_lyases~fumarate lyase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7811 8450 . - . ID=id-AFQR01000027.1:7811..8450;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7826 8726 . - . ID=id-AFQR01000027.1:7826..8726;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7832 8315 . - . ID=id-AFQR01000027.1:7832..8315;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7832 8177 . - . ID=id-AFQR01000027.1:7832..8177;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7859 8588 . - . ID=id-AFQR01000027.1:7859..8588;Dbxref=InterPro:IPR000362;Note=FPrintScan:PR00149~fumratelyase~fumarate lyase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7910 9026 . - . ID=id-AFQR01000027.1:7910..9026;Note=Gene3D:1.10.40.30;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 7937 8999 . - . ID=id-AFQR01000027.1:7937..8999;Dbxref=InterPro:IPR018951,PFAM:PF10415;Note=fumarasec_c~fumarase c;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 9297 9905 . + . ID=gene-GGE_1526;Name=GGE_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1526 GCA_000222085.2|AFQR01000027.1 Genbank CDS 9297 9905 . + 0 ID=cds-EGT80818.1;Parent=gene-GGE_1526;Dbxref=GeneID:1175750,NCBI_GP:EGT80818.1;Name=EGT80818.1;Note=HI_1399;gbkey=CDS;locus_tag=GGE_1526;product=hypothetical protein;protein_id=EGT80818.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank gene 10006 10830 . - . ID=gene-GGE_1527;Name=trpH;gbkey=Gene;gene=trpH;gene_biotype=protein_coding;locus_tag=GGE_1527 GCA_000222085.2|AFQR01000027.1 Genbank CDS 10006 10830 . - 0 ID=cds-EGT80819.1;Parent=gene-GGE_1527;Dbxref=GeneID:1175777,InterPro:IPR004013,InterPro:IPR016195,PFAM:PF02811,NCBI_GP:EGT80819.1;Name=EGT80819.1;Ontology_term=GO:0003824;gbkey=CDS;gene=trpH;go_function=catalytic activity|0003824||;locus_tag=GGE_1527;product=Protein trpH;protein_id=EGT80819.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10012 10771 . - . ID=id-GGE_1527;Note=multi-dom%3B label: COG0613;gbkey=misc_feature;gene=trpH;locus_tag=GGE_1527 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10015 10801 . - . ID=id-GGE_1527-2;Dbxref=InterPro:IPR016195;Note=superfamily:SSF89550~php domain-like~polymerase/histidinol phosphatase-like;gbkey=misc_feature;gene=trpH;locus_tag=GGE_1527 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10021 10672 . - . ID=id-GGE_1527-3;Dbxref=InterPro:IPR004013,PFAM:PF02811;Note=php~php;gbkey=misc_feature;gene=trpH;locus_tag=GGE_1527 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10024 10201 . - . ID=id-GGE_1527-4;Note=superfamily%3B label: POLIIIAc superfamily;gbkey=misc_feature;gene=trpH;locus_tag=GGE_1527 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10042 10543 . + . ID=id-AFQR01000027.1:10042..10543;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10339 10489 . + . ID=id-AFQR01000027.1:10339..10489;Note=Gene3D:3.20.20.140;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10553 10562 . + . ID=id-AFQR01000027.1:10553..10562;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 10830 11234 . - . ID=gene-GGE_1528;Name=GGE_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1528 GCA_000222085.2|AFQR01000027.1 Genbank CDS 10830 11234 . - 0 ID=cds-EGT80820.1;Parent=gene-GGE_1528;Dbxref=InterPro:IPR001295,InterPro:IPR012135,InterPro:IPR013785,PFAM:PF01180,NCBI_GP:EGT80820.1;Name=EGT80820.1;Note=Hypothetical dihydroorotate dehydrogenase%2C class 1/ 2;Ontology_term=GO:0006207,GO:0006222,GO:0008152,GO:0055114,GO:0003824,GO:0004152;gbkey=CDS;go_function=catalytic activity|0003824||,dihydroorotate dehydrogenase activity|0004152||;go_process='de novo' pyrimidine base biosynthetic process|0006207||,UMP biosynthetic process|0006222||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1528;product=putative dihydroorotate dehydrogenase%2C class 1/ 2;protein_id=EGT80820.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10839 11223 . - . ID=id-GGE_1528;Note=superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;locus_tag=GGE_1528 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10851 11211 . - . ID=id-GGE_1528-2;Dbxref=InterPro:IPR012135,InterPro:IPR013785,PFAM:PF01180;Note=Gene3D:3.20.20.70~aldolase-type tim barrel~dho_dh~dihydroorotate dehydrogenase%2C class 1/ 2;gbkey=misc_feature;locus_tag=GGE_1528 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10854 11208 . - . ID=id-GGE_1528-3;Note=HMMPanther:PTHR11938:SF32~dihydroorotate dehydrogenase~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;locus_tag=GGE_1528 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10857 11205 . - . ID=id-GGE_1528-4;Note=superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;locus_tag=GGE_1528 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10869 11085 . + . ID=id-AFQR01000027.1:10869..11085;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 10893 11097 . + . ID=id-AFQR01000027.1:10893..11097;Dbxref=InterPro:IPR001295;Note=PatternScan:PS00912~dhodehase_2~dihydroorotate dehydrogenase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 11289 11849 . - . ID=gene-GGE_1529;Name=GGE_1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1529 GCA_000222085.2|AFQR01000027.1 Genbank CDS 11289 11849 . - 0 ID=cds-EGT80821.1;Parent=gene-GGE_1529;Dbxref=InterPro:IPR001295,InterPro:IPR012135,InterPro:IPR013785,PFAM:PF01180,NCBI_GP:EGT80821.1;Name=EGT80821.1;Note=Hypothetical dihydroorotate dehydrogenase%2C class 1/ 2;Ontology_term=GO:0006207,GO:0006222,GO:0008152,GO:0055114,GO:0003824,GO:0004152;gbkey=CDS;go_function=catalytic activity|0003824||,dihydroorotate dehydrogenase activity|0004152||;go_process='de novo' pyrimidine base biosynthetic process|0006207||,UMP biosynthetic process|0006222||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1529;product=putative dihydroorotate dehydrogenase%2C class 1/ 2;protein_id=EGT80821.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11289 11847 . - . ID=id-GGE_1529;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel~superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;locus_tag=GGE_1529 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11316 11823 . - . ID=id-GGE_1529-2;Note=specific~superfamily~HMMPanther:PTHR11938:SF32~dihydroorotate dehydrogenase~HMMPanther:PTHR11938~family not named%3B label: DHOD_2_like;gbkey=misc_feature;locus_tag=GGE_1529 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11439 11700 . - . ID=id-GGE_1529-3;Dbxref=InterPro:IPR012135,PFAM:PF01180;Note=dho_dh~dihydroorotate dehydrogenase%2C class 1/ 2;gbkey=misc_feature;locus_tag=GGE_1529 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11328 11619 . + . ID=id-AFQR01000027.1:11328..11619;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11349 11535 . + . ID=id-AFQR01000027.1:11349..11535;Dbxref=InterPro:IPR001295;Note=PatternScan:PS00911~dhodehase_1~dihydroorotate dehydrogenase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11883 11892 . + . ID=id-AFQR01000027.1:11883..11892;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 11901 11910 . - . ID=id-AFQR01000027.1:11901..11910;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 12102 13694 . + . ID=gene-GGE_1530;Name=GGE_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank CDS 12102 13694 . + 0 ID=cds-EGT80822.1;Parent=gene-GGE_1530;Dbxref=GeneID:260182088,InterPro:IPR000917,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884,NCBI_GP:EGT80822.1;Name=EGT80822.1;Note=ACX35578;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_1530;product=phosphoethanolamine transferase;protein_id=EGT80822.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12111 13674 . + . ID=id-GGE_1530;Note=multi-dom%3B label: COG2194;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12123 12156 . + . ID=id-GGE_1530-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12747 12828 . + . ID=id-GGE_1530-3;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12753 12894 . + . ID=id-GGE_1530-4;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12753 12858 . + . ID=id-GGE_1530-5;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12753 12831 . + . ID=id-GGE_1530-6;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature;locus_tag=GGE_1530 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12129 12234 . - . ID=id-AFQR01000027.1:12129..12234;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12162 12519 . - . ID=id-AFQR01000027.1:12162..12519;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12162 12282 . - . ID=id-AFQR01000027.1:12162..12282;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12162 12204 . - . ID=id-AFQR01000027.1:12162..12204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 12171 12432 . - . ID=id-AFQR01000027.1:12171..12432;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13789 13798 . + . ID=id-AFQR01000027.1:13789..13798;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 13886 16168 . - . ID=gene-GGE_1531;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank CDS 13886 16168 . - 0 ID=cds-EGT80823.1;Parent=gene-GGE_1531;Dbxref=GeneID:166233718,InterPro:IPR002629,InterPro:IPR006276,InterPro:IPR013215,PFAM:PF01717,PFAM:PF08267,PIR:PIRSF000382,TIGRFAM:TIGR01371,NCBI_GP:EGT80823.1;Name=EGT80823.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||,zinc ion binding|0008270||;go_process=cellular amino acid biosynthetic process|0008652||,methionine biosynthetic process|0009086||;locus_tag=GGE_1531;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=EGT80823.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13898 16157 . - . ID=id-GGE_1531;Dbxref=InterPro:IPR006276,PIR:PIRSF000382;Note=cobalamin-independent methionine synthase~cobalamin-independent methionine synthase;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13901 16154 . - . ID=id-GGE_1531-2;Note=multi-dom%3B label: PRK05222;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13901 15056 . - . ID=id-GGE_1531-3;Note=superfamily:SSF51726~urod/mete-like;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13904 16145 . - . ID=id-GGE_1531-4;Dbxref=InterPro:IPR006276;Note=HAMAP:MF_00172~meth_synth~cobalamin-independent methionine synthase;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13904 15041 . - . ID=id-GGE_1531-5;Note=Gene3D:3.20.20.210;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13907 14960 . - . ID=id-GGE_1531-6;Note=specific~superfamily%3B label: CIMS_N_terminal_like;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13910 14801 . - . ID=id-GGE_1531-7;Dbxref=InterPro:IPR013215,PFAM:PF08267;Note=meth_synt_1~cobalamin (vitamin b12)-independent methionine synthase mete;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13913 15494 . - . ID=id-GGE_1531-8;Note=HMMPanther:PTHR19960:SF21~5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase~HMMPanther:PTHR19960~family not named;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13919 16130 . - . ID=id-GGE_1531-9;Dbxref=InterPro:IPR006276,TIGRFAM:TIGR01371;Note=met_syn_b12ind: 5-methyltetrahydropter~cobalamin-independent methionine synthase;gbkey=misc_feature;gene=metE;locus_tag=GGE_1531 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13922 15848 . + . ID=id-AFQR01000027.1:13922..15848;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 13940 14996 . + . ID=id-AFQR01000027.1:13940..14996;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 14852 15182 . + . ID=id-AFQR01000027.1:14852..15182;Note=specific~superfamily%3B label: CIMS_C_terminal_like;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 14855 15179 . + . ID=id-AFQR01000027.1:14855..15179;Dbxref=InterPro:IPR002629,PFAM:PF01717;Note=meth_synt_2~methionine synthase%2C vitamin-b12 independent;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 14978 15071 . + . ID=id-AFQR01000027.1:14978..15071;Note=superfamily:SSF51726~urod/mete-like;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 14990 15062 . + . ID=id-AFQR01000027.1:14990..15062;Note=Gene3D:3.20.20.210;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 15135 15144 . + . ID=id-AFQR01000027.1:15135..15144;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 16346 16355 . - . ID=id-AFQR01000027.1:16346..16355;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 16356 17216 . - . ID=gene-GGE_1532;Name=GGE_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1532 GCA_000222085.2|AFQR01000027.1 Genbank CDS 16356 17216 . - 0 ID=cds-EGT80824.1;Parent=gene-GGE_1532;Dbxref=GeneID:255994153,InterPro:IPR003497,PFAM:PF02498,NCBI_GP:EGT80824.1;Name=EGT80824.1;Note=ZP_05427288;gbkey=CDS;locus_tag=GGE_1532;product=prophage antirepressor;protein_id=EGT80824.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 16392 16650 . - . ID=id-GGE_1532;Note=superfamily%3B label: Bro-N superfamily;gbkey=misc_feature;locus_tag=GGE_1532 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 16392 16647 . - . ID=id-GGE_1532-2;Dbxref=InterPro:IPR003497,PFAM:PF02498;Note=bro-n~bro;gbkey=misc_feature;locus_tag=GGE_1532 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 16683 16719 . + . ID=id-AFQR01000027.1:16683..16719;Note=superfamily%3B label: dinD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 17250 19859 . - . ID=gene-GGE_1533;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank CDS 17250 19859 . - 0 ID=cds-EGT80825.1;Parent=gene-GGE_1533;Dbxref=GeneID:1168446,InterPro:IPR001930,InterPro:IPR012779,InterPro:IPR014782,PFAM:PF01433,PFAM:PF11940,TIGRFAM:TIGR02414,NCBI_GP:EGT80825.1;Name=EGT80825.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=metallopeptidase activity|0008237||,zinc ion binding|0008270||;go_process=proteolysis|0006508||;locus_tag=GGE_1533;product=Aminopeptidase N;protein_id=EGT80825.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17250 19857 . - . ID=id-GGE_1533;Note=multi-dom%3B label: pepN;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17250 17832 . - . ID=id-GGE_1533-2;Note=superfamily:SSF63737~leukotriene a4 hydrolase n-terminal domain;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17265 19818 . - . ID=id-GGE_1533-3;Dbxref=InterPro:IPR001930,InterPro:IPR012779;Note=HMMPanther:PTHR11533:SF8~aminopeptidase~peptidase m1%2C alanyl aminopeptidase~HMMPanther:PTHR11533~family not named~peptidase m1%2C alanine aminopeptidase/leukotriene a4 hydrolase;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17280 19827 . - . ID=id-GGE_1533-4;Dbxref=InterPro:IPR012779,TIGRFAM:TIGR02414;Note=specific~superfamily~pepn_proteo: aminopeptidase n~peptidase m1%2C alanyl aminopeptidase%3B label: GluZincin superfamily;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17295 18363 . - . ID=id-GGE_1533-5;Dbxref=InterPro:IPR014782,PFAM:PF01433;Note=peptidase_m1~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17859 17997 . - . ID=id-GGE_1533-6;Note=superfamily:SSF55486~metalloproteases ('zincins')%2C catalytic domain;gbkey=misc_feature;gene=pepN;locus_tag=GGE_1533 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17283 18027 . + . ID=id-AFQR01000027.1:17283..18027;Dbxref=InterPro:IPR014782;Note=FPrintScan:PR00756~aladiptase~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17289 18192 . + . ID=id-AFQR01000027.1:17289..18192;Dbxref=InterPro:IPR014782;Note=FPrintScan:PR00756~aladiptase~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17298 18135 . + . ID=id-AFQR01000027.1:17298..18135;Dbxref=InterPro:IPR014782;Note=FPrintScan:PR00756~aladiptase~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17298 17781 . + . ID=id-AFQR01000027.1:17298..17781;Dbxref=InterPro:IPR014782;Note=FPrintScan:PR00756~aladiptase~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 17298 17631 . + . ID=id-AFQR01000027.1:17298..17631;Dbxref=InterPro:IPR014782;Note=FPrintScan:PR00756~aladiptase~peptidase m1%2C membrane alanine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 18058 18067 . + . ID=id-AFQR01000027.1:18058..18067;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 18219 18891 . + . ID=id-AFQR01000027.1:18219..18891;Note=Gene3D:1.25.50.10;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 18483 18627 . + . ID=id-AFQR01000027.1:18483..18627;Dbxref=PFAM:PF11940;Note=duf3458;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 20197 20466 . + . ID=gene-GGE_1534;Name=GGE_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank CDS 20197 20466 . + 0 ID=cds-EGT80826.1;Parent=gene-GGE_1534;Dbxref=InterPro:IPR011054,InterPro:IPR013816,NCBI_GP:EGT80826.1;Name=EGT80826.1;Note=Hypothetical aTP-grasp fold%2C subdomain 2;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||,ligase activity|0016874||;locus_tag=GGE_1534;product=putative aTP-grasp fold%2C subdomain 2;protein_id=EGT80826.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20197 20452 . + . ID=id-GGE_1534;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20197 20443 . + . ID=id-GGE_1534-2;Note=multi-dom%3B label: PurK;gbkey=misc_feature;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20197 20437 . + . ID=id-GGE_1534-3;Note=HMMPanther:PTHR23047:SF1~phosphoribosylaminoimidazole carboxylase atpase-subunit~HMMPanther:PTHR23047~family not named;gbkey=misc_feature;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20224 20434 . + . ID=id-GGE_1534-4;Dbxref=InterPro:IPR011054;Note=superfamily:SSF51246~rudiment single hybrid motif~rudiment single hybrid motif;gbkey=misc_feature;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20317 20443 . + . ID=id-GGE_1534-5;Note=multi-dom%3B label: PurK;gbkey=misc_feature;locus_tag=GGE_1534 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20472 20481 . - . ID=id-AFQR01000027.1:20472..20481;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20504 20513 . + . ID=id-AFQR01000027.1:20504..20513;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 20601 21791 . + . ID=gene-GGE_1535;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank CDS 20601 21791 . + 0 ID=cds-EGT80827.1;Parent=gene-GGE_1535;Dbxref=GeneID:1168262,InterPro:IPR000796,InterPro:IPR004838,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF00155,NCBI_GP:EGT80827.1;Name=EGT80827.1;Ontology_term=GO:0009058,GO:0006520,GO:0003824,GO:0030170,GO:0008483,GO:0016769;gbkey=CDS;gene=aspC;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,transaminase activity|0008483||,transferase activity transferring nitrogenous groups|0016769||;go_process=biosynthetic process|0009058||,cellular amino acid metabolic process|0006520||;locus_tag=GGE_1535;product=Aspartate aminotransferase;protein_id=EGT80827.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20601 21789 . + . ID=id-GGE_1535;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=aspC;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20607 21783 . + . ID=id-GGE_1535-2;Dbxref=InterPro:IPR000796;Note=HMMPanther:PTHR11879~family not named~aspartate/other aminotransferase;gbkey=misc_feature;gene=aspC;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20682 21699 . + . ID=id-GGE_1535-3;Dbxref=InterPro:IPR004839,PFAM:PF00155;Note=aminotran_1_2~aminotransferase%2C class i/classii;gbkey=misc_feature;gene=aspC;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20688 21699 . + . ID=id-GGE_1535-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=aspC;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20739 21411 . + . ID=id-GGE_1535-5;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=aspC;locus_tag=GGE_1535 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20640 21219 . - . ID=id-AFQR01000027.1:20640..21219;Dbxref=InterPro:IPR000796;Note=FPrintScan:PR00799~transaminase~aspartate/other aminotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20643 21330 . - . ID=id-AFQR01000027.1:20643..21330;Dbxref=InterPro:IPR004838;Note=PatternScan:PS00105~aa_transfer_class_1~aminotransferases%2C class-i%2C pyridoxal-phosphate-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20658 21624 . - . ID=id-AFQR01000027.1:20658..21624;Dbxref=InterPro:IPR000796;Note=FPrintScan:PR00799~transaminase~aspartate/other aminotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20661 21126 . - . ID=id-AFQR01000027.1:20661..21126;Dbxref=InterPro:IPR000796;Note=FPrintScan:PR00799~transaminase~aspartate/other aminotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20679 21420 . - . ID=id-AFQR01000027.1:20679..21420;Dbxref=InterPro:IPR000796;Note=FPrintScan:PR00799~transaminase~aspartate/other aminotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 20688 21513 . - . ID=id-AFQR01000027.1:20688..21513;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 21832 24441 . - . ID=gene-GGE_1536;Name=GGE_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank CDS 21832 24441 . - 0 ID=cds-EGT80828.1;Parent=gene-GGE_1536;Dbxref=GeneID:325578403,InterPro:IPR006935,PFAM:PF04851,NCBI_GP:EGT80828.1;Name=EGT80828.1;Note=ZP_08148538;Ontology_term=GO:0005524,GO:0003677,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,hydrolase activity|0016787||;locus_tag=GGE_1536;product=type III site-specific deoxyribonuclease;protein_id=EGT80828.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 21832 23485 . - . ID=id-GGE_1536;Note=multi-dom%3B label: COG3587;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 21832 22570 . - . ID=id-GGE_1536-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 21856 22519 . - . ID=id-GGE_1536-3;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 22060 23296 . - . ID=id-GGE_1536-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 22060 22321 . - . ID=id-GGE_1536-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 22615 22624 . - . ID=id-GGE_1536-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1536 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 21877 21994 . + . ID=id-AFQR01000027.1:21877..21994;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 21973 22057 . + . ID=id-AFQR01000027.1:21973..22057;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 22867 23401 . + . ID=id-AFQR01000027.1:22867..23401;Note=multi-dom%3B label: COG3587;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24226 24235 . + . ID=id-AFQR01000027.1:24226..24235;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 24451 26229 . - . ID=gene-GGE_1537;Name=GGE_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank CDS 24451 26229 . - 0 ID=cds-EGT80829.1;Parent=gene-GGE_1537;Dbxref=GeneID:325578404,InterPro:IPR002052,InterPro:IPR002295,InterPro:IPR002941,PFAM:PF01555,NCBI_GP:EGT80829.1;Name=EGT80829.1;Note=ZP_08148539;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676;gbkey=CDS;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_1537;product=type III restriction-modification system methyltransferase;protein_id=EGT80829.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24463 24487 . - . ID=id-GGE_1537;Note=seg;gbkey=misc_feature;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24658 25570 . - . ID=id-GGE_1537-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24662 24671 . - . ID=id-GGE_1537-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24760 25393 . - . ID=id-GGE_1537-4;Dbxref=InterPro:IPR002941,PFAM:PF01555;Note=n6_n4_mtase~dna methylase n-4/n-6;gbkey=misc_feature;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24760 24958 . - . ID=id-GGE_1537-5;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_1537 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24472 24769 . + . ID=id-AFQR01000027.1:24472..24769;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24490 26068 . + . ID=id-AFQR01000027.1:24490..26068;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24490 24760 . + . ID=id-AFQR01000027.1:24490..24760;Dbxref=InterPro:IPR002295;Note=FPrintScan:PR00506~d21n6mtfrase~n6 adenine-specific dna methyltransferase%2C d21 class;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24496 25609 . + . ID=id-AFQR01000027.1:24496..25609;Dbxref=InterPro:IPR002295;Note=FPrintScan:PR00506~d21n6mtfrase~n6 adenine-specific dna methyltransferase%2C d21 class;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24511 24958 . + . ID=id-AFQR01000027.1:24511..24958;Dbxref=InterPro:IPR002295;Note=FPrintScan:PR00506~d21n6mtfrase~n6 adenine-specific dna methyltransferase%2C d21 class;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24517 24814 . + . ID=id-AFQR01000027.1:24517..24814;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24520 25540 . + . ID=id-AFQR01000027.1:24520..25540;Dbxref=InterPro:IPR002295;Note=FPrintScan:PR00506~d21n6mtfrase~n6 adenine-specific dna methyltransferase%2C d21 class;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24580 24679 . + . ID=id-AFQR01000027.1:24580..24679;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24604 25549 . + . ID=id-AFQR01000027.1:24604..25549;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 24880 25372 . + . ID=id-AFQR01000027.1:24880..25372;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 26402 26854 . - . ID=gene-GGE_1538;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=GGE_1538 GCA_000222085.2|AFQR01000027.1 Genbank CDS 26402 26854 . - 0 ID=cds-EGT80830.1;Parent=gene-GGE_1538;Dbxref=GeneID:1170984,InterPro:IPR003448,PFAM:PF02391,NCBI_GP:EGT80830.1;Name=EGT80830.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||;locus_tag=GGE_1538;product=Molybdopterin synthase catalytic subunit;protein_id=EGT80830.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26408 26849 . - . ID=id-GGE_1538;Dbxref=InterPro:IPR003448;Note=superfamily:SSF54690~molybdopterin synthase subunit moae~molybdopterin biosynthesis moae;gbkey=misc_feature;gene=moaE;locus_tag=GGE_1538 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26411 26846 . - . ID=id-GGE_1538-2;Dbxref=InterPro:IPR003448;Note=Gene3D:3.90.1170.40~molybdopterin biosynthesis moae~HMMPanther:PTHR23404:SF2~molybdopterin synthase large subunit 2~molybdopterin biosynthesis moae~HMMPanther:PTHR23404~family not named;gbkey=misc_feature;gene=moaE;locus_tag=GGE_1538 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26417 26753 . - . ID=id-GGE_1538-3;Dbxref=InterPro:IPR003448,PFAM:PF02391;Note=moae~molybdopterin biosynthesis moae;gbkey=misc_feature;gene=moaE;locus_tag=GGE_1538 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26441 26777 . - . ID=id-GGE_1538-4;Note=specific~superfamily%3B label: MoaE;gbkey=misc_feature;gene=moaE;locus_tag=GGE_1538 GCA_000222085.2|AFQR01000027.1 Genbank gene 26855 27100 . - . ID=gene-GGE_1539;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank CDS 26855 27100 . - 0 ID=cds-EGT80831.1;Parent=gene-GGE_1539;Dbxref=GeneID:2507066,InterPro:IPR003749,InterPro:IPR010034,InterPro:IPR012675,InterPro:IPR016155,PFAM:PF02597,TIGRFAM:TIGR01682,NCBI_GP:EGT80831.1;Name=EGT80831.1;Ontology_term=GO:0006777,GO:0006790;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||,sulfur compound metabolic process|0006790||;locus_tag=GGE_1539;product=Molybdopterin synthase sulfur carrier subunit;protein_id=EGT80831.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26855 27098 . - . ID=id-GGE_1539;Dbxref=InterPro:IPR012675,InterPro:IPR016155;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type~superfamily:SSF54285~moad/this~molybdopterin synthase/thiamin biosynthesis sulphur carrier%2C beta-grasp;gbkey=misc_feature;gene=moaD;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26861 27095 . - . ID=id-GGE_1539-2;Dbxref=InterPro:IPR010034,TIGRFAM:TIGR01682;Note=moad: molybdopterin converting factor%2C subun~molybdopterin converting factor%2C subunit 1;gbkey=misc_feature;gene=moaD;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26864 27092 . - . ID=id-GGE_1539-3;Note=specific~superfamily%3B label: MoaD;gbkey=misc_feature;gene=moaD;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26867 27089 . - . ID=id-GGE_1539-4;Dbxref=InterPro:IPR003749,PFAM:PF02597;Note=this~thiamines;gbkey=misc_feature;gene=moaD;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 26903 26912 . - . ID=id-GGE_1539-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=moaD;locus_tag=GGE_1539 GCA_000222085.2|AFQR01000027.1 Genbank gene 27102 27584 . - . ID=gene-GGE_1540;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank CDS 27102 27584 . - 0 ID=cds-EGT80832.1;Parent=gene-GGE_1540;Dbxref=GeneID:1170982,InterPro:IPR002820,InterPro:IPR023045,PFAM:PF01967,TIGRFAM:TIGR00581,NCBI_GP:EGT80832.1;Name=EGT80832.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaC;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||;locus_tag=GGE_1540;product=Molybdenum cofactor biosynthesis protein C;protein_id=EGT80832.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27102 27579 . - . ID=id-GGE_1540;Note=HMMPanther:PTHR26250~family not named;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27111 27570 . - . ID=id-GGE_1540-2;Dbxref=InterPro:IPR002820;Note=Gene3D:3.30.70.640~molybdopterin cofactor biosynthesis c (moac) domain;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27114 27549 . - . ID=id-GGE_1540-3;Dbxref=InterPro:IPR023045,TIGRFAM:TIGR00581;Note=moac: molybdenum cofactor biosynthesis prote~molybdenum cofactor biosynthesis c;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27135 27540 . - . ID=id-GGE_1540-4;Dbxref=InterPro:IPR002820;Note=superfamily:SSF55040~molybdenum cofactor biosynthesis protein c%2C moac~molybdopterin cofactor biosynthesis c (moac) domain;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27147 27522 . - . ID=id-GGE_1540-5;Note=specific~superfamily%3B label: MoaC superfamily;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27147 27510 . - . ID=id-GGE_1540-6;Dbxref=InterPro:IPR002820,PFAM:PF01967;Note=moac~molybdopterin cofactor biosynthesis c (moac) domain;gbkey=misc_feature;gene=moaC;locus_tag=GGE_1540 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27592 27601 . + . ID=id-AFQR01000027.1:27592..27601;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 27673 28686 . - . ID=gene-GGE_1541;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank CDS 27673 28686 . - 0 ID=cds-EGT80833.1;Parent=gene-GGE_1541;Dbxref=GeneID:1170981,InterPro:IPR000385,InterPro:IPR007197,InterPro:IPR010505,InterPro:IPR013483,InterPro:IPR013785,PFAM:PF04055,PFAM:PF06463,TIGRFAM:TIGR02666,NCBI_GP:EGT80833.1;Name=EGT80833.1;Ontology_term=GO:0006777,GO:0008152,GO:0019008,GO:0051539,GO:0003824,GO:0051536,GO:0046872;gbkey=CDS;gene=moaA;go_component=molybdopterin synthase complex|0019008||;go_function=4 iron 4 sulfur cluster binding|0051539||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,metal ion binding|0046872||;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||,metabolic process|0008152||;locus_tag=GGE_1541;product=Molybdenum cofactor biosynthesis protein A;protein_id=EGT80833.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27694 28666 . - . ID=id-GGE_1541;Note=multi-dom%3B label: moaA;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27706 28600 . - . ID=id-GGE_1541-2;Note=HMMPanther:PTHR22960~family not named;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27715 28645 . - . ID=id-GGE_1541-3;Dbxref=InterPro:IPR013483,TIGRFAM:TIGR02666;Note=moaa: molybdenum cofactor biosynthesis prote~molybdenum cofactor biosynthesis protein a;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27715 28492 . - . ID=id-GGE_1541-4;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27736 28222 . - . ID=id-GGE_1541-5;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27754 28138 . - . ID=id-GGE_1541-6;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27757 28150 . - . ID=id-GGE_1541-7;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=moaA;locus_tag=GGE_1541 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 27709 27760 . + . ID=id-AFQR01000027.1:27709..27760;Dbxref=InterPro:IPR000385;Note=PatternScan:PS01305~moaa_nifb_pqqe~moaa/nifb/pqqe%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 28054 28255 . + . ID=id-AFQR01000027.1:28054..28255;Dbxref=InterPro:IPR010505,PFAM:PF06463;Note=superfamily~mob_synth_c~molybdenum cofactor synthesis c-terminal%3B label: Mob_synth_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 29131 29802 . + . ID=gene-GGE_1542;Name=GGE_1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank CDS 29131 29802 . + 0 ID=cds-EGT80834.1;Parent=gene-GGE_1542;Dbxref=GeneID:1176920,InterPro:IPR007500,InterPro:IPR012312,InterPro:IPR019903,PFAM:PF01814,PFAM:PF04405,TIGRFAM:TIGR03652,NCBI_GP:EGT80834.1;Name=EGT80834.1;Note=HI_1677;gbkey=CDS;locus_tag=GGE_1542;product=putative hemerythrin HHE cation-binding domain-containing protein;protein_id=EGT80834.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29131 29800 . + . ID=id-GGE_1542;Note=multi-dom%3B label: PRK10992;gbkey=misc_feature;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29143 29299 . + . ID=id-GGE_1542-2;Note=superfamily%3B label: DUF1858 superfamily;gbkey=misc_feature;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29146 29296 . + . ID=id-GGE_1542-3;Dbxref=InterPro:IPR007500,PFAM:PF04405;Note=scda_n~domain of unknown function duf542%2C scda n-terminal;gbkey=misc_feature;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29155 29767 . + . ID=id-GGE_1542-4;Dbxref=InterPro:IPR019903,TIGRFAM:TIGR03652;Note=fes_repair_ric: iron-sulfur cluster re~repair of iron centres family;gbkey=misc_feature;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29374 29551 . + . ID=id-GGE_1542-5;Note=Gene3D:1.20.120.520;gbkey=misc_feature;locus_tag=GGE_1542 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29197 29488 . - . ID=id-AFQR01000027.1:29197..29488;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29218 29254 . - . ID=id-AFQR01000027.1:29218..29254;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29320 29596 . - . ID=id-AFQR01000027.1:29320..29596;Dbxref=InterPro:IPR012312,PFAM:PF01814;Note=hemerythrin~haemerythrin/hhe cation-binding motif;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29323 29596 . - . ID=id-AFQR01000027.1:29323..29596;Note=superfamily%3B label: Hemerythrin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29323 29371 . - . ID=id-AFQR01000027.1:29323..29371;Dbxref=InterPro:IPR012312,PFAM:PF01814;Note=hemerythrin~haemerythrin/hhe cation-binding motif;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29326 29368 . - . ID=id-AFQR01000027.1:29326..29368;Note=superfamily%3B label: Hemerythrin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29823 29832 . - . ID=id-AFQR01000027.1:29823..29832;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 29855 29864 . + . ID=id-AFQR01000027.1:29855..29864;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 30338 31351 . + . ID=gene-GGE_1543;Name=GGE_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank CDS 30338 31351 . + 0 ID=cds-EGT80835.1;Parent=gene-GGE_1543;Dbxref=GeneID:1176843,InterPro:IPR000644,InterPro:IPR001347,InterPro:IPR004800,InterPro:IPR013785,PFAM:PF00571,PFAM:PF01380,TIGRFAM:TIGR00393,NCBI_GP:EGT80835.1;Name=EGT80835.1;Note=HI_1678;Ontology_term=GO:0005975,GO:0008152,GO:0003824,GO:0016853,GO:0005515,GO:0005529;gbkey=CDS;go_function=catalytic activity|0003824||,isomerase activity|0016853||,protein binding|0005515||,sugar binding|0005529||;go_process=carbohydrate metabolic process|0005975||,metabolic process|0008152||;locus_tag=GGE_1543;product=Putative phosphosugar isomerase;protein_id=EGT80835.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30419 31259 . + . ID=id-GGE_1543;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30428 30908 . + . ID=id-GGE_1543-2;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30512 30770 . + . ID=id-GGE_1543-3;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30527 30731 . + . ID=id-GGE_1543-4;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30539 31142 . + . ID=id-GGE_1543-5;Dbxref=InterPro:IPR004800,TIGRFAM:TIGR00393;Note=multi-dom~kpsf: sugar isomerase%2C kpsf/gutq family~kpsf/gutq%3B label: kpsF;gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30539 30722 . + . ID=id-GGE_1543-6;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;locus_tag=GGE_1543 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30377 30551 . - . ID=id-AFQR01000027.1:30377..30551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30476 31214 . - . ID=id-AFQR01000027.1:30476..31214;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30479 31202 . - . ID=id-AFQR01000027.1:30479..31202;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30503 31007 . - . ID=id-AFQR01000027.1:30503..31007;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30509 31019 . - . ID=id-AFQR01000027.1:30509..31019;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30656 31022 . - . ID=id-AFQR01000027.1:30656..31022;Note=specific~superfamily%3B label: CBS_pair superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30683 30998 . - . ID=id-AFQR01000027.1:30683..30998;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 30725 30953 . - . ID=id-AFQR01000027.1:30725..30953;Note=HMMPanther:PTHR11911~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 31361 31903 . + . ID=gene-GGE_1544;Name=GGE_1544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank CDS 31361 31903 . + 0 ID=cds-EGT80836.1;Parent=gene-GGE_1544;Dbxref=GeneID:1176845,InterPro:IPR006549,InterPro:IPR010023,InterPro:IPR013200,InterPro:IPR023214,PFAM:PF08282,PIR:PIRSF006118,TIGRFAM:TIGR01662,TIGRFAM:TIGR01670,NCBI_GP:EGT80836.1;Name=EGT80836.1;Note=HI_1679;Ontology_term=GO:0009103,GO:0019143;gbkey=CDS;go_function=3-deoxy-manno-octulosonate-8-phosphatase activity|0019143||;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_1544;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=EGT80836.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31361 31880 . + . ID=id-GGE_1544;Dbxref=InterPro:IPR010023,PIR:PIRSF006118;Note=3-deoxy-d-manno-octulosonate 8-phosphate phosphatase~3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31370 31841 . + . ID=id-GGE_1544-2;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31373 31841 . + . ID=id-GGE_1544-3;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31373 31835 . + . ID=id-GGE_1544-4;Note=HMMPanther:PTHR26053~family not named;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31385 31823 . + . ID=id-GGE_1544-5;Dbxref=InterPro:IPR010023,TIGRFAM:TIGR01670;Note=yrbi-phosphatas: 3-deoxy-d-manno-octu~3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31388 31718 . + . ID=id-GGE_1544-6;Dbxref=InterPro:IPR006549,TIGRFAM:TIGR01662;Note=had-sf-iiia: had hydrolase%2C family ii~had-superfamily hydrolase%2C subfamily iiia;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31394 31703 . + . ID=id-GGE_1544-7;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature;locus_tag=GGE_1544 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31544 31607 . - . ID=id-AFQR01000027.1:31544..31607;Dbxref=InterPro:IPR013200,PFAM:PF08282;Note=hydrolase_3~had superfamily hydrolase-like%2C type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31556 31649 . - . ID=id-AFQR01000027.1:31556..31649;Note=multi-dom%3B label: SPP-subfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31939 31948 . + . ID=id-AFQR01000027.1:31939..31948;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 31985 31994 . - . ID=id-AFQR01000027.1:31985..31994;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 32035 34170 . - . ID=gene-GGE_1545;Name=GGE_1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1545 GCA_000222085.2|AFQR01000027.1 Genbank CDS 32035 34170 . - 0 ID=cds-EGT80837.1;Parent=gene-GGE_1545;Dbxref=GeneID:1176248,InterPro:IPR010019,InterPro:IPR010020,TIGRFAM:TIGR01666,TIGRFAM:TIGR01667,NCBI_GP:EGT80837.1;Name=EGT80837.1;Note=HI_1680;gbkey=CDS;locus_tag=GGE_1545;product=putative integral membrane protein%2C YccS;protein_id=EGT80837.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32041 34159 . - . ID=id-GGE_1545;Dbxref=InterPro:IPR010019,InterPro:IPR010020,TIGRFAM:TIGR01666,TIGRFAM:TIGR01667;Note=superfamily~multi-dom~yccs: hypothetical membrane protein%2C tigr01~integral membrane protein%2C yccs~yccs_yhjk: integral membrane protein%2C yccs/~integral membrane protein%2C yccs/yhfk%3B label: YCCS superfamily;gbkey=misc_feature;locus_tag=GGE_1545 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32056 32104 . - . ID=id-GGE_1545-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1545 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32089 32290 . + . ID=id-AFQR01000027.1:32089..32290;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32095 33337 . + . ID=id-AFQR01000027.1:32095..33337;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32095 32353 . + . ID=id-AFQR01000027.1:32095..32353;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32095 32218 . + . ID=id-AFQR01000027.1:32095..32218;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32101 34021 . + . ID=id-AFQR01000027.1:32101..34021;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32101 33016 . + . ID=id-AFQR01000027.1:32101..33016;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32104 33541 . + . ID=id-AFQR01000027.1:32104..33541;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32104 33439 . + . ID=id-AFQR01000027.1:32104..33439;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32104 33208 . + . ID=id-AFQR01000027.1:32104..33208;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32104 32425 . + . ID=id-AFQR01000027.1:32104..32425;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 32110 33409 . + . ID=id-AFQR01000027.1:32110..33409;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 33521 33530 . + . ID=id-AFQR01000027.1:33521..33530;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34224 34233 . + . ID=id-AFQR01000027.1:34224..34233;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 34237 34905 . - . ID=gene-GGE_1546;Name=GGE_1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1546 GCA_000222085.2|AFQR01000027.1 Genbank CDS 34237 34905 . - 0 ID=cds-EGT80838.1;Parent=gene-GGE_1546;Dbxref=InterPro:IPR018635,PFAM:PF09829,NCBI_GP:EGT80838.1;Name=EGT80838.1;Note=CGSHiGG_02140;gbkey=CDS;locus_tag=GGE_1546;product=UPF0319 protein;protein_id=EGT80838.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34237 34903 . - . ID=id-GGE_1546;Note=superfamily%3B label: DUF2057 superfamily;gbkey=misc_feature;locus_tag=GGE_1546 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34249 34888 . - . ID=id-GGE_1546-2;Dbxref=InterPro:IPR018635;Note=HAMAP:MF_00789~upf0319~uncharacterised protein family upf0319;gbkey=misc_feature;locus_tag=GGE_1546 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34252 34306 . - . ID=id-GGE_1546-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1546 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34309 34819 . - . ID=id-GGE_1546-4;Dbxref=InterPro:IPR018635,PFAM:PF09829;Note=duf2057~uncharacterised protein family upf0319;gbkey=misc_feature;locus_tag=GGE_1546 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 34291 34696 . + . ID=id-AFQR01000027.1:34291..34696;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 35113 36174 . + . ID=gene-GGE_1547;Name=GGE_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank CDS 35113 36174 . + 0 ID=cds-EGT80839.1;Parent=gene-GGE_1547;Dbxref=GeneID:16273569,InterPro:IPR002142,InterPro:IPR013703,InterPro:IPR023562,PFAM:PF01343,PFAM:PF08496,NCBI_GP:EGT80839.1;Name=EGT80839.1;Note=NP_439824;Ontology_term=GO:0006508,GO:0005886,GO:0008233,GO:0004252;gbkey=CDS;go_component=plasma membrane|0005886||;go_function=peptidase activity|0008233||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_1547;product=putative periplasmic protease;protein_id=EGT80839.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35125 35587 . + . ID=id-GGE_1547;Dbxref=InterPro:IPR013703,PFAM:PF08496;Note=superfamily~peptidase_s49_n~peptidase s49 proteobacteria%3B label: Peptidase_S49_N superfamily;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35128 36130 . + . ID=id-GGE_1547-2;Note=multi-dom%3B label: PRK11778;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35143 35182 . + . ID=id-GGE_1547-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35146 35176 . + . ID=id-GGE_1547-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35386 35749 . + . ID=id-GGE_1547-5;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35431 35716 . + . ID=id-GGE_1547-6;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35488 35671 . + . ID=id-GGE_1547-7;Dbxref=InterPro:IPR023562;Note=HMMPanther:PTHR10381:SF2~signal peptide peptidase sppa~HMMPanther:PTHR10381~atp-dependent clp protease proteolytic subunit~peptidase s14/s49;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36112 36121 . + . ID=id-GGE_1547-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1547 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35197 35314 . - . ID=id-AFQR01000027.1:35197..35314;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35215 35302 . - . ID=id-AFQR01000027.1:35215..35302;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35227 35929 . - . ID=id-AFQR01000027.1:35227..35929;Note=Gene3D:3.90.226.10;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 35563 35605 . - . ID=id-AFQR01000027.1:35563..35605;Dbxref=InterPro:IPR002142,PFAM:PF01343;Note=peptidase_s49~peptidase s49;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 36352 37203 . + . ID=gene-GGE_1548;Name=GGE_1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1548 GCA_000222085.2|AFQR01000027.1 Genbank CDS 36352 37203 . + 0 ID=cds-EGT80840.1;Parent=gene-GGE_1548;Dbxref=GeneID:319776072,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR007450,PFAM:PF00691,PFAM:PF04355,NCBI_GP:EGT80840.1;Name=EGT80840.1;Note=YP_004138560;Ontology_term=GO:0009279,GO:0016021,GO:0019867;gbkey=CDS;go_component=cell outer membrane|0009279||,integral to membrane|0016021||,outer membrane|0019867||;locus_tag=GGE_1548;product=Outer membrane protein%2C OmpA/MotB;protein_id=EGT80840.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36352 36409 . + . ID=id-GGE_1548;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1548 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36487 36625 . + . ID=id-GGE_1548-2;Note=superfamily%3B label: SmpA_OmlA superfamily;gbkey=misc_feature;locus_tag=GGE_1548 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36538 36559 . + . ID=id-GGE_1548-3;Dbxref=InterPro:IPR007450,PFAM:PF04355;Note=smpa_omla~lipoprotein smpa/omla;gbkey=misc_feature;locus_tag=GGE_1548 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36400 36898 . - . ID=id-AFQR01000027.1:36400..36898;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36403 36943 . - . ID=id-AFQR01000027.1:36403..36943;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36421 36808 . - . ID=id-AFQR01000027.1:36421..36808;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36610 36805 . - . ID=id-AFQR01000027.1:36610..36805;Dbxref=InterPro:IPR006665,PFAM:PF00691;Note=ompa~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36676 36799 . - . ID=id-AFQR01000027.1:36676..36799;Note=specific~superfamily%3B label: OmpA_C-like;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36694 36781 . - . ID=id-AFQR01000027.1:36694..36781;Dbxref=InterPro:IPR006665;Note=Gene3D:3.30.1330.60~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36715 36763 . - . ID=id-AFQR01000027.1:36715..36763;Dbxref=InterPro:IPR006665;Note=superfamily:SSF103088~ompa-like~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 36721 36769 . - . ID=id-AFQR01000027.1:36721..36769;Dbxref=InterPro:IPR006665;Note=ProfileScan:PS51123~ompa_2~outer membrane protein%2C ompa/motb;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 37386 38003 . + . ID=gene-GGE_1549;Name=rnfA;gbkey=Gene;gene=rnfA;gene_biotype=protein_coding;locus_tag=GGE_1549 GCA_000222085.2|AFQR01000027.1 Genbank CDS 37386 38003 . + 0 ID=cds-EGT80841.1;Parent=gene-GGE_1549;Dbxref=GeneID:18202341,InterPro:IPR003667,InterPro:IPR011293,PFAM:PF02508,PIR:PIRSF006102,TIGRFAM:TIGR01943,NCBI_GP:EGT80841.1;Name=EGT80841.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rnfA;go_component=membrane|0016020||;go_process=electron transport chain|0022900||;locus_tag=GGE_1549;product=Electron transport complex protein rnfA;protein_id=EGT80841.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37425 37455 . + . ID=id-GGE_1549;Note=transmembrane_regions;gbkey=misc_feature;gene=rnfA;locus_tag=GGE_1549 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37428 37962 . + . ID=id-GGE_1549-2;Dbxref=InterPro:IPR003667,InterPro:IPR011293,PIR:PIRSF006102;Note=superfamily~HAMAP:MF_00459~rnfa~electron transport complex%2C rnfa~na(+)-translocating nadh-quinone reductase%2C subunits d/e~electron transport complex%2C rnf/nqr%3B label: Rnf-Nqr superfamily;gbkey=misc_feature;gene=rnfA;locus_tag=GGE_1549 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37428 37959 . + . ID=id-GGE_1549-3;Dbxref=InterPro:IPR003667,PFAM:PF02508;Note=rnf-nqr~electron transport complex%2C rnf/nqr;gbkey=misc_feature;gene=rnfA;locus_tag=GGE_1549 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37431 37956 . + . ID=id-GGE_1549-4;Dbxref=InterPro:IPR011293,TIGRFAM:TIGR01943;Note=rnfa: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfa;gbkey=misc_feature;gene=rnfA;locus_tag=GGE_1549 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37434 37770 . - . ID=id-AFQR01000027.1:37434..37770;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37932 . - . ID=id-AFQR01000027.1:37455..37932;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37842 . - . ID=id-AFQR01000027.1:37455..37842;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37821 . - . ID=id-AFQR01000027.1:37455..37821;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37734 . - . ID=id-AFQR01000027.1:37455..37734;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37638 . - . ID=id-AFQR01000027.1:37455..37638;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 37455 37536 . - . ID=id-AFQR01000027.1:37455..37536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 38091 38672 . + . ID=gene-GGE_1550;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank CDS 38091 38672 . + 0 ID=cds-EGT80842.1;Parent=gene-GGE_1550;Dbxref=GeneID:6136672,InterPro:IPR001450,InterPro:IPR007202,InterPro:IPR010207,InterPro:IPR016463,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00037,PFAM:PF04060,PIR:PIRSF005784,TIGRFAM:TIGR01944,NCBI_GP:EGT80842.1;Name=EGT80842.1;Ontology_term=GO:0022900,GO:0005886,GO:0009055,GO:0051536;gbkey=CDS;gene=rnfB;go_component=plasma membrane|0005886||;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;go_process=electron transport chain|0022900||;locus_tag=GGE_1550;product=Electron transport complex protein rnfB;protein_id=EGT80842.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38091 38646 . + . ID=id-GGE_1550;Dbxref=InterPro:IPR010207,InterPro:IPR016463,PIR:PIRSF005784,TIGRFAM:TIGR01944;Note=rnfb: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfb~HAMAP:MF_00463~rnfb~electron transport complex%2C rnfb%2C subgroup~electron transport complex rnf%2C rnfb subunit~electron transport complex%2C rnfb%2C subgroup;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38091 38640 . + . ID=id-GGE_1550-2;Note=multi-dom%3B label: PRK05113;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38091 38628 . + . ID=id-GGE_1550-3;Note=HMMPanther:PTHR11938:SF65~electron transport complex protein rnfb~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38097 38160 . + . ID=id-GGE_1550-4;Note=transmembrane_regions;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38190 38505 . + . ID=id-GGE_1550-5;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38223 38472 . + . ID=id-GGE_1550-6;Note=Gene3D:3.30.70.20;gbkey=misc_feature;gene=rnfB;locus_tag=GGE_1550 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38127 38511 . - . ID=id-AFQR01000027.1:38127..38511;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38127 38421 . - . ID=id-AFQR01000027.1:38127..38421;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38157 38403 . - . ID=id-AFQR01000027.1:38157..38403;Dbxref=InterPro:IPR001450,PFAM:PF00037;Note=fer4~4fe-4s binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38181 38484 . - . ID=id-AFQR01000027.1:38181..38484;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38181 38394 . - . ID=id-AFQR01000027.1:38181..38394;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38193 38211 . - . ID=id-AFQR01000027.1:38193..38211;Dbxref=InterPro:IPR007202,PFAM:PF04060;Note=superfamily~fes~putative fe-s cluster%3B label: FeS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38283 38406 . - . ID=id-AFQR01000027.1:38283..38406;Note=superfamily%3B label: RNAP_RPB11_RPB3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 38673 41042 . + . ID=gene-GGE_1551;Name=GGE_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank CDS 38673 41042 . + 0 ID=cds-EGT80843.1;Parent=gene-GGE_1551;Dbxref=GeneID:145629223,InterPro:IPR009051,InterPro:IPR010208,InterPro:IPR011538,InterPro:IPR012285,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR019554,PFAM:PF01512,PFAM:PF10531,TIGRFAM:TIGR01945,NCBI_GP:EGT80843.1;Name=EGT80843.1;Note=ZP_01785022;Ontology_term=GO:0055114,GO:0016020,GO:0051539,GO:0010181,GO:0051287,GO:0009055,GO:0051536,GO:0016651,GO:0016491;gbkey=CDS;go_component=membrane|0016020||;go_function=4 iron 4 sulfur cluster binding|0051539||,FMN binding|0010181||,NAD or NADH binding|0051287||,electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity acting on NADH or NADPH|0016651||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1551;product=electron transport complex protein RnfC;protein_id=EGT80843.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38673 40905 . + . ID=id-GGE_1551;Dbxref=InterPro:IPR010208;Note=HAMAP:MF_00461~rnfc~electron transport complex%2C rnfc;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38712 39981 . + . ID=id-GGE_1551-2;Dbxref=InterPro:IPR010208,TIGRFAM:TIGR01945;Note=multi-dom~rnfc: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfc%3B label: rnfC;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38769 39996 . + . ID=id-GGE_1551-3;Note=HMMPanther:PTHR11780~family not named;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38955 39309 . + . ID=id-GGE_1551-4;Note=superfamily:SSF142019~nqo1 fmn-binding domain-like;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 39093 39111 . + . ID=id-GGE_1551-5;Dbxref=InterPro:IPR011538,PFAM:PF01512;Note=superfamily~complex1_51k~nadh ubiquinone oxidoreductase%2C 51kda subunit%3B label: Complex1_51K superfamily;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 40470 40479 . + . ID=id-GGE_1551-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 40614 40623 . + . ID=id-GGE_1551-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 40761 40770 . + . ID=id-GGE_1551-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 40905 40914 . + . ID=id-GGE_1551-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1551 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38709 40173 . - . ID=id-AFQR01000027.1:38709..40173;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38709 39924 . - . ID=id-AFQR01000027.1:38709..39924;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38709 39807 . - . ID=id-AFQR01000027.1:38709..39807;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38712 40287 . - . ID=id-AFQR01000027.1:38712..40287;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38733 40812 . - . ID=id-AFQR01000027.1:38733..40812;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38733 40665 . - . ID=id-AFQR01000027.1:38733..40665;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38733 40521 . - . ID=id-AFQR01000027.1:38733..40521;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38736 40371 . - . ID=id-AFQR01000027.1:38736..40371;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38739 40956 . - . ID=id-AFQR01000027.1:38739..40956;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38739 40293 . - . ID=id-AFQR01000027.1:38739..40293;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38745 40080 . - . ID=id-AFQR01000027.1:38745..40080;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38763 39897 . - . ID=id-AFQR01000027.1:38763..39897;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38766 39777 . - . ID=id-AFQR01000027.1:38766..39777;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38802 40014 . - . ID=id-AFQR01000027.1:38802..40014;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38817 39564 . - . ID=id-AFQR01000027.1:38817..39564;Dbxref=InterPro:IPR019554,PFAM:PF10531;Note=superfamily~slbb~soluble ligand binding domain%3B label: SLBB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38910 39774 . - . ID=id-AFQR01000027.1:38910..39774;Dbxref=InterPro:IPR012285;Note=Gene3D:1.10.1060.10~fumarate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 38922 39786 . - . ID=id-AFQR01000027.1:38922..39786;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 39012 39675 . - . ID=id-AFQR01000027.1:39012..39675;Dbxref=InterPro:IPR009051;Note=superfamily:SSF46548~alpha-helical ferredoxin~alpha-helical ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 41047 42123 . + . ID=gene-GGE_1552;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=GGE_1552 GCA_000222085.2|AFQR01000027.1 Genbank CDS 41047 42123 . + 0 ID=cds-EGT80844.1;Parent=gene-GGE_1552;Dbxref=GeneID:2495612,InterPro:IPR004338,InterPro:IPR011303,PFAM:PF03116,TIGRFAM:TIGR01946,NCBI_GP:EGT80844.1;Name=EGT80844.1;Ontology_term=GO:0022900,GO:0006810,GO:0016021,GO:0016020;gbkey=CDS;gene=rnfD;go_component=integral to membrane|0016021||,membrane|0016020||;go_process=electron transport chain|0022900||,transport|0006810||;locus_tag=GGE_1552;product=Electron transport complex protein rnfD;protein_id=EGT80844.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41047 42109 . + . ID=id-GGE_1552;Note=superfamily%3B label: NQR2_RnfD_RnfE superfamily;gbkey=misc_feature;gene=rnfD;locus_tag=GGE_1552 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41047 42106 . + . ID=id-GGE_1552-2;Dbxref=InterPro:IPR011303;Note=HAMAP:MF_00462~rnfd~electron transport complex%2C rnfd;gbkey=misc_feature;gene=rnfD;locus_tag=GGE_1552 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41053 42097 . + . ID=id-GGE_1552-3;Dbxref=InterPro:IPR004338,PFAM:PF03116;Note=nqr2_rnfd_rnfe~nadh-quinone reductase nqr2/rnfd;gbkey=misc_feature;gene=rnfD;locus_tag=GGE_1552 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41068 42085 . + . ID=id-GGE_1552-4;Dbxref=InterPro:IPR011303,TIGRFAM:TIGR01946;Note=rnfd: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfd;gbkey=misc_feature;gene=rnfD;locus_tag=GGE_1552 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41092 41812 . - . ID=id-AFQR01000027.1:41092..41812;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41101 41716 . - . ID=id-AFQR01000027.1:41101..41716;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41101 41110 . - . ID=id-AFQR01000027.1:41101..41110;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41107 41173 . - . ID=id-AFQR01000027.1:41107..41173;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41116 41929 . - . ID=id-AFQR01000027.1:41116..41929;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41116 41803 . - . ID=id-AFQR01000027.1:41116..41803;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41116 41416 . - . ID=id-AFQR01000027.1:41116..41416;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41116 41329 . - . ID=id-AFQR01000027.1:41116..41329;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 41116 41251 . - . ID=id-AFQR01000027.1:41116..41251;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 42123 42746 . + . ID=gene-GGE_1553;Name=rnfG;gbkey=Gene;gene=rnfG;gene_biotype=protein_coding;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank CDS 42123 42746 . + 0 ID=cds-EGT80845.1;Parent=gene-GGE_1553;Dbxref=GeneID:1176072,InterPro:IPR007329,InterPro:IPR010209,InterPro:IPR022989,PFAM:PF04205,TIGRFAM:TIGR01947,NCBI_GP:EGT80845.1;Name=EGT80845.1;Ontology_term=GO:0022900,GO:0016020,GO:0010181,GO:0009055;gbkey=CDS;gene=rnfG;go_component=membrane|0016020||;go_function=FMN binding|0010181||,electron carrier activity|0009055||;go_process=electron transport chain|0022900||;locus_tag=GGE_1553;product=Electron transport complex protein rnfG;protein_id=EGT80845.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42132 42717 . + . ID=id-GGE_1553;Dbxref=InterPro:IPR022989;Note=HAMAP:MF_00479~rfng~electron transport complex%2C rnfg%2C proteobacteria;gbkey=misc_feature;gene=rnfG;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42144 42717 . + . ID=id-GGE_1553-2;Note=superfamily%3B label: FMN_bind superfamily;gbkey=misc_feature;gene=rnfG;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42153 42192 . + . ID=id-GGE_1553-3;Note=transmembrane_regions;gbkey=misc_feature;gene=rnfG;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42156 42675 . + . ID=id-GGE_1553-4;Dbxref=InterPro:IPR010209,TIGRFAM:TIGR01947;Note=rnfg: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfg;gbkey=misc_feature;gene=rnfG;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42309 42318 . + . ID=id-GGE_1553-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rnfG;locus_tag=GGE_1553 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42381 42423 . - . ID=id-AFQR01000027.1:42381..42423;Dbxref=InterPro:IPR007329,PFAM:PF04205;Note=fmn_bind~fmn-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 42748 43446 . + . ID=gene-GGE_1554;Name=rnfE;gbkey=Gene;gene=rnfE;gene_biotype=protein_coding;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank CDS 42748 43446 . + 0 ID=cds-EGT80846.1;Parent=gene-GGE_1554;Dbxref=GeneID:2495614,InterPro:IPR003667,InterPro:IPR010968,PFAM:PF02508,PIR:PIRSF006102,TIGRFAM:TIGR01948,NCBI_GP:EGT80846.1;Name=EGT80846.1;Ontology_term=GO:0022900,GO:0016020,GO:0019866;gbkey=CDS;gene=rnfE;go_component=membrane|0016020||,organelle inner membrane|0019866||;go_process=electron transport chain|0022900||;locus_tag=GGE_1554;product=Electron transport complex protein rnfE;protein_id=EGT80846.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42796 42805 . + . ID=id-GGE_1554;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42814 43381 . + . ID=id-GGE_1554-2;Dbxref=InterPro:IPR010968;Note=HAMAP:MF_00478~rnfe~electron transport complex%2C rnfe;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42817 43378 . + . ID=id-GGE_1554-3;Dbxref=InterPro:IPR003667,PIR:PIRSF006102;Note=na(+)-translocating nadh-quinone reductase%2C subunits d/e~electron transport complex%2C rnf/nqr;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42826 43369 . + . ID=id-GGE_1554-4;Note=superfamily%3B label: Rnf-Nqr superfamily;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42832 43339 . + . ID=id-GGE_1554-5;Dbxref=InterPro:IPR003667,PFAM:PF02508;Note=rnf-nqr~electron transport complex%2C rnf/nqr;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42835 43360 . + . ID=id-GGE_1554-6;Dbxref=InterPro:IPR010968,TIGRFAM:TIGR01948;Note=rnfe: electron transport complex%2C rnfabcdge~electron transport complex%2C rnfe;gbkey=misc_feature;gene=rnfE;locus_tag=GGE_1554 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42796 43381 . - . ID=id-AFQR01000027.1:42796..43381;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42808 43369 . - . ID=id-AFQR01000027.1:42808..43369;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42808 43021 . - . ID=id-AFQR01000027.1:42808..43021;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42817 43195 . - . ID=id-AFQR01000027.1:42817..43195;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42817 43090 . - . ID=id-AFQR01000027.1:42817..43090;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 42817 42934 . - . ID=id-AFQR01000027.1:42817..42934;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 43448 44083 . + . ID=gene-GGE_1555;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank CDS 43448 44083 . + 0 ID=cds-EGT80847.1;Parent=gene-GGE_1555;Dbxref=GeneID:1169526,InterPro:IPR000445,InterPro:IPR003265,InterPro:IPR003651,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005759,InterPro:IPR011257,InterPro:IPR023170,PFAM:PF00633,PFAM:PF00730,PFAM:PF10576,TIGRFAM:TIGR01083,NCBI_GP:EGT80847.1;Name=EGT80847.1;Ontology_term=GO:0006281,GO:0006284,GO:0005622,GO:0051539,GO:0003677,GO:0003906,GO:0003824,GO:0004519;gbkey=CDS;gene=nth;go_component=intracellular|0005622||;go_function=4 iron 4 sulfur cluster binding|0051539||,DNA binding|0003677||,DNA-(apurinic or apyrimidinic site) lyase activity|0003906||,catalytic activity|0003824||,endonuclease activity|0004519||;go_process=DNA repair|0006281||,base-excision repair|0006284||;locus_tag=GGE_1555;product=Endonuclease III;protein_id=EGT80847.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43448 44081 . + . ID=id-GGE_1555;Dbxref=InterPro:IPR011257;Note=superfamily:SSF48150~dna-glycosylase~dna glycosylase;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43448 44075 . + . ID=id-GGE_1555-2;Note=multi-dom%3B label: PRK10702;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43457 44024 . + . ID=id-GGE_1555-3;Dbxref=InterPro:IPR005759,TIGRFAM:TIGR01083;Note=nth: endonuclease iii~endonuclease iii/nth;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43484 44030 . + . ID=id-GGE_1555-4;Note=HMMPanther:PTHR10359~a/g-specific adenine glycosylase/endonuclease iii;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43514 43751 . + . ID=id-GGE_1555-5;Dbxref=InterPro:IPR011257;Note=Gene3D:1.10.340.30~dna glycosylase;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43538 43910 . + . ID=id-GGE_1555-6;Note=specific~superfamily%3B label: ENDO3c;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43550 43850 . + . ID=id-GGE_1555-7;Dbxref=InterPro:IPR003265,PFAM:PF00730;Note=hhh-gpd~hhh-gpd domain;gbkey=misc_feature;gene=nth;locus_tag=GGE_1555 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43484 43916 . - . ID=id-AFQR01000027.1:43484..43916;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43499 44009 . - . ID=id-AFQR01000027.1:43499..44009;Dbxref=InterPro:IPR003651,InterPro:IPR004035,PFAM:PF10576;Note=PatternScan:PS00764~endonuclease_iii_1~endonuclease iii%2C iron-sulphur binding site~endiii_4fe-2s~endonuclease iii-like%2C iron-sulphur cluster loop motif;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43511 44006 . - . ID=id-AFQR01000027.1:43511..44006;Note=superfamily%3B label: FES superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43532 43748 . - . ID=id-AFQR01000027.1:43532..43748;Dbxref=InterPro:IPR000445,PFAM:PF00633;Note=hhh~helix-hairpin-helix motif;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43538 43754 . - . ID=id-AFQR01000027.1:43538..43754;Dbxref=InterPro:IPR004036;Note=PatternScan:PS01155~endonuclease_iii_2~endonuclease iii%2C conserved site-2;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 43706 43817 . - . ID=id-AFQR01000027.1:43706..43817;Dbxref=InterPro:IPR023170;Note=Gene3D:1.10.1670.10~helix-turn-helix%2C base-excision dna repair;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44111 44120 . - . ID=id-AFQR01000027.1:44111..44120;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 44142 45515 . + . ID=gene-GGE_1556;Name=GGE_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank CDS 44142 45515 . + 0 ID=cds-EGT80848.1;Parent=gene-GGE_1556;Dbxref=GeneID:1176075,InterPro:IPR000175,PFAM:PF00209,NCBI_GP:EGT80848.1;Name=EGT80848.1;Note=HI_1690;Ontology_term=GO:0006836,GO:0005887,GO:0016020,GO:0005328;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=neurotransmitter:sodium symporter activity|0005328||;go_process=neurotransmitter transport|0006836||;locus_tag=GGE_1556;product=putative sodium:neurotransmitter symporter;protein_id=EGT80848.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44154 45492 . + . ID=id-GGE_1556;Dbxref=InterPro:IPR000175;Note=HMMPanther:PTHR11616:SF11~sodium-dependent neurotransmitter transporter~HMMPanther:PTHR11616~family not named~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44160 45444 . + . ID=id-GGE_1556-2;Note=superfamily%3B label: SNF superfamily;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44163 45495 . + . ID=id-GGE_1556-3;Dbxref=InterPro:IPR000175;Note=ProfileScan:PS50267~na_neurotran_symp_3~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44166 44517 . + . ID=id-GGE_1556-4;Dbxref=InterPro:IPR000175,PFAM:PF00209;Note=snf~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44181 44202 . + . ID=id-GGE_1556-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44190 44208 . + . ID=id-GGE_1556-6;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44634 45021 . + . ID=id-GGE_1556-7;Dbxref=InterPro:IPR000175,PFAM:PF00209;Note=snf~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_1556 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44184 45462 . - . ID=id-AFQR01000027.1:44184..45462;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44187 44238 . - . ID=id-AFQR01000027.1:44187..44238;Dbxref=InterPro:IPR000175;Note=PatternScan:PS00610~na_neurotran_symp_1~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44196 45450 . - . ID=id-AFQR01000027.1:44196..45450;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44202 45207 . - . ID=id-AFQR01000027.1:44202..45207;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44202 44703 . - . ID=id-AFQR01000027.1:44202..44703;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44202 44277 . - . ID=id-AFQR01000027.1:44202..44277;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44205 44937 . - . ID=id-AFQR01000027.1:44205..44937;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 45324 . - . ID=id-AFQR01000027.1:44211..45324;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 45060 . - . ID=id-AFQR01000027.1:44211..45060;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 44949 . - . ID=id-AFQR01000027.1:44211..44949;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 44820 . - . ID=id-AFQR01000027.1:44211..44820;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 44616 . - . ID=id-AFQR01000027.1:44211..44616;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 44451 . - . ID=id-AFQR01000027.1:44211..44451;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44211 44268 . - . ID=id-AFQR01000027.1:44211..44268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 44214 45081 . - . ID=id-AFQR01000027.1:44214..45081;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 45565 46542 . - . ID=gene-GGE_1557;Name=GGE_1557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank CDS 45565 46542 . - 0 ID=cds-EGT80849.1;Parent=gene-GGE_1557;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,PFAM:PF00512,PFAM:PF00672,PFAM:PF02518,NCBI_GP:EGT80849.1;Name=EGT80849.1;Note=Hypothetical aTPase-like%2C ATP-binding domain;Ontology_term=GO:0018106,GO:0016310,GO:0007165,GO:0016021,GO:0016020,GO:0005524,GO:0004673,GO:0004871,GO:0016772,GO:0000155;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,protein histidine kinase activity|0004673||,signal transducer activity|0004871||,transferase activity transferring phosphorus-containing groups|0016772||,two-component sensor activity|0000155||;go_process=peptidyl-histidine phosphorylation|0018106||,phosphorylation|0016310||,signal transduction|0007165||;locus_tag=GGE_1557;product=putative aTPase-like%2C ATP-binding domain-containing protein;protein_id=EGT80849.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45565 46522 . - . ID=id-GGE_1557;Note=HMMPanther:PTHR24423:SF23~subfamily not named~HMMPanther:PTHR24423~family not named;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45607 46477 . - . ID=id-GGE_1557-2;Note=multi-dom%3B label: BaeS;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45623 45632 . - . ID=id-GGE_1557-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45676 45760 . - . ID=id-GGE_1557-4;Note=superfamily%3B label: HAMP superfamily;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45679 45760 . - . ID=id-GGE_1557-5;Dbxref=InterPro:IPR003660,PFAM:PF00672;Note=hamp~hamp linker domain;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45910 46198 . - . ID=id-GGE_1557-6;Dbxref=InterPro:IPR005467;Note=ProfileScan:PS50109~his_kin~signal transduction histidine kinase%2C core;gbkey=misc_feature;locus_tag=GGE_1557 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45610 46324 . + . ID=id-AFQR01000027.1:45610..46324;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45622 46420 . + . ID=id-AFQR01000027.1:45622..46420;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45634 45661 . + . ID=id-AFQR01000027.1:45634..45661;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45724 45730 . + . ID=id-AFQR01000027.1:45724..45730;Dbxref=InterPro:IPR003660;Note=ProfileScan:PS50885~hamp~hamp linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45748 45868 . + . ID=id-AFQR01000027.1:45748..45868;Note=Gene3D:1.10.287.240;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45757 45895 . + . ID=id-AFQR01000027.1:45757..45895;Dbxref=InterPro:IPR003661,PFAM:PF00512;Note=hiska~signal transduction histidine kinase%2C subgroup 1%2C dimerization/phosphoacceptor domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45760 45883 . + . ID=id-AFQR01000027.1:45760..45883;Note=specific~superfamily%3B label: HisKA;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45817 45835 . + . ID=id-AFQR01000027.1:45817..45835;Dbxref=InterPro:IPR009082;Note=superfamily:SSF47384~homodimeric domain of signal transducing histidine kinase~signal transduction histidine kinase%2C homodimeric;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45835 46249 . + . ID=id-AFQR01000027.1:45835..46249;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 45847 46237 . + . ID=id-AFQR01000027.1:45847..46237;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46003 46099 . + . ID=id-AFQR01000027.1:46003..46099;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46033 46051 . + . ID=id-AFQR01000027.1:46033..46051;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46637 46796 . - . ID=id-AFQR01000027.1:46637..46796;Note=multi-dom%3B label: PRK10337;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46646 46694 . - . ID=id-AFQR01000027.1:46646..46694;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46860 46869 . + . ID=id-AFQR01000027.1:46860..46869;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 46919 47581 . - . ID=gene-GGE_1558;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank CDS 46919 47581 . - 0 ID=cds-EGT80850.1;Parent=gene-GGE_1558;Dbxref=GeneID:1176110,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,PFAM:PF00072,PFAM:PF00486,NCBI_GP:EGT80850.1;Name=EGT80850.1;Ontology_term=GO:0006355,GO:0000160,GO:0003677,GO:0000156;gbkey=CDS;gene=qseB;go_function=DNA binding|0003677||,two-component response regulator activity|0000156||;go_process=regulation of transcription DNA-dependent|0006355||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_1558;product=Transcriptional regulatory protein qseB;protein_id=EGT80850.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46919 47570 . - . ID=id-GGE_1558;Note=multi-dom%3B label: PRK10336;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46919 47567 . - . ID=id-GGE_1558-2;Note=HMMPanther:PTHR26402:SF159~transcriptional regulatory protein qseb~HMMPanther:PTHR26402~family not named;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46919 47432 . - . ID=id-GGE_1558-3;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46919 47285 . - . ID=id-GGE_1558-4;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46925 47264 . - . ID=id-GGE_1558-5;Dbxref=InterPro:IPR001789;Note=ProfileScan:PS50110~response_regulatory~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46928 47249 . - . ID=id-GGE_1558-6;Dbxref=InterPro:IPR001789,PFAM:PF00072;Note=response_reg~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 46931 47258 . - . ID=id-GGE_1558-7;Note=specific~superfamily%3B label: REC;gbkey=misc_feature;gene=qseB;locus_tag=GGE_1558 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47135 47354 . + . ID=id-AFQR01000027.1:47135..47354;Dbxref=InterPro:IPR001867,PFAM:PF00486;Note=trans_reg_c~signal transduction response regulator;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47189 47300 . + . ID=id-AFQR01000027.1:47189..47300;Note=specific~superfamily%3B label: trans_reg_C;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47201 47288 . + . ID=id-AFQR01000027.1:47201..47288;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47589 47598 . - . ID=id-AFQR01000027.1:47589..47598;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 47644 48009 . - . ID=gene-GGE_1559;Name=GGE_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1559 GCA_000222085.2|AFQR01000027.1 Genbank CDS 47644 48009 . - 0 ID=cds-EGT80851.1;Parent=gene-GGE_1559;Dbxref=GeneID:1176141,InterPro:IPR005220,InterPro:IPR016052,PFAM:PF04076,TIGRFAM:TIGR00156,NCBI_GP:EGT80851.1;Name=EGT80851.1;Note=HI_1709;gbkey=CDS;locus_tag=GGE_1559;product=Hypothetical protein;protein_id=EGT80851.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47644 48007 . - . ID=id-GGE_1559;Dbxref=InterPro:IPR016052,TIGRFAM:TIGR00156;Note=tigr00156: conserved hypothetical protein t~conserved hypothetical protein chp00156;gbkey=misc_feature;locus_tag=GGE_1559 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47644 48001 . - . ID=id-GGE_1559-2;Dbxref=InterPro:IPR005220,PFAM:PF04076;Note=superfamily~bof~protein of unknown function duf388%2C ob-fold%3B label: BOF superfamily;gbkey=misc_feature;locus_tag=GGE_1559 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47686 47965 . - . ID=id-GGE_1559-3;Dbxref=InterPro:IPR005220;Note=superfamily:SSF101756~hypothetical protein ygiw~protein of unknown function duf388%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1559 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47710 47941 . - . ID=id-GGE_1559-4;Dbxref=InterPro:IPR005220;Note=Gene3D:2.40.50.200~protein of unknown function duf388%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1559 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 47695 47695 . + . ID=id-AFQR01000027.1:47695..47695;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 48140 49027 . - . ID=gene-GGE_1560;Name=GGE_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1560 GCA_000222085.2|AFQR01000027.1 Genbank CDS 48140 49027 . - 0 ID=cds-EGT80852.1;Parent=gene-GGE_1560;Dbxref=GeneID:260913954,InterPro:IPR006314,InterPro:IPR011008,PFAM:PF04261,TIGRFAM:TIGR01413,NCBI_GP:EGT80852.1;Name=EGT80852.1;Note=ZP_05920428;gbkey=CDS;locus_tag=GGE_1560;product=dyp-type peroxidase;protein_id=EGT80852.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 48140 49025 . - . ID=id-GGE_1560;Dbxref=InterPro:IPR006314;Note=ProfileScan:PS51404~dyp_peroxidase~dyp-type peroxidase;gbkey=misc_feature;locus_tag=GGE_1560 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 48146 49022 . - . ID=id-GGE_1560-2;Dbxref=InterPro:IPR011008;Note=superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel;gbkey=misc_feature;locus_tag=GGE_1560 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 48152 49007 . - . ID=id-GGE_1560-3;Dbxref=InterPro:IPR006314,TIGRFAM:TIGR01413;Note=superfamily~dyp_perox_fam: dyp-type peroxidase fami~dyp-type peroxidase%3B label: Dyp_perox superfamily;gbkey=misc_feature;locus_tag=GGE_1560 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 48152 49004 . - . ID=id-GGE_1560-4;Dbxref=InterPro:IPR006314,PFAM:PF04261;Note=dyp_perox~dyp-type peroxidase;gbkey=misc_feature;locus_tag=GGE_1560 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 48185 48455 . + . ID=id-AFQR01000027.1:48185..48455;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 49138 51117 . + . ID=gene-GGE_1561;Name=GGE_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1561 GCA_000222085.2|AFQR01000027.1 Genbank CDS 49138 51117 . + 0 ID=cds-EGT80853.1;Parent=gene-GGE_1561;Dbxref=GeneID:325578508,InterPro:IPR004923,PFAM:PF03239,NCBI_GP:EGT80853.1;Name=EGT80853.1;Note=ZP_08148608;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=transmembrane transport|0055085||;locus_tag=GGE_1561;product=iron permease FTR1;protein_id=EGT80853.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49996 50188 . + . ID=id-GGE_1561;Note=superfamily%3B label: FTR1 superfamily;gbkey=misc_feature;locus_tag=GGE_1561 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 50761 50770 . + . ID=id-GGE_1561-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1561 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49168 50374 . - . ID=id-AFQR01000027.1:49168..50374;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49171 49960 . - . ID=id-AFQR01000027.1:49171..49960;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49174 51046 . - . ID=id-AFQR01000027.1:49174..51046;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49174 49711 . - . ID=id-AFQR01000027.1:49174..49711;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49192 51031 . - . ID=id-AFQR01000027.1:49192..51031;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49192 50878 . - . ID=id-AFQR01000027.1:49192..50878;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49192 50455 . - . ID=id-AFQR01000027.1:49192..50455;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49207 50773 . - . ID=id-AFQR01000027.1:49207..50773;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49207 50641 . - . ID=id-AFQR01000027.1:49207..50641;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49207 50536 . - . ID=id-AFQR01000027.1:49207..50536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49207 50350 . - . ID=id-AFQR01000027.1:49207..50350;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 49951 49978 . - . ID=id-AFQR01000027.1:49951..49978;Dbxref=InterPro:IPR004923,PFAM:PF03239;Note=ftr1~iron permease ftr1;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 51145 51666 . + . ID=gene-GGE_1562;Name=GGE_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1562 GCA_000222085.2|AFQR01000027.1 Genbank CDS 51145 51666 . + 0 ID=cds-EGT80854.1;Parent=gene-GGE_1562;Dbxref=GeneID:325578509,InterPro:IPR018470,PFAM:PF10634,NCBI_GP:EGT80854.1;Name=EGT80854.1;Note=ZP_08148609;gbkey=CDS;locus_tag=GGE_1562;product=periplasmic protein;protein_id=EGT80854.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51157 51172 . + . ID=id-GGE_1562;Note=seg;gbkey=misc_feature;locus_tag=GGE_1562 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51211 51595 . + . ID=id-GGE_1562-2;Dbxref=InterPro:IPR018470,PFAM:PF10634;Note=iron_transport~ferrous iron transport protein%2C bacterial;gbkey=misc_feature;locus_tag=GGE_1562 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51214 51592 . + . ID=id-GGE_1562-3;Note=superfamily%3B label: Iron_transport superfamily;gbkey=misc_feature;locus_tag=GGE_1562 GCA_000222085.2|AFQR01000027.1 Genbank gene 51761 53176 . + . ID=gene-GGE_1563;Name=GGE_1563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1563 GCA_000222085.2|AFQR01000027.1 Genbank CDS 51761 53176 . + 0 ID=cds-EGT80855.1;Parent=gene-GGE_1563;Dbxref=GeneID:325578510,InterPro:IPR007029,InterPro:IPR018758,PFAM:PF04945,PFAM:PF10080,NCBI_GP:EGT80855.1;Name=EGT80855.1;Note=ZP_08148610;gbkey=CDS;locus_tag=GGE_1563;product=integral membrane protein;protein_id=EGT80855.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51761 53000 . + . ID=id-GGE_1563;Note=multi-dom%3B label: COG4393;gbkey=misc_feature;locus_tag=GGE_1563 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51770 51830 . + . ID=id-GGE_1563-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1563 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 52330 52339 . + . ID=id-GGE_1563-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1563 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51785 52838 . - . ID=id-AFQR01000027.1:51785..52838;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51815 52532 . - . ID=id-AFQR01000027.1:51815..52532;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51818 51935 . - . ID=id-AFQR01000027.1:51818..51935;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51818 51866 . - . ID=id-AFQR01000027.1:51818..51866;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51821 51941 . - . ID=id-AFQR01000027.1:51821..51941;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51827 52433 . - . ID=id-AFQR01000027.1:51827..52433;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51830 52370 . - . ID=id-AFQR01000027.1:51830..52370;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51830 52232 . - . ID=id-AFQR01000027.1:51830..52232;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51830 52127 . - . ID=id-AFQR01000027.1:51830..52127;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51839 52229 . - . ID=id-AFQR01000027.1:51839..52229;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51890 53018 . - . ID=id-AFQR01000027.1:51890..53018;Dbxref=InterPro:IPR007029,PFAM:PF04945;Note=yhs~yhs;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 51920 53003 . - . ID=id-AFQR01000027.1:51920..53003;Note=superfamily%3B label: Ribosomal_L24e_L24 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 52073 52676 . - . ID=id-AFQR01000027.1:52073..52676;Dbxref=InterPro:IPR018758,PFAM:PF10080;Note=superfamily~duf2318~domain of unknown function duf2318%2C membrane%3B label: DUF2318 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 52225 52234 . - . ID=id-AFQR01000027.1:52225..52234;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 53179 54519 . + . ID=gene-GGE_1564;Name=GGE_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1564 GCA_000222085.2|AFQR01000027.1 Genbank CDS 53179 54519 . + 0 ID=cds-EGT80856.1;Parent=gene-GGE_1564;Dbxref=GeneID:325578511,InterPro:IPR003838,PFAM:PF02687,NCBI_GP:EGT80856.1;Name=EGT80856.1;Note=ZP_08148611;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1564;product=lipoprotein release ABC superfamily ATP binding cassette transporter%2C permease;protein_id=EGT80856.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53227 54469 . + . ID=id-GGE_1564;Note=multi-dom%3B label: SalY;gbkey=misc_feature;locus_tag=GGE_1564 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53239 53248 . + . ID=id-GGE_1564-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1564 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53803 53812 . + . ID=id-GGE_1564-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1564 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53248 54397 . - . ID=id-AFQR01000027.1:53248..54397;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53248 54151 . - . ID=id-AFQR01000027.1:53248..54151;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53254 54280 . - . ID=id-AFQR01000027.1:53254..54280;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53535 53544 . - . ID=id-AFQR01000027.1:53535..53544;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53566 54109 . - . ID=id-AFQR01000027.1:53566..54109;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 53587 54088 . - . ID=id-AFQR01000027.1:53587..54088;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 54506 55660 . + . ID=gene-GGE_1565;Name=GGE_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1565 GCA_000222085.2|AFQR01000027.1 Genbank CDS 54506 55660 . + 0 ID=cds-EGT80857.1;Parent=gene-GGE_1565;Dbxref=GeneID:301156372,InterPro:IPR003838,PFAM:PF02687,NCBI_GP:EGT80857.1;Name=EGT80857.1;Note=CBW15843;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1565;product=Hypothetical protein;protein_id=EGT80857.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54539 55628 . + . ID=id-GGE_1565;Note=multi-dom%3B label: LolE;gbkey=misc_feature;locus_tag=GGE_1565 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54563 55442 . - . ID=id-AFQR01000027.1:54563..55442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54566 55553 . - . ID=id-AFQR01000027.1:54566..55553;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54575 55442 . - . ID=id-AFQR01000027.1:54575..55442;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54575 55295 . - . ID=id-AFQR01000027.1:54575..55295;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54575 54590 . - . ID=id-AFQR01000027.1:54575..54590;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 54980 55166 . - . ID=id-AFQR01000027.1:54980..55166;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55010 55133 . - . ID=id-AFQR01000027.1:55010..55133;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 55702 56376 . + . ID=gene-GGE_1566;Name=GGE_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank CDS 55702 56376 . + 0 ID=cds-EGT80858.1;Parent=gene-GGE_1566;Dbxref=GeneID:301156373,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT80858.1;Name=EGT80858.1;Note=CBW15844;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_1566;product=Putative transporter subunit: ATP-binding component of ABC superfamily;protein_id=EGT80858.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55711 56362 . + . ID=id-GGE_1566;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55711 56350 . + . ID=id-GGE_1566-2;Note=HMMPanther:PTHR24220:SF165~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55717 56353 . + . ID=id-GGE_1566-3;Note=multi-dom%3B label: SalX;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55720 56359 . + . ID=id-GGE_1566-4;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55720 56332 . + . ID=id-GGE_1566-5;Note=specific~superfamily%3B label: ABC_MJ0796_Lo1CDE_FtsE;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55732 56323 . + . ID=id-GGE_1566-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55837 56068 . + . ID=id-GGE_1566-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1566 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 55747 56119 . - . ID=id-AFQR01000027.1:55747..56119;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000027.1 Genbank gene 56363 56845 . + . ID=gene-GGE_1567;Name=GGE_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank CDS 56363 56845 . + 0 ID=cds-EGT80859.1;Parent=gene-GGE_1567;Dbxref=GeneID:167859080,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,PFAM:PF00578,NCBI_GP:EGT80859.1;Name=EGT80859.1;Note=ACA04475;Ontology_term=GO:0045454,GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||,oxidoreductase activity|0016491||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_1567;product=putative thioredoxin;protein_id=EGT80859.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56363 56429 . + . ID=id-GGE_1567;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56381 56825 . + . ID=id-GGE_1567-2;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin_fold~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56444 56765 . + . ID=id-GGE_1567-3;Dbxref=InterPro:IPR012336,InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like~superfamily:SSF52833~thiordxn-like_fd~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56450 56708 . + . ID=id-GGE_1567-4;Dbxref=InterPro:IPR000866,PFAM:PF00578;Note=ahpc-tsa~alkyl hydroperoxide reductase subunit c/ thiol specific antioxidant;gbkey=misc_feature;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56468 56702 . + . ID=id-GGE_1567-5;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_1567 GCA_000222085.2|AFQR01000027.1 Genbank gene 56849 57166 . + . ID=gene-GGE_1568;Name=GGE_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank CDS 56849 57166 . + 0 ID=cds-EGT80860.1;Parent=gene-GGE_1568;Dbxref=GeneID:167859081,InterPro:IPR003088,InterPro:IPR009056,PFAM:PF00034,NCBI_GP:EGT80860.1;Name=EGT80860.1;Note=ACA04476;Ontology_term=GO:0009055,GO:0020037,GO:0005506;gbkey=CDS;go_function=electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||;locus_tag=GGE_1568;product=putative cytochrome c;protein_id=EGT80860.1;transl_table=11 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56849 57164 . + . ID=id-GGE_1568;Dbxref=InterPro:IPR009056;Note=superfamily:SSF46626~cytochrome c~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56870 56891 . + . ID=id-GGE_1568-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56918 57098 . + . ID=id-GGE_1568-3;Note=superfamily%3B label: Cytochrom_C superfamily;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56924 57089 . + . ID=id-GGE_1568-4;Dbxref=InterPro:IPR009056;Note=ProfileScan:PS51007~cytc~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56933 57068 . + . ID=id-GGE_1568-5;Dbxref=InterPro:IPR003088,PFAM:PF00034;Note=cytochrom_c~cytochrome c%2C class i;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 56948 57053 . + . ID=id-GGE_1568-6;Dbxref=InterPro:IPR009056;Note=Gene3D:1.10.760.10~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_1568 GCA_000222085.2|AFQR01000027.1 Genbank sequence_feature 57046 57055 . - . ID=id-AFQR01000027.1:57046..57055;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000026.1 1 1854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000026.1 Genbank region 1 1854 . + . ID=AFQR01000026.1:1..1854;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000026.1 Genbank sequence_feature 9 18 . - . ID=id-AFQR01000026.1:9..18;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000026.1 Genbank gene 407 628 . + . ID=gene-GGE_1516;Name=GGE_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1516 GCA_000222085.2|AFQR01000026.1 Genbank CDS 407 628 . + 0 ID=cds-EGT80899.1;Parent=gene-GGE_1516;Dbxref=GeneID:319776167,NCBI_GP:EGT80899.1;Name=EGT80899.1;Note=YP_004138655~HICON_15180;gbkey=CDS;locus_tag=GGE_1516;product=Hypothetical protein;protein_id=EGT80899.1;transl_table=11 GCA_000222085.2|AFQR01000026.1 Genbank gene 615 1274 . + . ID=gene-GGE_1517;Name=GGE_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1517 GCA_000222085.2|AFQR01000026.1 Genbank CDS 615 1274 . + 0 ID=cds-EGT80900.1;Parent=gene-GGE_1517;Dbxref=GeneID:145641959,NCBI_GP:EGT80900.1;Name=EGT80900.1;Note=ZP_01797532~CGSHiR3021_02698;gbkey=CDS;locus_tag=GGE_1517;product=Hypothetical protein;protein_id=EGT80900.1;transl_table=11 GCA_000222085.2|AFQR01000026.1 Genbank gene 1267 1659 . + . ID=gene-GGE_1518;Name=GGE_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1518 GCA_000222085.2|AFQR01000026.1 Genbank CDS 1267 1659 . + 0 ID=cds-EGT80901.1;Parent=gene-GGE_1518;Dbxref=GeneID:145641960,NCBI_GP:EGT80901.1;Name=EGT80901.1;Note=ZP_01797533~CGSHiR3021_02703;gbkey=CDS;locus_tag=GGE_1518;product=Hypothetical protein;protein_id=EGT80901.1;transl_table=11 GCA_000222085.2|AFQR01000026.1 Genbank sequence_feature 1767 1776 . + . ID=id-AFQR01000026.1:1767..1776;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000025.1 1 818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000025.1 Genbank region 1 818 . + . ID=AFQR01000025.1:1..818;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 ##sequence-region AFQR01000024.1 1 14467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000024.1 Genbank region 1 14467 . + . ID=AFQR01000024.1:1..14467;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000024.1 Genbank gene 252 716 . - . ID=gene-GGE_1500;Name=GGE_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1500 GCA_000222085.2|AFQR01000024.1 Genbank CDS 252 716 . - 0 ID=cds-EGT80946.1;Parent=gene-GGE_1500;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT80946.1;Name=EGT80946.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1500;product=transposase like protein;protein_id=EGT80946.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 267 645 . - . ID=id-GGE_1500;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1500 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 270 645 . - . ID=id-GGE_1500-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1500 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 297 609 . - . ID=id-GGE_1500-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1500 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 300 606 . - . ID=id-GGE_1500-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1500 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 864 873 . - . ID=id-AFQR01000024.1:864..873;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 874 883 . + . ID=id-AFQR01000024.1:874..883;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 900 2087 . - . ID=gene-GGE_1501;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank CDS 900 2087 . - 0 ID=cds-EGT80947.1;Parent=gene-GGE_1501;Dbxref=GeneID:81335774,InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002307,InterPro:IPR002942,InterPro:IPR014729,PFAM:PF00579,PFAM:PF01479,TIGRFAM:TIGR00234,NCBI_GP:EGT80947.1;Name=EGT80947.1;Ontology_term=GO:0006418,GO:0006412,GO:0006437,GO:0005737,GO:0005524,GO:0003723,GO:0004812,GO:0000166,GO:0004831;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,RNA binding|0003723||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,tyrosine-tRNA ligase activity|0004831||;go_process=tRNA aminoacylation for protein translation|0006418||,translation|0006412||,tyrosyl-tRNA aminoacylation|0006437||;locus_tag=GGE_1501;product=Tyrosyl-tRNA synthetase;protein_id=EGT80947.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 900 2085 . - . ID=id-GGE_1501;Dbxref=InterPro:IPR002307,TIGRFAM:TIGR00234;Note=tyrs: tyrosyl-trna synthetase~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 906 2079 . - . ID=id-GGE_1501-2;Dbxref=InterPro:IPR002307;Note=HAMAP:MF_02007~tyr_trna_synth_type2~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 909 2076 . - . ID=id-GGE_1501-3;Note=multi-dom%3B label: PRK05912;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 909 1842 . - . ID=id-GGE_1501-4;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 915 2070 . - . ID=id-GGE_1501-5;Dbxref=InterPro:IPR002307;Note=HMMPanther:PTHR11766~family not named~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 933 1551 . - . ID=id-GGE_1501-6;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 987 1767 . - . ID=id-GGE_1501-7;Dbxref=InterPro:IPR002305,PFAM:PF00579;Note=trna-synt_1b~aminoacyl-trna synthetase%2C class ib;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1002 1689 . - . ID=id-GGE_1501-8;Note=specific~superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=tyrS;locus_tag=GGE_1501 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 933 1026 . + . ID=id-AFQR01000024.1:933..1026;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 939 1533 . + . ID=id-AFQR01000024.1:939..1533;Dbxref=InterPro:IPR002307;Note=FPrintScan:PR01040~trnasynthtyr~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 948 1791 . + . ID=id-AFQR01000024.1:948..1791;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 948 1383 . + . ID=id-AFQR01000024.1:948..1383;Dbxref=InterPro:IPR002307;Note=FPrintScan:PR01040~trnasynthtyr~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 969 1434 . + . ID=id-AFQR01000024.1:969..1434;Dbxref=InterPro:IPR002307;Note=FPrintScan:PR01040~trnasynthtyr~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 969 1038 . + . ID=id-AFQR01000024.1:969..1038;Dbxref=InterPro:IPR002307;Note=FPrintScan:PR01040~trnasynthtyr~tyrosyl-trna synthetase%2C class ib;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1023 1902 . + . ID=id-AFQR01000024.1:1023..1902;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1068 1902 . + . ID=id-AFQR01000024.1:1068..1902;Note=superfamily%3B label: S4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1083 1902 . + . ID=id-AFQR01000024.1:1083..1902;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1101 1881 . + . ID=id-AFQR01000024.1:1101..1881;Note=Gene3D:3.10.290.10;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1197 1791 . + . ID=id-AFQR01000024.1:1197..1791;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 1197 1584 . + . ID=id-AFQR01000024.1:1197..1584;Note=Gene3D:1.10.240.10;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 2288 3004 . - . ID=gene-GGE_1502;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=GGE_1502 GCA_000222085.2|AFQR01000024.1 Genbank CDS 2288 3004 . - 0 ID=cds-EGT80948.1;Parent=gene-GGE_1502;Dbxref=GeneID:166219746,InterPro:IPR005224,PFAM:PF03749,TIGRFAM:TIGR00230,NCBI_GP:EGT80948.1;Name=EGT80948.1;gbkey=CDS;gene=sfsA;locus_tag=GGE_1502;product=Sugar fermentation stimulation protein;protein_id=EGT80948.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 2288 3002 . - . ID=id-GGE_1502;Dbxref=InterPro:IPR005224;Note=HAMAP:MF_00095~sfsa~sugar fermentation stimulation protein;gbkey=misc_feature;gene=sfsA;locus_tag=GGE_1502 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 2288 2993 . - . ID=id-GGE_1502-2;Note=superfamily%3B label: SfsA superfamily;gbkey=misc_feature;gene=sfsA;locus_tag=GGE_1502 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 2288 2990 . - . ID=id-GGE_1502-3;Dbxref=InterPro:IPR005224,TIGRFAM:TIGR00230;Note=sfsa: sugar fermentation stimulation protein~sugar fermentation stimulation protein;gbkey=misc_feature;gene=sfsA;locus_tag=GGE_1502 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 2324 2918 . - . ID=id-GGE_1502-4;Dbxref=InterPro:IPR005224,PFAM:PF03749;Note=sfsa~sugar fermentation stimulation protein;gbkey=misc_feature;gene=sfsA;locus_tag=GGE_1502 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 2319 2328 . + . ID=id-AFQR01000024.1:2319..2328;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 3013 4407 . - . ID=gene-GGE_1503;Name=hmrM;gbkey=Gene;gene=hmrM;gene_biotype=protein_coding;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank CDS 3013 4407 . - 0 ID=cds-EGT80949.1;Parent=gene-GGE_1503;Dbxref=GeneID:1175766,InterPro:IPR002528,PFAM:PF01554,TIGRFAM:TIGR00797,NCBI_GP:EGT80949.1;Name=EGT80949.1;Ontology_term=GO:0006855,GO:0055085,GO:0016020,GO:0015297,GO:0015238;gbkey=CDS;gene=hmrM;go_component=membrane|0016020||;go_function=antiporter activity|0015297||,drug transmembrane transporter activity|0015238||;go_process=drug transmembrane transport|0006855||,transmembrane transport|0055085||;locus_tag=GGE_1503;product=Multidrug resistance protein hmrM;protein_id=EGT80949.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3037 4384 . - . ID=id-GGE_1503;Dbxref=InterPro:IPR002528;Note=HMMPanther:PTHR11206:SF7~multidrug resistance pump~HMMPanther:PTHR11206~family not named~multi antimicrobial extrusion protein;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3076 3082 . - . ID=id-GGE_1503-2;Note=transmembrane_regions;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3079 4231 . - . ID=id-GGE_1503-3;Dbxref=InterPro:IPR002528,TIGRFAM:TIGR00797;Note=mate: mate efflux family protein~multi antimicrobial extrusion protein;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3079 3493 . - . ID=id-GGE_1503-4;Dbxref=InterPro:IPR002528,PFAM:PF01554;Note=mate~multi antimicrobial extrusion protein;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3088 3484 . - . ID=id-GGE_1503-5;Note=superfamily%3B label: MatE superfamily;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3091 4324 . - . ID=id-GGE_1503-6;Note=multi-dom%3B label: PRK01766;gbkey=misc_feature;gene=hmrM;locus_tag=GGE_1503 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3049 4084 . + . ID=id-AFQR01000024.1:3049..4084;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3049 3052 . + . ID=id-AFQR01000024.1:3049..3052;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3058 3196 . + . ID=id-AFQR01000024.1:3058..3196;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3067 3979 . + . ID=id-AFQR01000024.1:3067..3979;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3067 3415 . + . ID=id-AFQR01000024.1:3067..3415;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3070 4288 . + . ID=id-AFQR01000024.1:3070..4288;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3073 4186 . + . ID=id-AFQR01000024.1:3073..4186;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 4060 . + . ID=id-AFQR01000024.1:3082..4060;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3982 . + . ID=id-AFQR01000024.1:3082..3982;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3877 . + . ID=id-AFQR01000024.1:3082..3877;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3751 . + . ID=id-AFQR01000024.1:3082..3751;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3598 . + . ID=id-AFQR01000024.1:3082..3598;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3502 . + . ID=id-AFQR01000024.1:3082..3502;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3304 . + . ID=id-AFQR01000024.1:3082..3304;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3082 3187 . + . ID=id-AFQR01000024.1:3082..3187;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 3499 3760 . + . ID=id-AFQR01000024.1:3499..3760;Dbxref=InterPro:IPR002528,PFAM:PF01554;Note=superfamily~mate~multi antimicrobial extrusion protein%3B label: MatE superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 4450 5064 . + . ID=gene-GGE_1504;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank CDS 4450 5064 . + 0 ID=cds-EGT80950.1;Parent=gene-GGE_1504;Dbxref=GeneID:1172947,InterPro:IPR001783,InterPro:IPR017938,InterPro:IPR023366,PFAM:PF00677,PIR:PIRSF000498,TIGRFAM:TIGR00187,NCBI_GP:EGT80950.1;Name=EGT80950.1;Ontology_term=GO:0009231,GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||;go_process=riboflavin biosynthetic process|0009231||;locus_tag=GGE_1504;product=Riboflavin synthase alpha chain;protein_id=EGT80950.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4450 5059 . + . ID=id-GGE_1504;Dbxref=InterPro:IPR001783,TIGRFAM:TIGR00187;Note=ribe: riboflavin synthase%2C alpha subunit~lumazine-binding protein;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4450 5056 . + . ID=id-GGE_1504-2;Note=multi-dom%3B label: PRK13020;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4450 5053 . + . ID=id-GGE_1504-3;Dbxref=InterPro:IPR001783,PIR:PIRSF000498;Note=riboflavin synthase%2C alpha subunit~lumazine-binding protein;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4450 4741 . + . ID=id-GGE_1504-4;Dbxref=InterPro:IPR001783;Note=ProfileScan:PS51177~lumazine_bind~lumazine-binding protein;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4450 4726 . + . ID=id-GGE_1504-5;Dbxref=InterPro:IPR017938;Note=superfamily:SSF63380~riboflavin synthase domain-like~riboflavin synthase-like beta-barrel;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4456 5056 . + . ID=id-GGE_1504-6;Dbxref=InterPro:IPR001783;Note=HMMPanther:PTHR21098~family not named~lumazine-binding protein;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4459 4705 . + . ID=id-GGE_1504-7;Dbxref=InterPro:IPR001783,PFAM:PF00677;Note=superfamily~lum_binding~lumazine-binding protein%3B label: Lum_binding superfamily;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4465 4756 . + . ID=id-GGE_1504-8;Dbxref=InterPro:IPR023366;Note=Gene3D:2.40.30.20~atpase%2C f1/a1 complex%2C alpha subunit;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4729 4780 . + . ID=id-GGE_1504-9;Dbxref=InterPro:IPR017938;Note=superfamily:SSF63380~riboflavin synthase domain-like~riboflavin synthase-like beta-barrel;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4744 4744 . + . ID=id-GGE_1504-10;Dbxref=InterPro:IPR001783;Note=ProfileScan:PS51177~lumazine_bind~lumazine-binding protein;gbkey=misc_feature;gene=ribE;locus_tag=GGE_1504 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4708 4750 . - . ID=id-AFQR01000024.1:4708..4750;Dbxref=InterPro:IPR001783,PFAM:PF00677;Note=superfamily~lum_binding~lumazine-binding protein%3B label: Lum_binding superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 4726 4771 . - . ID=id-AFQR01000024.1:4726..4771;Dbxref=InterPro:IPR023366;Note=Gene3D:2.40.30.20~atpase%2C f1/a1 complex%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 5144 5791 . - . ID=gene-GGE_1505;Name=GGE_1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank CDS 5144 5791 . - 0 ID=cds-EGT80951.1;Parent=gene-GGE_1505;Dbxref=GeneID:223041972,InterPro:IPR005618,InterPro:IPR011250,PFAM:PF03922,NCBI_GP:EGT80951.1;Name=EGT80951.1;Note=ZP_03612156;Ontology_term=GO:0009279,GO:0016021,GO:0019867;gbkey=CDS;go_component=cell outer membrane|0009279||,integral to membrane|0016021||,outer membrane|0019867||;locus_tag=GGE_1505;product=outer membrane protein W precursor;protein_id=EGT80951.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 5144 5789 . - . ID=id-GGE_1505;Note=superfamily%3B label: Surface_Ag_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 5168 5186 . - . ID=id-GGE_1505-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 5210 5726 . - . ID=id-GGE_1505-3;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 5213 5723 . - . ID=id-GGE_1505-4;Dbxref=InterPro:IPR005618,PFAM:PF03922;Note=ompw~outer membrane protein%2C ompw;gbkey=misc_feature;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 5282 5603 . - . ID=id-GGE_1505-5;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1505 GCA_000222085.2|AFQR01000024.1 Genbank gene 6056 6652 . - . ID=gene-GGE_1506;Name=GGE_1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1506 GCA_000222085.2|AFQR01000024.1 Genbank CDS 6056 6652 . - 0 ID=cds-EGT80952.1;Parent=gene-GGE_1506;Dbxref=GeneID:1176048,InterPro:IPR015414,PFAM:PF09335,NCBI_GP:EGT80952.1;Name=EGT80952.1;Note=HI_1629;gbkey=CDS;locus_tag=GGE_1506;product=Hypothetical protein;protein_id=EGT80952.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6077 6125 . - . ID=id-GGE_1506;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1506 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6143 6449 . - . ID=id-GGE_1506-2;Note=superfamily%3B label: SNARE_assoc superfamily;gbkey=misc_feature;locus_tag=GGE_1506 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6143 6446 . - . ID=id-GGE_1506-3;Dbxref=InterPro:IPR015414,PFAM:PF09335;Note=snare_assoc~snare associated golgi protein;gbkey=misc_feature;locus_tag=GGE_1506 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6110 6599 . + . ID=id-AFQR01000024.1:6110..6599;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6110 6584 . + . ID=id-AFQR01000024.1:6110..6584;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6125 6458 . + . ID=id-AFQR01000024.1:6125..6458;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6125 6221 . + . ID=id-AFQR01000024.1:6125..6221;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 6877 7164 . + . ID=gene-GGE_1507;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank CDS 6877 7164 . + 0 ID=cds-EGT80953.1;Parent=gene-GGE_1507;Dbxref=GeneID:166223687,InterPro:IPR011035,InterPro:IPR020055,InterPro:IPR020056,PFAM:PF01386,NCBI_GP:EGT80953.1;Name=EGT80953.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0008097,GO:0003735;gbkey=CDS;gene=rplY;go_component=intracellular|0005622||,ribosome|0005840||;go_function=5S rRNA binding|0008097||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1507;product=50S ribosomal protein L25;protein_id=EGT80953.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6883 7159 . + . ID=id-GGE_1507;Dbxref=InterPro:IPR011035;Note=superfamily:SSF50715~ribosomal protein l25-like~ribosomal protein l25/gln-trna synthetase%2C anti-codon-binding domain;gbkey=misc_feature;gene=rplY;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6886 7156 . + . ID=id-GGE_1507-2;Dbxref=InterPro:IPR020055;Note=HAMAP:MF_01336~ribosomal_l25~ribosomal protein l25%2C short-form;gbkey=misc_feature;gene=rplY;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6886 7153 . + . ID=id-GGE_1507-3;Dbxref=InterPro:IPR020056;Note=specific~superfamily~Gene3D:2.40.240.10~ribosomal protein l25/gln-trna synthetase%2C beta-barrel domain%3B label: Ribosomal_L25_TL5_CTC;gbkey=misc_feature;gene=rplY;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6889 7150 . + . ID=id-GGE_1507-4;Dbxref=InterPro:IPR020055;Note=BlastProDom:PD012503~q4ql66_haei8_q4ql66~ribosomal protein l25%2C short-form;gbkey=misc_feature;gene=rplY;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 6895 7138 . + . ID=id-GGE_1507-5;Dbxref=InterPro:IPR020055,PFAM:PF01386;Note=ribosomal_l25p~ribosomal protein l25%2C short-form;gbkey=misc_feature;gene=rplY;locus_tag=GGE_1507 GCA_000222085.2|AFQR01000024.1 Genbank gene 7258 7830 . - . ID=gene-GGE_1508;Name=GGE_1508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1508 GCA_000222085.2|AFQR01000024.1 Genbank CDS 7258 7830 . - 0 ID=cds-EGT80954.1;Parent=gene-GGE_1508;Dbxref=GeneID:1176049,PFAM:PF10881,NCBI_GP:EGT80954.1;Name=EGT80954.1;Note=HI_1631;gbkey=CDS;locus_tag=GGE_1508;product=Hypothetical protein;protein_id=EGT80954.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 7273 7318 . - . ID=id-GGE_1508;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1508 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 7282 7303 . - . ID=id-GGE_1508-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1508 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 7453 7579 . - . ID=id-GGE_1508-3;Dbxref=PFAM:PF10881;Note=duf2726;gbkey=misc_feature;locus_tag=GGE_1508 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 7453 7573 . - . ID=id-GGE_1508-4;Note=superfamily%3B label: DUF2726 superfamily;gbkey=misc_feature;locus_tag=GGE_1508 GCA_000222085.2|AFQR01000024.1 Genbank gene 8676 10028 . + . ID=gene-GGE_1509;Name=GGE_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank CDS 8676 10028 . + 0 ID=cds-EGT80955.1;Parent=gene-GGE_1509;Dbxref=GeneID:145635083,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR005260,InterPro:IPR018042,PFAM:PF00696,TIGRFAM:TIGR00656,TIGRFAM:TIGR00657,NCBI_GP:EGT80955.1;Name=EGT80955.1;Note=ZP_01790789;Ontology_term=GO:0009058,GO:0008652,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||;go_process=biosynthetic process|0009058||,cellular amino acid biosynthetic process|0008652||;locus_tag=GGE_1509;product=adenylosuccinate synthetase;protein_id=EGT80955.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8676 10026 . + . ID=id-GGE_1509;Note=HMMPanther:PTHR21499:SF20~lysine-sensitive aspartokinase 3~HMMPanther:PTHR21499~family not named;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8682 10023 . + . ID=id-GGE_1509-2;Dbxref=InterPro:IPR001341,InterPro:IPR005260,TIGRFAM:TIGR00656,TIGRFAM:TIGR00657;Note=asp_kin_monofn: asparate kinase%2C monof~aspartate kinase%2C monofunctional class~asp_kinases: aspartate kinase~aspartate kinase domain;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8685 9555 . + . ID=id-GGE_1509-3;Dbxref=InterPro:IPR001048;Note=superfamily:SSF53633~carbamate kinase-like~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8688 10017 . + . ID=id-GGE_1509-4;Note=multi-dom%3B label: PRK09084;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8688 9540 . + . ID=id-GGE_1509-5;Note=superfamily%3B label: AAK superfamily;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8694 9498 . + . ID=id-GGE_1509-6;Dbxref=InterPro:IPR001048,PFAM:PF00696;Note=aa_kinase~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8694 8703 . + . ID=id-GGE_1509-7;Dbxref=InterPro:IPR018042;Note=PatternScan:PS00324~aspartokinase~aspartate kinase%2C conserved site;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8979 9258 . + . ID=id-GGE_1509-8;Dbxref=InterPro:IPR001048;Note=Gene3D:3.40.1160.10~aspartate/glutamate/uridylate kinase;gbkey=misc_feature;locus_tag=GGE_1509 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8709 9606 . - . ID=id-AFQR01000024.1:8709..9606;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8724 8964 . - . ID=id-AFQR01000024.1:8724..8964;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8727 9753 . - . ID=id-AFQR01000024.1:8727..9753;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8790 9639 . - . ID=id-AFQR01000024.1:8790..9639;Note=superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8868 9837 . - . ID=id-AFQR01000024.1:8868..9837;Note=specific~superfamily~superfamily:SSF55021~act-like%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8960 8969 . - . ID=id-AFQR01000024.1:8960..8969;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 8976 9564 . - . ID=id-AFQR01000024.1:8976..9564;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10039 10048 . + . ID=id-AFQR01000024.1:10039..10048;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10564 10573 . + . ID=id-AFQR01000024.1:10564..10573;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 10583 11257 . - . ID=gene-GGE_1510;Name=neuA;gbkey=Gene;gene=neuA;gene_biotype=protein_coding;locus_tag=GGE_1510 GCA_000222085.2|AFQR01000024.1 Genbank CDS 10583 11257 . - 0 ID=cds-EGT80956.1;Parent=gene-GGE_1510;Dbxref=GeneID:2833483,InterPro:IPR003329,PFAM:PF02348,NCBI_GP:EGT80956.1;Name=EGT80956.1;Ontology_term=GO:0009103;gbkey=CDS;gene=neuA;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_1510;product=Putative N-acylneuraminate cytidylyltransferase;protein_id=EGT80956.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10583 11252 . - . ID=id-GGE_1510;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases~HMMPanther:PTHR21485:SF3~cmp-n-acetylneuraminic acid synthase~HMMPanther:PTHR21485~family not named;gbkey=misc_feature;gene=neuA;locus_tag=GGE_1510 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10583 11249 . - . ID=id-GGE_1510-2;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=neuA;locus_tag=GGE_1510 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10595 11234 . - . ID=id-GGE_1510-3;Note=specific~superfamily%3B label: CMP-NeuAc_Synthase;gbkey=misc_feature;gene=neuA;locus_tag=GGE_1510 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 10595 11138 . - . ID=id-GGE_1510-4;Dbxref=InterPro:IPR003329,PFAM:PF02348;Note=ctp_transf_3~acylneuraminate cytidylyltransferase;gbkey=misc_feature;gene=neuA;locus_tag=GGE_1510 GCA_000222085.2|AFQR01000024.1 Genbank gene 11371 12033 . + . ID=gene-GGE_1511;Name=GGE_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank CDS 11371 12033 . + 0 ID=cds-EGT80957.1;Parent=gene-GGE_1511;Dbxref=GeneID:2499209,InterPro:IPR000415,PFAM:PF00881,NCBI_GP:EGT80957.1;Name=EGT80957.1;Note=HI_1278;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||;locus_tag=GGE_1511;product=Putative NADPH nitroreductase;protein_id=EGT80957.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11371 12031 . + . ID=id-GGE_1511;Note=HMMPanther:PTHR23026:SF43~nadph nitroreductase~HMMPanther:PTHR23026~family not named;gbkey=misc_feature;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11392 12007 . + . ID=id-GGE_1511-2;Dbxref=InterPro:IPR000415;Note=Gene3D:3.40.109.10~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11395 11995 . + . ID=id-GGE_1511-3;Note=specific~superfamily%3B label: NfsB_like_nitroreductase;gbkey=misc_feature;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11398 12004 . + . ID=id-GGE_1511-4;Dbxref=InterPro:IPR000415;Note=superfamily:SSF55469~fmn-dependent nitroreductase-like~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11413 11929 . + . ID=id-GGE_1511-5;Dbxref=InterPro:IPR000415,PFAM:PF00881;Note=nitroreductase~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1511 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11410 11707 . - . ID=id-AFQR01000024.1:11410..11707;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 11770 11779 . - . ID=id-AFQR01000024.1:11770..11779;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 12105 12374 . + . ID=gene-GGE_1512;Name=GGE_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1512 GCA_000222085.2|AFQR01000024.1 Genbank CDS 12105 12374 . + 0 ID=cds-EGT80958.1;Parent=gene-GGE_1512;Dbxref=GeneID:240948476,InterPro:IPR007159,PFAM:PF04014,NCBI_GP:EGT80958.1;Name=EGT80958.1;Note=ZP_04752852;gbkey=CDS;locus_tag=GGE_1512;product=putative antitoxin-like protein;protein_id=EGT80958.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12105 12372 . + . ID=id-GGE_1512;Note=superfamily~Gene3D:2.10.260.10%3B label: SpoVT_AbrB superfamily;gbkey=misc_feature;locus_tag=GGE_1512 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12105 12336 . + . ID=id-GGE_1512-2;Note=superfamily:SSF89447~abrb/maze/mraz-like;gbkey=misc_feature;locus_tag=GGE_1512 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12138 12225 . + . ID=id-GGE_1512-3;Dbxref=InterPro:IPR007159,PFAM:PF04014;Note=spovt_abrb~transcription regulator abrb/spov%2C predicted;gbkey=misc_feature;locus_tag=GGE_1512 GCA_000222085.2|AFQR01000024.1 Genbank gene 12368 12730 . + . ID=gene-GGE_1513;Name=GGE_1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1513 GCA_000222085.2|AFQR01000024.1 Genbank CDS 12368 12730 . + 0 ID=cds-EGT80959.1;Parent=gene-GGE_1513;Dbxref=GeneID:167855613,InterPro:IPR003477,InterPro:IPR011067,PFAM:PF02452,NCBI_GP:EGT80959.1;Name=EGT80959.1;Note=ZP_02478372;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1513;product=putative plasmid maintenance toxin/Cell growth inhibitor;protein_id=EGT80959.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12368 12722 . + . ID=id-GGE_1513;Dbxref=InterPro:IPR011067;Note=superfamily:SSF50118~cell growth inhibitor/plasmid maintenance toxic component~plasmid maintenance toxin/cell growth inhibitor;gbkey=misc_feature;locus_tag=GGE_1513 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12386 12701 . + . ID=id-GGE_1513-2;Dbxref=InterPro:IPR011067;Note=Gene3D:2.30.30.110~plasmid maintenance toxin/cell growth inhibitor;gbkey=misc_feature;locus_tag=GGE_1513 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12389 12701 . + . ID=id-GGE_1513-3;Note=superfamily%3B label: PemK superfamily;gbkey=misc_feature;locus_tag=GGE_1513 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12389 12692 . + . ID=id-GGE_1513-4;Dbxref=InterPro:IPR003477,PFAM:PF02452;Note=pemk~pemk-like protein;gbkey=misc_feature;locus_tag=GGE_1513 GCA_000222085.2|AFQR01000024.1 Genbank gene 12766 13878 . - . ID=gene-GGE_1514;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank CDS 12766 13878 . - 0 ID=cds-EGT80960.1;Parent=gene-GGE_1514;Dbxref=GeneID:12230999,InterPro:IPR000808,InterPro:IPR019591,PFAM:PF10609,NCBI_GP:EGT80960.1;Name=EGT80960.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mrp;go_function=ATP binding|0005524||;locus_tag=GGE_1514;product=Protein mrp;protein_id=EGT80960.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12766 13873 . - . ID=id-GGE_1514;Note=multi-dom%3B label: PRK11670;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12802 13039 . - . ID=id-GGE_1514-2;Note=superfamily:SSF117916~fe-s cluster assembly (fsca) domain-like;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12805 13828 . - . ID=id-GGE_1514-3;Note=HMMPanther:PTHR23264:SF4~mrp-related nucleotide-binding protein~HMMPanther:PTHR23264~family not named;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 13036 13501 . - . ID=id-GGE_1514-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 13048 13534 . - . ID=id-GGE_1514-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 13147 13336 . - . ID=id-GGE_1514-6;Note=specific~superfamily%3B label: MRP-like;gbkey=misc_feature;gene=mrp;locus_tag=GGE_1514 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12805 12805 . + . ID=id-AFQR01000024.1:12805..12805;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12811 13102 . + . ID=id-AFQR01000024.1:12811..13102;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 12817 13405 . + . ID=id-AFQR01000024.1:12817..13405;Dbxref=InterPro:IPR000808;Note=PatternScan:PS01215~mrp~mrp%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 13009 13414 . + . ID=id-AFQR01000024.1:13009..13414;Dbxref=InterPro:IPR019591,PFAM:PF10609;Note=para~atpase-like%2C para/mind;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 13928 13937 . + . ID=id-AFQR01000024.1:13928..13937;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank gene 13997 14467 . - . ID=gene-GGE_1515;Name=GGE_1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1515 GCA_000222085.2|AFQR01000024.1 Genbank CDS 13997 14467 . - 0 ID=cds-EGT80961.1;Parent=gene-GGE_1515;Dbxref=InterPro:IPR002656,PFAM:PF01757,NCBI_GP:EGT80961.1;Name=EGT80961.1;Note=Hypothetical acyltransferase 3;Ontology_term=GO:0016747;gbkey=CDS;go_function=transferase activity transferring acyl groups other than amino-acyl groups|0016747||;locus_tag=GGE_1515;product=putative acyltransferase 3;protein_id=EGT80961.1;transl_table=11 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14009 14390 . - . ID=id-GGE_1515;Dbxref=InterPro:IPR002656,PFAM:PF01757;Note=acyl_transf_3~acyltransferase 3;gbkey=misc_feature;locus_tag=GGE_1515 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14048 14066 . - . ID=id-GGE_1515-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1515 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14057 14408 . - . ID=id-GGE_1515-3;Note=superfamily%3B label: COG1835 superfamily;gbkey=misc_feature;locus_tag=GGE_1515 GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14066 14342 . + . ID=id-AFQR01000024.1:14066..14342;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14066 14246 . + . ID=id-AFQR01000024.1:14066..14246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000024.1 Genbank sequence_feature 14066 14144 . + . ID=id-AFQR01000024.1:14066..14144;Note=transmembrane_regions;gbkey=misc_feature ##sequence-region AFQR01000023.1 1 18174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000023.1 Genbank region 1 18174 . + . ID=AFQR01000023.1:1..18174;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000023.1 Genbank gene 1016 1630 . + . ID=gene-GGE_1474;Name=GGE_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1474 GCA_000222085.2|AFQR01000023.1 Genbank CDS 1016 1630 . + 0 ID=cds-EGT80966.1;Parent=gene-GGE_1474;Dbxref=GeneID:319896500,NCBI_GP:EGT80966.1;Name=EGT80966.1;Note=YP_004134693;gbkey=CDS;locus_tag=GGE_1474;product=Hypothetical protein;protein_id=EGT80966.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 1082 1265 . - . ID=id-AFQR01000023.1:1082..1265;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 1208 1424 . - . ID=id-AFQR01000023.1:1208..1424;Dbxref=InterPro:IPR020088;Note=BlastProDom:PD055258~y1402_haein_p44177~uncharacterised protein family hi1402;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 1249 1258 . - . ID=id-AFQR01000023.1:1249..1258;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 1880 2221 . + . ID=gene-GGE_1475;Name=GGE_1475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1475 GCA_000222085.2|AFQR01000023.1 Genbank CDS 1880 2221 . + 0 ID=cds-EGT80967.1;Parent=gene-GGE_1475;Dbxref=GeneID:225076673,NCBI_GP:EGT80967.1;Name=EGT80967.1;Note=ZP_03719872~NEIFLAOT_01724;gbkey=CDS;locus_tag=GGE_1475;product=Hypothetical protein;protein_id=EGT80967.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 2182 2191 . + . ID=id-GGE_1475;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1475 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 2420 2423 . + . ID=id-AFQR01000023.1:2420..2423;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 2877 4061 . + . ID=gene-GGE_1476;Name=GGE_1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1476 GCA_000222085.2|AFQR01000023.1 Genbank CDS 2877 4061 . + 0 ID=cds-EGT80968.1;Parent=gene-GGE_1476;Dbxref=GeneID:145636827,InterPro:IPR007067,PFAM:PF04984,NCBI_GP:EGT80968.1;Name=EGT80968.1;Note=ZP_01792492;gbkey=CDS;locus_tag=GGE_1476;product=phage tail sheath-like protein;protein_id=EGT80968.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 2877 4038 . + . ID=id-GGE_1476;Note=superfamily%3B label: Phage_sheath_1 superfamily;gbkey=misc_feature;locus_tag=GGE_1476 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 2877 3153 . + . ID=id-GGE_1476-2;Dbxref=InterPro:IPR007067,PFAM:PF04984;Note=phage_sheath_1~phage tail sheath protein;gbkey=misc_feature;locus_tag=GGE_1476 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 3162 3726 . + . ID=id-GGE_1476-3;Dbxref=InterPro:IPR007067,PFAM:PF04984;Note=phage_sheath_1~phage tail sheath protein;gbkey=misc_feature;locus_tag=GGE_1476 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 2913 3483 . - . ID=id-AFQR01000023.1:2913..3483;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 4065 4571 . + . ID=gene-GGE_1477;Name=GGE_1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1477 GCA_000222085.2|AFQR01000023.1 Genbank CDS 4065 4571 . + 0 ID=cds-EGT80969.1;Parent=gene-GGE_1477;Dbxref=GeneID:145636826,InterPro:IPR006498,PFAM:PF04985,TIGRFAM:TIGR01611,NCBI_GP:EGT80969.1;Name=EGT80969.1;Note=ZP_01792491;gbkey=CDS;locus_tag=GGE_1477;product=phage-related tail protein;protein_id=EGT80969.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 4071 4566 . + . ID=id-GGE_1477;Dbxref=InterPro:IPR006498,PFAM:PF04985,TIGRFAM:TIGR01611;Note=superfamily~phage_tube~phage major tail tube protein~tail_tube: phage major tail tube protein~phage major tail tube protein%3B label: Phage_tube superfamily;gbkey=misc_feature;locus_tag=GGE_1477 GCA_000222085.2|AFQR01000023.1 Genbank gene 4657 4956 . + . ID=gene-GGE_1478;Name=GGE_1478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1478 GCA_000222085.2|AFQR01000023.1 Genbank CDS 4657 4956 . + 0 ID=cds-EGT80970.1;Parent=gene-GGE_1478;Dbxref=GeneID:145631935,InterPro:IPR009322,PFAM:PF06158,NCBI_GP:EGT80970.1;Name=EGT80970.1;Note=ZP_01787690;gbkey=CDS;locus_tag=GGE_1478;product=Putative phage-related protein;protein_id=EGT80970.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 4678 4915 . + . ID=id-GGE_1478;Note=superfamily%3B label: Phage_E superfamily;gbkey=misc_feature;locus_tag=GGE_1478 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 4678 4912 . + . ID=id-GGE_1478-2;Dbxref=InterPro:IPR009322,PFAM:PF06158;Note=phage_e~phage tail e;gbkey=misc_feature;locus_tag=GGE_1478 GCA_000222085.2|AFQR01000023.1 Genbank gene 4956 5102 . + . ID=gene-GGE_1479;Name=GGE_1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1479 GCA_000222085.2|AFQR01000023.1 Genbank CDS 4956 5102 . + 0 ID=cds-EGT80971.1;Parent=gene-GGE_1479;Dbxref=InterPro:IPR009493,PFAM:PF06528,NCBI_GP:EGT80971.1;Name=EGT80971.1;Note=Hypothetical phage P2 GpE;gbkey=CDS;locus_tag=GGE_1479;product=putative phage P2 GpE;protein_id=EGT80971.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 4986 5073 . + . ID=id-GGE_1479;Note=superfamily%3B label: Phage_P2_GpE superfamily;gbkey=misc_feature;locus_tag=GGE_1479 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 4986 5070 . + . ID=id-GGE_1479-2;Dbxref=InterPro:IPR009493,PFAM:PF06528;Note=phage_p2_gpe~phage p2 gpe;gbkey=misc_feature;locus_tag=GGE_1479 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5243 5252 . - . ID=id-AFQR01000023.1:5243..5252;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 5269 5607 . + . ID=gene-GGE_1480;Name=GGE_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1480 GCA_000222085.2|AFQR01000023.1 Genbank CDS 5269 5607 . + 0 ID=cds-EGT80972.1;Parent=gene-GGE_1480;Dbxref=GeneID:229845284,NCBI_GP:EGT80972.1;Name=EGT80972.1;Note=ZP_04465416~CGSHi6P18H1_01979;gbkey=CDS;locus_tag=GGE_1480;product=Hypothetical protein;protein_id=EGT80972.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5314 5374 . + . ID=id-GGE_1480;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1480 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5305 5542 . - . ID=id-AFQR01000023.1:5305..5542;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5326 5359 . - . ID=id-AFQR01000023.1:5326..5359;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5338 5479 . - . ID=id-AFQR01000023.1:5338..5479;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 5608 6045 . + . ID=gene-GGE_1481;Name=GGE_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1481 GCA_000222085.2|AFQR01000023.1 Genbank CDS 5608 6045 . + 0 ID=cds-EGT80973.1;Parent=gene-GGE_1481;Dbxref=GeneID:229845283,InterPro:IPR009734,InterPro:IPR016912,PFAM:PF06995,PIR:PIRSF029208,NCBI_GP:EGT80973.1;Name=EGT80973.1;Note=ZP_04465415;gbkey=CDS;locus_tag=GGE_1481;product=phage P2 GpU family protein;protein_id=EGT80973.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5608 6037 . + . ID=id-GGE_1481;Dbxref=InterPro:IPR016912,PIR:PIRSF029208;Note=phage tail protein%2C gpu type~phage tail%2C gpu;gbkey=misc_feature;locus_tag=GGE_1481 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 5641 5971 . + . ID=id-GGE_1481-2;Dbxref=InterPro:IPR009734,PFAM:PF06995;Note=superfamily~phage_p2_gpu~phage p2 gpu%3B label: Phage_P2_GpU superfamily;gbkey=misc_feature;locus_tag=GGE_1481 GCA_000222085.2|AFQR01000023.1 Genbank gene 6045 7238 . + . ID=gene-GGE_1482;Name=GGE_1482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1482 GCA_000222085.2|AFQR01000023.1 Genbank CDS 6045 7238 . + 0 ID=cds-EGT80974.1;Parent=gene-GGE_1482;Dbxref=GeneID:319775379,InterPro:IPR010277,PFAM:PF05954,NCBI_GP:EGT80974.1;Name=EGT80974.1;Note=YP_004137867;gbkey=CDS;locus_tag=GGE_1482;product=Putative phage-related tail protein;protein_id=EGT80974.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 6045 7176 . + . ID=id-GGE_1482;Note=superfamily%3B label: COG3500 superfamily;gbkey=misc_feature;locus_tag=GGE_1482 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 6096 7149 . + . ID=id-GGE_1482-2;Dbxref=InterPro:IPR010277,PFAM:PF05954;Note=phage_gpd~bacteriophage p2%2C gpd%2C late control;gbkey=misc_feature;locus_tag=GGE_1482 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 6123 7107 . + . ID=id-GGE_1482-3;Note=multi-dom%3B label: Phage_GPD;gbkey=misc_feature;locus_tag=GGE_1482 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 6099 7185 . - . ID=id-AFQR01000023.1:6099..7185;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 6240 6414 . - . ID=id-AFQR01000023.1:6240..6414;Note=Gene3D:3.55.50.10;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 7255 7806 . - . ID=gene-GGE_1483;Name=GGE_1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1483 GCA_000222085.2|AFQR01000023.1 Genbank CDS 7255 7806 . - 0 ID=cds-EGT80975.1;Parent=gene-GGE_1483;Dbxref=GeneID:48696929,NCBI_GP:EGT80975.1;Name=EGT80975.1;Note=YP_024692;gbkey=CDS;locus_tag=GGE_1483;product=gp19;protein_id=EGT80975.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 7309 7390 . + . ID=id-AFQR01000023.1:7309..7390;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 7324 7456 . + . ID=id-AFQR01000023.1:7324..7456;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 7960 8199 . - . ID=gene-GGE_1484;Name=GGE_1484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1484 GCA_000222085.2|AFQR01000023.1 Genbank CDS 7960 8199 . - 0 ID=cds-EGT80976.1;Parent=gene-GGE_1484;Dbxref=GeneID:229845281,InterPro:IPR008613,PFAM:PF05901,NCBI_GP:EGT80976.1;Name=EGT80976.1;Note=ZP_04465413;gbkey=CDS;locus_tag=GGE_1484;product=prophage MuMc02%2C nuclease%2C putative;protein_id=EGT80976.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8062 8086 . + . ID=id-AFQR01000023.1:8062..8086;Dbxref=InterPro:IPR008613,PFAM:PF05901;Note=excalibur~excalibur calcium-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8068 8080 . + . ID=id-AFQR01000023.1:8068..8080;Note=superfamily%3B label: Excalibur superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8165 8174 . + . ID=id-AFQR01000023.1:8165..8174;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 8249 8581 . - . ID=gene-GGE_1485;Name=GGE_1485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1485 GCA_000222085.2|AFQR01000023.1 Genbank CDS 8249 8581 . - 0 ID=cds-EGT80977.1;Parent=gene-GGE_1485;Dbxref=GeneID:324006756,NCBI_GP:EGT80977.1;Name=EGT80977.1;Note=EGB75975;gbkey=CDS;locus_tag=GGE_1485;product=hypothetical protein;protein_id=EGT80977.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8249 8336 . - . ID=id-GGE_1485;Note=BlastProDom:PD057827~q93ah3_9bact_q93ah3;gbkey=misc_feature;locus_tag=GGE_1485 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8318 8498 . + . ID=id-AFQR01000023.1:8318..8498;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 8318 8372 . + . ID=id-AFQR01000023.1:8318..8372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 8999 9448 . - . ID=gene-GGE_1486;Name=GGE_1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank CDS 8999 9448 . - 0 ID=cds-EGT80978.1;Parent=gene-GGE_1486;Dbxref=InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT80978.1;Name=EGT80978.1;Note=Hypothetical lambda repressor-like%2C DNA-binding;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1486;product=putative lambda repressor-like%2C DNA-binding protein;protein_id=EGT80978.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9011 9188 . - . ID=id-GGE_1486;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9011 9185 . - . ID=id-GGE_1486-2;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9014 9170 . - . ID=id-GGE_1486-3;Note=specific~superfamily%3B label: HTH_XRE;gbkey=misc_feature;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9023 9161 . - . ID=id-GGE_1486-4;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9023 9137 . - . ID=id-GGE_1486-5;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1486 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 9069 9078 . + . ID=id-AFQR01000023.1:9069..9078;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 9578 9772 . + . ID=gene-GGE_1487;Name=GGE_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1487 GCA_000222085.2|AFQR01000023.1 Genbank CDS 9578 9772 . + 0 ID=cds-EGT80979.1;Parent=gene-GGE_1487;Dbxref=GeneID:145636813,NCBI_GP:EGT80979.1;Name=EGT80979.1;Note=ZP_01792478~CGSHiHH_00992;gbkey=CDS;locus_tag=GGE_1487;product=Hypothetical protein;protein_id=EGT80979.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 10036 10278 . - . ID=gene-GGE_1488;Name=GGE_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1488 GCA_000222085.2|AFQR01000023.1 Genbank CDS 10036 10278 . - 0 ID=cds-EGT80980.1;Parent=gene-GGE_1488;Dbxref=GeneID:145631922,NCBI_GP:EGT80980.1;Name=EGT80980.1;Note=ZP_01787677~CGSHi22421_00732;gbkey=CDS;locus_tag=GGE_1488;product=Hypothetical protein;protein_id=EGT80980.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 10315 10608 . - . ID=gene-GGE_1489;Name=GGE_1489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1489 GCA_000222085.2|AFQR01000023.1 Genbank CDS 10315 10608 . - 0 ID=cds-EGT80981.1;Parent=gene-GGE_1489;Dbxref=GeneID:145631921,NCBI_GP:EGT80981.1;Name=EGT80981.1;Note=ZP_01787676~CGSHi22421_00727;gbkey=CDS;locus_tag=GGE_1489;product=Hypothetical protein;protein_id=EGT80981.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 10324 10381 . - . ID=id-GGE_1489;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1489 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 10595 10604 . + . ID=id-AFQR01000023.1:10595..10604;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 10689 10844 . + . ID=gene-GGE_1490;Name=GGE_1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1490 GCA_000222085.2|AFQR01000023.1 Genbank CDS 10689 10844 . + 0 ID=cds-EGT80982.1;Parent=gene-GGE_1490;Dbxref=GeneID:145631920,NCBI_GP:EGT80982.1;Name=EGT80982.1;Note=ZP_01787675~CGSHi22421_00722;gbkey=CDS;locus_tag=GGE_1490;product=Hypothetical protein;protein_id=EGT80982.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 11102 11102 . + . ID=id-AFQR01000023.1:11102..11102;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 11445 11705 . + . ID=gene-GGE_1491;Name=GGE_1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1491 GCA_000222085.2|AFQR01000023.1 Genbank CDS 11445 11705 . + 0 ID=cds-EGT80983.1;Parent=gene-GGE_1491;Dbxref=GeneID:145639947,NCBI_GP:EGT80983.1;Name=EGT80983.1;Note=ZP_01795546~CGSHiII_06973;gbkey=CDS;locus_tag=GGE_1491;product=Hypothetical protein;protein_id=EGT80983.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 11723 12121 . + . ID=gene-GGE_1492;Name=GGE_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1492 GCA_000222085.2|AFQR01000023.1 Genbank CDS 11723 12121 . + 0 ID=cds-EGT80984.1;Parent=gene-GGE_1492;Dbxref=GeneID:229845275,NCBI_GP:EGT80984.1;Name=EGT80984.1;Note=ZP_04465407~CGSHi6P18H1_01934;gbkey=CDS;locus_tag=GGE_1492;product=Hypothetical protein;protein_id=EGT80984.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 12019 12028 . + . ID=id-GGE_1492;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1492 GCA_000222085.2|AFQR01000023.1 Genbank gene 12272 12526 . + . ID=gene-GGE_1493;Name=GGE_1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1493 GCA_000222085.2|AFQR01000023.1 Genbank CDS 12272 12526 . + 0 ID=cds-EGT80985.1;Parent=gene-GGE_1493;Dbxref=GeneID:145631911,NCBI_GP:EGT80985.1;Name=EGT80985.1;Note=ZP_01787666~CGSHi22421_00677;gbkey=CDS;locus_tag=GGE_1493;product=Hypothetical protein;protein_id=EGT80985.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 12540 12588 . + . ID=id-AFQR01000023.1:12540..12588;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 12642 12929 . + . ID=gene-GGE_1494;Name=GGE_1494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1494 GCA_000222085.2|AFQR01000023.1 Genbank CDS 12642 12929 . + 0 ID=cds-EGT80986.1;Parent=gene-GGE_1494;Dbxref=GeneID:260582507,NCBI_GP:EGT80986.1;Name=EGT80986.1;Note=ZP_05850298;gbkey=CDS;locus_tag=GGE_1494;product=Hypothetical protein;protein_id=EGT80986.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 12939 15125 . + . ID=gene-GGE_1495;Name=GGE_1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1495 GCA_000222085.2|AFQR01000023.1 Genbank CDS 12939 15125 . + 0 ID=cds-EGT80987.1;Parent=gene-GGE_1495;Dbxref=GeneID:260582506,InterPro:IPR008766,PFAM:PF05840,NCBI_GP:EGT80987.1;Name=EGT80987.1;Note=ZP_05850297;Ontology_term=GO:0006260,GO:0016788;gbkey=CDS;go_function=hydrolase activity acting on ester bonds|0016788||;go_process=DNA replication|0006260||;locus_tag=GGE_1495;product=bacteriophage replication A;protein_id=EGT80987.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 13020 13029 . + . ID=id-GGE_1495;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1495 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 12969 14553 . - . ID=id-AFQR01000023.1:12969..14553;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 13038 13047 . - . ID=id-AFQR01000023.1:13038..13047;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 13491 13995 . - . ID=id-AFQR01000023.1:13491..13995;Dbxref=InterPro:IPR008766,PFAM:PF05840;Note=phage_gpa~replication endonuclease%2C probable%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 13494 13992 . - . ID=id-AFQR01000023.1:13494..13992;Note=superfamily%3B label: Phage_GPA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 13532 13541 . - . ID=id-AFQR01000023.1:13532..13541;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000023.1 Genbank gene 15144 15335 . + . ID=gene-GGE_1496;Name=GGE_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1496 GCA_000222085.2|AFQR01000023.1 Genbank CDS 15144 15335 . + 0 ID=cds-EGT80988.1;Parent=gene-GGE_1496;Dbxref=GeneID:145639941,NCBI_GP:EGT80988.1;Name=EGT80988.1;Note=ZP_01795540~CGSHiII_06943;gbkey=CDS;locus_tag=GGE_1496;product=Hypothetical protein;protein_id=EGT80988.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 15346 15555 . + . ID=gene-GGE_1497;Name=GGE_1497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1497 GCA_000222085.2|AFQR01000023.1 Genbank CDS 15346 15555 . + 0 ID=cds-EGT80989.1;Parent=gene-GGE_1497;Dbxref=GeneID:145639940,NCBI_GP:EGT80989.1;Name=EGT80989.1;Note=ZP_01795539~CGSHiII_06938;gbkey=CDS;locus_tag=GGE_1497;product=Hypothetical protein;protein_id=EGT80989.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank gene 15569 16090 . + . ID=gene-GGE_1498;Name=GGE_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1498 GCA_000222085.2|AFQR01000023.1 Genbank CDS 15569 16090 . + 0 ID=cds-EGT80990.1;Parent=gene-GGE_1498;Dbxref=GeneID:145639939,InterPro:IPR004518,PFAM:PF03819,NCBI_GP:EGT80990.1;Name=EGT80990.1;Note=ZP_01795538;gbkey=CDS;locus_tag=GGE_1498;product=putative pyrophosphatase-like protein;protein_id=EGT80990.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 15569 15788 . + . ID=id-GGE_1498;Note=superfamily:SSF101386~all-alpha ntp pyrophosphatases;gbkey=misc_feature;locus_tag=GGE_1498 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 15647 15710 . + . ID=id-GGE_1498-2;Dbxref=InterPro:IPR004518,PFAM:PF03819;Note=mazg~ntp pyrophosphohydrolase mazg%2C putative catalytic core;gbkey=misc_feature;locus_tag=GGE_1498 GCA_000222085.2|AFQR01000023.1 Genbank gene 16330 17385 . + . ID=gene-GGE_1499;Name=GGE_1499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank CDS 16330 17385 . + 0 ID=cds-EGT80991.1;Parent=gene-GGE_1499;Dbxref=GeneID:319775387,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT80991.1;Name=EGT80991.1;Note=YP_004137875;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1499;product=Prophage integrase;protein_id=EGT80991.1;transl_table=11 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16804 16852 . + . ID=id-GGE_1499;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16810 16837 . + . ID=id-GGE_1499-2;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16810 16828 . + . ID=id-GGE_1499-3;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16810 16819 . + . ID=id-GGE_1499-4;Note=multi-dom%3B label: Phage_integrase;gbkey=misc_feature;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16810 16816 . + . ID=id-GGE_1499-5;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1499 GCA_000222085.2|AFQR01000023.1 Genbank sequence_feature 16546 16552 . - . ID=id-AFQR01000023.1:16546..16552;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature ##sequence-region AFQR01000022.1 1 187351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000022.1 Genbank region 1 187351 . + . ID=AFQR01000022.1:1..187351;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000022.1 Genbank gene 25 444 . - . ID=gene-GGE_1298;Name=GGE_1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1298 GCA_000222085.2|AFQR01000022.1 Genbank CDS 25 444 . - 0 ID=cds-EGT81112.1;Parent=gene-GGE_1298;Dbxref=GeneID:319776172,InterPro:IPR005335,PFAM:PF03592,NCBI_GP:EGT81112.1;Name=EGT81112.1;Note=YP_004138660;Ontology_term=GO:0006323;gbkey=CDS;go_process=DNA packaging|0006323||;locus_tag=GGE_1298;product=putative terminase small subunit;protein_id=EGT81112.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40 280 . - . ID=id-GGE_1298;Dbxref=InterPro:IPR005335,PFAM:PF03592;Note=superfamily~terminase_2~terminase small subunit%3B label: Terminase_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1298 GCA_000222085.2|AFQR01000022.1 Genbank gene 463 774 . - . ID=gene-GGE_1299;Name=GGE_1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1299 GCA_000222085.2|AFQR01000022.1 Genbank CDS 463 774 . - 0 ID=cds-EGT81113.1;Parent=gene-GGE_1299;Dbxref=GeneID:145634379,NCBI_GP:EGT81113.1;Name=EGT81113.1;Note=ZP_01790089~CGSHiAA_06299;gbkey=CDS;locus_tag=GGE_1299;product=Hypothetical protein;protein_id=EGT81113.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank gene 798 1250 . - . ID=gene-GGE_1300;Name=GGE_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1300 GCA_000222085.2|AFQR01000022.1 Genbank CDS 798 1250 . - 0 ID=cds-EGT81114.1;Parent=gene-GGE_1300;Dbxref=GeneID:145641951,NCBI_GP:EGT81114.1;Name=EGT81114.1;Note=ZP_01797524~CGSHiR3021_02658;gbkey=CDS;locus_tag=GGE_1300;product=Hypothetical protein;protein_id=EGT81114.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 967 976 . + . ID=id-AFQR01000022.1:967..976;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 1264 1524 . - . ID=gene-GGE_1301;Name=GGE_1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1301 GCA_000222085.2|AFQR01000022.1 Genbank CDS 1264 1524 . - 0 ID=cds-EGT81115.1;Parent=gene-GGE_1301;Dbxref=GeneID:319776175,NCBI_GP:EGT81115.1;Name=EGT81115.1;Note=YP_004138663~HICON_15260;gbkey=CDS;locus_tag=GGE_1301;product=Hypothetical protein;protein_id=EGT81115.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank gene 1534 1782 . - . ID=gene-GGE_1302;Name=GGE_1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1302 GCA_000222085.2|AFQR01000022.1 Genbank CDS 1534 1782 . - 0 ID=cds-EGT81116.1;Parent=gene-GGE_1302;Dbxref=GeneID:270677667,InterPro:IPR010260,PFAM:PF05930,NCBI_GP:EGT81116.1;Name=EGT81116.1;Note=ZP_06222722;gbkey=CDS;locus_tag=GGE_1302;product=prophage CP4-57 regulatory protein;protein_id=EGT81116.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 1561 1726 . - . ID=id-GGE_1302;Note=superfamily%3B label: Phage_AlpA superfamily;gbkey=misc_feature;locus_tag=GGE_1302 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 1585 1699 . - . ID=id-GGE_1302-2;Dbxref=InterPro:IPR010260,PFAM:PF05930;Note=phage_alpa~prophage cp4-57 regulatory;gbkey=misc_feature;locus_tag=GGE_1302 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 2055 2682 . + . ID=id-AFQR01000022.1:2055..2682;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 2154 2448 . + . ID=id-AFQR01000022.1:2154..2448;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 2307 2343 . + . ID=id-AFQR01000022.1:2307..2343;Note=multi-dom%3B label: hsdR;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 2862 3539 . - . ID=gene-GGE_1303;Name=GGE_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1303 GCA_000222085.2|AFQR01000022.1 Genbank CDS 2862 3539 . - 0 ID=cds-EGT81117.1;Parent=gene-GGE_1303;Dbxref=GeneID:293391305,NCBI_GP:EGT81117.1;Name=EGT81117.1;Note=ZP_06635639~D7S_1453;gbkey=CDS;locus_tag=GGE_1303;product=Hypothetical protein;protein_id=EGT81117.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 2898 3153 . + . ID=id-AFQR01000022.1:2898..3153;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 4052 5308 . - . ID=gene-GGE_1304;Name=GGE_1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1304 GCA_000222085.2|AFQR01000022.1 Genbank CDS 4052 5308 . - 0 ID=cds-EGT81118.1;Parent=gene-GGE_1304;Dbxref=GeneID:319896982,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT81118.1;Name=EGT81118.1;Note=YP_004135177;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1304;product=prophage integrase;protein_id=EGT81118.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4052 5297 . - . ID=id-GGE_1304;Note=multi-dom%3B label: PRK09692;gbkey=misc_feature;locus_tag=GGE_1304 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4148 5156 . - . ID=id-GGE_1304-2;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1304 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4100 4262 . + . ID=id-AFQR01000022.1:4100..4262;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4325 4397 . + . ID=id-AFQR01000022.1:4325..4397;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4544 4706 . + . ID=id-AFQR01000022.1:4544..4706;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4562 4709 . + . ID=id-AFQR01000022.1:4562..4709;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4592 4700 . + . ID=id-AFQR01000022.1:4592..4700;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 4870 4879 . + . ID=id-AFQR01000022.1:4870..4879;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6073 6082 . - . ID=id-AFQR01000022.1:6073..6082;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 6088 7155 . + . ID=gene-GGE_1305;Name=GGE_1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank CDS 6088 7155 . + 0 ID=cds-EGT81119.1;Parent=gene-GGE_1305;Dbxref=GeneID:301156065,InterPro:IPR001126,InterPro:IPR017961,InterPro:IPR017962,InterPro:IPR017963,InterPro:IPR022880,PFAM:PF00817,PFAM:PF11798,PFAM:PF11799,NCBI_GP:EGT81119.1;Name=EGT81119.1;Note=CBW15536;Ontology_term=GO:0006281,GO:0003887,GO:0003684;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||,damaged DNA binding|0003684||;go_process=DNA repair|0006281||;locus_tag=GGE_1305;product=DNA polymerase IV;protein_id=EGT81119.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6097 7009 . + . ID=id-GGE_1305;Note=HMMPanther:PTHR11076~family not named;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6100 7141 . + . ID=id-GGE_1305-2;Dbxref=InterPro:IPR022880;Note=HAMAP:MF_01113~dnapol_iv~dna polymerase iv;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6103 6790 . + . ID=id-GGE_1305-3;Note=superfamily:SSF56672~dna/rna polymerases;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6109 6634 . + . ID=id-GGE_1305-4;Dbxref=InterPro:IPR017963;Note=ProfileScan:PS50173~umuc~dna-repair protein%2C umuc-like;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6112 7096 . + . ID=id-GGE_1305-5;Note=specific~superfamily%3B label: PolY superfamily;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6118 6532 . + . ID=id-GGE_1305-6;Dbxref=InterPro:IPR001126,PFAM:PF00817;Note=ims~dna-repair protein%2C umuc-like;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6124 7120 . + . ID=id-GGE_1305-7;Note=multi-dom%3B label: PRK02406;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6295 6385 . + . ID=id-GGE_1305-8;Note=Gene3D:3.30.70.270;gbkey=misc_feature;locus_tag=GGE_1305 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6154 6877 . - . ID=id-AFQR01000022.1:6154..6877;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6184 6592 . - . ID=id-AFQR01000022.1:6184..6592;Dbxref=PFAM:PF11798;Note=ims_hhh;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6286 6592 . - . ID=id-AFQR01000022.1:6286..6592;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6337 6736 . - . ID=id-AFQR01000022.1:6337..6736;Dbxref=InterPro:IPR017961,PFAM:PF11799;Note=ims_c~dna polymerase%2C y-family%2C little finger domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6424 6820 . - . ID=id-AFQR01000022.1:6424..6820;Dbxref=InterPro:IPR017961;Note=superfamily:SSF100879~lesion bypass dna polymerase (y-family)%2C little finger domain~dna polymerase%2C y-family%2C little finger domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 6436 6808 . - . ID=id-AFQR01000022.1:6436..6808;Dbxref=InterPro:IPR017962;Note=Gene3D:3.30.1490.100~dna polymerase iv/dinbue%2C little finger domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 7188 7724 . + . ID=gene-GGE_1306;Name=GGE_1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1306 GCA_000222085.2|AFQR01000022.1 Genbank CDS 7188 7724 . + 0 ID=cds-EGT81120.1;Parent=gene-GGE_1306;Dbxref=GeneID:1175896,InterPro:IPR007411,PFAM:PF04315,NCBI_GP:EGT81120.1;Name=EGT81120.1;Note=HI_1563;gbkey=CDS;locus_tag=GGE_1306;product=hypothetical protein;protein_id=EGT81120.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7188 7722 . + . ID=id-GGE_1306;Note=superfamily%3B label: DUF462 superfamily;gbkey=misc_feature;locus_tag=GGE_1306 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7221 7680 . + . ID=id-GGE_1306-2;Dbxref=InterPro:IPR007411,PFAM:PF04315;Note=duf462~protein of unknown function duf462;gbkey=misc_feature;locus_tag=GGE_1306 GCA_000222085.2|AFQR01000022.1 Genbank gene 7815 8900 . + . ID=gene-GGE_1307;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank CDS 7815 8900 . + 0 ID=cds-EGT81121.1;Parent=gene-GGE_1307;Dbxref=GeneID:61252075,InterPro:IPR000352,InterPro:IPR004373,InterPro:IPR005139,PFAM:PF00472,PFAM:PF03462,TIGRFAM:TIGR00019,NCBI_GP:EGT81121.1;Name=EGT81121.1;Ontology_term=GO:0006415,GO:0005737,GO:0016149,GO:0003747;gbkey=CDS;gene=prfA;go_component=cytoplasm|0005737||;go_function=translation release factor activity codon specific|0016149||,translation release factor activity|0003747||;go_process=translational termination|0006415||;locus_tag=GGE_1307;product=Peptide chain release factor 1;protein_id=EGT81121.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7815 8898 . + . ID=id-GGE_1307;Note=HMMPanther:PTHR11075:SF9~peptide chain release factor 1~HMMPanther:PTHR11075~family not named;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7815 8895 . + . ID=id-GGE_1307-2;Dbxref=InterPro:IPR004373,TIGRFAM:TIGR00019;Note=prfa: peptide chain release factor~peptide chain release factor 1;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7824 8886 . + . ID=id-GGE_1307-3;Note=multi-dom%3B label: prfA;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7824 7902 . + . ID=id-GGE_1307-4;Note=coiled-coil;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7833 8874 . + . ID=id-GGE_1307-5;Dbxref=InterPro:IPR004373;Note=HAMAP:MF_00093~rel_fac_1~peptide chain release factor 1;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7902 8805 . + . ID=id-GGE_1307-6;Note=superfamily:SSF75620~release factor;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8010 8160 . + . ID=id-GGE_1307-7;Note=superfamily%3B label: RF-1 superfamily;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8025 8145 . + . ID=id-GGE_1307-8;Dbxref=InterPro:IPR005139,PFAM:PF03462;Note=pcrf~peptide chain release factor;gbkey=misc_feature;gene=prfA;locus_tag=GGE_1307 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7848 8658 . - . ID=id-AFQR01000022.1:7848..8658;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7866 8502 . - . ID=id-AFQR01000022.1:7866..8502;Dbxref=InterPro:IPR000352;Note=PatternScan:PS00745~rf_prok_i~peptide chain release factor class i/class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7878 8061 . - . ID=id-AFQR01000022.1:7878..8061;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7881 8631 . - . ID=id-AFQR01000022.1:7881..8631;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 7881 8043 . - . ID=id-AFQR01000022.1:7881..8043;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8046 8457 . - . ID=id-AFQR01000022.1:8046..8457;Note=Gene3D:3.30.160.200;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8148 8451 . - . ID=id-AFQR01000022.1:8148..8451;Dbxref=InterPro:IPR000352,PFAM:PF00472;Note=rf-1~peptide chain release factor class i/class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8157 8442 . - . ID=id-AFQR01000022.1:8157..8442;Note=superfamily%3B label: RF-1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 8923 9393 . + . ID=gene-GGE_1308;Name=GGE_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1308 GCA_000222085.2|AFQR01000022.1 Genbank CDS 8923 9393 . + 0 ID=cds-EGT81122.1;Parent=gene-GGE_1308;Dbxref=GeneID:1175894,InterPro:IPR010432,PFAM:PF06271,NCBI_GP:EGT81122.1;Name=EGT81122.1;Note=HI_1560;gbkey=CDS;locus_tag=GGE_1308;product=putative rdd;protein_id=EGT81122.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9022 9271 . + . ID=id-GGE_1308;Dbxref=InterPro:IPR010432,PFAM:PF06271;Note=superfamily~rdd~rdd%3B label: RDD superfamily;gbkey=misc_feature;locus_tag=GGE_1308 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8992 9262 . - . ID=id-AFQR01000022.1:8992..9262;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 8992 9064 . - . ID=id-AFQR01000022.1:8992..9064;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 9393 10271 . + . ID=gene-GGE_1309;Name=hemK;gbkey=Gene;gene=hemK;gene_biotype=protein_coding;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank CDS 9393 10271 . + 0 ID=cds-EGT81123.1;Parent=gene-GGE_1309;Dbxref=GeneID:1170230,InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR007848,InterPro:IPR019874,PFAM:PF05175,TIGRFAM:TIGR00536,TIGRFAM:TIGR03534,NCBI_GP:EGT81123.1;Name=EGT81123.1;Ontology_term=GO:0032259,GO:0006479,GO:0008168,GO:0003676,GO:0008276;gbkey=CDS;gene=hemK;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,protein methyltransferase activity|0008276||;go_process=methylation|0032259||,protein methylation|0006479||;locus_tag=GGE_1309;product=Protein methyltransferase hemK;protein_id=EGT81123.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9393 10269 . + . ID=id-GGE_1309;Dbxref=InterPro:IPR004556,TIGRFAM:TIGR00536;Note=hemk_fam: methyltransferase%2C hemk family~modification methylase hemk;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9393 10263 . + . ID=id-GGE_1309-2;Note=multi-dom%3B label: PRK09328;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9399 10254 . + . ID=id-GGE_1309-3;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9432 9567 . + . ID=id-GGE_1309-4;Note=Gene3D:1.10.8.10;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9453 10203 . + . ID=id-GGE_1309-5;Note=HMMPanther:PTHR18895:SF7~hemk methyltransferase family member~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9471 10179 . + . ID=id-GGE_1309-6;Dbxref=InterPro:IPR019874,TIGRFAM:TIGR03534;Note=rf_mod_prmc: protein-(glutamine-n5) methy~protein-(glutamine-n5) methyltransferase%2C release factor-specific;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9548 9557 . + . ID=id-GGE_1309-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9558 9993 . + . ID=id-GGE_1309-8;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9606 9987 . + . ID=id-GGE_1309-9;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9705 9837 . + . ID=id-GGE_1309-10;Dbxref=InterPro:IPR007848,PFAM:PF05175;Note=mts~methyltransferase small;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 10169 10178 . + . ID=id-GGE_1309-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hemK;locus_tag=GGE_1309 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9414 9978 . - . ID=id-AFQR01000022.1:9414..9978;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9453 9762 . - . ID=id-AFQR01000022.1:9453..9762;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9566 9575 . - . ID=id-AFQR01000022.1:9566..9575;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 9742 9751 . - . ID=id-AFQR01000022.1:9742..9751;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 10271 11074 . + . ID=gene-GGE_1310;Name=GGE_1310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1310 GCA_000222085.2|AFQR01000022.1 Genbank CDS 10271 11074 . + 0 ID=cds-EGT81124.1;Parent=gene-GGE_1310;Dbxref=NCBI_GP:EGT81124.1;Name=EGT81124.1;Note=HI_1558;gbkey=CDS;locus_tag=GGE_1310;product=UPF0162 protein;protein_id=EGT81124.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 10271 11072 . + . ID=id-GGE_1310;Note=multi-dom%3B label: COG2912;gbkey=misc_feature;locus_tag=GGE_1310 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 10325 10976 . + . ID=id-GGE_1310-2;Note=superfamily%3B label: PRK10941 superfamily;gbkey=misc_feature;locus_tag=GGE_1310 GCA_000222085.2|AFQR01000022.1 Genbank gene 11089 11943 . + . ID=gene-GGE_1311;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank CDS 11089 11943 . + 0 ID=cds-EGT81125.1;Parent=gene-GGE_1311;Dbxref=GeneID:81335648,InterPro:IPR006218,InterPro:IPR006269,InterPro:IPR013785,PFAM:PF00793,TIGRFAM:TIGR01362,NCBI_GP:EGT81125.1;Name=EGT81125.1;Ontology_term=GO:0009058,GO:0008152,GO:0005737,GO:0008676,GO:0003824;gbkey=CDS;gene=kdsA;go_component=cytoplasm|0005737||;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||,catalytic activity|0003824||;go_process=biosynthetic process|0009058||,metabolic process|0008152||;locus_tag=GGE_1311;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=EGT81125.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11089 11941 . + . ID=id-GGE_1311;Dbxref=InterPro:IPR006269;Note=HMMPanther:PTHR21057:SF2~2-dehydro-3-deoxyphosphooctonate aldolase~3-deoxy-8-phosphooctulonate synthase~HMMPanther:PTHR21057~family not named;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11095 11932 . + . ID=id-GGE_1311-2;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11116 11887 . + . ID=id-GGE_1311-3;Note=superfamily%3B label: NeuB superfamily;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11119 11890 . + . ID=id-GGE_1311-4;Note=multi-dom%3B label: DAHP_synth_1;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11119 11887 . + . ID=id-GGE_1311-5;Dbxref=InterPro:IPR006218,PFAM:PF00793;Note=dahp_synth_1~dahp synthetase i/kdsa;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11128 11884 . + . ID=id-GGE_1311-6;Dbxref=InterPro:IPR006269;Note=HAMAP:MF_00056~kdo8p_synth~3-deoxy-8-phosphooctulonate synthase;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11137 11890 . + . ID=id-GGE_1311-7;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11140 11869 . + . ID=id-GGE_1311-8;Dbxref=InterPro:IPR006269,TIGRFAM:TIGR01362;Note=kdo8p_synth: 3-deoxy-8-phosphooctulonate~3-deoxy-8-phosphooctulonate synthase;gbkey=misc_feature;gene=kdsA;locus_tag=GGE_1311 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11958 11967 . + . ID=id-AFQR01000022.1:11958..11967;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 11976 11985 . - . ID=id-AFQR01000022.1:11976..11985;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 12006 12953 . + . ID=gene-GGE_1312;Name=GGE_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank CDS 12006 12953 . + 0 ID=cds-EGT81126.1;Parent=gene-GGE_1312;Dbxref=GeneID:1175893,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,PFAM:PF00389,PFAM:PF02826,NCBI_GP:EGT81126.1;Name=EGT81126.1;Note=HI_1556;Ontology_term=GO:0008152,GO:0051287,GO:0005488,GO:0003824,GO:0048037,GO:0016616;gbkey=CDS;go_function=NAD or NADH binding|0051287||,binding|0005488||,catalytic activity|0003824||,cofactor binding|0048037||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||;go_process=metabolic process|0008152||;locus_tag=GGE_1312;product=Putative 2-hydroxyacid dehydrogenase;protein_id=EGT81126.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12006 12939 . + . ID=id-GGE_1312;Note=multi-dom%3B label: PRK06932;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12006 12408 . + . ID=id-GGE_1312-2;Note=superfamily:SSF52283~formate/glycerate dehydrogenase catalytic domain-like;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12006 12348 . + . ID=id-GGE_1312-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12087 12858 . + . ID=id-GGE_1312-4;Note=HMMPanther:PTHR10996:SF46~glycerate dehydrogenase~HMMPanther:PTHR10996~2-hydroxyacid dehydrogenase-related;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12099 12849 . + . ID=id-GGE_1312-5;Dbxref=InterPro:IPR006139,PFAM:PF00389;Note=2-hacid_dh~d-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12297 12582 . + . ID=id-GGE_1312-6;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12324 12552 . + . ID=id-GGE_1312-7;Dbxref=InterPro:IPR006140,PFAM:PF02826;Note=superfamily~2-hacid_dh_c~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12351 12528 . + . ID=id-GGE_1312-8;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_1312 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12057 12672 . - . ID=id-AFQR01000022.1:12057..12672;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00671~d_2_hydroxyacid_dh_3~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12075 12585 . - . ID=id-AFQR01000022.1:12075..12585;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00670~d_2_hydroxyacid_dh_2~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 12953 14134 . + . ID=gene-GGE_1313;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=GGE_1313 GCA_000222085.2|AFQR01000022.1 Genbank CDS 12953 14134 . + 0 ID=cds-EGT81127.1;Parent=gene-GGE_1313;Dbxref=GeneID:1175892,InterPro:IPR003838,InterPro:IPR011925,PFAM:PF02687,TIGRFAM:TIGR02212,NCBI_GP:EGT81127.1;Name=EGT81127.1;Ontology_term=GO:0006810,GO:0009276,GO:0016021,GO:0016020;gbkey=CDS;gene=lolC;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_process=transport|0006810||;locus_tag=GGE_1313;product=Lipoprotein-releasing system transmembrane protein lolC;protein_id=EGT81127.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12953 14132 . + . ID=id-GGE_1313;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature;gene=lolC;locus_tag=GGE_1313 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12965 14123 . + . ID=id-GGE_1313-2;Dbxref=InterPro:IPR011925,TIGRFAM:TIGR02212;Note=multi-dom~lolce: lipoprotein releasing system%2C transme~lipoprotein releasing system%2C transmembrane protein%2C lolc/e family%3B label: lolCE;gbkey=misc_feature;gene=lolC;locus_tag=GGE_1313 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12983 14051 . - . ID=id-AFQR01000022.1:12983..14051;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12989 13895 . - . ID=id-AFQR01000022.1:12989..13895;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 12998 13748 . - . ID=id-AFQR01000022.1:12998..13748;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13022 14015 . - . ID=id-AFQR01000022.1:13022..14015;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13022 13877 . - . ID=id-AFQR01000022.1:13022..13877;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13022 13748 . - . ID=id-AFQR01000022.1:13022..13748;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13022 13028 . - . ID=id-AFQR01000022.1:13022..13028;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13200 13209 . - . ID=id-AFQR01000022.1:13200..13209;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 13424 13643 . - . ID=id-AFQR01000022.1:13424..13643;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 14154 15446 . + . ID=gene-GGE_1314;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank CDS 14154 15446 . + 0 ID=cds-EGT81128.1;Parent=gene-GGE_1314;Dbxref=GeneID:1168662,InterPro:IPR005814,InterPro:IPR005815,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00202,TIGRFAM:TIGR00508,NCBI_GP:EGT81128.1;Name=EGT81128.1;Ontology_term=GO:0009102,GO:0004015,GO:0003824,GO:0030170,GO:0008483;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,transaminase activity|0008483||;go_process=biotin biosynthetic process|0009102||;locus_tag=GGE_1314;product=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=EGT81128.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14154 15435 . + . ID=id-GGE_1314;Dbxref=InterPro:IPR005815,TIGRFAM:TIGR00508;Note=bioa: adenosylmethionine-8-amino-7-oxononano~adenosylmethionine--8-amino-7-oxononanoate aminotransferase;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14160 15441 . + . ID=id-GGE_1314-2;Dbxref=InterPro:IPR005814,InterPro:IPR005815;Note=multi-dom~HMMPanther:PTHR11986:SF8~adenosylmethionine-8-amino-7-oxononanoate aminotransferase~adenosylmethionine--8-amino-7-oxononanoate aminotransferase~HMMPanther:PTHR11986~family not named~aminotransferase class-iii%3B label: PRK06173;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14163 15426 . + . ID=id-GGE_1314-3;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14175 15384 . + . ID=id-GGE_1314-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14247 15186 . + . ID=id-GGE_1314-5;Dbxref=InterPro:IPR005814,PFAM:PF00202;Note=aminotran_3~aminotransferase class-iii;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14346 14958 . + . ID=id-GGE_1314-6;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15273 15282 . + . ID=id-GGE_1314-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=bioA;locus_tag=GGE_1314 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14190 15018 . - . ID=id-AFQR01000022.1:14190..15018;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14268 14889 . - . ID=id-AFQR01000022.1:14268..14889;Dbxref=InterPro:IPR005814;Note=PatternScan:PS00600~aa_transfer_class_3~aminotransferase class-iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 14430 15156 . - . ID=id-AFQR01000022.1:14430..15156;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 15455 16597 . + . ID=gene-GGE_1315;Name=GGE_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank CDS 15455 16597 . + 0 ID=cds-EGT81129.1;Parent=gene-GGE_1315;Dbxref=GeneID:254813390,InterPro:IPR001917,InterPro:IPR004723,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,TIGRFAM:TIGR00858,NCBI_GP:EGT81129.1;Name=EGT81129.1;Note=CGSHiEE_05345;Ontology_term=GO:0009058,GO:0009102,GO:0008152,GO:0008710,GO:0003824,GO:0030170,GO:0016769,GO:0016740;gbkey=CDS;go_function=8-amino-7-oxononanoate synthase activity|0008710||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,transferase activity transferring nitrogenous groups|0016769||,transferase activity|0016740||;go_process=biosynthetic process|0009058||,biotin biosynthetic process|0009102||,metabolic process|0008152||;locus_tag=GGE_1315;product=Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase;protein_id=EGT81129.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15455 16595 . + . ID=id-GGE_1315;Dbxref=InterPro:IPR015424;Note=multi-dom~superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain%3B label: BioF;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15503 16550 . + . ID=id-GGE_1315-2;Dbxref=InterPro:IPR004723,TIGRFAM:TIGR00858;Note=biof: 8-amino-7-oxononanoate synthase~8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme a ligase;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15533 16499 . + . ID=id-GGE_1315-3;Note=HMMPanther:PTHR13693:SF4~8-amino-7-oxononanoate synthase~HMMPanther:PTHR13693~family not named;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15560 16493 . + . ID=id-GGE_1315-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15563 16484 . + . ID=id-GGE_1315-5;Dbxref=InterPro:IPR004839,PFAM:PF00155;Note=aminotran_1_2~aminotransferase%2C class i/classii;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15644 16082 . + . ID=id-GGE_1315-6;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_1315 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15485 16163 . - . ID=id-AFQR01000022.1:15485..16163;Dbxref=InterPro:IPR001917;Note=PatternScan:PS00599~aa_transfer_class_2~aminotransferase%2C class-ii%2C pyridoxal-phosphate binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15782 16271 . - . ID=id-AFQR01000022.1:15782..16271;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 15956 15965 . - . ID=id-AFQR01000022.1:15956..15965;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 16607 17254 . + . ID=gene-GGE_1316;Name=GGE_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1316 GCA_000222085.2|AFQR01000022.1 Genbank CDS 16607 17254 . + 0 ID=cds-EGT81130.1;Parent=gene-GGE_1316;Dbxref=InterPro:IPR007398,PFAM:PF04301,NCBI_GP:EGT81130.1;Name=EGT81130.1;Note=HI_1552;gbkey=CDS;locus_tag=GGE_1316;product=hypothetical protein;protein_id=EGT81130.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 16607 17243 . + . ID=id-GGE_1316;Note=superfamily%3B label: DUF452 superfamily;gbkey=misc_feature;locus_tag=GGE_1316 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 16613 17240 . + . ID=id-GGE_1316-2;Dbxref=InterPro:IPR007398,PFAM:PF04301;Note=duf452~protein of unknown function duf452;gbkey=misc_feature;locus_tag=GGE_1316 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17050 17059 . - . ID=id-AFQR01000022.1:17050..17059;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 17242 18033 . + . ID=gene-GGE_1317;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank CDS 17242 18033 . + 0 ID=cds-EGT81131.1;Parent=gene-GGE_1317;Dbxref=InterPro:IPR011814,InterPro:IPR013216,PFAM:PF08241,TIGRFAM:TIGR02072,NCBI_GP:EGT81131.1;Name=EGT81131.1;Ontology_term=GO:0009102,GO:0008152,GO:0008168;gbkey=CDS;gene=bioC;go_function=methyltransferase activity|0008168||;go_process=biotin biosynthetic process|0009102||,metabolic process|0008152||;locus_tag=GGE_1317;product=Putative biotin synthesis protein BioC;protein_id=EGT81131.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17284 17977 . + . ID=id-GGE_1317;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17299 17962 . + . ID=id-GGE_1317-2;Dbxref=InterPro:IPR011814,TIGRFAM:TIGR02072;Note=bioc: biotin biosynthesis protein bioc~biotin biosynthesis protein bioc;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17302 17872 . + . ID=id-GGE_1317-3;Note=HMMPanther:PTHR10108:SF262~putative biotin synthesis protein bioc~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17314 17947 . + . ID=id-GGE_1317-4;Note=multi-dom%3B label: BioC;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17377 17881 . + . ID=id-GGE_1317-5;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17413 17533 . + . ID=id-GGE_1317-6;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17416 17518 . + . ID=id-GGE_1317-7;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17970 17979 . + . ID=id-GGE_1317-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=bioC;locus_tag=GGE_1317 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 17275 17281 . - . ID=id-AFQR01000022.1:17275..17281;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 18046 18687 . + . ID=gene-GGE_1318;Name=GGE_1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank CDS 18046 18687 . + 0 ID=cds-EGT81132.1;Parent=gene-GGE_1318;Dbxref=InterPro:IPR002586,InterPro:IPR004472,PFAM:PF01656,PIR:PIRSF006755,TIGRFAM:TIGR00347,NCBI_GP:EGT81132.1;Name=EGT81132.1;Note=bioD-B;Ontology_term=GO:0009102,GO:0005524,GO:0004141,GO:0000287;gbkey=CDS;go_function=ATP binding|0005524||,dethiobiotin synthase activity|0004141||,magnesium ion binding|0000287||;go_process=biotin biosynthetic process|0009102||;locus_tag=GGE_1318;product=Putative dethiobiotin synthetase 2;protein_id=EGT81132.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18046 18685 . + . ID=id-GGE_1318;Dbxref=InterPro:IPR004472,PIR:PIRSF006755;Note=dethiobiotin synthetase~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18046 18631 . + . ID=id-GGE_1318-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18046 18583 . + . ID=id-GGE_1318-3;Note=HMMPanther:PTHR21343~family not named;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18055 18676 . + . ID=id-GGE_1318-4;Dbxref=InterPro:IPR004472;Note=HAMAP:MF_00336~biod~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18055 18631 . + . ID=id-GGE_1318-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18055 18166 . + . ID=id-GGE_1318-6;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18061 18592 . + . ID=id-GGE_1318-7;Dbxref=InterPro:IPR002586,PFAM:PF01656;Note=cbia~cobyrinic acid a%2Cc-diamide synthase;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18064 18556 . + . ID=id-GGE_1318-8;Dbxref=InterPro:IPR004472,TIGRFAM:TIGR00347;Note=biod: dethiobiotin synthase~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1318 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18280 18367 . - . ID=id-AFQR01000022.1:18280..18367;Note=specific~superfamily%3B label: DTBS;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18348 18357 . - . ID=id-AFQR01000022.1:18348..18357;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18743 18752 . + . ID=id-AFQR01000022.1:18743..18752;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 18769 19452 . + . ID=gene-GGE_1319;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank CDS 18769 19452 . + 0 ID=cds-EGT81133.1;Parent=gene-GGE_1319;Dbxref=GeneID:1175552,InterPro:IPR003439,InterPro:IPR011924,InterPro:IPR015854,InterPro:IPR017871,PFAM:PF00005,TIGRFAM:TIGR02211,NCBI_GP:EGT81133.1;Name=EGT81133.1;Ontology_term=GO:0042953,GO:0006810,GO:0016020,GO:0005524,GO:0016887,GO:0042954;gbkey=CDS;gene=lolD;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,lipoprotein transporter activity|0042954||;go_process=lipoprotein transport|0042953||,transport|0006810||;locus_tag=GGE_1319;product=Lipoprotein-releasing system ATP-binding protein LolD;protein_id=EGT81133.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18781 19435 . + . ID=id-GGE_1319;Note=HMMPanther:PTHR24220:SF165~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18784 19432 . + . ID=id-GGE_1319-2;Dbxref=InterPro:IPR011924,TIGRFAM:TIGR02211;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase~lold_lipo_ex: lipoprotein releasing syst~lipoprotein releasing system%2C atp-binding protein%3B label: LolD_lipo_ex;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18784 19426 . + . ID=id-GGE_1319-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18787 19435 . + . ID=id-GGE_1319-4;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18787 19417 . + . ID=id-GGE_1319-5;Note=specific~superfamily%3B label: ABC_MJ0796_Lo1CDE_FtsE;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18916 19144 . + . ID=id-GGE_1319-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=lolD;locus_tag=GGE_1319 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18814 19207 . - . ID=id-AFQR01000022.1:18814..19207;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 18865 19021 . - . ID=id-AFQR01000022.1:18865..19021;Dbxref=InterPro:IPR015854;Note=ProfileScan:PS51244~lold~abc transporter%2C lipoprotein release%2C lold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 19452 20702 . + . ID=gene-GGE_1320;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=GGE_1320 GCA_000222085.2|AFQR01000022.1 Genbank CDS 19452 20702 . + 0 ID=cds-EGT81134.1;Parent=gene-GGE_1320;Dbxref=GeneID:1175890,InterPro:IPR003838,InterPro:IPR011925,InterPro:IPR011926,PFAM:PF02687,TIGRFAM:TIGR02212,TIGRFAM:TIGR02213,NCBI_GP:EGT81134.1;Name=EGT81134.1;Ontology_term=GO:0006810,GO:0009276,GO:0016021,GO:0016020;gbkey=CDS;gene=lolE;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_process=transport|0006810||;locus_tag=GGE_1320;product=Lipoprotein-releasing system transmembrane protein lolC;protein_id=EGT81134.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19452 20700 . + . ID=id-GGE_1320;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature;gene=lolE;locus_tag=GGE_1320 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19458 20697 . + . ID=id-GGE_1320-2;Dbxref=InterPro:IPR011925,InterPro:IPR011926,TIGRFAM:TIGR02212,TIGRFAM:TIGR02213;Note=multi-dom~lolce: lipoprotein releasing system%2C tra~lipoprotein releasing system%2C transmembrane protein%2C lolc/e family~lole_release: lipoprotein releasing syst~lipoprotein releasing system%2C transmembrane protein lole%3B label: lolCE;gbkey=misc_feature;gene=lolE;locus_tag=GGE_1320 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19512 19521 . + . ID=id-GGE_1320-3;Note=transmembrane_regions;gbkey=misc_feature;gene=lolE;locus_tag=GGE_1320 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19482 20454 . - . ID=id-AFQR01000022.1:19482..20454;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19521 20592 . - . ID=id-AFQR01000022.1:19521..20592;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19521 20583 . - . ID=id-AFQR01000022.1:19521..20583;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19521 20451 . - . ID=id-AFQR01000022.1:19521..20451;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19521 20364 . - . ID=id-AFQR01000022.1:19521..20364;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 19521 20268 . - . ID=id-AFQR01000022.1:19521..20268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20007 20127 . - . ID=id-AFQR01000022.1:20007..20127;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 20921 22009 . + . ID=gene-GGE_1321;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank CDS 20921 22009 . + 0 ID=cds-EGT81135.1;Parent=gene-GGE_1321;Dbxref=GeneID:1168513,InterPro:IPR006218,InterPro:IPR006219,InterPro:IPR013785,PFAM:PF00793,PIR:PIRSF001361,TIGRFAM:TIGR00034,NCBI_GP:EGT81135.1;Name=EGT81135.1;Ontology_term=GO:0009073,GO:0009058,GO:0008152,GO:0003849,GO:0003824;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||,catalytic activity|0003824||;go_process=aromatic amino acid family biosynthetic process|0009073||,biosynthetic process|0009058||,metabolic process|0008152||;locus_tag=GGE_1321;product=Phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=EGT81135.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20921 22004 . + . ID=id-GGE_1321;Dbxref=InterPro:IPR006219,PIR:PIRSF001361;Note=3-deoxy-7-phosphoheptulonate synthase~dhap synthase%2C class 1;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20957 21974 . + . ID=id-GGE_1321-2;Dbxref=InterPro:IPR006219;Note=HMMPanther:PTHR21225~family not named~dhap synthase%2C class 1;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20957 21962 . + . ID=id-GGE_1321-3;Note=superfamily%3B label: NeuB superfamily;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20960 21956 . + . ID=id-GGE_1321-4;Dbxref=InterPro:IPR006219,TIGRFAM:TIGR00034;Note=arofgh: 3-deoxy-7-phosphoheptulonate synthas~dhap synthase%2C class 1;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20963 21953 . + . ID=id-GGE_1321-5;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 20969 21953 . + . ID=id-GGE_1321-6;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 21065 21818 . + . ID=id-GGE_1321-7;Dbxref=InterPro:IPR006218,PFAM:PF00793;Note=dahp_synth_1~dahp synthetase i/kdsa;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 21077 21809 . + . ID=id-GGE_1321-8;Note=multi-dom%3B label: DAHP_synth_1;gbkey=misc_feature;gene=aroG;locus_tag=GGE_1321 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22053 22062 . - . ID=id-AFQR01000022.1:22053..22062;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 22079 22519 . - . ID=gene-GGE_1322;Name=GGE_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1322 GCA_000222085.2|AFQR01000022.1 Genbank CDS 22079 22519 . - 0 ID=cds-EGT81136.1;Parent=gene-GGE_1322;Dbxref=GeneID:1175889,InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,NCBI_GP:EGT81136.1;Name=EGT81136.1;Note=HI_1546;gbkey=CDS;locus_tag=GGE_1322;product=putative peptidase S24/S26A/S26B;protein_id=EGT81136.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22133 22436 . - . ID=id-GGE_1322;Note=superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature;locus_tag=GGE_1322 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22166 22397 . - . ID=id-GGE_1322-2;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;locus_tag=GGE_1322 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22175 22394 . - . ID=id-GGE_1322-3;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature;locus_tag=GGE_1322 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22238 22265 . - . ID=id-GGE_1322-4;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature;locus_tag=GGE_1322 GCA_000222085.2|AFQR01000022.1 Genbank gene 22808 24052 . + . ID=gene-GGE_1323;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank CDS 22808 24052 . + 0 ID=cds-EGT81137.1;Parent=gene-GGE_1323;Dbxref=GeneID:81335636,InterPro:IPR001991,InterPro:IPR023025,PFAM:PF00375,NCBI_GP:EGT81137.1;Name=EGT81137.1;Ontology_term=GO:0006835,GO:0016020,GO:0017153;gbkey=CDS;gene=sstT;go_component=membrane|0016020||;go_function=sodium:dicarboxylate symporter activity|0017153||;go_process=dicarboxylic acid transport|0006835||;locus_tag=GGE_1323;product=Serine/threonine transporter sstT;protein_id=EGT81137.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22808 24035 . + . ID=id-GGE_1323;Note=superfamily%3B label: SDF superfamily;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22817 24038 . + . ID=id-GGE_1323-2;Dbxref=InterPro:IPR023025;Note=HAMAP:MF_01582~ser_thr_transp_sstt~serine/threonine transporter sstt;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22853 23990 . + . ID=id-GGE_1323-3;Note=superfamily:SSF118215~proton glutamate symport protein;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22853 23978 . + . ID=id-GGE_1323-4;Dbxref=InterPro:IPR001991,PFAM:PF00375;Note=sdf~sodium dicarboxylate symporter;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22853 22871 . + . ID=id-GGE_1323-5;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22871 22877 . + . ID=id-GGE_1323-6;Note=transmembrane_regions;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22964 23897 . + . ID=id-GGE_1323-7;Dbxref=InterPro:IPR001991;Note=HMMPanther:PTHR11958~family not named~sodium dicarboxylate symporter;gbkey=misc_feature;gene=sstT;locus_tag=GGE_1323 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22844 23732 . - . ID=id-AFQR01000022.1:22844..23732;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22850 23102 . - . ID=id-AFQR01000022.1:22850..23102;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22862 23825 . - . ID=id-AFQR01000022.1:22862..23825;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22862 23375 . - . ID=id-AFQR01000022.1:22862..23375;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22868 23798 . - . ID=id-AFQR01000022.1:22868..23798;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22868 23387 . - . ID=id-AFQR01000022.1:22868..23387;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22868 22982 . - . ID=id-AFQR01000022.1:22868..22982;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22877 23813 . - . ID=id-AFQR01000022.1:22877..23813;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22877 23717 . - . ID=id-AFQR01000022.1:22877..23717;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22877 23471 . - . ID=id-AFQR01000022.1:22877..23471;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22877 23246 . - . ID=id-AFQR01000022.1:22877..23246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22877 23075 . - . ID=id-AFQR01000022.1:22877..23075;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22886 22955 . - . ID=id-AFQR01000022.1:22886..22955;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 22889 23693 . - . ID=id-AFQR01000022.1:22889..23693;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 24173 24781 . + . ID=gene-GGE_1324;Name=GGE_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1324 GCA_000222085.2|AFQR01000022.1 Genbank CDS 24173 24781 . + 0 ID=cds-EGT81138.1;Parent=gene-GGE_1324;Dbxref=GeneID:1175888,InterPro:IPR003680,PFAM:PF02525,NCBI_GP:EGT81138.1;Name=EGT81138.1;Note=HI_1544;Ontology_term=GO:0050662,GO:0009055,GO:0016491;gbkey=CDS;go_function=coenzyme binding|0050662||,electron carrier activity|0009055||,oxidoreductase activity|0016491||;locus_tag=GGE_1324;product=putative flavodoxin-like fold-containing protein;protein_id=EGT81138.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24173 24758 . + . ID=id-GGE_1324;Note=superfamily%3B label: FMN_red superfamily;gbkey=misc_feature;locus_tag=GGE_1324 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24173 24749 . + . ID=id-GGE_1324-2;Note=Gene3D:3.40.50.360~superfamily:SSF52218~flavoproteins;gbkey=misc_feature;locus_tag=GGE_1324 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24173 24725 . + . ID=id-GGE_1324-3;Dbxref=InterPro:IPR003680,PFAM:PF02525;Note=HMMPanther:PTHR10204:SF0~nad(p)h dehydrogenase-related~HMMPanther:PTHR10204~nad(p)h oxidoreductase-related~flavodoxin_2~flavodoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1324 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24754 24763 . - . ID=id-AFQR01000022.1:24754..24763;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 24781 25335 . + . ID=gene-GGE_1325;Name=GGE_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1325 GCA_000222085.2|AFQR01000022.1 Genbank CDS 24781 25335 . + 0 ID=cds-EGT81139.1;Parent=gene-GGE_1325;Dbxref=GeneID:1175887,InterPro:IPR009073,NCBI_GP:EGT81139.1;Name=EGT81139.1;Note=HI_1543;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||;locus_tag=GGE_1325;product=putative torD-like protein;protein_id=EGT81139.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24781 25333 . + . ID=id-GGE_1325;Note=superfamily%3B label: Nitrate_red_del superfamily;gbkey=misc_feature;locus_tag=GGE_1325 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 24781 25330 . + . ID=id-GGE_1325-2;Note=superfamily:SSF89155~tord-like;gbkey=misc_feature;locus_tag=GGE_1325 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25000 25111 . - . ID=id-AFQR01000022.1:25000..25111;Dbxref=InterPro:IPR009073;Note=Gene3D:1.20.1280.20~heat shock cognate protein b oligomerisation;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 25383 25937 . - . ID=gene-GGE_1326;Name=GGE_1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank CDS 25383 25937 . - 0 ID=cds-EGT81140.1;Parent=gene-GGE_1326;Dbxref=GeneID:1175772,InterPro:IPR000415,PFAM:PF00881,NCBI_GP:EGT81140.1;Name=EGT81140.1;Note=HI_1542;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||;locus_tag=GGE_1326;product=Putative NADPH nitroreductase;protein_id=EGT81140.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25383 25932 . - . ID=id-GGE_1326;Dbxref=InterPro:IPR000415;Note=superfamily:SSF55469~fmn-dependent nitroreductase-like~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25383 25929 . - . ID=id-GGE_1326-2;Dbxref=InterPro:IPR000415;Note=Gene3D:3.40.109.10~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25383 25872 . - . ID=id-GGE_1326-3;Note=HMMPanther:PTHR23026:SF67~subfamily not named~HMMPanther:PTHR23026~family not named;gbkey=misc_feature;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25395 25863 . - . ID=id-GGE_1326-4;Note=specific~superfamily%3B label: Arsenite_oxidase;gbkey=misc_feature;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25407 25848 . - . ID=id-GGE_1326-5;Dbxref=InterPro:IPR000415,PFAM:PF00881;Note=nitroreductase~nitroreductase-like;gbkey=misc_feature;locus_tag=GGE_1326 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 25956 25965 . + . ID=id-AFQR01000022.1:25956..25965;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 26034 27881 . + . ID=gene-GGE_1327;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank CDS 26034 27881 . + 0 ID=cds-EGT81141.1;Parent=gene-GGE_1327;Dbxref=GeneID:1174428,InterPro:IPR002142,InterPro:IPR004634,InterPro:IPR004635,InterPro:IPR023562,PFAM:PF01343,PIR:PIRSF001217,TIGRFAM:TIGR00705,TIGRFAM:TIGR00706,NCBI_GP:EGT81141.1;Name=EGT81141.1;Ontology_term=GO:0006508,GO:0006465,GO:0016021,GO:0008233;gbkey=CDS;gene=sppA;go_component=integral to membrane|0016021||;go_function=peptidase activity|0008233||;go_process=proteolysis|0006508||,signal peptide processing|0006465||;locus_tag=GGE_1327;product=Protease 4;protein_id=EGT81141.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26034 27879 . + . ID=id-GGE_1327;Dbxref=InterPro:IPR004634,PIR:PIRSF001217;Note=protease iv with duplicated peptidase family u7 domain~peptidase s49%2C protease iv;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26061 27828 . + . ID=id-GGE_1327-2;Dbxref=InterPro:IPR004634,TIGRFAM:TIGR00705;Note=multi-dom~sppa_67k: signal peptide peptidase sppa%2C 67k~peptidase s49%2C protease iv%3B label: SppA_67K;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26070 26103 . + . ID=id-GGE_1327-3;Note=transmembrane_regions;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26100 26811 . + . ID=id-GGE_1327-4;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26172 27621 . + . ID=id-GGE_1327-5;Dbxref=InterPro:IPR023562;Note=HMMPanther:PTHR10381:SF2~signal peptide peptidase sppa~HMMPanther:PTHR10381~atp-dependent clp protease proteolytic subunit~peptidase s14/s49;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26193 26745 . + . ID=id-GGE_1327-6;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26430 26502 . + . ID=id-GGE_1327-7;Dbxref=InterPro:IPR002142,PFAM:PF01343;Note=peptidase_s49~peptidase s49;gbkey=misc_feature;gene=sppA;locus_tag=GGE_1327 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26079 26088 . - . ID=id-AFQR01000022.1:26079..26088;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26271 27426 . - . ID=id-AFQR01000022.1:26271..27426;Note=Gene3D:3.90.226.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26325 26667 . - . ID=id-AFQR01000022.1:26325..26667;Note=Gene3D:3.90.226.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26484 27201 . - . ID=id-AFQR01000022.1:26484..27201;Dbxref=InterPro:IPR002142,PFAM:PF01343;Note=peptidase_s49~peptidase s49;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26667 27003 . - . ID=id-AFQR01000022.1:26667..27003;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26679 27003 . - . ID=id-AFQR01000022.1:26679..27003;Dbxref=InterPro:IPR004635,TIGRFAM:TIGR00706;Note=sppa_dom: signal peptide peptidase sppa%2C 36k~peptidase s49%2C sppa;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26712 26937 . - . ID=id-AFQR01000022.1:26712..26937;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 26894 26903 . - . ID=id-AFQR01000022.1:26894..26903;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 27919 28716 . - . ID=gene-GGE_1328;Name=licD;gbkey=Gene;gene=licD;gene_biotype=protein_coding;locus_tag=GGE_1328 GCA_000222085.2|AFQR01000022.1 Genbank CDS 27919 28716 . - 0 ID=cds-EGT81142.1;Parent=gene-GGE_1328;Dbxref=GeneID:7404391,InterPro:IPR007074,PFAM:PF04991,NCBI_GP:EGT81142.1;Name=EGT81142.1;gbkey=CDS;gene=licD;locus_tag=GGE_1328;product=Lipopolysaccharide cholinephosphotransferase licD;protein_id=EGT81142.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 27919 28716 . - . ID=id-GGE_1328;Note=VFDB hit~VFDB:VFG0329;gbkey=misc_feature;gene=licD;locus_tag=GGE_1328 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 27919 28675 . - . ID=id-GGE_1328-2;Note=superfamily%3B label: LicD superfamily;gbkey=misc_feature;gene=licD;locus_tag=GGE_1328 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 27991 28579 . - . ID=id-GGE_1328-3;Dbxref=InterPro:IPR007074,PFAM:PF04991;Note=licd~licd-like;gbkey=misc_feature;gene=licD;locus_tag=GGE_1328 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 27994 28012 . - . ID=id-GGE_1328-4;Note=HMMPanther:PTHR13627~family not named;gbkey=misc_feature;gene=licD;locus_tag=GGE_1328 GCA_000222085.2|AFQR01000022.1 Genbank gene 28716 29417 . - . ID=gene-GGE_1329;Name=licC;gbkey=Gene;gene=licC;gene_biotype=protein_coding;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank CDS 28716 29417 . - 0 ID=cds-EGT81143.1;Parent=gene-GGE_1329;Dbxref=InterPro:IPR005835,InterPro:IPR017189,PFAM:PF00483,PIR:PIRSF037382,NCBI_GP:EGT81143.1;Name=EGT81143.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;gene=licC;go_function=nucleotidyltransferase activity|0016779||;go_process=biosynthetic process|0009058||;locus_tag=GGE_1329;product=Protein licC;protein_id=EGT81143.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28716 29417 . - . ID=id-GGE_1329;Note=VFDB hit~VFDB:VFG0328;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28716 29415 . - . ID=id-GGE_1329-2;Dbxref=InterPro:IPR017189,PIR:PIRSF037382;Note=ctp:phosphocholine cytidylyltransferase involved in lps biosynthesis~ctp phosphocholine cytidylyltransferase;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28716 29400 . - . ID=id-GGE_1329-3;Note=Gene3D:3.90.550.10~superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28716 28899 . - . ID=id-GGE_1329-4;Note=HMMPanther:PTHR22572~family not named;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28725 29379 . - . ID=id-GGE_1329-5;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 28725 29049 . - . ID=id-GGE_1329-6;Dbxref=InterPro:IPR005835,PFAM:PF00483;Note=ntp_transferase~nucleotidyl transferase;gbkey=misc_feature;gene=licC;locus_tag=GGE_1329 GCA_000222085.2|AFQR01000022.1 Genbank gene 29414 30295 . - . ID=gene-GGE_1330;Name=licB;gbkey=Gene;gene=licB;gene_biotype=protein_coding;locus_tag=GGE_1330 GCA_000222085.2|AFQR01000022.1 Genbank CDS 29414 30295 . - 0 ID=cds-EGT81144.1;Parent=gene-GGE_1330;Dbxref=GeneID:3915746,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT81144.1;Name=EGT81144.1;Ontology_term=GO:0016020;gbkey=CDS;gene=licB;go_component=membrane|0016020||;locus_tag=GGE_1330;product=Protein licB;protein_id=EGT81144.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29414 30292 . - . ID=id-GGE_1330;Note=VFDB hit~VFDB:VFG0327;gbkey=misc_feature;gene=licB;locus_tag=GGE_1330 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29429 29468 . - . ID=id-GGE_1330-2;Note=transmembrane_regions;gbkey=misc_feature;gene=licB;locus_tag=GGE_1330 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29456 29789 . - . ID=id-GGE_1330-3;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;gene=licB;locus_tag=GGE_1330 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29531 29723 . - . ID=id-GGE_1330-4;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;gene=licB;locus_tag=GGE_1330 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29438 30227 . + . ID=id-AFQR01000022.1:29438..30227;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29450 29867 . + . ID=id-AFQR01000022.1:29450..29867;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29450 29801 . + . ID=id-AFQR01000022.1:29450..29801;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29453 29621 . + . ID=id-AFQR01000022.1:29453..29621;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29453 29525 . + . ID=id-AFQR01000022.1:29453..29525;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29468 30149 . + . ID=id-AFQR01000022.1:29468..30149;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29468 29783 . + . ID=id-AFQR01000022.1:29468..29783;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29474 29960 . + . ID=id-AFQR01000022.1:29474..29960;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29474 29864 . + . ID=id-AFQR01000022.1:29474..29864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29483 30212 . + . ID=id-AFQR01000022.1:29483..30212;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29483 30062 . + . ID=id-AFQR01000022.1:29483..30062;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29483 29696 . + . ID=id-AFQR01000022.1:29483..29696;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29483 29615 . + . ID=id-AFQR01000022.1:29483..29615;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29483 29510 . + . ID=id-AFQR01000022.1:29483..29510;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29741 29969 . + . ID=id-AFQR01000022.1:29741..29969;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 29786 29903 . + . ID=id-AFQR01000022.1:29786..29903;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 30292 31236 . - . ID=gene-GGE_1331;Name=licA;gbkey=Gene;gene=licA;gene_biotype=protein_coding;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank CDS 30292 31236 . - 0 ID=cds-EGT81145.1;Parent=gene-GGE_1331;Dbxref=InterPro:IPR002573,InterPro:IPR011009,PFAM:PF01633,NCBI_GP:EGT81145.1;Name=EGT81145.1;Ontology_term=GO:0016773;gbkey=CDS;gene=licA;go_function=phosphotransferase activity alcohol group as acceptor|0016773||;locus_tag=GGE_1331;product=Protein licA;protein_id=EGT81145.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30316 30328 . - . ID=id-GGE_1331;Note=seg;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30328 31198 . - . ID=id-GGE_1331-2;Dbxref=InterPro:IPR011009;Note=superfamily:SSF56112~protein kinase-like (pk-like)~protein kinase-like domain;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30427 30931 . - . ID=id-GGE_1331-3;Note=specific~superfamily%3B label: ChoK;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30430 30913 . - . ID=id-GGE_1331-4;Note=multi-dom%3B label: APH;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30475 30889 . - . ID=id-GGE_1331-5;Dbxref=InterPro:IPR002573,PFAM:PF01633;Note=choline_kinase~choline/ethanolamine kinase;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30586 30940 . - . ID=id-GGE_1331-6;Note=Gene3D:3.90.1200.10;gbkey=misc_feature;gene=licA;locus_tag=GGE_1331 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 30294 31095 . + . ID=id-AFQR01000022.1:30294..31095;Note=VFDB hit~VFDB:VFG0326;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 31307 33319 . - . ID=gene-GGE_1332;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank CDS 31307 33319 . - 0 ID=cds-EGT81146.1;Parent=gene-GGE_1332;Dbxref=GeneID:81335627,InterPro:IPR006076,InterPro:IPR008471,InterPro:IPR017610,InterPro:IPR023032,PFAM:PF01266,PFAM:PF05430,TIGRFAM:TIGR03197,NCBI_GP:EGT81146.1;Name=EGT81146.1;Ontology_term=GO:0055114,GO:0008168,GO:0016645,GO:0016491;gbkey=CDS;gene=mnmC;go_function=methyltransferase activity|0008168||,oxidoreductase activity acting on the CH-NH group of donors|0016645||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1332;product=5-methylaminomethyl-2-thiouridine methyltransferase-like protein;protein_id=EGT81146.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31307 33317 . - . ID=id-GGE_1332;Note=multi-dom%3B label: mnmC;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31307 32063 . - . ID=id-GGE_1332-2;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31325 33275 . - . ID=id-GGE_1332-3;Dbxref=InterPro:IPR023032;Note=HAMAP:MF_01102~mnmc~5-methylaminomethyl-2-thiouridine methyltransferase-like protein;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31334 32015 . - . ID=id-GGE_1332-4;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31661 31679 . - . ID=id-GGE_1332-5;Dbxref=InterPro:IPR008471,PFAM:PF05430;Note=duf752~domain of unknown function duf752;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32081 32468 . - . ID=id-GGE_1332-6;Note=HMMPanther:PTHR13847:SF104~5-methylaminomethyl-2-thiouridine methyltransferase-like protein~HMMPanther:PTHR13847~family not named;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32090 32183 . - . ID=id-GGE_1332-7;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32102 32513 . - . ID=id-GGE_1332-8;Dbxref=InterPro:IPR017610,TIGRFAM:TIGR03197;Note=mnmc_cterm: trna u-34 5-methylaminomethyl-~trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32102 32423 . - . ID=id-GGE_1332-9;Dbxref=InterPro:IPR006076,PFAM:PF01266;Note=dao~fad dependent oxidoreductase;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32141 32456 . - . ID=id-GGE_1332-10;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;gene=mnmC;locus_tag=GGE_1332 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31346 32909 . + . ID=id-AFQR01000022.1:31346..32909;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 31568 33020 . + . ID=id-AFQR01000022.1:31568..33020;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32007 32016 . + . ID=id-AFQR01000022.1:32007..32016;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32571 32580 . + . ID=id-AFQR01000022.1:32571..32580;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 32991 33000 . + . ID=id-AFQR01000022.1:32991..33000;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 33468 34688 . + . ID=gene-GGE_1333;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank CDS 33468 34688 . + 0 ID=cds-EGT81147.1;Parent=gene-GGE_1333;Dbxref=GeneID:1169589,InterPro:IPR000794,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR018201,PFAM:PF00109,PFAM:PF02801,NCBI_GP:EGT81147.1;Name=EGT81147.1;Ontology_term=GO:0009058,GO:0008152,GO:0003824;gbkey=CDS;gene=fabB;go_function=catalytic activity|0003824||;go_process=biosynthetic process|0009058||,metabolic process|0008152||;locus_tag=GGE_1333;product=3-oxoacyl-acyl-carrier-protein synthase 1;protein_id=EGT81147.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33468 34686 . + . ID=id-GGE_1333;Note=multi-dom%3B label: PRK07967;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33468 34680 . + . ID=id-GGE_1333-2;Dbxref=InterPro:IPR000794;Note=HMMPanther:PTHR11712:SF48~3-oxoacyl-[acyl-carrier-protein] synthase 1~HMMPanther:PTHR11712~family not named~beta-ketoacyl synthase;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33468 34224 . + . ID=id-GGE_1333-3;Dbxref=InterPro:IPR016039;Note=superfamily:SSF53901~thiolase-like~thiolase-like;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33474 34668 . + . ID=id-GGE_1333-4;Note=specific~superfamily%3B label: cond_enzyme superfamily;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33474 34200 . + . ID=id-GGE_1333-5;Dbxref=InterPro:IPR014030,PFAM:PF00109;Note=ketoacyl-synt~beta-ketoacyl synthase;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33486 34227 . + . ID=id-GGE_1333-6;Dbxref=InterPro:IPR016038;Note=Gene3D:3.40.47.10~thiolase-like%2C subgroup;gbkey=misc_feature;gene=fabB;locus_tag=GGE_1333 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33519 34161 . - . ID=id-AFQR01000022.1:33519..34161;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33519 33927 . - . ID=id-AFQR01000022.1:33519..33927;Dbxref=InterPro:IPR018201;Note=PatternScan:PS00606~b_ketoacyl_synthase~beta-ketoacyl synthase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33795 34227 . - . ID=id-AFQR01000022.1:33795..34227;Dbxref=InterPro:IPR014031,PFAM:PF02801;Note=ketoacyl-synt_c~beta-ketoacyl synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 33900 34254 . - . ID=id-AFQR01000022.1:33900..34254;Dbxref=InterPro:IPR016038;Note=Gene3D:3.40.47.10~thiolase-like%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34044 34107 . - . ID=id-AFQR01000022.1:34044..34107;Dbxref=InterPro:IPR016039;Note=superfamily:SSF53901~thiolase-like~thiolase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 34755 35018 . - . ID=gene-GGE_1334;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank CDS 34755 35018 . - 0 ID=cds-EGT81148.1;Parent=gene-GGE_1334;Dbxref=GeneID:1169966,InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011902,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014025,PFAM:PF00462,TIGRFAM:TIGR02183,NCBI_GP:EGT81148.1;Name=EGT81148.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;gene=grxA;go_function=electron carrier activity|0009055||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_1334;product=Glutaredoxin;protein_id=EGT81148.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34755 35016 . - . ID=id-GGE_1334;Dbxref=InterPro:IPR002109;Note=ProfileScan:PS51354~glutaredoxin_2~glutaredoxin;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34755 34998 . - . ID=id-GGE_1334-2;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34761 35013 . - . ID=id-GGE_1334-3;Dbxref=InterPro:IPR011902,TIGRFAM:TIGR02183;Note=grxa: glutaredoxin%2C grxa family~glutaredoxin%2C grxa;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34761 34995 . - . ID=id-GGE_1334-4;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34764 34992 . - . ID=id-GGE_1334-5;Note=HMMPanther:PTHR10168~glutaredoxin;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34764 34983 . - . ID=id-GGE_1334-6;Note=specific~superfamily%3B label: GRX_family;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34764 34953 . - . ID=id-GGE_1334-7;Dbxref=InterPro:IPR002109,PFAM:PF00462;Note=glutaredoxin~glutaredoxin;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34764 34812 . - . ID=id-GGE_1334-8;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34770 34803 . - . ID=id-GGE_1334-9;Dbxref=InterPro:IPR011767;Note=PatternScan:PS00195~glutaredoxin_1~glutaredoxin active site;gbkey=misc_feature;gene=grxA;locus_tag=GGE_1334 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34797 34953 . + . ID=id-AFQR01000022.1:34797..34953;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 34797 34911 . + . ID=id-AFQR01000022.1:34797..34911;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 35135 36049 . + . ID=gene-GGE_1335;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank CDS 35135 36049 . + 0 ID=cds-EGT81149.1;Parent=gene-GGE_1335;Dbxref=InterPro:IPR004666,InterPro:IPR011761,InterPro:IPR013651,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR023533,PFAM:PF08443,TIGRFAM:TIGR00768,NCBI_GP:EGT81149.1;Name=EGT81149.1;Ontology_term=GO:0006464,GO:0005524,GO:0003824,GO:0016874;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||,catalytic activity|0003824||,ligase activity|0016874||;go_process=protein modification process|0006464||;locus_tag=GGE_1335;product=Ribosomal protein S6 modification protein;protein_id=EGT81149.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35135 36041 . + . ID=id-GGE_1335;Dbxref=InterPro:IPR023533;Note=HAMAP:MF_01552~rimk~ribosomal s6 modification enzyme rimk;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35135 36026 . + . ID=id-GGE_1335-2;Note=HMMPanther:PTHR21621~family not named;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35141 36011 . + . ID=id-GGE_1335-3;Dbxref=InterPro:IPR004666,TIGRFAM:TIGR00768;Note=multi-dom~rimk_fam: alpha-l-glutamate ligases%2C rimk fa~ribosomal s6 modification enzyme rimk/lysine biosynthesis enzyme lysx%3B label: rimK_fam;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35450 35702 . + . ID=id-GGE_1335-4;Dbxref=InterPro:IPR013651,PFAM:PF08443;Note=superfamily~rimk~atp-grasp fold%2C rimk-type%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35453 35714 . + . ID=id-GGE_1335-5;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35471 35684 . + . ID=id-GGE_1335-6;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature;gene=rimK;locus_tag=GGE_1335 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35268 35277 . - . ID=id-AFQR01000022.1:35268..35277;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35357 35447 . - . ID=id-AFQR01000022.1:35357..35447;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 35456 35669 . - . ID=id-AFQR01000022.1:35456..35669;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36119 36128 . + . ID=id-AFQR01000022.1:36119..36128;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 36289 36714 . + . ID=gene-GGE_1336;Name=GGE_1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank CDS 36289 36714 . + 0 ID=cds-EGT81150.1;Parent=gene-GGE_1336;Dbxref=GeneID:293392051,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006963,PFAM:PF00384,PFAM:PF04879,NCBI_GP:EGT81150.1;Name=EGT81150.1;Note=ZP_06636385;Ontology_term=GO:0009055,GO:0016491;gbkey=CDS;go_function=electron carrier activity|0009055||,oxidoreductase activity|0016491||;locus_tag=GGE_1336;product=formate dehydrogenase H;protein_id=EGT81150.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36289 36709 . + . ID=id-GGE_1336;Note=HMMPanther:PTHR11615:SF38~formate dehydrogenase\nitrate reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36298 36706 . + . ID=id-GGE_1336-2;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36301 36448 . + . ID=id-GGE_1336-3;Note=Gene3D:2.20.25.90;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36301 36445 . + . ID=id-GGE_1336-4;Dbxref=InterPro:IPR006963,PFAM:PF04879;Note=molybdop_fe4s4~molybdopterin oxidoreductase%2C fe4s4 domain;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36310 36694 . + . ID=id-GGE_1336-5;Note=superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36313 36346 . + . ID=id-GGE_1336-6;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00551~molybdopterin_prok_1~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36478 36523 . + . ID=id-GGE_1336-7;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase~Gene3D:3.40.50.740;gbkey=misc_feature;locus_tag=GGE_1336 GCA_000222085.2|AFQR01000022.1 Genbank gene 36763 38448 . + . ID=gene-GGE_1337;Name=GGE_1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank CDS 36763 38448 . + 0 ID=cds-EGT81151.1;Parent=gene-GGE_1337;Dbxref=GeneID:261868409,InterPro:IPR006478,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,PFAM:PF00384,PFAM:PF01568,TIGRFAM:TIGR01591,NCBI_GP:EGT81151.1;Name=EGT81151.1;Note=YP_003256331;Ontology_term=GO:0015942,GO:0055114,GO:0009326,GO:0005488,GO:0009055,GO:0008863,GO:0030151,GO:0016491;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||;go_function=binding|0005488||,electron carrier activity|0009055||,formate dehydrogenase activity|0008863||,molybdenum ion binding|0030151||,oxidoreductase activity|0016491||;go_process=formate metabolic process|0015942||,oxidation-reduction process|0055114||;locus_tag=GGE_1337;product=formate dehydrogenase subunit alpha;protein_id=EGT81151.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 38353 . + . ID=id-GGE_1337;Dbxref=InterPro:IPR006478,TIGRFAM:TIGR01591;Note=fdh-alpha: formate dehydrogenase%2C alpha sub~formate dehydrogenase%2C alpha subunit;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 38350 . + . ID=id-GGE_1337-2;Note=HMMPanther:PTHR11615:SF38~formate dehydrogenase\nitrate reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 38122 . + . ID=id-GGE_1337-3;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 37990 . + . ID=id-GGE_1337-4;Note=superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 37753 . + . ID=id-GGE_1337-5;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36763 37381 . + . ID=id-GGE_1337-6;Note=Gene3D:3.40.228.10;gbkey=misc_feature;locus_tag=GGE_1337 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36817 37594 . - . ID=id-AFQR01000022.1:36817..37594;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00490~molybdopterin_prok_2~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 36847 38143 . - . ID=id-AFQR01000022.1:36847..38143;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00932~molybdopterin_prok_3~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 37018 37564 . - . ID=id-AFQR01000022.1:37018..37564;Note=Gene3D:3.90.55.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 37084 38023 . - . ID=id-AFQR01000022.1:37084..38023;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 37114 38014 . - . ID=id-AFQR01000022.1:37114..38014;Dbxref=InterPro:IPR009010;Note=Gene3D:2.40.40.20~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 37114 38011 . - . ID=id-AFQR01000022.1:37114..38011;Note=specific~superfamily%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 37216 37993 . - . ID=id-AFQR01000022.1:37216..37993;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 38553 38894 . - . ID=gene-GGE_1338;Name=GGE_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank CDS 38553 38894 . - 0 ID=cds-EGT81152.1;Parent=gene-GGE_1338;Dbxref=GeneID:251792234,InterPro:IPR000688,InterPro:IPR020538,PFAM:PF01155,TIGRFAM:TIGR00100,NCBI_GP:EGT81152.1;Name=EGT81152.1;Note=YP_003006956;Ontology_term=GO:0006464,GO:0016151;gbkey=CDS;go_function=nickel ion binding|0016151||;go_process=protein modification process|0006464||;locus_tag=GGE_1338;product=hydrogenase nickel insertion protein HypA;protein_id=EGT81152.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38553 38892 . - . ID=id-GGE_1338;Dbxref=InterPro:IPR000688;Note=HAMAP:MF_00213~hypa~hydrogenase nickel incorporation protein hypa/hybf;gbkey=misc_feature;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38553 38889 . - . ID=id-GGE_1338-2;Dbxref=InterPro:IPR000688,PFAM:PF01155;Note=hypa~hydrogenase nickel incorporation protein hypa/hybf;gbkey=misc_feature;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38553 38883 . - . ID=id-GGE_1338-3;Dbxref=InterPro:IPR000688,TIGRFAM:TIGR00100;Note=hypa: hydrogenase nickel insertion protein h~hydrogenase nickel incorporation protein hypa/hybf;gbkey=misc_feature;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38559 38889 . - . ID=id-GGE_1338-4;Note=superfamily%3B label: HypA superfamily;gbkey=misc_feature;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38655 38682 . - . ID=id-GGE_1338-5;Dbxref=InterPro:IPR020538;Note=PatternScan:PS01249~hypa~hydrogenase nickel incorporation protein hypa/hybf%2C conserved site;gbkey=misc_feature;locus_tag=GGE_1338 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38979 38988 . - . ID=id-AFQR01000022.1:38979..38988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 38988 40202 . - . ID=gene-GGE_1339;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank CDS 38988 40202 . - 0 ID=cds-EGT81153.1;Parent=gene-GGE_1339;Dbxref=GeneID:1169972,InterPro:IPR004445,PFAM:PF03616,TIGRFAM:TIGR00210,NCBI_GP:EGT81153.1;Name=EGT81153.1;Ontology_term=GO:0015813,GO:0016021,GO:0015501;gbkey=CDS;gene=gltS;go_component=integral to membrane|0016021||;go_function=glutamate:sodium symporter activity|0015501||;go_process=L-glutamate transport|0015813||;locus_tag=GGE_1339;product=Sodium/glutamate symport carrier protein;protein_id=EGT81153.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 38997 40185 . - . ID=id-GGE_1339;Dbxref=InterPro:IPR004445,TIGRFAM:TIGR00210;Note=glts: sodium/glutamate symporter~sodium/glutamate symporter;gbkey=misc_feature;gene=gltS;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39000 40182 . - . ID=id-GGE_1339-2;Note=superfamily%3B label: GltS superfamily;gbkey=misc_feature;gene=gltS;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39000 40086 . - . ID=id-GGE_1339-3;Dbxref=InterPro:IPR004445,PFAM:PF03616;Note=multi-dom~glt_symporter~sodium/glutamate symporter%3B label: Glt_symporter;gbkey=misc_feature;gene=gltS;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39003 39051 . - . ID=id-GGE_1339-4;Note=transmembrane_regions;gbkey=misc_feature;gene=gltS;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39021 39033 . - . ID=id-GGE_1339-5;Note=seg;gbkey=misc_feature;gene=gltS;locus_tag=GGE_1339 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39024 39321 . + . ID=id-AFQR01000022.1:39024..39321;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39039 39894 . + . ID=id-AFQR01000022.1:39039..39894;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39048 40005 . + . ID=id-AFQR01000022.1:39048..40005;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39048 39648 . + . ID=id-AFQR01000022.1:39048..39648;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 40107 . + . ID=id-AFQR01000022.1:39057..40107;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39903 . + . ID=id-AFQR01000022.1:39057..39903;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39807 . + . ID=id-AFQR01000022.1:39057..39807;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39720 . + . ID=id-AFQR01000022.1:39057..39720;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39462 . + . ID=id-AFQR01000022.1:39057..39462;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39276 . + . ID=id-AFQR01000022.1:39057..39276;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39189 . + . ID=id-AFQR01000022.1:39057..39189;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 39057 39078 . + . ID=id-AFQR01000022.1:39057..39078;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 40232 42487 . - . ID=gene-GGE_1340;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank CDS 40232 42487 . - 0 ID=cds-EGT81154.1;Parent=gene-GGE_1340;Dbxref=GeneID:1172017,InterPro:IPR002205,InterPro:IPR005742,InterPro:IPR006691,InterPro:IPR013757,InterPro:IPR013758,InterPro:IPR013760,InterPro:IPR020899,PFAM:PF00521,PFAM:PF03989,TIGRFAM:TIGR01062,NCBI_GP:EGT81154.1;Name=EGT81154.1;Ontology_term=GO:0006259,GO:0006265,GO:0006355,GO:0005694,GO:0005524,GO:0003677,GO:0003918,GO:0003916,GO:0003700;gbkey=CDS;gene=parC;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||,DNA topoisomerase activity|0003916||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=DNA metabolic process|0006259||,DNA topological change|0006265||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1340;product=DNA topoisomerase 4 subunit A;protein_id=EGT81154.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40232 42023 . - . ID=id-GGE_1340;Note=HMMPanther:PTHR10169:SF4~dna gyrase subunit a~HMMPanther:PTHR10169~dna topoisomerase/gyrase;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40232 41696 . - . ID=id-GGE_1340-2;Dbxref=InterPro:IPR013760;Note=superfamily:SSF56719~type ii dna topoisomerase~dna topoisomerase%2C type iia%2C central;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40259 42437 . - . ID=id-GGE_1340-3;Dbxref=InterPro:IPR005742,TIGRFAM:TIGR01062;Note=parc_gneg: dna topoisomerase iv%2C a subunit~dna topoisomerase iv%2C subunit a%2C gram-negative;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40259 42434 . - . ID=id-GGE_1340-4;Note=multi-dom%3B label: parC_Gneg;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40325 41555 . - . ID=id-GGE_1340-5;Note=specific~superfamily%3B label: TOP4c;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40331 41543 . - . ID=id-GGE_1340-6;Dbxref=InterPro:IPR002205,PFAM:PF00521;Note=dna_topoisoiv~dna topoisomerase%2C type iia%2C subunit a/c-terminal;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40337 40784 . - . ID=id-GGE_1340-7;Dbxref=InterPro:IPR013758;Note=Gene3D:3.90.199.10~dna topoisomerase%2C type iia%2C subunit a/ c-terminal%2C alpha-beta;gbkey=misc_feature;gene=parC;locus_tag=GGE_1340 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40262 41300 . + . ID=id-AFQR01000022.1:40262..41300;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40280 40610 . + . ID=id-AFQR01000022.1:40280..40610;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40331 42173 . + . ID=id-AFQR01000022.1:40331..42173;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40331 41501 . + . ID=id-AFQR01000022.1:40331..41501;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40349 42020 . + . ID=id-AFQR01000022.1:40349..42020;Dbxref=InterPro:IPR006691,PFAM:PF03989;Note=dna_gyrasea_c~dna gyrase/topoisomerase iv%2C subunit a beta-pinwheel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40514 40949 . + . ID=id-AFQR01000022.1:40514..40949;Dbxref=InterPro:IPR020899;Note=Gene3D:3.30.1360.40~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40517 41321 . + . ID=id-AFQR01000022.1:40517..41321;Dbxref=InterPro:IPR013757;Note=Gene3D:1.10.268.10~dna topoisomerase%2C type iia%2C subunit a%2C alpha-helical;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 40991 41726 . + . ID=id-AFQR01000022.1:40991..41726;Note=superfamily:SSF101904~gyra/parc c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 42555 44453 . - . ID=gene-GGE_1341;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank CDS 42555 44453 . - 0 ID=cds-EGT81155.1;Parent=gene-GGE_1341;Dbxref=GeneID:1172018,InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR003594,InterPro:IPR005737,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,InterPro:IPR014721,InterPro:IPR018522,InterPro:IPR020568,PFAM:PF00204,PFAM:PF00986,PFAM:PF02518,TIGRFAM:TIGR01055,NCBI_GP:EGT81155.1;Name=EGT81155.1;Ontology_term=GO:0006265,GO:0005694,GO:0005524,GO:0003677,GO:0003918;gbkey=CDS;gene=parE;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||;go_process=DNA topological change|0006265||;locus_tag=GGE_1341;product=DNA topoisomerase 4 subunit B;protein_id=EGT81155.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42561 44436 . - . ID=id-GGE_1341;Dbxref=InterPro:IPR005737,TIGRFAM:TIGR01055;Note=multi-dom~pare_gneg: dna topoisomerase iv%2C b subunit~dna topoisomerase iv%2C subunit b%2C gram-negative%3B label: parE_Gneg;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42561 43185 . - . ID=id-GGE_1341-2;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42564 44415 . - . ID=id-GGE_1341-3;Note=HMMPanther:PTHR10169:SF20~dna gyrase subunit b~HMMPanther:PTHR10169~dna topoisomerase/gyrase;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42567 43194 . - . ID=id-GGE_1341-4;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42639 42978 . - . ID=id-GGE_1341-5;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42657 42846 . - . ID=id-GGE_1341-6;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature;gene=parE;locus_tag=GGE_1341 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42582 43803 . + . ID=id-AFQR01000022.1:42582..43803;Dbxref=InterPro:IPR018522;Note=PatternScan:PS00177~topoisomerase_ii~dna topoisomerase%2C type iia%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42594 44106 . + . ID=id-AFQR01000022.1:42594..44106;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42594 43962 . + . ID=id-AFQR01000022.1:42594..43962;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42597 43353 . + . ID=id-AFQR01000022.1:42597..43353;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42597 42753 . + . ID=id-AFQR01000022.1:42597..42753;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42597 42633 . + . ID=id-AFQR01000022.1:42597..42633;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42600 43797 . + . ID=id-AFQR01000022.1:42600..43797;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42600 43689 . + . ID=id-AFQR01000022.1:42600..43689;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42600 42960 . + . ID=id-AFQR01000022.1:42600..42960;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42600 42882 . + . ID=id-AFQR01000022.1:42600..42882;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42603 43488 . + . ID=id-AFQR01000022.1:42603..43488;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42603 43002 . + . ID=id-AFQR01000022.1:42603..43002;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42603 42648 . + . ID=id-AFQR01000022.1:42603..42648;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42606 44235 . + . ID=id-AFQR01000022.1:42606..44235;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42606 44064 . + . ID=id-AFQR01000022.1:42606..44064;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42606 43992 . + . ID=id-AFQR01000022.1:42606..43992;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42606 43437 . + . ID=id-AFQR01000022.1:42606..43437;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42609 44046 . + . ID=id-AFQR01000022.1:42609..44046;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42609 43077 . + . ID=id-AFQR01000022.1:42609..43077;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42621 43899 . + . ID=id-AFQR01000022.1:42621..43899;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42621 43632 . + . ID=id-AFQR01000022.1:42621..43632;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42621 43131 . + . ID=id-AFQR01000022.1:42621..43131;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42624 44166 . + . ID=id-AFQR01000022.1:42624..44166;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42627 43569 . + . ID=id-AFQR01000022.1:42627..43569;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42627 43269 . + . ID=id-AFQR01000022.1:42627..43269;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42633 43641 . + . ID=id-AFQR01000022.1:42633..43641;Dbxref=InterPro:IPR005737;Note=FPrintScan:PR01098~topismrase4b~dna topoisomerase iv%2C subunit b%2C gram-negative;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42762 44217 . + . ID=id-AFQR01000022.1:42762..44217;Dbxref=InterPro:IPR002288,PFAM:PF00986;Note=superfamily~dna_gyraseb_c~dna topoisomerase%2C type iia%2C subunit b%3B label: DNA_gyraseB_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42894 43791 . + . ID=id-AFQR01000022.1:42894..43791;Note=specific~superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 42939 43290 . + . ID=id-AFQR01000022.1:42939..43290;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 43038 43206 . + . ID=id-AFQR01000022.1:43038..43206;Note=specific~superfamily%3B label: TopoII_MutL_Trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 43056 43209 . + . ID=id-AFQR01000022.1:43056..43209;Dbxref=InterPro:IPR013506,PFAM:PF00204;Note=dna_gyraseb~dna topoisomerase%2C type iia%2C subunit b%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 43056 43206 . + . ID=id-AFQR01000022.1:43056..43206;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 43158 43740 . + . ID=id-AFQR01000022.1:43158..43740;Dbxref=InterPro:IPR013759;Note=Gene3D:3.40.50.670~dna topoisomerase%2C type iia%2C subunit b/n-terminal%2C alpha-beta;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 43260 43719 . + . ID=id-AFQR01000022.1:43260..43719;Dbxref=InterPro:IPR013760;Note=superfamily:SSF56719~type ii dna topoisomerase~dna topoisomerase%2C type iia%2C central;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 44499 44508 . + . ID=id-AFQR01000022.1:44499..44508;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 44527 45543 . - . ID=gene-GGE_1342;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=GGE_1342 GCA_000222085.2|AFQR01000022.1 Genbank CDS 44527 45543 . - 0 ID=cds-EGT81156.1;Parent=gene-GGE_1342;Dbxref=GeneID:3915727,InterPro:IPR004960,InterPro:IPR011920,PFAM:PF03279,TIGRFAM:TIGR02207,NCBI_GP:EGT81156.1;Name=EGT81156.1;Ontology_term=GO:0009244,GO:0009276,GO:0016021,GO:0008415,GO:0016747;gbkey=CDS;gene=htrB;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=acyltransferase activity|0008415||,transferase activity transferring acyl groups other than amino-acyl groups|0016747||;go_process=lipopolysaccharide core region biosynthetic process|0009244||;locus_tag=GGE_1342;product=Lipid A biosynthesis lauroyl acyltransferase;protein_id=EGT81156.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 44629 45439 . - . ID=id-GGE_1342;Dbxref=InterPro:IPR011920,TIGRFAM:TIGR02207;Note=lipid_a_htrb: lipid a biosynthesis lauro~lipid a biosynthesis lauroyl (or palmitoleoyl) acyltransferase;gbkey=misc_feature;gene=htrB;locus_tag=GGE_1342 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 44629 45409 . - . ID=id-GGE_1342-2;Dbxref=InterPro:IPR004960,PFAM:PF03279;Note=lip_a_acyltrans~bacterial lipid a biosynthesis acyltransferase;gbkey=misc_feature;gene=htrB;locus_tag=GGE_1342 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 44710 45349 . - . ID=id-GGE_1342-3;Note=multi-dom%3B label: PRK08734;gbkey=misc_feature;gene=htrB;locus_tag=GGE_1342 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 44947 45088 . - . ID=id-GGE_1342-4;Note=specific~superfamily%3B label: LPLAT_LABLAT-like;gbkey=misc_feature;gene=htrB;locus_tag=GGE_1342 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45423 45432 . + . ID=id-AFQR01000022.1:45423..45432;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 45560 46987 . + . ID=gene-GGE_1343;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank CDS 45560 46987 . + 0 ID=cds-EGT81157.1;Parent=gene-GGE_1343;Dbxref=GeneID:6093960,InterPro:IPR004820,InterPro:IPR004821,InterPro:IPR011611,InterPro:IPR011913,InterPro:IPR011914,InterPro:IPR014729,InterPro:IPR023030,PFAM:PF00294,PFAM:PF01467,TIGRFAM:TIGR00125,TIGRFAM:TIGR02198,TIGRFAM:TIGR02199,NCBI_GP:EGT81157.1;Name=EGT81157.1;Ontology_term=GO:0009058,GO:0005975,GO:0003824,GO:0016779,GO:0016773;gbkey=CDS;gene=hldE;go_function=catalytic activity|0003824||,nucleotidyltransferase activity|0016779||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=biosynthetic process|0009058||,carbohydrate metabolic process|0005975||;locus_tag=GGE_1343;product=ADP-heptose synthase/adenylyltransferase-like protein;protein_id=EGT81157.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45560 46976 . + . ID=id-GGE_1343;Note=multi-dom%3B label: PRK11316;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45560 46973 . + . ID=id-GGE_1343-2;Note=VFDB hit~VFDB:VFG0331;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45560 46913 . + . ID=id-GGE_1343-3;Note=HMMPanther:PTHR10584:SF96~adp-heptose synthase/adenylyltransferase-like protein~HMMPanther:PTHR10584~sugar kinase;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45572 46973 . + . ID=id-GGE_1343-4;Dbxref=InterPro:IPR023030;Note=HAMAP:MF_01603~hlde~adp-heptose synthase/adenylyltransferase-like protein;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45572 46490 . + . ID=id-GGE_1343-5;Dbxref=InterPro:IPR011913,TIGRFAM:TIGR02198;Note=rfae_dom_i: bifunctional protein rfae%2C d~rfae bifunctional protein%2C domain i;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45590 46472 . + . ID=id-GGE_1343-6;Note=Gene3D:3.40.1190.20~superfamily:SSF53613~ribokinase-like;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45590 46439 . + . ID=id-GGE_1343-7;Dbxref=InterPro:IPR011611,PFAM:PF00294;Note=pfkb~carbohydrate/purine kinase;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45596 46454 . + . ID=id-GGE_1343-8;Note=specific~superfamily%3B label: RfaE_like;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45971 45980 . + . ID=id-GGE_1343-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hldE;locus_tag=GGE_1343 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45578 46187 . - . ID=id-AFQR01000022.1:45578..46187;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45764 46586 . - . ID=id-AFQR01000022.1:45764..46586;Dbxref=InterPro:IPR004821,TIGRFAM:TIGR00125;Note=cyt_tran_rel: cytidyltransferase-related~cytidyltransferase-related;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45938 46592 . - . ID=id-AFQR01000022.1:45938..46592;Dbxref=InterPro:IPR004820,PFAM:PF01467;Note=ctp_transf_2~cytidylyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45956 46583 . - . ID=id-AFQR01000022.1:45956..46583;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45956 46580 . - . ID=id-AFQR01000022.1:45956..46580;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45968 46571 . - . ID=id-AFQR01000022.1:45968..46571;Note=superfamily%3B label: nt_trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 45992 46550 . - . ID=id-AFQR01000022.1:45992..46550;Dbxref=InterPro:IPR011914,TIGRFAM:TIGR02199;Note=rfae_dom_ii: bifunctional protein rfae%2C~rfae bifunctional protein%2C domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 46234 46243 . - . ID=id-AFQR01000022.1:46234..46243;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 47099 48178 . + . ID=gene-GGE_1344;Name=GGE_1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank CDS 47099 48178 . + 0 ID=cds-EGT81158.1;Parent=gene-GGE_1344;Dbxref=InterPro:IPR001525,InterPro:IPR018117,PFAM:PF00145,TIGRFAM:TIGR00675,NCBI_GP:EGT81158.1;Name=EGT81158.1;Note=hpaIIM;Ontology_term=GO:0006306,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA methylation|0006306||;locus_tag=GGE_1344;product=Modification methylase HpaII;protein_id=EGT81158.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47198 48071 . + . ID=id-GGE_1344;Dbxref=InterPro:IPR001525;Note=HMMPanther:PTHR10629:SF11~cytosine-specific methyltransferase~HMMPanther:PTHR10629~cytosine-specific methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47198 47696 . + . ID=id-GGE_1344-2;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47201 48065 . + . ID=id-GGE_1344-3;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47201 48059 . + . ID=id-GGE_1344-4;Note=specific~superfamily~multi-dom%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47201 48056 . + . ID=id-GGE_1344-5;Dbxref=InterPro:IPR001525,PFAM:PF00145;Note=dna_methylase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47207 48047 . + . ID=id-GGE_1344-6;Dbxref=InterPro:IPR001525,TIGRFAM:TIGR00675;Note=dcm: dna (cytosine-5-)-methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1344 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47138 47390 . - . ID=id-AFQR01000022.1:47138..47390;Dbxref=InterPro:IPR018117;Note=PatternScan:PS00094~c5_mtase_1~dna methylase%2C c-5 cytosine-specific%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47141 47651 . - . ID=id-AFQR01000022.1:47141..47651;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47144 47507 . - . ID=id-AFQR01000022.1:47144..47507;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 47150 47204 . - . ID=id-AFQR01000022.1:47150..47204;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 48180 48782 . + . ID=gene-GGE_1345;Name=GGE_1345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1345 GCA_000222085.2|AFQR01000022.1 Genbank CDS 48180 48782 . + 0 ID=cds-EGT81159.1;Parent=gene-GGE_1345;Dbxref=GeneID:167854712,NCBI_GP:EGT81159.1;Name=EGT81159.1;Note=ZP_02477491~HPS_10560;gbkey=CDS;locus_tag=GGE_1345;product=Hypothetical protein;protein_id=EGT81159.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48222 48687 . - . ID=id-AFQR01000022.1:48222..48687;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 48975 49244 . + . ID=gene-GGE_1346;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank CDS 48975 49244 . + 0 ID=cds-EGT81160.1;Parent=gene-GGE_1346;Dbxref=GeneID:81335579,InterPro:IPR000589,InterPro:IPR005290,InterPro:IPR009068,PFAM:PF00312,TIGRFAM:TIGR00952,NCBI_GP:EGT81160.1;Name=EGT81160.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsO;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1346;product=30S ribosomal protein S15;protein_id=EGT81160.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48975 49242 . + . ID=id-GGE_1346;Note=HMMPanther:PTHR23321~family not named;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48981 49239 . + . ID=id-GGE_1346-2;Dbxref=InterPro:IPR009068;Note=superfamily:SSF47060~s15/ns1 rna-binding domain~s15/ns1%2C rna-binding;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48987 49233 . + . ID=id-GGE_1346-3;Dbxref=InterPro:IPR005290,TIGRFAM:TIGR00952;Note=s15_bact: ribosomal protein s15~ribosomal protein s15%2C bacterial-type;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48987 49230 . + . ID=id-GGE_1346-4;Dbxref=InterPro:IPR009068;Note=Gene3D:1.10.287.10~s15/ns1%2C rna-binding;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48996 49215 . + . ID=id-GGE_1346-5;Note=specific~superfamily%3B label: Ribosomal_S15p_S13e;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 48999 49218 . + . ID=id-GGE_1346-6;Dbxref=InterPro:IPR000589,PFAM:PF00312;Note=ribosomal_s15~ribosomal protein s15;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49008 49209 . + . ID=id-GGE_1346-7;Note=BlastProDom:PD157043~q4qkj8_haei8_q4qkj8;gbkey=misc_feature;gene=rpsO;locus_tag=GGE_1346 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49014 49131 . - . ID=id-AFQR01000022.1:49014..49131;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49068 49092 . - . ID=id-AFQR01000022.1:49068..49092;Dbxref=InterPro:IPR000589;Note=PatternScan:PS00362~ribosomal_s15~ribosomal protein s15;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 49386 49601 . - . ID=gene-GGE_1347;Name=GGE_1347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1347 GCA_000222085.2|AFQR01000022.1 Genbank CDS 49386 49601 . - 0 ID=cds-EGT81161.1;Parent=gene-GGE_1347;Dbxref=NCBI_GP:EGT81161.1;Name=EGT81161.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;gbkey=CDS;locus_tag=GGE_1347;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT81161.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49386 49578 . - . ID=id-GGE_1347;Note=superfamily~HMMPanther:PTHR11384:SF18~subfamily not named~HMMPanther:PTHR11384~family not named~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1347 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49386 49539 . - . ID=id-GGE_1347-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1347 GCA_000222085.2|AFQR01000022.1 Genbank gene 49611 50273 . - . ID=gene-GGE_1348;Name=GGE_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1348 GCA_000222085.2|AFQR01000022.1 Genbank CDS 49611 50273 . - 0 ID=cds-EGT81162.1;Parent=gene-GGE_1348;Dbxref=NCBI_GP:EGT81162.1;Name=EGT81162.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;gbkey=CDS;locus_tag=GGE_1348;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT81162.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49617 49770 . - . ID=id-GGE_1348;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_1348 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49662 50223 . - . ID=id-GGE_1348-2;Note=HMMPanther:PTHR11384:SF18~subfamily not named~HMMPanther:PTHR11384~family not named;gbkey=misc_feature;locus_tag=GGE_1348 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49734 49938 . - . ID=id-GGE_1348-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1348 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49905 49950 . - . ID=id-GGE_1348-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1348 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 49872 49899 . + . ID=id-AFQR01000022.1:49872..49899;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50119 50128 . + . ID=id-AFQR01000022.1:50119..50128;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 50393 50929 . - . ID=gene-GGE_1349;Name=GGE_1349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1349 GCA_000222085.2|AFQR01000022.1 Genbank CDS 50393 50929 . - 0 ID=cds-EGT81163.1;Parent=gene-GGE_1349;Dbxref=InterPro:IPR010509,PFAM:PF06472,NCBI_GP:EGT81163.1;Name=EGT81163.1;Note=Hypothetical aBC transporter;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=transport|0006810||;locus_tag=GGE_1349;product=putative aBC transporter;protein_id=EGT81163.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50414 50885 . - . ID=id-GGE_1349;Dbxref=InterPro:IPR010509,PFAM:PF06472;Note=abc_membrane_2~abc transporter;gbkey=misc_feature;locus_tag=GGE_1349 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50423 50864 . - . ID=id-GGE_1349-2;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_1349 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50528 50780 . - . ID=id-GGE_1349-3;Note=HMMPanther:PTHR11384:SF2~abc transporter~HMMPanther:PTHR11384~family not named;gbkey=misc_feature;locus_tag=GGE_1349 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50423 50816 . + . ID=id-AFQR01000022.1:50423..50816;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50462 50813 . + . ID=id-AFQR01000022.1:50462..50813;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50462 50726 . + . ID=id-AFQR01000022.1:50462..50726;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50966 51005 . - . ID=id-AFQR01000022.1:50966..51005;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50975 51062 . - . ID=id-AFQR01000022.1:50975..51062;Note=multi-dom%3B label: COG4178;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50984 51101 . + . ID=id-AFQR01000022.1:50984..51101;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 50990 51095 . + . ID=id-AFQR01000022.1:50990..51095;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 51099 51108 . + . ID=id-AFQR01000022.1:51099..51108;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 51326 52414 . - . ID=gene-GGE_1350;Name=GGE_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1350 GCA_000222085.2|AFQR01000022.1 Genbank CDS 51326 52414 . - 0 ID=cds-EGT81164.1;Parent=gene-GGE_1350;Dbxref=InterPro:IPR000531,PFAM:PF00593,NCBI_GP:EGT81164.1;Name=EGT81164.1;Note=Hypothetical tonB-dependent receptor%2C beta-barrel;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1350;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT81164.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 51338 52397 . - . ID=id-GGE_1350;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1350 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 51359 52379 . - . ID=id-GGE_1350-2;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1350 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 51581 52151 . - . ID=id-GGE_1350-3;Note=specific~superfamily%3B label: ligand_gated_channel;gbkey=misc_feature;locus_tag=GGE_1350 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 51785 51950 . - . ID=id-GGE_1350-4;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1350 GCA_000222085.2|AFQR01000022.1 Genbank gene 52620 53855 . + . ID=gene-GGE_1351;Name=GGE_1351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1351 GCA_000222085.2|AFQR01000022.1 Genbank CDS 52620 53855 . + 0 ID=cds-EGT81165.1;Parent=gene-GGE_1351;Dbxref=GeneID:240950081,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT81165.1;Name=EGT81165.1;Note=ZP_04754382;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1351;product=Prophage CP4-57 integrase;protein_id=EGT81165.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 52620 53841 . + . ID=id-GGE_1351;Note=multi-dom%3B label: PRK09692;gbkey=misc_feature;locus_tag=GGE_1351 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 52716 53700 . + . ID=id-GGE_1351-2;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1351 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 52920 52935 . - . ID=id-AFQR01000022.1:52920..52935;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 53109 53268 . - . ID=id-AFQR01000022.1:53109..53268;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 53133 53265 . - . ID=id-AFQR01000022.1:53133..53265;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 53142 53256 . - . ID=id-AFQR01000022.1:53142..53256;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 54292 54693 . - . ID=gene-GGE_1352;Name=GGE_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1352 GCA_000222085.2|AFQR01000022.1 Genbank CDS 54292 54693 . - 0 ID=cds-EGT81166.1;Parent=gene-GGE_1352;Dbxref=GeneID:145635923,InterPro:IPR009057,InterPro:IPR014875,PFAM:PF08765,NCBI_GP:EGT81166.1;Name=EGT81166.1;Note=ZP_01791610;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_1352;product=putative homeodomain-like protein;protein_id=EGT81166.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 54328 54658 . - . ID=id-GGE_1352;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_1352 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 54331 54655 . - . ID=id-GGE_1352-2;Note=superfamily%3B label: Mor superfamily;gbkey=misc_feature;locus_tag=GGE_1352 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 54457 54526 . - . ID=id-GGE_1352-3;Dbxref=InterPro:IPR014875,PFAM:PF08765;Note=mor~mor transcription activator;gbkey=misc_feature;locus_tag=GGE_1352 GCA_000222085.2|AFQR01000022.1 Genbank gene 55280 55477 . + . ID=gene-GGE_1353;Name=GGE_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1353 GCA_000222085.2|AFQR01000022.1 Genbank CDS 55280 55477 . + 0 ID=cds-EGT81167.1;Parent=gene-GGE_1353;Dbxref=InterPro:IPR009061,NCBI_GP:EGT81167.1;Name=EGT81167.1;Note=Hypothetical dNA binding domain%2C putative;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||;locus_tag=GGE_1353;product=putative dNA binding domain%2C putative;protein_id=EGT81167.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 55322 55424 . + . ID=id-GGE_1353;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_1353 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 55328 55421 . + . ID=id-GGE_1353-2;Note=superfamily%3B label: HTH_MerR-SF superfamily;gbkey=misc_feature;locus_tag=GGE_1353 GCA_000222085.2|AFQR01000022.1 Genbank gene 55837 56616 . + . ID=gene-GGE_1354;Name=GGE_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1354 GCA_000222085.2|AFQR01000022.1 Genbank CDS 55837 56616 . + 0 ID=cds-EGT81168.1;Parent=gene-GGE_1354;Dbxref=GeneID:167855834,InterPro:IPR013557,PFAM:PF08346,NCBI_GP:EGT81168.1;Name=EGT81168.1;Note=ZP_02478586;gbkey=CDS;locus_tag=GGE_1354;product=phage anti-repressor protein;protein_id=EGT81168.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 55921 56101 . + . ID=id-GGE_1354;Note=superfamily%3B label: AntA superfamily;gbkey=misc_feature;locus_tag=GGE_1354 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 55921 56098 . + . ID=id-GGE_1354-2;Dbxref=InterPro:IPR013557,PFAM:PF08346;Note=anta~anta/antb antirepressor;gbkey=misc_feature;locus_tag=GGE_1354 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 55863 55872 . - . ID=id-AFQR01000022.1:55863..55872;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 56673 57677 . + . ID=gene-GGE_1355;Name=GGE_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1355 GCA_000222085.2|AFQR01000022.1 Genbank CDS 56673 57677 . + 0 ID=cds-EGT81169.1;Parent=gene-GGE_1355;Dbxref=GeneID:145632698,NCBI_GP:EGT81169.1;Name=EGT81169.1;Note=ZP_01788432~CGSHi3655_02749;gbkey=CDS;locus_tag=GGE_1355;product=Hypothetical protein;protein_id=EGT81169.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 57612 57621 . - . ID=id-AFQR01000022.1:57612..57621;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 57670 58005 . + . ID=gene-GGE_1356;Name=GGE_1356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1356 GCA_000222085.2|AFQR01000022.1 Genbank CDS 57670 58005 . + 0 ID=cds-EGT81170.1;Parent=gene-GGE_1356;Dbxref=GeneID:251793976,NCBI_GP:EGT81170.1;Name=EGT81170.1;Note=YP_003008708~NT05HA_2317;gbkey=CDS;locus_tag=GGE_1356;product=Hypothetical protein;protein_id=EGT81170.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 57738 57747 . - . ID=id-AFQR01000022.1:57738..57747;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 57998 60154 . + . ID=gene-GGE_1357;Name=GGE_1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1357 GCA_000222085.2|AFQR01000022.1 Genbank CDS 57998 60154 . + 0 ID=cds-EGT81171.1;Parent=gene-GGE_1357;Dbxref=GeneID:15603647,InterPro:IPR009270,PFAM:PF06048,NCBI_GP:EGT81171.1;Name=EGT81171.1;Note=NP_246721;gbkey=CDS;locus_tag=GGE_1357;product=Hypothetical protein;protein_id=EGT81171.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 58502 58829 . + . ID=id-GGE_1357;Dbxref=InterPro:IPR009270,PFAM:PF06048;Note=duf927~protein of unknown function duf927;gbkey=misc_feature;locus_tag=GGE_1357 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 58709 59435 . + . ID=id-GGE_1357-2;Note=superfamily%3B label: DUF927 superfamily;gbkey=misc_feature;locus_tag=GGE_1357 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 58064 59555 . - . ID=id-AFQR01000022.1:58064..59555;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 59594 59603 . - . ID=id-AFQR01000022.1:59594..59603;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 60929 61270 . - . ID=gene-GGE_1358;Name=GGE_1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1358 GCA_000222085.2|AFQR01000022.1 Genbank CDS 60929 61270 . - 0 ID=cds-EGT81172.1;Parent=gene-GGE_1358;Dbxref=InterPro:IPR000531,NCBI_GP:EGT81172.1;Name=EGT81172.1;Note=Hypothetical protein;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1358;product=Hypothetical protein;protein_id=EGT81172.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 60935 61241 . - . ID=id-GGE_1358;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1358 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 60935 61235 . - . ID=id-GGE_1358-2;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1358 GCA_000222085.2|AFQR01000022.1 Genbank gene 61387 61698 . - . ID=gene-GGE_1359;Name=GGE_1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1359 GCA_000222085.2|AFQR01000022.1 Genbank CDS 61387 61698 . - 0 ID=cds-EGT81173.1;Parent=gene-GGE_1359;Dbxref=InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT81173.1;Name=EGT81173.1;Note=Hypothetical protein;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1359;product=Hypothetical protein;protein_id=EGT81173.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 61387 61663 . - . ID=id-GGE_1359;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1359 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 61387 61660 . - . ID=id-GGE_1359-2;Note=superfamily~superfamily:SSF56935~porins%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_1359 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 61387 61639 . - . ID=id-GGE_1359-3;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1359 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 61886 61895 . + . ID=id-AFQR01000022.1:61886..61895;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62063 62072 . - . ID=id-AFQR01000022.1:62063..62072;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62080 62089 . + . ID=id-AFQR01000022.1:62080..62089;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 62110 62634 . - . ID=gene-GGE_1360;Name=GGE_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1360 GCA_000222085.2|AFQR01000022.1 Genbank CDS 62110 62634 . - 0 ID=cds-EGT81174.1;Parent=gene-GGE_1360;Dbxref=InterPro:IPR000667,InterPro:IPR012338,PFAM:PF02113,TIGRFAM:TIGR00666,NCBI_GP:EGT81174.1;Name=EGT81174.1;Note=Hypothetical peptidase S13%2C D-Ala-D-Ala carboxypeptidase C;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||;go_process=proteolysis|0006508||;locus_tag=GGE_1360;product=putative peptidase S13%2C D-Ala-D-Ala carboxypeptidase C;protein_id=EGT81174.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62110 62632 . - . ID=id-GGE_1360;Note=superfamily%3B label: Beta-lactamase superfamily;gbkey=misc_feature;locus_tag=GGE_1360 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62110 62623 . - . ID=id-GGE_1360-2;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;locus_tag=GGE_1360 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62110 62557 . - . ID=id-GGE_1360-3;Note=Gene3D:3.40.710.10;gbkey=misc_feature;locus_tag=GGE_1360 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62110 62542 . - . ID=id-GGE_1360-4;Dbxref=InterPro:IPR000667,PFAM:PF02113;Note=peptidase_s13~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature;locus_tag=GGE_1360 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62152 62476 . + . ID=id-AFQR01000022.1:62152..62476;Dbxref=InterPro:IPR000667;Note=FPrintScan:PR00922~dadacbptase3~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62155 62284 . + . ID=id-AFQR01000022.1:62155..62284;Dbxref=InterPro:IPR000667;Note=FPrintScan:PR00922~dadacbptase3~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62155 62239 . + . ID=id-AFQR01000022.1:62155..62239;Dbxref=InterPro:IPR000667;Note=FPrintScan:PR00922~dadacbptase3~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62664 62667 . - . ID=id-AFQR01000022.1:62664..62667;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62676 62826 . - . ID=id-AFQR01000022.1:62676..62826;Note=Gene3D:3.40.710.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62679 63501 . + . ID=id-AFQR01000022.1:62679..63501;Dbxref=InterPro:IPR000667;Note=FPrintScan:PR00922~dadacbptase3~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62691 62826 . + . ID=id-AFQR01000022.1:62691..62826;Dbxref=InterPro:IPR000667;Note=FPrintScan:PR00922~dadacbptase3~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62694 63483 . - . ID=id-AFQR01000022.1:62694..63483;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62706 63474 . - . ID=id-AFQR01000022.1:62706..63474;Note=superfamily%3B label: Beta-lactamase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62787 63393 . - . ID=id-AFQR01000022.1:62787..63393;Dbxref=InterPro:IPR000667,TIGRFAM:TIGR00666;Note=pbp4: d-alanyl-d-alanine carboxypeptidase/d-~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 62832 63348 . - . ID=id-AFQR01000022.1:62832..63348;Dbxref=InterPro:IPR000667,PFAM:PF02113;Note=peptidase_s13~peptidase s13%2C d-ala-d-ala carboxypeptidase c;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 63685 64188 . + . ID=gene-GGE_1361;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank CDS 63685 64188 . + 0 ID=cds-EGT81175.1;Parent=gene-GGE_1361;Dbxref=GeneID:1170015,InterPro:IPR001437,InterPro:IPR006359,InterPro:IPR018151,InterPro:IPR022691,InterPro:IPR023459,PFAM:PF01272,PFAM:PF03449,TIGRFAM:TIGR01462,NCBI_GP:EGT81175.1;Name=EGT81175.1;Ontology_term=GO:0006355,GO:0003677,GO:0003711;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||,transcription elongation regulator activity|0003711||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1361;product=Transcription elongation factor greA;protein_id=EGT81175.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63715 64156 . + . ID=id-GGE_1361;Dbxref=InterPro:IPR023459;Note=multi-dom~HAMAP:MF_00105~grea_greb~transcription elongation factor grea/greb%3B label: greA;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63715 63910 . + . ID=id-GGE_1361-2;Dbxref=InterPro:IPR022691;Note=Gene3D:1.10.287.180~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63718 63919 . + . ID=id-GGE_1361-3;Dbxref=InterPro:IPR022691;Note=superfamily:SSF46557~grea transcript cleavage protein domain~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63718 63904 . + . ID=id-GGE_1361-4;Dbxref=InterPro:IPR022691,PFAM:PF03449;Note=grea_greb_n~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63724 63898 . + . ID=id-GGE_1361-5;Note=superfamily%3B label: GreA_GreB_N superfamily;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63727 64141 . + . ID=id-GGE_1361-6;Dbxref=InterPro:IPR006359,TIGRFAM:TIGR01462;Note=grea: transcription elongation factor grea~transcription elongation factor grea;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63763 63781 . + . ID=id-GGE_1361-7;Dbxref=InterPro:IPR018151;Note=PatternScan:PS00829~greab_1~transcription elongation factor%2C grea/greb%2C conserved site;gbkey=misc_feature;gene=greA;locus_tag=GGE_1361 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63736 64075 . - . ID=id-AFQR01000022.1:63736..64075;Dbxref=InterPro:IPR018151;Note=PatternScan:PS00830~greab_2~transcription elongation factor%2C grea/greb%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63910 63961 . - . ID=id-AFQR01000022.1:63910..63961;Dbxref=InterPro:IPR001437,PFAM:PF01272;Note=grea_greb~transcription elongation factor%2C grea/greb;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63916 63955 . - . ID=id-AFQR01000022.1:63916..63955;Note=superfamily%3B label: GreA_GreB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63922 63952 . - . ID=id-AFQR01000022.1:63922..63952;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 63922 63949 . - . ID=id-AFQR01000022.1:63922..63949;Dbxref=InterPro:IPR001437;Note=Gene3D:3.10.50.30~transcription elongation factor%2C grea/greb;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64193 64202 . + . ID=id-AFQR01000022.1:64193..64202;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64211 64220 . - . ID=id-AFQR01000022.1:64211..64220;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 64227 64526 . - . ID=gene-GGE_1362;Name=GGE_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank CDS 64227 64526 . - 0 ID=cds-EGT81176.1;Parent=gene-GGE_1362;Dbxref=GeneID:3025185,InterPro:IPR001890,InterPro:IPR017924,PFAM:PF01985,TIGRFAM:TIGR00253,NCBI_GP:EGT81176.1;Name=EGT81176.1;Note=HI_1333;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||;locus_tag=GGE_1362;product=RNA-binding protein;protein_id=EGT81176.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64233 64521 . - . ID=id-GGE_1362;Dbxref=InterPro:IPR001890;Note=superfamily:SSF75471~yhby-like~rna-binding%2C crm domain;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64233 64518 . - . ID=id-GGE_1362-2;Dbxref=InterPro:IPR001890;Note=ProfileScan:PS51295~crm~rna-binding%2C crm domain;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64236 64512 . - . ID=id-GGE_1362-3;Dbxref=InterPro:IPR001890;Note=Gene3D:3.30.110.60~rna-binding%2C crm domain;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64239 64512 . - . ID=id-GGE_1362-4;Dbxref=InterPro:IPR017924,TIGRFAM:TIGR00253;Note=superfamily~rna_bind_yhby: putative rna-binding pro~rna-binding%2C crm domain%2C prokaryote%3B label: CRS1_YhbY superfamily;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64239 64479 . - . ID=id-GGE_1362-5;Dbxref=InterPro:IPR001890,PFAM:PF01985;Note=crs1_yhby~rna-binding%2C crm domain;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64257 64497 . - . ID=id-GGE_1362-6;Dbxref=InterPro:IPR001890;Note=BlastProDom:PD010559~q4qkj3_haei8_q4qkj3~rna-binding%2C crm domain;gbkey=misc_feature;locus_tag=GGE_1362 GCA_000222085.2|AFQR01000022.1 Genbank gene 64653 65282 . + . ID=gene-GGE_1363;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank CDS 64653 65282 . + 0 ID=cds-EGT81177.1;Parent=gene-GGE_1363;Dbxref=GeneID:81335573,InterPro:IPR002877,InterPro:IPR004512,InterPro:IPR015507,PFAM:PF01728,PIR:PIRSF005461,TIGRFAM:TIGR00438,NCBI_GP:EGT81177.1;Name=EGT81177.1;Ontology_term=GO:0032259,GO:0031167,GO:0006364,GO:0008168,GO:0003676,GO:0016436;gbkey=CDS;gene=rlmE;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,rRNA (uridine) methyltransferase activity|0016436||;go_process=methylation|0032259||,rRNA methylation|0031167||,rRNA processing|0006364||;locus_tag=GGE_1363;product=Ribosomal RNA large subunit methyltransferase E;protein_id=EGT81177.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64665 65271 . + . ID=id-GGE_1363;Dbxref=InterPro:IPR015507,PIR:PIRSF005461;Note=23s ribosomal rna methyltransferase~ribosomal rna large subunit methyltransferase e~HMMPanther:PTHR10920~ribosomal rna methyltransferase~ribosomal rna large subunit methyltransferase e;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64698 65235 . + . ID=id-GGE_1363-2;Dbxref=InterPro:IPR015507;Note=HAMAP:MF_01547~23srrna_methyltr_e~ribosomal rna large subunit methyltransferase e;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64713 65217 . + . ID=id-GGE_1363-3;Dbxref=InterPro:IPR004512,TIGRFAM:TIGR00438;Note=rrmj: ribosomal rna large subunit methyltran~ribosomal rna methyltransferase e%2C gammaproteobacteria;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64743 65193 . + . ID=id-GGE_1363-4;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64746 65187 . + . ID=id-GGE_1363-5;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64746 65184 . + . ID=id-GGE_1363-6;Dbxref=InterPro:IPR002877,PFAM:PF01728;Note=ftsj~ribosomal rna methyltransferase rrmj/ftsj;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64752 64767 . + . ID=id-GGE_1363-7;Note=multi-dom%3B label: PRK11760;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 64815 64992 . + . ID=id-GGE_1363-8;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;gene=rlmE;locus_tag=GGE_1363 GCA_000222085.2|AFQR01000022.1 Genbank gene 65372 67264 . + . ID=gene-GGE_1364;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank CDS 65372 67264 . + 0 ID=cds-EGT81178.1;Parent=gene-GGE_1364;Dbxref=GeneID:2492507,InterPro:IPR000642,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,InterPro:IPR011546,PFAM:PF00004,PFAM:PF01434,PFAM:PF06480,TIGRFAM:TIGR01241,NCBI_GP:EGT81178.1;Name=EGT81178.1;Ontology_term=GO:0030163,GO:0006508,GO:0016021,GO:0016020,GO:0005524,GO:0004222,GO:0008270;gbkey=CDS;gene=ftsH;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,metalloendopeptidase activity|0004222||,zinc ion binding|0008270||;go_process=protein catabolic process|0030163||,proteolysis|0006508||;locus_tag=GGE_1364;product=ATP-dependent zinc metalloprotease FtsH;protein_id=EGT81178.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65372 67157 . + . ID=id-GGE_1364;Note=HMMPanther:PTHR23076:SF10~cell division protein ftsh homolog~HMMPanther:PTHR23076~family not named;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65378 65408 . + . ID=id-GGE_1364-2;Note=seg;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65381 67184 . + . ID=id-GGE_1364-3;Note=HAMAP:MF_01458~ftsh;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65387 65441 . + . ID=id-GGE_1364-4;Note=transmembrane_regions;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65390 65636 . + . ID=id-GGE_1364-5;Dbxref=InterPro:IPR011546,PFAM:PF06480;Note=ftsh_ext~peptidase m41%2C ftsh extracellular;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65414 67157 . + . ID=id-GGE_1364-6;Note=multi-dom%3B label: hflB;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65666 66860 . + . ID=id-GGE_1364-7;Dbxref=InterPro:IPR005936,TIGRFAM:TIGR01241;Note=ftsh_fam: atp-dependent metallopeptidase hfl~peptidase m41%2C ftsh;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65792 66131 . + . ID=id-GGE_1364-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65810 65888 . + . ID=id-GGE_1364-9;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65834 65873 . + . ID=id-GGE_1364-10;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;gene=ftsH;locus_tag=GGE_1364 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65405 66140 . - . ID=id-AFQR01000022.1:65405..66140;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65411 67199 . - . ID=id-AFQR01000022.1:65411..67199;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65426 65588 . - . ID=id-AFQR01000022.1:65426..65588;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65429 66242 . - . ID=id-AFQR01000022.1:65429..66242;Dbxref=InterPro:IPR003960;Note=PatternScan:PS00674~aaa~atpase%2C aaa-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65441 65663 . - . ID=id-AFQR01000022.1:65441..65663;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65624 66335 . - . ID=id-AFQR01000022.1:65624..66335;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65771 65933 . - . ID=id-AFQR01000022.1:65771..65933;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65948 66572 . - . ID=id-AFQR01000022.1:65948..66572;Note=superfamily%3B label: Peptidase_M41 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 65984 66575 . - . ID=id-AFQR01000022.1:65984..66575;Note=superfamily:SSF140990~ftsh protease domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 66008 66512 . - . ID=id-AFQR01000022.1:66008..66512;Dbxref=InterPro:IPR000642,PFAM:PF01434;Note=peptidase_m41~peptidase m41;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67378 67387 . - . ID=id-AFQR01000022.1:67378..67387;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 67389 68216 . + . ID=gene-GGE_1365;Name=GGE_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank CDS 67389 68216 . + 0 ID=cds-EGT81179.1;Parent=gene-GGE_1365;Dbxref=GeneID:1169335,InterPro:IPR000489,InterPro:IPR006390,InterPro:IPR011005,PFAM:PF00809,TIGRFAM:TIGR01496,NCBI_GP:EGT81179.1;Name=EGT81179.1;Note=folP-A;Ontology_term=GO:0044237,GO:0009396,GO:0042558,GO:0004156;gbkey=CDS;go_function=dihydropteroate synthase activity|0004156||;go_process=cellular metabolic process|0044237||,folic acid-containing compound biosynthetic process|0009396||,pteridine-containing compound metabolic process|0042558||;locus_tag=GGE_1365;product=Dihydropteroate synthase;protein_id=EGT81179.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67389 68211 . + . ID=id-GGE_1365;Dbxref=InterPro:IPR011005;Note=superfamily:SSF51717~dihydropteroate synthetase-like~dihydropteroate synthase-like;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67428 68175 . + . ID=id-GGE_1365-2;Dbxref=InterPro:IPR000489;Note=Gene3D:3.20.20.20~pterin-binding;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67434 68157 . + . ID=id-GGE_1365-3;Note=specific~superfamily%3B label: DHPS;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67434 68148 . + . ID=id-GGE_1365-4;Dbxref=InterPro:IPR000489;Note=ProfileScan:PS50972~pterin_binding~pterin-binding;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67437 68160 . + . ID=id-GGE_1365-5;Dbxref=InterPro:IPR006390,TIGRFAM:TIGR01496;Note=dhps: dihydropteroate synthase~dihydropteroate synthase;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67437 68157 . + . ID=id-GGE_1365-6;Note=multi-dom%3B label: DHPS;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67440 68166 . + . ID=id-GGE_1365-7;Note=HMMPanther:PTHR20941:SF1~dihydropteroate synthase~HMMPanther:PTHR20941~family not named;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67449 68007 . + . ID=id-GGE_1365-8;Dbxref=InterPro:IPR000489,PFAM:PF00809;Note=pterin_bind~pterin-binding;gbkey=misc_feature;locus_tag=GGE_1365 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67431 67542 . - . ID=id-AFQR01000022.1:67431..67542;Dbxref=InterPro:IPR000489;Note=PatternScan:PS00793~dhps_2~pterin-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67434 68109 . - . ID=id-AFQR01000022.1:67434..68109;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 67437 67440 . - . ID=id-AFQR01000022.1:67437..67440;Dbxref=InterPro:IPR000489;Note=PatternScan:PS00792~dhps_1~pterin-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 68254 69588 . + . ID=gene-GGE_1366;Name=GGE_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank CDS 68254 69588 . + 0 ID=cds-EGT81180.1;Parent=gene-GGE_1366;Dbxref=GeneID:1171026,InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR006352,InterPro:IPR016055,InterPro:IPR016066,PFAM:PF00408,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,TIGRFAM:TIGR01455,NCBI_GP:EGT81180.1;Name=EGT81180.1;Note=glmM1;Ontology_term=GO:0005975,GO:0016868,GO:0000287,GO:0008966;gbkey=CDS;go_function=intramolecular transferase activity phosphotransferases|0016868||,magnesium ion binding|0000287||,phosphoglucosamine mutase activity|0008966||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_1366;product=Phosphoglucosamine mutase;protein_id=EGT81180.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68254 68797 . + . ID=id-GGE_1366;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68260 68797 . + . ID=id-GGE_1366-2;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68266 69577 . + . ID=id-GGE_1366-3;Note=multi-dom%3B label: glmM;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68266 69574 . + . ID=id-GGE_1366-4;Note=HMMPanther:PTHR22573:SF14~subfamily not named~HMMPanther:PTHR22573~family not named;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68266 68650 . + . ID=id-GGE_1366-5;Dbxref=InterPro:IPR005844,PFAM:PF02878;Note=pgm_pmm_i~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain i;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68272 69553 . + . ID=id-GGE_1366-6;Note=specific~superfamily%3B label: GlmM;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68275 69565 . + . ID=id-GGE_1366-7;Dbxref=InterPro:IPR006352,TIGRFAM:TIGR01455;Note=glmm: phosphoglucosamine mutase~phosphoglucosamine mutase;gbkey=misc_feature;locus_tag=GGE_1366 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68284 68542 . - . ID=id-AFQR01000022.1:68284..68542;Dbxref=InterPro:IPR016066;Note=PatternScan:PS00710~pgm_pmm~alpha-d-phosphohexomutase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68299 68539 . - . ID=id-AFQR01000022.1:68299..68539;Dbxref=InterPro:IPR005841;Note=FPrintScan:PR00509~pgmpmm~alpha-d-phosphohexomutase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68302 68956 . - . ID=id-AFQR01000022.1:68302..68956;Dbxref=InterPro:IPR005841;Note=FPrintScan:PR00509~pgmpmm~alpha-d-phosphohexomutase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68305 68428 . - . ID=id-AFQR01000022.1:68305..68428;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68314 68776 . - . ID=id-AFQR01000022.1:68314..68776;Dbxref=InterPro:IPR005841;Note=FPrintScan:PR00509~pgmpmm~alpha-d-phosphohexomutase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68374 69466 . - . ID=id-AFQR01000022.1:68374..69466;Note=Gene3D:3.30.310.50;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68458 68803 . - . ID=id-AFQR01000022.1:68458..68803;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68464 69373 . - . ID=id-AFQR01000022.1:68464..69373;Dbxref=InterPro:IPR005843,PFAM:PF00408;Note=pgm_pmm_iv~alpha-d-phosphohexomutase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68518 69325 . - . ID=id-AFQR01000022.1:68518..69325;Note=superfamily:SSF55957~phosphoglucomutase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68545 68725 . - . ID=id-AFQR01000022.1:68545..68725;Dbxref=InterPro:IPR005845,PFAM:PF02879;Note=pgm_pmm_ii~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68563 68719 . - . ID=id-AFQR01000022.1:68563..68719;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68578 69028 . - . ID=id-AFQR01000022.1:68578..69028;Dbxref=InterPro:IPR005846,PFAM:PF02880;Note=pgm_pmm_iii~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68581 69028 . - . ID=id-AFQR01000022.1:68581..69028;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 68605 69007 . - . ID=id-AFQR01000022.1:68605..69007;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 69595 69604 . - . ID=id-AFQR01000022.1:69595..69604;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 69647 70144 . + . ID=gene-GGE_1367;Name=GGE_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1367 GCA_000222085.2|AFQR01000022.1 Genbank CDS 69647 70144 . + 0 ID=cds-EGT81181.1;Parent=gene-GGE_1367;Dbxref=GeneID:1175735,InterPro:IPR004449,InterPro:IPR013078,PFAM:PF00300,TIGRFAM:TIGR00249,NCBI_GP:EGT81181.1;Name=EGT81181.1;Note=sixA-A;Ontology_term=GO:0008969;gbkey=CDS;go_function=phosphohistidine phosphatase activity|0008969||;locus_tag=GGE_1367;product=Phosphohistidine phosphatase sixA;protein_id=EGT81181.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 69647 70124 . + . ID=id-GGE_1367;Dbxref=InterPro:IPR004449,TIGRFAM:TIGR00249;Note=sixa: phosphohistidine phosphatase sixa~phosphohistidine phosphatase sixa%2C subgroup~superfamily:SSF53254~phosphoglycerate mutase-like;gbkey=misc_feature;locus_tag=GGE_1367 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 69647 70115 . + . ID=id-GGE_1367-2;Note=Gene3D:3.40.50.1240;gbkey=misc_feature;locus_tag=GGE_1367 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 69653 70103 . + . ID=id-GGE_1367-3;Note=specific~superfamily%3B label: HP superfamily;gbkey=misc_feature;locus_tag=GGE_1367 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 69656 69869 . + . ID=id-GGE_1367-4;Dbxref=InterPro:IPR013078,PFAM:PF00300;Note=pgam~histidine phosphatase superfamily%2C clade-1;gbkey=misc_feature;locus_tag=GGE_1367 GCA_000222085.2|AFQR01000022.1 Genbank gene 70366 70767 . + . ID=gene-GGE_1368;Name=GGE_1368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1368 GCA_000222085.2|AFQR01000022.1 Genbank CDS 70366 70767 . + 0 ID=cds-EGT81182.1;Parent=gene-GGE_1368;Dbxref=GeneID:309973141,InterPro:IPR004238,PFAM:PF02987,NCBI_GP:EGT81182.1;Name=EGT81182.1;Note=ADO96342;gbkey=CDS;locus_tag=GGE_1368;product=putative late embryogenesis abundant protein%2C group 4;protein_id=EGT81182.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70366 70435 . + . ID=id-GGE_1368;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1368 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70408 70585 . - . ID=id-AFQR01000022.1:70408..70585;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70414 70441 . - . ID=id-AFQR01000022.1:70414..70441;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70423 70507 . - . ID=id-AFQR01000022.1:70423..70507;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70432 70588 . - . ID=id-AFQR01000022.1:70432..70588;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70432 70510 . - . ID=id-AFQR01000022.1:70432..70510;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70492 70642 . - . ID=id-AFQR01000022.1:70492..70642;Dbxref=InterPro:IPR004238,PFAM:PF02987;Note=lea_4~late embryogenesis abundant protein%2C group 4;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 70843 71109 . + . ID=gene-GGE_1369;Name=GGE_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1369 GCA_000222085.2|AFQR01000022.1 Genbank CDS 70843 71109 . + 0 ID=cds-EGT81183.1;Parent=gene-GGE_1369;Dbxref=InterPro:IPR007840,PFAM:PF05166,NCBI_GP:EGT81183.1;Name=EGT81183.1;Note=HI_1446;gbkey=CDS;locus_tag=GGE_1369;product=UPF0745 protein;protein_id=EGT81183.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70843 71107 . + . ID=id-GGE_1369;Dbxref=InterPro:IPR007840;Note=superfamily~HAMAP:MF_01866~upf0745~uncharacterised protein family upf0745%3B label: YcgL superfamily;gbkey=misc_feature;locus_tag=GGE_1369 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70843 71086 . + . ID=id-GGE_1369-2;Dbxref=InterPro:IPR007840;Note=BlastProDom:PD030374~y1446_haein_p44198~uncharacterised protein family upf0745;gbkey=misc_feature;locus_tag=GGE_1369 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 70852 71065 . + . ID=id-GGE_1369-3;Dbxref=InterPro:IPR007840,PFAM:PF05166;Note=ycgl~uncharacterised protein family upf0745;gbkey=misc_feature;locus_tag=GGE_1369 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71185 71194 . - . ID=id-AFQR01000022.1:71185..71194;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 71211 71939 . + . ID=gene-GGE_1370;Name=GGE_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank CDS 71211 71939 . + 0 ID=cds-EGT81184.1;Parent=gene-GGE_1370;Dbxref=InterPro:IPR002586,InterPro:IPR004472,PFAM:PF01656,PIR:PIRSF006755,TIGRFAM:TIGR00347,NCBI_GP:EGT81184.1;Name=EGT81184.1;Note=bioD-A;Ontology_term=GO:0009102,GO:0005524,GO:0004141,GO:0000287;gbkey=CDS;go_function=ATP binding|0005524||,dethiobiotin synthase activity|0004141||,magnesium ion binding|0000287||;go_process=biotin biosynthetic process|0009102||;locus_tag=GGE_1370;product=Putative dethiobiotin synthetase 1;protein_id=EGT81184.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71211 71934 . + . ID=id-GGE_1370;Dbxref=InterPro:IPR004472,PIR:PIRSF006755;Note=dethiobiotin synthetase~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71211 71907 . + . ID=id-GGE_1370-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71211 71892 . + . ID=id-GGE_1370-3;Note=HMMPanther:PTHR21343~family not named;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71211 71880 . + . ID=id-GGE_1370-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71217 71892 . + . ID=id-GGE_1370-5;Dbxref=InterPro:IPR004472;Note=HAMAP:MF_00336~biod~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71223 71844 . + . ID=id-GGE_1370-6;Note=multi-dom%3B label: CbiA;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71226 71814 . + . ID=id-GGE_1370-7;Dbxref=InterPro:IPR002586,PFAM:PF01656;Note=cbia~cobyrinic acid a%2Cc-diamide synthase;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71226 71751 . + . ID=id-GGE_1370-8;Dbxref=InterPro:IPR004472,TIGRFAM:TIGR00347;Note=biod: dethiobiotin synthase~dethiobiotin synthase;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71235 71310 . + . ID=id-GGE_1370-9;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1370 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 71505 71559 . - . ID=id-AFQR01000022.1:71505..71559;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 72025 72906 . - . ID=gene-GGE_1371;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank CDS 72025 72906 . - 0 ID=cds-EGT81185.1;Parent=gene-GGE_1371;Dbxref=GeneID:1170934,InterPro:IPR003171,InterPro:IPR004620,PFAM:PF02219,TIGRFAM:TIGR00676,NCBI_GP:EGT81185.1;Name=EGT81185.1;Ontology_term=GO:0009086,GO:0006555,GO:0055114,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NADPH) activity|0004489||;go_process=methionine biosynthetic process|0009086||,methionine metabolic process|0006555||,oxidation-reduction process|0055114||;locus_tag=GGE_1371;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=EGT81185.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72037 72895 . - . ID=id-GGE_1371;Note=Gene3D:3.20.20.220;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72055 72865 . - . ID=id-GGE_1371-2;Dbxref=InterPro:IPR003171,PFAM:PF02219;Note=multi-dom~mthfr~methylenetetrahydrofolate reductase%3B label: MTHFR;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72082 72850 . - . ID=id-GGE_1371-3;Note=superfamily:SSF51730~fad-linked oxidoreductase;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72094 72826 . - . ID=id-GGE_1371-4;Dbxref=InterPro:IPR004620,TIGRFAM:TIGR00676;Note=fadh2: 5%2C10-methylenetetrahydrofolate reduct~5%2C10-methylenetetrahydrofolate reductase;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72094 72823 . - . ID=id-GGE_1371-5;Note=specific~superfamily%3B label: MTHFR;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 72097 72829 . - . ID=id-GGE_1371-6;Note=HMMPanther:PTHR21091:SF1~methylenetetrahydrofolate reductase~HMMPanther:PTHR21091~family not named;gbkey=misc_feature;gene=metF;locus_tag=GGE_1371 GCA_000222085.2|AFQR01000022.1 Genbank gene 73226 73654 . + . ID=gene-GGE_1372;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank CDS 73226 73654 . + 0 ID=cds-EGT81186.1;Parent=gene-GGE_1372;Dbxref=GeneID:166230988,InterPro:IPR005822,InterPro:IPR005823,InterPro:IPR023563,InterPro:IPR023564,PFAM:PF00572,PIR:PIRSF002181,TIGRFAM:TIGR01066,NCBI_GP:EGT81186.1;Name=EGT81186.1;Ontology_term=GO:0006412,GO:0005840,GO:0003735;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1372;product=50S ribosomal protein L13;protein_id=EGT81186.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73226 73652 . + . ID=id-GGE_1372;Dbxref=InterPro:IPR005822,PIR:PIRSF002181;Note=ribosomal protein%2C l13p/l13aa/l16e/organellar l13 types~ribosomal protein l13~HMMPanther:PTHR11545~family not named~ribosomal protein l13;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73226 73649 . + . ID=id-GGE_1372-2;Dbxref=InterPro:IPR023564;Note=Gene3D:3.90.1180.10~ribosomal protein l13 domain;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73235 73646 . + . ID=id-GGE_1372-3;Dbxref=InterPro:IPR005823,TIGRFAM:TIGR01066;Note=rplm_bact: ribosomal protein l13~ribosomal protein l13%2C bacterial-type;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73271 73610 . + . ID=id-GGE_1372-4;Dbxref=InterPro:IPR023564;Note=superfamily:SSF52161~ribosomal protein l13~ribosomal protein l13 domain;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73271 73607 . + . ID=id-GGE_1372-5;Dbxref=InterPro:IPR005822,PFAM:PF00572;Note=ribosomal_l13~ribosomal protein l13;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73271 73568 . + . ID=id-GGE_1372-6;Note=specific~superfamily%3B label: Ribosomal_L13;gbkey=misc_feature;gene=rplM;locus_tag=GGE_1372 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73295 73541 . - . ID=id-AFQR01000022.1:73295..73541;Dbxref=InterPro:IPR023563;Note=PatternScan:PS00783~ribosomal_l13~ribosomal protein l13%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 73671 74063 . + . ID=gene-GGE_1373;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=GGE_1373 GCA_000222085.2|AFQR01000022.1 Genbank CDS 73671 74063 . + 0 ID=cds-EGT81187.1;Parent=gene-GGE_1373;Dbxref=GeneID:166229562,InterPro:IPR000754,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR020574,PFAM:PF00380,NCBI_GP:EGT81187.1;Name=EGT81187.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsI;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1373;product=30S ribosomal protein S9;protein_id=EGT81187.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73671 74061 . + . ID=id-GGE_1373;Dbxref=InterPro:IPR000754;Note=superfamily~HMMPanther:PTHR21569~family not named~ribosomal protein s9%3B label: Ribosomal_S9 superfamily;gbkey=misc_feature;gene=rpsI;locus_tag=GGE_1373 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73683 74052 . + . ID=id-GGE_1373-2;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=rpsI;locus_tag=GGE_1373 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73692 74043 . + . ID=id-GGE_1373-3;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature;gene=rpsI;locus_tag=GGE_1373 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73701 74034 . + . ID=id-GGE_1373-4;Dbxref=InterPro:IPR000754,PFAM:PF00380;Note=ribosomal_s9~ribosomal protein s9;gbkey=misc_feature;gene=rpsI;locus_tag=GGE_1373 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 73728 73878 . - . ID=id-AFQR01000022.1:73728..73878;Dbxref=InterPro:IPR020574;Note=PatternScan:PS00360~ribosomal_s9~ribosomal protein s9%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 74237 74875 . + . ID=gene-GGE_1374;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank CDS 74237 74875 . + 0 ID=cds-EGT81188.1;Parent=gene-GGE_1374;Dbxref=GeneID:1174446,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,NCBI_GP:EGT81188.1;Name=EGT81188.1;Ontology_term=GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||;locus_tag=GGE_1374;product=Stringent starvation protein A;protein_id=EGT81188.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74237 74846 . + . ID=id-GGE_1374;Note=multi-dom%3B label: sspA;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74255 74528 . + . ID=id-GGE_1374-2;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74258 74819 . + . ID=id-GGE_1374-3;Note=HMMPanther:PTHR11260:SF61~subfamily not named~HMMPanther:PTHR11260~family not named;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74264 74474 . + . ID=id-GGE_1374-4;Dbxref=InterPro:IPR004045;Note=ProfileScan:PS50404~gst_nter~glutathione s-transferase;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74267 74453 . + . ID=id-GGE_1374-5;Dbxref=InterPro:IPR004045,PFAM:PF02798;Note=gst_n~glutathione s-transferase;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74270 74543 . + . ID=id-GGE_1374-6;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74270 74456 . + . ID=id-GGE_1374-7;Note=specific~superfamily%3B label: GST_N_SspA;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74483 74618 . + . ID=id-GGE_1374-8;Dbxref=InterPro:IPR010987;Note=superfamily:SSF47616~glutathione s-transferase (gst) domain~glutathione s-transferase-like;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74513 74600 . + . ID=id-GGE_1374-9;Dbxref=InterPro:IPR017933;Note=ProfileScan:PS50405~gst_cter~glutathione s-transferase/chloride channel;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74516 74561 . + . ID=id-GGE_1374-10;Note=specific~superfamily%3B label: GST_C_family superfamily;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74546 74546 . + . ID=id-GGE_1374-11;Dbxref=InterPro:IPR010987;Note=Gene3D:1.20.1050.10~glutathione s-transferase-like;gbkey=misc_feature;gene=sspA;locus_tag=GGE_1374 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74282 74609 . - . ID=id-AFQR01000022.1:74282..74609;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74513 74546 . - . ID=id-AFQR01000022.1:74513..74546;Dbxref=InterPro:IPR004046,PFAM:PF00043;Note=gst_c~glutathione s-transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 74875 75327 . + . ID=gene-GGE_1375;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank CDS 74875 75327 . + 0 ID=cds-EGT81189.1;Parent=gene-GGE_1375;Dbxref=GeneID:1174447,InterPro:IPR007481,PFAM:PF04386,PIR:PIRSF005276,NCBI_GP:EGT81189.1;Name=EGT81189.1;gbkey=CDS;gene=sspB;locus_tag=GGE_1375;product=Stringent starvation protein B;protein_id=EGT81189.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74875 75325 . + . ID=id-GGE_1375;Dbxref=InterPro:IPR007481,PIR:PIRSF005276;Note=clpx-specific adaptor protein sspb~stringent starvation protein b;gbkey=misc_feature;gene=sspB;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74875 75238 . + . ID=id-GGE_1375-2;Dbxref=InterPro:IPR007481;Note=superfamily:SSF101738~stringent starvation protein b%2C sspb~stringent starvation protein b;gbkey=misc_feature;gene=sspB;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74881 75322 . + . ID=id-GGE_1375-3;Note=superfamily%3B label: SspB superfamily;gbkey=misc_feature;gene=sspB;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74887 75196 . + . ID=id-GGE_1375-4;Dbxref=InterPro:IPR007481;Note=Gene3D:2.30.30.220~stringent starvation protein b;gbkey=misc_feature;gene=sspB;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 74896 75304 . + . ID=id-GGE_1375-5;Dbxref=InterPro:IPR007481,PFAM:PF04386;Note=sspb~stringent starvation protein b;gbkey=misc_feature;gene=sspB;locus_tag=GGE_1375 GCA_000222085.2|AFQR01000022.1 Genbank gene 75363 77240 . - . ID=gene-GGE_1376;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank CDS 75363 77240 . - 0 ID=cds-EGT81190.1;Parent=gene-GGE_1376;Dbxref=GeneID:1175801,InterPro:IPR001017,InterPro:IPR005474,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005477,InterPro:IPR009014,InterPro:IPR015941,InterPro:IPR020826,PFAM:PF00676,PFAM:PF02779,PFAM:PF02780,TIGRFAM:TIGR00204,NCBI_GP:EGT81190.1;Name=EGT81190.1;Ontology_term=GO:0008152,GO:0016114,GO:0008661,GO:0003824,GO:0016624;gbkey=CDS;gene=dxs;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||,catalytic activity|0003824||,oxidoreductase activity acting on the aldehyde or oxo group of donors disulfide as acceptor|0016624||;go_process=metabolic process|0008152||,terpenoid biosynthetic process|0016114||;locus_tag=GGE_1376;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=EGT81190.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75378 77208 . - . ID=id-GGE_1376;Note=multi-dom%3B label: PRK05444;gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75378 76497 . - . ID=id-GGE_1376-2;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75393 77196 . - . ID=id-GGE_1376-3;Dbxref=InterPro:IPR005477;Note=HAMAP:MF_00315~dxp_synth~deoxyxylulose-5-phosphate synthase;gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75396 77193 . - . ID=id-GGE_1376-4;Dbxref=InterPro:IPR005477,TIGRFAM:TIGR00204;Note=dxs: 1-deoxy-d-xylulose-5-phosphate synthase~deoxyxylulose-5-phosphate synthase;gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75405 77199 . - . ID=id-GGE_1376-5;Note=HMMPanther:PTHR11624:SF20~1-deoxyxylulose-5-phosphate synthase~HMMPanther:PTHR11624~family not named;gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75504 76095 . - . ID=id-GGE_1376-6;Note=specific~superfamily%3B label: TPP_DXS;gbkey=misc_feature;gene=dxs;locus_tag=GGE_1376 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75414 76641 . + . ID=id-AFQR01000022.1:75414..76641;Dbxref=InterPro:IPR020826;Note=PatternScan:PS00802~transketolase_2~transketolase binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75423 75471 . + . ID=id-AFQR01000022.1:75423..75471;Dbxref=InterPro:IPR005474;Note=PatternScan:PS00801~transketolase_1~transketolase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75493 75502 . + . ID=id-AFQR01000022.1:75493..75502;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75552 76062 . + . ID=id-AFQR01000022.1:75552..76062;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75552 75735 . + . ID=id-AFQR01000022.1:75552..75735;Dbxref=InterPro:IPR001017,PFAM:PF00676;Note=e1_dh~dehydrogenase%2C e1 component;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75714 76848 . + . ID=id-AFQR01000022.1:75714..76848;Dbxref=InterPro:IPR005476,PFAM:PF02780;Note=superfamily~transketolase_c~transketolase%3B label: Transketolase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75732 76851 . + . ID=id-AFQR01000022.1:75732..76851;Dbxref=InterPro:IPR015941;Note=Gene3D:3.40.50.920~transketolase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75762 76830 . + . ID=id-AFQR01000022.1:75762..76830;Dbxref=InterPro:IPR009014;Note=superfamily:SSF52922~tk c-terminal domain-like~transketolase/pyruvate-ferredoxin oxidoreductase%2C domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75828 76335 . + . ID=id-AFQR01000022.1:75828..76335;Note=specific~superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75849 76320 . + . ID=id-AFQR01000022.1:75849..76320;Dbxref=InterPro:IPR005475,PFAM:PF02779;Note=transket_pyr~transketolase-like%2C pyrimidine-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75933 76311 . + . ID=id-AFQR01000022.1:75933..76311;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 75963 76251 . + . ID=id-AFQR01000022.1:75963..76251;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77262 77271 . - . ID=id-AFQR01000022.1:77262..77271;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 77295 78185 . - . ID=gene-GGE_1377;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank CDS 77295 78185 . - 0 ID=cds-EGT81191.1;Parent=gene-GGE_1377;Dbxref=GeneID:1170589,InterPro:IPR000092,InterPro:IPR008949,InterPro:IPR017446,PFAM:PF00348,NCBI_GP:EGT81191.1;Name=EGT81191.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||;locus_tag=GGE_1377;product=Farnesyl diphosphate synthase;protein_id=EGT81191.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77301 78162 . - . ID=id-GGE_1377;Dbxref=InterPro:IPR008949;Note=superfamily:SSF48576~terpenoid synthases~terpenoid synthase;gbkey=misc_feature;gene=ispA;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77304 78171 . - . ID=id-GGE_1377-2;Dbxref=InterPro:IPR008949;Note=Gene3D:1.10.600.10~terpenoid synthase;gbkey=misc_feature;gene=ispA;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77307 78147 . - . ID=id-GGE_1377-3;Dbxref=InterPro:IPR017446;Note=HMMPanther:PTHR12001:SF23~subfamily not named~HMMPanther:PTHR12001~family not named~polyprenyl synthetase-related;gbkey=misc_feature;gene=ispA;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77385 78090 . - . ID=id-GGE_1377-4;Note=specific~superfamily%3B label: Isoprenoid_Biosyn_C1 superfamily;gbkey=misc_feature;gene=ispA;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77394 78018 . - . ID=id-GGE_1377-5;Dbxref=InterPro:IPR000092,PFAM:PF00348;Note=polyprenyl_synt~polyprenyl synthetase;gbkey=misc_feature;gene=ispA;locus_tag=GGE_1377 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77325 77505 . + . ID=id-AFQR01000022.1:77325..77505;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77334 77940 . + . ID=id-AFQR01000022.1:77334..77940;Dbxref=InterPro:IPR000092;Note=PatternScan:PS00444~polyprenyl_synthase_2~polyprenyl synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 77346 77541 . + . ID=id-AFQR01000022.1:77346..77541;Dbxref=InterPro:IPR000092;Note=PatternScan:PS00723~polyprenyl_synthase_1~polyprenyl synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 78185 78442 . - . ID=gene-GGE_1378;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank CDS 78185 78442 . - 0 ID=cds-EGT81192.1;Parent=gene-GGE_1378;Dbxref=GeneID:166232383,InterPro:IPR003761,PFAM:PF02609,PIR:PIRSF006488,TIGRFAM:TIGR01280,NCBI_GP:EGT81192.1;Name=EGT81192.1;Ontology_term=GO:0006308,GO:0009318,GO:0008855;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||;go_function=exodeoxyribonuclease VII activity|0008855||;go_process=DNA catabolic process|0006308||;locus_tag=GGE_1378;product=Exodeoxyribonuclease 7 small subunit;protein_id=EGT81192.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78185 78440 . - . ID=id-GGE_1378;Dbxref=InterPro:IPR003761,PIR:PIRSF006488;Note=exodeoxyribonuclease vii%2C small subunit~exonuclease vii%2C small subunit;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78206 78419 . - . ID=id-GGE_1378-2;Note=superfamily%3B label: Exonuc_VII_S superfamily;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78206 78416 . - . ID=id-GGE_1378-3;Note=superfamily:SSF116842~xseb-like;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78206 78338 . - . ID=id-GGE_1378-4;Dbxref=InterPro:IPR003761;Note=BlastProDom:PD028235~q4qkg4_haei8_q4qkg4~exonuclease vii%2C small subunit;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78224 78392 . - . ID=id-GGE_1378-5;Dbxref=InterPro:IPR003761,TIGRFAM:TIGR01280;Note=xseb: exodeoxyribonuclease vii%2C small subuni~exonuclease vii%2C small subunit;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78233 78368 . - . ID=id-GGE_1378-6;Dbxref=InterPro:IPR003761;Note=HAMAP:MF_00337~exonuc_7_s~exonuclease vii%2C small subunit;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78236 78344 . - . ID=id-GGE_1378-7;Dbxref=InterPro:IPR003761,PFAM:PF02609;Note=exonuc_vii_s~exonuclease vii%2C small subunit;gbkey=misc_feature;gene=xseB;locus_tag=GGE_1378 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78251 78341 . + . ID=id-AFQR01000022.1:78251..78341;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 78583 78753 . + . ID=gene-GGE_1379;Name=GGE_1379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1379 GCA_000222085.2|AFQR01000022.1 Genbank CDS 78583 78753 . + 0 ID=cds-EGT81193.1;Parent=gene-GGE_1379;Dbxref=NCBI_GP:EGT81193.1;Name=EGT81193.1;Note=Hypothetical tHUMP domain-like;gbkey=CDS;locus_tag=GGE_1379;product=putative tHUMP domain-like protein;protein_id=EGT81193.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78583 78751 . + . ID=id-GGE_1379;Note=multi-dom%3B label: PRK01269;gbkey=misc_feature;locus_tag=GGE_1379 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78583 78742 . + . ID=id-GGE_1379-2;Note=superfamily:SSF143437~thump domain-like;gbkey=misc_feature;locus_tag=GGE_1379 GCA_000222085.2|AFQR01000022.1 Genbank gene 78692 80044 . + . ID=gene-GGE_1380;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank CDS 78692 80044 . + 0 ID=cds-EGT81194.1;Parent=gene-GGE_1380;Dbxref=GeneID:81335544,InterPro:IPR001763,InterPro:IPR003720,InterPro:IPR004114,InterPro:IPR014729,InterPro:IPR020536,PFAM:PF02568,PFAM:PF02926,TIGRFAM:TIGR00342,NCBI_GP:EGT81194.1;Name=EGT81194.1;Ontology_term=GO:0009228,GO:0005737,GO:0003723;gbkey=CDS;gene=thiI;go_component=cytoplasm|0005737||;go_function=RNA binding|0003723||;go_process=thiamine biosynthetic process|0009228||;locus_tag=GGE_1380;product=tRNA sulfurtransferase;protein_id=EGT81194.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78692 80042 . + . ID=id-GGE_1380;Dbxref=InterPro:IPR003720;Note=HAMAP:MF_00021~thii~thiamine biosynthesis protein;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78692 79715 . + . ID=id-GGE_1380-2;Dbxref=InterPro:IPR003720,TIGRFAM:TIGR00342;Note=tigr00342: thiamine biosynthesis/trna modif~thiamine biosynthesis protein;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78698 79100 . + . ID=id-GGE_1380-3;Note=superfamily:SSF143437~thump domain-like;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78767 79007 . + . ID=id-GGE_1380-4;Dbxref=InterPro:IPR004114;Note=ProfileScan:PS51165~thump~thump;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78815 78947 . + . ID=id-GGE_1380-5;Note=superfamily%3B label: THUMP superfamily;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78821 78941 . + . ID=id-GGE_1380-6;Dbxref=InterPro:IPR004114,PFAM:PF02926;Note=thump~thump;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79000 79009 . + . ID=id-GGE_1380-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79070 79214 . + . ID=id-GGE_1380-8;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79106 79289 . + . ID=id-GGE_1380-9;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79109 79274 . + . ID=id-GGE_1380-10;Dbxref=InterPro:IPR020536,PFAM:PF02568;Note=thii~thiamine biosynthesis protein;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79124 79214 . + . ID=id-GGE_1380-11;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79700 79709 . + . ID=id-GGE_1380-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=thiI;locus_tag=GGE_1380 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78725 79751 . - . ID=id-AFQR01000022.1:78725..79751;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78923 79799 . - . ID=id-AFQR01000022.1:78923..79799;Note=specific~superfamily%3B label: RHOD;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78932 79796 . - . ID=id-AFQR01000022.1:78932..79796;Dbxref=InterPro:IPR001763;Note=ProfileScan:PS50206~rhodanese_3~rhodanese-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 78938 79781 . - . ID=id-AFQR01000022.1:78938..79781;Dbxref=InterPro:IPR001763;Note=Gene3D:3.40.250.10~rhodanese-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 79025 79697 . - . ID=id-AFQR01000022.1:79025..79697;Dbxref=InterPro:IPR001763;Note=superfamily:SSF52821~rhodanese/cell cycle control phosphatase~rhodanese-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 80055 80375 . + . ID=gene-GGE_1381;Name=GGE_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1381 GCA_000222085.2|AFQR01000022.1 Genbank CDS 80055 80375 . + 0 ID=cds-EGT81195.1;Parent=gene-GGE_1381;Dbxref=GeneID:3183494,InterPro:IPR007384,InterPro:IPR023376,PFAM:PF04287,PIR:PIRSF006257,NCBI_GP:EGT81195.1;Name=EGT81195.1;Note=HI_1436;gbkey=CDS;locus_tag=GGE_1381;product=putative yqcC-like domain-containing protein;protein_id=EGT81195.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80055 80370 . + . ID=id-GGE_1381;Dbxref=InterPro:IPR007384,PIR:PIRSF006257;Note=uncharacterised conserved protein%2C ucp006257 type~protein of unknown function duf446;gbkey=misc_feature;locus_tag=GGE_1381 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80061 80358 . + . ID=id-GGE_1381-2;Dbxref=InterPro:IPR023376;Note=Gene3D:1.20.1440.40~yqcc-like domain;gbkey=misc_feature;locus_tag=GGE_1381 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80061 80319 . + . ID=id-GGE_1381-3;Note=superfamily%3B label: DUF446 superfamily;gbkey=misc_feature;locus_tag=GGE_1381 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80064 80349 . + . ID=id-GGE_1381-4;Dbxref=InterPro:IPR007384,PFAM:PF04287;Note=duf446~protein of unknown function duf446;gbkey=misc_feature;locus_tag=GGE_1381 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80091 80325 . - . ID=id-AFQR01000022.1:80091..80325;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 80369 81088 . + . ID=gene-GGE_1382;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=GGE_1382 GCA_000222085.2|AFQR01000022.1 Genbank CDS 80369 81088 . + 0 ID=cds-EGT81196.1;Parent=gene-GGE_1382;Dbxref=GeneID:2828514,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR020103,PFAM:PF00849,NCBI_GP:EGT81196.1;Name=EGT81196.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truC;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_1382;product=tRNA pseudouridine synthase C;protein_id=EGT81196.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80375 81080 . + . ID=id-GGE_1382;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=truC;locus_tag=GGE_1382 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80375 81077 . + . ID=id-GGE_1382-2;Note=HMMPanther:PTHR10436~rna pseudouridylate synthase family protein;gbkey=misc_feature;gene=truC;locus_tag=GGE_1382 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80375 81038 . + . ID=id-GGE_1382-3;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=truC;locus_tag=GGE_1382 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80402 80849 . + . ID=id-GGE_1382-4;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=truC;locus_tag=GGE_1382 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 80414 80519 . - . ID=id-AFQR01000022.1:80414..80519;Dbxref=InterPro:IPR006224;Note=PatternScan:PS01129~psi_rlu~pseudouridine synthase%2C rluc/rlud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 81081 81239 . + . ID=gene-GGE_1383;Name=GGE_1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1383 GCA_000222085.2|AFQR01000022.1 Genbank CDS 81081 81239 . + 0 ID=cds-EGT81197.1;Parent=gene-GGE_1383;Dbxref=GeneID:81335541,InterPro:IPR005371,PFAM:PF03701,NCBI_GP:EGT81197.1;Name=EGT81197.1;Note=NTHI1697;gbkey=CDS;locus_tag=GGE_1383;product=UPF0181 protein;protein_id=EGT81197.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81081 81231 . + . ID=id-GGE_1383;Dbxref=InterPro:IPR005371;Note=HAMAP:MF_00507~upf0181~uncharacterised protein family upf0181;gbkey=misc_feature;locus_tag=GGE_1383 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81081 81228 . + . ID=id-GGE_1383-2;Dbxref=InterPro:IPR005371,PFAM:PF03701;Note=upf0181~uncharacterised protein family upf0181;gbkey=misc_feature;locus_tag=GGE_1383 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81081 81225 . + . ID=id-GGE_1383-3;Dbxref=InterPro:IPR005371;Note=BlastProDom:PD026807~q4qkg0_haei8_q4qkg0~uncharacterised protein family upf0181;gbkey=misc_feature;locus_tag=GGE_1383 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81093 81222 . + . ID=id-GGE_1383-4;Note=superfamily%3B label: UPF0181 superfamily;gbkey=misc_feature;locus_tag=GGE_1383 GCA_000222085.2|AFQR01000022.1 Genbank gene 81384 81602 . + . ID=gene-GGE_1384;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank CDS 81384 81602 . + 0 ID=cds-EGT81198.1;Parent=gene-GGE_1384;Dbxref=GeneID:1169113,InterPro:IPR002059,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR012751,InterPro:IPR016027,InterPro:IPR019844,PFAM:PF00313,PIR:PIRSF002599,TIGRFAM:TIGR02381,NCBI_GP:EGT81198.1;Name=EGT81198.1;Ontology_term=GO:0006355,GO:0006950,GO:0005737,GO:0003677,GO:0003676;gbkey=CDS;gene=cspD;go_component=cytoplasm|0005737||;go_function=DNA binding|0003677||,nucleic acid binding|0003676||;go_process=regulation of transcription DNA-dependent|0006355||,response to stress|0006950||;locus_tag=GGE_1384;product=Cold shock-like protein CspD;protein_id=EGT81198.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81384 81588 . + . ID=id-GGE_1384;Dbxref=InterPro:IPR012156,InterPro:IPR012751,PIR:PIRSF002599,TIGRFAM:TIGR02381;Note=cspd: cold shock domain protein cspd~cspd%2C cold shock~cold shock protein%2C cspa type~cold shock%2C cspa;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81384 81585 . + . ID=id-GGE_1384-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81384 81579 . + . ID=id-GGE_1384-3;Note=HMMPanther:PTHR11544:SF12~subfamily not named~HMMPanther:PTHR11544~family not named;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81384 81576 . + . ID=id-GGE_1384-4;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81390 81576 . + . ID=id-GGE_1384-5;Dbxref=InterPro:IPR002059,PFAM:PF00313;Note=csd~cold-shock protein%2C dna-binding;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81396 81573 . + . ID=id-GGE_1384-6;Note=specific~superfamily%3B label: CSP_CDS;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81396 81432 . + . ID=id-GGE_1384-7;Dbxref=InterPro:IPR002059;Note=FPrintScan:PR00050~coldshock~cold-shock protein%2C dna-binding;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81429 81444 . + . ID=id-GGE_1384-8;Dbxref=InterPro:IPR019844;Note=PatternScan:PS00352~cold_shock~cold-shock conserved site;gbkey=misc_feature;gene=cspD;locus_tag=GGE_1384 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81414 81459 . - . ID=id-AFQR01000022.1:81414..81459;Dbxref=InterPro:IPR002059;Note=FPrintScan:PR00050~coldshock~cold-shock protein%2C dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81441 81504 . - . ID=id-AFQR01000022.1:81441..81504;Dbxref=InterPro:IPR002059;Note=FPrintScan:PR00050~coldshock~cold-shock protein%2C dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 81670 82116 . - . ID=gene-GGE_1385;Name=GGE_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1385 GCA_000222085.2|AFQR01000022.1 Genbank CDS 81670 82116 . - 0 ID=cds-EGT81199.1;Parent=gene-GGE_1385;Dbxref=GeneID:167012996,InterPro:IPR009390,PFAM:PF06303,NCBI_GP:EGT81199.1;Name=EGT81199.1;Note=CGSHiEE_04995;gbkey=CDS;locus_tag=GGE_1385;product=UPF0268 protein;protein_id=EGT81199.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81670 82114 . - . ID=id-GGE_1385;Dbxref=InterPro:IPR009390,PFAM:PF06303;Note=superfamily~HAMAP:MF_01073~upf0268~ter macrodomain organiser%2C mats-binding protein%2C matp~matp~ter macrodomain organiser%2C mats-binding protein%2C matp%3B label: MatP superfamily;gbkey=misc_feature;locus_tag=GGE_1385 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 81670 82057 . - . ID=id-GGE_1385-2;Dbxref=InterPro:IPR009390;Note=BlastProDom:PD033720~y1323_haein_p44161~ter macrodomain organiser%2C mats-binding protein%2C matp;gbkey=misc_feature;locus_tag=GGE_1385 GCA_000222085.2|AFQR01000022.1 Genbank gene 82243 84018 . + . ID=gene-GGE_1386;Name=GGE_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1386 GCA_000222085.2|AFQR01000022.1 Genbank CDS 82243 84018 . + 0 ID=cds-EGT81200.1;Parent=gene-GGE_1386;Dbxref=GeneID:1170810,InterPro:IPR001984,InterPro:IPR008268,InterPro:IPR008269,InterPro:IPR020568,PFAM:PF05362,NCBI_GP:EGT81200.1;Name=EGT81200.1;Note=HI_1324;Ontology_term=GO:0006508,GO:0004176,GO:0004252;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_1386;product=Putative Lon protease;protein_id=EGT81200.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82243 83992 . + . ID=id-GGE_1386;Note=multi-dom%3B label: LonB;gbkey=misc_feature;locus_tag=GGE_1386 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 83020 83173 . + . ID=id-GGE_1386-2;Note=HMMPanther:PTHR10046~atp dependent lon protease family member;gbkey=misc_feature;locus_tag=GGE_1386 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 83812 83821 . + . ID=id-GGE_1386-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1386 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82270 83569 . - . ID=id-AFQR01000022.1:82270..83569;Dbxref=InterPro:IPR008268;Note=PatternScan:PS01046~lon_ser~peptidase s16%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82282 82900 . - . ID=id-AFQR01000022.1:82282..82900;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82294 83311 . - . ID=id-AFQR01000022.1:82294..83311;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82303 83650 . - . ID=id-AFQR01000022.1:82303..83650;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82303 83560 . - . ID=id-AFQR01000022.1:82303..83560;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82540 83569 . - . ID=id-AFQR01000022.1:82540..83569;Note=superfamily%3B label: Lon_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82546 83569 . - . ID=id-AFQR01000022.1:82546..83569;Dbxref=InterPro:IPR008269,PFAM:PF05362;Note=lon_c~peptidase s16%2C lon c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 82840 83302 . - . ID=id-AFQR01000022.1:82840..83302;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 84135 84719 . + . ID=gene-GGE_1387;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank CDS 84135 84719 . + 0 ID=cds-EGT81201.1;Parent=gene-GGE_1387;Dbxref=GeneID:1169588,InterPro:IPR000794,InterPro:IPR010083,InterPro:IPR013114,PFAM:PF07977,TIGRFAM:TIGR01749,NCBI_GP:EGT81201.1;Name=EGT81201.1;Ontology_term=GO:0009058,GO:0006633,GO:0005737,GO:0008693,GO:0003824;gbkey=CDS;gene=fabA;go_component=cytoplasm|0005737||;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||,catalytic activity|0003824||;go_process=biosynthetic process|0009058||,fatty acid biosynthetic process|0006633||;locus_tag=GGE_1387;product=3-hydroxydecanoyl-acyl-carrier-protein dehydratase;protein_id=EGT81201.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84207 84648 . + . ID=id-GGE_1387;Dbxref=InterPro:IPR010083;Note=HAMAP:MF_00405~faba~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase faba~superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84210 84639 . + . ID=id-GGE_1387-2;Dbxref=InterPro:IPR000794;Note=HMMPanther:PTHR11712:SF23~3-oxoacyl-[acyl-carrier-protein] synthase~HMMPanther:PTHR11712~family not named~beta-ketoacyl synthase;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84213 84642 . + . ID=id-GGE_1387-3;Dbxref=InterPro:IPR010083,TIGRFAM:TIGR01749;Note=faba: beta-hydroxyacyl-(acyl-carrier-protein~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase faba;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84213 84633 . + . ID=id-GGE_1387-4;Note=Gene3D:3.10.129.10;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84282 84561 . + . ID=id-GGE_1387-5;Note=specific~superfamily%3B label: FabA;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84288 84525 . + . ID=id-GGE_1387-6;Dbxref=InterPro:IPR013114,PFAM:PF07977;Note=faba~beta-hydroxyacyl-(acyl-carrier-protein) dehydratase%2C faba/fabz;gbkey=misc_feature;gene=fabA;locus_tag=GGE_1387 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84192 84477 . - . ID=id-AFQR01000022.1:84192..84477;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84867 85104 . - . ID=id-AFQR01000022.1:84867..85104;Dbxref=InterPro:IPR010835,PFAM:PF07273;Note=duf1439~protein of unknown function duf1439;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 84870 85101 . - . ID=id-AFQR01000022.1:84870..85101;Note=superfamily%3B label: DUF1439 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 85170 85389 . - . ID=id-AFQR01000022.1:85170..85389;Dbxref=InterPro:IPR010835,PFAM:PF07273;Note=duf1439~protein of unknown function duf1439;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 85176 85203 . - . ID=id-AFQR01000022.1:85176..85203;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 85209 85356 . - . ID=id-AFQR01000022.1:85209..85356;Note=superfamily%3B label: DUF1439 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 85474 86196 . + . ID=gene-GGE_1388;Name=GGE_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1388 GCA_000222085.2|AFQR01000022.1 Genbank CDS 85474 86196 . + 0 ID=cds-EGT81202.1;Parent=gene-GGE_1388;Dbxref=GeneID:229845149,InterPro:IPR011009,NCBI_GP:EGT81202.1;Name=EGT81202.1;Note=ZP_04465284;gbkey=CDS;locus_tag=GGE_1388;product=Hypothetical protein;protein_id=EGT81202.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 85474 86182 . + . ID=id-GGE_1388;Dbxref=InterPro:IPR011009;Note=superfamily:SSF56112~protein kinase-like (pk-like)~protein kinase-like domain;gbkey=misc_feature;locus_tag=GGE_1388 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 85627 85735 . + . ID=id-GGE_1388-2;Note=superfamily%3B label: PKc_like superfamily;gbkey=misc_feature;locus_tag=GGE_1388 GCA_000222085.2|AFQR01000022.1 Genbank gene 86196 86330 . + . ID=gene-GGE_1389;Name=GGE_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1389 GCA_000222085.2|AFQR01000022.1 Genbank CDS 86196 86330 . + 0 ID=cds-EGT81203.1;Parent=gene-GGE_1389;Dbxref=NCBI_GP:EGT81203.1;Name=EGT81203.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_1389;product=putative lipoprotein;protein_id=EGT81203.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86196 86247 . + . ID=id-GGE_1389;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1389 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86211 86265 . + . ID=id-GGE_1389-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1389 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86253 86268 . + . ID=id-GGE_1389-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1389 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86339 86348 . + . ID=id-AFQR01000022.1:86339..86348;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 86696 87151 . + . ID=gene-GGE_1390;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank CDS 86696 87151 . + 0 ID=cds-EGT81204.1;Parent=gene-GGE_1390;Dbxref=GeneID:34223728,InterPro:IPR003728,PFAM:PF02576,NCBI_GP:EGT81204.1;Name=EGT81204.1;gbkey=CDS;gene=rimP;locus_tag=GGE_1390;product=Ribosome maturation factor rimP;protein_id=EGT81204.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86696 86945 . + . ID=id-GGE_1390;Note=superfamily:SSF75420~yhbc-like domain;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86702 87146 . + . ID=id-GGE_1390-2;Note=multi-dom%3B label: PRK00092;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86705 86930 . + . ID=id-GGE_1390-3;Note=Gene3D:3.30.300.70;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86714 87134 . + . ID=id-GGE_1390-4;Dbxref=InterPro:IPR003728;Note=HAMAP:MF_01077~rimp~ribosome maturation factor rimp;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86732 87104 . + . ID=id-GGE_1390-5;Dbxref=InterPro:IPR003728,PFAM:PF02576;Note=duf150~ribosome maturation factor rimp;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86756 86933 . + . ID=id-GGE_1390-6;Note=superfamily%3B label: Sm_like superfamily;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86915 86933 . + . ID=id-GGE_1390-7;Note=superfamily%3B label: Sm_like superfamily;gbkey=misc_feature;gene=rimP;locus_tag=GGE_1390 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86870 86969 . - . ID=id-AFQR01000022.1:86870..86969;Note=Gene3D:2.30.30.180;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 86900 86948 . - . ID=id-AFQR01000022.1:86900..86948;Note=superfamily:SSF74942~yhbc-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 87169 88656 . + . ID=gene-GGE_1391;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank CDS 87169 88656 . + 0 ID=cds-EGT81205.1;Parent=gene-GGE_1391;Dbxref=GeneID:1171872,InterPro:IPR003029,InterPro:IPR004088,InterPro:IPR009019,InterPro:IPR010213,InterPro:IPR010214,InterPro:IPR010995,InterPro:IPR012340,InterPro:IPR013735,InterPro:IPR015946,InterPro:IPR016027,PFAM:PF00575,PFAM:PF08529,TIGRFAM:TIGR01953,TIGRFAM:TIGR01954,NCBI_GP:EGT81205.1;Name=EGT81205.1;Ontology_term=GO:0031554,GO:0003723,GO:0000166,GO:0003700,GO:0030528;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||,nucleotide binding|0000166||,sequence-specific DNA binding transcription factor activity|0003700||,transcription regulator activity|0030528||;go_process=regulation of transcription termination DNA-dependent|0031554||;locus_tag=GGE_1391;product=Transcription elongation protein nusA;protein_id=EGT81205.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87169 88588 . + . ID=id-GGE_1391;Note=multi-dom%3B label: nusA;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87169 88486 . + . ID=id-GGE_1391-2;Note=HMMPanther:PTHR22648~family not named;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87169 87547 . + . ID=id-GGE_1391-3;Dbxref=InterPro:IPR013735;Note=superfamily:SSF69705~transcription factor nusa domain~transcription factor nusa;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87169 87541 . + . ID=id-GGE_1391-4;Dbxref=InterPro:IPR013735;Note=Gene3D:3.30.1480.10~transcription factor nusa;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87181 88189 . + . ID=id-GGE_1391-5;Dbxref=InterPro:IPR010213,TIGRFAM:TIGR01953;Note=nusa: transcription termination factor~transcription termination factor nusa;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87181 87535 . + . ID=id-GGE_1391-6;Note=superfamily%3B label: NusA_N superfamily;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87181 87532 . + . ID=id-GGE_1391-7;Dbxref=InterPro:IPR013735,PFAM:PF08529;Note=nusa_n~transcription factor nusa;gbkey=misc_feature;gene=nusA;locus_tag=GGE_1391 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87205 88357 . - . ID=id-AFQR01000022.1:87205..88357;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87226 88402 . - . ID=id-AFQR01000022.1:87226..88402;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87235 88381 . - . ID=id-AFQR01000022.1:87235..88381;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87262 88264 . - . ID=id-AFQR01000022.1:87262..88264;Note=superfamily%3B label: nusA_Cterm_rpt superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87319 88492 . - . ID=id-AFQR01000022.1:87319..88492;Dbxref=InterPro:IPR010214,TIGRFAM:TIGR01954;Note=superfamily~nusa_cterm_rpt: transcription terminat~transcription termination factor nusa duplication%3B label: nusA_Cterm_rpt superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87322 88264 . - . ID=id-AFQR01000022.1:87322..88264;Dbxref=InterPro:IPR010214,TIGRFAM:TIGR01954;Note=nusa_cterm_rpt: transcription terminat~transcription termination factor nusa duplication;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87346 88468 . - . ID=id-AFQR01000022.1:87346..88468;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87349 88009 . - . ID=id-AFQR01000022.1:87349..88009;Note=specific~superfamily%3B label: KH-I superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87358 87574 . - . ID=id-AFQR01000022.1:87358..87574;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87364 88003 . - . ID=id-AFQR01000022.1:87364..88003;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~ky domain-like%2C alpha/beta;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87364 87565 . - . ID=id-AFQR01000022.1:87364..87565;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87367 88006 . - . ID=id-AFQR01000022.1:87367..88006;Dbxref=InterPro:IPR009019;Note=superfamily:SSF54814~prokaryotic type kh domain (kh-domain type ii)~k homology%2C prokaryotic type;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87367 87574 . - . ID=id-AFQR01000022.1:87367..87574;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87367 87571 . - . ID=id-AFQR01000022.1:87367..87571;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87373 88453 . - . ID=id-AFQR01000022.1:87373..88453;Dbxref=InterPro:IPR010995;Note=superfamily:SSF47794~rad51 n-terminal domain-like~dna repair rad51/transcription factor nusa%2C alpha-helical;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87373 88231 . - . ID=id-AFQR01000022.1:87373..88231;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87376 87562 . - . ID=id-AFQR01000022.1:87376..87562;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87382 88213 . - . ID=id-AFQR01000022.1:87382..88213;Dbxref=InterPro:IPR010995;Note=superfamily:SSF47794~rad51 n-terminal domain-like~dna repair rad51/transcription factor nusa%2C alpha-helical;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87388 88075 . - . ID=id-AFQR01000022.1:87388..88075;Dbxref=InterPro:IPR004088;Note=ProfileScan:PS50084~kh_type_1~k homology%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87403 87769 . - . ID=id-AFQR01000022.1:87403..87769;Dbxref=InterPro:IPR009019;Note=superfamily:SSF54814~prokaryotic type kh domain (kh-domain type ii)~k homology%2C prokaryotic type;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 87406 87766 . - . ID=id-AFQR01000022.1:87406..87766;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~ky domain-like%2C alpha/beta;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 88668 91202 . + . ID=gene-GGE_1392;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank CDS 88668 91202 . + 0 ID=cds-EGT81206.1;Parent=gene-GGE_1392;Dbxref=GeneID:81335418,InterPro:IPR000178,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006847,InterPro:IPR009000,InterPro:IPR013575,InterPro:IPR015760,InterPro:IPR023115,PFAM:PF00009,PFAM:PF03144,PFAM:PF04760,PFAM:PF08364,PFAM:PF11987,TIGRFAM:TIGR00231,TIGRFAM:TIGR00487,NCBI_GP:EGT81206.1;Name=EGT81206.1;Ontology_term=GO:0006413,GO:0005622,GO:0005525,GO:0003924,GO:0003743;gbkey=CDS;gene=infB;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,GTPase activity|0003924||,translation initiation factor activity|0003743||;go_process=translational initiation|0006413||;locus_tag=GGE_1392;product=Translation initiation factor IF-2;protein_id=EGT81206.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88695 88785 . + . ID=id-GGE_1392;Dbxref=InterPro:IPR013575,PFAM:PF08364;Note=if2_assoc~initiation factor 2 associated domain%2C bacterial;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88794 88848 . + . ID=id-GGE_1392-2;Note=coiled-coil;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88818 88854 . + . ID=id-GGE_1392-3;Note=seg;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88992 89001 . + . ID=id-GGE_1392-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89052 90795 . + . ID=id-GGE_1392-5;Dbxref=InterPro:IPR015760;Note=HMMPanther:PTHR23115:SF41~translation initiation factor if-2~translation initiation factor if- 2~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89445 90426 . + . ID=id-GGE_1392-6;Dbxref=InterPro:IPR000178,TIGRFAM:TIGR00487;Note=multi-dom~if-2: translation initiation factor if-2~translation initiation factor aif-2%2C bacterial-like%3B label: IF-2;gbkey=misc_feature;gene=infB;locus_tag=GGE_1392 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88704 90681 . - . ID=id-AFQR01000022.1:88704..90681;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88713 88725 . - . ID=id-AFQR01000022.1:88713..88725;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88716 89367 . - . ID=id-AFQR01000022.1:88716..89367;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88716 89316 . - . ID=id-AFQR01000022.1:88716..89316;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88725 89157 . - . ID=id-AFQR01000022.1:88725..89157;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88737 91053 . - . ID=id-AFQR01000022.1:88737..91053;Dbxref=InterPro:IPR000178;Note=PatternScan:PS01176~if2~translation initiation factor aif-2%2C bacterial-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88746 89232 . - . ID=id-AFQR01000022.1:88746..89232;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88791 89037 . - . ID=id-AFQR01000022.1:88791..89037;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88791 89034 . - . ID=id-AFQR01000022.1:88791..89034;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88821 89472 . - . ID=id-AFQR01000022.1:88821..89472;Dbxref=InterPro:IPR006847,PFAM:PF04760;Note=superfamily~if2_n~translation initiation factor if-2%3B label: IF2_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88851 90270 . - . ID=id-AFQR01000022.1:88851..90270;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88872 90963 . - . ID=id-AFQR01000022.1:88872..90963;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88908 90600 . - . ID=id-AFQR01000022.1:88908..90600;Dbxref=InterPro:IPR023115;Note=Gene3D:3.40.50.10050~translation initiation factor if- 2%2C domain 3;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88920 90921 . - . ID=id-AFQR01000022.1:88920..90921;Note=specific~superfamily%3B label: mtIF2_IVc;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88923 90216 . - . ID=id-AFQR01000022.1:88923..90216;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88947 90219 . - . ID=id-AFQR01000022.1:88947..90219;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88950 90228 . - . ID=id-AFQR01000022.1:88950..90228;Note=specific~superfamily%3B label: IF2_mtIF2_II;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88962 90906 . - . ID=id-AFQR01000022.1:88962..90906;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88965 90903 . - . ID=id-AFQR01000022.1:88965..90903;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88989 90552 . - . ID=id-AFQR01000022.1:88989..90552;Dbxref=InterPro:IPR023115,PFAM:PF11987;Note=if-2~translation initiation factor if- 2%2C domain 3;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 88995 90549 . - . ID=id-AFQR01000022.1:88995..90549;Note=superfamily%3B label: IF-2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89064 90528 . - . ID=id-AFQR01000022.1:89064..90528;Dbxref=InterPro:IPR023115;Note=superfamily:SSF52156~initiation factor if2/eif5b%2C domain 3~translation initiation factor if- 2%2C domain 3;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89148 89706 . - . ID=id-AFQR01000022.1:89148..89706;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89157 89697 . - . ID=id-AFQR01000022.1:89157..89697;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89163 89706 . - . ID=id-AFQR01000022.1:89163..89706;Note=specific~superfamily%3B label: IF2_eIF5B;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89163 89688 . - . ID=id-AFQR01000022.1:89163..89688;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 89256 89688 . - . ID=id-AFQR01000022.1:89256..89688;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 91281 94460 . - . ID=gene-GGE_1393;Name=GGE_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank CDS 91281 94460 . - 0 ID=cds-EGT81207.1;Parent=gene-GGE_1393;Dbxref=GeneID:12644557,InterPro:IPR001650,InterPro:IPR004473,InterPro:IPR006935,InterPro:IPR007409,InterPro:IPR014001,InterPro:IPR021810,PFAM:PF04313,PFAM:PF04851,PFAM:PF11867,TIGRFAM:TIGR00348,NCBI_GP:EGT81207.1;Name=EGT81207.1;Note=HI_1285;Ontology_term=GO:0006304,GO:0009307,GO:0005524,GO:0003677,GO:0009035,GO:0004519,GO:0004386,GO:0016787,GO:0003676;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,Type I site-specific deoxyribonuclease activity|0009035||,endonuclease activity|0004519||,helicase activity|0004386||,hydrolase activity|0016787||,nucleic acid binding|0003676||;go_process=DNA modification|0006304||,DNA restriction-modification system|0009307||;locus_tag=GGE_1393;product=Putative type I restriction enzyme HindVIIP R protein;protein_id=EGT81207.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91287 91917 . - . ID=id-GGE_1393;Dbxref=InterPro:IPR007409,PFAM:PF04313;Note=hsdr_n~restriction endonuclease%2C type i%2C hsdr;gbkey=misc_feature;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91293 93387 . - . ID=id-GGE_1393-2;Dbxref=InterPro:IPR004473,TIGRFAM:TIGR00348;Note=multi-dom~hsdr: type i site-specific deoxyribonuclease~restriction endonuclease%2C type i%2C hsdr%3B label: hsdR;gbkey=misc_feature;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91932 92109 . - . ID=id-GGE_1393-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 92175 92628 . - . ID=id-GGE_1393-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 94266 94275 . - . ID=id-GGE_1393-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1393 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91326 94152 . + . ID=id-AFQR01000022.1:91326..94152;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91347 92766 . + . ID=id-AFQR01000022.1:91347..92766;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91557 91653 . + . ID=id-AFQR01000022.1:91557..91653;Note=superfamily%3B label: HSDR_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91752 92178 . + . ID=id-AFQR01000022.1:91752..92178;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91803 92901 . + . ID=id-AFQR01000022.1:91803..92901;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91803 92130 . + . ID=id-AFQR01000022.1:91803..92130;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 91827 92157 . + . ID=id-AFQR01000022.1:91827..92157;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 92352 93381 . + . ID=id-AFQR01000022.1:92352..93381;Dbxref=InterPro:IPR021810,PFAM:PF11867;Note=duf3387~protein of unknown function duf3387;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 92355 93381 . + . ID=id-AFQR01000022.1:92355..93381;Note=superfamily%3B label: DUF3387 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 95265 96680 . - . ID=gene-GGE_1394;Name=GGE_1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1394 GCA_000222085.2|AFQR01000022.1 Genbank CDS 95265 96680 . - 0 ID=cds-EGT81208.1;Parent=gene-GGE_1394;Dbxref=GeneID:294788778,InterPro:IPR000055,PFAM:PF01420,NCBI_GP:EGT81208.1;Name=EGT81208.1;Note=ZP_06754019;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA modification|0006304||;locus_tag=GGE_1394;product=type I restriction/modification specificity protein;protein_id=EGT81208.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95265 95841 . - . ID=id-GGE_1394;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature;locus_tag=GGE_1394 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95271 95898 . - . ID=id-GGE_1394-2;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature;locus_tag=GGE_1394 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95271 95838 . - . ID=id-GGE_1394-3;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_1394 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95277 96666 . - . ID=id-GGE_1394-4;Note=multi-dom%3B label: HsdS;gbkey=misc_feature;locus_tag=GGE_1394 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95283 95631 . + . ID=id-AFQR01000022.1:95283..95631;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95721 96087 . + . ID=id-AFQR01000022.1:95721..96087;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95724 96087 . + . ID=id-AFQR01000022.1:95724..96087;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95907 96039 . + . ID=id-AFQR01000022.1:95907..96039;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 95950 95959 . + . ID=id-AFQR01000022.1:95950..95959;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 96673 98349 . - . ID=gene-GGE_1395;Name=GGE_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1395 GCA_000222085.2|AFQR01000022.1 Genbank CDS 96673 98349 . - 0 ID=cds-EGT81209.1;Parent=gene-GGE_1395;Dbxref=GeneID:68250154,InterPro:IPR002296,InterPro:IPR003356,InterPro:IPR022749,PFAM:PF02384,PFAM:PF12161,NCBI_GP:EGT81209.1;Name=EGT81209.1;Note=YP_249266;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_1395;product=putative type I restriction enzyme HindVIIP M protein;protein_id=EGT81209.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96745 98278 . - . ID=id-GGE_1395;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1395 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96751 97153 . - . ID=id-GGE_1395-2;Dbxref=InterPro:IPR022749,PFAM:PF12161;Note=hsdm_n~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature;locus_tag=GGE_1395 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96751 96772 . - . ID=id-GGE_1395-3;Note=superfamily%3B label: HsdM_N superfamily;gbkey=misc_feature;locus_tag=GGE_1395 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 97294 97612 . - . ID=id-GGE_1395-4;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=multi-dom~n6_mtase~dna methylase%2C adenine-specific%3B label: N6_Mtase;gbkey=misc_feature;locus_tag=GGE_1395 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96712 97657 . + . ID=id-AFQR01000022.1:96712..97657;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96712 96946 . + . ID=id-AFQR01000022.1:96712..96946;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96718 97435 . + . ID=id-AFQR01000022.1:96718..97435;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96724 97366 . + . ID=id-AFQR01000022.1:96724..97366;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96739 98254 . + . ID=id-AFQR01000022.1:96739..98254;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 96748 97759 . + . ID=id-AFQR01000022.1:96748..97759;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 97318 97372 . + . ID=id-AFQR01000022.1:97318..97372;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98089 98098 . + . ID=id-AFQR01000022.1:98089..98098;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 98514 98900 . + . ID=gene-GGE_1396;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank CDS 98514 98900 . + 0 ID=cds-EGT81210.1;Parent=gene-GGE_1396;Dbxref=GeneID:166218442,InterPro:IPR000238,InterPro:IPR015946,InterPro:IPR020053,PFAM:PF02033,TIGRFAM:TIGR00082,NCBI_GP:EGT81210.1;Name=EGT81210.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||;locus_tag=GGE_1396;product=Ribosome-binding factor A;protein_id=EGT81210.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98514 98880 . + . ID=id-GGE_1396;Note=superfamily%3B label: RBFA superfamily;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98514 98868 . + . ID=id-GGE_1396-2;Dbxref=InterPro:IPR000238,TIGRFAM:TIGR00082;Note=rbfa: ribosome-binding factor a~ribosome-binding factor a;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98514 98835 . + . ID=id-GGE_1396-3;Dbxref=InterPro:IPR000238;Note=superfamily:SSF89919~ribosome-binding factor a%2C rbfa~ribosome-binding factor a;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98514 98832 . + . ID=id-GGE_1396-4;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~ky domain-like%2C alpha/beta;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98523 98865 . + . ID=id-GGE_1396-5;Dbxref=InterPro:IPR000238;Note=HAMAP:MF_00003~rbfa~ribosome-binding factor a;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98535 98829 . + . ID=id-GGE_1396-6;Dbxref=InterPro:IPR000238,PFAM:PF02033;Note=rbfa~ribosome-binding factor a;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98541 98787 . + . ID=id-GGE_1396-7;Dbxref=InterPro:IPR000238;Note=BlastProDom:PD007327~q4qk42_haei8_q4qk42~ribosome-binding factor a;gbkey=misc_feature;gene=rbfA;locus_tag=GGE_1396 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98580 98748 . - . ID=id-AFQR01000022.1:98580..98748;Dbxref=InterPro:IPR020053;Note=PatternScan:PS01319~rbfa~ribosome-binding factor a%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 98900 99820 . + . ID=gene-GGE_1397;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank CDS 98900 99820 . + 0 ID=cds-EGT81211.1;Parent=gene-GGE_1397;Dbxref=GeneID:189036486,InterPro:IPR002501,InterPro:IPR014780,InterPro:IPR015240,InterPro:IPR015947,InterPro:IPR020103,PFAM:PF01509,PFAM:PF09157,TIGRFAM:TIGR00431,NCBI_GP:EGT81211.1;Name=EGT81211.1;Ontology_term=GO:0009451,GO:0006396,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,RNA processing|0006396||,pseudouridine synthesis|0001522||;locus_tag=GGE_1397;product=tRNA pseudouridine synthase B;protein_id=EGT81211.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98900 99791 . + . ID=id-GGE_1397;Note=HMMPanther:PTHR13767:SF2~subfamily not named~HMMPanther:PTHR13767~family not named;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98909 99812 . + . ID=id-GGE_1397-2;Note=multi-dom%3B label: truB;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98927 99608 . + . ID=id-GGE_1397-3;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98933 99776 . + . ID=id-GGE_1397-4;Dbxref=InterPro:IPR014780;Note=HAMAP:MF_01080~trub_bact~trna pseudouridine synthase ii%2C trub;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98933 99527 . + . ID=id-GGE_1397-5;Dbxref=InterPro:IPR014780,TIGRFAM:TIGR00431;Note=trub: trna pseudouridine synthase b~trna pseudouridine synthase ii%2C trub;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98939 99737 . + . ID=id-GGE_1397-6;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 98999 99344 . + . ID=id-GGE_1397-7;Dbxref=InterPro:IPR002501,PFAM:PF01509;Note=trub_n~pseudouridine synthase ii;gbkey=misc_feature;gene=truB;locus_tag=GGE_1397 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99071 99638 . - . ID=id-AFQR01000022.1:99071..99638;Dbxref=InterPro:IPR015240,PFAM:PF09157;Note=trub-c_2~trna pseudouridine synthase ii%2C trub%2C subfamily 1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99083 99635 . - . ID=id-AFQR01000022.1:99083..99635;Dbxref=InterPro:IPR015947;Note=superfamily:SSF88697~pua domain-like~pseudouridine synthase/archaeosine transglycosylase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 99910 101034 . + . ID=gene-GGE_1398;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank CDS 99910 101034 . + 0 ID=cds-EGT81212.1;Parent=gene-GGE_1398;Dbxref=GeneID:1174832,InterPro:IPR002701,InterPro:IPR003099,InterPro:IPR008244,InterPro:IPR008927,InterPro:IPR011277,InterPro:IPR016040,InterPro:IPR020822,PFAM:PF01817,PFAM:PF02153,PIR:PIRSF001499,TIGRFAM:TIGR01799,NCBI_GP:EGT81212.1;Name=EGT81212.1;Ontology_term=GO:0046417,GO:0008152,GO:0055114,GO:0006571,GO:0005737,GO:0005488,GO:0003824,GO:0004106,GO:0016491,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_component=cytoplasm|0005737||;go_function=binding|0005488||,catalytic activity|0003824||,chorismate mutase activity|0004106||,oxidoreductase activity|0016491||,prephenate dehydrogenase (NADP+) activity|0004665||,prephenate dehydrogenase activity|0008977||;go_process=chorismate metabolic process|0046417||,metabolic process|0008152||,oxidation-reduction process|0055114||,tyrosine biosynthetic process|0006571||;locus_tag=GGE_1398;product=T-protein;protein_id=EGT81212.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99910 101032 . + . ID=id-GGE_1398;Dbxref=InterPro:IPR008244,PIR:PIRSF001499;Note=multi-dom~bifunctional chorismate mutase/prephenate dehydrogenase (t-protein)~bifunctional chorismate mutase/prephenate dehydrogenase t-protein%3B label: tyrA;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99910 100177 . + . ID=id-GGE_1398-2;Dbxref=InterPro:IPR002701;Note=ProfileScan:PS51168~chorismate_mut_2~chorismate mutase;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99910 100156 . + . ID=id-GGE_1398-3;Dbxref=InterPro:IPR002701;Note=Gene3D:1.20.59.10~chorismate mutase;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99922 100159 . + . ID=id-GGE_1398-4;Dbxref=InterPro:IPR011277,TIGRFAM:TIGR01799;Note=superfamily~cm_t: chorismate mutase~chorismate mutase%2C t-protein%3B label: CM_2 superfamily;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99922 99976 . + . ID=id-GGE_1398-5;Note=coiled-coil;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99934 100153 . + . ID=id-GGE_1398-6;Dbxref=InterPro:IPR020822,PFAM:PF01817;Note=cm_2~chorismate mutase%2C type ii;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 99943 100432 . + . ID=id-GGE_1398-7;Dbxref=InterPro:IPR020822;Note=superfamily:SSF48600~chorismate mutase ii~chorismate mutase%2C type ii;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100159 100405 . + . ID=id-GGE_1398-8;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100174 100762 . + . ID=id-GGE_1398-9;Note=HMMPanther:PTHR21363~family not named;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100204 100702 . + . ID=id-GGE_1398-10;Dbxref=InterPro:IPR003099;Note=ProfileScan:PS51176~pdh_adh~prephenate dehydrogenase;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100324 100528 . + . ID=id-GGE_1398-11;Dbxref=InterPro:IPR003099,PFAM:PF02153;Note=pdh~prephenate dehydrogenase;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100327 100615 . + . ID=id-GGE_1398-12;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=tyrA;locus_tag=GGE_1398 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100117 100210 . - . ID=id-AFQR01000022.1:100117..100210;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100249 100633 . - . ID=id-AFQR01000022.1:100249..100633;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 100285 100654 . - . ID=id-AFQR01000022.1:100285..100654;Note=Gene3D:1.10.3660.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101037 101046 . + . ID=id-AFQR01000022.1:101037..101046;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 101070 101951 . - . ID=gene-GGE_1399;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank CDS 101070 101951 . - 0 ID=cds-EGT81213.1;Parent=gene-GGE_1399;Dbxref=GeneID:1175604,InterPro:IPR016428,InterPro:IPR020602,PFAM:PF01227,PIR:PIRSF004750,TIGRFAM:TIGR03138,NCBI_GP:EGT81213.1;Name=EGT81213.1;Ontology_term=GO:0055114,GO:0008616,GO:0005737,GO:0046857;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||;go_function=oxidoreductase activity acting on other nitrogenous compounds as donors with NAD or NADP as acceptor|0046857||;go_process=oxidation-reduction process|0055114||,queuosine biosynthetic process|0008616||;locus_tag=GGE_1399;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=EGT81213.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101070 101949 . - . ID=id-GGE_1399;Dbxref=InterPro:IPR016428;Note=HAMAP:MF_00817~quef_type2~nitrile oxidoreductase%2C nadph-dependent%2C yqcd;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101115 101907 . - . ID=id-GGE_1399-2;Dbxref=InterPro:IPR016428,PIR:PIRSF004750;Note=predicted nadph-dependent nitrile oxidoreductase%2C yqcd type~nitrile oxidoreductase%2C nadph-dependent%2C yqcd;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101115 101475 . - . ID=id-GGE_1399-3;Note=superfamily%3B label: COG2904 superfamily;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101130 101892 . - . ID=id-GGE_1399-4;Dbxref=InterPro:IPR016428,TIGRFAM:TIGR03138;Note=quef: queuine synthase~nitrile oxidoreductase%2C nadph-dependent%2C yqcd;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101133 101889 . - . ID=id-GGE_1399-5;Note=multi-dom%3B label: queF;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101169 101415 . - . ID=id-GGE_1399-6;Note=Gene3D:3.30.1130.10;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101524 101533 . - . ID=id-GGE_1399-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=queF;locus_tag=GGE_1399 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101286 101691 . + . ID=id-AFQR01000022.1:101286..101691;Dbxref=InterPro:IPR020602,PFAM:PF01227;Note=gtp_cyclohydroi~gtp cyclohydrolase i/nitrile oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101355 101667 . + . ID=id-AFQR01000022.1:101355..101667;Note=superfamily:SSF55620~tetrahydrobiopterin biosynthesis enzyme-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101481 101541 . + . ID=id-AFQR01000022.1:101481..101541;Note=Gene3D:3.30.1130.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101496 101526 . + . ID=id-AFQR01000022.1:101496..101526;Note=superfamily%3B label: TFold superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101829 101838 . + . ID=id-AFQR01000022.1:101829..101838;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 101964 102749 . - . ID=gene-GGE_1400;Name=GGE_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1400 GCA_000222085.2|AFQR01000022.1 Genbank CDS 101964 102749 . - 0 ID=cds-EGT81214.1;Parent=gene-GGE_1400;Dbxref=InterPro:IPR016908,PFAM:PF10071,PIR:PIRSF029037,NCBI_GP:EGT81214.1;Name=EGT81214.1;Note=HI_1292;gbkey=CDS;locus_tag=GGE_1400;product=putative uncharacterized;protein_id=EGT81214.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101964 102747 . - . ID=id-GGE_1400;Dbxref=InterPro:IPR016908,PIR:PIRSF029037;Note=superfamily~predicted zn-ribbon-containing protein%2C hi1292 type~uncharacterised conserved protein ucp029037%3B label: DUF2310 superfamily;gbkey=misc_feature;locus_tag=GGE_1400 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101964 102744 . - . ID=id-GGE_1400-2;Dbxref=InterPro:IPR016908,PFAM:PF10071;Note=duf2310~uncharacterised conserved protein ucp029037;gbkey=misc_feature;locus_tag=GGE_1400 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 101994 102030 . - . ID=id-GGE_1400-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1400 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 102488 102497 . - . ID=id-GGE_1400-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1400 GCA_000222085.2|AFQR01000022.1 Genbank gene 102740 103120 . - . ID=gene-GGE_1401;Name=GGE_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1401 GCA_000222085.2|AFQR01000022.1 Genbank CDS 102740 103120 . - 0 ID=cds-EGT81215.1;Parent=gene-GGE_1401;Dbxref=GeneID:6176572,InterPro:IPR003808,PFAM:PF02657,NCBI_GP:EGT81215.1;Name=EGT81215.1;Note=HI_1293;gbkey=CDS;locus_tag=GGE_1401;product=putative fe-S metabolism associated SufE;protein_id=EGT81215.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 102740 103118 . - . ID=id-GGE_1401;Dbxref=InterPro:IPR003808,PFAM:PF02657;Note=superfamily~sufe~fe-s metabolism associated sufe%3B label: SufE superfamily;gbkey=misc_feature;locus_tag=GGE_1401 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 102740 103115 . - . ID=id-GGE_1401-2;Note=superfamily:SSF82649~sufe/nifu;gbkey=misc_feature;locus_tag=GGE_1401 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 102740 103112 . - . ID=id-GGE_1401-3;Note=Gene3D:3.90.1010.10;gbkey=misc_feature;locus_tag=GGE_1401 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 102947 102956 . + . ID=id-AFQR01000022.1:102947..102956;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 103117 104316 . - . ID=gene-GGE_1402;Name=csd;gbkey=Gene;gene=csd;gene_biotype=protein_coding;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank CDS 103117 104316 . - 0 ID=cds-EGT81216.1;Parent=gene-GGE_1402;Dbxref=GeneID:13431395,InterPro:IPR000192,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00266,NCBI_GP:EGT81216.1;Name=EGT81216.1;Ontology_term=GO:0008152,GO:0003824,GO:0030170;gbkey=CDS;gene=csd;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=metabolic process|0008152||;locus_tag=GGE_1402;product=Putative cysteine desulfurase;protein_id=EGT81216.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103117 104308 . - . ID=id-GGE_1402;Note=multi-dom%3B label: csdA;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103117 104302 . - . ID=id-GGE_1402-2;Note=HMMPanther:PTHR11601~family not named;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103126 104308 . - . ID=id-GGE_1402-3;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103183 104227 . - . ID=id-GGE_1402-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103183 104215 . - . ID=id-GGE_1402-5;Dbxref=InterPro:IPR000192,PFAM:PF00266;Note=aminotran_5~aminotransferase%2C class v/cysteine desulfurase;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103258 103828 . - . ID=id-GGE_1402-6;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103388 103397 . - . ID=id-GGE_1402-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103923 103932 . - . ID=id-GGE_1402-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=csd;locus_tag=GGE_1402 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103153 103795 . + . ID=id-AFQR01000022.1:103153..103795;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 103429 103969 . + . ID=id-AFQR01000022.1:103429..103969;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 104306 104650 . - . ID=gene-GGE_1403;Name=GGE_1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank CDS 104306 104650 . - 0 ID=cds-EGT81217.1;Parent=gene-GGE_1403;Dbxref=InterPro:IPR002071,InterPro:IPR006021,InterPro:IPR016071,PFAM:PF00565,NCBI_GP:EGT81217.1;Name=EGT81217.1;Note=Hypothetical nuclease (SNase-like)%2C OB-fold;Ontology_term=GO:0016788,GO:0004518,GO:0003676;gbkey=CDS;go_function=hydrolase activity acting on ester bonds|0016788||,nuclease activity|0004518||,nucleic acid binding|0003676||;locus_tag=GGE_1403;product=putative nuclease SNase-like%2C OB-fold-containing protein;protein_id=EGT81217.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104306 104612 . - . ID=id-GGE_1403;Dbxref=InterPro:IPR016071;Note=superfamily:SSF50199~staphylococcal nuclease~staphylococcal nuclease (snase-like)%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104306 104606 . - . ID=id-GGE_1403-2;Dbxref=InterPro:IPR006021;Note=Gene3D:2.40.50.90~staphylococcal nuclease (snase-like);gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104306 104591 . - . ID=id-GGE_1403-3;Dbxref=InterPro:IPR006021,PFAM:PF00565;Note=specific~superfamily~snase~staphylococcal nuclease (snase-like)~ProfileScan:PS50830~tnase_3~staphylococcal nuclease (snase-like)%3B label: SNc;gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104306 104369 . - . ID=id-GGE_1403-4;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104324 104345 . - . ID=id-GGE_1403-5;Note=seg;gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104405 104645 . - . ID=id-GGE_1403-6;Note=specific~superfamily%3B label: SNc;gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104456 104594 . - . ID=id-GGE_1403-7;Dbxref=InterPro:IPR006021,PFAM:PF00565;Note=snase~staphylococcal nuclease (snase-like);gbkey=misc_feature;locus_tag=GGE_1403 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104339 104576 . + . ID=id-AFQR01000022.1:104339..104576;Dbxref=InterPro:IPR002071;Note=PatternScan:PS01284~tnase_2~thermonuclease active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104339 104426 . + . ID=id-AFQR01000022.1:104339..104426;Dbxref=InterPro:IPR002071;Note=PatternScan:PS01284~tnase_2~thermonuclease active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104357 104714 . - . ID=id-AFQR01000022.1:104357..104714;Dbxref=InterPro:IPR016071;Note=superfamily:SSF50199~staphylococcal nuclease~staphylococcal nuclease (snase-like)%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104378 104687 . - . ID=id-AFQR01000022.1:104378..104687;Dbxref=InterPro:IPR006021;Note=Gene3D:2.40.50.90~staphylococcal nuclease (snase-like);gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104378 104672 . - . ID=id-AFQR01000022.1:104378..104672;Dbxref=InterPro:IPR006021;Note=multi-dom~ProfileScan:PS50830~tnase_3~staphylococcal nuclease (snase-like)%3B label: SNc;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104384 104411 . + . ID=id-AFQR01000022.1:104384..104411;Dbxref=InterPro:IPR002071;Note=PatternScan:PS01123~tnase_1~thermonuclease active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104745 104754 . + . ID=id-AFQR01000022.1:104745..104754;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 104918 105349 . + . ID=gene-GGE_1404;Name=GGE_1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1404 GCA_000222085.2|AFQR01000022.1 Genbank CDS 104918 105349 . + 0 ID=cds-EGT81218.1;Parent=gene-GGE_1404;Dbxref=InterPro:IPR005538,InterPro:IPR022957,PFAM:PF03788,NCBI_GP:EGT81218.1;Name=EGT81218.1;Note=NTHI1827;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_1404;product=UPF0299 membrane protein;protein_id=EGT81218.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104918 105329 . + . ID=id-GGE_1404;Note=superfamily%3B label: LrgA superfamily;gbkey=misc_feature;locus_tag=GGE_1404 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104918 105278 . + . ID=id-GGE_1404-2;Dbxref=InterPro:IPR022957;Note=HAMAP:MF_01144~upf0299~uncharacterised protein family yohj;gbkey=misc_feature;locus_tag=GGE_1404 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104939 104987 . + . ID=id-GGE_1404-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1404 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104975 105197 . + . ID=id-GGE_1404-4;Dbxref=InterPro:IPR005538,PFAM:PF03788;Note=lrga~uncharacterised protein family lrga/yohj;gbkey=misc_feature;locus_tag=GGE_1404 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104963 105038 . - . ID=id-AFQR01000022.1:104963..105038;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104978 105017 . - . ID=id-AFQR01000022.1:104978..105017;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104987 105200 . - . ID=id-AFQR01000022.1:104987..105200;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 104987 105089 . - . ID=id-AFQR01000022.1:104987..105089;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 105370 106065 . + . ID=gene-GGE_1405;Name=GGE_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1405 GCA_000222085.2|AFQR01000022.1 Genbank CDS 105370 106065 . + 0 ID=cds-EGT81219.1;Parent=gene-GGE_1405;Dbxref=GeneID:1176629,InterPro:IPR005261,InterPro:IPR007300,PFAM:PF04172,TIGRFAM:TIGR00659,NCBI_GP:EGT81219.1;Name=EGT81219.1;Note=HI_1298;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1405;product=putative lrgB-like protein;protein_id=EGT81219.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105379 106048 . + . ID=id-GGE_1405;Dbxref=InterPro:IPR005261,TIGRFAM:TIGR00659;Note=superfamily~tigr00659: conserved hypothetical protein t~conserved hypothetical protein chp00659%3B label: LrgB superfamily;gbkey=misc_feature;locus_tag=GGE_1405 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105385 105430 . + . ID=id-GGE_1405-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1405 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105409 106015 . + . ID=id-GGE_1405-3;Dbxref=InterPro:IPR007300,PFAM:PF04172;Note=lrgb~lrgb-like protein;gbkey=misc_feature;locus_tag=GGE_1405 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105409 105478 . - . ID=id-AFQR01000022.1:105409..105478;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105430 105796 . - . ID=id-AFQR01000022.1:105430..105796;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105439 105991 . - . ID=id-AFQR01000022.1:105439..105991;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105439 105802 . - . ID=id-AFQR01000022.1:105439..105802;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105439 105646 . - . ID=id-AFQR01000022.1:105439..105646;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105439 105541 . - . ID=id-AFQR01000022.1:105439..105541;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 105439 105463 . - . ID=id-AFQR01000022.1:105439..105463;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106105 106114 . + . ID=id-AFQR01000022.1:106105..106114;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 106141 107526 . + . ID=gene-GGE_1406;Name=GGE_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank CDS 106141 107526 . + 0 ID=cds-EGT81220.1;Parent=gene-GGE_1406;Dbxref=GeneID:81335433,InterPro:IPR006261,InterPro:IPR006674,InterPro:IPR023023,InterPro:IPR023279,InterPro:IPR023293,PFAM:PF01966,TIGRFAM:TIGR01353,NCBI_GP:EGT81220.1;Name=EGT81220.1;Note=NTHI1825;Ontology_term=GO:0046039,GO:0008832,GO:0000287;gbkey=CDS;go_function=dGTPase activity|0008832||,magnesium ion binding|0000287||;go_process=GTP metabolic process|0046039||;locus_tag=GGE_1406;product=Deoxyguanosinetriphosphate triphosphohydrolase-like protein;protein_id=EGT81220.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106153 106705 . + . ID=id-GGE_1406;Note=HMMPanther:PTHR11373:SF17~subfamily not named~HMMPanther:PTHR11373~family not named;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106171 107497 . + . ID=id-GGE_1406-2;Dbxref=InterPro:IPR023023;Note=HAMAP:MF_01212~dgtpase_type2~deoxyguanosinetriphosphate triphosphohydrolase%2C type 2;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106183 106942 . + . ID=id-GGE_1406-3;Dbxref=InterPro:IPR023279;Note=Gene3D:1.10.3210.10~hd domain;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106186 107482 . + . ID=id-GGE_1406-4;Note=superfamily%3B label: HDc superfamily;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106204 107464 . + . ID=id-GGE_1406-5;Note=multi-dom%3B label: PRK01096;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106204 107461 . + . ID=id-GGE_1406-6;Note=superfamily:SSF109604~hd-domain/pdease-like;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106243 107425 . + . ID=id-GGE_1406-7;Dbxref=InterPro:IPR006261,TIGRFAM:TIGR01353;Note=dgtp_tripase: putative dgtpase~deoxyguanosinetriphosphate triphosphohydrolase;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106357 106444 . + . ID=id-GGE_1406-8;Dbxref=InterPro:IPR006674,PFAM:PF01966;Note=hd~metal-dependent phosphohydrolase%2C hd subdomain;gbkey=misc_feature;locus_tag=GGE_1406 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106168 106471 . - . ID=id-AFQR01000022.1:106168..106471;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106207 106420 . - . ID=id-AFQR01000022.1:106207..106420;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106471 106984 . - . ID=id-AFQR01000022.1:106471..106984;Dbxref=InterPro:IPR023293;Note=Gene3D:1.10.3410.10~deoxyguanosinetriphosphate triphosphohydrolase%2C central domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 106876 106885 . - . ID=id-AFQR01000022.1:106876..106885;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 107620 109563 . + . ID=gene-GGE_1407;Name=GGE_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank CDS 107620 109563 . + 0 ID=cds-EGT81221.1;Parent=gene-GGE_1407;Dbxref=GeneID:2833489,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT81221.1;Name=EGT81221.1;Note=uup-A;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_1407;product=ABC transporter ATP-binding protein uup-1;protein_id=EGT81221.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107626 109540 . + . ID=id-GGE_1407;Note=multi-dom%3B label: PRK11147;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107629 109294 . + . ID=id-GGE_1407-2;Note=HMMPanther:PTHR19211:SF7~abc transporter abcf3%2C uup~HMMPanther:PTHR19211~family not named;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107632 108370 . + . ID=id-GGE_1407-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107632 108328 . + . ID=id-GGE_1407-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107632 107830 . + . ID=id-GGE_1407-5;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107749 108049 . + . ID=id-GGE_1407-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=superfamily~abc_tran~abc transporter-like%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107992 108067 . + . ID=id-GGE_1407-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1407 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107647 108496 . - . ID=id-AFQR01000022.1:107647..108496;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107665 108943 . - . ID=id-AFQR01000022.1:107665..108943;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107665 108091 . - . ID=id-AFQR01000022.1:107665..108091;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107668 109342 . - . ID=id-AFQR01000022.1:107668..109342;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107668 108967 . - . ID=id-AFQR01000022.1:107668..108967;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107671 109459 . - . ID=id-AFQR01000022.1:107671..109459;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107674 109024 . - . ID=id-AFQR01000022.1:107674..109024;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107686 109477 . - . ID=id-AFQR01000022.1:107686..109477;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107686 109354 . - . ID=id-AFQR01000022.1:107686..109354;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107686 109225 . - . ID=id-AFQR01000022.1:107686..109225;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107851 108082 . - . ID=id-AFQR01000022.1:107851..108082;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 107953 108697 . - . ID=id-AFQR01000022.1:107953..108697;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 108202 108586 . - . ID=id-AFQR01000022.1:108202..108586;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 108202 108583 . - . ID=id-AFQR01000022.1:108202..108583;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 108277 108580 . - . ID=id-AFQR01000022.1:108277..108580;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 108310 108577 . - . ID=id-AFQR01000022.1:108310..108577;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 109591 110280 . - . ID=gene-GGE_1408;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=GGE_1408 GCA_000222085.2|AFQR01000022.1 Genbank CDS 109591 110280 . - 0 ID=cds-EGT81222.1;Parent=gene-GGE_1408;Dbxref=GeneID:1175500,InterPro:IPR001765,InterPro:IPR015892,PFAM:PF00484,NCBI_GP:EGT81222.1;Name=EGT81222.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||,zinc ion binding|0008270||;go_process=carbon utilization|0015976||;locus_tag=GGE_1408;product=Carbonic anhydrase 2;protein_id=EGT81222.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109591 110254 . - . ID=id-GGE_1408;Dbxref=InterPro:IPR001765;Note=HMMPanther:PTHR11002:SF1~carbonic anhydrase~HMMPanther:PTHR11002~family not named~carbonic anhydrase;gbkey=misc_feature;gene=can;locus_tag=GGE_1408 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109591 110197 . - . ID=id-GGE_1408-2;Dbxref=InterPro:IPR001765;Note=Gene3D:3.40.1050.10~carbonic anhydrase~superfamily:SSF53056~beta-carbonic anhydrase%2C cab~carbonic anhydrase;gbkey=misc_feature;gene=can;locus_tag=GGE_1408 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109624 110131 . - . ID=id-GGE_1408-3;Note=specific~superfamily%3B label: beta_CA superfamily;gbkey=misc_feature;gene=can;locus_tag=GGE_1408 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109702 110041 . - . ID=id-GGE_1408-4;Dbxref=InterPro:IPR001765,PFAM:PF00484;Note=pro_ca~carbonic anhydrase;gbkey=misc_feature;gene=can;locus_tag=GGE_1408 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109615 109717 . + . ID=id-AFQR01000022.1:109615..109717;Dbxref=InterPro:IPR015892;Note=PatternScan:PS00704~prok_co2_anhydrase_1~carbonic anhydrase%2C prokaryotic-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 109654 109837 . + . ID=id-AFQR01000022.1:109654..109837;Dbxref=InterPro:IPR015892;Note=PatternScan:PS00705~prok_co2_anhydrase_2~carbonic anhydrase%2C prokaryotic-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110310 110319 . - . ID=id-AFQR01000022.1:110310..110319;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 110356 111759 . - . ID=gene-GGE_1409;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank CDS 110356 111759 . - 0 ID=cds-EGT81223.1;Parent=gene-GGE_1409;Dbxref=GeneID:166231667,InterPro:IPR002312,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004522,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018150,PFAM:PF00152,PFAM:PF01336,TIGRFAM:TIGR00457,NCBI_GP:EGT81223.1;Name=EGT81223.1;Ontology_term=GO:0006421,GO:0006422,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004816,GO:0004815,GO:0003676,GO:0000166;gbkey=CDS;gene=asnS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,asparagine-tRNA ligase activity|0004816||,aspartate-tRNA ligase activity|0004815||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=asparaginyl-tRNA aminoacylation|0006421||,aspartyl-tRNA aminoacylation|0006422||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1409;product=Asparaginyl-tRNA synthetase;protein_id=EGT81223.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110356 111745 . - . ID=id-GGE_1409;Dbxref=InterPro:IPR018150;Note=HMMPanther:PTHR22594:SF6~aspartyl-trna synthetase~HMMPanther:PTHR22594~family not named~aminoacyl-trna synthetase%2C class ii (d/k/n)-like;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110356 110671 . - . ID=id-GGE_1409-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110365 111751 . - . ID=id-GGE_1409-3;Note=multi-dom%3B label: asnC;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110368 111748 . - . ID=id-GGE_1409-4;Dbxref=InterPro:IPR004522,TIGRFAM:TIGR00457;Note=asns: asparaginyl-trna synthetase~asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110377 111739 . - . ID=id-GGE_1409-5;Dbxref=InterPro:IPR004522;Note=HAMAP:MF_00534~asn_trna_synth~asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110407 110620 . - . ID=id-GGE_1409-6;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110419 110596 . - . ID=id-GGE_1409-7;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110452 110569 . - . ID=id-GGE_1409-8;Note=specific~superfamily%3B label: EcAsnRS_like_N;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110641 111475 . - . ID=id-GGE_1409-9;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110683 111424 . - . ID=id-GGE_1409-10;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110704 111400 . - . ID=id-GGE_1409-11;Note=specific~superfamily%3B label: AsxRS_core;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110719 111379 . - . ID=id-GGE_1409-12;Dbxref=InterPro:IPR004364,PFAM:PF00152;Note=trna-synt_2~aminoacyl-trna synthetase%2C class ii (d/k/n);gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110791 111295 . - . ID=id-GGE_1409-13;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=asnS;locus_tag=GGE_1409 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110392 110416 . + . ID=id-AFQR01000022.1:110392..110416;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110395 110983 . + . ID=id-AFQR01000022.1:110395..110983;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110398 111031 . + . ID=id-AFQR01000022.1:110398..111031;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110401 111622 . + . ID=id-AFQR01000022.1:110401..111622;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 110407 111502 . + . ID=id-AFQR01000022.1:110407..111502;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 111986 112459 . + . ID=gene-GGE_1410;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank CDS 111986 112459 . + 0 ID=cds-EGT81224.1;Parent=gene-GGE_1410;Dbxref=GeneID:166227337,InterPro:IPR002180,PFAM:PF00885,TIGRFAM:TIGR00114,NCBI_GP:EGT81224.1;Name=EGT81224.1;Ontology_term=GO:0009231,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||;go_process=riboflavin biosynthetic process|0009231||;locus_tag=GGE_1410;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=EGT81224.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 111986 112454 . + . ID=id-GGE_1410;Dbxref=InterPro:IPR002180;Note=superfamily:SSF52121~lumazine synthase~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 111986 112451 . + . ID=id-GGE_1410-2;Dbxref=InterPro:IPR002180;Note=Gene3D:3.40.50.960~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 111986 112448 . + . ID=id-GGE_1410-3;Dbxref=InterPro:IPR002180;Note=HMMPanther:PTHR21058~family not named~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112010 112427 . + . ID=id-GGE_1410-4;Dbxref=InterPro:IPR002180;Note=HAMAP:MF_00178~lumazine_synth~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112010 112025 . + . ID=id-GGE_1410-5;Note=seg;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112019 112415 . + . ID=id-GGE_1410-6;Dbxref=InterPro:IPR002180,PFAM:PF00885;Note=dmrl_synthase~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112025 112403 . + . ID=id-GGE_1410-7;Dbxref=InterPro:IPR002180,TIGRFAM:TIGR00114;Note=lumazine-synth: 6%2C7-dimethyl-8-ribityl~6%2C7-dimethyl-8-ribityllumazine synthase;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112049 112370 . + . ID=id-GGE_1410-8;Note=specific~superfamily%3B label: Lumazine_synthase-I;gbkey=misc_feature;gene=ribH;locus_tag=GGE_1410 GCA_000222085.2|AFQR01000022.1 Genbank gene 112463 112897 . + . ID=gene-GGE_1411;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank CDS 112463 112897 . + 0 ID=cds-EGT81225.1;Parent=gene-GGE_1411;Dbxref=GeneID:1171874,InterPro:IPR006027,InterPro:IPR011605,PFAM:PF01029,TIGRFAM:TIGR01951,NCBI_GP:EGT81225.1;Name=EGT81225.1;Ontology_term=GO:0006355,GO:0006353,GO:0003723,GO:0003715;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||,transcription termination factor activity|0003715||;go_process=regulation of transcription DNA-dependent|0006355||,transcription termination DNA-dependent|0006353||;locus_tag=GGE_1411;product=N utilization substance protein B;protein_id=EGT81225.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112478 112874 . + . ID=id-GGE_1411;Note=HMMPanther:PTHR11078~family not named;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112481 112862 . + . ID=id-GGE_1411-2;Dbxref=InterPro:IPR006027;Note=Gene3D:1.10.940.10~nusb/rsmb/tim44;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112496 112859 . + . ID=id-GGE_1411-3;Dbxref=InterPro:IPR011605;Note=HAMAP:MF_00073~nusb~nusb antitermination factor;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112499 112853 . + . ID=id-GGE_1411-4;Dbxref=InterPro:IPR011605,TIGRFAM:TIGR01951;Note=nusb: transcription antitermination factor n~nusb antitermination factor;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112499 112841 . + . ID=id-GGE_1411-5;Dbxref=InterPro:IPR006027;Note=superfamily:SSF48013~nusb-like~nusb/rsmb/tim44;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112502 112850 . + . ID=id-GGE_1411-6;Note=specific~superfamily%3B label: NusB_Sun superfamily;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 112505 112838 . + . ID=id-GGE_1411-7;Dbxref=InterPro:IPR006027,PFAM:PF01029;Note=nusb~nusb/rsmb/tim44;gbkey=misc_feature;gene=nusB;locus_tag=GGE_1411 GCA_000222085.2|AFQR01000022.1 Genbank gene 113085 113549 . + . ID=gene-GGE_1412;Name=GGE_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1412 GCA_000222085.2|AFQR01000022.1 Genbank CDS 113085 113549 . + 0 ID=cds-EGT81226.1;Parent=gene-GGE_1412;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT81226.1;Name=EGT81226.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1412;product=transposase like protein;protein_id=EGT81226.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113100 113478 . + . ID=id-GGE_1412;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1412 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113103 113478 . + . ID=id-GGE_1412-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1412 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113130 113442 . + . ID=id-GGE_1412-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1412 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113133 113439 . + . ID=id-GGE_1412-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1412 GCA_000222085.2|AFQR01000022.1 Genbank gene 113661 115604 . - . ID=gene-GGE_1413;Name=GGE_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank CDS 113661 115604 . - 0 ID=cds-EGT81227.1;Parent=gene-GGE_1413;Dbxref=GeneID:1175586,InterPro:IPR000917,InterPro:IPR012160,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884,PIR:PIRSF005091,NCBI_GP:EGT81227.1;Name=EGT81227.1;Note=HI_1246;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_1413;product=putative sulfatase;protein_id=EGT81227.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113661 115602 . - . ID=id-GGE_1413;Dbxref=InterPro:IPR012160,PIR:PIRSF005091;Note=multi-dom~predicted membrane sulfatase%2C hi1246 type~membrane sulfatase%2C hi1246-related%3B label: MdoB;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113700 113730 . - . ID=id-GGE_1413-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 114132 114975 . - . ID=id-GGE_1413-3;Note=HMMPanther:PTHR10342:SF36~sulfatase family protein~HMMPanther:PTHR10342~arylsulfatase;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 114507 114609 . - . ID=id-GGE_1413-4;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 114513 114558 . - . ID=id-GGE_1413-5;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 114513 114543 . - . ID=id-GGE_1413-6;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature;locus_tag=GGE_1413 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113703 113727 . + . ID=id-AFQR01000022.1:113703..113727;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113715 114195 . + . ID=id-AFQR01000022.1:113715..114195;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113730 114090 . + . ID=id-AFQR01000022.1:113730..114090;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113730 113925 . + . ID=id-AFQR01000022.1:113730..113925;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 113730 113838 . + . ID=id-AFQR01000022.1:113730..113838;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 114510 114513 . + . ID=id-AFQR01000022.1:114510..114513;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115686 115695 . + . ID=id-AFQR01000022.1:115686..115695;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115842 115851 . - . ID=id-AFQR01000022.1:115842..115851;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 115858 118128 . - . ID=gene-GGE_1414;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank CDS 115858 118128 . - 0 ID=cds-EGT81228.1;Parent=gene-GGE_1414;Dbxref=GeneID:1170873,InterPro:IPR002505,InterPro:IPR012188,InterPro:IPR012301,InterPro:IPR012302,InterPro:IPR015884,InterPro:IPR016040,PFAM:PF00390,PFAM:PF01515,PFAM:PF03949,PIR:PIRSF036684,NCBI_GP:EGT81228.1;Name=EGT81228.1;Ontology_term=GO:0008152,GO:0055114,GO:0051287,GO:0008415,GO:0005488,GO:0003824,GO:0046872,GO:0016616,GO:0016491;gbkey=CDS;gene=maeB;go_function=NAD or NADH binding|0051287||,acyltransferase activity|0008415||,binding|0005488||,catalytic activity|0003824||,metal ion binding|0046872||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1414;product=NADP-dependent malic enzyme;protein_id=EGT81228.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115858 118126 . - . ID=id-GGE_1414;Dbxref=InterPro:IPR012188,PIR:PIRSF036684;Note=malic enzyme with phosphate acetyl/butaryl transferase domain~malic enzyme%2C phosphate acetyl/butaryl transferase;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115858 117193 . - . ID=id-GGE_1414-2;Note=HMMPanther:PTHR23406:SF8~subfamily not named~HMMPanther:PTHR23406~family not named;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115867 118117 . - . ID=id-GGE_1414-3;Note=multi-dom%3B label: PRK07232;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115882 116320 . - . ID=id-GGE_1414-4;Note=superfamily:SSF53223~aminoacid dehydrogenase-like domain;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115897 116302 . - . ID=id-GGE_1414-5;Dbxref=InterPro:IPR012301;Note=Gene3D:3.40.50.10380~malic enzyme;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115912 116260 . - . ID=id-GGE_1414-6;Note=superfamily%3B label: malic superfamily;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115915 116257 . - . ID=id-GGE_1414-7;Dbxref=InterPro:IPR012301,PFAM:PF00390;Note=malic~malic enzyme;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116341 116725 . - . ID=id-GGE_1414-8;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116347 116734 . - . ID=id-GGE_1414-9;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116347 116575 . - . ID=id-GGE_1414-10;Dbxref=InterPro:IPR012302,PFAM:PF03949;Note=malic_m~malic enzyme%2C nad-binding;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116347 116572 . - . ID=id-GGE_1414-11;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=maeB;locus_tag=GGE_1414 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115885 116359 . + . ID=id-AFQR01000022.1:115885..116359;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 115909 116335 . + . ID=id-AFQR01000022.1:115909..116335;Dbxref=InterPro:IPR015884;Note=PatternScan:PS00331~malic_enzymes~malic enzyme%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116821 117148 . + . ID=id-AFQR01000022.1:116821..117148;Dbxref=InterPro:IPR002505,PFAM:PF01515;Note=pta_ptb~phosphate acetyl/butaryl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116824 117145 . + . ID=id-AFQR01000022.1:116824..117145;Note=superfamily%3B label: PTA_PTB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 116833 117145 . + . ID=id-AFQR01000022.1:116833..117145;Note=superfamily:SSF53659~isocitrate/isopropylmalate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 118325 118945 . + . ID=gene-GGE_1415;Name=GGE_1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1415 GCA_000222085.2|AFQR01000022.1 Genbank CDS 118325 118945 . + 0 ID=cds-EGT81229.1;Parent=gene-GGE_1415;Dbxref=GeneID:1175585,InterPro:IPR015037,PFAM:PF08942,NCBI_GP:EGT81229.1;Name=EGT81229.1;Note=HI_1244;gbkey=CDS;locus_tag=GGE_1415;product=Hypothetical protein;protein_id=EGT81229.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 118325 118940 . + . ID=id-GGE_1415;Note=superfamily:SSF142795~cac2185-like;gbkey=misc_feature;locus_tag=GGE_1415 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 118346 118919 . + . ID=id-GGE_1415-2;Note=superfamily%3B label: DUF1919 superfamily;gbkey=misc_feature;locus_tag=GGE_1415 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 118349 118916 . + . ID=id-GGE_1415-3;Dbxref=InterPro:IPR015037,PFAM:PF08942;Note=duf1919~protein of unknown function duf1919;gbkey=misc_feature;locus_tag=GGE_1415 GCA_000222085.2|AFQR01000022.1 Genbank gene 119036 119734 . + . ID=gene-GGE_1416;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank CDS 119036 119734 . + 0 ID=cds-EGT81230.1;Parent=gene-GGE_1416;Dbxref=GeneID:1175857,InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,PFAM:PF00849,PFAM:PF01479,TIGRFAM:TIGR00093,NCBI_GP:EGT81230.1;Name=EGT81230.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0016866,GO:0009982;gbkey=CDS;gene=rsuA;go_function=RNA binding|0003723||,intramolecular transferase activity|0016866||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_1416;product=Ribosomal small subunit pseudouridine synthase A;protein_id=EGT81230.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119726 . + . ID=id-GGE_1416;Note=multi-dom~HMMPanther:PTHR21600:SF6~subfamily not named~HMMPanther:PTHR21600~family not named%3B label: PRK10839;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119240 . + . ID=id-GGE_1416-2;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119234 . + . ID=id-GGE_1416-3;Note=specific~superfamily%3B label: S4;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119213 . + . ID=id-GGE_1416-4;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119186 . + . ID=id-GGE_1416-5;Note=Gene3D:3.10.290.10;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119036 119177 . + . ID=id-GGE_1416-6;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119105 119114 . + . ID=id-GGE_1416-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119210 119558 . + . ID=id-GGE_1416-8;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119219 119537 . + . ID=id-GGE_1416-9;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119222 119429 . + . ID=id-GGE_1416-10;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119234 119513 . + . ID=id-GGE_1416-11;Dbxref=InterPro:IPR000748,TIGRFAM:TIGR00093;Note=tigr00093: pseudouridine synthase~pseudouridine synthase%2C rsua/rlub/e/f;gbkey=misc_feature;gene=rsuA;locus_tag=GGE_1416 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119081 119339 . - . ID=id-AFQR01000022.1:119081..119339;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119081 119333 . - . ID=id-AFQR01000022.1:119081..119333;Dbxref=InterPro:IPR018496;Note=PatternScan:PS01149~psi_rsu~pseudouridine synthase%2C rsua and rlub/e/f%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 119736 120938 . + . ID=gene-GGE_1417;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank CDS 119736 120938 . + 0 ID=cds-EGT81231.1;Parent=gene-GGE_1417;Dbxref=GeneID:1168624,InterPro:IPR004812,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00710,NCBI_GP:EGT81231.1;Name=EGT81231.1;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005215;gbkey=CDS;gene=bcr;go_component=integral to membrane|0016021||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1417;product=Bicyclomycin resistance protein;protein_id=EGT81231.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119736 120936 . + . ID=id-GGE_1417;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119736 120915 . + . ID=id-GGE_1417-2;Note=HMMPanther:PTHR24003:SF28~subfamily not named~HMMPanther:PTHR24003~family not named;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119751 120894 . + . ID=id-GGE_1417-3;Dbxref=InterPro:IPR004812,TIGRFAM:TIGR00710;Note=efflux_bcr_cfla: drug resistance tran~drug resistance transporter bcr/cfla subfamily;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119757 119805 . + . ID=id-GGE_1417-4;Note=transmembrane_regions;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119766 120891 . + . ID=id-GGE_1417-5;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119769 120873 . + . ID=id-GGE_1417-6;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119784 120756 . + . ID=id-GGE_1417-7;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119793 120867 . + . ID=id-GGE_1417-8;Note=multi-dom%3B label: PRK11102;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119820 120240 . + . ID=id-GGE_1417-9;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=bcr;locus_tag=GGE_1417 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119754 120258 . - . ID=id-AFQR01000022.1:119754..120258;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119775 120393 . - . ID=id-AFQR01000022.1:119775..120393;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119796 119961 . - . ID=id-AFQR01000022.1:119796..119961;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119796 119883 . - . ID=id-AFQR01000022.1:119796..119883;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120837 . - . ID=id-AFQR01000022.1:119805..120837;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120615 . - . ID=id-AFQR01000022.1:119805..120615;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120486 . - . ID=id-AFQR01000022.1:119805..120486;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120390 . - . ID=id-AFQR01000022.1:119805..120390;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120222 . - . ID=id-AFQR01000022.1:119805..120222;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120141 . - . ID=id-AFQR01000022.1:119805..120141;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 119805 120036 . - . ID=id-AFQR01000022.1:119805..120036;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 120626 120635 . - . ID=id-AFQR01000022.1:120626..120635;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 120989 121873 . - . ID=gene-GGE_1418;Name=GGE_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank CDS 120989 121873 . - 0 ID=cds-EGT81232.1;Parent=gene-GGE_1418;Dbxref=GeneID:301156528,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT81232.1;Name=EGT81232.1;Note=CBW15999;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1418;product=Hypothetical protein;protein_id=EGT81232.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 120989 121055 . - . ID=id-GGE_1418;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121025 121826 . - . ID=id-GGE_1418-2;Note=HMMPanther:PTHR22911~family not named;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121028 121049 . - . ID=id-GGE_1418-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121355 . - . ID=id-GGE_1418-4;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121079 121331 . - . ID=id-GGE_1418-5;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121106 121736 . - . ID=id-GGE_1418-6;Note=multi-dom%3B label: 2A78;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121124 121307 . - . ID=id-GGE_1418-7;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_1418 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121043 121370 . + . ID=id-AFQR01000022.1:121043..121370;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121043 121202 . + . ID=id-AFQR01000022.1:121043..121202;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121049 121808 . + . ID=id-AFQR01000022.1:121049..121808;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121049 121721 . + . ID=id-AFQR01000022.1:121049..121721;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121049 121451 . + . ID=id-AFQR01000022.1:121049..121451;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121730 . + . ID=id-AFQR01000022.1:121058..121730;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121649 . + . ID=id-AFQR01000022.1:121058..121649;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121544 . + . ID=id-AFQR01000022.1:121058..121544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121283 . + . ID=id-AFQR01000022.1:121058..121283;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121058 121097 . + . ID=id-AFQR01000022.1:121058..121097;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121301 121562 . + . ID=id-AFQR01000022.1:121301..121562;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121358 121493 . + . ID=id-AFQR01000022.1:121358..121493;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 121855 122685 . - . ID=gene-GGE_1419;Name=GGE_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1419 GCA_000222085.2|AFQR01000022.1 Genbank CDS 121855 122685 . - 0 ID=cds-EGT81233.1;Parent=gene-GGE_1419;Dbxref=GeneID:1175584,NCBI_GP:EGT81233.1;Name=EGT81233.1;Note=HI_1241;gbkey=CDS;locus_tag=GGE_1419;product=hypothetical protein;protein_id=EGT81233.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121918 121924 . - . ID=id-GGE_1419;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1419 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122020 122029 . - . ID=id-GGE_1419-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1419 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121909 122167 . + . ID=id-AFQR01000022.1:121909..122167;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121909 122101 . + . ID=id-AFQR01000022.1:121909..122101;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121912 122350 . + . ID=id-AFQR01000022.1:121912..122350;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121915 122623 . + . ID=id-AFQR01000022.1:121915..122623;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121924 122536 . + . ID=id-AFQR01000022.1:121924..122536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121924 122425 . + . ID=id-AFQR01000022.1:121924..122425;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121924 122254 . + . ID=id-AFQR01000022.1:121924..122254;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121924 121996 . + . ID=id-AFQR01000022.1:121924..121996;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 121930 122431 . + . ID=id-AFQR01000022.1:121930..122431;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 122752 123414 . + . ID=gene-GGE_1420;Name=GGE_1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1420 GCA_000222085.2|AFQR01000022.1 Genbank CDS 122752 123414 . + 0 ID=cds-EGT81234.1;Parent=gene-GGE_1420;Dbxref=GeneID:1176308,InterPro:IPR005115,PFAM:PF03458,NCBI_GP:EGT81234.1;Name=EGT81234.1;Note=HI_1240;gbkey=CDS;locus_tag=GGE_1420;product=UPF0126 membrane protein;protein_id=EGT81234.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122752 123379 . + . ID=id-GGE_1420;Note=multi-dom%3B label: COG2860;gbkey=misc_feature;locus_tag=GGE_1420 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122761 122992 . + . ID=id-GGE_1420-2;Note=superfamily%3B label: UPF0126 superfamily;gbkey=misc_feature;locus_tag=GGE_1420 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122764 122986 . + . ID=id-GGE_1420-3;Dbxref=InterPro:IPR005115,PFAM:PF03458;Note=upf0126~uncharacterised protein family upf0126;gbkey=misc_feature;locus_tag=GGE_1420 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122767 122806 . + . ID=id-GGE_1420-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1420 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122806 123109 . - . ID=id-AFQR01000022.1:122806..123109;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122812 122950 . - . ID=id-AFQR01000022.1:122812..122950;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122821 123028 . - . ID=id-AFQR01000022.1:122821..123028;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122821 122839 . - . ID=id-AFQR01000022.1:122821..122839;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 122986 123031 . - . ID=id-AFQR01000022.1:122986..123031;Dbxref=InterPro:IPR005115,PFAM:PF03458;Note=superfamily~upf0126~uncharacterised protein family upf0126%3B label: UPF0126 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 123435 124688 . + . ID=gene-GGE_1421;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank CDS 123435 124688 . + 0 ID=cds-EGT81235.1;Parent=gene-GGE_1421;Dbxref=GeneID:1172626,InterPro:IPR000965,InterPro:IPR012134,InterPro:IPR015590,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR020593,PFAM:PF00171,PIR:PIRSF000151,TIGRFAM:TIGR00407,NCBI_GP:EGT81235.1;Name=EGT81235.1;Ontology_term=GO:0008152,GO:0055114,GO:0006561,GO:0050661,GO:0004350,GO:0016491;gbkey=CDS;gene=proA;go_function=NADP or NADPH binding|0050661||,glutamate-5-semialdehyde dehydrogenase activity|0004350||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,proline biosynthetic process|0006561||;locus_tag=GGE_1421;product=Gamma-glutamyl phosphate reductase;protein_id=EGT81235.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123435 124686 . + . ID=id-GGE_1421;Dbxref=InterPro:IPR012134,PIR:PIRSF000151;Note=HAMAP:MF_00412~proa~glutamate-5-semialdehyde dehydrogenase~gamma-glutamyl phosphate reductase~glutamate-5-semialdehyde dehydrogenase;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123435 124683 . + . ID=id-GGE_1421-2;Dbxref=InterPro:IPR012134;Note=HMMPanther:PTHR11063:SF1~glutamate semialdehyde dehydrogenase~glutamate-5-semialdehyde dehydrogenase~HMMPanther:PTHR11063~family not named;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123441 124680 . + . ID=id-GGE_1421-3;Dbxref=InterPro:IPR016161;Note=superfamily:SSF53720~aldh-like~aldehyde/histidinol dehydrogenase;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123444 124665 . + . ID=id-GGE_1421-4;Note=specific~superfamily%3B label: ALDH-SF superfamily;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123456 124263 . + . ID=id-GGE_1421-5;Dbxref=InterPro:IPR015590,PFAM:PF00171;Note=aldedh~aldehyde dehydrogenase domain;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123462 124629 . + . ID=id-GGE_1421-6;Dbxref=InterPro:IPR000965,TIGRFAM:TIGR00407;Note=multi-dom~proa: glutamate-5-semialdehyde dehydrogenase~gamma-glutamyl phosphate reductase gpr%3B label: proA;gbkey=misc_feature;gene=proA;locus_tag=GGE_1421 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123501 124404 . - . ID=id-AFQR01000022.1:123501..124404;Dbxref=InterPro:IPR020593;Note=PatternScan:PS01223~proa~gamma-glutamyl phosphate reductase gpr%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123564 124557 . - . ID=id-AFQR01000022.1:123564..124557;Dbxref=InterPro:IPR016162;Note=Gene3D:3.40.605.10~aldehyde dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 123888 124104 . - . ID=id-AFQR01000022.1:123888..124104;Dbxref=InterPro:IPR016163;Note=Gene3D:3.40.309.10~aldehyde dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124693 124702 . + . ID=id-AFQR01000022.1:124693..124702;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 124767 125915 . - . ID=gene-GGE_1422;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank CDS 124767 125915 . - 0 ID=cds-EGT81236.1;Parent=gene-GGE_1422;Dbxref=GeneID:81335349,InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR012724,InterPro:IPR018253,PFAM:PF00226,PFAM:PF00684,PFAM:PF01556,TIGRFAM:TIGR02349,NCBI_GP:EGT81236.1;Name=EGT81236.1;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||,heat shock protein binding|0031072||,unfolded protein binding|0051082||;go_process=protein folding|0006457||,response to heat|0009408||;locus_tag=GGE_1422;product=Chaperone protein dnaJ;protein_id=EGT81236.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124767 125892 . - . ID=id-GGE_1422;Note=multi-dom%3B label: PRK10767;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124767 125799 . - . ID=id-GGE_1422-2;Note=HMMPanther:PTHR24076:SF80~subfamily not named~HMMPanther:PTHR24076~family not named;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124767 125133 . - . ID=id-GGE_1422-3;Dbxref=InterPro:IPR001623;Note=superfamily:SSF46565~chaperone j-domain~heat shock protein dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124767 125043 . - . ID=id-GGE_1422-4;Dbxref=InterPro:IPR001623;Note=Gene3D:1.10.287.110~heat shock protein dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124773 125883 . - . ID=id-GGE_1422-5;Dbxref=InterPro:IPR012724;Note=HAMAP:MF_01152~dnaj~chaperone dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124782 125808 . - . ID=id-GGE_1422-6;Dbxref=InterPro:IPR012724,TIGRFAM:TIGR02349;Note=dnaj_bact: chaperone protein dnaj~chaperone dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124782 124965 . - . ID=id-GGE_1422-7;Dbxref=InterPro:IPR001623;Note=ProfileScan:PS50076~dnaj_2~heat shock protein dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124782 124956 . - . ID=id-GGE_1422-8;Dbxref=InterPro:IPR001623,PFAM:PF00226;Note=dnaj~heat shock protein dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124782 124932 . - . ID=id-GGE_1422-9;Note=specific~superfamily%3B label: DnaJ;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124788 124824 . - . ID=id-GGE_1422-10;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125121 125187 . - . ID=id-GGE_1422-11;Dbxref=InterPro:IPR008971;Note=superfamily:SSF49493~hsp40/dnaj peptide-binding domain~hsp40/dnaj peptide-binding;gbkey=misc_feature;gene=dnaJ;locus_tag=GGE_1422 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124812 125781 . + . ID=id-AFQR01000022.1:124812..125781;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124815 124842 . + . ID=id-AFQR01000022.1:124815..124842;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124827 124953 . + . ID=id-AFQR01000022.1:124827..124953;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124827 124908 . + . ID=id-AFQR01000022.1:124827..124908;Dbxref=InterPro:IPR018253;Note=PatternScan:PS00636~dnaj_1~heat shock protein dnaj%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124830 124893 . + . ID=id-AFQR01000022.1:124830..124893;Dbxref=InterPro:IPR003095;Note=FPrintScan:PR00625~jdomain~heat shock protein dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124833 124887 . + . ID=id-AFQR01000022.1:124833..124887;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124872 124998 . + . ID=id-AFQR01000022.1:124872..124998;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124890 125406 . + . ID=id-AFQR01000022.1:124890..125406;Note=superfamily%3B label: DnaJ_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124902 125397 . + . ID=id-AFQR01000022.1:124902..125397;Note=Gene3D:2.60.260.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124974 125190 . + . ID=id-AFQR01000022.1:124974..125190;Dbxref=InterPro:IPR001305;Note=Gene3D:2.10.230.10~heat shock protein dnaj%2C cysteine-rich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 124989 125169 . + . ID=id-AFQR01000022.1:124989..125169;Dbxref=InterPro:IPR001305,PFAM:PF00684;Note=dnaj_cxxcxgxg~heat shock protein dnaj%2C cysteine-rich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125004 125169 . + . ID=id-AFQR01000022.1:125004..125169;Dbxref=InterPro:IPR001305;Note=superfamily:SSF57938~dnaj/hsp40 cysteine-rich domain~heat shock protein dnaj%2C cysteine-rich domain~ProfileScan:PS51188~zf_cr~heat shock protein dnaj%2C cysteine-rich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125031 125541 . + . ID=id-AFQR01000022.1:125031..125541;Dbxref=InterPro:IPR008971;Note=superfamily:SSF49493~hsp40/dnaj peptide-binding domain~hsp40/dnaj peptide-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125040 125535 . + . ID=id-AFQR01000022.1:125040..125535;Note=Gene3D:2.60.260.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125046 125502 . + . ID=id-AFQR01000022.1:125046..125502;Note=superfamily%3B label: DnaJ_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125064 125502 . + . ID=id-AFQR01000022.1:125064..125502;Dbxref=InterPro:IPR002939,PFAM:PF01556;Note=dnaj_c~chaperone dnaj;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 125978 126382 . - . ID=gene-GGE_1423;Name=GGE_1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1423 GCA_000222085.2|AFQR01000022.1 Genbank CDS 125978 126382 . - 0 ID=cds-EGT81237.1;Parent=gene-GGE_1423;Dbxref=GeneID:260913610,InterPro:IPR010499,PFAM:PF06445,NCBI_GP:EGT81237.1;Name=EGT81237.1;Note=ZP_05920086;gbkey=CDS;locus_tag=GGE_1423;product=putative transcription activator-binding protein;protein_id=EGT81237.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 125999 126350 . - . ID=id-GGE_1423;Dbxref=InterPro:IPR010499,PFAM:PF06445;Note=arac_e_bind~bacterial transcription activator- binding protein;gbkey=misc_feature;locus_tag=GGE_1423 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126008 126350 . - . ID=id-GGE_1423-2;Note=superfamily%3B label: AraC_E_bind superfamily;gbkey=misc_feature;locus_tag=GGE_1423 GCA_000222085.2|AFQR01000022.1 Genbank gene 126525 128438 . - . ID=gene-GGE_1424;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank CDS 126525 128438 . - 0 ID=cds-EGT81238.1;Parent=gene-GGE_1424;Dbxref=GeneID:166918214,InterPro:IPR001023,InterPro:IPR012725,InterPro:IPR013126,InterPro:IPR018181,PFAM:PF00012,TIGRFAM:TIGR02350,NCBI_GP:EGT81238.1;Name=EGT81238.1;Ontology_term=GO:0006457,GO:0005524,GO:0051082;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||,unfolded protein binding|0051082||;go_process=protein folding|0006457||;locus_tag=GGE_1424;product=Chaperone protein dnaK;protein_id=EGT81238.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126525 128430 . - . ID=id-GGE_1424;Note=multi-dom%3B label: dnaK;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126525 128418 . - . ID=id-GGE_1424-2;Dbxref=InterPro:IPR012725;Note=HAMAP:MF_00332~dnak~chaperone dnak;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126525 128415 . - . ID=id-GGE_1424-3;Dbxref=InterPro:IPR001023;Note=HMMPanther:PTHR19375:SF1~heat shock protein 70 (hsp70)~HMMPanther:PTHR19375~family not named~heat shock protein hsp70;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126525 127074 . - . ID=id-GGE_1424-4;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126534 128328 . - . ID=id-GGE_1424-5;Dbxref=InterPro:IPR012725,TIGRFAM:TIGR02350;Note=prok_dnak: chaperone protein dnak~chaperone dnak;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126534 126567 . - . ID=id-GGE_1424-6;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126537 128319 . - . ID=id-GGE_1424-7;Dbxref=InterPro:IPR013126,PFAM:PF00012;Note=hsp70~heat shock protein 70;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126546 126549 . - . ID=id-GGE_1424-8;Dbxref=InterPro:IPR018181;Note=PatternScan:PS00297~hsp70_1~heat shock protein 70%2C conserved site;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 127080 127125 . - . ID=id-GGE_1424-9;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 127134 127143 . - . ID=id-GGE_1424-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dnaK;locus_tag=GGE_1424 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126552 126684 . + . ID=id-AFQR01000022.1:126552..126684;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126558 127116 . + . ID=id-AFQR01000022.1:126558..127116;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126564 126618 . + . ID=id-AFQR01000022.1:126564..126618;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126567 127098 . + . ID=id-AFQR01000022.1:126567..127098;Dbxref=InterPro:IPR018181;Note=PatternScan:PS00329~hsp70_2~heat shock protein 70%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126570 127533 . + . ID=id-AFQR01000022.1:126570..127533;Dbxref=InterPro:IPR018181;Note=PatternScan:PS01036~hsp70_3~heat shock protein 70%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126576 127929 . + . ID=id-AFQR01000022.1:126576..127929;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126576 127524 . + . ID=id-AFQR01000022.1:126576..127524;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126585 128322 . + . ID=id-AFQR01000022.1:126585..128322;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126585 127686 . + . ID=id-AFQR01000022.1:126585..127686;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126588 127617 . + . ID=id-AFQR01000022.1:126588..127617;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126588 126936 . + . ID=id-AFQR01000022.1:126588..126936;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126600 127632 . + . ID=id-AFQR01000022.1:126600..127632;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126621 127269 . + . ID=id-AFQR01000022.1:126621..127269;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126654 127476 . + . ID=id-AFQR01000022.1:126654..127476;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126684 126684 . + . ID=id-AFQR01000022.1:126684..126684;Note=Gene3D:3.30.30.30;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126735 128121 . + . ID=id-AFQR01000022.1:126735..128121;Note=Gene3D:1.20.1270.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126762 128124 . + . ID=id-AFQR01000022.1:126762..128124;Note=superfamily:SSF100934~heat shock protein 70kd (hsp70) subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126762 126876 . + . ID=id-AFQR01000022.1:126762..126876;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126777 127212 . + . ID=id-AFQR01000022.1:126777..127212;Note=Gene3D:3.90.640.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126954 127692 . + . ID=id-AFQR01000022.1:126954..127692;Note=Gene3D:2.60.34.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 126999 127671 . + . ID=id-AFQR01000022.1:126999..127671;Note=superfamily:SSF100920~heat shock protein 70kd (hsp70)%2C peptide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128561 128570 . + . ID=id-AFQR01000022.1:128561..128570;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 128605 128703 . + . ID=gene-GGE_1425;Name=GGE_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1425 GCA_000222085.2|AFQR01000022.1 Genbank CDS 128605 128703 . + 0 ID=cds-EGT81239.1;Parent=gene-GGE_1425;Dbxref=GeneID:229846860,NCBI_GP:EGT81239.1;Name=EGT81239.1;Note=ZP_04466967~CGSHi7P49H1_02528;gbkey=CDS;locus_tag=GGE_1425;product=Hypothetical protein;protein_id=EGT81239.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank gene 128704 130152 . + . ID=gene-GGE_1426;Name=GGE_1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank CDS 128704 130152 . + 0 ID=cds-EGT81240.1;Parent=gene-GGE_1426;Dbxref=GeneID:148825830,InterPro:IPR010352,PFAM:PF06097,NCBI_GP:EGT81240.1;Name=EGT81240.1;Note=YP_001290583~CGSHiEE_03915;gbkey=CDS;locus_tag=GGE_1426;product=Hypothetical protein;protein_id=EGT81240.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128704 130108 . + . ID=id-GGE_1426;Dbxref=InterPro:IPR010352,PFAM:PF06097;Note=duf945~protein of unknown function duf945;gbkey=misc_feature;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128725 128764 . + . ID=id-GGE_1426-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128725 128755 . + . ID=id-GGE_1426-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128776 130066 . + . ID=id-GGE_1426-4;Note=multi-dom%3B label: COG5339;gbkey=misc_feature;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 128776 130045 . + . ID=id-GGE_1426-5;Note=superfamily%3B label: PRK11367 superfamily;gbkey=misc_feature;locus_tag=GGE_1426 GCA_000222085.2|AFQR01000022.1 Genbank gene 130218 130676 . - . ID=gene-GGE_1427;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank CDS 130218 130676 . - 0 ID=cds-EGT81241.1;Parent=gene-GGE_1427;Dbxref=GeneID:166201460,InterPro:IPR004363,InterPro:IPR011607,InterPro:IPR018148,PFAM:PF02142,PIR:PIRSF006614,TIGRFAM:TIGR00160,NCBI_GP:EGT81241.1;Name=EGT81241.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||;go_process=methylglyoxal biosynthetic process|0019242||;locus_tag=GGE_1427;product=Methylglyoxal synthase;protein_id=EGT81241.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130218 130668 . - . ID=id-GGE_1427;Dbxref=InterPro:IPR004363,PIR:PIRSF006614;Note=methylglyoxal synthase~methylglyoxal synthase;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130218 130662 . - . ID=id-GGE_1427-2;Dbxref=InterPro:IPR011607;Note=superfamily:SSF52335~methylglyoxal synthase-like~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130227 130662 . - . ID=id-GGE_1427-3;Dbxref=InterPro:IPR011607;Note=Gene3D:3.40.50.1380~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130248 130647 . - . ID=id-GGE_1427-4;Dbxref=InterPro:IPR004363,TIGRFAM:TIGR00160;Note=mgsa: methylglyoxal synthase~methylglyoxal synthase;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130254 130578 . - . ID=id-GGE_1427-5;Dbxref=InterPro:IPR004363;Note=HAMAP:MF_00549~methylglyoxal_synth~methylglyoxal synthase;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130257 130563 . - . ID=id-GGE_1427-6;Note=specific~superfamily%3B label: MGS;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130296 130494 . - . ID=id-GGE_1427-7;Dbxref=InterPro:IPR011607,PFAM:PF02142;Note=mgs~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=mgsA;locus_tag=GGE_1427 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130245 130413 . + . ID=id-AFQR01000022.1:130245..130413;Dbxref=InterPro:IPR018148;Note=PatternScan:PS01335~methylglyoxal_synth~methylglyoxal synthase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130782 130791 . - . ID=id-AFQR01000022.1:130782..130791;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 130970 133630 . + . ID=gene-GGE_1428;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank CDS 130970 133630 . + 0 ID=cds-EGT81242.1;Parent=gene-GGE_1428;Dbxref=GeneID:1171888,InterPro:IPR004660,InterPro:IPR005474,InterPro:IPR009014,InterPro:IPR015941,PFAM:PF00456,PIR:PIRSF000156,TIGRFAM:TIGR00759,NCBI_GP:EGT81242.1;Name=EGT81242.1;Ontology_term=GO:0008152,GO:0055114,GO:0003824,GO:0016491;gbkey=CDS;gene=aceE;go_function=catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1428;product=Pyruvate dehydrogenase E1 component;protein_id=EGT81242.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130970 133628 . + . ID=id-GGE_1428;Dbxref=InterPro:IPR004660,PIR:PIRSF000156;Note=multi-dom~pyruvate dehydrogenase%2C e1 component~2-oxo-acid dehydrogenase e1 component homodimeric type%3B label: aceE;gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 130982 133619 . + . ID=id-GGE_1428-2;Dbxref=InterPro:IPR004660,TIGRFAM:TIGR00759;Note=acee: pyruvate dehydrogenase (acetyl-transfe~2-oxo-acid dehydrogenase e1 component homodimeric type;gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131138 132209 . + . ID=id-GGE_1428-3;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131156 133442 . + . ID=id-GGE_1428-4;Note=HMMPanther:PTHR11624:SF37~subfamily not named~HMMPanther:PTHR11624~family not named;gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131198 132119 . + . ID=id-GGE_1428-5;Note=specific~superfamily%3B label: TPP_E1_EcPDC_like;gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131282 131564 . + . ID=id-GGE_1428-6;Dbxref=InterPro:IPR005474,PFAM:PF00456;Note=transketolase_n~transketolase;gbkey=misc_feature;gene=aceE;locus_tag=GGE_1428 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131288 132056 . - . ID=id-AFQR01000022.1:131288..132056;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131516 133082 . - . ID=id-AFQR01000022.1:131516..133082;Dbxref=InterPro:IPR015941;Note=Gene3D:3.40.50.920~transketolase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131531 132443 . - . ID=id-AFQR01000022.1:131531..132443;Note=superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131534 133067 . - . ID=id-AFQR01000022.1:131534..133067;Dbxref=InterPro:IPR009014;Note=superfamily:SSF52922~tk c-terminal domain-like~transketolase/pyruvate-ferredoxin oxidoreductase%2C domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131567 132407 . - . ID=id-AFQR01000022.1:131567..132407;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 131660 132377 . - . ID=id-AFQR01000022.1:131660..132377;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133668 133677 . - . ID=id-AFQR01000022.1:133668..133677;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 133693 135582 . + . ID=gene-GGE_1429;Name=GGE_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank CDS 133693 135582 . + 0 ID=cds-EGT81243.1;Parent=gene-GGE_1429;Dbxref=GeneID:319776117,InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006256,InterPro:IPR011053,InterPro:IPR023213,PFAM:PF00198,PFAM:PF00364,PFAM:PF02817,TIGRFAM:TIGR01348,NCBI_GP:EGT81243.1;Name=EGT81243.1;Note=YP_004138605;Ontology_term=GO:0006096,GO:0008152,GO:0045254,GO:0008415,GO:0004742;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||;go_function=acyltransferase activity|0008415||,dihydrolipoyllysine-residue acetyltransferase activity|0004742||;go_process=glycolysis|0006096||,metabolic process|0008152||;locus_tag=GGE_1429;product=Dihydrolipoamide acetyltransferase;protein_id=EGT81243.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133693 135580 . + . ID=id-GGE_1429;Note=multi-dom~HMMPanther:PTHR23151:SF19~dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex%2C e2~HMMPanther:PTHR23151~family not named%3B label: aceF;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133693 133981 . + . ID=id-GGE_1429-2;Dbxref=InterPro:IPR011053;Note=superfamily:SSF51230~single hybrid motif~single hybrid motif;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133693 133960 . + . ID=id-GGE_1429-3;Note=Gene3D:2.40.50.100;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133702 135574 . + . ID=id-GGE_1429-4;Dbxref=InterPro:IPR006256,TIGRFAM:TIGR01348;Note=pdhac_trf_long: dihydrolipoyllysine-re~dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133702 133909 . + . ID=id-GGE_1429-5;Dbxref=InterPro:IPR000089;Note=specific~superfamily~ProfileScan:PS50968~biotinyl_lipoyl~biotin/lipoyl attachment%3B label: Biotinyl_lipoyl_domains superfamily;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133702 133906 . + . ID=id-GGE_1429-6;Dbxref=InterPro:IPR000089,PFAM:PF00364;Note=biotin_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133768 133783 . + . ID=id-GGE_1429-7;Dbxref=InterPro:IPR003016;Note=PatternScan:PS00189~lipoyl~2-oxo acid dehydrogenase%2C lipoyl-binding site;gbkey=misc_feature;locus_tag=GGE_1429 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133753 134794 . - . ID=id-AFQR01000022.1:133753..134794;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133768 134215 . - . ID=id-AFQR01000022.1:133768..134215;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133777 134515 . - . ID=id-AFQR01000022.1:133777..134515;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133780 133918 . - . ID=id-AFQR01000022.1:133780..133918;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133783 134359 . - . ID=id-AFQR01000022.1:133783..134359;Dbxref=InterPro:IPR003016;Note=PatternScan:PS00189~lipoyl~2-oxo acid dehydrogenase%2C lipoyl-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133783 134062 . - . ID=id-AFQR01000022.1:133783..134062;Dbxref=InterPro:IPR003016;Note=PatternScan:PS00189~lipoyl~2-oxo acid dehydrogenase%2C lipoyl-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133804 134650 . - . ID=id-AFQR01000022.1:133804..134650;Dbxref=InterPro:IPR004167,PFAM:PF02817;Note=e3_binding~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133810 134644 . - . ID=id-AFQR01000022.1:133810..134644;Note=superfamily%3B label: E3_binding superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133837 134641 . - . ID=id-AFQR01000022.1:133837..134641;Dbxref=InterPro:IPR004167;Note=Gene3D:4.10.320.10~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133846 134623 . - . ID=id-AFQR01000022.1:133846..134623;Dbxref=InterPro:IPR004167;Note=superfamily:SSF47005~peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133900 134005 . - . ID=id-AFQR01000022.1:133900..134005;Note=specific~superfamily%3B label: Biotinyl_lipoyl_domains superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133903 134296 . - . ID=id-AFQR01000022.1:133903..134296;Dbxref=InterPro:IPR000089,PFAM:PF00364;Note=biotin_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133903 133999 . - . ID=id-AFQR01000022.1:133903..133999;Dbxref=InterPro:IPR000089,PFAM:PF00364;Note=biotin_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133909 134293 . - . ID=id-AFQR01000022.1:133909..134293;Dbxref=InterPro:IPR000089;Note=specific~superfamily~ProfileScan:PS50968~biotinyl_lipoyl~biotin/lipoyl attachment%3B label: Biotinyl_lipoyl_domains superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133909 133996 . - . ID=id-AFQR01000022.1:133909..133996;Dbxref=InterPro:IPR000089;Note=ProfileScan:PS50968~biotinyl_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133969 133990 . - . ID=id-AFQR01000022.1:133969..133990;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133975 134284 . - . ID=id-AFQR01000022.1:133975..134284;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133981 133990 . - . ID=id-AFQR01000022.1:133981..133990;Dbxref=InterPro:IPR011053;Note=superfamily:SSF51230~single hybrid motif~single hybrid motif;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 133990 134278 . - . ID=id-AFQR01000022.1:133990..134278;Dbxref=InterPro:IPR011053;Note=superfamily:SSF51230~single hybrid motif~single hybrid motif;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 134389 134884 . - . ID=id-AFQR01000022.1:134389..134884;Dbxref=InterPro:IPR001078,PFAM:PF00198;Note=2-oxoacid_dh~2-oxoacid dehydrogenase acyltransferase%2C catalytic domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 134392 134884 . - . ID=id-AFQR01000022.1:134392..134884;Note=superfamily%3B label: 2-oxoacid_dh superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 134410 134854 . - . ID=id-AFQR01000022.1:134410..134854;Dbxref=InterPro:IPR023213;Note=Gene3D:3.30.559.10~chloramphenicol acetyltransferase-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 134428 134848 . - . ID=id-AFQR01000022.1:134428..134848;Note=superfamily:SSF52777~coa-dependent acyltransferases;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135651 135660 . + . ID=id-AFQR01000022.1:135651..135660;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 135692 137116 . + . ID=gene-GGE_1430;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank CDS 135692 137116 . + 0 ID=cds-EGT81244.1;Parent=gene-GGE_1430;Dbxref=GeneID:1169352,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006258,InterPro:IPR012999,InterPro:IPR013027,InterPro:IPR016156,PFAM:PF00070,PFAM:PF02852,PFAM:PF07992,TIGRFAM:TIGR01350,NCBI_GP:EGT81244.1;Name=EGT81244.1;Ontology_term=GO:0045454,GO:0055114,GO:0005737,GO:0004148,GO:0050660,GO:0016491;gbkey=CDS;gene=lpdA;go_component=cytoplasm|0005737||;go_function=dihydrolipoyl dehydrogenase activity|0004148||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||;go_process=cell redox homeostasis|0045454||,oxidation-reduction process|0055114||;locus_tag=GGE_1430;product=Dihydrolipoyl dehydrogenase;protein_id=EGT81244.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135692 137060 . + . ID=id-GGE_1430;Dbxref=InterPro:IPR006258;Note=HMMPanther:PTHR22912:SF20~dihydrolipoamide dehydrogenase-related~dihydrolipoamide dehydrogenase~HMMPanther:PTHR22912~family not named;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135692 136658 . + . ID=id-GGE_1430-2;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135701 137102 . + . ID=id-GGE_1430-3;Note=multi-dom%3B label: PRK06467;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135710 137075 . + . ID=id-GGE_1430-4;Dbxref=InterPro:IPR006258,TIGRFAM:TIGR01350;Note=lipoamide_dh: dihydrolipoyl dehydrogenas~dihydrolipoamide dehydrogenase;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135716 136619 . + . ID=id-GGE_1430-5;Dbxref=InterPro:IPR013027,PFAM:PF07992;Note=pyr_redox_2~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135716 135761 . + . ID=id-GGE_1430-6;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135719 135797 . + . ID=id-GGE_1430-7;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135719 135752 . + . ID=id-GGE_1430-8;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=lpdA;locus_tag=GGE_1430 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135716 136616 . - . ID=id-AFQR01000022.1:135716..136616;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135722 136118 . - . ID=id-AFQR01000022.1:135722..136118;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135725 135818 . - . ID=id-AFQR01000022.1:135725..135818;Dbxref=InterPro:IPR012999;Note=PatternScan:PS00076~pyridine_redox_1~pyridine nucleotide-disulfide oxidoreductase%2C class i%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135734 136229 . - . ID=id-AFQR01000022.1:135734..136229;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135737 136946 . - . ID=id-AFQR01000022.1:135737..136946;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135737 136487 . - . ID=id-AFQR01000022.1:135737..136487;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135740 136916 . - . ID=id-AFQR01000022.1:135740..136916;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135740 135815 . - . ID=id-AFQR01000022.1:135740..135815;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135743 136484 . - . ID=id-AFQR01000022.1:135743..136484;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135749 136226 . - . ID=id-AFQR01000022.1:135749..136226;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135749 136109 . - . ID=id-AFQR01000022.1:135749..136109;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135755 136982 . - . ID=id-AFQR01000022.1:135755..136982;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135758 136721 . - . ID=id-AFQR01000022.1:135758..136721;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135761 136571 . - . ID=id-AFQR01000022.1:135761..136571;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135770 136226 . - . ID=id-AFQR01000022.1:135770..136226;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135881 136274 . - . ID=id-AFQR01000022.1:135881..136274;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135896 136508 . - . ID=id-AFQR01000022.1:135896..136508;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 135923 136226 . - . ID=id-AFQR01000022.1:135923..136226;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 136019 136733 . - . ID=id-AFQR01000022.1:136019..136733;Dbxref=InterPro:IPR004099,PFAM:PF02852;Note=pyr_redox_dim~pyridine nucleotide-disulfide oxidoreductase%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 136022 136733 . - . ID=id-AFQR01000022.1:136022..136733;Note=superfamily%3B label: Pyr_redox_dim superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 136052 136148 . - . ID=id-AFQR01000022.1:136052..136148;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 136055 136727 . - . ID=id-AFQR01000022.1:136055..136727;Dbxref=InterPro:IPR004099;Note=Gene3D:3.30.390.30~pyridine nucleotide-disulfide oxidoreductase%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 136079 136721 . - . ID=id-AFQR01000022.1:136079..136721;Dbxref=InterPro:IPR016156;Note=superfamily:SSF55424~fad/nad-linked reductases%2C dimerization (c-terminal) domain~fad/nad-linked reductase%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137252 137261 . - . ID=id-AFQR01000022.1:137252..137261;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 137275 137817 . + . ID=gene-GGE_1431;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank CDS 137275 137817 . + 0 ID=cds-EGT81245.1;Parent=gene-GGE_1431;Dbxref=GeneID:1168477,InterPro:IPR000836,InterPro:IPR005764,PFAM:PF00156,TIGRFAM:TIGR01090,NCBI_GP:EGT81245.1;Name=EGT81245.1;Ontology_term=GO:0006168,GO:0009116,GO:0005737,GO:0003999;gbkey=CDS;gene=apt;go_component=cytoplasm|0005737||;go_function=adenine phosphoribosyltransferase activity|0003999||;go_process=adenine salvage|0006168||,nucleoside metabolic process|0009116||;locus_tag=GGE_1431;product=Adenine phosphoribosyltransferase;protein_id=EGT81245.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137287 137803 . + . ID=id-GGE_1431;Note=superfamily%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137290 137803 . + . ID=id-GGE_1431-2;Note=HMMPanther:PTHR11776~family not named;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137290 137797 . + . ID=id-GGE_1431-3;Note=Gene3D:3.40.50.2020~superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137293 137785 . + . ID=id-GGE_1431-4;Dbxref=InterPro:IPR005764;Note=HAMAP:MF_00004~aden_phosphoribosyltr~adenine phosphoribosyl transferase;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137299 137785 . + . ID=id-GGE_1431-5;Dbxref=InterPro:IPR005764,TIGRFAM:TIGR01090;Note=apt: adenine phosphoribosyltransferase~adenine phosphoribosyl transferase;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137368 137644 . + . ID=id-GGE_1431-6;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=apt;locus_tag=GGE_1431 GCA_000222085.2|AFQR01000022.1 Genbank gene 137829 139895 . + . ID=gene-GGE_1432;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank CDS 137829 139895 . + 0 ID=cds-EGT81246.1;Parent=gene-GGE_1432;Dbxref=GeneID:1169397,InterPro:IPR003959,InterPro:IPR008921,InterPro:IPR012763,InterPro:IPR021029,InterPro:IPR022754,PFAM:PF00004,PFAM:PF12169,PFAM:PF12170,TIGRFAM:TIGR02397,NCBI_GP:EGT81246.1;Name=EGT81246.1;Ontology_term=GO:0006260,GO:0009360,GO:0005524,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_1432;product=DNA polymerase III subunit gamma/tau;protein_id=EGT81246.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137829 139893 . + . ID=id-GGE_1432;Note=multi-dom%3B label: PRK07994;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137829 138642 . + . ID=id-GGE_1432-2;Note=HMMPanther:PTHR11669~family not named;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137838 138882 . + . ID=id-GGE_1432-3;Dbxref=InterPro:IPR012763,TIGRFAM:TIGR02397;Note=dnax_nterm: dna polymerase iii%2C subunit ga~dna polymerase iii%2C subunit gamma/ tau;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137838 138549 . + . ID=id-GGE_1432-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137874 138285 . + . ID=id-GGE_1432-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137886 138285 . + . ID=id-GGE_1432-6;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137955 138219 . + . ID=id-GGE_1432-7;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature;gene=dnaX;locus_tag=GGE_1432 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137862 138933 . - . ID=id-AFQR01000022.1:137862..138933;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 137895 139086 . - . ID=id-AFQR01000022.1:137895..139086;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138057 138330 . - . ID=id-AFQR01000022.1:138057..138330;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138111 138240 . - . ID=id-AFQR01000022.1:138111..138240;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138177 138558 . - . ID=id-AFQR01000022.1:138177..138558;Note=Gene3D:1.20.272.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138195 138558 . - . ID=id-AFQR01000022.1:138195..138558;Dbxref=InterPro:IPR008921;Note=superfamily:SSF48019~dna polymerase iii clamp loader subunits domain~dna polymerase iii%2C clamp loader complex%2C gamma/delta/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138201 138525 . - . ID=id-AFQR01000022.1:138201..138525;Dbxref=InterPro:IPR022754,PFAM:PF12169;Note=superfamily~dna_pol3_gamma3~dna polymerase iii%2C gamma subunit%2C domain iii%3B label: DNA_pol3_gamma3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138249 139467 . - . ID=id-AFQR01000022.1:138249..139467;Dbxref=InterPro:IPR021029,PFAM:PF12170;Note=dna_pol3_tau_5~dna polymerase iii%2C tau subunit%2C domain v;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 138255 139461 . - . ID=id-AFQR01000022.1:138255..139461;Note=superfamily%3B label: DNA_pol3_tau_5 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 140019 140645 . + . ID=gene-GGE_1433;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank CDS 140019 140645 . + 0 ID=cds-EGT81247.1;Parent=gene-GGE_1433;Dbxref=GeneID:81335339,InterPro:IPR000836,InterPro:IPR005765,PFAM:PF00156,TIGRFAM:TIGR01091,NCBI_GP:EGT81247.1;Name=EGT81247.1;Ontology_term=GO:0009116,GO:0006223,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||;go_process=nucleoside metabolic process|0009116||,uracil salvage|0006223||;locus_tag=GGE_1433;product=Uracil phosphoribosyltransferase;protein_id=EGT81247.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140019 140643 . + . ID=id-GGE_1433;Note=superfamily~Gene3D:3.40.50.2020%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=upp;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140025 140640 . + . ID=id-GGE_1433-2;Dbxref=InterPro:IPR005765,TIGRFAM:TIGR01091;Note=upp: uracil phosphoribosyltransferase~uracil phosphoribosyl transferase;gbkey=misc_feature;gene=upp;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140028 140637 . + . ID=id-GGE_1433-3;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=upp;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140070 140595 . + . ID=id-GGE_1433-4;Note=HMMPanther:PTHR10285:SF29~phosphoribulokinase~HMMPanther:PTHR10285~uridine kinase;gbkey=misc_feature;gene=upp;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140208 140313 . + . ID=id-GGE_1433-5;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=upp;locus_tag=GGE_1433 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140713 140722 . - . ID=id-AFQR01000022.1:140713..140722;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 140754 141998 . + . ID=gene-GGE_1434;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=GGE_1434 GCA_000222085.2|AFQR01000022.1 Genbank CDS 140754 141998 . + 0 ID=cds-EGT81248.1;Parent=gene-GGE_1434;Dbxref=GeneID:1174883,InterPro:IPR006042,InterPro:IPR006043,PFAM:PF00860,TIGRFAM:TIGR00801,NCBI_GP:EGT81248.1;Name=EGT81248.1;Ontology_term=GO:0055085,GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=uraA;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1434;product=Putative uracil permease;protein_id=EGT81248.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140754 141996 . + . ID=id-GGE_1434;Dbxref=InterPro:IPR006043;Note=HMMPanther:PTHR11119:SF10~subfamily not named~HMMPanther:PTHR11119~family not named~xanthine/uracil/vitamin c permease;gbkey=misc_feature;gene=uraA;locus_tag=GGE_1434 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140790 141936 . + . ID=id-GGE_1434-2;Dbxref=InterPro:IPR006042,TIGRFAM:TIGR00801;Note=superfamily~ncs2: uracil-xanthine permease~xanthine/uracil permease%3B label: Xan_ur_permease superfamily;gbkey=misc_feature;gene=uraA;locus_tag=GGE_1434 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140805 141855 . + . ID=id-GGE_1434-3;Dbxref=InterPro:IPR006043,PFAM:PF00860;Note=xan_ur_permease~xanthine/uracil/vitamin c permease;gbkey=misc_feature;gene=uraA;locus_tag=GGE_1434 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140814 140823 . + . ID=id-GGE_1434-4;Note=transmembrane_regions;gbkey=misc_feature;gene=uraA;locus_tag=GGE_1434 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140790 140892 . - . ID=id-AFQR01000022.1:140790..140892;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140796 141552 . - . ID=id-AFQR01000022.1:140796..141552;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140805 141228 . - . ID=id-AFQR01000022.1:140805..141228;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140805 141117 . - . ID=id-AFQR01000022.1:140805..141117;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140808 141849 . - . ID=id-AFQR01000022.1:140808..141849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140814 141915 . - . ID=id-AFQR01000022.1:140814..141915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140817 141741 . - . ID=id-AFQR01000022.1:140817..141741;Dbxref=InterPro:IPR006042;Note=PatternScan:PS01116~xanth_uracil_permase~xanthine/uracil permease;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141747 . - . ID=id-AFQR01000022.1:140823..141747;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141666 . - . ID=id-AFQR01000022.1:140823..141666;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141435 . - . ID=id-AFQR01000022.1:140823..141435;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141300 . - . ID=id-AFQR01000022.1:140823..141300;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141213 . - . ID=id-AFQR01000022.1:140823..141213;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141117 . - . ID=id-AFQR01000022.1:140823..141117;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 141015 . - . ID=id-AFQR01000022.1:140823..141015;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 140823 140919 . - . ID=id-AFQR01000022.1:140823..140919;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 142069 142764 . + . ID=gene-GGE_1435;Name=GGE_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank CDS 142069 142764 . + 0 ID=cds-EGT81249.1;Parent=gene-GGE_1435;Dbxref=GeneID:6136705,InterPro:IPR013317,InterPro:IPR017788,InterPro:IPR020591,PFAM:PF00308,TIGRFAM:TIGR03420,NCBI_GP:EGT81249.1;Name=EGT81249.1;Note=HI_1225.1;Ontology_term=GO:0032297;gbkey=CDS;go_process=negative regulation of DNA-dependent DNA replication initiation|0032297||;locus_tag=GGE_1435;product=putative chromosomal replication control%2C initiator DnaA/regulator Hda;protein_id=EGT81249.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142078 142756 . + . ID=id-GGE_1435;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142078 142546 . + . ID=id-GGE_1435-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142081 142750 . + . ID=id-GGE_1435-3;Dbxref=InterPro:IPR017788,TIGRFAM:TIGR03420;Note=dnaa_homol_hda: dnaa regulatory inacti~chromosomal replication control%2C regulator hda;gbkey=misc_feature;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142096 142675 . + . ID=id-GGE_1435-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142195 142567 . + . ID=id-GGE_1435-5;Dbxref=InterPro:IPR013317,PFAM:PF00308;Note=bac_dnaa~chromosomal replication control%2C initiator (dnaa)/regulator (hda);gbkey=misc_feature;locus_tag=GGE_1435 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142132 142192 . - . ID=id-AFQR01000022.1:142132..142192;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142153 142456 . - . ID=id-AFQR01000022.1:142153..142456;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142267 142564 . - . ID=id-AFQR01000022.1:142267..142564;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 142792 143115 . - . ID=gene-GGE_1436;Name=GGE_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank CDS 142792 143115 . - 0 ID=cds-EGT81250.1;Parent=gene-GGE_1436;Dbxref=GeneID:1175674,InterPro:IPR001950,InterPro:IPR005872,PFAM:PF01253,PIR:PIRSF037511,TIGRFAM:TIGR01158,NCBI_GP:EGT81250.1;Name=EGT81250.1;Note=HI_1225;Ontology_term=GO:0006412,GO:0006413,GO:0003743;gbkey=CDS;go_function=translation initiation factor activity|0003743||;go_process=translation|0006412||,translational initiation|0006413||;locus_tag=GGE_1436;product=putative translation initiation factor SUI1;protein_id=EGT81250.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142792 143113 . - . ID=id-GGE_1436;Dbxref=InterPro:IPR005872,PIR:PIRSF037511;Note=translation initiation factor 1%2C prokaryotic type~archaeal/bacterial translation initiation factor sui1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142801 143107 . - . ID=id-GGE_1436-2;Note=multi-dom%3B label: PRK06824;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142813 143095 . - . ID=id-GGE_1436-3;Dbxref=InterPro:IPR005872,TIGRFAM:TIGR01158;Note=sui1_rel: putative translation initiation fa~archaeal/bacterial translation initiation factor sui1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142873 143035 . - . ID=id-GGE_1436-4;Dbxref=InterPro:IPR001950;Note=superfamily:SSF55159~eif1-like~translation initiation factor sui1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142873 143023 . - . ID=id-GGE_1436-5;Dbxref=InterPro:IPR001950,PFAM:PF01253;Note=sui1~translation initiation factor sui1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142876 143032 . - . ID=id-GGE_1436-6;Note=Gene3D:3.30.780.10;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142888 142999 . - . ID=id-GGE_1436-7;Note=specific~superfamily%3B label: SUI1_eIF1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142891 142993 . - . ID=id-GGE_1436-8;Dbxref=InterPro:IPR001950;Note=ProfileScan:PS50296~sui1~translation initiation factor sui1;gbkey=misc_feature;locus_tag=GGE_1436 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 142828 142963 . + . ID=id-AFQR01000022.1:142828..142963;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 143118 143810 . - . ID=gene-GGE_1437;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank CDS 143118 143810 . - 0 ID=cds-EGT81251.1;Parent=gene-GGE_1437;Dbxref=GeneID:167012572,InterPro:IPR001754,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR014732,InterPro:IPR018089,PFAM:PF00215,TIGRFAM:TIGR01740,NCBI_GP:EGT81251.1;Name=EGT81251.1;Ontology_term=GO:0044205,GO:0006207,GO:0008152,GO:0003824,GO:0004590;gbkey=CDS;gene=pyrF;go_function=catalytic activity|0003824||,orotidine-5'-phosphate decarboxylase activity|0004590||;go_process='de novo' UMP biosynthetic process|0044205||,'de novo' pyrimidine base biosynthetic process|0006207||,metabolic process|0008152||;locus_tag=GGE_1437;product=putative decarboxylase-like protein;protein_id=EGT81251.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143118 143805 . - . ID=id-GGE_1437;Dbxref=InterPro:IPR011060;Note=superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143127 143802 . - . ID=id-GGE_1437-2;Note=HMMPanther:PTHR19278:SF1~subfamily not named~HMMPanther:PTHR19278~family not named;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143127 143799 . - . ID=id-GGE_1437-3;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143127 143784 . - . ID=id-GGE_1437-4;Dbxref=InterPro:IPR001754,PFAM:PF00215;Note=ompdecase~orotidine 5'-phosphate decarboxylase domain;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143133 143784 . - . ID=id-GGE_1437-5;Dbxref=InterPro:IPR014732,TIGRFAM:TIGR01740;Note=pyrf: orotidine 5'-phosphate decarboxylase~orotidine 5'-phosphate decarboxylase;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143133 143781 . - . ID=id-GGE_1437-6;Note=specific~superfamily%3B label: OMP_decarboxylase_like;gbkey=misc_feature;gene=pyrF;locus_tag=GGE_1437 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143160 143286 . + . ID=id-AFQR01000022.1:143160..143286;Dbxref=InterPro:IPR018089;Note=PatternScan:PS00156~ompdecase~orotidine 5'-phosphate decarboxylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 143834 145024 . - . ID=gene-GGE_1438;Name=GGE_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank CDS 143834 145024 . - 0 ID=cds-EGT81252.1;Parent=gene-GGE_1438;Dbxref=GeneID:145629275,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,NCBI_GP:EGT81252.1;Name=EGT81252.1;Note=ZP_01785074;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_1438;product=putative tetratricopeptide-like helical;protein_id=EGT81252.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143834 145022 . - . ID=id-GGE_1438;Note=multi-dom%3B label: PRK11788;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143840 143858 . - . ID=id-GGE_1438-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143921 144728 . - . ID=id-GGE_1438-3;Note=HMMPanther:PTHR23083:SF37~subfamily not named~HMMPanther:PTHR23083~family not named;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143930 144521 . - . ID=id-GGE_1438-4;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143960 144533 . - . ID=id-GGE_1438-5;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 144413 144422 . - . ID=id-GGE_1438-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1438 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143900 144524 . + . ID=id-AFQR01000022.1:143900..144524;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143915 144920 . + . ID=id-AFQR01000022.1:143915..144920;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143933 144065 . + . ID=id-AFQR01000022.1:143933..144065;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143936 144497 . + . ID=id-AFQR01000022.1:143936..144497;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 143936 144281 . + . ID=id-AFQR01000022.1:143936..144281;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 144146 144284 . + . ID=id-AFQR01000022.1:144146..144284;Note=specific~superfamily%3B label: TPR;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 144152 144281 . + . ID=id-AFQR01000022.1:144152..144281;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 145024 145317 . - . ID=gene-GGE_1439;Name=GGE_1439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1439 GCA_000222085.2|AFQR01000022.1 Genbank CDS 145024 145317 . - 0 ID=cds-EGT81253.1;Parent=gene-GGE_1439;Dbxref=GeneID:1175581,InterPro:IPR010445,PFAM:PF06305,NCBI_GP:EGT81253.1;Name=EGT81253.1;Note=HI_1222;gbkey=CDS;locus_tag=GGE_1439;product=hypothetical protein;protein_id=EGT81253.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145039 145084 . - . ID=id-GGE_1439;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1439 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145039 145075 . - . ID=id-GGE_1439-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1439 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145060 145261 . - . ID=id-GGE_1439-3;Dbxref=InterPro:IPR010445,PFAM:PF06305;Note=duf1049~protein of unknown function duf1049;gbkey=misc_feature;locus_tag=GGE_1439 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145090 145252 . - . ID=id-GGE_1439-4;Note=superfamily%3B label: DUF1049 superfamily;gbkey=misc_feature;locus_tag=GGE_1439 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145063 145168 . + . ID=id-AFQR01000022.1:145063..145168;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145093 145156 . + . ID=id-AFQR01000022.1:145093..145156;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 145398 145679 . - . ID=gene-GGE_1440;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=GGE_1440 GCA_000222085.2|AFQR01000022.1 Genbank CDS 145398 145679 . - 0 ID=cds-EGT81254.1;Parent=gene-GGE_1440;Dbxref=InterPro:IPR000119,InterPro:IPR005685,InterPro:IPR010992,PFAM:PF00216,TIGRFAM:TIGR00988,NCBI_GP:EGT81254.1;Name=EGT81254.1;Ontology_term=GO:0006310,GO:0006355,GO:0005694,GO:0003677;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||;go_function=DNA binding|0003677||;go_process=DNA recombination|0006310||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1440;product=Integration host factor subunit beta;protein_id=EGT81254.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145398 145677 . - . ID=id-GGE_1440;Dbxref=InterPro:IPR005685,TIGRFAM:TIGR00988;Note=HAMAP:MF_00381~ihf_beta~integration host factor%2C beta subunit~hip: integration host factor%2C beta subunit~integration host factor%2C beta subunit;gbkey=misc_feature;gene=ihfB;locus_tag=GGE_1440 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145398 145671 . - . ID=id-GGE_1440-2;Dbxref=InterPro:IPR000119,InterPro:IPR010992;Note=superfamily:SSF47729~ihf-like dna-binding proteins~ihf-like dna-binding~Gene3D:4.10.520.10~histone-like bacterial dna-binding protein;gbkey=misc_feature;gene=ihfB;locus_tag=GGE_1440 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145398 145668 . - . ID=id-GGE_1440-3;Dbxref=InterPro:IPR000119,PFAM:PF00216;Note=bac_dna_binding~histone-like bacterial dna-binding protein;gbkey=misc_feature;gene=ihfB;locus_tag=GGE_1440 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145404 145662 . - . ID=id-GGE_1440-4;Note=specific~superfamily%3B label: HU_IHF;gbkey=misc_feature;gene=ihfB;locus_tag=GGE_1440 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145439 145448 . + . ID=id-AFQR01000022.1:145439..145448;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145440 145575 . + . ID=id-AFQR01000022.1:145440..145575;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145443 145623 . + . ID=id-AFQR01000022.1:145443..145623;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145446 145521 . + . ID=id-AFQR01000022.1:145446..145521;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 145801 147450 . - . ID=gene-GGE_1441;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank CDS 145801 147450 . - 0 ID=cds-EGT81255.1;Parent=gene-GGE_1441;Dbxref=GeneID:2500383,InterPro:IPR000110,InterPro:IPR003029,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018032,PFAM:PF00575,TIGRFAM:TIGR00717,NCBI_GP:EGT81255.1;Name=EGT81255.1;Ontology_term=GO:0006412,GO:0005840,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1441;product=30S ribosomal protein S1;protein_id=EGT81255.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145801 147331 . - . ID=id-GGE_1441;Note=multi-dom%3B label: rpsA;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145801 147145 . - . ID=id-GGE_1441-2;Note=HMMPanther:PTHR10724~s1 rna-binding domain-containing protein 1;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145801 146140 . - . ID=id-GGE_1441-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145810 147331 . - . ID=id-GGE_1441-4;Dbxref=InterPro:IPR018032,TIGRFAM:TIGR00717;Note=rpsa: ribosomal protein s1~ribosomal s1 synthesis/modification protein;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145858 146005 . - . ID=id-GGE_1441-5;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145864 146035 . - . ID=id-GGE_1441-6;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145864 146002 . - . ID=id-GGE_1441-7;Dbxref=InterPro:IPR003029;Note=specific~superfamily~ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain%3B label: S1_like superfamily;gbkey=misc_feature;gene=rpsA;locus_tag=GGE_1441 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145846 145918 . + . ID=id-AFQR01000022.1:145846..145918;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145852 146125 . + . ID=id-AFQR01000022.1:145852..146125;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145855 146179 . + . ID=id-AFQR01000022.1:145855..146179;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145858 146791 . + . ID=id-AFQR01000022.1:145858..146791;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145858 145864 . + . ID=id-AFQR01000022.1:145858..145864;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145861 146671 . + . ID=id-AFQR01000022.1:145861..146671;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145861 146053 . + . ID=id-AFQR01000022.1:145861..146053;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145864 146266 . + . ID=id-AFQR01000022.1:145864..146266;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145867 146437 . + . ID=id-AFQR01000022.1:145867..146437;Dbxref=InterPro:IPR000110;Note=FPrintScan:PR00681~ribosomals1~ribosomal protein s1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145873 147334 . + . ID=id-AFQR01000022.1:145873..147334;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145981 147154 . + . ID=id-AFQR01000022.1:145981..147154;Note=superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145987 147154 . + . ID=id-AFQR01000022.1:145987..147154;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 145993 147148 . + . ID=id-AFQR01000022.1:145993..147148;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146002 146116 . + . ID=id-AFQR01000022.1:146002..146116;Dbxref=InterPro:IPR003029;Note=specific~superfamily~ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146005 146374 . + . ID=id-AFQR01000022.1:146005..146374;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146008 146893 . + . ID=id-AFQR01000022.1:146008..146893;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146008 146377 . + . ID=id-AFQR01000022.1:146008..146377;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146008 146110 . + . ID=id-AFQR01000022.1:146008..146110;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146011 146374 . + . ID=id-AFQR01000022.1:146011..146374;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146014 146893 . + . ID=id-AFQR01000022.1:146014..146893;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146014 146632 . + . ID=id-AFQR01000022.1:146014..146632;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146017 146623 . + . ID=id-AFQR01000022.1:146017..146623;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146023 146884 . + . ID=id-AFQR01000022.1:146023..146884;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146023 146623 . + . ID=id-AFQR01000022.1:146023..146623;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146026 146098 . + . ID=id-AFQR01000022.1:146026..146098;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146032 147121 . + . ID=id-AFQR01000022.1:146032..147121;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146035 146641 . + . ID=id-AFQR01000022.1:146035..146641;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146047 146875 . + . ID=id-AFQR01000022.1:146047..146875;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146047 146074 . + . ID=id-AFQR01000022.1:146047..146074;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146056 146368 . + . ID=id-AFQR01000022.1:146056..146368;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146059 146884 . + . ID=id-AFQR01000022.1:146059..146884;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146059 146590 . + . ID=id-AFQR01000022.1:146059..146590;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146065 146377 . + . ID=id-AFQR01000022.1:146065..146377;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 146119 147088 . + . ID=id-AFQR01000022.1:146119..147088;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 147547 148224 . - . ID=gene-GGE_1442;Name=cmk1;gbkey=Gene;gene=cmk1;gene_biotype=protein_coding;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank CDS 147547 148224 . - 0 ID=cds-EGT81256.1;Parent=gene-GGE_1442;Dbxref=GeneID:1170627,InterPro:IPR003136,InterPro:IPR011994,PFAM:PF02224,TIGRFAM:TIGR00017,NCBI_GP:EGT81256.1;Name=EGT81256.1;Ontology_term=GO:0006139,GO:0005524,GO:0004127;gbkey=CDS;gene=cmk1;go_function=ATP binding|0005524||,cytidylate kinase activity|0004127||;go_process=nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||;locus_tag=GGE_1442;product=Cytidylate kinase 1;protein_id=EGT81256.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147547 148222 . - . ID=id-GGE_1442;Dbxref=InterPro:IPR003136;Note=HMMPanther:PTHR21299:SF2~cytidylate kinase (ck) (cytidine monophosphate kinase) (cmp kinase)~cytidylate kinase~HMMPanther:PTHR21299~family not named;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147547 148207 . - . ID=id-GGE_1442-2;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: cmk;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147547 148198 . - . ID=id-GGE_1442-3;Dbxref=InterPro:IPR003136,TIGRFAM:TIGR00017;Note=cmk: cytidylate kinase~cytidylate kinase;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147553 148207 . - . ID=id-GGE_1442-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147559 148198 . - . ID=id-GGE_1442-5;Dbxref=InterPro:IPR003136;Note=HAMAP:MF_00238~cytidyl_kinase_type1~cytidylate kinase;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147559 148144 . - . ID=id-GGE_1442-6;Note=specific~superfamily%3B label: CMPK;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 147724 148015 . - . ID=id-GGE_1442-7;Dbxref=InterPro:IPR011994,PFAM:PF02224;Note=cytidylate_kin~cytidylate kinase domain;gbkey=misc_feature;gene=cmk1;locus_tag=GGE_1442 GCA_000222085.2|AFQR01000022.1 Genbank gene 148499 150097 . + . ID=gene-GGE_1443;Name=GGE_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank CDS 148499 150097 . + 0 ID=cds-EGT81257.1;Parent=gene-GGE_1443;Dbxref=GeneID:2495690,InterPro:IPR003804,PFAM:PF02652,TIGRFAM:TIGR00795,NCBI_GP:EGT81257.1;Name=EGT81257.1;Note=HI_1218;Ontology_term=GO:0015727,GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||;go_process=lactate transport|0015727||;locus_tag=GGE_1443;product=Putative L-lactate permease;protein_id=EGT81257.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148499 150080 . + . ID=id-GGE_1443;Dbxref=InterPro:IPR003804,TIGRFAM:TIGR00795;Note=lctp: transporter%2C lactate permease (lctp) f~l-lactate permease;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148499 149999 . + . ID=id-GGE_1443-2;Note=superfamily%3B label: Lactate_perm superfamily;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148505 150068 . + . ID=id-GGE_1443-3;Dbxref=InterPro:IPR003804,PFAM:PF02652;Note=lactate_perm~l-lactate permease;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148505 149996 . + . ID=id-GGE_1443-4;Note=multi-dom%3B label: PRK09695;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148505 148553 . + . ID=id-GGE_1443-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 148568 . + . ID=id-GGE_1443-6;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1443 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148538 149072 . - . ID=id-AFQR01000022.1:148538..149072;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148559 149219 . - . ID=id-AFQR01000022.1:148559..149219;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 150023 . - . ID=id-AFQR01000022.1:148568..150023;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 150002 . - . ID=id-AFQR01000022.1:148568..150002;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149921 . - . ID=id-AFQR01000022.1:148568..149921;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149750 . - . ID=id-AFQR01000022.1:148568..149750;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149663 . - . ID=id-AFQR01000022.1:148568..149663;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149537 . - . ID=id-AFQR01000022.1:148568..149537;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149423 . - . ID=id-AFQR01000022.1:148568..149423;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149312 . - . ID=id-AFQR01000022.1:148568..149312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149138 . - . ID=id-AFQR01000022.1:148568..149138;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 149045 . - . ID=id-AFQR01000022.1:148568..149045;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 148934 . - . ID=id-AFQR01000022.1:148568..148934;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 148853 . - . ID=id-AFQR01000022.1:148568..148853;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 148568 148655 . - . ID=id-AFQR01000022.1:148568..148655;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150114 150123 . - . ID=id-AFQR01000022.1:150114..150123;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150250 150259 . + . ID=id-AFQR01000022.1:150250..150259;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 150461 153205 . + . ID=gene-GGE_1444;Name=GGE_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank CDS 150461 153205 . + 0 ID=cds-EGT81258.1;Parent=gene-GGE_1444;Dbxref=GeneID:325578215,InterPro:IPR000531,InterPro:IPR012910,PFAM:PF00593,PFAM:PF07715,NCBI_GP:EGT81258.1;Name=EGT81258.1;Note=ZP_08148350;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1444;product=outer membrane receptor protein%2C mostly Fe transport;protein_id=EGT81258.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150482 150497 . + . ID=id-GGE_1444;Note=seg;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150518 151184 . + . ID=id-GGE_1444-2;Note=multi-dom%3B label: CirA;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150557 153110 . + . ID=id-GGE_1444-3;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150629 150788 . + . ID=id-GGE_1444-4;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150650 150761 . + . ID=id-GGE_1444-5;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150650 150749 . + . ID=id-GGE_1444-6;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1444 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150491 151082 . - . ID=id-AFQR01000022.1:150491..151082;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150512 153155 . - . ID=id-AFQR01000022.1:150512..153155;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 150521 151625 . - . ID=id-AFQR01000022.1:150521..151625;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 151466 152198 . - . ID=id-AFQR01000022.1:151466..152198;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 151547 152120 . - . ID=id-AFQR01000022.1:151547..152120;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 152044 152053 . - . ID=id-AFQR01000022.1:152044..152053;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 153303 153992 . - . ID=gene-GGE_1445;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=GGE_1445 GCA_000222085.2|AFQR01000022.1 Genbank CDS 153303 153992 . - 0 ID=cds-EGT81259.1;Parent=gene-GGE_1445;Dbxref=GeneID:1172449,InterPro:IPR000845,InterPro:IPR010049,InterPro:IPR018017,PFAM:PF01048,TIGRFAM:TIGR01704,NCBI_GP:EGT81259.1;Name=EGT81259.1;Ontology_term=GO:0019509,GO:0009164,GO:0009116,GO:0008782,GO:0003824,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||,catalytic activity|0003824||,methylthioadenosine nucleosidase activity|0008930||;go_process=L-methionine salvage from methylthioadenosine|0019509||,nucleoside catabolic process|0009164||,nucleoside metabolic process|0009116||;locus_tag=GGE_1445;product=putative nucleosidase-like protein;protein_id=EGT81259.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 153303 153990 . - . ID=id-GGE_1445;Note=superfamily~Gene3D:3.40.50.1580~superfamily:SSF53167~purine and uridine phosphorylases%3B label: PNP_UDP_1 superfamily;gbkey=misc_feature;gene=mtnN;locus_tag=GGE_1445 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 153309 153987 . - . ID=id-GGE_1445-2;Dbxref=InterPro:IPR010049,TIGRFAM:TIGR01704;Note=mta/sah-nsdase: mta/sah nucleosidase~mta/sah nucleosidase~HAMAP:MF_01684~salvage_tnn~mta/sah nucleosidase;gbkey=misc_feature;gene=mtnN;locus_tag=GGE_1445 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 153309 153978 . - . ID=id-GGE_1445-3;Dbxref=InterPro:IPR000845,PFAM:PF01048;Note=pnp_udp_1~nucleoside phosphorylase domain;gbkey=misc_feature;gene=mtnN;locus_tag=GGE_1445 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 153312 153984 . - . ID=id-GGE_1445-4;Dbxref=InterPro:IPR018017;Note=HMMPanther:PTHR21234:SF6~mta/sah nucleosidase~HMMPanther:PTHR21234~family not named~nucleoside phosphorylase;gbkey=misc_feature;gene=mtnN;locus_tag=GGE_1445 GCA_000222085.2|AFQR01000022.1 Genbank gene 153992 154696 . - . ID=gene-GGE_1446;Name=GGE_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank CDS 153992 154696 . - 0 ID=cds-EGT81260.1;Parent=gene-GGE_1446;Dbxref=GeneID:1175579,InterPro:IPR001853,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF01323,NCBI_GP:EGT81260.1;Name=EGT81260.1;Note=HI_1215;Ontology_term=GO:0030288,GO:0015035;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=protein disulfide oxidoreductase activity|0015035||;locus_tag=GGE_1446;product=putative dSBA-like thioredoxin domain-containing protein;protein_id=EGT81260.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154010 154049 . - . ID=id-GGE_1446;Note=seg;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154013 154046 . - . ID=id-GGE_1446-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154127 154556 . - . ID=id-GGE_1446-3;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154133 154538 . - . ID=id-GGE_1446-4;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154139 154535 . - . ID=id-GGE_1446-5;Note=specific~superfamily%3B label: DsbA_DsbA;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154208 154403 . - . ID=id-GGE_1446-6;Dbxref=InterPro:IPR001853,PFAM:PF01323;Note=dsba~dsba-like thioredoxin domain;gbkey=misc_feature;locus_tag=GGE_1446 GCA_000222085.2|AFQR01000022.1 Genbank gene 154689 156416 . - . ID=gene-GGE_1447;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank CDS 154689 156416 . - 0 ID=cds-EGT81261.1;Parent=gene-GGE_1447;Dbxref=GeneID:1172895,InterPro:IPR001667,InterPro:IPR003156,InterPro:IPR004610,PFAM:PF01368,PFAM:PF02272,TIGRFAM:TIGR00644,NCBI_GP:EGT81261.1;Name=EGT81261.1;Ontology_term=GO:0006310,GO:0006281,GO:0008409,GO:0016787,GO:0030145,GO:0003676;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||,hydrolase activity|0016787||,manganese ion binding|0030145||,nucleic acid binding|0003676||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_1447;product=Single-stranded-DNA-specific exonuclease recJ;protein_id=EGT81261.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154704 156396 . - . ID=id-GGE_1447;Note=multi-dom%3B label: PRK11070;gbkey=misc_feature;gene=recJ;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154743 156348 . - . ID=id-GGE_1447-2;Dbxref=InterPro:IPR004610,TIGRFAM:TIGR00644;Note=recj: single-stranded-dna-specific exonuclea~bacterial recj exonuclease;gbkey=misc_feature;gene=recJ;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154821 155946 . - . ID=id-GGE_1447-3;Note=superfamily:SSF64182~dhh phosphoesterases;gbkey=misc_feature;gene=recJ;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154878 155187 . - . ID=id-GGE_1447-4;Note=superfamily%3B label: DHH superfamily;gbkey=misc_feature;gene=recJ;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154884 155178 . - . ID=id-GGE_1447-5;Dbxref=InterPro:IPR001667,PFAM:PF01368;Note=dhh~phosphoesterase%2C recj-like;gbkey=misc_feature;gene=recJ;locus_tag=GGE_1447 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154896 155817 . + . ID=id-AFQR01000022.1:154896..155817;Dbxref=InterPro:IPR003156,PFAM:PF02272;Note=dhha1~phosphoesterase%2C dhha1;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 154899 155817 . + . ID=id-AFQR01000022.1:154899..155817;Note=superfamily%3B label: DHHA1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 155383 155392 . + . ID=id-AFQR01000022.1:155383..155392;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 156703 157392 . - . ID=gene-GGE_1448;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank CDS 156703 157392 . - 0 ID=cds-EGT81262.1;Parent=gene-GGE_1448;Dbxref=InterPro:IPR009094,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR018950,PFAM:PF10411,NCBI_GP:EGT81262.1;Name=EGT81262.1;gbkey=CDS;gene=dsbC;locus_tag=GGE_1448;product=Thiol:disulfide interchange protein DsbC;protein_id=EGT81262.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156724 156748 . - . ID=id-GGE_1448;Note=seg;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156763 156880 . - . ID=id-GGE_1448-2;Dbxref=InterPro:IPR009094,InterPro:IPR018950;Note=Gene3D:3.10.450.70~disulphide bond isomerase%2C dsbc~superfamily:SSF54423~dsbc/dsbg n-terminal domain-like~disulphide bond isomerase%2C dsbc/g;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156772 156865 . - . ID=id-GGE_1448-3;Dbxref=InterPro:IPR018950,PFAM:PF10411;Note=dsbc_n~disulphide bond isomerase%2C dsbc/g;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156808 157273 . - . ID=id-GGE_1448-4;Note=specific~superfamily%3B label: DsbA_DsbC_DsbG;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156940 157153 . - . ID=id-GGE_1448-5;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 156991 157099 . - . ID=id-GGE_1448-6;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=dsbC;locus_tag=GGE_1448 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157367 157376 . + . ID=id-AFQR01000022.1:157367..157376;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 157772 158623 . + . ID=gene-GGE_1449;Name=GGE_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank CDS 157772 158623 . + 0 ID=cds-EGT81263.1;Parent=gene-GGE_1449;Dbxref=InterPro:IPR000352,InterPro:IPR004374,InterPro:IPR005139,PFAM:PF00472,PFAM:PF03462,TIGRFAM:TIGR00020,NCBI_GP:EGT81263.1;Name=EGT81263.1;Note=Hypothetical peptide chain release factor class I/class II;Ontology_term=GO:0006415,GO:0005737,GO:0016149,GO:0003747;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=translation release factor activity codon specific|0016149||,translation release factor activity|0003747||;go_process=translational termination|0006415||;locus_tag=GGE_1449;product=putative peptide chain release factor class I/class II;protein_id=EGT81263.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157772 158621 . + . ID=id-GGE_1449;Dbxref=InterPro:IPR004374,TIGRFAM:TIGR00020;Note=prfb: peptide chain release factor~peptide chain release factor 2~superfamily:SSF75620~release factor;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157772 158612 . + . ID=id-GGE_1449-2;Dbxref=InterPro:IPR004374;Note=HMMPanther:PTHR11075:SF6~peptide chain release factor 2~peptide chain release factor 2~HMMPanther:PTHR11075~family not named;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157772 157808 . + . ID=id-GGE_1449-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157793 158093 . + . ID=id-GGE_1449-4;Dbxref=InterPro:IPR005139,PFAM:PF03462;Note=pcrf~peptide chain release factor;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157793 157859 . + . ID=id-GGE_1449-5;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157889 157997 . + . ID=id-GGE_1449-6;Note=superfamily%3B label: RF-1 superfamily;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157910 158486 . + . ID=id-GGE_1449-7;Note=multi-dom%3B label: PrfB;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158297 158306 . + . ID=id-GGE_1449-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1449 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157802 158201 . - . ID=id-AFQR01000022.1:157802..158201;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157811 157832 . - . ID=id-AFQR01000022.1:157811..157832;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157823 158261 . - . ID=id-AFQR01000022.1:157823..158261;Dbxref=InterPro:IPR000352;Note=PatternScan:PS00745~rf_prok_i~peptide chain release factor class i/class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 157874 158369 . - . ID=id-AFQR01000022.1:157874..158369;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158018 158204 . - . ID=id-AFQR01000022.1:158018..158204;Note=Gene3D:3.30.160.200;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158081 158231 . - . ID=id-AFQR01000022.1:158081..158231;Note=superfamily%3B label: RF-1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158108 158204 . - . ID=id-AFQR01000022.1:158108..158204;Dbxref=InterPro:IPR000352,PFAM:PF00472;Note=rf-1~peptide chain release factor class i/class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 158736 160244 . + . ID=gene-GGE_1450;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank CDS 158736 160244 . + 0 ID=cds-EGT81264.1;Parent=gene-GGE_1450;Dbxref=GeneID:229559859,InterPro:IPR002313,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018149,InterPro:IPR018150,PFAM:PF00152,PFAM:PF01336,TIGRFAM:TIGR00499,NCBI_GP:EGT81264.1;Name=EGT81264.1;Ontology_term=GO:0006430,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004824,GO:0003676,GO:0000166;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,lysine-tRNA ligase activity|0004824||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=lysyl-tRNA aminoacylation|0006430||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1450;product=Lysyl-tRNA synthetase;protein_id=EGT81264.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158742 160233 . + . ID=id-GGE_1450;Dbxref=InterPro:IPR018150;Note=HMMPanther:PTHR22594:SF4~lysyl-trna synthetase~HMMPanther:PTHR22594~family not named~aminoacyl-trna synthetase%2C class ii (d/k/n)-like;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158760 159165 . + . ID=id-GGE_1450-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158766 160215 . + . ID=id-GGE_1450-3;Dbxref=InterPro:IPR002313,TIGRFAM:TIGR00499;Note=multi-dom~lyss_bact: lysyl-trna synthetase~lysyl-trna synthetase%2C class ii%3B label: lysS;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158778 159144 . + . ID=id-GGE_1450-4;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158787 160194 . + . ID=id-GGE_1450-5;Dbxref=InterPro:IPR002313;Note=HAMAP:MF_00252~lys_trna_synth_class2~lysyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158925 159060 . + . ID=id-GGE_1450-6;Note=specific~superfamily%3B label: LysRS_N;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158928 158973 . + . ID=id-GGE_1450-7;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 159186 159783 . + . ID=id-GGE_1450-8;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 159210 159768 . + . ID=id-GGE_1450-9;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 159210 159765 . + . ID=id-GGE_1450-10;Dbxref=InterPro:IPR004364,PFAM:PF00152;Note=trna-synt_2~aminoacyl-trna synthetase%2C class ii (d/k/n);gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 159255 159723 . + . ID=id-GGE_1450-11;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 159276 159690 . + . ID=id-GGE_1450-12;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=lysS;locus_tag=GGE_1450 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158769 159321 . - . ID=id-AFQR01000022.1:158769..159321;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158778 159456 . - . ID=id-AFQR01000022.1:158778..159456;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158787 159888 . - . ID=id-AFQR01000022.1:158787..159888;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158787 159369 . - . ID=id-AFQR01000022.1:158787..159369;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158790 159510 . - . ID=id-AFQR01000022.1:158790..159510;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 158802 160020 . - . ID=id-AFQR01000022.1:158802..160020;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 160331 161266 . - . ID=gene-GGE_1451;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank CDS 160331 161266 . - 0 ID=cds-EGT81265.1;Parent=gene-GGE_1451;Dbxref=GeneID:167008938,InterPro:IPR001236,InterPro:IPR001252,InterPro:IPR001557,InterPro:IPR010097,InterPro:IPR015955,InterPro:IPR016040,InterPro:IPR022383,PFAM:PF00056,PFAM:PF02866,PIR:PIRSF000102,TIGRFAM:TIGR01772,NCBI_GP:EGT81265.1;Name=EGT81265.1;Ontology_term=GO:0005975,GO:0044262,GO:0006108,GO:0008152,GO:0055114,GO:0030060,GO:0005488,GO:0003824,GO:0016615,GO:0016616,GO:0016491;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||,binding|0005488||,catalytic activity|0003824||,malate dehydrogenase activity|0016615||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||,oxidoreductase activity|0016491||;go_process=carbohydrate metabolic process|0005975||,cellular carbohydrate metabolic process|0044262||,malate metabolic process|0006108||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1451;product=Malate dehydrogenase;protein_id=EGT81265.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160331 161264 . - . ID=id-GGE_1451;Dbxref=InterPro:IPR001557,PIR:PIRSF000102;Note=multi-dom~l-lactate/malate dehydrogenase~l-lactate/malate dehydrogenase%3B label: PRK05086;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160331 161261 . - . ID=id-GGE_1451-2;Note=HAMAP:MF_01516~malate_dehydrog_1~HMMPanther:PTHR11540:SF26~malate dehydrogenase~HMMPanther:PTHR11540~family not named;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160331 160769 . - . ID=id-GGE_1451-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160331 160766 . - . ID=id-GGE_1451-4;Dbxref=InterPro:IPR001236,PFAM:PF00056;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains~ldh_1_n~lactate/malate dehydrogenase;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160337 161261 . - . ID=id-GGE_1451-5;Dbxref=InterPro:IPR010097,TIGRFAM:TIGR01772;Note=mdh_euk_gproteo: malate dehydrogenase~malate dehydrogenase%2C type 1;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160349 160397 . - . ID=id-GGE_1451-6;Note=seg;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160415 161177 . - . ID=id-GGE_1451-7;Note=specific~superfamily%3B label: LDH_MDH_like superfamily;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160769 160829 . - . ID=id-GGE_1451-8;Dbxref=InterPro:IPR015955;Note=superfamily:SSF56327~ldh c-terminal domain-like~lactate dehydrogenase/glycoside hydrolase%2C family 4;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160772 160823 . - . ID=id-GGE_1451-9;Dbxref=InterPro:IPR015955;Note=Gene3D:3.90.110.10~lactate dehydrogenase/glycoside hydrolase%2C family 4;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160772 160820 . - . ID=id-GGE_1451-10;Dbxref=InterPro:IPR022383,PFAM:PF02866;Note=ldh_1_c~lactate/malate dehydrogenase;gbkey=misc_feature;gene=mdh;locus_tag=GGE_1451 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 160370 160769 . + . ID=id-AFQR01000022.1:160370..160769;Dbxref=InterPro:IPR001252;Note=PatternScan:PS00068~mdh~malate dehydrogenase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 161474 161929 . + . ID=gene-GGE_1452;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank CDS 161474 161929 . + 0 ID=cds-EGT81266.1;Parent=gene-GGE_1452;Dbxref=GeneID:166217504,InterPro:IPR001669,InterPro:IPR011991,InterPro:IPR020899,InterPro:IPR020900,PFAM:PF01316,PFAM:PF02863,TIGRFAM:TIGR01529,NCBI_GP:EGT81266.1;Name=EGT81266.1;Ontology_term=GO:0006525,GO:0006355,GO:0003700;gbkey=CDS;gene=argR;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=arginine metabolic process|0006525||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1452;product=Arginine repressor;protein_id=EGT81266.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161474 161924 . + . ID=id-GGE_1452;Dbxref=InterPro:IPR001669;Note=HAMAP:MF_00173~arg_repressor~arginine repressor;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161480 161924 . + . ID=id-GGE_1452-2;Note=multi-dom%3B label: PRK05066;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161480 161690 . + . ID=id-GGE_1452-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161480 161687 . + . ID=id-GGE_1452-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161483 161909 . + . ID=id-GGE_1452-5;Dbxref=InterPro:IPR001669,TIGRFAM:TIGR01529;Note=argr_whole: arginine repressor~arginine repressor;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161489 161669 . + . ID=id-GGE_1452-6;Dbxref=InterPro:IPR020900,PFAM:PF01316;Note=arg_repressor~arginine repressor%2C dna-binding domain;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161498 161663 . + . ID=id-GGE_1452-7;Note=superfamily%3B label: Arg_repressor superfamily;gbkey=misc_feature;gene=argR;locus_tag=GGE_1452 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161516 161729 . - . ID=id-AFQR01000022.1:161516..161729;Dbxref=InterPro:IPR001669;Note=FPrintScan:PR01467~argrepressor~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161516 161534 . - . ID=id-AFQR01000022.1:161516..161534;Dbxref=InterPro:IPR001669;Note=FPrintScan:PR01467~argrepressor~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161522 161822 . - . ID=id-AFQR01000022.1:161522..161822;Dbxref=InterPro:IPR001669;Note=FPrintScan:PR01467~argrepressor~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161522 161585 . - . ID=id-AFQR01000022.1:161522..161585;Dbxref=InterPro:IPR001669;Note=FPrintScan:PR01467~argrepressor~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161669 161726 . - . ID=id-AFQR01000022.1:161669..161726;Dbxref=InterPro:IPR020899;Note=BlastProDom:PD007402~argr_erwct_q6d9d2~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161681 161705 . - . ID=id-AFQR01000022.1:161681..161705;Dbxref=InterPro:IPR020899,PFAM:PF02863;Note=arg_repressor_c~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161687 161705 . - . ID=id-AFQR01000022.1:161687..161705;Dbxref=InterPro:IPR020899;Note=superfamily:SSF55252~c-terminal domain of arginine repressor~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161687 161702 . - . ID=id-AFQR01000022.1:161687..161702;Note=superfamily%3B label: Arg_repressor_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161696 161699 . - . ID=id-AFQR01000022.1:161696..161699;Dbxref=InterPro:IPR020899;Note=Gene3D:3.30.1360.40~arginine repressor;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 161929 162819 . + . ID=gene-GGE_1453;Name=GGE_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank CDS 161929 162819 . + 0 ID=cds-EGT81267.1;Parent=gene-GGE_1453;Dbxref=InterPro:IPR001509,InterPro:IPR010099,InterPro:IPR013549,InterPro:IPR016040,PFAM:PF01370,PFAM:PF08338,TIGRFAM:TIGR01777,NCBI_GP:EGT81267.1;Name=EGT81267.1;Note=HI_1208;Ontology_term=GO:0044237,GO:0008152,GO:0005488,GO:0003824,GO:0050662;gbkey=CDS;go_function=binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||;go_process=cellular metabolic process|0044237||,metabolic process|0008152||;locus_tag=GGE_1453;product=Epimerase family protein;protein_id=EGT81267.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161929 162817 . + . ID=id-GGE_1453;Dbxref=InterPro:IPR010099;Note=HMMPanther:PTHR11092~family not named~sugar nucleotide epimerase yfch%2C putative;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161929 162643 . + . ID=id-GGE_1453-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161935 162808 . + . ID=id-GGE_1453-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161938 162790 . + . ID=id-GGE_1453-4;Dbxref=InterPro:IPR010099,TIGRFAM:TIGR01777;Note=yfch: conserved hypothetical protein tigr017~sugar nucleotide epimerase yfch%2C putative;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161938 162571 . + . ID=id-GGE_1453-5;Dbxref=InterPro:IPR001509,PFAM:PF01370;Note=epimerase~nad-dependent epimerase/dehydratase;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161938 161962 . + . ID=id-GGE_1453-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161971 162769 . + . ID=id-GGE_1453-7;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 161971 162757 . + . ID=id-GGE_1453-8;Note=multi-dom%3B label: yfcH;gbkey=misc_feature;locus_tag=GGE_1453 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162072 162081 . - . ID=id-AFQR01000022.1:162072..162081;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162073 162667 . - . ID=id-AFQR01000022.1:162073..162667;Dbxref=InterPro:IPR013549,PFAM:PF08338;Note=duf1731~domain of unknown function duf1731;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162619 162628 . - . ID=id-AFQR01000022.1:162619..162628;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162826 162835 . - . ID=id-AFQR01000022.1:162826..162835;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 162885 164402 . - . ID=gene-GGE_1454;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank CDS 162885 164402 . - 0 ID=cds-EGT81268.1;Parent=gene-GGE_1454;Dbxref=GeneID:1172750,InterPro:IPR000583,InterPro:IPR000836,InterPro:IPR005854,InterPro:IPR017932,PFAM:PF00156,PFAM:PF00310,PIR:PIRSF000485,TIGRFAM:TIGR01134,NCBI_GP:EGT81268.1;Name=EGT81268.1;Ontology_term=GO:0008152,GO:0009116,GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||;go_process=metabolic process|0008152||,nucleoside metabolic process|0009116||,purine base biosynthetic process|0009113||;locus_tag=GGE_1454;product=Amidophosphoribosyltransferase;protein_id=EGT81268.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162885 164400 . - . ID=id-GGE_1454;Note=multi-dom%3B label: PRK09246;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162885 164367 . - . ID=id-GGE_1454-2;Dbxref=InterPro:IPR005854;Note=HMMPanther:PTHR11907~family not named~amidophosphoribosyl transferase;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162885 164334 . - . ID=id-GGE_1454-3;Dbxref=InterPro:IPR005854,PIR:PIRSF000485;Note=amidophosphoribosyltransferase~amidophosphoribosyl transferase;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 164286 . - . ID=id-GGE_1454-4;Dbxref=InterPro:IPR005854,TIGRFAM:TIGR01134;Note=purf: amidophosphoribosyltransferase~amidophosphoribosyl transferase;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 163683 . - . ID=id-GGE_1454-5;Note=specific~superfamily%3B label: Gn_AT_II superfamily;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 163659 . - . ID=id-GGE_1454-6;Note=Gene3D:3.60.20.10;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 163656 . - . ID=id-GGE_1454-7;Note=superfamily:SSF56235~n-terminal nucleophile aminohydrolase (ntn hydrolase);gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 163587 . - . ID=id-GGE_1454-8;Dbxref=InterPro:IPR017932;Note=ProfileScan:PS51278~gatase_type_2~glutamine amidotransferase%2C type ii;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162891 163023 . - . ID=id-GGE_1454-9;Dbxref=InterPro:IPR000583,PFAM:PF00310;Note=gatase_2~glutamine amidotransferase%2C class-ii;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163053 163347 . - . ID=id-GGE_1454-10;Dbxref=InterPro:IPR000583,PFAM:PF00310;Note=gatase_2~glutamine amidotransferase%2C class-ii;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163659 163668 . - . ID=id-GGE_1454-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=purF;locus_tag=GGE_1454 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 162951 164340 . + . ID=id-AFQR01000022.1:162951..164340;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163233 163728 . + . ID=id-AFQR01000022.1:163233..163728;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163233 163725 . + . ID=id-AFQR01000022.1:163233..163725;Note=superfamily%3B label: Pribosyltran superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163383 163725 . + . ID=id-AFQR01000022.1:163383..163725;Note=Gene3D:3.40.50.2020;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 163596 163638 . + . ID=id-AFQR01000022.1:163596..163638;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 164413 164904 . - . ID=gene-GGE_1455;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=GGE_1455 GCA_000222085.2|AFQR01000022.1 Genbank CDS 164413 164904 . - 0 ID=cds-EGT81269.1;Parent=gene-GGE_1455;Dbxref=GeneID:1169143,InterPro:IPR003825,PFAM:PF02674,NCBI_GP:EGT81269.1;Name=EGT81269.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;gene=cvpA;go_component=membrane|0016020||;go_process=toxin biosynthetic process|0009403||;locus_tag=GGE_1455;product=Colicin V production protein;protein_id=EGT81269.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164419 164881 . - . ID=id-GGE_1455;Note=superfamily%3B label: Colicin_V superfamily;gbkey=misc_feature;gene=cvpA;locus_tag=GGE_1455 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164419 164827 . - . ID=id-GGE_1455-2;Dbxref=InterPro:IPR003825,PFAM:PF02674;Note=colicin_v~colicin v production%2C cvpa;gbkey=misc_feature;gene=cvpA;locus_tag=GGE_1455 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164425 164470 . - . ID=id-GGE_1455-3;Note=transmembrane_regions;gbkey=misc_feature;gene=cvpA;locus_tag=GGE_1455 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164482 164701 . + . ID=id-AFQR01000022.1:164482..164701;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164482 164596 . + . ID=id-AFQR01000022.1:164482..164596;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164482 164500 . + . ID=id-AFQR01000022.1:164482..164500;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 164487 164496 . + . ID=id-AFQR01000022.1:164487..164496;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 164991 165455 . - . ID=gene-GGE_1456;Name=GGE_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1456 GCA_000222085.2|AFQR01000022.1 Genbank CDS 164991 165455 . - 0 ID=cds-EGT81270.1;Parent=gene-GGE_1456;Dbxref=InterPro:IPR007334,PFAM:PF04217,NCBI_GP:EGT81270.1;Name=EGT81270.1;Note=CGSHiEE_06015;gbkey=CDS;locus_tag=GGE_1456;product=UPF0208 membrane protein;protein_id=EGT81270.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165015 165432 . - . ID=id-GGE_1456;Dbxref=InterPro:IPR007334;Note=superfamily~HAMAP:MF_01101~upf0208~uncharacterised protein family upf0208%3B label: DUF412 superfamily;gbkey=misc_feature;locus_tag=GGE_1456 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165021 165423 . - . ID=id-GGE_1456-2;Dbxref=InterPro:IPR007334,PFAM:PF04217;Note=duf412~uncharacterised protein family upf0208;gbkey=misc_feature;locus_tag=GGE_1456 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165135 165144 . - . ID=id-GGE_1456-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1456 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165051 165126 . + . ID=id-AFQR01000022.1:165051..165126;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165060 165198 . + . ID=id-AFQR01000022.1:165060..165198;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165214 165223 . + . ID=id-AFQR01000022.1:165214..165223;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 165655 166860 . + . ID=gene-GGE_1457;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank CDS 165655 166860 . + 0 ID=cds-EGT81271.1;Parent=gene-GGE_1457;Dbxref=GeneID:81335821,InterPro:IPR000890,InterPro:IPR004372,PFAM:PF00871,PIR:PIRSF000722,TIGRFAM:TIGR00016,NCBI_GP:EGT81271.1;Name=EGT81271.1;Ontology_term=GO:0008152,GO:0006082,GO:0016310,GO:0005622,GO:0016301,GO:0016774;gbkey=CDS;gene=ackA;go_component=intracellular|0005622||;go_function=kinase activity|0016301||,phosphotransferase activity carboxyl group as acceptor|0016774||;go_process=metabolic process|0008152||,organic acid metabolic process|0006082||,phosphorylation|0016310||;locus_tag=GGE_1457;product=Acetate kinase;protein_id=EGT81271.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165655 166858 . + . ID=id-GGE_1457;Dbxref=InterPro:IPR004372,TIGRFAM:TIGR00016;Note=acka: acetate kinase~acetate kinase~HAMAP:MF_00020~acetate_kinase~acetate kinase;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165655 166855 . + . ID=id-GGE_1457-2;Dbxref=InterPro:IPR004372,PIR:PIRSF000722;Note=acetate/propionate kinase~acetate kinase;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165655 166852 . + . ID=id-GGE_1457-3;Dbxref=InterPro:IPR000890;Note=HMMPanther:PTHR21060:SF14~acetate kinase~HMMPanther:PTHR21060~family not named~acetate/butyrate kinase;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165661 166240 . + . ID=id-GGE_1457-4;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165664 166849 . + . ID=id-GGE_1457-5;Note=superfamily%3B label: Acetate_kinase superfamily;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165670 166825 . + . ID=id-GGE_1457-6;Dbxref=InterPro:IPR000890,PFAM:PF00871;Note=acetate_kinase~acetate/butyrate kinase;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165670 165691 . + . ID=id-GGE_1457-7;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase~PatternScan:PS01075~acetate_kinase_1~acetate/butyrate kinase;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166123 166387 . + . ID=id-GGE_1457-8;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=ackA;locus_tag=GGE_1457 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165691 166282 . - . ID=id-AFQR01000022.1:165691..166282;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165694 166798 . - . ID=id-AFQR01000022.1:165694..166798;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165697 166558 . - . ID=id-AFQR01000022.1:165697..166558;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165697 166174 . - . ID=id-AFQR01000022.1:165697..166174;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165706 166630 . - . ID=id-AFQR01000022.1:165706..166630;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165709 166264 . - . ID=id-AFQR01000022.1:165709..166264;Dbxref=InterPro:IPR000890;Note=PatternScan:PS01076~acetate_kinase_2~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 165721 166264 . - . ID=id-AFQR01000022.1:165721..166264;Dbxref=InterPro:IPR000890;Note=FPrintScan:PR00471~acetateknase~acetate/butyrate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 166928 169063 . + . ID=gene-GGE_1458;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank CDS 166928 169063 . + 0 ID=cds-EGT81272.1;Parent=gene-GGE_1458;Dbxref=GeneID:1172706,InterPro:IPR002505,InterPro:IPR004614,InterPro:IPR010766,InterPro:IPR016475,PFAM:PF01515,PFAM:PF07085,PIR:PIRSF006107,TIGRFAM:TIGR00651,NCBI_GP:EGT81272.1;Name=EGT81272.1;Ontology_term=GO:0008152,GO:0016407,GO:0008415,GO:0008959;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||,acyltransferase activity|0008415||,phosphate acetyltransferase activity|0008959||;go_process=metabolic process|0008152||;locus_tag=GGE_1458;product=Phosphate acetyltransferase;protein_id=EGT81272.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166928 169061 . + . ID=id-GGE_1458;Dbxref=InterPro:IPR016475,PIR:PIRSF006107;Note=phosphate acetyltransferase%2C proteobacteria type~phosphate acetyltransferase%2C bacteria;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166928 169058 . + . ID=id-GGE_1458-2;Note=multi-dom%3B label: PRK05632;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166928 167651 . + . ID=id-GGE_1458-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166928 167468 . + . ID=id-GGE_1458-4;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166943 166997 . + . ID=id-GGE_1458-5;Note=transmembrane_regions;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166952 167432 . + . ID=id-GGE_1458-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167513 168479 . + . ID=id-GGE_1458-7;Note=HMMPanther:PTHR23406:SF3~phosphate acetyltransferase~HMMPanther:PTHR23406~family not named;gbkey=misc_feature;gene=pta;locus_tag=GGE_1458 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 166952 167825 . - . ID=id-AFQR01000022.1:166952..167825;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167264 167627 . - . ID=id-AFQR01000022.1:167264..167627;Dbxref=InterPro:IPR010766,PFAM:PF07085;Note=drtgg~drtgg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167267 167627 . - . ID=id-AFQR01000022.1:167267..167627;Note=superfamily%3B label: DRTGG superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167351 167600 . - . ID=id-AFQR01000022.1:167351..167600;Note=Gene3D:3.40.1390.20;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167831 168146 . - . ID=id-AFQR01000022.1:167831..168146;Dbxref=InterPro:IPR004614,TIGRFAM:TIGR00651;Note=superfamily~pta: phosphate acetyltransferase~phosphate acetyltransferase%3B label: PTA_PTB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167867 168110 . - . ID=id-AFQR01000022.1:167867..168110;Dbxref=InterPro:IPR002505,PFAM:PF01515;Note=pta_ptb~phosphate acetyl/butaryl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 167888 168098 . - . ID=id-AFQR01000022.1:167888..168098;Note=superfamily:SSF53659~isocitrate/isopropylmalate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169088 169097 . - . ID=id-AFQR01000022.1:169088..169097;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169111 169120 . + . ID=id-AFQR01000022.1:169111..169120;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 169141 169644 . - . ID=gene-GGE_1459;Name=GGE_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1459 GCA_000222085.2|AFQR01000022.1 Genbank CDS 169141 169644 . - 0 ID=cds-EGT81273.1;Parent=gene-GGE_1459;Dbxref=GeneID:1175577,InterPro:IPR002625,InterPro:IPR022990,PFAM:PF01713,NCBI_GP:EGT81273.1;Name=EGT81273.1;Note=HI_1202;gbkey=CDS;locus_tag=GGE_1459;product=UPF0115 protein;protein_id=EGT81273.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169141 169642 . - . ID=id-GGE_1459;Dbxref=InterPro:IPR022990;Note=superfamily~multi-dom~HAMAP:MF_01042~upf0115~uncharacterised protein family upf0115%3B label: COG2840;gbkey=misc_feature;locus_tag=GGE_1459 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169162 169456 . + . ID=id-AFQR01000022.1:169162..169456;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169366 169414 . + . ID=id-AFQR01000022.1:169366..169414;Dbxref=InterPro:IPR002625,PFAM:PF01713;Note=smr~smr protein/muts2 c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169369 169414 . + . ID=id-AFQR01000022.1:169369..169414;Dbxref=InterPro:IPR002625;Note=ProfileScan:PS50828~smr~smr protein/muts2 c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 169774 170718 . + . ID=gene-GGE_1460;Name=GGE_1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank CDS 169774 170718 . + 0 ID=cds-EGT81274.1;Parent=gene-GGE_1460;Dbxref=GeneID:1175938,InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR007848,InterPro:IPR017127,PFAM:PF05175,PIR:PIRSF037167,TIGRFAM:TIGR00536,TIGRFAM:TIGR03533,NCBI_GP:EGT81274.1;Name=EGT81274.1;Note=HI_1201;Ontology_term=GO:0006306,GO:0032259,GO:0006479,GO:0005622,GO:0008168,GO:0003676,GO:0008276,GO:0009007;gbkey=CDS;go_component=intracellular|0005622||;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,protein methyltransferase activity|0008276||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||,protein methylation|0006479||;locus_tag=GGE_1460;product=putative methyltransferase small;protein_id=EGT81274.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169774 170716 . + . ID=id-GGE_1460;Dbxref=InterPro:IPR017127,PIR:PIRSF037167;Note=predicted s-adenosyl-l-methionine dependent n4/n6-methyltransferase%2C yfcb type~ribosomal protein l3-specific%2C glutamine-n5-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169816 170581 . + . ID=id-GGE_1460-2;Note=HMMPanther:PTHR18895:SF7~hemk methyltransferase family member~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169840 170623 . + . ID=id-GGE_1460-3;Dbxref=InterPro:IPR017127,TIGRFAM:TIGR03533;Note=l3_gln_methyl: protein-(glutamine-n5) m~ribosomal protein l3-specific%2C glutamine-n5-methyltransferase;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169843 170650 . + . ID=id-GGE_1460-4;Dbxref=InterPro:IPR004556,TIGRFAM:TIGR00536;Note=hemk_fam: methyltransferase%2C hemk famil~modification methylase hemk;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169843 170644 . + . ID=id-GGE_1460-5;Note=multi-dom%3B label: hemK_fam;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169846 170620 . + . ID=id-GGE_1460-6;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 170095 170359 . + . ID=id-GGE_1460-7;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1460 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 169795 170413 . - . ID=id-AFQR01000022.1:169795..170413;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 170155 170209 . - . ID=id-AFQR01000022.1:170155..170209;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 170161 170197 . - . ID=id-AFQR01000022.1:170161..170197;Dbxref=InterPro:IPR007848,PFAM:PF05175;Note=mts~methyltransferase small;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 171025 171885 . + . ID=gene-GGE_1461;Name=GGE_1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1461 GCA_000222085.2|AFQR01000022.1 Genbank CDS 171025 171885 . + 0 ID=cds-EGT81275.1;Parent=gene-GGE_1461;Dbxref=GeneID:325578260,InterPro:IPR016196,NCBI_GP:EGT81275.1;Name=EGT81275.1;Note=ZP_08148395;gbkey=CDS;locus_tag=GGE_1461;product=MFS family major facilitator transporter;protein_id=EGT81275.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171025 171877 . + . ID=id-GGE_1461;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;locus_tag=GGE_1461 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171055 171094 . + . ID=id-GGE_1461-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1461 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171079 171544 . - . ID=id-AFQR01000022.1:171079..171544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171085 171292 . - . ID=id-AFQR01000022.1:171085..171292;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171085 171220 . - . ID=id-AFQR01000022.1:171085..171220;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171094 171814 . - . ID=id-AFQR01000022.1:171094..171814;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171094 171709 . - . ID=id-AFQR01000022.1:171094..171709;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171094 171631 . - . ID=id-AFQR01000022.1:171094..171631;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 171094 171433 . - . ID=id-AFQR01000022.1:171094..171433;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172031 172058 . - . ID=id-AFQR01000022.1:172031..172058;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172043 172067 . + . ID=id-AFQR01000022.1:172043..172067;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172067 172130 . - . ID=id-AFQR01000022.1:172067..172130;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172279 172327 . + . ID=id-AFQR01000022.1:172279..172327;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 172446 173417 . - . ID=gene-GGE_1462;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank CDS 172446 173417 . - 0 ID=cds-EGT81276.1;Parent=gene-GGE_1462;Dbxref=GeneID:1169181,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT81276.1;Name=EGT81276.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1462;product=HTH-type transcriptional regulator CysB;protein_id=EGT81276.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172446 173415 . - . ID=id-GGE_1462;Note=multi-dom%3B label: cysB;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172446 172788 . - . ID=id-GGE_1462-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172446 172701 . - . ID=id-GGE_1462-3;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172446 172626 . - . ID=id-GGE_1462-4;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172455 172632 . - . ID=id-GGE_1462-5;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172710 173154 . - . ID=id-GGE_1462-6;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172713 173055 . - . ID=id-GGE_1462-7;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172719 172722 . - . ID=id-GGE_1462-8;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172731 173034 . - . ID=id-GGE_1462-9;Note=specific~superfamily%3B label: PBP2_CysB_like;gbkey=misc_feature;gene=cysB;locus_tag=GGE_1462 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172479 172536 . + . ID=id-AFQR01000022.1:172479..172536;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172482 172566 . + . ID=id-AFQR01000022.1:172482..172566;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172482 172503 . + . ID=id-AFQR01000022.1:172482..172503;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 172677 172995 . + . ID=id-AFQR01000022.1:172677..172995;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 173429 174502 . - . ID=gene-GGE_1463;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank CDS 173429 174502 . - 0 ID=cds-EGT81277.1;Parent=gene-GGE_1463;Dbxref=GeneID:1175679,InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,PFAM:PF00849,PFAM:PF01479,TIGRFAM:TIGR00093,NCBI_GP:EGT81277.1;Name=EGT81277.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0016866,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||,intramolecular transferase activity|0016866||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_1463;product=Ribosomal large subunit pseudouridine synthase B;protein_id=EGT81277.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173591 173816 . - . ID=id-GGE_1463;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173624 174299 . - . ID=id-GGE_1463-2;Note=HMMPanther:PTHR21600:SF2~ribosomal large subunit pseudouridine synthase b~HMMPanther:PTHR21600~family not named;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173651 174260 . - . ID=id-GGE_1463-3;Note=multi-dom%3B label: PRK10700;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173843 173966 . - . ID=id-GGE_1463-4;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173852 173927 . - . ID=id-GGE_1463-5;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173867 173915 . - . ID=id-GGE_1463-6;Dbxref=InterPro:IPR000748,TIGRFAM:TIGR00093;Note=tigr00093: pseudouridine synthase~pseudouridine synthase%2C rsua/rlub/e/f;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174356 174365 . - . ID=id-GGE_1463-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rluB;locus_tag=GGE_1463 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173474 173969 . + . ID=id-AFQR01000022.1:173474..173969;Dbxref=InterPro:IPR018496;Note=PatternScan:PS01149~psi_rsu~pseudouridine synthase%2C rsua and rlub/e/f%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173474 173519 . + . ID=id-AFQR01000022.1:173474..173519;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173549 173660 . + . ID=id-AFQR01000022.1:173549..173660;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173573 173663 . + . ID=id-AFQR01000022.1:173573..173663;Note=superfamily%3B label: S4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173648 173657 . + . ID=id-AFQR01000022.1:173648..173657;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 173816 173855 . + . ID=id-AFQR01000022.1:173816..173855;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174460 174469 . + . ID=id-AFQR01000022.1:174460..174469;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 174550 175173 . - . ID=gene-GGE_1464;Name=GGE_1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank CDS 174550 175173 . - 0 ID=cds-EGT81278.1;Parent=gene-GGE_1464;Dbxref=GeneID:1175684,InterPro:IPR004388,InterPro:IPR006070,InterPro:IPR017945,PFAM:PF01300,TIGRFAM:TIGR00057,NCBI_GP:EGT81278.1;Name=EGT81278.1;Note=HI_1198;gbkey=CDS;locus_tag=GGE_1464;product=Hypothetical protein;protein_id=EGT81278.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174550 175171 . - . ID=id-GGE_1464;Dbxref=InterPro:IPR017945;Note=superfamily~superfamily:SSF55821~yrdc/ribb~dhbp synthase ribb-like alpha/beta domain%3B label: Sua5_yciO_yrdC superfamily;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174550 175168 . - . ID=id-GGE_1464-2;Note=HMMPanther:PTHR17490~family not named;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174556 175156 . - . ID=id-GGE_1464-3;Dbxref=InterPro:IPR017945;Note=Gene3D:3.90.870.10~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174571 175153 . - . ID=id-GGE_1464-4;Dbxref=InterPro:IPR004388,TIGRFAM:TIGR00057;Note=tigr00057: sua5/ycio/yrdc/ywlc family prote~sua5/ycio/yrdc/ywlc;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174592 175114 . - . ID=id-GGE_1464-5;Dbxref=InterPro:IPR006070;Note=ProfileScan:PS51163~yrdc~sua5/ycio/yrdc;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 174619 175081 . - . ID=id-GGE_1464-6;Dbxref=InterPro:IPR006070,PFAM:PF01300;Note=sua5_ycio_yrdc~sua5/ycio/yrdc;gbkey=misc_feature;locus_tag=GGE_1464 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175284 175293 . + . ID=id-AFQR01000022.1:175284..175293;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 175308 176177 . - . ID=gene-GGE_1465;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank CDS 175308 176177 . - 0 ID=cds-EGT81279.1;Parent=gene-GGE_1465;Dbxref=GeneID:1174474,InterPro:IPR003781,InterPro:IPR005810,InterPro:IPR005811,InterPro:IPR016040,InterPro:IPR016102,InterPro:IPR017440,PFAM:PF00549,PFAM:PF02629,PIR:PIRSF001553,TIGRFAM:TIGR01019,NCBI_GP:EGT81279.1;Name=EGT81279.1;Ontology_term=GO:0008152,GO:0003878,GO:0005488,GO:0003824,GO:0004775;gbkey=CDS;gene=sucD;go_function=ATP citrate synthase activity|0003878||,binding|0005488||,catalytic activity|0003824||,succinate-CoA ligase (ADP-forming) activity|0004775||;go_process=metabolic process|0008152||;locus_tag=GGE_1465;product=Succinyl-CoA ligase ADP-forming subunit alpha;protein_id=EGT81279.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175308 176175 . - . ID=id-GGE_1465;Dbxref=InterPro:IPR005810,PIR:PIRSF001553;Note=multi-dom~succinyl-coa synthetase%2C alpha subunit~succinyl-coa ligase%2C alpha subunit~HMMPanther:PTHR11117~family not named%3B label: PRK05678;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175308 175674 . - . ID=id-GGE_1465-2;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175317 176166 . - . ID=id-GGE_1465-3;Dbxref=InterPro:IPR005810,TIGRFAM:TIGR01019;Note=succoaalpha: succinate-coa ligase%2C alpha~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175317 175671 . - . ID=id-GGE_1465-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175326 175590 . - . ID=id-GGE_1465-5;Dbxref=InterPro:IPR003781,PFAM:PF02629;Note=superfamily~coa_binding~coa-binding%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175677 175809 . - . ID=id-GGE_1465-6;Dbxref=InterPro:IPR016102;Note=superfamily:SSF52210~succinyl-coa synthetase domains~succinyl-coa synthetase-like;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175683 175797 . - . ID=id-GGE_1465-7;Dbxref=InterPro:IPR016102;Note=Gene3D:3.40.50.261~succinyl-coa synthetase-like;gbkey=misc_feature;gene=sucD;locus_tag=GGE_1465 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175347 175929 . + . ID=id-AFQR01000022.1:175347..175929;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175350 176016 . + . ID=id-AFQR01000022.1:175350..176016;Dbxref=InterPro:IPR017440;Note=PatternScan:PS00399~succinyl_coa_lig_2~atp-citrate lyase/succinyl-coa ligase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175350 175932 . + . ID=id-AFQR01000022.1:175350..175932;Dbxref=InterPro:IPR005810;Note=FPrintScan:PR01798~scoasynthase~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175362 176028 . + . ID=id-AFQR01000022.1:175362..176028;Dbxref=InterPro:IPR005810;Note=FPrintScan:PR01798~scoasynthase~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175362 175554 . + . ID=id-AFQR01000022.1:175362..175554;Dbxref=InterPro:IPR005810;Note=FPrintScan:PR01798~scoasynthase~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175365 175839 . + . ID=id-AFQR01000022.1:175365..175839;Dbxref=InterPro:IPR005810;Note=FPrintScan:PR01798~scoasynthase~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175398 175764 . + . ID=id-AFQR01000022.1:175398..175764;Dbxref=InterPro:IPR005810;Note=PatternScan:PS01216~succinyl_coa_lig_1~succinyl-coa ligase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 175671 175761 . + . ID=id-AFQR01000022.1:175671..175761;Dbxref=InterPro:IPR005811,PFAM:PF00549;Note=superfamily~ligase_coa~atp-citrate lyase/succinyl-coa ligase%3B label: Ligase_CoA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 176177 177346 . - . ID=gene-GGE_1466;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank CDS 176177 177346 . - 0 ID=cds-EGT81280.1;Parent=gene-GGE_1466;Dbxref=GeneID:189030245,InterPro:IPR005809,InterPro:IPR005811,InterPro:IPR013650,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016102,InterPro:IPR017866,PFAM:PF00549,PFAM:PF08442,TIGRFAM:TIGR01016,NCBI_GP:EGT81280.1;Name=EGT81280.1;Ontology_term=GO:0008152,GO:0005524,GO:0003824,GO:0016874;gbkey=CDS;gene=sucC;go_function=ATP binding|0005524||,catalytic activity|0003824||,ligase activity|0016874||;go_process=metabolic process|0008152||;locus_tag=GGE_1466;product=Succinyl-CoA ligase ADP-forming subunit beta;protein_id=EGT81280.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176177 177341 . - . ID=id-GGE_1466;Note=multi-dom%3B label: sucC;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176177 177335 . - . ID=id-GGE_1466-2;Dbxref=InterPro:IPR005809,TIGRFAM:TIGR01016;Note=succoabeta: succinate-coa ligase%2C beta sub~succinyl-coa synthetase%2C beta subunit~HAMAP:MF_00558~succ_coa_beta~succinyl-coa synthetase%2C beta subunit~HMMPanther:PTHR11815~family not named~succinyl-coa synthetase%2C beta subunit;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176177 176891 . - . ID=id-GGE_1466-3;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176183 176783 . - . ID=id-GGE_1466-4;Note=superfamily%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176183 176780 . - . ID=id-GGE_1466-5;Dbxref=InterPro:IPR013650,PFAM:PF08442;Note=atp-grasp_2~atp-grasp fold%2C succinyl-coa synthetase-type;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176243 176399 . - . ID=id-GGE_1466-6;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176465 176609 . - . ID=id-GGE_1466-7;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature;gene=sucC;locus_tag=GGE_1466 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176213 177185 . + . ID=id-AFQR01000022.1:176213..177185;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176255 176948 . + . ID=id-AFQR01000022.1:176255..176948;Dbxref=InterPro:IPR017866;Note=PatternScan:PS01217~succinyl_coa_lig_3~succinyl-coa synthetase%2C beta subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176537 176963 . + . ID=id-AFQR01000022.1:176537..176963;Dbxref=InterPro:IPR005811,PFAM:PF00549;Note=ligase_coa~atp-citrate lyase/succinyl-coa ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176540 176963 . + . ID=id-AFQR01000022.1:176540..176963;Note=superfamily%3B label: Ligase_CoA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176609 176900 . + . ID=id-AFQR01000022.1:176609..176900;Dbxref=InterPro:IPR016102;Note=Gene3D:3.40.50.261~succinyl-coa synthetase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 176621 176894 . + . ID=id-AFQR01000022.1:176621..176894;Dbxref=InterPro:IPR016102;Note=superfamily:SSF52210~succinyl-coa synthetase domains~succinyl-coa synthetase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 177382 178473 . - . ID=gene-GGE_1467;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=GGE_1467 GCA_000222085.2|AFQR01000022.1 Genbank CDS 177382 178473 . - 0 ID=cds-EGT81281.1;Parent=gene-GGE_1467;Dbxref=GeneID:1176087,InterPro:IPR002877,InterPro:IPR011224,PFAM:PF01728,PIR:PIRSF028774,NCBI_GP:EGT81281.1;Name=EGT81281.1;Ontology_term=GO:0032259,GO:0008168,GO:0003676;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||;go_process=methylation|0032259||;locus_tag=GGE_1467;product=Ribosomal RNA large subunit methyltransferase M;protein_id=EGT81281.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177382 178471 . - . ID=id-GGE_1467;Dbxref=InterPro:IPR011224,PIR:PIRSF028774;Note=multi-dom~uncharacterised conserved protein%2C ucp028774 type~ribosomal rna large subunit methyltransferase m%3B label: PRK11760;gbkey=misc_feature;gene=rlmM;locus_tag=GGE_1467 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177382 178468 . - . ID=id-GGE_1467-2;Dbxref=InterPro:IPR011224;Note=HAMAP:MF_01551~23srrna_methyltr_m~ribosomal rna large subunit methyltransferase m;gbkey=misc_feature;gene=rlmM;locus_tag=GGE_1467 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178020 178029 . - . ID=id-GGE_1467-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rlmM;locus_tag=GGE_1467 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177664 177958 . + . ID=id-AFQR01000022.1:177664..177958;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177667 177958 . + . ID=id-AFQR01000022.1:177667..177958;Dbxref=InterPro:IPR002877,PFAM:PF01728;Note=ftsj~ribosomal rna methyltransferase rrmj/ftsj;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177676 177949 . + . ID=id-AFQR01000022.1:177676..177949;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 177814 177922 . + . ID=id-AFQR01000022.1:177814..177922;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 178466 179359 . - . ID=gene-GGE_1468;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank CDS 178466 179359 . - 0 ID=cds-EGT81282.1;Parent=gene-GGE_1468;Dbxref=GeneID:1169886,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT81282.1;Name=EGT81282.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1468;product=Glycine cleavage system transcriptional activator;protein_id=EGT81282.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178466 179354 . - . ID=id-GGE_1468;Note=multi-dom%3B label: PRK11139;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178484 178796 . - . ID=id-GGE_1468-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178484 178640 . - . ID=id-GGE_1468-3;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178490 178706 . - . ID=id-GGE_1468-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178490 178646 . - . ID=id-GGE_1468-5;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178490 178643 . - . ID=id-GGE_1468-6;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=hth_1~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178718 179093 . - . ID=id-GGE_1468-7;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178751 179051 . - . ID=id-GGE_1468-8;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178751 179045 . - . ID=id-GGE_1468-9;Note=specific~superfamily%3B label: PBP2_GcdR_TrpI_HvrB_AmpR_like;gbkey=misc_feature;gene=gcvA;locus_tag=GGE_1468 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178499 178568 . + . ID=id-AFQR01000022.1:178499..178568;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178502 178598 . + . ID=id-AFQR01000022.1:178502..178598;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178502 178535 . + . ID=id-AFQR01000022.1:178502..178535;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178532 178685 . + . ID=id-AFQR01000022.1:178532..178685;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178709 179006 . + . ID=id-AFQR01000022.1:178709..179006;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 178718 178754 . + . ID=id-AFQR01000022.1:178718..178754;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 179834 180865 . + . ID=gene-GGE_1469;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank CDS 179834 180865 . + 0 ID=cds-EGT81283.1;Parent=gene-GGE_1469;Dbxref=GeneID:1708467,InterPro:IPR001544,InterPro:IPR005786,InterPro:IPR018300,PFAM:PF01063,PIR:PIRSF006468,TIGRFAM:TIGR01123,NCBI_GP:EGT81283.1;Name=EGT81283.1;Ontology_term=GO:0009081,GO:0008152,GO:0004084,GO:0003824;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||,catalytic activity|0003824||;go_process=branched chain family amino acid metabolic process|0009081||,metabolic process|0008152||;locus_tag=GGE_1469;product=Branched-chain-amino-acid aminotransferase;protein_id=EGT81283.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179834 180863 . + . ID=id-GGE_1469;Dbxref=InterPro:IPR001544,InterPro:IPR005786,PIR:PIRSF006468;Note=multi-dom~branched-chain amino acid aminotransferase%2C bcat1 type~branched-chain amino acid aminotransferase ii~HMMPanther:PTHR11825:SF2~branched-chain amino acid aminotransferase~branched-chain amino acid aminotransferase ii~HMMPanther:PTHR11825~family not named~aminotransferase%2C class iv%3B label: PRK13357;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179840 180308 . + . ID=id-GGE_1469-2;Note=Gene3D:3.30.470.10;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179843 180848 . + . ID=id-GGE_1469-3;Dbxref=InterPro:IPR001544;Note=superfamily:SSF56752~d-aminoacid aminotransferase-like plp-dependent enzyme~aminotransferase%2C class iv;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179921 180776 . + . ID=id-GGE_1469-4;Dbxref=InterPro:IPR005786,TIGRFAM:TIGR01123;Note=ilve_ii: branched-chain amino acid aminotran~branched-chain amino acid aminotransferase ii;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179957 180704 . + . ID=id-GGE_1469-5;Note=specific~superfamily%3B label: BCAT_beta_family;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 180050 180593 . + . ID=id-GGE_1469-6;Dbxref=InterPro:IPR001544,PFAM:PF01063;Note=aminotran_4~aminotransferase%2C class iv;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 180314 180341 . + . ID=id-GGE_1469-7;Note=Gene3D:3.20.10.10;gbkey=misc_feature;gene=ilvE;locus_tag=GGE_1469 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 179924 180503 . - . ID=id-AFQR01000022.1:179924..180503;Dbxref=InterPro:IPR018300;Note=PatternScan:PS00770~aa_transfer_class_4~aminotransferase%2C class iv%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 180980 181444 . - . ID=gene-GGE_1470;Name=GGE_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1470 GCA_000222085.2|AFQR01000022.1 Genbank CDS 180980 181444 . - 0 ID=cds-EGT81284.1;Parent=gene-GGE_1470;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT81284.1;Name=EGT81284.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1470;product=transposase like protein;protein_id=EGT81284.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 180995 181373 . - . ID=id-GGE_1470;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1470 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 180998 181373 . - . ID=id-GGE_1470-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1470 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181025 181337 . - . ID=id-GGE_1470-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1470 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181028 181334 . - . ID=id-GGE_1470-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1470 GCA_000222085.2|AFQR01000022.1 Genbank gene 181661 183220 . - . ID=gene-GGE_1471;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank CDS 181661 183220 . - 0 ID=cds-EGT81285.1;Parent=gene-GGE_1471;Dbxref=GeneID:226739626,InterPro:IPR001317,InterPro:IPR001674,InterPro:IPR004739,InterPro:IPR006220,InterPro:IPR011702,InterPro:IPR014729,InterPro:IPR017926,InterPro:IPR022310,InterPro:IPR022955,PFAM:PF00117,PFAM:PF00958,PFAM:PF02540,TIGRFAM:TIGR00884,TIGRFAM:TIGR00888,NCBI_GP:EGT81285.1;Name=EGT81285.1;Ontology_term=GO:0006177,GO:0009058,GO:0006541,GO:0006164,GO:0005524,GO:0003922,GO:0003824;gbkey=CDS;gene=guaA;go_function=ATP binding|0005524||,GMP synthase (glutamine-hydrolyzing) activity|0003922||,catalytic activity|0003824||;go_process=GMP biosynthetic process|0006177||,biosynthetic process|0009058||,glutamine metabolic process|0006541||,purine nucleotide biosynthetic process|0006164||;locus_tag=GGE_1471;product=GMP synthase glutamine-hydrolyzing;protein_id=EGT81285.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181673 183209 . - . ID=id-GGE_1471;Note=multi-dom%3B label: guaA;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181676 183206 . - . ID=id-GGE_1471-2;Note=HMMPanther:PTHR11922:SF2~gmp synthase~HMMPanther:PTHR11922~family not named;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181679 183203 . - . ID=id-GGE_1471-3;Dbxref=InterPro:IPR022955;Note=HAMAP:MF_00344~gmp_synthase~gmp synthase;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181679 182243 . - . ID=id-GGE_1471-4;Note=Gene3D:3.40.50.880;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181682 182336 . - . ID=id-GGE_1471-5;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181685 182243 . - . ID=id-GGE_1471-6;Dbxref=InterPro:IPR017926;Note=ProfileScan:PS51273~gatase_type_1~glutamine amidotransferase type 1;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181688 182234 . - . ID=id-GGE_1471-7;Dbxref=InterPro:IPR004739,TIGRFAM:TIGR00888;Note=guaa_nterm: gmp synthase (glutamine-hydrol~gmp synthase;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181688 182213 . - . ID=id-GGE_1471-8;Note=specific~superfamily%3B label: GATase1_GMP_Synthase;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181688 181706 . - . ID=id-GGE_1471-9;Dbxref=InterPro:IPR001317;Note=FPrintScan:PR00099~cpsgatase~carbamoyl-phosphate synthase%2C gatase domain;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181694 182213 . - . ID=id-GGE_1471-10;Dbxref=InterPro:IPR017926,PFAM:PF00117;Note=gatase~glutamine amidotransferase type 1;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182234 182369 . - . ID=id-GGE_1471-11;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182279 182603 . - . ID=id-GGE_1471-12;Dbxref=InterPro:IPR001674,TIGRFAM:TIGR00884;Note=guaa_cterm: gmp synthase (glutamine-hydrol~gmp synthase;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182333 182546 . - . ID=id-GGE_1471-13;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=guaA;locus_tag=GGE_1471 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181691 181820 . + . ID=id-AFQR01000022.1:181691..181820;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily~FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181697 181901 . + . ID=id-AFQR01000022.1:181697..181901;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily~FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181703 182174 . + . ID=id-AFQR01000022.1:181703..182174;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily~FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181706 181811 . + . ID=id-AFQR01000022.1:181706..181811;Dbxref=InterPro:IPR001317;Note=FPrintScan:PR00099~cpsgatase~carbamoyl-phosphate synthase%2C gatase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181712 181901 . + . ID=id-AFQR01000022.1:181712..181901;Dbxref=InterPro:IPR001317;Note=FPrintScan:PR00099~cpsgatase~carbamoyl-phosphate synthase%2C gatase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181781 182303 . + . ID=id-AFQR01000022.1:181781..182303;Dbxref=InterPro:IPR022310,PFAM:PF02540;Note=nad_synthase~nad/gmp synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 181937 182942 . + . ID=id-AFQR01000022.1:181937..182942;Dbxref=InterPro:IPR001674,PFAM:PF00958;Note=gmp_synt_c~gmp synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182024 182858 . + . ID=id-AFQR01000022.1:182024..182858;Note=superfamily:SSF54810~gmp synthetase c-terminal dimerization domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182036 182846 . + . ID=id-AFQR01000022.1:182036..182846;Note=Gene3D:3.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182237 182267 . + . ID=id-AFQR01000022.1:182237..182267;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 182859 182868 . + . ID=id-AFQR01000022.1:182859..182868;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183244 183265 . - . ID=id-AFQR01000022.1:183244..183265;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 183658 185124 . - . ID=gene-GGE_1472;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank CDS 183658 185124 . - 0 ID=cds-EGT81286.1;Parent=gene-GGE_1472;Dbxref=GeneID:1170553,InterPro:IPR000644,InterPro:IPR001093,InterPro:IPR005990,InterPro:IPR013785,InterPro:IPR015875,InterPro:IPR018529,PFAM:PF00478,PFAM:PF00571,PIR:PIRSF000130,TIGRFAM:TIGR01302,NCBI_GP:EGT81286.1;Name=EGT81286.1;Ontology_term=GO:0008152,GO:0055114,GO:0003938,GO:0003824,GO:0016491,GO:0005515;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||,catalytic activity|0003824||,oxidoreductase activity|0016491||,protein binding|0005515||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1472;product=putative dehydrogenase-like protein;protein_id=EGT81286.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183658 185119 . - . ID=id-GGE_1472;Dbxref=InterPro:IPR018529,PIR:PIRSF000130;Note=inosine-5'-monophosphate dehydrogenase~imp dehydrogenase-related;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183664 185092 . - . ID=id-GGE_1472-2;Note=superfamily:SSF51412~inosine monophosphate dehydrogenase (impdh);gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183667 185116 . - . ID=id-GGE_1472-3;Note=multi-dom%3B label: PRK05567;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183670 185107 . - . ID=id-GGE_1472-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183679 185074 . - . ID=id-GGE_1472-5;Note=HMMPanther:PTHR11911:SF6~inosine-5-monophosphate dehydrogenase~HMMPanther:PTHR11911~family not named;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183685 185056 . - . ID=id-GGE_1472-6;Dbxref=InterPro:IPR001093,PFAM:PF00478;Note=impdh~imp dehydrogenase/gmp reductase;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183685 185002 . - . ID=id-GGE_1472-7;Dbxref=InterPro:IPR005990,TIGRFAM:TIGR01302;Note=imp_dehydrog: inosine-5'-monophosphate d~imp dehydrogenase;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183685 184021 . - . ID=id-GGE_1472-8;Note=superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183862 183892 . - . ID=id-GGE_1472-9;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183943 183991 . - . ID=id-GGE_1472-10;Note=specific~superfamily%3B label: CBS_pair superfamily;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 184309 184399 . - . ID=id-GGE_1472-11;Note=specific~superfamily%3B label: IMPDH;gbkey=misc_feature;gene=guaB;locus_tag=GGE_1472 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183682 184621 . + . ID=id-AFQR01000022.1:183682..184621;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183682 184321 . + . ID=id-AFQR01000022.1:183682..184321;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183697 184546 . + . ID=id-AFQR01000022.1:183697..184546;Dbxref=InterPro:IPR015875;Note=PatternScan:PS00487~imp_dh_gmp_red~imp dehydrogenase / gmp reductase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183706 184498 . + . ID=id-AFQR01000022.1:183706..184498;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183787 183949 . + . ID=id-AFQR01000022.1:183787..183949;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183823 184108 . + . ID=id-AFQR01000022.1:183823..184108;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183829 183940 . + . ID=id-AFQR01000022.1:183829..183940;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183844 184120 . + . ID=id-AFQR01000022.1:183844..184120;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 183847 184099 . + . ID=id-AFQR01000022.1:183847..184099;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank gene 185254 186159 . + . ID=gene-GGE_1473;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank CDS 185254 186159 . + 0 ID=cds-EGT81287.1;Parent=gene-GGE_1473;Dbxref=InterPro:IPR003142,InterPro:IPR004143,InterPro:IPR004408,InterPro:IPR008988,PFAM:PF02237,PFAM:PF03099,TIGRFAM:TIGR00121,NCBI_GP:EGT81287.1;Name=EGT81287.1;Ontology_term=GO:0006464,GO:0004077,GO:0003824;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||,catalytic activity|0003824||;go_process=protein modification process|0006464||;locus_tag=GGE_1473;product=putative ligase-like protein;protein_id=EGT81287.1;transl_table=11 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185254 186157 . + . ID=id-GGE_1473;Note=multi-dom%3B label: PRK11886;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185254 185452 . + . ID=id-GGE_1473-2;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185295 185304 . + . ID=id-GGE_1473-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185416 185851 . + . ID=id-GGE_1473-4;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185434 185974 . + . ID=id-GGE_1473-5;Dbxref=InterPro:IPR004408;Note=HMMPanther:PTHR12835~family not named~biotin--acetyl-coa-carboxylase ligase;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185434 185827 . + . ID=id-GGE_1473-6;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185464 185944 . + . ID=id-GGE_1473-7;Dbxref=InterPro:IPR004408,TIGRFAM:TIGR00121;Note=bira_ligase: biotin-[acetyl-coa-carboxyla~biotin--acetyl-coa-carboxylase ligase;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185473 185611 . + . ID=id-GGE_1473-8;Note=superfamily%3B label: BPL_LplA_LipB superfamily;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185488 185596 . + . ID=id-GGE_1473-9;Dbxref=InterPro:IPR004143,PFAM:PF03099;Note=bpl_lpla_lipb~biotin/lipoate a/b protein ligase;gbkey=misc_feature;gene=birA;locus_tag=GGE_1473 GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185395 186013 . - . ID=id-AFQR01000022.1:185395..186013;Dbxref=InterPro:IPR003142,InterPro:IPR008988,PFAM:PF02237;Note=superfamily~superfamily:SSF50037~c-terminal domain of transcriptional repressors~transcriptional repressor~bpl_c~biotin protein ligase%3B label: BPL_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185398 186013 . - . ID=id-AFQR01000022.1:185398..186013;Note=Gene3D:2.30.30.100;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 185442 185451 . - . ID=id-AFQR01000022.1:185442..185451;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000022.1 Genbank sequence_feature 186184 186193 . - . ID=id-AFQR01000022.1:186184..186193;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000021.1 1 18509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000021.1 Genbank region 1 18509 . + . ID=AFQR01000021.1:1..18509;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000021.1 Genbank gene 736 1848 . + . ID=gene-GGE_1282;Name=GGE_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1282 GCA_000222085.2|AFQR01000021.1 Genbank CDS 736 1848 . + 0 ID=cds-EGT81341.1;Parent=gene-GGE_1282;Dbxref=GeneID:257465733,InterPro:IPR004846,PFAM:PF00263,NCBI_GP:EGT81341.1;Name=EGT81341.1;Note=ZP_05630104;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||;locus_tag=GGE_1282;product=putative phage-related secreted protein;protein_id=EGT81341.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 790 1264 . - . ID=id-AFQR01000021.1:790..1264;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 1180 1390 . - . ID=id-AFQR01000021.1:1180..1390;Note=superfamily%3B label: Secretin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 1189 1390 . - . ID=id-AFQR01000021.1:1189..1390;Dbxref=InterPro:IPR004846,PFAM:PF00263;Note=secretin~type ii/iii secretion system;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 2427 2589 . + . ID=id-AFQR01000021.1:2427..2589;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 2448 2586 . + . ID=id-AFQR01000021.1:2448..2586;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 2448 2475 . + . ID=id-AFQR01000021.1:2448..2475;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 3377 3862 . + . ID=gene-GGE_1283;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank CDS 3377 3862 . + 0 ID=cds-EGT81342.1;Parent=gene-GGE_1283;Dbxref=GeneID:14286132,InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,PFAM:PF00210,NCBI_GP:EGT81342.1;Name=EGT81342.1;Ontology_term=GO:0006879,GO:0006826,GO:0055114,GO:0005488,GO:0008199,GO:0016491,GO:0046914;gbkey=CDS;gene=ftnA;go_function=binding|0005488||,ferric iron binding|0008199||,oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=cellular iron ion homeostasis|0006879||,iron ion transport|0006826||,oxidation-reduction process|0055114||;locus_tag=GGE_1283;product=Putative ferritin-1;protein_id=EGT81342.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3377 3857 . + . ID=id-GGE_1283;Dbxref=InterPro:IPR012347;Note=Gene3D:1.20.1260.10~ferritin-related;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3377 3854 . + . ID=id-GGE_1283-2;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3377 3812 . + . ID=id-GGE_1283-3;Dbxref=InterPro:IPR009040;Note=ProfileScan:PS50905~ferritin_like~ferritin-like;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3386 3845 . + . ID=id-GGE_1283-4;Note=specific~superfamily%3B label: Ferritin_like superfamily;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3395 3836 . + . ID=id-GGE_1283-5;Dbxref=InterPro:IPR001519;Note=HMMPanther:PTHR11431:SF4~ferritin~HMMPanther:PTHR11431~family not named~ferritin;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3401 3788 . + . ID=id-GGE_1283-6;Note=multi-dom%3B label: Ferritin;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3401 3782 . + . ID=id-GGE_1283-7;Dbxref=InterPro:IPR008331,PFAM:PF00210;Note=ferritin~ferritin/dps protein domain;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_1283 GCA_000222085.2|AFQR01000021.1 Genbank gene 3880 4377 . + . ID=gene-GGE_1284;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank CDS 3880 4377 . + 0 ID=cds-EGT81343.1;Parent=gene-GGE_1284;Dbxref=InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,PFAM:PF00210,NCBI_GP:EGT81343.1;Name=EGT81343.1;Ontology_term=GO:0006879,GO:0006826,GO:0055114,GO:0005488,GO:0008199,GO:0016491,GO:0046914;gbkey=CDS;gene=ftnB;go_function=binding|0005488||,ferric iron binding|0008199||,oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=cellular iron ion homeostasis|0006879||,iron ion transport|0006826||,oxidation-reduction process|0055114||;locus_tag=GGE_1284;product=Putative ferritin-2;protein_id=EGT81343.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3880 4366 . + . ID=id-GGE_1284;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3880 4363 . + . ID=id-GGE_1284-2;Dbxref=InterPro:IPR012347;Note=Gene3D:1.20.1260.10~ferritin-related;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3880 4354 . + . ID=id-GGE_1284-3;Dbxref=InterPro:IPR001519;Note=HMMPanther:PTHR11431:SF4~ferritin~HMMPanther:PTHR11431~family not named~ferritin;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3880 4315 . + . ID=id-GGE_1284-4;Dbxref=InterPro:IPR009040;Note=ProfileScan:PS50905~ferritin_like~ferritin-like;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3889 4348 . + . ID=id-GGE_1284-5;Note=specific~superfamily%3B label: Ferritin_like superfamily;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3901 4294 . + . ID=id-GGE_1284-6;Note=multi-dom%3B label: Ferritin;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 3904 4285 . + . ID=id-GGE_1284-7;Dbxref=InterPro:IPR008331,PFAM:PF00210;Note=ferritin~ferritin/dps protein domain;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_1284 GCA_000222085.2|AFQR01000021.1 Genbank gene 5337 5630 . - . ID=gene-GGE_1285;Name=GGE_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1285 GCA_000222085.2|AFQR01000021.1 Genbank CDS 5337 5630 . - 0 ID=cds-EGT81344.1;Parent=gene-GGE_1285;Dbxref=GeneID:251792292,NCBI_GP:EGT81344.1;Name=EGT81344.1;Note=YP_003007014~NT05HA_0514;gbkey=CDS;locus_tag=GGE_1285;product=Hypothetical protein;protein_id=EGT81344.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 6387 6429 . - . ID=id-AFQR01000021.1:6387..6429;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 6931 7785 . - . ID=gene-GGE_1286;Name=GGE_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1286 GCA_000222085.2|AFQR01000021.1 Genbank CDS 6931 7785 . - 0 ID=cds-EGT81345.1;Parent=gene-GGE_1286;Dbxref=GeneID:145629863,PFAM:PF09718,NCBI_GP:EGT81345.1;Name=EGT81345.1;Note=ZP_01785656;gbkey=CDS;locus_tag=GGE_1286;product=Hypothetical protein;protein_id=EGT81345.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 6958 7039 . - . ID=id-GGE_1286;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1286 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 6991 7588 . - . ID=id-GGE_1286-2;Note=multi-dom%3B label: tape_meas_lam_C;gbkey=misc_feature;locus_tag=GGE_1286 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7075 7165 . - . ID=id-GGE_1286-3;Note=superfamily%3B label: Tape_meas_lam_C superfamily;gbkey=misc_feature;locus_tag=GGE_1286 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7078 7159 . - . ID=id-GGE_1286-4;Dbxref=PFAM:PF09718;Note=tape_meas_lam_c;gbkey=misc_feature;locus_tag=GGE_1286 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 6967 7396 . + . ID=id-AFQR01000021.1:6967..7396;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 6979 7312 . + . ID=id-AFQR01000021.1:6979..7312;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 7792 10302 . - . ID=gene-GGE_1287;Name=GGE_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1287 GCA_000222085.2|AFQR01000021.1 Genbank CDS 7792 10302 . - 0 ID=cds-EGT81346.1;Parent=gene-GGE_1287;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675,NCBI_GP:EGT81346.1;Name=EGT81346.1;Note=Hypothetical tape measure domain;gbkey=CDS;locus_tag=GGE_1287;product=putative tape measure domain-containing protein;protein_id=EGT81346.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7798 7834 . - . ID=id-GGE_1287;Note=seg;gbkey=misc_feature;locus_tag=GGE_1287 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7822 9265 . + . ID=id-AFQR01000021.1:7822..9265;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7825 9022 . + . ID=id-AFQR01000021.1:7825..9022;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7834 9790 . + . ID=id-AFQR01000021.1:7834..9790;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7837 8029 . + . ID=id-AFQR01000021.1:7837..8029;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7846 8296 . + . ID=id-AFQR01000021.1:7846..8296;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7858 9988 . + . ID=id-AFQR01000021.1:7858..9988;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7858 9244 . + . ID=id-AFQR01000021.1:7858..9244;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7867 8803 . + . ID=id-AFQR01000021.1:7867..8803;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7879 9355 . + . ID=id-AFQR01000021.1:7879..9355;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 7948 8350 . + . ID=id-AFQR01000021.1:7948..8350;Note=superfamily%3B label: COG3941 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 8017 8296 . + . ID=id-AFQR01000021.1:8017..8296;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675;Note=tape_meas_nterm: tape measure domain~tape measure domain;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 10355 10591 . - . ID=gene-GGE_1288;Name=GGE_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1288 GCA_000222085.2|AFQR01000021.1 Genbank CDS 10355 10591 . - 0 ID=cds-EGT81347.1;Parent=gene-GGE_1288;Dbxref=GeneID:301168937,NCBI_GP:EGT81347.1;Name=EGT81347.1;Note=CBW28532;gbkey=CDS;locus_tag=GGE_1288;product=Conserved putative Hypothetical protein;protein_id=EGT81347.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10376 10415 . - . ID=id-GGE_1288;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1288 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10391 10403 . - . ID=id-GGE_1288-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1288 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10424 10448 . + . ID=id-AFQR01000021.1:10424..10448;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 10607 10909 . - . ID=gene-GGE_1289;Name=GGE_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1289 GCA_000222085.2|AFQR01000021.1 Genbank CDS 10607 10909 . - 0 ID=cds-EGT81348.1;Parent=gene-GGE_1289;Dbxref=GeneID:145629859,InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT81348.1;Name=EGT81348.1;Note=ZP_01785652;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1289;product=Putative transcription regulator;protein_id=EGT81348.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10667 10793 . - . ID=id-GGE_1289;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1289 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10676 10808 . - . ID=id-GGE_1289-2;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1289 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10706 10769 . - . ID=id-GGE_1289-3;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1289 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10706 10754 . - . ID=id-GGE_1289-4;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=superfamily~hth_3~helix-turn-helix type 3%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_1289 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 10899 10959 . - . ID=id-AFQR01000021.1:10899..10959;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 11106 11262 . - . ID=id-AFQR01000021.1:11106..11262;Note=superfamily%3B label: Gp49 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 11136 11232 . - . ID=id-AFQR01000021.1:11136..11232;Dbxref=InterPro:IPR009241,PFAM:PF05973;Note=gp49~protein of unknown function duf891;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 11345 11569 . - . ID=gene-GGE_1290;Name=GGE_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1290 GCA_000222085.2|AFQR01000021.1 Genbank CDS 11345 11569 . - 0 ID=cds-EGT81349.1;Parent=gene-GGE_1290;Dbxref=GeneID:145629857,NCBI_GP:EGT81349.1;Name=EGT81349.1;Note=ZP_01785650~CGSHi22121_00202;gbkey=CDS;locus_tag=GGE_1290;product=Hypothetical protein;protein_id=EGT81349.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank gene 11614 12021 . - . ID=gene-GGE_1291;Name=GGE_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1291 GCA_000222085.2|AFQR01000021.1 Genbank CDS 11614 12021 . - 0 ID=cds-EGT81350.1;Parent=gene-GGE_1291;Dbxref=GeneID:145629856,NCBI_GP:EGT81350.1;Name=EGT81350.1;Note=ZP_01785649~CGSHi22121_00197;gbkey=CDS;locus_tag=GGE_1291;product=Hypothetical protein;protein_id=EGT81350.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 11644 11914 . + . ID=id-AFQR01000021.1:11644..11914;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12053 12077 . - . ID=id-AFQR01000021.1:12053..12077;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12098 12107 . - . ID=id-AFQR01000021.1:12098..12107;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12271 12280 . + . ID=id-AFQR01000021.1:12271..12280;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12289 12298 . - . ID=id-AFQR01000021.1:12289..12298;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 12304 12954 . - . ID=gene-GGE_1292;Name=GGE_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1292 GCA_000222085.2|AFQR01000021.1 Genbank CDS 12304 12954 . - 0 ID=cds-EGT81351.1;Parent=gene-GGE_1292;Dbxref=GeneID:145635844,NCBI_GP:EGT81351.1;Name=EGT81351.1;Note=ZP_01791535~CGSHiAA_00080;gbkey=CDS;locus_tag=GGE_1292;product=Hypothetical protein;protein_id=EGT81351.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12340 12571 . + . ID=id-AFQR01000021.1:12340..12571;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 12957 13367 . - . ID=gene-GGE_1293;Name=GGE_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1293 GCA_000222085.2|AFQR01000021.1 Genbank CDS 12957 13367 . - 0 ID=cds-EGT81352.1;Parent=gene-GGE_1293;Dbxref=GeneID:145629853,InterPro:IPR009312,PFAM:PF06141,NCBI_GP:EGT81352.1;Name=EGT81352.1;Note=ZP_01785646;gbkey=CDS;locus_tag=GGE_1293;product=putative phage tail like protein;protein_id=EGT81352.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12957 13362 . - . ID=id-GGE_1293;Dbxref=InterPro:IPR009312,PFAM:PF06141;Note=phage_tail_u~phage minor tail u;gbkey=misc_feature;locus_tag=GGE_1293 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12966 13356 . - . ID=id-GGE_1293-2;Note=superfamily~superfamily:SSF143749~phage tail like protein%3B label: Phage_tail_U superfamily;gbkey=misc_feature;locus_tag=GGE_1293 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 12999 13182 . + . ID=id-AFQR01000021.1:12999..13182;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 13354 13905 . - . ID=gene-GGE_1294;Name=GGE_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1294 GCA_000222085.2|AFQR01000021.1 Genbank CDS 13354 13905 . - 0 ID=cds-EGT81353.1;Parent=gene-GGE_1294;Dbxref=GeneID:301168945,InterPro:IPR010633,PFAM:PF06763,PIR:PIRSF004395,NCBI_GP:EGT81353.1;Name=EGT81353.1;Note=CBW28540;gbkey=CDS;locus_tag=GGE_1294;product=putative phage minor tail protein;protein_id=EGT81353.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 13354 13858 . - . ID=id-GGE_1294;Dbxref=InterPro:IPR010633,PIR:PIRSF004395;Note=tail component protein z%2C bacteriophage lambda type~prophage minor tail z;gbkey=misc_feature;locus_tag=GGE_1294 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 13375 13846 . - . ID=id-GGE_1294-2;Dbxref=InterPro:IPR010633,PFAM:PF06763;Note=minor_tail_z~prophage minor tail z;gbkey=misc_feature;locus_tag=GGE_1294 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 13405 13420 . - . ID=id-GGE_1294-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1294 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 13483 13738 . - . ID=id-GGE_1294-4;Note=superfamily%3B label: Minor_tail_Z superfamily;gbkey=misc_feature;locus_tag=GGE_1294 GCA_000222085.2|AFQR01000021.1 Genbank gene 13908 14219 . - . ID=gene-GGE_1295;Name=GGE_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1295 GCA_000222085.2|AFQR01000021.1 Genbank CDS 13908 14219 . - 0 ID=cds-EGT81354.1;Parent=gene-GGE_1295;Dbxref=GeneID:145635841,NCBI_GP:EGT81354.1;Name=EGT81354.1;Note=ZP_01791532~CGSHiAA_00065;gbkey=CDS;locus_tag=GGE_1295;product=Hypothetical protein;protein_id=EGT81354.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 13992 14136 . - . ID=id-GGE_1295;Note=Gene3D:2.40.10.210;gbkey=misc_feature;locus_tag=GGE_1295 GCA_000222085.2|AFQR01000021.1 Genbank gene 14789 16816 . - . ID=gene-GGE_1296;Name=GGE_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank CDS 14789 16816 . - 0 ID=cds-EGT81355.1;Parent=gene-GGE_1296;Dbxref=GeneID:145640030,InterPro:IPR001907,InterPro:IPR018774,InterPro:IPR023562,PFAM:PF00574,PFAM:PF10124,NCBI_GP:EGT81355.1;Name=EGT81355.1;Note=ZP_01795627;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_1296;product=putative Clp-like protease;protein_id=EGT81355.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14843 15350 . - . ID=id-GGE_1296;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14849 15311 . - . ID=id-GGE_1296-2;Note=Gene3D:3.90.226.10;gbkey=misc_feature;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14891 15269 . - . ID=id-GGE_1296-3;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14963 15203 . - . ID=id-GGE_1296-4;Dbxref=InterPro:IPR001907,PFAM:PF00574;Note=clp_protease~peptidase s14%2C clpp;gbkey=misc_feature;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14972 15359 . - . ID=id-GGE_1296-5;Dbxref=InterPro:IPR023562;Note=HMMPanther:PTHR10381:SF3~atp-dependent clp protease proteolytic subunit~HMMPanther:PTHR10381~atp-dependent clp protease proteolytic subunit~peptidase s14/s49;gbkey=misc_feature;locus_tag=GGE_1296 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14822 15287 . + . ID=id-AFQR01000021.1:14822..15287;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14834 16130 . + . ID=id-AFQR01000021.1:14834..16130;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14843 15077 . + . ID=id-AFQR01000021.1:14843..15077;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14849 15305 . + . ID=id-AFQR01000021.1:14849..15305;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14852 14984 . + . ID=id-AFQR01000021.1:14852..14984;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 14966 16391 . + . ID=id-AFQR01000021.1:14966..16391;Dbxref=InterPro:IPR018774,PFAM:PF10124;Note=superfamily~mu-like_gpt~mu-like major head subunit gpt%2C prophage%3B label: Mu-like_gpT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000021.1 Genbank gene 16752 18275 . - . ID=gene-GGE_1297;Name=GGE_1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1297 GCA_000222085.2|AFQR01000021.1 Genbank CDS 16752 18275 . - 0 ID=cds-EGT81356.1;Parent=gene-GGE_1297;Dbxref=GeneID:145640029,InterPro:IPR006429,PFAM:PF05136,TIGRFAM:TIGR01539,NCBI_GP:EGT81356.1;Name=EGT81356.1;Note=ZP_01795626;Ontology_term=GO:0019028,GO:0003677;gbkey=CDS;go_component=viral capsid|0019028||;go_function=DNA binding|0003677||;locus_tag=GGE_1297;product=bacteriophage capsid protein;protein_id=EGT81356.1;transl_table=11 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 16767 18228 . - . ID=id-GGE_1297;Note=multi-dom%3B label: COG5511;gbkey=misc_feature;locus_tag=GGE_1297 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 16842 18102 . - . ID=id-GGE_1297-2;Dbxref=InterPro:IPR006429,TIGRFAM:TIGR01539;Note=portal_lambda: phage portal protein%2C la~phage portal protein%2C lambda;gbkey=misc_feature;locus_tag=GGE_1297 GCA_000222085.2|AFQR01000021.1 Genbank sequence_feature 16848 17787 . - . ID=id-GGE_1297-3;Dbxref=InterPro:IPR006429,PFAM:PF05136;Note=phage_portal_2~phage portal protein%2C lambda;gbkey=misc_feature;locus_tag=GGE_1297 ##sequence-region AFQR01000020.1 1 158826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000020.1 Genbank region 1 158826 . + . ID=AFQR01000020.1:1..158826;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000020.1 Genbank gene 205 837 . + . ID=gene-GGE_1148;Name=GGE_1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1148 GCA_000222085.2|AFQR01000020.1 Genbank CDS 205 837 . + 0 ID=cds-EGT81453.1;Parent=gene-GGE_1148;Dbxref=GeneID:229844526,NCBI_GP:EGT81453.1;Name=EGT81453.1;Note=ZP_04464666~CGSHi6P18H1_09430;gbkey=CDS;locus_tag=GGE_1148;product=Hypothetical protein;protein_id=EGT81453.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 271 763 . - . ID=id-AFQR01000020.1:271..763;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 280 763 . - . ID=id-AFQR01000020.1:280..763;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 447 456 . - . ID=id-AFQR01000020.1:447..456;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 830 1318 . + . ID=gene-GGE_1149;Name=GGE_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1149 GCA_000222085.2|AFQR01000020.1 Genbank CDS 830 1318 . + 0 ID=cds-EGT81454.1;Parent=gene-GGE_1149;Dbxref=GeneID:145639959,NCBI_GP:EGT81454.1;Name=EGT81454.1;Note=ZP_01795558~CGSHiII_07033;gbkey=CDS;locus_tag=GGE_1149;product=Hypothetical protein;protein_id=EGT81454.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 899 1163 . + . ID=id-GGE_1149;Note=Gene3D:2.30.30.330;gbkey=misc_feature;locus_tag=GGE_1149 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 1136 1145 . - . ID=id-AFQR01000020.1:1136..1145;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 1482 1601 . + . ID=gene-GGE_1150;Name=GGE_1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1150 GCA_000222085.2|AFQR01000020.1 Genbank CDS 1482 1601 . + 0 ID=cds-EGT81455.1;Parent=gene-GGE_1150;Dbxref=InterPro:IPR019294,PFAM:PF10122,NCBI_GP:EGT81455.1;Name=EGT81455.1;Note=HI_1522.1;gbkey=CDS;locus_tag=GGE_1150;product=Mu-like prophage FluMu protein com;protein_id=EGT81455.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 1491 1590 . + . ID=id-GGE_1150;Note=superfamily%3B label: Mu-like_Com superfamily;gbkey=misc_feature;locus_tag=GGE_1150 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 1494 1584 . + . ID=id-GGE_1150-2;Dbxref=InterPro:IPR019294,PFAM:PF10122;Note=mu-like_com~mu-like prophage protein com;gbkey=misc_feature;locus_tag=GGE_1150 GCA_000222085.2|AFQR01000020.1 Genbank gene 1663 1986 . + . ID=gene-GGE_1151;Name=GGE_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1151 GCA_000222085.2|AFQR01000020.1 Genbank CDS 1663 1986 . + 0 ID=cds-EGT81456.1;Parent=gene-GGE_1151;Dbxref=InterPro:IPR012327,PFAM:PF02086,NCBI_GP:EGT81456.1;Name=EGT81456.1;Note=Hypothetical s-adenosyl-L-methionine-dependent methyltransferase;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||;locus_tag=GGE_1151;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT81456.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 1690 1879 . + . ID=id-GGE_1151;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1151 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 1705 1912 . + . ID=id-GGE_1151-2;Dbxref=InterPro:IPR012327,PFAM:PF02086;Note=methyltransfd12~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;locus_tag=GGE_1151 GCA_000222085.2|AFQR01000020.1 Genbank gene 2057 2506 . + . ID=gene-GGE_1152;Name=GGE_1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1152 GCA_000222085.2|AFQR01000020.1 Genbank CDS 2057 2506 . + 0 ID=cds-EGT81457.1;Parent=gene-GGE_1152;Dbxref=NCBI_GP:EGT81457.1;Name=EGT81457.1;Note=Hypothetical s-adenosyl-L-methionine-dependent methyltransferase;gbkey=CDS;locus_tag=GGE_1152;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT81457.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 2057 2501 . + . ID=id-GGE_1152;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1152 GCA_000222085.2|AFQR01000020.1 Genbank gene 3946 4320 . - . ID=gene-GGE_1153;Name=GGE_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1153 GCA_000222085.2|AFQR01000020.1 Genbank CDS 3946 4320 . - 0 ID=cds-EGT81458.1;Parent=gene-GGE_1153;Dbxref=GeneID:145629493,InterPro:IPR010534,PFAM:PF06530,NCBI_GP:EGT81458.1;Name=EGT81458.1;Note=ZP_01785291;Ontology_term=GO:0045449,GO:0003677,GO:0030401;gbkey=CDS;go_function=DNA binding|0003677||,transcription antiterminator activity|0030401||;go_process=regulation of transcription|0045449||;locus_tag=GGE_1153;product=putative phage antitermination Q-like protein;protein_id=EGT81458.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 3946 4234 . - . ID=id-GGE_1153;Note=superfamily%3B label: Phage_antitermQ superfamily;gbkey=misc_feature;locus_tag=GGE_1153 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 3952 4255 . - . ID=id-GGE_1153-2;Dbxref=InterPro:IPR010534,PFAM:PF06530;Note=phage_antitermq~phage antitermination q-like;gbkey=misc_feature;locus_tag=GGE_1153 GCA_000222085.2|AFQR01000020.1 Genbank gene 4314 4670 . - . ID=gene-GGE_1154;Name=GGE_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1154 GCA_000222085.2|AFQR01000020.1 Genbank CDS 4314 4670 . - 0 ID=cds-EGT81459.1;Parent=gene-GGE_1154;Dbxref=GeneID:240948780,InterPro:IPR008822,InterPro:IPR016281,PFAM:PF05866,PIR:PIRSF001007,NCBI_GP:EGT81459.1;Name=EGT81459.1;Note=ZP_04753152;Ontology_term=GO:0006310,GO:0006281,GO:0008821,GO:0000287;gbkey=CDS;go_function=crossover junction endodeoxyribonuclease activity|0008821||,magnesium ion binding|0000287||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_1154;product=endodeoxyribonuclease RusA;protein_id=EGT81459.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4314 4668 . - . ID=id-GGE_1154;Dbxref=InterPro:IPR016281,PIR:PIRSF001007;Note=crossover junction endodeoxyribonuclease%2C rusa type~endodeoxyribonuclease%2C rusa;gbkey=misc_feature;locus_tag=GGE_1154 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4314 4662 . - . ID=id-GGE_1154-2;Dbxref=InterPro:IPR008822;Note=superfamily:SSF103084~holliday junction resolvase rusa~endodeoxyribonuclease%2C rusa-like~Gene3D:3.30.1330.70~endodeoxyribonuclease%2C rusa-like;gbkey=misc_feature;locus_tag=GGE_1154 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4314 4659 . - . ID=id-GGE_1154-3;Note=superfamily%3B label: RusA superfamily;gbkey=misc_feature;locus_tag=GGE_1154 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4338 4641 . - . ID=id-GGE_1154-4;Dbxref=InterPro:IPR008822,PFAM:PF05866;Note=rusa~endodeoxyribonuclease%2C rusa-like;gbkey=misc_feature;locus_tag=GGE_1154 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4691 4700 . - . ID=id-AFQR01000020.1:4691..4700;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4768 4954 . - . ID=id-AFQR01000020.1:4768..4954;Dbxref=InterPro:IPR010373,PFAM:PF06147;Note=superfamily~duf968~protein of unknown function duf968%3B label: DUF968 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4967 5105 . - . ID=id-AFQR01000020.1:4967..5105;Note=superfamily%3B label: DUF968 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 4970 5105 . - . ID=id-AFQR01000020.1:4970..5105;Dbxref=InterPro:IPR010373,PFAM:PF06147;Note=duf968~protein of unknown function duf968;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 5750 6385 . - . ID=gene-GGE_1155;Name=GGE_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1155 GCA_000222085.2|AFQR01000020.1 Genbank CDS 5750 6385 . - 0 ID=cds-EGT81460.1;Parent=gene-GGE_1155;Dbxref=InterPro:IPR009731,PFAM:PF06992,NCBI_GP:EGT81460.1;Name=EGT81460.1;Note=Hypothetical replication P;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA-dependent DNA replication initiation|0006270||;locus_tag=GGE_1155;product=putative replication P;protein_id=EGT81460.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 5810 6311 . - . ID=id-GGE_1155;Dbxref=InterPro:IPR009731,PFAM:PF06992;Note=phage_lambda_p~replication p;gbkey=misc_feature;locus_tag=GGE_1155 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 5813 6314 . - . ID=id-GGE_1155-2;Note=superfamily%3B label: Phage_lambda_P superfamily;gbkey=misc_feature;locus_tag=GGE_1155 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 5837 6185 . + . ID=id-AFQR01000020.1:5837..6185;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 6382 7281 . - . ID=gene-GGE_1156;Name=GGE_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1156 GCA_000222085.2|AFQR01000020.1 Genbank CDS 6382 7281 . - 0 ID=cds-EGT81461.1;Parent=gene-GGE_1156;Dbxref=InterPro:IPR011741,PFAM:PF09524,NCBI_GP:EGT81461.1;Name=EGT81461.1;Note=Hypothetical phage protein;gbkey=CDS;locus_tag=GGE_1156;product=putative phage protein;protein_id=EGT81461.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 6457 6583 . - . ID=id-GGE_1156;Note=superfamily%3B label: Phage_rep_O superfamily;gbkey=misc_feature;locus_tag=GGE_1156 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 6436 6766 . + . ID=id-AFQR01000020.1:6436..6766;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 6562 6895 . + . ID=id-AFQR01000020.1:6562..6895;Dbxref=InterPro:IPR011741,PFAM:PF09524;Note=phg_2220_c~phage conserved hypothetical protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 6625 6832 . + . ID=id-AFQR01000020.1:6625..6832;Note=superfamily%3B label: Phg_2220_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 7242 7937 . - . ID=gene-GGE_1157;Name=GGE_1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1157 GCA_000222085.2|AFQR01000020.1 Genbank CDS 7242 7937 . - 0 ID=cds-EGT81462.1;Parent=gene-GGE_1157;Dbxref=GeneID:319776200,InterPro:IPR005039,InterPro:IPR019104,PFAM:PF03374,PFAM:PF09669,NCBI_GP:EGT81462.1;Name=EGT81462.1;Note=YP_004138688;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1157;product=putative phage regulatory protein%2C Rha-like protein;protein_id=EGT81462.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7242 7719 . - . ID=id-GGE_1157;Note=multi-dom%3B label: COG3646;gbkey=misc_feature;locus_tag=GGE_1157 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7290 7494 . - . ID=id-GGE_1157-2;Dbxref=InterPro:IPR019104,PFAM:PF09669;Note=superfamily~phage_prha~phage regulatory protein%2C rha-like%3B label: Phage_pRha superfamily;gbkey=misc_feature;locus_tag=GGE_1157 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7308 7572 . + . ID=id-AFQR01000020.1:7308..7572;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7545 7626 . + . ID=id-AFQR01000020.1:7545..7626;Dbxref=InterPro:IPR005039,PFAM:PF03374;Note=ant~phage antirepressor protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7560 7620 . + . ID=id-AFQR01000020.1:7560..7620;Note=superfamily%3B label: ANT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 7624 7633 . + . ID=id-AFQR01000020.1:7624..7633;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 7988 8359 . - . ID=gene-GGE_1158;Name=GGE_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1158 GCA_000222085.2|AFQR01000020.1 Genbank CDS 7988 8359 . - 0 ID=cds-EGT81463.1;Parent=gene-GGE_1158;Dbxref=GeneID:152978885,NCBI_GP:EGT81463.1;Name=EGT81463.1;Note=YP_001344514~Asuc_1217;gbkey=CDS;locus_tag=GGE_1158;product=Hypothetical protein;protein_id=EGT81463.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8369 8378 . - . ID=id-AFQR01000020.1:8369..8378;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 8480 8668 . - . ID=gene-GGE_1159;Name=GGE_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1159 GCA_000222085.2|AFQR01000020.1 Genbank CDS 8480 8668 . - 0 ID=cds-EGT81464.1;Parent=gene-GGE_1159;Dbxref=GeneID:68250057,InterPro:IPR010982,NCBI_GP:EGT81464.1;Name=EGT81464.1;Note=YP_249169;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1159;product=putative lambda repressor-like%2C DNA-binding protein;protein_id=EGT81464.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8486 8663 . - . ID=id-GGE_1159;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1159 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8486 8657 . - . ID=id-GGE_1159-2;Note=superfamily%3B label: COG4197 superfamily;gbkey=misc_feature;locus_tag=GGE_1159 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8489 8657 . - . ID=id-GGE_1159-3;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1159 GCA_000222085.2|AFQR01000020.1 Genbank gene 8777 9475 . + . ID=gene-GGE_1160;Name=GGE_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank CDS 8777 9475 . + 0 ID=cds-EGT81465.1;Parent=gene-GGE_1160;Dbxref=GeneID:68250056,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,PFAM:PF01381,NCBI_GP:EGT81465.1;Name=EGT81465.1;Note=YP_249168;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_1160;product=transcriptional regulator;protein_id=EGT81465.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8777 8999 . + . ID=id-GGE_1160;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8783 8972 . + . ID=id-GGE_1160-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8798 8945 . + . ID=id-GGE_1160-3;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8801 8942 . + . ID=id-GGE_1160-4;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8807 8936 . + . ID=id-GGE_1160-5;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 9068 9179 . + . ID=id-GGE_1160-6;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 9077 9164 . + . ID=id-GGE_1160-7;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature;locus_tag=GGE_1160 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 8972 9224 . - . ID=id-AFQR01000020.1:8972..9224;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 9023 9209 . - . ID=id-AFQR01000020.1:9023..9209;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 9529 10068 . + . ID=gene-GGE_1161;Name=GGE_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1161 GCA_000222085.2|AFQR01000020.1 Genbank CDS 9529 10068 . + 0 ID=cds-EGT81466.1;Parent=gene-GGE_1161;Dbxref=GeneID:290474228,NCBI_GP:EGT81466.1;Name=EGT81466.1;Note=YP_003467105~XBJ1_1184;gbkey=CDS;locus_tag=GGE_1161;product=Hypothetical protein;protein_id=EGT81466.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 9541 9571 . + . ID=id-GGE_1161;Note=seg;gbkey=misc_feature;locus_tag=GGE_1161 GCA_000222085.2|AFQR01000020.1 Genbank gene 10065 10829 . + . ID=gene-GGE_1162;Name=GGE_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1162 GCA_000222085.2|AFQR01000020.1 Genbank CDS 10065 10829 . + 0 ID=cds-EGT81467.1;Parent=gene-GGE_1162;Dbxref=GeneID:212710114,InterPro:IPR014960,PFAM:PF08861,NCBI_GP:EGT81467.1;Name=EGT81467.1;Note=ZP_03318242~PROVALCAL_01167;gbkey=CDS;locus_tag=GGE_1162;product=Hypothetical protein;protein_id=EGT81467.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 10143 10329 . + . ID=id-GGE_1162;Dbxref=InterPro:IPR014960,PFAM:PF08861;Note=duf1828~domain of unknown function duf1828;gbkey=misc_feature;locus_tag=GGE_1162 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 10143 10323 . + . ID=id-GGE_1162-2;Note=superfamily%3B label: DUF1828 superfamily;gbkey=misc_feature;locus_tag=GGE_1162 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 11351 11372 . - . ID=id-AFQR01000020.1:11351..11372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 11702 12226 . - . ID=gene-GGE_1163;Name=GGE_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1163 GCA_000222085.2|AFQR01000020.1 Genbank CDS 11702 12226 . - 0 ID=cds-EGT81468.1;Parent=gene-GGE_1163;Dbxref=GeneID:31544007,NCBI_GP:EGT81468.1;Name=EGT81468.1;Note=NP_852732;gbkey=CDS;locus_tag=GGE_1163;product=Hypothetical protein;protein_id=EGT81468.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 11738 11771 . - . ID=id-GGE_1163;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1163 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 11741 11765 . - . ID=id-GGE_1163-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1163 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 11753 11996 . + . ID=id-AFQR01000020.1:11753..11996;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 11771 11864 . + . ID=id-AFQR01000020.1:11771..11864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 12870 13673 . + . ID=gene-GGE_1164;Name=GGE_1164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1164 GCA_000222085.2|AFQR01000020.1 Genbank CDS 12870 13673 . + 0 ID=cds-EGT81469.1;Parent=gene-GGE_1164;Dbxref=GeneID:254361480,InterPro:IPR019276,PFAM:PF10065,NCBI_GP:EGT81469.1;Name=EGT81469.1;Note=ZP_04977619;gbkey=CDS;locus_tag=GGE_1164;product=putative bacteriophage protein;protein_id=EGT81469.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 12885 13653 . + . ID=id-GGE_1164;Dbxref=InterPro:IPR019276,PFAM:PF10065;Note=duf2303~protein of unknown function duf2303;gbkey=misc_feature;locus_tag=GGE_1164 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 12885 13632 . + . ID=id-GGE_1164-2;Note=superfamily%3B label: DUF2303 superfamily;gbkey=misc_feature;locus_tag=GGE_1164 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 12906 13053 . - . ID=id-AFQR01000020.1:12906..13053;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13763 13772 . + . ID=id-AFQR01000020.1:13763..13772;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 13876 14682 . + . ID=gene-GGE_1165;Name=GGE_1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1165 GCA_000222085.2|AFQR01000020.1 Genbank CDS 13876 14682 . + 0 ID=cds-EGT81470.1;Parent=gene-GGE_1165;Dbxref=GeneID:319897236,NCBI_GP:EGT81470.1;Name=EGT81470.1;Note=YP_004135431;gbkey=CDS;locus_tag=GGE_1165;product=Hypothetical protein;protein_id=EGT81470.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13876 14014 . + . ID=id-GGE_1165;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1165 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13915 14164 . - . ID=id-AFQR01000020.1:13915..14164;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13924 14515 . - . ID=id-AFQR01000020.1:13924..14515;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13930 14281 . - . ID=id-AFQR01000020.1:13930..14281;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13942 14119 . - . ID=id-AFQR01000020.1:13942..14119;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 13945 14362 . - . ID=id-AFQR01000020.1:13945..14362;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 14788 15090 . + . ID=gene-GGE_1166;Name=GGE_1166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1166 GCA_000222085.2|AFQR01000020.1 Genbank CDS 14788 15090 . + 0 ID=cds-EGT81471.1;Parent=gene-GGE_1166;Dbxref=GeneID:145629912,NCBI_GP:EGT81471.1;Name=EGT81471.1;Note=ZP_01785700~CGSHi22121_05382;gbkey=CDS;locus_tag=GGE_1166;product=Hypothetical protein;protein_id=EGT81471.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 14851 14857 . + . ID=id-GGE_1166;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1166 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 14815 15025 . - . ID=id-AFQR01000020.1:14815..15025;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 14857 15004 . - . ID=id-AFQR01000020.1:14857..15004;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 15361 16182 . + . ID=gene-GGE_1167;Name=GGE_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1167 GCA_000222085.2|AFQR01000020.1 Genbank CDS 15361 16182 . + 0 ID=cds-EGT81472.1;Parent=gene-GGE_1167;Dbxref=InterPro:IPR017880,InterPro:IPR018004,PFAM:PF04383,NCBI_GP:EGT81472.1;Name=EGT81472.1;Note=Hypothetical kilA-like protein;gbkey=CDS;locus_tag=GGE_1167;product=putative kilA-like protein;protein_id=EGT81472.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 15361 15679 . + . ID=id-GGE_1167;Dbxref=InterPro:IPR017880;Note=ProfileScan:PS51301~kila_n~kila;gbkey=misc_feature;locus_tag=GGE_1167 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 15370 15682 . + . ID=id-GGE_1167-2;Note=superfamily%3B label: KilA-N superfamily;gbkey=misc_feature;locus_tag=GGE_1167 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 15385 15664 . + . ID=id-GGE_1167-3;Dbxref=InterPro:IPR018004,PFAM:PF04383;Note=kila-n~kila/apses-type hth%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1167 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 16198 16207 . - . ID=id-AFQR01000020.1:16198..16207;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 16270 16560 . + . ID=gene-GGE_1168;Name=GGE_1168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1168 GCA_000222085.2|AFQR01000020.1 Genbank CDS 16270 16560 . + 0 ID=cds-EGT81473.1;Parent=gene-GGE_1168;Dbxref=GeneID:145632044,NCBI_GP:EGT81473.1;Name=EGT81473.1;Note=ZP_01787789~CGSHi22421_00627;gbkey=CDS;locus_tag=GGE_1168;product=Hypothetical protein;protein_id=EGT81473.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank gene 16656 16961 . + . ID=gene-GGE_1169;Name=GGE_1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1169 GCA_000222085.2|AFQR01000020.1 Genbank CDS 16656 16961 . + 0 ID=cds-EGT81474.1;Parent=gene-GGE_1169;Dbxref=GeneID:145632043,NCBI_GP:EGT81474.1;Name=EGT81474.1;Note=ZP_01787788~CGSHi22421_00622;gbkey=CDS;locus_tag=GGE_1169;product=Hypothetical protein;protein_id=EGT81474.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 16695 16725 . + . ID=id-GGE_1169;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1169 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 16698 16713 . - . ID=id-AFQR01000020.1:16698..16713;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 16935 16944 . - . ID=id-AFQR01000020.1:16935..16944;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 16958 17251 . + . ID=gene-GGE_1170;Name=GGE_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1170 GCA_000222085.2|AFQR01000020.1 Genbank CDS 16958 17251 . + 0 ID=cds-EGT81475.1;Parent=gene-GGE_1170;Dbxref=GeneID:145641703,NCBI_GP:EGT81475.1;Name=EGT81475.1;Note=ZP_01797279~CGSHiR3021_02089;gbkey=CDS;locus_tag=GGE_1170;product=Hypothetical protein;protein_id=EGT81475.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank gene 17264 18214 . + . ID=gene-GGE_1171;Name=GGE_1171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1171 GCA_000222085.2|AFQR01000020.1 Genbank CDS 17264 18214 . + 0 ID=cds-EGT81476.1;Parent=gene-GGE_1171;Dbxref=GeneID:319897235,InterPro:IPR004590,InterPro:IPR018330,PFAM:PF03837,TIGRFAM:TIGR00616,NCBI_GP:EGT81476.1;Name=EGT81476.1;Note=YP_004135430;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA metabolic process|0006259||;locus_tag=GGE_1171;product=recombinational DNA repair protein%2C rece pathway;protein_id=EGT81476.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 17264 18047 . + . ID=id-GGE_1171;Note=superfamily%3B label: RecT superfamily;gbkey=misc_feature;locus_tag=GGE_1171 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 17264 17984 . + . ID=id-GGE_1171-2;Dbxref=InterPro:IPR004590,TIGRFAM:TIGR00616;Note=rect: recombinase%2C phage rect family~dna single-strand annealing protein rect;gbkey=misc_feature;locus_tag=GGE_1171 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 17381 17894 . + . ID=id-GGE_1171-3;Dbxref=InterPro:IPR018330,PFAM:PF03837;Note=rect~dna single-strand annealing protein rect-like;gbkey=misc_feature;locus_tag=GGE_1171 GCA_000222085.2|AFQR01000020.1 Genbank gene 18189 18839 . + . ID=gene-GGE_1172;Name=GGE_1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1172 GCA_000222085.2|AFQR01000020.1 Genbank CDS 18189 18839 . + 0 ID=cds-EGT81477.1;Parent=gene-GGE_1172;Dbxref=GeneID:145636014,InterPro:IPR011335,InterPro:IPR011604,InterPro:IPR019080,PFAM:PF09588,NCBI_GP:EGT81477.1;Name=EGT81477.1;Note=ZP_01791694;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||,nuclease activity|0004518||;locus_tag=GGE_1172;product=putative exonuclease-like protein;protein_id=EGT81477.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18189 18834 . + . ID=id-GGE_1172;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;locus_tag=GGE_1172 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18213 18606 . + . ID=id-GGE_1172-2;Dbxref=InterPro:IPR011604;Note=Gene3D:3.90.320.10~exonuclease%2C phage-type/recb;gbkey=misc_feature;locus_tag=GGE_1172 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18279 18288 . + . ID=id-GGE_1172-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1172 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18291 18522 . + . ID=id-GGE_1172-4;Dbxref=InterPro:IPR019080,PFAM:PF09588;Note=yqaj~yqaj viral recombinase family;gbkey=misc_feature;locus_tag=GGE_1172 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18216 18549 . - . ID=id-AFQR01000020.1:18216..18549;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18240 18750 . - . ID=id-AFQR01000020.1:18240..18750;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18255 18771 . - . ID=id-AFQR01000020.1:18255..18771;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 18839 19273 . + . ID=gene-GGE_1173;Name=GGE_1173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank CDS 18839 19273 . + 0 ID=cds-EGT81478.1;Parent=gene-GGE_1173;Dbxref=GeneID:145636015,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,TIGRFAM:TIGR00621,NCBI_GP:EGT81478.1;Name=EGT81478.1;Note=ZP_01791695;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||;go_process=DNA replication|0006260||;locus_tag=GGE_1173;product=Single-strand binding protein;protein_id=EGT81478.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18839 19271 . + . ID=id-GGE_1173;Dbxref=InterPro:IPR011344,InterPro:IPR016027;Note=HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding~superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18845 19268 . + . ID=id-GGE_1173-2;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18848 19265 . + . ID=id-GGE_1173-3;Dbxref=InterPro:IPR011344,TIGRFAM:TIGR00621;Note=ssb: single-strand binding protein~single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18854 19154 . + . ID=id-GGE_1173-4;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18857 19148 . + . ID=id-GGE_1173-5;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18860 19271 . + . ID=id-GGE_1173-6;Dbxref=InterPro:IPR011344,InterPro:IPR012340,InterPro:IPR016027,TIGRFAM:TIGR00621;Note=HMMPanther:PTHR10302~single-stranded dna-binding protein~single-strand dna-binding~ssb: single-strand binding protein~single-strand dna-binding~Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold~superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18860 19166 . + . ID=id-GGE_1173-7;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18860 19163 . + . ID=id-GGE_1173-8;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=specific~superfamily~ssb~primosome prib/single-strand dna-binding%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 18863 19142 . + . ID=id-GGE_1173-9;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;locus_tag=GGE_1173 GCA_000222085.2|AFQR01000020.1 Genbank gene 19285 20145 . + . ID=gene-GGE_1174;Name=GGE_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1174 GCA_000222085.2|AFQR01000020.1 Genbank CDS 19285 20145 . + 0 ID=cds-EGT81479.1;Parent=gene-GGE_1174;Dbxref=InterPro:IPR016177,NCBI_GP:EGT81479.1;Name=EGT81479.1;Note=Hypothetical dNA-binding%2C integrase-like protein;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1174;product=putative dNA-binding%2C integrase-like protein;protein_id=EGT81479.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 19354 19468 . + . ID=id-GGE_1174;Dbxref=InterPro:IPR016177;Note=superfamily:SSF54171~dna-binding domain~dna-binding%2C integrase-type;gbkey=misc_feature;locus_tag=GGE_1174 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 19393 19414 . + . ID=id-GGE_1174-2;Note=superfamily%3B label: AP2 superfamily;gbkey=misc_feature;locus_tag=GGE_1174 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 19618 19798 . - . ID=id-AFQR01000020.1:19618..19798;Note=multi-dom%3B label: PLN02745;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 20226 20795 . + . ID=gene-GGE_1175;Name=GGE_1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1175 GCA_000222085.2|AFQR01000020.1 Genbank CDS 20226 20795 . + 0 ID=cds-EGT81480.1;Parent=gene-GGE_1175;Dbxref=GeneID:319775700,NCBI_GP:EGT81480.1;Name=EGT81480.1;Note=YP_004138188~HICON_10420;gbkey=CDS;locus_tag=GGE_1175;product=Hypothetical protein;protein_id=EGT81480.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 20265 20355 . - . ID=id-AFQR01000020.1:20265..20355;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 20792 21028 . + . ID=gene-GGE_1176;Name=GGE_1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1176 GCA_000222085.2|AFQR01000020.1 Genbank CDS 20792 21028 . + 0 ID=cds-EGT81481.1;Parent=gene-GGE_1176;Dbxref=GeneID:229844462,NCBI_GP:EGT81481.1;Name=EGT81481.1;Note=ZP_04464602~CGSHi6P18H1_09090;gbkey=CDS;locus_tag=GGE_1176;product=Hypothetical protein;protein_id=EGT81481.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 20861 20921 . + . ID=id-GGE_1176;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1176 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 20822 20999 . - . ID=id-AFQR01000020.1:20822..20999;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 20985 20994 . - . ID=id-AFQR01000020.1:20985..20994;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 21025 21381 . + . ID=gene-GGE_1177;Name=GGE_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1177 GCA_000222085.2|AFQR01000020.1 Genbank CDS 21025 21381 . + 0 ID=cds-EGT81482.1;Parent=gene-GGE_1177;Dbxref=GeneID:319775698,NCBI_GP:EGT81482.1;Name=EGT81482.1;Note=YP_004138186~HICON_10400;gbkey=CDS;locus_tag=GGE_1177;product=Hypothetical protein;protein_id=EGT81482.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 21091 21304 . - . ID=id-AFQR01000020.1:21091..21304;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 21441 21908 . + . ID=gene-GGE_1178;Name=GGE_1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1178 GCA_000222085.2|AFQR01000020.1 Genbank CDS 21441 21908 . + 0 ID=cds-EGT81483.1;Parent=gene-GGE_1178;Dbxref=GeneID:229844277,NCBI_GP:EGT81483.1;Name=EGT81483.1;Note=ZP_04464417~CGSHi6P18H1_08145;gbkey=CDS;locus_tag=GGE_1178;product=Hypothetical protein;protein_id=EGT81483.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank gene 21919 22416 . + . ID=gene-GGE_1179;Name=GGE_1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1179 GCA_000222085.2|AFQR01000020.1 Genbank CDS 21919 22416 . + 0 ID=cds-EGT81484.1;Parent=gene-GGE_1179;Dbxref=GeneID:145635917,NCBI_GP:EGT81484.1;Name=EGT81484.1;Note=ZP_01791604~CGSHiAA_00535;gbkey=CDS;locus_tag=GGE_1179;product=Hypothetical protein;protein_id=EGT81484.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank gene 22627 22827 . + . ID=gene-GGE_1180;Name=GGE_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1180 GCA_000222085.2|AFQR01000020.1 Genbank CDS 22627 22827 . + 0 ID=cds-EGT81485.1;Parent=gene-GGE_1180;Dbxref=GeneID:145635720,InterPro:IPR010260,PFAM:PF05930,NCBI_GP:EGT81485.1;Name=EGT81485.1;Note=ZP_01791415;gbkey=CDS;locus_tag=GGE_1180;product=putative prophage CP4-57 regulatory;protein_id=EGT81485.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 22627 22801 . + . ID=id-GGE_1180;Note=superfamily%3B label: Phage_AlpA superfamily;gbkey=misc_feature;locus_tag=GGE_1180 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 22657 22768 . + . ID=id-GGE_1180-2;Dbxref=InterPro:IPR010260,PFAM:PF05930;Note=phage_alpa~prophage cp4-57 regulatory;gbkey=misc_feature;locus_tag=GGE_1180 GCA_000222085.2|AFQR01000020.1 Genbank gene 22824 24164 . - . ID=gene-GGE_1181;Name=GGE_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1181 GCA_000222085.2|AFQR01000020.1 Genbank CDS 22824 24164 . - 0 ID=cds-EGT81486.1;Parent=gene-GGE_1181;Dbxref=GeneID:68249842,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT81486.1;Name=EGT81486.1;Note=YP_248954;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1181;product=prophage CP4-57-like integrase;protein_id=EGT81486.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 22920 24066 . - . ID=id-GGE_1181;Note=multi-dom%3B label: PRK09692;gbkey=misc_feature;locus_tag=GGE_1181 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 23013 23934 . - . ID=id-GGE_1181-2;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1181 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 23121 23235 . + . ID=id-AFQR01000020.1:23121..23235;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 23328 23574 . + . ID=id-AFQR01000020.1:23328..23574;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 23331 23577 . + . ID=id-AFQR01000020.1:23331..23577;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 23367 23568 . + . ID=id-AFQR01000020.1:23367..23568;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 24617 26053 . + . ID=gene-GGE_1182;Name=pykA;gbkey=Gene;gene=pykA;gene_biotype=protein_coding;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank CDS 24617 26053 . + 0 ID=cds-EGT81487.1;Parent=gene-GGE_1182;Dbxref=GeneID:1170698,InterPro:IPR001697,InterPro:IPR011037,InterPro:IPR015793,InterPro:IPR015794,InterPro:IPR015795,InterPro:IPR015806,InterPro:IPR015813,InterPro:IPR018209,PFAM:PF00224,PFAM:PF02887,TIGRFAM:TIGR01064,NCBI_GP:EGT81487.1;Name=EGT81487.1;Ontology_term=GO:0006096,GO:0003824,GO:0000287,GO:0030955,GO:0004743;gbkey=CDS;gene=pykA;go_function=catalytic activity|0003824||,magnesium ion binding|0000287||,potassium ion binding|0030955||,pyruvate kinase activity|0004743||;go_process=glycolysis|0006096||;locus_tag=GGE_1182;product=Pyruvate kinase;protein_id=EGT81487.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24626 26015 . + . ID=id-GGE_1182;Note=multi-dom%3B label: PRK05826;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24626 25997 . + . ID=id-GGE_1182-2;Dbxref=InterPro:IPR001697;Note=HMMPanther:PTHR11817~family not named~pyruvate kinase;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24629 25664 . + . ID=id-GGE_1182-3;Dbxref=InterPro:IPR015813;Note=superfamily:SSF51621~phosphoenolpyruvate/pyruvate domain~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24632 26036 . + . ID=id-GGE_1182-4;Note=superfamily%3B label: Pyruvate_Kinase superfamily;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24635 26033 . + . ID=id-GGE_1182-5;Dbxref=InterPro:IPR001697,TIGRFAM:TIGR01064;Note=pyruv_kin: pyruvate kinase~pyruvate kinase;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24635 25637 . + . ID=id-GGE_1182-6;Dbxref=InterPro:IPR015793,PFAM:PF00224;Note=pk~pyruvate kinase%2C barrel;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24839 24911 . + . ID=id-GGE_1182-7;Dbxref=InterPro:IPR011037;Note=superfamily:SSF50800~pk beta-barrel domain-like~pyruvate kinase-like%2C insert domain;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24848 24899 . + . ID=id-GGE_1182-8;Dbxref=InterPro:IPR015806;Note=Gene3D:2.40.33.10~pyruvate kinase%2C beta-barrel insert domain;gbkey=misc_feature;gene=pykA;locus_tag=GGE_1182 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24656 25271 . - . ID=id-AFQR01000020.1:24656..25271;Dbxref=InterPro:IPR018209;Note=PatternScan:PS00110~pyruvate_kinase~pyruvate kinase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24662 25187 . - . ID=id-AFQR01000020.1:24662..25187;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24662 25085 . - . ID=id-AFQR01000020.1:24662..25085;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24668 25574 . - . ID=id-AFQR01000020.1:24668..25574;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24668 24806 . - . ID=id-AFQR01000020.1:24668..24806;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24674 25517 . - . ID=id-AFQR01000020.1:24674..25517;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24692 25442 . - . ID=id-AFQR01000020.1:24692..25442;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24692 25367 . - . ID=id-AFQR01000020.1:24692..25367;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24698 25286 . - . ID=id-AFQR01000020.1:24698..25286;Dbxref=InterPro:IPR001697;Note=FPrintScan:PR01050~pyruvtknase~pyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 24950 25706 . - . ID=id-AFQR01000020.1:24950..25706;Dbxref=InterPro:IPR015795,PFAM:PF02887;Note=pk_c~pyruvate kinase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 25004 25667 . - . ID=id-AFQR01000020.1:25004..25667;Dbxref=InterPro:IPR015795;Note=superfamily:SSF52935~pk c-terminal domain-like~pyruvate kinase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 25052 25613 . - . ID=id-AFQR01000020.1:25052..25613;Dbxref=InterPro:IPR015794;Note=Gene3D:3.40.1380.20~pyruvate kinase%2C alpha/beta;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 25097 25133 . - . ID=id-AFQR01000020.1:25097..25133;Dbxref=InterPro:IPR015813;Note=Gene3D:3.20.20.60~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26121 26130 . - . ID=id-AFQR01000020.1:26121..26130;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 26195 27601 . + . ID=gene-GGE_1183;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank CDS 26195 27601 . + 0 ID=cds-EGT81488.1;Parent=gene-GGE_1183;Dbxref=GeneID:20141388,InterPro:IPR007692,InterPro:IPR007693,InterPro:IPR007694,InterPro:IPR016136,PFAM:PF00772,PFAM:PF03796,TIGRFAM:TIGR00665,NCBI_GP:EGT81488.1;Name=EGT81488.1;Ontology_term=GO:0006260,GO:0005524,GO:0003677,GO:0003678;gbkey=CDS;gene=dnaB;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA helicase activity|0003678||;go_process=DNA replication|0006260||;locus_tag=GGE_1183;product=Replicative DNA helicase;protein_id=EGT81488.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26195 27599 . + . ID=id-GGE_1183;Note=multi-dom%3B label: PRK06904;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26246 26537 . + . ID=id-GGE_1183-2;Dbxref=InterPro:IPR007693;Note=superfamily:SSF48024~n-terminal domain of dnab helicase~dna helicase%2C dnab-like;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26252 27521 . + . ID=id-GGE_1183-3;Dbxref=InterPro:IPR007692,TIGRFAM:TIGR00665;Note=dnab: replicative dna helicase~dna helicase%2C dnab type;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26252 26504 . + . ID=id-GGE_1183-4;Note=superfamily%3B label: DnaB superfamily;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26255 26504 . + . ID=id-GGE_1183-5;Dbxref=InterPro:IPR016136;Note=Gene3D:1.10.860.10~dna helicase dnab/dna primase dnag;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26255 26501 . + . ID=id-GGE_1183-6;Dbxref=InterPro:IPR007693,PFAM:PF00772;Note=dnab~dna helicase%2C dnab-like;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26765 27008 . + . ID=id-GGE_1183-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26777 27002 . + . ID=id-GGE_1183-8;Dbxref=InterPro:IPR007694;Note=ProfileScan:PS51199~sf4_helicase~dna helicase%2C dnab-like;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26786 26960 . + . ID=id-GGE_1183-9;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26813 26930 . + . ID=id-GGE_1183-10;Note=specific~superfamily%3B label: DnaB_C;gbkey=misc_feature;gene=dnaB;locus_tag=GGE_1183 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 26756 26795 . - . ID=id-AFQR01000020.1:26756..26795;Dbxref=InterPro:IPR007694,PFAM:PF03796;Note=dnab_c~dna helicase%2C dnab-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 27611 28693 . + . ID=gene-GGE_1184;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank CDS 27611 28693 . + 0 ID=cds-EGT81489.1;Parent=gene-GGE_1184;Dbxref=GeneID:1168421,InterPro:IPR000821,InterPro:IPR001608,InterPro:IPR009006,InterPro:IPR011079,InterPro:IPR020622,PFAM:PF00842,PFAM:PF01168,TIGRFAM:TIGR00492,NCBI_GP:EGT81489.1;Name=EGT81489.1;Ontology_term=GO:0006522,GO:0008784,GO:0003824;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||,catalytic activity|0003824||;go_process=alanine metabolic process|0006522||;locus_tag=GGE_1184;product=Alanine racemase;protein_id=EGT81489.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27620 28682 . + . ID=id-GGE_1184;Dbxref=InterPro:IPR000821;Note=HAMAP:MF_01201~ala_racemase~alanine racemase;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27623 28682 . + . ID=id-GGE_1184-2;Dbxref=InterPro:IPR000821,TIGRFAM:TIGR00492;Note=alr: alanine racemase~alanine racemase;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27623 28679 . + . ID=id-GGE_1184-3;Note=multi-dom%3B label: alr;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27626 28676 . + . ID=id-GGE_1184-4;Note=specific~superfamily%3B label: PLPDE_III superfamily;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27641 28292 . + . ID=id-GGE_1184-5;Note=superfamily:SSF51419~plp-binding barrel;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27641 28250 . + . ID=id-GGE_1184-6;Dbxref=InterPro:IPR001608,PFAM:PF01168;Note=ala_racemase_n~alanine racemase;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27650 28220 . + . ID=id-GGE_1184-7;Note=Gene3D:3.20.20.10;gbkey=misc_feature;gene=alr;locus_tag=GGE_1184 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27644 27710 . - . ID=id-AFQR01000020.1:27644..27710;Dbxref=InterPro:IPR020622;Note=PatternScan:PS00395~alanine_racemase~alanine racemase%2C pyridoxal-phosphate attachment site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27647 28085 . - . ID=id-AFQR01000020.1:27647..28085;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27650 27980 . - . ID=id-AFQR01000020.1:27650..27980;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27653 28634 . - . ID=id-AFQR01000020.1:27653..28634;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27659 28415 . - . ID=id-AFQR01000020.1:27659..28415;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27659 28364 . - . ID=id-AFQR01000020.1:27659..28364;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27662 27695 . - . ID=id-AFQR01000020.1:27662..27695;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27665 28478 . - . ID=id-AFQR01000020.1:27665..28478;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27668 27800 . - . ID=id-AFQR01000020.1:27668..27800;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27695 28196 . - . ID=id-AFQR01000020.1:27695..28196;Dbxref=InterPro:IPR000821;Note=FPrintScan:PR00992~alaracemase~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 27983 28316 . - . ID=id-AFQR01000020.1:27983..28316;Dbxref=InterPro:IPR011079,PFAM:PF00842;Note=ala_racemase_c~alanine racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28037 28265 . - . ID=id-AFQR01000020.1:28037..28265;Dbxref=InterPro:IPR009006;Note=superfamily:SSF50621~alanine racemase c-terminal domain-like~alanine racemase/group iv decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28043 28259 . - . ID=id-AFQR01000020.1:28043..28259;Dbxref=InterPro:IPR009006;Note=Gene3D:2.40.37.10~alanine racemase/group iv decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28754 28763 . + . ID=id-AFQR01000020.1:28754..28763;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 28800 30449 . + . ID=gene-GGE_1185;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank CDS 28800 30449 . + 0 ID=cds-EGT81490.1;Parent=gene-GGE_1185;Dbxref=GeneID:81170494,InterPro:IPR001672,InterPro:IPR018189,InterPro:IPR023096,PFAM:PF00342,NCBI_GP:EGT81490.1;Name=EGT81490.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||;go_process=gluconeogenesis|0006094||,glycolysis|0006096||;locus_tag=GGE_1185;product=Glucose-6-phosphate isomerase;protein_id=EGT81490.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28806 30444 . + . ID=id-GGE_1185;Note=multi-dom%3B label: pgi;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28812 30438 . + . ID=id-GGE_1185-2;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28821 30429 . + . ID=id-GGE_1185-3;Dbxref=InterPro:IPR001672;Note=HMMPanther:PTHR11469~family not named~phosphoglucose isomerase (pgi);gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28827 30420 . + . ID=id-GGE_1185-4;Dbxref=InterPro:IPR001672;Note=ProfileScan:PS51463~p_glucose_isomerase_3~phosphoglucose isomerase (pgi);gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28878 29115 . + . ID=id-GGE_1185-5;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28938 30240 . + . ID=id-GGE_1185-6;Dbxref=InterPro:IPR001672;Note=HAMAP:MF_00473~g6p_isomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28956 30273 . + . ID=id-GGE_1185-7;Dbxref=InterPro:IPR001672,PFAM:PF00342;Note=pgi~phosphoglucose isomerase (pgi);gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 29163 29289 . + . ID=id-GGE_1185-8;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 29256 29853 . + . ID=id-GGE_1185-9;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 29496 29505 . + . ID=id-GGE_1185-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=pgi;locus_tag=GGE_1185 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28842 30294 . - . ID=id-AFQR01000020.1:28842..30294;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28842 29595 . - . ID=id-AFQR01000020.1:28842..29595;Dbxref=InterPro:IPR018189;Note=PatternScan:PS00765~p_glucose_isomerase_1~phosphoglucose isomerase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28845 30252 . - . ID=id-AFQR01000020.1:28845..30252;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28854 30294 . - . ID=id-AFQR01000020.1:28854..30294;Dbxref=InterPro:IPR018189;Note=PatternScan:PS00174~p_glucose_isomerase_2~phosphoglucose isomerase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28857 30198 . - . ID=id-AFQR01000020.1:28857..30198;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28857 29583 . - . ID=id-AFQR01000020.1:28857..29583;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28860 29250 . - . ID=id-AFQR01000020.1:28860..29250;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28866 29814 . - . ID=id-AFQR01000020.1:28866..29814;Dbxref=InterPro:IPR001672;Note=FPrintScan:PR00662~g6pisomerase~phosphoglucose isomerase (pgi);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 28941 30309 . - . ID=id-AFQR01000020.1:28941..30309;Dbxref=InterPro:IPR023096;Note=Gene3D:1.10.1390.10~phosphoglucose isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 29373 29793 . - . ID=id-AFQR01000020.1:29373..29793;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 30671 31135 . - . ID=gene-GGE_1186;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=GGE_1186 GCA_000222085.2|AFQR01000020.1 Genbank CDS 30671 31135 . - 0 ID=cds-EGT81491.1;Parent=gene-GGE_1186;Dbxref=InterPro:IPR008816,PFAM:PF05433,NCBI_GP:EGT81491.1;Name=EGT81491.1;Ontology_term=GO:0019867;gbkey=CDS;gene=pcp;go_component=outer membrane|0019867||;locus_tag=GGE_1186;product=Outer membrane lipoprotein pcp;protein_id=EGT81491.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 30671 31073 . - . ID=id-GGE_1186;Note=superfamily%3B label: Rick_17kDa_Anti superfamily;gbkey=misc_feature;gene=pcp;locus_tag=GGE_1186 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 30671 30728 . - . ID=id-GGE_1186-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=pcp;locus_tag=GGE_1186 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 30707 31076 . + . ID=id-AFQR01000020.1:30707..31076;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 30791 30851 . + . ID=id-AFQR01000020.1:30791..30851;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 30800 30854 . + . ID=id-AFQR01000020.1:30800..30854;Dbxref=InterPro:IPR008816,PFAM:PF05433;Note=rick_17kda_anti~rickettsia 17kda surface antigen;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 31162 31458 . - . ID=gene-GGE_1187;Name=GGE_1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1187 GCA_000222085.2|AFQR01000020.1 Genbank CDS 31162 31458 . - 0 ID=cds-EGT81492.1;Parent=gene-GGE_1187;Dbxref=GeneID:319776475,NCBI_GP:EGT81492.1;Name=EGT81492.1;Note=YP_004138963;gbkey=CDS;locus_tag=GGE_1187;product=putative lipoprotein;protein_id=EGT81492.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 31162 31219 . - . ID=id-GGE_1187;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1187 GCA_000222085.2|AFQR01000020.1 Genbank gene 31463 32032 . - . ID=gene-GGE_1188;Name=GGE_1188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1188 GCA_000222085.2|AFQR01000020.1 Genbank CDS 31463 32032 . - 0 ID=cds-EGT81493.1;Parent=gene-GGE_1188;Dbxref=GeneID:68249834,InterPro:IPR010393,PFAM:PF06185,NCBI_GP:EGT81493.1;Name=EGT81493.1;Note=YP_248946;gbkey=CDS;locus_tag=GGE_1188;product=putative glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase;protein_id=EGT81493.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 31463 32030 . - . ID=id-GGE_1188;Note=superfamily:SSF54593~glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase;gbkey=misc_feature;locus_tag=GGE_1188 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 31475 32018 . - . ID=id-GGE_1188-2;Note=Gene3D:3.10.180.10;gbkey=misc_feature;locus_tag=GGE_1188 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 31478 32015 . - . ID=id-GGE_1188-3;Dbxref=InterPro:IPR010393,PFAM:PF06185;Note=yecm~protein of unknown function duf991;gbkey=misc_feature;locus_tag=GGE_1188 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 31574 31919 . - . ID=id-GGE_1188-4;Note=specific~superfamily%3B label: Glo_EDI_BRP_like superfamily;gbkey=misc_feature;locus_tag=GGE_1188 GCA_000222085.2|AFQR01000020.1 Genbank gene 32112 33845 . + . ID=gene-GGE_1189;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank CDS 32112 33845 . + 0 ID=cds-EGT81494.1;Parent=gene-GGE_1189;Dbxref=GeneID:166232791,InterPro:IPR001278,InterPro:IPR001412,InterPro:IPR005148,InterPro:IPR008909,InterPro:IPR009080,InterPro:IPR014729,InterPro:IPR015945,PFAM:PF00750,PFAM:PF03485,PFAM:PF05746,TIGRFAM:TIGR00456,NCBI_GP:EGT81494.1;Name=EGT81494.1;Ontology_term=GO:0006420,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004814,GO:0000166;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,arginine-tRNA ligase activity|0004814||,nucleotide binding|0000166||;go_process=arginyl-tRNA aminoacylation|0006420||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1189;product=Arginyl-tRNA synthetase;protein_id=EGT81494.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32112 32430 . + . ID=id-GGE_1189;Dbxref=InterPro:IPR005148;Note=superfamily:SSF55190~arginyl-trna synthetase (argrs) 'additional' domain~arginyl trna synthetase%2C class ic;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32118 32418 . + . ID=id-GGE_1189-2;Dbxref=InterPro:IPR005148;Note=Gene3D:3.30.1360.70~arginyl trna synthetase%2C class ic;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32121 33837 . + . ID=id-GGE_1189-3;Dbxref=InterPro:IPR001278,TIGRFAM:TIGR00456;Note=multi-dom~args: arginyl-trna synthetase~arginyl-trna synthetase%2C class ic~HMMPanther:PTHR11956~family not named~arginyl-trna synthetase%2C class ic%3B label: argS;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32127 33831 . + . ID=id-GGE_1189-4;Dbxref=InterPro:IPR001278;Note=HAMAP:MF_00123~arg_trna_synth~arginyl-trna synthetase%2C class ic;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32127 32361 . + . ID=id-GGE_1189-5;Dbxref=InterPro:IPR005148,PFAM:PF03485;Note=superfamily~arg_trna_synt_n~arginyl trna synthetase%2C class ic%3B label: Arg_tRNA_synt_N superfamily;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32400 33165 . + . ID=id-GGE_1189-6;Dbxref=InterPro:IPR015945,PFAM:PF00750;Note=trna-synt_1d~arginyl-trna synthetase%2C class ic%2C core;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32433 33153 . + . ID=id-GGE_1189-7;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32442 33144 . + . ID=id-GGE_1189-8;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32454 32928 . + . ID=id-GGE_1189-9;Note=specific~superfamily%3B label: ArgRS_core;gbkey=misc_feature;gene=argS;locus_tag=GGE_1189 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32148 33768 . - . ID=id-AFQR01000020.1:32148..33768;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32148 32478 . - . ID=id-AFQR01000020.1:32148..32478;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32154 32571 . - . ID=id-AFQR01000020.1:32154..32571;Dbxref=InterPro:IPR015945;Note=FPrintScan:PR01038~trnasyntharg~arginyl-trna synthetase%2C class ic%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32160 32454 . - . ID=id-AFQR01000020.1:32160..32454;Dbxref=InterPro:IPR015945;Note=FPrintScan:PR01038~trnasyntharg~arginyl-trna synthetase%2C class ic%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32163 32499 . - . ID=id-AFQR01000020.1:32163..32499;Dbxref=InterPro:IPR015945;Note=FPrintScan:PR01038~trnasyntharg~arginyl-trna synthetase%2C class ic%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32178 33021 . - . ID=id-AFQR01000020.1:32178..33021;Dbxref=InterPro:IPR015945;Note=FPrintScan:PR01038~trnasyntharg~arginyl-trna synthetase%2C class ic%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32466 33492 . - . ID=id-AFQR01000020.1:32466..33492;Dbxref=InterPro:IPR008909,PFAM:PF05746;Note=dalr_1~dalr anticodon binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32484 33474 . - . ID=id-AFQR01000020.1:32484..33474;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding~Gene3D:1.10.730.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 32580 33378 . - . ID=id-AFQR01000020.1:32580..33378;Note=specific~superfamily%3B label: Anticodon_Ia_Arg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 33545 33554 . - . ID=id-AFQR01000020.1:33545..33554;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34088 34097 . + . ID=id-AFQR01000020.1:34088..34097;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 34139 34630 . - . ID=gene-GGE_1190;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank CDS 34139 34630 . - 0 ID=cds-EGT81495.1;Parent=gene-GGE_1190;Dbxref=GeneID:1170547,InterPro:IPR002912,InterPro:IPR004789,InterPro:IPR019455,PFAM:PF01842,PFAM:PF10369,TIGRFAM:TIGR00119,NCBI_GP:EGT81495.1;Name=EGT81495.1;Ontology_term=GO:0009082,GO:0008152,GO:0003984,GO:0016597;gbkey=CDS;gene=ilvH;go_function=acetolactate synthase activity|0003984||,amino acid binding|0016597||;go_process=branched chain family amino acid biosynthetic process|0009082||,metabolic process|0008152||;locus_tag=GGE_1190;product=Acetolactate synthase small subunit;protein_id=EGT81495.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34139 34625 . - . ID=id-GGE_1190;Note=multi-dom%3B label: ilvH;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34139 34616 . - . ID=id-GGE_1190-2;Dbxref=InterPro:IPR004789,TIGRFAM:TIGR00119;Note=acolac_sm: acetolactate synthase%2C small sub~acetolactate synthase%2C small subunit;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34139 34370 . - . ID=id-GGE_1190-3;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34139 34367 . - . ID=id-GGE_1190-4;Note=BlastProDom:PD002844~ilvh_haein_p45260;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34148 34352 . - . ID=id-GGE_1190-5;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34151 34349 . - . ID=id-GGE_1190-6;Note=Gene3D:3.30.70.260;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34151 34334 . - . ID=id-GGE_1190-7;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34373 34397 . - . ID=id-GGE_1190-8;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;gene=ilvH;locus_tag=GGE_1190 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34364 34391 . + . ID=id-AFQR01000020.1:34364..34391;Dbxref=InterPro:IPR019455,PFAM:PF10369;Note=superfamily~als_ss_c~acetolactate synthase%2C small subunit%3B label: ALS_ss_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 34630 36351 . - . ID=gene-GGE_1191;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank CDS 34630 36351 . - 0 ID=cds-EGT81496.1;Parent=gene-GGE_1191;Dbxref=GeneID:1170548,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,PFAM:PF00205,PFAM:PF02775,PFAM:PF02776,TIGRFAM:TIGR00118,NCBI_GP:EGT81496.1;Name=EGT81496.1;Ontology_term=GO:0009082,GO:0003984,GO:0003824,GO:0050660,GO:0000287,GO:0030976,GO:0016740;gbkey=CDS;gene=ilvI;go_function=acetolactate synthase activity|0003984||,catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,magnesium ion binding|0000287||,thiamine pyrophosphate binding|0030976||,transferase activity|0016740||;go_process=branched chain family amino acid biosynthetic process|0009082||;locus_tag=GGE_1191;product=Acetolactate synthase large subunit;protein_id=EGT81496.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34630 36349 . - . ID=id-GGE_1191;Note=multi-dom~HMMPanther:PTHR18968:SF13~acetolactate synthase~HMMPanther:PTHR18968~family not named%3B label: PRK06882;gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34630 35191 . - . ID=id-GGE_1191-2;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34630 35182 . - . ID=id-GGE_1191-3;Note=Gene3D:3.40.50.970;gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34642 36322 . - . ID=id-GGE_1191-4;Dbxref=InterPro:IPR012846,TIGRFAM:TIGR00118;Note=acolac_lg: acetolactate synthase%2C large sub~acetolactate synthase%2C large subunit%2C biosynthetic;gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34645 35119 . - . ID=id-GGE_1191-5;Dbxref=InterPro:IPR012001,PFAM:PF02776;Note=tpp_enzyme_n~thiamine pyrophosphate enzyme tpp-binding domain;gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34654 35098 . - . ID=id-GGE_1191-6;Note=specific~superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature;gene=ilvI;locus_tag=GGE_1191 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34666 35221 . + . ID=id-AFQR01000020.1:34666..35221;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34690 35920 . + . ID=id-AFQR01000020.1:34690..35920;Dbxref=InterPro:IPR000399;Note=PatternScan:PS00187~tpp_enzymes~tpp-binding enzyme%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 34996 35257 . + . ID=id-AFQR01000020.1:34996..35257;Note=superfamily%3B label: TPP_enzyme_M superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35035 35218 . + . ID=id-AFQR01000020.1:35035..35218;Dbxref=InterPro:IPR012000,PFAM:PF00205;Note=tpp_enzyme_m~thiamine pyrophosphate enzyme%2C central domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35080 35809 . + . ID=id-AFQR01000020.1:35080..35809;Dbxref=InterPro:IPR011766,PFAM:PF02775;Note=tpp_enzyme_c~thiamine pyrophosphate enzyme tpp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35158 35191 . + . ID=id-AFQR01000020.1:35158..35191;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35161 35200 . + . ID=id-AFQR01000020.1:35161..35200;Note=Gene3D:3.40.50.1220;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35179 35743 . + . ID=id-AFQR01000020.1:35179..35743;Note=specific~superfamily%3B label: TPP_AHAS;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35230 35737 . + . ID=id-AFQR01000020.1:35230..35737;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 35245 35731 . + . ID=id-AFQR01000020.1:35245..35731;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36369 36378 . - . ID=id-AFQR01000020.1:36369..36378;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 36616 38136 . - . ID=gene-GGE_1192;Name=GGE_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1192 GCA_000222085.2|AFQR01000020.1 Genbank CDS 36616 38136 . - 0 ID=cds-EGT81497.1;Parent=gene-GGE_1192;Dbxref=GeneID:1175906,InterPro:IPR018461,PFAM:PF03553,NCBI_GP:EGT81497.1;Name=EGT81497.1;Note=HI_1586;Ontology_term=GO:0006885,GO:0006814,GO:0016021,GO:0015385;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=sodium:hydrogen antiporter activity|0015385||;go_process=regulation of pH|0006885||,sodium ion transport|0006814||;locus_tag=GGE_1192;product=putative na+/H+ antiporter NhaC-like protein;protein_id=EGT81497.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36634 38113 . - . ID=id-GGE_1192;Note=multi-dom%3B label: NhaC;gbkey=misc_feature;locus_tag=GGE_1192 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36646 36661 . - . ID=id-GGE_1192-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1192 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 37108 37570 . - . ID=id-GGE_1192-3;Dbxref=InterPro:IPR018461,PFAM:PF03553;Note=superfamily~na_h_antiporter~na+/h+ antiporter nhac-like%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1192 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36643 37837 . + . ID=id-AFQR01000020.1:36643..37837;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36652 37504 . + . ID=id-AFQR01000020.1:36652..37504;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36652 36721 . + . ID=id-AFQR01000020.1:36652..36721;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36655 37321 . + . ID=id-AFQR01000020.1:36655..37321;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36655 36655 . + . ID=id-AFQR01000020.1:36655..36655;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36664 36847 . + . ID=id-AFQR01000020.1:36664..36847;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36670 37237 . + . ID=id-AFQR01000020.1:36670..37237;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36682 37297 . + . ID=id-AFQR01000020.1:36682..37297;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 38059 . + . ID=id-AFQR01000020.1:36685..38059;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37807 . + . ID=id-AFQR01000020.1:36685..37807;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37720 . + . ID=id-AFQR01000020.1:36685..37720;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37609 . + . ID=id-AFQR01000020.1:36685..37609;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37507 . + . ID=id-AFQR01000020.1:36685..37507;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37396 . + . ID=id-AFQR01000020.1:36685..37396;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37156 . + . ID=id-AFQR01000020.1:36685..37156;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 37075 . + . ID=id-AFQR01000020.1:36685..37075;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 36964 . + . ID=id-AFQR01000020.1:36685..36964;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 36838 . + . ID=id-AFQR01000020.1:36685..36838;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 36685 36703 . + . ID=id-AFQR01000020.1:36685..36703;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 37868 37877 . + . ID=id-AFQR01000020.1:37868..37877;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 38589 38993 . + . ID=gene-GGE_1193;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank CDS 38589 38993 . + 0 ID=cds-EGT81498.1;Parent=gene-GGE_1193;Dbxref=GeneID:1170327,InterPro:IPR001801,PFAM:PF00816,NCBI_GP:EGT81498.1;Name=EGT81498.1;Ontology_term=GO:0006355,GO:0005622,GO:0003677;gbkey=CDS;gene=hns;go_component=intracellular|0005622||;go_function=DNA binding|0003677||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1193;product=DNA-binding protein H-NS;protein_id=EGT81498.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38589 38991 . + . ID=id-GGE_1193;Note=multi-dom%3B label: PRK10328;gbkey=misc_feature;gene=hns;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38589 38985 . + . ID=id-GGE_1193-2;Note=superfamily%3B label: HNS superfamily;gbkey=misc_feature;gene=hns;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38595 38760 . + . ID=id-GGE_1193-3;Note=superfamily:SSF81273~h-ns histone-like proteins;gbkey=misc_feature;gene=hns;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38646 38742 . + . ID=id-GGE_1193-4;Note=coiled-coil;gbkey=misc_feature;gene=hns;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38685 38883 . + . ID=id-GGE_1193-5;Dbxref=InterPro:IPR001801,PFAM:PF00816;Note=histone_hns~histone-like nucleoid-structuring protein h-ns;gbkey=misc_feature;gene=hns;locus_tag=GGE_1193 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38718 38865 . - . ID=id-AFQR01000020.1:38718..38865;Note=Gene3D:4.10.430.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 38721 38862 . - . ID=id-AFQR01000020.1:38721..38862;Note=superfamily:SSF81273~h-ns histone-like proteins;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 39064 39900 . + . ID=gene-GGE_1194;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank CDS 39064 39900 . + 0 ID=cds-EGT81499.1;Parent=gene-GGE_1194;Dbxref=GeneID:1172771,InterPro:IPR002376,InterPro:IPR002912,InterPro:IPR004810,PFAM:PF00551,PFAM:PF01842,PIR:PIRSF036480,TIGRFAM:TIGR00655,NCBI_GP:EGT81499.1;Name=EGT81499.1;Ontology_term=GO:0006189,GO:0009058,GO:0008152,GO:0016597,GO:0008864,GO:0016742;gbkey=CDS;gene=purU;go_function=amino acid binding|0016597||,formyltetrahydrofolate deformylase activity|0008864||,hydroxymethyl- formyl- and related transferase activity|0016742||;go_process='de novo' IMP biosynthetic process|0006189||,biosynthetic process|0009058||,metabolic process|0008152||;locus_tag=GGE_1194;product=Formyltetrahydrofolate deformylase;protein_id=EGT81499.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39064 39898 . + . ID=id-GGE_1194;Dbxref=InterPro:IPR004810,PIR:PIRSF036480;Note=multi-dom~formyltetrahydrofolate deformylase~formyltetrahydrofolate deformylase%3B label: purU;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39070 39871 . + . ID=id-GGE_1194-2;Note=HMMPanther:PTHR10520:SF7~formyltetrahydrofolate deformylase~HMMPanther:PTHR10520~trifunctional purine biosynthetic protein adenosine-3-related;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39073 39256 . + . ID=id-GGE_1194-3;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39079 39886 . + . ID=id-GGE_1194-4;Dbxref=InterPro:IPR004810,TIGRFAM:TIGR00655;Note=puru: formyltetrahydrofolate deformylase~formyltetrahydrofolate deformylase;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39079 39259 . + . ID=id-GGE_1194-5;Note=Gene3D:3.30.70.260;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39082 39247 . + . ID=id-GGE_1194-6;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39082 39244 . + . ID=id-GGE_1194-7;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39085 39145 . + . ID=id-GGE_1194-8;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39313 39652 . + . ID=id-GGE_1194-9;Dbxref=InterPro:IPR002376;Note=specific~superfamily~superfamily:SSF53328~formyltransferase~formyl transferase%3B label: FMT_core superfamily;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39313 39649 . + . ID=id-GGE_1194-10;Dbxref=InterPro:IPR002376;Note=Gene3D:3.40.50.170~formyl transferase;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39313 39598 . + . ID=id-GGE_1194-11;Dbxref=InterPro:IPR002376,PFAM:PF00551;Note=formyl_trans_n~formyl transferase;gbkey=misc_feature;gene=purU;locus_tag=GGE_1194 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39103 39181 . - . ID=id-AFQR01000020.1:39103..39181;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39133 39754 . - . ID=id-AFQR01000020.1:39133..39754;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39133 39316 . - . ID=id-AFQR01000020.1:39133..39316;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39142 39820 . - . ID=id-AFQR01000020.1:39142..39820;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39148 39382 . - . ID=id-AFQR01000020.1:39148..39382;Dbxref=InterPro:IPR004810;Note=FPrintScan:PR01575~ffh4hydrlase~formyltetrahydrofolate deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 39900 41198 . + . ID=gene-GGE_1195;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank CDS 39900 41198 . + 0 ID=cds-EGT81500.1;Parent=gene-GGE_1195;Dbxref=GeneID:166217980,InterPro:IPR001986,InterPro:IPR006264,InterPro:IPR013792,InterPro:IPR023193,PFAM:PF00275,PIR:PIRSF000505,TIGRFAM:TIGR01356,NCBI_GP:EGT81500.1;Name=EGT81500.1;Ontology_term=GO:0003866,GO:0003824,GO:0016765;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||,catalytic activity|0003824||,transferase activity transferring alkyl or aryl (other than methyl) groups|0016765||;locus_tag=GGE_1195;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=EGT81500.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39900 41190 . + . ID=id-GGE_1195;Dbxref=InterPro:IPR006264,PIR:PIRSF000505;Note=3-phosphoshikimate 1-carboxyvinyltransferase~3-phosphoshikimate 1-carboxyvinyltransferase;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39900 41187 . + . ID=id-GGE_1195-2;Note=multi-dom%3B label: PRK02427;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39900 41184 . + . ID=id-GGE_1195-3;Dbxref=InterPro:IPR013792;Note=superfamily:SSF55205~ept/rtpc-like~rna 3'-terminal phosphate cyclase/enolpyruvate transferase%2C alpha/beta;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39918 41169 . + . ID=id-GGE_1195-4;Note=HMMPanther:PTHR21090:SF3~3-phosphoshikimate 1-carboxyvinyltransferase~HMMPanther:PTHR21090~family not named;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39921 41154 . + . ID=id-GGE_1195-5;Dbxref=InterPro:IPR001986,PFAM:PF00275;Note=epsp_synthase~enolpyruvate transferase domain;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39930 41166 . + . ID=id-GGE_1195-6;Dbxref=InterPro:IPR006264;Note=HAMAP:MF_00210~epsp_synth~3-phosphoshikimate 1-carboxyvinyltransferase;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39936 41151 . + . ID=id-GGE_1195-7;Note=specific~superfamily%3B label: EPSP_synthase;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39942 41154 . + . ID=id-GGE_1195-8;Dbxref=InterPro:IPR006264,TIGRFAM:TIGR01356;Note=aroa: 3-phosphoshikimate 1-carboxyvinyltrans~3-phosphoshikimate 1-carboxyvinyltransferase;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39966 40560 . + . ID=id-GGE_1195-9;Dbxref=InterPro:IPR001986;Note=Gene3D:3.65.10.10~enolpyruvate transferase domain;gbkey=misc_feature;gene=aroA;locus_tag=GGE_1195 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39939 39969 . - . ID=id-AFQR01000020.1:39939..39969;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39945 40668 . - . ID=id-AFQR01000020.1:39945..40668;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39945 40170 . - . ID=id-AFQR01000020.1:39945..40170;Dbxref=InterPro:IPR023193;Note=PatternScan:PS00104~epsp_synthase_1~3-phosphoshikimate 1-carboxyvinyltransferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 39957 40923 . - . ID=id-AFQR01000020.1:39957..40923;Dbxref=InterPro:IPR023193;Note=PatternScan:PS00885~epsp_synthase_2~3-phosphoshikimate 1-carboxyvinyltransferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 40458 40626 . - . ID=id-AFQR01000020.1:40458..40626;Dbxref=InterPro:IPR001986;Note=Gene3D:3.65.10.10~enolpyruvate transferase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41203 41212 . + . ID=id-AFQR01000020.1:41203..41212;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41239 41248 . - . ID=id-AFQR01000020.1:41239..41248;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 41282 42622 . - . ID=gene-GGE_1196;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank CDS 41282 42622 . - 0 ID=cds-EGT81501.1;Parent=gene-GGE_1196;Dbxref=GeneID:1175611,InterPro:IPR003959,InterPro:IPR021886,PFAM:PF00004,PFAM:PF12002,NCBI_GP:EGT81501.1;Name=EGT81501.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rarA;go_function=ATP binding|0005524||;locus_tag=GGE_1196;product=Replication-associated recombination protein A;protein_id=EGT81501.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41300 41999 . - . ID=id-GGE_1196;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41300 41309 . - . ID=id-GGE_1196-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41303 42593 . - . ID=id-GGE_1196-3;Note=HMMPanther:PTHR13779:SF12~subfamily not named~HMMPanther:PTHR13779~family not named;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41315 41738 . - . ID=id-GGE_1196-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41327 42554 . - . ID=id-GGE_1196-5;Note=multi-dom%3B label: PRK13342;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41369 41666 . - . ID=id-GGE_1196-6;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41441 41606 . - . ID=id-GGE_1196-7;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature;gene=rarA;locus_tag=GGE_1196 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41330 41828 . + . ID=id-AFQR01000020.1:41330..41828;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41576 42323 . + . ID=id-AFQR01000020.1:41576..42323;Note=Gene3D:1.10.3710.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41579 42026 . + . ID=id-AFQR01000020.1:41579..42026;Note=Gene3D:1.20.272.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41786 42083 . + . ID=id-AFQR01000020.1:41786..42083;Dbxref=InterPro:IPR021886,PFAM:PF12002;Note=mgsa_c~mgsa aaa+ atpase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41789 42083 . + . ID=id-AFQR01000020.1:41789..42083;Note=superfamily%3B label: MgsA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 41918 41927 . + . ID=id-AFQR01000020.1:41918..41927;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 42683 43300 . - . ID=gene-GGE_1197;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank CDS 42683 43300 . - 0 ID=cds-EGT81502.1;Parent=gene-GGE_1197;Dbxref=GeneID:1170807,InterPro:IPR004564,InterPro:IPR018323,PFAM:PF03548,TIGRFAM:TIGR00547,NCBI_GP:EGT81502.1;Name=EGT81502.1;Ontology_term=GO:0015031,GO:0030288;gbkey=CDS;gene=lolA;go_component=outer membrane-bounded periplasmic space|0030288||;go_process=protein transport|0015031||;locus_tag=GGE_1197;product=Outer-membrane lipoprotein carrier protein;protein_id=EGT81502.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42683 43295 . - . ID=id-GGE_1197;Dbxref=InterPro:IPR018323,TIGRFAM:TIGR00547;Note=lola: outer membrane lipoprotein carrier pro~outer membrane lipoprotein carrier protein lola%2C proteobacteria;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42689 42764 . - . ID=id-GGE_1197-2;Note=seg;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42710 43265 . - . ID=id-GGE_1197-3;Dbxref=InterPro:IPR018323;Note=HAMAP:MF_00240~lola~outer membrane lipoprotein carrier protein lola%2C proteobacteria;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42752 43229 . - . ID=id-GGE_1197-4;Note=superfamily:SSF89392~prokaryotic lipoproteins and lipoprotein localization factors;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42752 43226 . - . ID=id-GGE_1197-5;Note=Gene3D:2.50.20.10;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42770 43211 . - . ID=id-GGE_1197-6;Note=superfamily%3B label: LolA superfamily;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 42785 43160 . - . ID=id-GGE_1197-7;Dbxref=InterPro:IPR004564,PFAM:PF03548;Note=lola~outer membrane lipoprotein carrier protein lola;gbkey=misc_feature;gene=lolA;locus_tag=GGE_1197 GCA_000222085.2|AFQR01000020.1 Genbank gene 43324 46095 . - . ID=gene-GGE_1198;Name=GGE_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank CDS 43324 46095 . - 0 ID=cds-EGT81503.1;Parent=gene-GGE_1198;Dbxref=GeneID:229847089,InterPro:IPR002543,InterPro:IPR018541,PFAM:PF01580,PFAM:PF09397,NCBI_GP:EGT81503.1;Name=EGT81503.1;Note=ZP_04467194;Ontology_term=GO:0007049,GO:0051301,GO:0007059,GO:0016021,GO:0005524,GO:0003677,GO:0000166;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,DNA binding|0003677||,nucleotide binding|0000166||;go_process=cell cycle|0007049||,cell division|0051301||,chromosome segregation|0007059||;locus_tag=GGE_1198;product=outer-membrane lipoprotein carrier protein precursor;protein_id=EGT81503.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43363 43393 . - . ID=id-GGE_1198;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43366 43375 . - . ID=id-GGE_1198-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43417 45985 . - . ID=id-GGE_1198-3;Note=multi-dom%3B label: FtsK;gbkey=misc_feature;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43663 43975 . - . ID=id-GGE_1198-4;Note=BlastProDom:PD414759~q4ql24_haei8_q4ql24;gbkey=misc_feature;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 44587 44830 . - . ID=id-GGE_1198-5;Note=HMMPanther:PTHR22683:SF1~dna translocase ftsk~HMMPanther:PTHR22683~family not named;gbkey=misc_feature;locus_tag=GGE_1198 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43360 44614 . + . ID=id-AFQR01000020.1:43360..44614;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43360 43723 . + . ID=id-AFQR01000020.1:43360..43723;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43372 43894 . + . ID=id-AFQR01000020.1:43372..43894;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43390 43891 . + . ID=id-AFQR01000020.1:43390..43891;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43393 43801 . + . ID=id-AFQR01000020.1:43393..43801;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43393 43714 . + . ID=id-AFQR01000020.1:43393..43714;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43393 43636 . + . ID=id-AFQR01000020.1:43393..43636;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43393 43531 . + . ID=id-AFQR01000020.1:43393..43531;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43507 45898 . + . ID=id-AFQR01000020.1:43507..45898;Dbxref=InterPro:IPR018541,PFAM:PF09397;Note=ftsk_gamma~dna translocase ftsk gamma;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43522 45892 . + . ID=id-AFQR01000020.1:43522..45892;Note=superfamily%3B label: Ftsk_gamma superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43528 45892 . + . ID=id-AFQR01000020.1:43528..45892;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43966 45028 . + . ID=id-AFQR01000020.1:43966..45028;Dbxref=InterPro:IPR002543;Note=ProfileScan:PS50901~ftsk~cell divisionftsk/spoiiie;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 43966 44950 . + . ID=id-AFQR01000020.1:43966..44950;Dbxref=InterPro:IPR002543,PFAM:PF01580;Note=superfamily~ftsk_spoiiie~cell divisionftsk/spoiiie%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 44257 44869 . + . ID=id-AFQR01000020.1:44257..44869;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 44275 44863 . + . ID=id-AFQR01000020.1:44275..44863;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 46097 46576 . - . ID=gene-GGE_1199;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank CDS 46097 46576 . - 0 ID=cds-EGT81504.1;Parent=gene-GGE_1199;Dbxref=GeneID:1170831,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019885,InterPro:IPR019887,PFAM:PF01037,NCBI_GP:EGT81504.1;Name=EGT81504.1;Ontology_term=GO:0006355,GO:0005622,GO:0043565,GO:0003700;gbkey=CDS;gene=lrp;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1199;product=Leucine-responsive regulatory protein;protein_id=EGT81504.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46097 46574 . - . ID=id-GGE_1199;Note=multi-dom%3B label: PRK11169;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46118 46286 . - . ID=id-GGE_1199-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46124 46427 . - . ID=id-GGE_1199-3;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46124 46325 . - . ID=id-GGE_1199-4;Dbxref=InterPro:IPR000485;Note=ProfileScan:PS50956~hth_asnc_2~transcription regulator hth%2C asnc-type;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46124 46148 . - . ID=id-GGE_1199-5;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46127 46253 . - . ID=id-GGE_1199-6;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46283 46382 . - . ID=id-GGE_1199-7;Dbxref=InterPro:IPR019887;Note=Gene3D:3.30.70.920~transcription regulator asnc-type;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46307 46358 . - . ID=id-GGE_1199-8;Dbxref=InterPro:IPR011008;Note=superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel;gbkey=misc_feature;gene=lrp;locus_tag=GGE_1199 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46133 46172 . + . ID=id-AFQR01000020.1:46133..46172;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46136 46277 . + . ID=id-AFQR01000020.1:46136..46277;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46157 46205 . + . ID=id-AFQR01000020.1:46157..46205;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46178 46178 . + . ID=id-AFQR01000020.1:46178..46178;Dbxref=InterPro:IPR019885;Note=PatternScan:PS00519~hth_asnc_1~transcription regulator hth%2C asnc-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46322 46322 . + . ID=id-AFQR01000020.1:46322..46322;Dbxref=InterPro:IPR019887,PFAM:PF01037;Note=asnc_trans_reg~transcription regulator asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 46699 48075 . - . ID=gene-GGE_1200;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank CDS 46699 48075 . - 0 ID=cds-EGT81505.1;Parent=gene-GGE_1200;Dbxref=GeneID:1173465,InterPro:IPR004504,InterPro:IPR008269,InterPro:IPR014774,InterPro:IPR020568,PFAM:PF05362,PFAM:PF06745,TIGRFAM:TIGR00416,NCBI_GP:EGT81505.1;Name=EGT81505.1;Ontology_term=GO:0006281,GO:0006508,GO:0005524,GO:0004176,GO:0003684,GO:0004252;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||,ATP-dependent peptidase activity|0004176||,damaged DNA binding|0003684||,serine-type endopeptidase activity|0004252||;go_process=DNA repair|0006281||,proteolysis|0006508||;locus_tag=GGE_1200;product=DNA repair protein radA;protein_id=EGT81505.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46699 48055 . - . ID=id-GGE_1200;Dbxref=InterPro:IPR004504,TIGRFAM:TIGR00416;Note=multi-dom~sms: dna repair protein rada~dna repair protein rada%3B label: sms;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46717 48058 . - . ID=id-GGE_1200-2;Note=HMMPanther:PTHR13682:SF11~subfamily not named~HMMPanther:PTHR13682~family not named;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46726 47791 . - . ID=id-GGE_1200-3;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46732 46774 . - . ID=id-GGE_1200-4;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46765 46774 . - . ID=id-GGE_1200-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46879 47359 . - . ID=id-GGE_1200-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46885 47341 . - . ID=id-GGE_1200-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=radA;locus_tag=GGE_1200 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46729 47818 . + . ID=id-AFQR01000020.1:46729..47818;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46732 47767 . + . ID=id-AFQR01000020.1:46732..47767;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46744 47704 . + . ID=id-AFQR01000020.1:46744..47704;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46753 47074 . + . ID=id-AFQR01000020.1:46753..47074;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46771 47668 . + . ID=id-AFQR01000020.1:46771..47668;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46774 47224 . + . ID=id-AFQR01000020.1:46774..47224;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46780 47446 . + . ID=id-AFQR01000020.1:46780..47446;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46786 47341 . + . ID=id-AFQR01000020.1:46786..47341;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46786 46951 . + . ID=id-AFQR01000020.1:46786..46951;Dbxref=InterPro:IPR004504;Note=FPrintScan:PR01874~dnarepairada~dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46906 46927 . + . ID=id-AFQR01000020.1:46906..46927;Dbxref=InterPro:IPR014774,PFAM:PF06745;Note=kaic~circadian clock protein kaic/dna repair protein rada;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 46999 47761 . + . ID=id-AFQR01000020.1:46999..47761;Dbxref=InterPro:IPR008269,PFAM:PF05362;Note=lon_c~peptidase s16%2C lon c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 47308 47467 . + . ID=id-AFQR01000020.1:47308..47467;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 47702 47711 . + . ID=id-AFQR01000020.1:47702..47711;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 48201 49238 . - . ID=gene-GGE_1201;Name=GGE_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank CDS 48201 49238 . - 0 ID=cds-EGT81506.1;Parent=gene-GGE_1201;Dbxref=GeneID:1176104,InterPro:IPR008172,InterPro:IPR023577,PFAM:PF01928,NCBI_GP:EGT81506.1;Name=EGT81506.1;Note=HI_1598;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;go_function=adenylate cyclase activity|0004016||;go_process=cAMP biosynthetic process|0006171||;locus_tag=GGE_1201;product=putative adenylate cyclase;protein_id=EGT81506.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48201 48798 . - . ID=id-GGE_1201;Dbxref=InterPro:IPR008172;Note=Gene3D:2.40.320.10~adenylate cyclase;gbkey=misc_feature;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48207 48795 . - . ID=id-GGE_1201-2;Dbxref=InterPro:IPR023577;Note=superfamily:SSF55154~cyth-like phosphatases~cyth-like phosphatase domain;gbkey=misc_feature;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48210 48783 . - . ID=id-GGE_1201-3;Dbxref=InterPro:IPR008172,PFAM:PF01928;Note=cyth~adenylate cyclase;gbkey=misc_feature;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48213 48777 . - . ID=id-GGE_1201-4;Note=specific~superfamily%3B label: CYTH-like_Pase superfamily;gbkey=misc_feature;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48576 48585 . - . ID=id-GGE_1201-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1201 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48256 48265 . + . ID=id-AFQR01000020.1:48256..48265;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 48864 48873 . + . ID=id-AFQR01000020.1:48864..48873;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 49637 50353 . - . ID=gene-GGE_1202;Name=GGE_1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1202 GCA_000222085.2|AFQR01000020.1 Genbank CDS 49637 50353 . - 0 ID=cds-EGT81507.1;Parent=gene-GGE_1202;Dbxref=GeneID:301155901,InterPro:IPR018640,PFAM:PF09836,NCBI_GP:EGT81507.1;Name=EGT81507.1;Note=CBW15370;gbkey=CDS;locus_tag=GGE_1202;product=Hypothetical protein;protein_id=EGT81507.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 49649 50333 . - . ID=id-GGE_1202;Note=superfamily%3B label: DUF2063 superfamily;gbkey=misc_feature;locus_tag=GGE_1202 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 49664 49898 . - . ID=id-GGE_1202-2;Dbxref=InterPro:IPR018640,PFAM:PF09836;Note=duf2063~protein of unknown function duf2063;gbkey=misc_feature;locus_tag=GGE_1202 GCA_000222085.2|AFQR01000020.1 Genbank gene 50343 51263 . - . ID=gene-GGE_1203;Name=GGE_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank CDS 50343 51263 . - 0 ID=cds-EGT81508.1;Parent=gene-GGE_1203;Dbxref=GeneID:34223727,InterPro:IPR007801,InterPro:IPR013022,PFAM:PF05114,NCBI_GP:EGT81508.1;Name=EGT81508.1;Note=HI_1600;gbkey=CDS;locus_tag=GGE_1203;product=UPF0276 protein;protein_id=EGT81508.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50343 51258 . - . ID=id-GGE_1203;Note=multi-dom%3B label: PRK05409;gbkey=misc_feature;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50343 51234 . - . ID=id-GGE_1203-2;Dbxref=InterPro:IPR007801,PFAM:PF05114;Note=duf692~uncharacterised protein family upf0276;gbkey=misc_feature;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50343 51228 . - . ID=id-GGE_1203-3;Note=superfamily%3B label: DUF692 superfamily;gbkey=misc_feature;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50352 51045 . - . ID=id-GGE_1203-4;Dbxref=InterPro:IPR013022;Note=superfamily:SSF51658~xylose isomerase-like~xylose isomerase-like%2C tim barrel domain;gbkey=misc_feature;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50358 51234 . - . ID=id-GGE_1203-5;Dbxref=InterPro:IPR007801;Note=HAMAP:MF_00697~upf0276~uncharacterised protein family upf0276;gbkey=misc_feature;locus_tag=GGE_1203 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 50496 51093 . + . ID=id-AFQR01000020.1:50496..51093;Dbxref=InterPro:IPR013022;Note=Gene3D:3.20.20.150~xylose isomerase-like%2C tim barrel domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 51341 51577 . - . ID=gene-GGE_1204;Name=GGE_1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1204 GCA_000222085.2|AFQR01000020.1 Genbank CDS 51341 51577 . - 0 ID=cds-EGT81509.1;Parent=gene-GGE_1204;Dbxref=GeneID:251792775,NCBI_GP:EGT81509.1;Name=EGT81509.1;Note=YP_003007501;gbkey=CDS;locus_tag=GGE_1204;product=outer membrane lipoprotein LolB;protein_id=EGT81509.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51353 51398 . - . ID=id-GGE_1204;Note=seg;gbkey=misc_feature;locus_tag=GGE_1204 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51386 51533 . + . ID=id-AFQR01000020.1:51386..51533;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 51612 52052 . - . ID=gene-GGE_1205;Name=GGE_1205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1205 GCA_000222085.2|AFQR01000020.1 Genbank CDS 51612 52052 . - 0 ID=cds-EGT81510.1;Parent=gene-GGE_1205;Dbxref=GeneID:1176035,InterPro:IPR011637,PFAM:PF07681,NCBI_GP:EGT81510.1;Name=EGT81510.1;Note=HI_1602;gbkey=CDS;locus_tag=GGE_1205;product=putative Hypothetical protein family YphA;protein_id=EGT81510.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51612 52026 . - . ID=id-GGE_1205;Note=superfamily%3B label: DoxX superfamily;gbkey=misc_feature;locus_tag=GGE_1205 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51642 51867 . - . ID=id-GGE_1205-2;Dbxref=InterPro:IPR011637,PFAM:PF07681;Note=doxx~uncharacterised protein family ypha;gbkey=misc_feature;locus_tag=GGE_1205 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51654 51936 . + . ID=id-AFQR01000020.1:51654..51936;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51666 51936 . + . ID=id-AFQR01000020.1:51666..51936;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 51681 51831 . + . ID=id-AFQR01000020.1:51681..51831;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 52271 52951 . + . ID=gene-GGE_1206;Name=GGE_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1206 GCA_000222085.2|AFQR01000020.1 Genbank CDS 52271 52951 . + 0 ID=cds-EGT81511.1;Parent=gene-GGE_1206;Dbxref=GeneID:1176036,InterPro:IPR002727,InterPro:IPR018445,PFAM:PF01865,TIGRFAM:TIGR00153,NCBI_GP:EGT81511.1;Name=EGT81511.1;Note=HI_1603;gbkey=CDS;locus_tag=GGE_1206;product=UPF0111 protein;protein_id=EGT81511.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52277 52946 . + . ID=id-GGE_1206;Dbxref=InterPro:IPR002727,TIGRFAM:TIGR00153;Note=multi-dom~tigr00153: conserved hypothetical protein t~protein of unknown function duf47%3B label: TIGR00153;gbkey=misc_feature;locus_tag=GGE_1206 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52292 52925 . + . ID=id-GGE_1206-2;Dbxref=InterPro:IPR018445,PFAM:PF01865;Note=phou_div~putitive phosphate transport regulator;gbkey=misc_feature;locus_tag=GGE_1206 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52304 52907 . + . ID=id-GGE_1206-3;Note=superfamily:SSF109755~phou-like;gbkey=misc_feature;locus_tag=GGE_1206 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52337 52745 . - . ID=id-AFQR01000020.1:52337..52745;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52337 52412 . - . ID=id-AFQR01000020.1:52337..52412;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 52976 54238 . + . ID=gene-GGE_1207;Name=GGE_1207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1207 GCA_000222085.2|AFQR01000020.1 Genbank CDS 52976 54238 . + 0 ID=cds-EGT81512.1;Parent=gene-GGE_1207;Dbxref=GeneID:1176037,InterPro:IPR001204,PFAM:PF01384,NCBI_GP:EGT81512.1;Name=EGT81512.1;Note=HI_1604;Ontology_term=GO:0006817,GO:0016020,GO:0005315;gbkey=CDS;go_component=membrane|0016020||;go_function=inorganic phosphate transmembrane transporter activity|0005315||;go_process=phosphate transport|0006817||;locus_tag=GGE_1207;product=Putative phosphate permease;protein_id=EGT81512.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52976 54236 . + . ID=id-GGE_1207;Dbxref=InterPro:IPR001204;Note=HMMPanther:PTHR11101:SF31~probable phosphate transporter~HMMPanther:PTHR11101~family not named~phosphate transporter;gbkey=misc_feature;locus_tag=GGE_1207 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 52997 53045 . + . ID=id-GGE_1207-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1207 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53054 54125 . + . ID=id-GGE_1207-3;Dbxref=InterPro:IPR001204,PFAM:PF01384;Note=pho4~phosphate transporter;gbkey=misc_feature;locus_tag=GGE_1207 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53063 53441 . + . ID=id-GGE_1207-4;Note=superfamily%3B label: PHO4 superfamily;gbkey=misc_feature;locus_tag=GGE_1207 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53015 53024 . - . ID=id-AFQR01000020.1:53015..53024;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53030 53336 . - . ID=id-AFQR01000020.1:53030..53336;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53033 53528 . - . ID=id-AFQR01000020.1:53033..53528;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53036 53882 . - . ID=id-AFQR01000020.1:53036..53882;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53036 53627 . - . ID=id-AFQR01000020.1:53036..53627;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53036 53240 . - . ID=id-AFQR01000020.1:53036..53240;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53045 54167 . - . ID=id-AFQR01000020.1:53045..54167;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53045 54080 . - . ID=id-AFQR01000020.1:53045..54080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53045 54002 . - . ID=id-AFQR01000020.1:53045..54002;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53045 53723 . - . ID=id-AFQR01000020.1:53045..53723;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53045 53402 . - . ID=id-AFQR01000020.1:53045..53402;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 53549 53630 . - . ID=id-AFQR01000020.1:53549..53630;Note=superfamily%3B label: PHO4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54251 54260 . + . ID=id-AFQR01000020.1:54251..54260;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 54306 54917 . + . ID=gene-GGE_1208;Name=GGE_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1208 GCA_000222085.2|AFQR01000020.1 Genbank CDS 54306 54917 . + 0 ID=cds-EGT81513.1;Parent=gene-GGE_1208;Dbxref=GeneID:1176108,InterPro:IPR013247,InterPro:IPR016476,PFAM:PF08239,PIR:PIRSF006158,NCBI_GP:EGT81513.1;Name=EGT81513.1;Note=HI_1605;gbkey=CDS;locus_tag=GGE_1208;product=putative sH3%2C type 3;protein_id=EGT81513.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54306 54915 . + . ID=id-GGE_1208;Dbxref=InterPro:IPR016476,PIR:PIRSF006158;Note=multi-dom~sh3 domain protein%2C ygim type~uncharacterised conserved protein ucp006158%2C sh3%2C ygim%3B label: COG3103;gbkey=misc_feature;locus_tag=GGE_1208 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54375 54498 . + . ID=id-GGE_1208-2;Note=superfamily%3B label: SH3_3 superfamily;gbkey=misc_feature;locus_tag=GGE_1208 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54414 54447 . + . ID=id-GGE_1208-3;Dbxref=InterPro:IPR013247,PFAM:PF08239;Note=sh3_3~sh3%2C type 3;gbkey=misc_feature;locus_tag=GGE_1208 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54348 54831 . - . ID=id-AFQR01000020.1:54348..54831;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54375 54807 . - . ID=id-AFQR01000020.1:54375..54807;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54453 54663 . - . ID=id-AFQR01000020.1:54453..54663;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 54924 56174 . + . ID=gene-GGE_1209;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank CDS 54924 56174 . + 0 ID=cds-EGT81514.1;Parent=gene-GGE_1209;Dbxref=GeneID:1168822,InterPro:IPR002646,InterPro:IPR006674,InterPro:IPR012006,PFAM:PF01743,PFAM:PF01966,PIR:PIRSF000813,NCBI_GP:EGT81514.1;Name=EGT81514.1;Ontology_term=GO:0006396,GO:0001680,GO:0005524,GO:0003723,GO:0016779,GO:0004810;gbkey=CDS;gene=cca;go_function=ATP binding|0005524||,RNA binding|0003723||,nucleotidyltransferase activity|0016779||,tRNA adenylyltransferase activity|0004810||;go_process=RNA processing|0006396||,tRNA 3'-terminal CCA addition|0001680||;locus_tag=GGE_1209;product=putative tRNA nucleotidyltransferase-like protein;protein_id=EGT81514.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 56166 . + . ID=id-GGE_1209;Dbxref=InterPro:IPR012006,PIR:PIRSF000813;Note=trna nucleotidyltransferase (cca-adding enzyme)%2C proteobacteria type~trna nucleotidyltransferase%2C proteobacteria;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 56163 . + . ID=id-GGE_1209-2;Dbxref=InterPro:IPR012006;Note=multi-dom~HAMAP:MF_01261~cca_bact_type1~trna nucleotidyltransferase%2C proteobacteria%3B label: cca;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 56145 . + . ID=id-GGE_1209-3;Dbxref=InterPro:IPR012006;Note=HAMAP:MF_01262~cca_bact_type2~trna nucleotidyltransferase%2C proteobacteria;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 56031 . + . ID=id-GGE_1209-4;Note=HMMPanther:PTHR13734:SF6~gb def: trna nucleotidyltransferase (ec 2.7.7.25) (trna adenylyltransferase) (trna cca-p~HMMPanther:PTHR13734~family not named;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 55281 . + . ID=id-GGE_1209-5;Note=superfamily:SSF81301~nucleotidyltransferase~Gene3D:3.30.460.10;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54924 55278 . + . ID=id-GGE_1209-6;Note=specific~superfamily%3B label: NT_ClassII-CCAase;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54933 55284 . + . ID=id-GGE_1209-7;Dbxref=InterPro:IPR002646,PFAM:PF01743;Note=polya_pol~poly a polymerase%2C head domain;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 55284 55674 . + . ID=id-GGE_1209-8;Note=superfamily:SSF81891~poly a polymerase c-terminal region-like;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 55284 55662 . + . ID=id-GGE_1209-9;Note=Gene3D:1.10.3090.10;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 55674 55683 . + . ID=id-GGE_1209-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cca;locus_tag=GGE_1209 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 54960 55323 . - . ID=id-AFQR01000020.1:54960..55323;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 55185 55611 . - . ID=id-AFQR01000020.1:55185..55611;Dbxref=InterPro:IPR006674,PFAM:PF01966;Note=hd~metal-dependent phosphohydrolase%2C hd subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 55218 55611 . - . ID=id-AFQR01000020.1:55218..55611;Note=superfamily%3B label: HDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 56237 56866 . + . ID=gene-GGE_1210;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank CDS 56237 56866 . + 0 ID=cds-EGT81515.1;Parent=gene-GGE_1210;Dbxref=GeneID:1170232,InterPro:IPR004565,PFAM:PF03550,TIGRFAM:TIGR00548,NCBI_GP:EGT81515.1;Name=EGT81515.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||;go_process=protein transport|0015031||;locus_tag=GGE_1210;product=Outer-membrane lipoprotein lolB;protein_id=EGT81515.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56237 56303 . + . ID=id-GGE_1210;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56252 56852 . + . ID=id-GGE_1210-2;Dbxref=InterPro:IPR004565;Note=HAMAP:MF_00233~lolb~outer membrane lipoprotein lolb;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56255 56849 . + . ID=id-GGE_1210-3;Dbxref=InterPro:IPR004565,TIGRFAM:TIGR00548;Note=multi-dom~lolb: outer membrane lipoprotein lolb~outer membrane lipoprotein lolb%3B label: lolB;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56282 56819 . + . ID=id-GGE_1210-4;Note=Gene3D:2.50.20.10;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56300 56804 . + . ID=id-GGE_1210-5;Note=superfamily:SSF89392~prokaryotic lipoproteins and lipoprotein localization factors;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56390 56702 . + . ID=id-GGE_1210-6;Note=superfamily%3B label: LolB superfamily;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56393 56705 . + . ID=id-GGE_1210-7;Dbxref=InterPro:IPR004565,PFAM:PF03550;Note=lolb~outer membrane lipoprotein lolb;gbkey=misc_feature;gene=lolB;locus_tag=GGE_1210 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56266 56275 . - . ID=id-AFQR01000020.1:56266..56275;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 56866 57819 . + . ID=gene-GGE_1211;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank CDS 56866 57819 . + 0 ID=cds-EGT81516.1;Parent=gene-GGE_1211;Dbxref=GeneID:97053120,InterPro:IPR004424,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,PFAM:PF00288,PFAM:PF08544,PIR:PIRSF010376,TIGRFAM:TIGR00154,NCBI_GP:EGT81516.1;Name=EGT81516.1;Ontology_term=GO:0016310,GO:0016114,GO:0050515,GO:0005524,GO:0016301;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||,ATP binding|0005524||,kinase activity|0016301||;go_process=phosphorylation|0016310||,terpenoid biosynthetic process|0016114||;locus_tag=GGE_1211;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=EGT81516.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56929 57679 . + . ID=id-GGE_1211;Note=multi-dom%3B label: ipk;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56935 57706 . + . ID=id-GGE_1211-2;Dbxref=InterPro:IPR004424,TIGRFAM:TIGR00154;Note=ispe: 4-(cytidine 5'-diphospho)-2-c-methyl-d~4-diphosphocytidyl-2c-methyl-d-erythritol kinase;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56938 57694 . + . ID=id-GGE_1211-3;Dbxref=InterPro:IPR004424,PIR:PIRSF010376;Note=4-diphosphocytidyl-2c-methyl-d-erythritol 2-phosphate synthase~4-diphosphocytidyl-2c-methyl-d-erythritol kinase;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56938 57340 . + . ID=id-GGE_1211-4;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56944 57682 . + . ID=id-GGE_1211-5;Dbxref=InterPro:IPR004424;Note=HMMPanther:PTHR20861:SF2~4-diphosphocytidyl-2-c-methyl-d-erythritol kinase~4-diphosphocytidyl-2c-methyl-d-erythritol kinase~HMMPanther:PTHR20861~family not named;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56944 57670 . + . ID=id-GGE_1211-6;Dbxref=InterPro:IPR004424;Note=HAMAP:MF_00061~ispe~4-diphosphocytidyl-2c-methyl-d-erythritol kinase;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56947 57328 . + . ID=id-GGE_1211-7;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature;gene=ispE;locus_tag=GGE_1211 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56887 57223 . - . ID=id-AFQR01000020.1:56887..57223;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56898 56907 . - . ID=id-AFQR01000020.1:56898..56907;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 56902 57361 . - . ID=id-AFQR01000020.1:56902..57361;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57025 57544 . - . ID=id-AFQR01000020.1:57025..57544;Dbxref=InterPro:IPR013750,PFAM:PF08544;Note=ghmp_kinases_c~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57031 57196 . - . ID=id-AFQR01000020.1:57031..57196;Note=superfamily%3B label: GHMP_kinases_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57037 57196 . - . ID=id-AFQR01000020.1:57037..57196;Dbxref=InterPro:IPR006204,PFAM:PF00288;Note=ghmp_kinases_n~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57058 57511 . - . ID=id-AFQR01000020.1:57058..57511;Note=superfamily%3B label: GHMP_kinases_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57226 57412 . - . ID=id-AFQR01000020.1:57226..57412;Note=superfamily:SSF55060~ghmp kinase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 57821 58768 . + . ID=gene-GGE_1212;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank CDS 57821 58768 . + 0 ID=cds-EGT81517.1;Parent=gene-GGE_1212;Dbxref=GeneID:1170693,InterPro:IPR000836,InterPro:IPR000842,InterPro:IPR005946,PFAM:PF00156,TIGRFAM:TIGR01251,NCBI_GP:EGT81517.1;Name=EGT81517.1;Ontology_term=GO:0044249,GO:0009116,GO:0009165,GO:0009156,GO:0000287,GO:0004749;gbkey=CDS;gene=prs;go_function=magnesium ion binding|0000287||,ribose phosphate diphosphokinase activity|0004749||;go_process=cellular biosynthetic process|0044249||,nucleoside metabolic process|0009116||,nucleotide biosynthetic process|0009165||,ribonucleoside monophosphate biosynthetic process|0009156||;locus_tag=GGE_1212;product=Ribose-phosphate pyrophosphokinase;protein_id=EGT81517.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57821 58766 . + . ID=id-GGE_1212;Note=HMMPanther:PTHR10210~ribose-phosphate pyrophosphokinase;gbkey=misc_feature;gene=prs;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57821 58301 . + . ID=id-GGE_1212-2;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=prs;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57827 58760 . + . ID=id-GGE_1212-3;Note=multi-dom%3B label: PRK04923;gbkey=misc_feature;gene=prs;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57833 58757 . + . ID=id-GGE_1212-4;Dbxref=InterPro:IPR005946,TIGRFAM:TIGR01251;Note=superfamily~ribp_ppkin: ribose-phosphate diphosphokina~ribose-phosphate diphosphokinase%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=prs;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58028 58541 . + . ID=id-GGE_1212-5;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=prs;locus_tag=GGE_1212 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 57869 58208 . - . ID=id-AFQR01000020.1:57869..58208;Dbxref=InterPro:IPR000842;Note=PatternScan:PS00114~prpp_synthase~phosphoribosyl pyrophosphate synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58088 58292 . - . ID=id-AFQR01000020.1:58088..58292;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58205 58304 . - . ID=id-AFQR01000020.1:58205..58304;Note=Gene3D:3.40.50.2020;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 58897 59361 . - . ID=gene-GGE_1213;Name=GGE_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1213 GCA_000222085.2|AFQR01000020.1 Genbank CDS 58897 59361 . - 0 ID=cds-EGT81518.1;Parent=gene-GGE_1213;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT81518.1;Name=EGT81518.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_1213;product=transposase like protein;protein_id=EGT81518.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58912 59290 . - . ID=id-GGE_1213;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1213 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58915 59290 . - . ID=id-GGE_1213-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1213 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58942 59254 . - . ID=id-GGE_1213-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_1213 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 58945 59251 . - . ID=id-GGE_1213-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_1213 GCA_000222085.2|AFQR01000020.1 Genbank gene 59535 59810 . - . ID=gene-GGE_1214;Name=GGE_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank CDS 59535 59810 . - 0 ID=cds-EGT81519.1;Parent=gene-GGE_1214;Dbxref=GeneID:315634309,InterPro:IPR001109,InterPro:IPR019812,PFAM:PF01455,TIGRFAM:TIGR00074,NCBI_GP:EGT81519.1;Name=EGT81519.1;Note=ZP_07889596;gbkey=CDS;locus_tag=GGE_1214;product=hydrogenase 2 accessory protein HypG;protein_id=EGT81519.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59535 59793 . - . ID=id-GGE_1214;Dbxref=InterPro:IPR001109,TIGRFAM:TIGR00074;Note=hypc_hupf: hydrogenase assembly chaperone h~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59535 59790 . - . ID=id-GGE_1214-2;Note=superfamily%3B label: HupF_HypC superfamily;gbkey=misc_feature;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59535 59751 . - . ID=id-GGE_1214-3;Dbxref=InterPro:IPR001109,PFAM:PF01455;Note=hupf_hypc~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59535 59562 . - . ID=id-GGE_1214-4;Dbxref=InterPro:IPR019812;Note=PatternScan:PS01097~hupf_hypc~hydrogenase assembly chaperone%2C conserved site;gbkey=misc_feature;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59541 59559 . - . ID=id-GGE_1214-5;Dbxref=InterPro:IPR001109;Note=FPrintScan:PR00445~hupfhypc~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature;locus_tag=GGE_1214 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59574 59724 . + . ID=id-AFQR01000020.1:59574..59724;Dbxref=InterPro:IPR001109;Note=FPrintScan:PR00445~hupfhypc~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59586 59670 . + . ID=id-AFQR01000020.1:59586..59670;Dbxref=InterPro:IPR001109;Note=FPrintScan:PR00445~hupfhypc~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59586 59595 . + . ID=id-AFQR01000020.1:59586..59595;Dbxref=InterPro:IPR001109;Note=FPrintScan:PR00445~hupfhypc~hydrogenase expression/formation protein%2C hupf/hypc;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 59840 60349 . - . ID=gene-GGE_1215;Name=GGE_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1215 GCA_000222085.2|AFQR01000020.1 Genbank CDS 59840 60349 . - 0 ID=cds-EGT81520.1;Parent=gene-GGE_1215;Dbxref=GeneID:301155287,PFAM:PF11939,NCBI_GP:EGT81520.1;Name=EGT81520.1;Note=CBW14753;gbkey=CDS;locus_tag=GGE_1215;product=hydrogenase 2-specific chaperone;protein_id=EGT81520.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59894 60296 . - . ID=id-GGE_1215;Note=superfamily%3B label: DUF3457 superfamily;gbkey=misc_feature;locus_tag=GGE_1215 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59912 60269 . - . ID=id-GGE_1215-2;Dbxref=PFAM:PF11939;Note=duf3457;gbkey=misc_feature;locus_tag=GGE_1215 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 59948 60227 . - . ID=id-GGE_1215-3;Note=BlastProDom:PD008308~q65pz4_mansm_q65pz4;gbkey=misc_feature;locus_tag=GGE_1215 GCA_000222085.2|AFQR01000020.1 Genbank gene 60440 60913 . - . ID=gene-GGE_1216;Name=GGE_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank CDS 60440 60913 . - 0 ID=cds-EGT81521.1;Parent=gene-GGE_1216;Dbxref=GeneID:301155288,InterPro:IPR000671,InterPro:IPR023430,PFAM:PF01750,TIGRFAM:TIGR00072,NCBI_GP:EGT81521.1;Name=EGT81521.1;Note=CBW14754;Ontology_term=GO:0008047,GO:0008233;gbkey=CDS;go_function=enzyme activator activity|0008047||,peptidase activity|0008233||;locus_tag=GGE_1216;product=Putative maturation element for hydrogenase 2;protein_id=EGT81521.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60440 60908 . - . ID=id-GGE_1216;Dbxref=InterPro:IPR023430;Note=superfamily:SSF53163~hybd-like~Gene3D:3.40.50.1450~peptidase hybd-like domain;gbkey=misc_feature;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60449 60479 . - . ID=id-GGE_1216-2;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60452 60887 . - . ID=id-GGE_1216-3;Note=multi-dom%3B label: frhD;gbkey=misc_feature;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60452 60875 . - . ID=id-GGE_1216-4;Dbxref=InterPro:IPR000671,TIGRFAM:TIGR00072;Note=specific~superfamily~hydrog_prot: hydrogenase maturation prote~peptidase a31%2C hydrogen uptake protein%3B label: H2MP superfamily;gbkey=misc_feature;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60500 60815 . - . ID=id-GGE_1216-5;Dbxref=InterPro:IPR000671,PFAM:PF01750;Note=hyci~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature;locus_tag=GGE_1216 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60473 60608 . + . ID=id-AFQR01000020.1:60473..60608;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60476 60485 . + . ID=id-AFQR01000020.1:60476..60485;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60491 60641 . + . ID=id-AFQR01000020.1:60491..60641;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60494 60545 . + . ID=id-AFQR01000020.1:60494..60545;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60805 60814 . + . ID=id-AFQR01000020.1:60805..60814;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 60913 62622 . - . ID=gene-GGE_1217;Name=GGE_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank CDS 60913 62622 . - 0 ID=cds-EGT81522.1;Parent=gene-GGE_1217;Dbxref=GeneID:315634306,InterPro:IPR001501,InterPro:IPR018194,PFAM:PF00374,NCBI_GP:EGT81522.1;Name=EGT81522.1;Note=ZP_07889593;Ontology_term=GO:0055114,GO:0008901,GO:0016151;gbkey=CDS;go_function=ferredoxin hydrogenase activity|0008901||,nickel ion binding|0016151||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1217;product=hydrogenase-2 large chain;protein_id=EGT81522.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60913 62575 . - . ID=id-GGE_1217;Note=superfamily:SSF56762~hydb/nqo4-like;gbkey=misc_feature;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60922 62614 . - . ID=id-GGE_1217-2;Note=superfamily%3B label: Complex1_49kDa superfamily;gbkey=misc_feature;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60922 62569 . - . ID=id-GGE_1217-3;Note=Gene3D:1.10.645.10;gbkey=misc_feature;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60928 62608 . - . ID=id-GGE_1217-4;Note=HMMPanther:PTHR11993:SF11~subfamily not named~HMMPanther:PTHR11993~family not named;gbkey=misc_feature;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 61036 62455 . - . ID=id-GGE_1217-5;Dbxref=InterPro:IPR001501,PFAM:PF00374;Note=nifese_hases~nickel-dependent hydrogenase%2C large subunit;gbkey=misc_feature;locus_tag=GGE_1217 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60943 62548 . + . ID=id-AFQR01000020.1:60943..62548;Dbxref=InterPro:IPR018194;Note=PatternScan:PS00508~ni_hgenase_l_2~nickel-dependent hydrogenase%2C large subunit%2C nickel binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 60991 61036 . + . ID=id-AFQR01000020.1:60991..61036;Dbxref=InterPro:IPR018194;Note=PatternScan:PS00507~ni_hgenase_l_1~nickel-dependent hydrogenase%2C large subunit%2C nickel binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 62622 63848 . - . ID=gene-GGE_1218;Name=GGE_1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1218 GCA_000222085.2|AFQR01000020.1 Genbank CDS 62622 63848 . - 0 ID=cds-EGT81523.1;Parent=gene-GGE_1218;Dbxref=GeneID:315634305,NCBI_GP:EGT81523.1;Name=EGT81523.1;Note=ZP_07889592;gbkey=CDS;locus_tag=GGE_1218;product=nickel-dependent hydrogenase;protein_id=EGT81523.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62622 63807 . - . ID=id-GGE_1218;Note=superfamily%3B label: COG5557 superfamily;gbkey=misc_feature;locus_tag=GGE_1218 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62658 62682 . - . ID=id-GGE_1218-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1218 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62745 63501 . - . ID=id-GGE_1218-3;Note=multi-dom%3B label: NrfD;gbkey=misc_feature;locus_tag=GGE_1218 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62655 63513 . + . ID=id-AFQR01000020.1:62655..63513;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62682 63570 . + . ID=id-AFQR01000020.1:62682..63570;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62682 63486 . + . ID=id-AFQR01000020.1:62682..63486;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62682 63126 . + . ID=id-AFQR01000020.1:62682..63126;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 63687 . + . ID=id-AFQR01000020.1:62691..63687;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 63354 . + . ID=id-AFQR01000020.1:62691..63354;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 63249 . + . ID=id-AFQR01000020.1:62691..63249;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 63024 . + . ID=id-AFQR01000020.1:62691..63024;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 62877 . + . ID=id-AFQR01000020.1:62691..62877;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 62691 62775 . + . ID=id-AFQR01000020.1:62691..62775;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 63841 64881 . - . ID=gene-GGE_1219;Name=GGE_1219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1219 GCA_000222085.2|AFQR01000020.1 Genbank CDS 63841 64881 . - 0 ID=cds-EGT81524.1;Parent=gene-GGE_1219;Dbxref=GeneID:301155291,InterPro:IPR006311,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR01409,NCBI_GP:EGT81524.1;Name=EGT81524.1;Note=CBW14757;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_1219;product=hydrogenase 2 4Fe-4S ferredoxin-type component;protein_id=EGT81524.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63841 64795 . - . ID=id-GGE_1219;Note=multi-dom%3B label: PRK10882;gbkey=misc_feature;locus_tag=GGE_1219 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63841 63913 . - . ID=id-GGE_1219-2;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_1219 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63919 64795 . - . ID=id-GGE_1219-3;Note=HMMPanther:PTHR11938:SF53~subfamily not named~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;locus_tag=GGE_1219 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63952 64705 . - . ID=id-GGE_1219-4;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_1219 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63877 64726 . + . ID=id-AFQR01000020.1:63877..64726;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63877 64273 . + . ID=id-AFQR01000020.1:63877..64273;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63928 64789 . + . ID=id-AFQR01000020.1:63928..64789;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63931 64246 . + . ID=id-AFQR01000020.1:63931..64246;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63934 63952 . + . ID=id-AFQR01000020.1:63934..63952;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 63937 64147 . + . ID=id-AFQR01000020.1:63937..64147;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64003 64360 . + . ID=id-AFQR01000020.1:64003..64360;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64003 64198 . + . ID=id-AFQR01000020.1:64003..64198;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 64884 66029 . - . ID=gene-GGE_1220;Name=GGE_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank CDS 64884 66029 . - 0 ID=cds-EGT81525.1;Parent=gene-GGE_1220;Dbxref=GeneID:301155292,InterPro:IPR001821,InterPro:IPR006137,InterPro:IPR006311,PFAM:PF01058,PIR:PIRSF000310,TIGRFAM:TIGR00391,TIGRFAM:TIGR01409,NCBI_GP:EGT81525.1;Name=EGT81525.1;Note=CBW14758;Ontology_term=GO:0055114,GO:0009375,GO:0051539,GO:0008137,GO:0008901,GO:0051536,GO:0048038;gbkey=CDS;go_component=ferredoxin hydrogenase complex|0009375||;go_function=4 iron 4 sulfur cluster binding|0051539||,NADH dehydrogenase (ubiquinone) activity|0008137||,ferredoxin hydrogenase activity|0008901||,iron-sulfur cluster binding|0051536||,quinone binding|0048038||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1220;product=hydrogenase 2%2C small subunit;protein_id=EGT81525.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64884 65970 . - . ID=id-GGE_1220;Note=multi-dom%3B label: PRK10468;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64884 64998 . - . ID=id-GGE_1220-2;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64890 65985 . - . ID=id-GGE_1220-3;Dbxref=InterPro:IPR001821,TIGRFAM:TIGR00391;Note=hyda: hydrogenase (nife) small subunit~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64899 65973 . - . ID=id-GGE_1220-4;Dbxref=InterPro:IPR001821,PIR:PIRSF000310;Note=uptake hydrogenase%2C small subunit~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64926 64953 . - . ID=id-GGE_1220-5;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65016 65694 . - . ID=id-GGE_1220-6;Note=superfamily:SSF56770~hyda/nqo6-like;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65031 65412 . - . ID=id-GGE_1220-7;Dbxref=InterPro:IPR006137;Note=Gene3D:3.40.50.700~nadh ubiquinone oxidoreductase-like%2C 20kda subunit;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65064 65325 . - . ID=id-GGE_1220-8;Dbxref=InterPro:IPR006137,PFAM:PF01058;Note=oxidored_q6~nadh ubiquinone oxidoreductase-like%2C 20kda subunit;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65064 65253 . - . ID=id-GGE_1220-9;Note=superfamily%3B label: Oxidored_q6 superfamily;gbkey=misc_feature;locus_tag=GGE_1220 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64926 65901 . + . ID=id-AFQR01000020.1:64926..65901;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64926 65442 . + . ID=id-AFQR01000020.1:64926..65442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64935 65973 . + . ID=id-AFQR01000020.1:64935..65973;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64938 65523 . + . ID=id-AFQR01000020.1:64938..65523;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64941 65577 . + . ID=id-AFQR01000020.1:64941..65577;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64941 65319 . + . ID=id-AFQR01000020.1:64941..65319;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64953 65886 . + . ID=id-AFQR01000020.1:64953..65886;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64953 65019 . + . ID=id-AFQR01000020.1:64953..65019;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64956 65445 . + . ID=id-AFQR01000020.1:64956..65445;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64956 65226 . + . ID=id-AFQR01000020.1:64956..65226;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64959 65355 . + . ID=id-AFQR01000020.1:64959..65355;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64959 65088 . + . ID=id-AFQR01000020.1:64959..65088;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 64965 65649 . + . ID=id-AFQR01000020.1:64965..65649;Dbxref=InterPro:IPR001821;Note=FPrintScan:PR00614~nihgnasesmll~[ni-fe]-hydrogenase%2C small subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65139 65562 . + . ID=id-AFQR01000020.1:65139..65562;Note=Gene3D:4.10.480.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 65309 65318 . + . ID=id-AFQR01000020.1:65309..65318;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 66239 67672 . - . ID=gene-GGE_1221;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank CDS 66239 67672 . - 0 ID=cds-EGT81526.1;Parent=gene-GGE_1221;Dbxref=InterPro:IPR001240,InterPro:IPR001468,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR013798,PFAM:PF00218,PFAM:PF00697,NCBI_GP:EGT81526.1;Name=EGT81526.1;Ontology_term=GO:0008152,GO:0006568,GO:0003824,GO:0004425,GO:0004640;gbkey=CDS;gene=trpC;go_function=catalytic activity|0003824||,indole-3-glycerol-phosphate synthase activity|0004425||,phosphoribosylanthranilate isomerase activity|0004640||;go_process=metabolic process|0008152||,tryptophan metabolic process|0006568||;locus_tag=GGE_1221;product=Tryptophan biosynthesis protein trpCF;protein_id=EGT81526.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66278 67628 . - . ID=id-GGE_1221;Note=multi-dom%3B label: PRK09427;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66281 67079 . - . ID=id-GGE_1221-2;Note=HMMPanther:PTHR22854:SF5~tryptophan biosynthesis protein trpcf~HMMPanther:PTHR22854~family not named;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66281 67028 . - . ID=id-GGE_1221-3;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66284 67007 . - . ID=id-GGE_1221-4;Dbxref=InterPro:IPR013798,PFAM:PF00218;Note=igps~indole-3-glycerol phosphate synthase;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66305 67001 . - . ID=id-GGE_1221-5;Dbxref=InterPro:IPR011060;Note=superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66389 66902 . - . ID=id-GGE_1221-6;Note=specific~superfamily%3B label: IGPS;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66512 66521 . - . ID=id-GGE_1221-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=trpC;locus_tag=GGE_1221 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66296 66431 . + . ID=id-AFQR01000020.1:66296..66431;Dbxref=InterPro:IPR001468;Note=PatternScan:PS00614~igps~indole-3-glycerol phosphate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66836 67070 . + . ID=id-AFQR01000020.1:66836..67070;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66836 67064 . + . ID=id-AFQR01000020.1:66836..67064;Dbxref=InterPro:IPR001240,PFAM:PF00697;Note=prai~n-(5'phosphoribosyl)anthranilate isomerase (prai);gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66842 67064 . + . ID=id-AFQR01000020.1:66842..67064;Note=specific~superfamily%3B label: PRAI;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 66848 67058 . + . ID=id-AFQR01000020.1:66848..67058;Dbxref=InterPro:IPR011060;Note=superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 67731 67755 . + . ID=id-AFQR01000020.1:67731..67755;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 67737 67926 . + . ID=id-AFQR01000020.1:67737..67926;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 67746 67746 . + . ID=id-AFQR01000020.1:67746..67746;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 67752 68007 . + . ID=id-AFQR01000020.1:67752..68007;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 67752 67821 . + . ID=id-AFQR01000020.1:67752..67821;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 68194 69195 . - . ID=gene-GGE_1222;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank CDS 68194 69195 . - 0 ID=cds-EGT81527.1;Parent=gene-GGE_1222;Dbxref=GeneID:1174790,InterPro:IPR000312,InterPro:IPR005940,InterPro:IPR017459,InterPro:IPR020072,PFAM:PF00591,PFAM:PF02885,TIGRFAM:TIGR01245,NCBI_GP:EGT81527.1;Name=EGT81527.1;Ontology_term=GO:0008152,GO:0000162,GO:0004048,GO:0016757;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||,transferase activity transferring glycosyl groups|0016757||;go_process=metabolic process|0008152||,tryptophan biosynthetic process|0000162||;locus_tag=GGE_1222;product=Anthranilate phosphoribosyltransferase;protein_id=EGT81527.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68194 69193 . - . ID=id-GGE_1222;Note=multi-dom%3B label: trpD;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68194 68404 . - . ID=id-GGE_1222-2;Dbxref=InterPro:IPR017459;Note=superfamily:SSF47648~nucleoside phosphorylase/phosphoribosyltransferase n-terminal domain~glycosyl transferase%2C family 3;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68200 68392 . - . ID=id-GGE_1222-3;Note=superfamily%3B label: Glycos_trans_3N superfamily;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68206 68383 . - . ID=id-GGE_1222-4;Dbxref=InterPro:IPR017459,PFAM:PF02885;Note=glycos_trans_3n~glycosyl transferase%2C family 3;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68209 69181 . - . ID=id-GGE_1222-5;Dbxref=InterPro:IPR005940;Note=HAMAP:MF_00211~trpd~anthranilate phosphoribosyl transferase;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68215 69175 . - . ID=id-GGE_1222-6;Dbxref=InterPro:IPR005940,TIGRFAM:TIGR01245;Note=trpd: anthranilate phosphoribosyltransferase~anthranilate phosphoribosyl transferase;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68242 69145 . - . ID=id-GGE_1222-7;Note=HMMPanther:PTHR11922:SF15~subfamily not named~HMMPanther:PTHR11922~family not named;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68407 68983 . - . ID=id-GGE_1222-8;Dbxref=InterPro:IPR000312;Note=superfamily:SSF52418~nucleoside phosphorylase/phosphoribosyltransferase catalytic domain~glycosyl transferase%2C family 3;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68413 68950 . - . ID=id-GGE_1222-9;Note=superfamily%3B label: Glycos_transf_3 superfamily;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68416 68944 . - . ID=id-GGE_1222-10;Dbxref=InterPro:IPR000312,PFAM:PF00591;Note=glycos_transf_3~glycosyl transferase%2C family 3;gbkey=misc_feature;gene=trpD;locus_tag=GGE_1222 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68233 69061 . + . ID=id-AFQR01000020.1:68233..69061;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68293 68650 . + . ID=id-AFQR01000020.1:68293..68650;Dbxref=InterPro:IPR020072;Note=Gene3D:1.20.970.10~glycosyl transferase%2C family 3%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68360 68369 . + . ID=id-AFQR01000020.1:68360..68369;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 68635 68749 . + . ID=id-AFQR01000020.1:68635..68749;Dbxref=InterPro:IPR000312;Note=Gene3D:3.40.1030.10~glycosyl transferase%2C family 3;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69122 69131 . + . ID=id-AFQR01000020.1:69122..69131;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 69248 69634 . - . ID=gene-GGE_1223;Name=GGE_1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1223 GCA_000222085.2|AFQR01000020.1 Genbank CDS 69248 69634 . - 0 ID=cds-EGT81528.1;Parent=gene-GGE_1223;Dbxref=GeneID:6831737,InterPro:IPR014347,NCBI_GP:EGT81528.1;Name=EGT81528.1;Note=HI_1388.1;gbkey=CDS;locus_tag=GGE_1223;product=putative tautomerase/MIF;protein_id=EGT81528.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69248 69626 . - . ID=id-GGE_1223;Dbxref=InterPro:IPR014347;Note=Gene3D:3.30.429.10~tautomerase;gbkey=misc_feature;locus_tag=GGE_1223 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69248 69608 . - . ID=id-GGE_1223-2;Note=superfamily:SSF55331~tautomerase/mif;gbkey=misc_feature;locus_tag=GGE_1223 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69646 69655 . + . ID=id-AFQR01000020.1:69646..69655;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69664 69673 . - . ID=id-AFQR01000020.1:69664..69673;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 69683 70264 . - . ID=gene-GGE_1224;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank CDS 69683 70264 . - 0 ID=cds-EGT81529.1;Parent=gene-GGE_1224;Dbxref=GeneID:6175098,InterPro:IPR001317,InterPro:IPR006220,InterPro:IPR006221,InterPro:IPR011702,InterPro:IPR017926,PFAM:PF00117,TIGRFAM:TIGR00566,NCBI_GP:EGT81529.1;Name=EGT81529.1;Ontology_term=GO:0009058,GO:0006541,GO:0008152,GO:0004049,GO:0003824;gbkey=CDS;gene=trpG;go_function=anthranilate synthase activity|0004049||,catalytic activity|0003824||;go_process=biosynthetic process|0009058||,glutamine metabolic process|0006541||,metabolic process|0008152||;locus_tag=GGE_1224;product=Anthranilate synthase component II;protein_id=EGT81529.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69683 70253 . - . ID=id-GGE_1224;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69692 70256 . - . ID=id-GGE_1224-2;Dbxref=InterPro:IPR017926;Note=ProfileScan:PS51273~gatase_type_1~glutamine amidotransferase type 1;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69692 70244 . - . ID=id-GGE_1224-3;Dbxref=InterPro:IPR006221,TIGRFAM:TIGR00566;Note=trpg_papa: glutamine amidotransferase of a~anthranilate synthase%2C glutamine amidotransferase~Gene3D:3.40.50.880;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69692 70241 . - . ID=id-GGE_1224-4;Note=HMMPanther:PTHR11922:SF7~subfamily not named~HMMPanther:PTHR11922~family not named;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69695 70235 . - . ID=id-GGE_1224-5;Note=specific~superfamily%3B label: GATase1_Anthranilate_Synthase;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69695 69728 . - . ID=id-GGE_1224-6;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69698 70241 . - . ID=id-GGE_1224-7;Note=multi-dom%3B label: GATase;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69701 70229 . - . ID=id-GGE_1224-8;Dbxref=InterPro:IPR017926,PFAM:PF00117;Note=gatase~glutamine amidotransferase type 1;gbkey=misc_feature;gene=trpG;locus_tag=GGE_1224 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69710 69995 . + . ID=id-AFQR01000020.1:69710..69995;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69713 69839 . + . ID=id-AFQR01000020.1:69713..69839;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69719 69920 . + . ID=id-AFQR01000020.1:69719..69920;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69722 70055 . + . ID=id-AFQR01000020.1:69722..70055;Dbxref=InterPro:IPR006220;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69725 70181 . + . ID=id-AFQR01000020.1:69725..70181;Dbxref=InterPro:IPR006220,InterPro:IPR011702;Note=FPrintScan:PR00097~antsnthaseii~anthranilate synthase component ii/delta crystallin~FPrintScan:PR00096~gatase~glutamine amidotransferase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69728 69830 . + . ID=id-AFQR01000020.1:69728..69830;Dbxref=InterPro:IPR001317;Note=FPrintScan:PR00099~cpsgatase~carbamoyl-phosphate synthase%2C gatase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 69734 69920 . + . ID=id-AFQR01000020.1:69734..69920;Dbxref=InterPro:IPR001317;Note=FPrintScan:PR00099~cpsgatase~carbamoyl-phosphate synthase%2C gatase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 70277 71827 . - . ID=gene-GGE_1225;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank CDS 70277 71827 . - 0 ID=cds-EGT81530.1;Parent=gene-GGE_1225;Dbxref=GeneID:1174792,InterPro:IPR005257,InterPro:IPR005801,InterPro:IPR006805,InterPro:IPR015890,InterPro:IPR019999,PFAM:PF00425,PFAM:PF04715,TIGRFAM:TIGR00565,NCBI_GP:EGT81530.1;Name=EGT81530.1;Ontology_term=GO:0009058,GO:0004049,GO:0016833;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||,oxo-acid-lyase activity|0016833||;go_process=biosynthetic process|0009058||;locus_tag=GGE_1225;product=Anthranilate synthase component 1;protein_id=EGT81530.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70277 71825 . - . ID=id-GGE_1225;Note=multi-dom%3B label: PRK13564;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70286 71795 . - . ID=id-GGE_1225-2;Dbxref=InterPro:IPR005801;Note=superfamily:SSF56322~adc synthase~adc synthase;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70289 71798 . - . ID=id-GGE_1225-3;Dbxref=InterPro:IPR005801;Note=Gene3D:3.60.120.10~adc synthase;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70325 71771 . - . ID=id-GGE_1225-4;Dbxref=InterPro:IPR005257,TIGRFAM:TIGR00565;Note=trpe_proteo: anthranilate synthase compon~anthranilate synthase component i%2C trpe-like%2C bacterial;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70337 70802 . - . ID=id-GGE_1225-5;Dbxref=InterPro:IPR006805,PFAM:PF04715;Note=anth_synt_i_n~anthranilate synthase component i;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70346 71741 . - . ID=id-GGE_1225-6;Note=HMMPanther:PTHR11236:SF9~anthranilate synthase component i~HMMPanther:PTHR11236~family not named;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70427 70712 . - . ID=id-GGE_1225-7;Note=superfamily%3B label: Anth_synt_I_N superfamily;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70997 71009 . - . ID=id-GGE_1225-8;Note=superfamily%3B label: Chorismate_bind superfamily;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71003 71054 . - . ID=id-GGE_1225-9;Dbxref=InterPro:IPR015890,PFAM:PF00425;Note=chorismate_bind~chorismate-binding protein;gbkey=misc_feature;gene=trpE;locus_tag=GGE_1225 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70316 71300 . + . ID=id-AFQR01000020.1:70316..71300;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70319 71363 . + . ID=id-AFQR01000020.1:70319..71363;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70319 71321 . + . ID=id-AFQR01000020.1:70319..71321;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70322 71648 . + . ID=id-AFQR01000020.1:70322..71648;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 70322 71603 . + . ID=id-AFQR01000020.1:70322..71603;Dbxref=InterPro:IPR019999;Note=FPrintScan:PR00095~antsnthasei~anthranilate synthase component i;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 71930 72724 . - . ID=gene-GGE_1226;Name=GGE_1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1226 GCA_000222085.2|AFQR01000020.1 Genbank CDS 71930 72724 . - 0 ID=cds-EGT81531.1;Parent=gene-GGE_1226;Dbxref=GeneID:319776331,InterPro:IPR001173,PFAM:PF00535,NCBI_GP:EGT81531.1;Name=EGT81531.1;Note=YP_004138819;gbkey=CDS;locus_tag=GGE_1226;product=glycosyltransferase;protein_id=EGT81531.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71930 72461 . - . ID=id-GGE_1226;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;locus_tag=GGE_1226 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71954 72284 . - . ID=id-GGE_1226-2;Dbxref=InterPro:IPR001173,PFAM:PF00535;Note=glycos_transf_2~glycosyl transferase%2C family 2;gbkey=misc_feature;locus_tag=GGE_1226 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71960 72449 . - . ID=id-GGE_1226-3;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_1226 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71960 72272 . - . ID=id-GGE_1226-4;Note=superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;locus_tag=GGE_1226 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 71969 72113 . + . ID=id-AFQR01000020.1:71969..72113;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 73098 73580 . - . ID=gene-GGE_1227;Name=GGE_1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank CDS 73098 73580 . - 0 ID=cds-EGT81532.1;Parent=gene-GGE_1227;Dbxref=GeneID:1175739,InterPro:IPR002177,InterPro:IPR008331,InterPro:IPR009078,InterPro:IPR012347,InterPro:IPR023188,PFAM:PF00210,PIR:PIRSF005900,NCBI_GP:EGT81532.1;Name=EGT81532.1;Note=HI_1349;Ontology_term=GO:0006879,GO:0055114,GO:0006950,GO:0008199,GO:0016491,GO:0046914;gbkey=CDS;go_function=ferric iron binding|0008199||,oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=cellular iron ion homeostasis|0006879||,oxidation-reduction process|0055114||,response to stress|0006950||;locus_tag=GGE_1227;product=putative ferritin/DPS protein domain-containing protein;protein_id=EGT81532.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73098 73566 . - . ID=id-GGE_1227;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73098 73563 . - . ID=id-GGE_1227-2;Dbxref=InterPro:IPR012347;Note=Gene3D:1.20.1260.10~ferritin-related;gbkey=misc_feature;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73110 73566 . - . ID=id-GGE_1227-3;Dbxref=InterPro:IPR002177,PIR:PIRSF005900;Note=ferritin-like protein%2C dps type~dna-binding protein dps;gbkey=misc_feature;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73152 73515 . - . ID=id-GGE_1227-4;Dbxref=InterPro:IPR008331,PFAM:PF00210;Note=ferritin~ferritin/dps protein domain;gbkey=misc_feature;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73176 73482 . - . ID=id-GGE_1227-5;Note=specific~superfamily%3B label: DPS;gbkey=misc_feature;locus_tag=GGE_1227 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73134 73140 . + . ID=id-AFQR01000020.1:73134..73140;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73143 73290 . + . ID=id-AFQR01000020.1:73143..73290;Dbxref=InterPro:IPR023188;Note=PatternScan:PS00819~dps_2~dna-binding protein dps%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73149 73284 . + . ID=id-AFQR01000020.1:73149..73284;Dbxref=InterPro:IPR002177;Note=FPrintScan:PR01346~helnapaprot~dna-binding protein dps;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73149 73212 . + . ID=id-AFQR01000020.1:73149..73212;Dbxref=InterPro:IPR002177,InterPro:IPR023188;Note=FPrintScan:PR01346~helnapaprot~dna-binding protein dps~PatternScan:PS00818~dps_1~dna-binding protein dps%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73155 73497 . + . ID=id-AFQR01000020.1:73155..73497;Dbxref=InterPro:IPR002177;Note=FPrintScan:PR01346~helnapaprot~dna-binding protein dps;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 73850 74728 . + . ID=gene-GGE_1228;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank CDS 73850 74728 . + 0 ID=cds-EGT81533.1;Parent=gene-GGE_1228;Dbxref=GeneID:167006537,InterPro:IPR002125,InterPro:IPR006263,InterPro:IPR013171,InterPro:IPR016192,InterPro:IPR016193,InterPro:IPR020797,PFAM:PF00383,PFAM:PF08211,TIGRFAM:TIGR01355,NCBI_GP:EGT81533.1;Name=EGT81533.1;Ontology_term=GO:0046087,GO:0003824,GO:0004126,GO:0016787,GO:0008270;gbkey=CDS;gene=cdd;go_function=catalytic activity|0003824||,cytidine deaminase activity|0004126||,hydrolase activity|0016787||,zinc ion binding|0008270||;go_process=cytidine metabolic process|0046087||;locus_tag=GGE_1228;product=Cytidine deaminase;protein_id=EGT81533.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73850 74726 . + . ID=id-GGE_1228;Dbxref=InterPro:IPR020797;Note=multi-dom~HAMAP:MF_01558~cyt_deam~cytidine deaminase%2C bacteria%3B label: PRK09027;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73850 74297 . + . ID=id-GGE_1228-2;Dbxref=InterPro:IPR016193;Note=superfamily:SSF53927~cytidine deaminase-like~cytidine deaminase-like;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73868 74633 . + . ID=id-GGE_1228-3;Note=HMMPanther:PTHR11644:SF12~cytidine deaminase~HMMPanther:PTHR11644~family not named;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73934 74645 . + . ID=id-GGE_1228-4;Dbxref=InterPro:IPR006263,TIGRFAM:TIGR01355;Note=cyt_deam_dimer: cytidine deaminase~cytidine deaminase%2C homodimeric;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73949 74279 . + . ID=id-GGE_1228-5;Note=Gene3D:3.40.140.10;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74006 74114 . + . ID=id-GGE_1228-6;Dbxref=InterPro:IPR002125,PFAM:PF00383;Note=dcmp_cyt_deam_1~cmp/dcmp deaminase%2C zinc-binding;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74018 74132 . + . ID=id-GGE_1228-7;Note=specific~superfamily%3B label: cytidine_deaminase;gbkey=misc_feature;gene=cdd;locus_tag=GGE_1228 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 73955 74153 . - . ID=id-AFQR01000020.1:73955..74153;Dbxref=InterPro:IPR016192;Note=PatternScan:PS00903~cyt_dcmp_deaminases~apobec/cmp deaminase%2C zinc-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74036 74426 . - . ID=id-AFQR01000020.1:74036..74426;Note=specific~superfamily%3B label: cytidine_deaminase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74153 74396 . - . ID=id-AFQR01000020.1:74153..74396;Note=Gene3D:3.40.140.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74216 74318 . - . ID=id-AFQR01000020.1:74216..74318;Dbxref=InterPro:IPR013171,PFAM:PF08211;Note=dcmp_cyt_deam_2~cytidine/deoxycytidylate deaminase%2C zinc-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74276 74300 . - . ID=id-AFQR01000020.1:74276..74300;Dbxref=InterPro:IPR016193;Note=superfamily:SSF53927~cytidine deaminase-like~cytidine deaminase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 74777 75742 . - . ID=gene-GGE_1229;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank CDS 74777 75742 . - 0 ID=cds-EGT81534.1;Parent=gene-GGE_1229;Dbxref=GeneID:166215243,InterPro:IPR010017,PFAM:PF08003,TIGRFAM:TIGR00452,NCBI_GP:EGT81534.1;Name=EGT81534.1;Ontology_term=GO:0002098,GO:0016300;gbkey=CDS;gene=cmoB;go_function=tRNA (uracil) methyltransferase activity|0016300||;go_process=tRNA wobble uridine modification|0002098||;locus_tag=GGE_1229;product=tRNA mo5U34-methyltransferase;protein_id=EGT81534.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74777 75740 . - . ID=id-GGE_1229;Note=multi-dom%3B label: PRK15068;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74777 75719 . - . ID=id-GGE_1229-2;Dbxref=InterPro:IPR010017,TIGRFAM:TIGR00452;Note=tigr00452: putative methyltransferase~trna (mo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74798 75722 . - . ID=id-GGE_1229-3;Dbxref=InterPro:IPR010017,PFAM:PF08003;Note=methyltransf_9~trna (mo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74813 75707 . - . ID=id-GGE_1229-4;Dbxref=InterPro:IPR010017;Note=HAMAP:MF_01590~trna_methyltr_cmob~trna (mo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74852 75668 . - . ID=id-GGE_1229-5;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 74864 75602 . - . ID=id-GGE_1229-6;Note=HMMPanther:PTHR10108:SF81~subfamily not named~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75080 75329 . - . ID=id-GGE_1229-7;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75557 75566 . - . ID=id-GGE_1229-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cmoB;locus_tag=GGE_1229 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75092 75149 . + . ID=id-AFQR01000020.1:75092..75149;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 75739 77253 . - . ID=gene-GGE_1230;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank CDS 75739 77253 . - 0 ID=cds-EGT81535.1;Parent=gene-GGE_1230;Dbxref=GeneID:1172774,InterPro:IPR001734,InterPro:IPR011851,InterPro:IPR018212,InterPro:IPR019900,PFAM:PF00474,TIGRFAM:TIGR00813,TIGRFAM:TIGR02121,NCBI_GP:EGT81535.1;Name=EGT81535.1;Ontology_term=GO:0015824,GO:0006814,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005298,GO:0031402,GO:0005215;gbkey=CDS;gene=putP;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=proline:sodium symporter activity|0005298||,sodium ion binding|0031402||,transporter activity|0005215||;go_process=proline transport|0015824||,sodium ion transport|0006814||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1230;product=Sodium/proline symporter;protein_id=EGT81535.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75751 77095 . - . ID=id-GGE_1230;Dbxref=InterPro:IPR001734;Note=ProfileScan:PS50283~na_solut_symp_3~sodium/solute symporter;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75754 77230 . - . ID=id-GGE_1230-2;Dbxref=InterPro:IPR011851,TIGRFAM:TIGR02121;Note=na_pro_sym: sodium/proline symporter~sodium/proline symporter;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75757 77227 . - . ID=id-GGE_1230-3;Note=superfamily%3B label: SSF superfamily;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75763 77227 . - . ID=id-GGE_1230-4;Dbxref=InterPro:IPR001734;Note=HMMPanther:PTHR11819:SF52~sodium/proline symporter~HMMPanther:PTHR11819~family not named~sodium/solute symporter;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75769 75799 . - . ID=id-GGE_1230-5;Note=transmembrane_regions;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75844 76960 . - . ID=id-GGE_1230-6;Dbxref=InterPro:IPR001734,InterPro:IPR019900,PFAM:PF00474,TIGRFAM:TIGR00813;Note=sss: transporter%2C solute:sodium symporter~sodium/solute symporter%2C subgroup~ssf~sodium/solute symporter;gbkey=misc_feature;gene=putP;locus_tag=GGE_1230 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75775 77155 . + . ID=id-AFQR01000020.1:75775..77155;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75775 76729 . + . ID=id-AFQR01000020.1:75775..76729;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75775 76459 . + . ID=id-AFQR01000020.1:75775..76459;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75781 76882 . + . ID=id-AFQR01000020.1:75781..76882;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75784 76771 . + . ID=id-AFQR01000020.1:75784..76771;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75787 76600 . + . ID=id-AFQR01000020.1:75787..76600;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75793 77032 . + . ID=id-AFQR01000020.1:75793..77032;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75799 76864 . + . ID=id-AFQR01000020.1:75799..76864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75799 75961 . + . ID=id-AFQR01000020.1:75799..75961;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75802 77008 . + . ID=id-AFQR01000020.1:75802..77008;Dbxref=InterPro:IPR018212;Note=PatternScan:PS00457~na_solut_symp_2~sodium/solute symporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 77122 . + . ID=id-AFQR01000020.1:75808..77122;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76951 . + . ID=id-AFQR01000020.1:75808..76951;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76735 . + . ID=id-AFQR01000020.1:75808..76735;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76579 . + . ID=id-AFQR01000020.1:75808..76579;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76429 . + . ID=id-AFQR01000020.1:75808..76429;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76318 . + . ID=id-AFQR01000020.1:75808..76318;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76231 . + . ID=id-AFQR01000020.1:75808..76231;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 76120 . + . ID=id-AFQR01000020.1:75808..76120;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75808 75865 . + . ID=id-AFQR01000020.1:75808..75865;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 75817 76210 . + . ID=id-AFQR01000020.1:75817..76210;Dbxref=InterPro:IPR018212;Note=PatternScan:PS00456~na_solut_symp_1~sodium/solute symporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 76760 76769 . + . ID=id-AFQR01000020.1:76760..76769;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 77369 78844 . + . ID=gene-GGE_1231;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank CDS 77369 78844 . + 0 ID=cds-EGT81536.1;Parent=gene-GGE_1231;Dbxref=GeneID:1168735,InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR019307,PFAM:PF00575,PFAM:PF10150,TIGRFAM:TIGR00757,NCBI_GP:EGT81536.1;Name=EGT81536.1;Ontology_term=GO:0006396,GO:0005737,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_component=cytoplasm|0005737||;go_function=RNA binding|0003723||,ribonuclease activity|0004540||;go_process=RNA processing|0006396||;locus_tag=GGE_1231;product=Ribonuclease G;protein_id=EGT81536.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77375 78839 . + . ID=id-GGE_1231;Note=multi-dom%3B label: PRK11712;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77411 78611 . + . ID=id-GGE_1231-2;Dbxref=InterPro:IPR004659,TIGRFAM:TIGR00757;Note=rnaseeg: ribonuclease%2C rne/rng family~ribonuclease e/g;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77462 77666 . + . ID=id-GGE_1231-3;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77468 77660 . + . ID=id-GGE_1231-4;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77483 77624 . + . ID=id-GGE_1231-5;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77489 77639 . + . ID=id-GGE_1231-6;Dbxref=InterPro:IPR003029,InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like~ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 77744 78182 . + . ID=id-GGE_1231-7;Dbxref=InterPro:IPR019307,PFAM:PF10150;Note=rnase_e_g~rna-binding protein au-1/ribonuclease e/g;gbkey=misc_feature;gene=rng;locus_tag=GGE_1231 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 78857 78866 . + . ID=id-AFQR01000020.1:78857..78866;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 78888 78897 . - . ID=id-AFQR01000020.1:78888..78897;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79044 79062 . - . ID=id-AFQR01000020.1:79044..79062;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 79305 79850 . + . ID=gene-GGE_1232;Name=GGE_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank CDS 79305 79850 . + 0 ID=cds-EGT81537.1;Parent=gene-GGE_1232;Dbxref=InterPro:IPR007627,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,InterPro:IPR014289,PFAM:PF04542,PFAM:PF08281,TIGRFAM:TIGR02937,TIGRFAM:TIGR02943,NCBI_GP:EGT81537.1;Name=EGT81537.1;Note=HI_1459;Ontology_term=GO:0006355,GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||,sigma factor activity|0016987||;go_process=regulation of transcription DNA-dependent|0006355||,transcription initiation DNA-dependent|0006352||;locus_tag=GGE_1232;product=Putative RNA polymerase sigma factor;protein_id=EGT81537.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79305 79848 . + . ID=id-GGE_1232;Note=multi-dom%3B label: PRK12530;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79305 79587 . + . ID=id-GGE_1232-2;Dbxref=InterPro:IPR013325;Note=superfamily:SSF88946~sigma2 domain of rna polymerase sigma factors~rna polymerase sigma factor%2C region 2;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79311 79842 . + . ID=id-GGE_1232-3;Dbxref=InterPro:IPR014289,TIGRFAM:TIGR02943;Note=sig70_famx1: rna polymerase sigma-70 fact~rna polymerase sigma-24-related;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79314 79830 . + . ID=id-GGE_1232-4;Dbxref=InterPro:IPR014284,TIGRFAM:TIGR02937;Note=sigma70-ecf: rna polymerase sigma factor%2C~rna polymerase sigma-70;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79329 79509 . + . ID=id-GGE_1232-5;Note=Gene3D:1.10.1740.10;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79338 79500 . + . ID=id-GGE_1232-6;Dbxref=InterPro:IPR007627,PFAM:PF04542;Note=sigma70_r2~rna polymerase sigma-70 region 2;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79356 79485 . + . ID=id-GGE_1232-7;Note=superfamily%3B label: Sigma70_r2 superfamily;gbkey=misc_feature;locus_tag=GGE_1232 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79458 79674 . - . ID=id-AFQR01000020.1:79458..79674;Dbxref=InterPro:IPR013249,PFAM:PF08281;Note=sigma70_r4_2~rna polymerase sigma factor 70%2C region 4 type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79470 79665 . - . ID=id-AFQR01000020.1:79470..79665;Note=specific~superfamily%3B label: Sigma70_r4;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 79518 79632 . - . ID=id-AFQR01000020.1:79518..79632;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma3 and sigma4 domains of rna polymerase sigma factors~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 79860 80033 . + . ID=gene-GGE_1233;Name=GGE_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1233 GCA_000222085.2|AFQR01000020.1 Genbank CDS 79860 80033 . + 0 ID=cds-EGT81538.1;Parent=gene-GGE_1233;Dbxref=GeneID:145630764,NCBI_GP:EGT81538.1;Name=EGT81538.1;Note=ZP_01786542;gbkey=CDS;locus_tag=GGE_1233;product=dsDNA-mimic protein;protein_id=EGT81538.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80068 80077 . - . ID=id-AFQR01000020.1:80068..80077;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 80135 80998 . - . ID=gene-GGE_1234;Name=GGE_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank CDS 80135 80998 . - 0 ID=cds-EGT81539.1;Parent=gene-GGE_1234;Dbxref=GeneID:145630763,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT81539.1;Name=EGT81539.1;Note=ZP_01786541;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1234;product=putative multidrug resistance efflux transporter EmrE;protein_id=EGT81539.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80156 80978 . - . ID=id-GGE_1234;Note=HMMPanther:PTHR22911~family not named;gbkey=misc_feature;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80174 80192 . - . ID=id-GGE_1234-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80207 80492 . - . ID=id-GGE_1234-3;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80252 80858 . - . ID=id-GGE_1234-4;Note=multi-dom%3B label: 2A78;gbkey=misc_feature;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80273 80438 . - . ID=id-GGE_1234-5;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_1234 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80189 80933 . + . ID=id-AFQR01000020.1:80189..80933;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80189 80687 . + . ID=id-AFQR01000020.1:80189..80687;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80189 80264 . + . ID=id-AFQR01000020.1:80189..80264;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80192 80510 . + . ID=id-AFQR01000020.1:80192..80510;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80195 80594 . + . ID=id-AFQR01000020.1:80195..80594;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80198 80762 . + . ID=id-AFQR01000020.1:80198..80762;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80204 80849 . + . ID=id-AFQR01000020.1:80204..80849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80204 80768 . + . ID=id-AFQR01000020.1:80204..80768;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80204 80423 . + . ID=id-AFQR01000020.1:80204..80423;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80438 80696 . + . ID=id-AFQR01000020.1:80438..80696;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 80486 80633 . + . ID=id-AFQR01000020.1:80486..80633;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 81176 82234 . + . ID=gene-GGE_1235;Name=GGE_1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank CDS 81176 82234 . + 0 ID=cds-EGT81540.1;Parent=gene-GGE_1235;Dbxref=GeneID:1351814,InterPro:IPR002569,InterPro:IPR002579,InterPro:IPR011057,PFAM:PF01625,PFAM:PF01641,TIGRFAM:TIGR00357,TIGRFAM:TIGR00401,NCBI_GP:EGT81540.1;Name=EGT81540.1;Note=msrAB;Ontology_term=GO:0055114,GO:0019538,GO:0016671,GO:0008113;gbkey=CDS;go_function=oxidoreductase activity acting on a sulfur group of donors disulfide as acceptor|0016671||,peptide-methionine-(S)-S-oxide reductase activity|0008113||;go_process=oxidation-reduction process|0055114||,protein metabolic process|0019538||;locus_tag=GGE_1235;product=Peptide methionine sulfoxide reductase msrA/msrB;protein_id=EGT81540.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81239 81689 . + . ID=id-GGE_1235;Dbxref=InterPro:IPR002569;Note=Gene3D:3.30.1060.10~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81284 81788 . + . ID=id-GGE_1235-2;Note=superfamily%3B label: PMSR superfamily;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81284 81782 . + . ID=id-GGE_1235-3;Dbxref=InterPro:IPR002569;Note=superfamily:SSF55068~peptide methionine sulfoxide reductase~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81284 81686 . + . ID=id-GGE_1235-4;Note=superfamily%3B label: PMSR superfamily;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81284 81680 . + . ID=id-GGE_1235-5;Dbxref=InterPro:IPR002569;Note=superfamily:SSF55068~peptide methionine sulfoxide reductase~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81290 81761 . + . ID=id-GGE_1235-6;Dbxref=InterPro:IPR002569;Note=Gene3D:3.30.1060.10~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81299 81746 . + . ID=id-GGE_1235-7;Dbxref=InterPro:IPR002569;Note=HAMAP:MF_01401~msra~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81299 81644 . + . ID=id-GGE_1235-8;Dbxref=InterPro:IPR002569;Note=HAMAP:MF_01401~msra~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81302 81725 . + . ID=id-GGE_1235-9;Dbxref=InterPro:IPR002569,TIGRFAM:TIGR00401;Note=msra: peptide-methionine (s)-s-oxide reduct~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81302 81623 . + . ID=id-GGE_1235-10;Dbxref=InterPro:IPR002569,TIGRFAM:TIGR00401;Note=msra: peptide-methionine (s)-s-oxide reduct~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81305 81728 . + . ID=id-GGE_1235-11;Dbxref=InterPro:IPR002569,PFAM:PF01625;Note=pmsr~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81305 81626 . + . ID=id-GGE_1235-12;Dbxref=InterPro:IPR002569,PFAM:PF01625;Note=pmsr~peptide methionine sulphoxide reductase msra;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81662 81845 . + . ID=id-GGE_1235-13;Note=HMMPanther:PTHR10173:SF5~peptide methionine sulfoxide reductase msrb~HMMPanther:PTHR10173~methionine sulfoxide reductase;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81662 81743 . + . ID=id-GGE_1235-14;Note=HMMPanther:PTHR10173:SF5~peptide methionine sulfoxide reductase msrb~HMMPanther:PTHR10173~methionine sulfoxide reductase;gbkey=misc_feature;locus_tag=GGE_1235 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81205 81214 . - . ID=id-AFQR01000020.1:81205..81214;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81542 81815 . - . ID=id-AFQR01000020.1:81542..81815;Dbxref=InterPro:IPR002579,PFAM:PF01641;Note=selr~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81575 81785 . - . ID=id-AFQR01000020.1:81575..81785;Dbxref=InterPro:IPR002579;Note=HAMAP:MF_01400~msrb~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81581 81803 . - . ID=id-AFQR01000020.1:81581..81803;Dbxref=InterPro:IPR002579,TIGRFAM:TIGR00357;Note=superfamily~tigr00357: methionine-r-sulfoxide reductase~methionine sulphoxide reductase b%3B label: SelR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81608 81797 . - . ID=id-AFQR01000020.1:81608..81797;Dbxref=InterPro:IPR011057;Note=superfamily:SSF51316~mss4-like~mss4-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81617 81788 . - . ID=id-AFQR01000020.1:81617..81788;Dbxref=InterPro:IPR002579;Note=Gene3D:2.170.150.20~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81644 81815 . - . ID=id-AFQR01000020.1:81644..81815;Dbxref=InterPro:IPR002579,PFAM:PF01641;Note=selr~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81677 81785 . - . ID=id-AFQR01000020.1:81677..81785;Dbxref=InterPro:IPR002579;Note=HAMAP:MF_01400~msrb~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81683 81803 . - . ID=id-AFQR01000020.1:81683..81803;Dbxref=InterPro:IPR002579,TIGRFAM:TIGR00357;Note=tigr00357: methionine-r-sulfoxide reductase~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81695 81794 . - . ID=id-AFQR01000020.1:81695..81794;Note=superfamily%3B label: SelR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81710 81797 . - . ID=id-AFQR01000020.1:81710..81797;Dbxref=InterPro:IPR011057;Note=superfamily:SSF51316~mss4-like~mss4-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 81719 81788 . - . ID=id-AFQR01000020.1:81719..81788;Dbxref=InterPro:IPR002579;Note=Gene3D:2.170.150.20~methionine sulphoxide reductase b;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 82246 82887 . + . ID=gene-GGE_1236;Name=GGE_1236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1236 GCA_000222085.2|AFQR01000020.1 Genbank CDS 82246 82887 . + 0 ID=cds-EGT81541.1;Parent=gene-GGE_1236;Dbxref=GeneID:1175806,InterPro:IPR003834,PFAM:PF02683,NCBI_GP:EGT81541.1;Name=EGT81541.1;Note=HI_1454;Ontology_term=GO:0017004,GO:0055114,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=cytochrome complex assembly|0017004||,oxidation-reduction process|0055114||;locus_tag=GGE_1236;product=Putative cytochrome c-type biogenesis protein;protein_id=EGT81541.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82276 82315 . + . ID=id-GGE_1236;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1236 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82279 82843 . + . ID=id-GGE_1236-2;Dbxref=InterPro:IPR003834,PFAM:PF02683;Note=dsbd~cytochrome c assembly protein%2C transmembrane domain;gbkey=misc_feature;locus_tag=GGE_1236 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82279 82795 . + . ID=id-GGE_1236-3;Note=superfamily%3B label: DsbD superfamily;gbkey=misc_feature;locus_tag=GGE_1236 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82276 82756 . - . ID=id-AFQR01000020.1:82276..82756;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82282 82477 . - . ID=id-AFQR01000020.1:82282..82477;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82291 82828 . - . ID=id-AFQR01000020.1:82291..82828;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82303 82828 . - . ID=id-AFQR01000020.1:82303..82828;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82315 82699 . - . ID=id-AFQR01000020.1:82315..82699;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82315 82603 . - . ID=id-AFQR01000020.1:82315..82603;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82315 82477 . - . ID=id-AFQR01000020.1:82315..82477;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82315 82396 . - . ID=id-AFQR01000020.1:82315..82396;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82315 82381 . - . ID=id-AFQR01000020.1:82315..82381;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 82930 83400 . + . ID=gene-GGE_1237;Name=GGE_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank CDS 82930 83400 . + 0 ID=cds-EGT81542.1;Parent=gene-GGE_1237;Dbxref=GeneID:3025138,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017936,PFAM:PF08534,NCBI_GP:EGT81542.1;Name=EGT81542.1;Note=HI_1453;Ontology_term=GO:0045454,GO:0006662,GO:0009055,GO:0016491,GO:0015035;gbkey=CDS;go_function=electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,glycerol ether metabolic process|0006662||;locus_tag=GGE_1237;product=putative thioredoxin-like protein;protein_id=EGT81542.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82930 83374 . + . ID=id-GGE_1237;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82954 83362 . + . ID=id-GGE_1237-2;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82978 83323 . + . ID=id-GGE_1237-3;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 82999 83221 . + . ID=id-GGE_1237-4;Dbxref=InterPro:IPR013740,PFAM:PF08534;Note=redoxin~redoxin;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83002 83290 . + . ID=id-GGE_1237-5;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83002 83101 . + . ID=id-GGE_1237-6;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438:SF102~subfamily not named~HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83113 83350 . + . ID=id-GGE_1237-7;Note=superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83119 83368 . + . ID=id-GGE_1237-8;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83119 83365 . + . ID=id-GGE_1237-9;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_1237 GCA_000222085.2|AFQR01000020.1 Genbank gene 83640 84557 . + . ID=gene-GGE_1238;Name=GGE_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1238 GCA_000222085.2|AFQR01000020.1 Genbank CDS 83640 84557 . + 0 ID=cds-EGT81543.1;Parent=gene-GGE_1238;Dbxref=GeneID:229844071,InterPro:IPR005642,PFAM:PF03956,NCBI_GP:EGT81543.1;Name=EGT81543.1;Note=ZP_04464212~CGSHi6P18H1_06526;gbkey=CDS;locus_tag=GGE_1238;product=Hypothetical protein;protein_id=EGT81543.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83652 83694 . + . ID=id-GGE_1238;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1238 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83658 84495 . + . ID=id-GGE_1238-2;Note=superfamily%3B label: DUF340 superfamily;gbkey=misc_feature;locus_tag=GGE_1238 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83985 84204 . + . ID=id-GGE_1238-3;Dbxref=InterPro:IPR005642,PFAM:PF03956;Note=duf340~protein of unknown function duf340%2C prokaryotic membrane;gbkey=misc_feature;locus_tag=GGE_1238 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84039 84114 . + . ID=id-GGE_1238-4;Dbxref=InterPro:IPR005642;Note=BlastProDom:PD022789~y1452_haein_p44201~protein of unknown function duf340%2C prokaryotic membrane;gbkey=misc_feature;locus_tag=GGE_1238 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83682 84513 . - . ID=id-AFQR01000020.1:83682..84513;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 84483 . - . ID=id-AFQR01000020.1:83709..84483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 84351 . - . ID=id-AFQR01000020.1:83709..84351;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 84264 . - . ID=id-AFQR01000020.1:83709..84264;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 84153 . - . ID=id-AFQR01000020.1:83709..84153;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 84051 . - . ID=id-AFQR01000020.1:83709..84051;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 83955 . - . ID=id-AFQR01000020.1:83709..83955;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 83829 . - . ID=id-AFQR01000020.1:83709..83829;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83709 83724 . - . ID=id-AFQR01000020.1:83709..83724;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 83898 83907 . - . ID=id-AFQR01000020.1:83898..83907;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 84625 84948 . - . ID=gene-GGE_1239;Name=GGE_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank CDS 84625 84948 . - 0 ID=cds-EGT81544.1;Parent=gene-GGE_1239;Dbxref=GeneID:1175803,InterPro:IPR007376,PFAM:PF04269,PIR:PIRSF004916,NCBI_GP:EGT81544.1;Name=EGT81544.1;Note=HI_1450;gbkey=CDS;locus_tag=GGE_1239;product=UPF0263 protein;protein_id=EGT81544.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84625 84946 . - . ID=id-GGE_1239;Dbxref=InterPro:IPR007376,PIR:PIRSF004916;Note=uncharacterised conserved protein%2C ucp004916 type~dsdna mimic%2C putative~superfamily:SSF102816~putative dsdna mimic~dsdna mimic%2C putative;gbkey=misc_feature;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84631 84943 . - . ID=id-GGE_1239-2;Note=superfamily%3B label: DUF440 superfamily;gbkey=misc_feature;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84637 84937 . - . ID=id-GGE_1239-3;Dbxref=InterPro:IPR007376;Note=HAMAP:MF_00680~upf0263~dsdna mimic%2C putative;gbkey=misc_feature;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84643 84931 . - . ID=id-GGE_1239-4;Dbxref=InterPro:IPR007376,PFAM:PF04269;Note=duf440~dsdna mimic%2C putative;gbkey=misc_feature;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84646 84928 . - . ID=id-GGE_1239-5;Dbxref=InterPro:IPR007376;Note=BlastProDom:PD020447~y1450_haein_p44199~dsdna mimic%2C putative;gbkey=misc_feature;locus_tag=GGE_1239 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 84980 84989 . + . ID=id-AFQR01000020.1:84980..84989;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 85017 85748 . - . ID=gene-GGE_1240;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank CDS 85017 85748 . - 0 ID=cds-EGT81545.1;Parent=gene-GGE_1240;Dbxref=GeneID:1170993,InterPro:IPR000594,InterPro:IPR007901,InterPro:IPR009036,InterPro:IPR012730,InterPro:IPR016040,PFAM:PF00899,PFAM:PF05237,TIGRFAM:TIGR02355,NCBI_GP:EGT81545.1;Name=EGT81545.1;Ontology_term=GO:0006777,GO:0008152,GO:0005488,GO:0003824;gbkey=CDS;gene=moeB;go_function=binding|0005488||,catalytic activity|0003824||;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||,metabolic process|0008152||;locus_tag=GGE_1240;product=Sulfur carrier protein moaD adenylyltransferase;protein_id=EGT81545.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85017 85740 . - . ID=id-GGE_1240;Note=multi-dom%3B label: PRK05690;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85023 85743 . - . ID=id-GGE_1240-2;Dbxref=InterPro:IPR009036;Note=superfamily:SSF69572~activating enzyme of the ubiquitin-like proteins~molybdenum cofactor biosynthesis%2C moeb;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85026 85734 . - . ID=id-GGE_1240-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85038 85713 . - . ID=id-GGE_1240-4;Note=HMMPanther:PTHR10953~ubiquitin-activating enzyme e1;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85041 85725 . - . ID=id-GGE_1240-5;Dbxref=InterPro:IPR012730,TIGRFAM:TIGR02355;Note=moeb: molybdopterin synthase sulfurylase moe~molybdopterin synthase sulfurylase moeb;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85050 85701 . - . ID=id-GGE_1240-6;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85110 85410 . - . ID=id-GGE_1240-7;Dbxref=InterPro:IPR000594,PFAM:PF00899;Note=thif~uba/thif-type nad/fad binding fold;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85111 85120 . - . ID=id-GGE_1240-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=moeB;locus_tag=GGE_1240 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85230 85524 . + . ID=id-AFQR01000020.1:85230..85524;Dbxref=InterPro:IPR007901,PFAM:PF05237;Note=moez_moeb~moez/moeb;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 85752 86966 . - . ID=gene-GGE_1241;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank CDS 85752 86966 . - 0 ID=cds-EGT81546.1;Parent=gene-GGE_1241;Dbxref=GeneID:1170992,InterPro:IPR001453,InterPro:IPR005110,InterPro:IPR005111,InterPro:IPR008284,InterPro:IPR020817,PFAM:PF00994,PFAM:PF03453,PFAM:PF03454,TIGRFAM:TIGR00177,NCBI_GP:EGT81546.1;Name=EGT81546.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||,molybdopterin cofactor biosynthetic process|0032324||;locus_tag=GGE_1241;product=Molybdopterin molybdenumtransferase;protein_id=EGT81546.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85752 86964 . - . ID=id-GGE_1241;Note=multi-dom%3B label: PRK10680;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85752 86934 . - . ID=id-GGE_1241-2;Note=HMMPanther:PTHR10192~molybdopterin biosynthesis protein;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85752 86268 . - . ID=id-GGE_1241-3;Dbxref=InterPro:IPR005110;Note=superfamily:SSF63882~moea n-terminal region -like~moea and linker domain;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85752 86241 . - . ID=id-GGE_1241-4;Dbxref=InterPro:IPR005110,PFAM:PF03453;Note=moea_n~moea and linker domain;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85767 86937 . - . ID=id-GGE_1241-5;Note=specific~superfamily%3B label: MoCF_BD superfamily;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85887 85998 . - . ID=id-GGE_1241-6;Note=Gene3D:2.170.190.11;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 86229 86247 . - . ID=id-GGE_1241-7;Dbxref=InterPro:IPR001453;Note=Gene3D:3.40.980.10~molybdopterin binding;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 86697 86706 . - . ID=id-GGE_1241-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=moeA;locus_tag=GGE_1241 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85848 86133 . + . ID=id-AFQR01000020.1:85848..86133;Note=Gene3D:3.90.105.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85854 86499 . + . ID=id-AFQR01000020.1:85854..86499;Dbxref=InterPro:IPR008284;Note=PatternScan:PS01079~mocf_biosynthesis_2~molybdenum cofactor biosynthesis%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85968 86727 . + . ID=id-AFQR01000020.1:85968..86727;Dbxref=InterPro:IPR005111;Note=Gene3D:2.40.340.10~moea%2C domain iv;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85971 86736 . + . ID=id-AFQR01000020.1:85971..86736;Dbxref=InterPro:IPR005111,PFAM:PF03454;Note=moea_c~moea%2C domain iv;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85988 85997 . + . ID=id-AFQR01000020.1:85988..85997;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 85998 86718 . + . ID=id-AFQR01000020.1:85998..86718;Dbxref=InterPro:IPR005111;Note=superfamily:SSF63867~moea c-terminal domain-like~moea%2C domain iv;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 86163 86280 . + . ID=id-AFQR01000020.1:86163..86280;Dbxref=InterPro:IPR001453,PFAM:PF00994;Note=mocf_biosynth~molybdopterin binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 86166 86268 . + . ID=id-AFQR01000020.1:86166..86268;Dbxref=InterPro:IPR020817,TIGRFAM:TIGR00177;Note=molyb_syn: molybdenum cofactor synthesis do~molybdenum cofactor synthesis;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 86199 86271 . + . ID=id-AFQR01000020.1:86199..86271;Dbxref=InterPro:IPR001453;Note=superfamily:SSF53218~molybdenum cofactor biosynthesis proteins~molybdopterin binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 87104 87760 . + . ID=gene-GGE_1242;Name=GGE_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank CDS 87104 87760 . + 0 ID=cds-EGT81547.1;Parent=gene-GGE_1242;Dbxref=GeneID:68250021,InterPro:IPR001474,InterPro:IPR018234,InterPro:IPR020602,PFAM:PF01227,TIGRFAM:TIGR00063,NCBI_GP:EGT81547.1;Name=EGT81547.1;Note=YP_249133;Ontology_term=GO:0046654,GO:0005737,GO:0003934;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=GTP cyclohydrolase I activity|0003934||;go_process=tetrahydrofolate biosynthetic process|0046654||;locus_tag=GGE_1242;product=GTP cyclohydrolase I;protein_id=EGT81547.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87110 87752 . + . ID=id-GGE_1242;Note=superfamily:SSF55620~tetrahydrobiopterin biosynthesis enzyme-like;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87125 87338 . + . ID=id-GGE_1242-2;Note=Gene3D:1.10.286.10;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87203 87662 . + . ID=id-GGE_1242-3;Note=specific~superfamily%3B label: GTP_cyclohydro1;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87203 87647 . + . ID=id-GGE_1242-4;Note=HMMPanther:PTHR11109~family not named;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87206 87656 . + . ID=id-GGE_1242-5;Dbxref=InterPro:IPR001474;Note=HAMAP:MF_00223~fole~gtp cyclohydrolase i;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87218 87647 . + . ID=id-GGE_1242-6;Dbxref=InterPro:IPR001474,TIGRFAM:TIGR00063;Note=fole: gtp cyclohydrolase i~gtp cyclohydrolase i;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87236 87626 . + . ID=id-GGE_1242-7;Note=multi-dom%3B label: PLN03044;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87371 87491 . + . ID=id-GGE_1242-8;Note=Gene3D:3.30.1130.10;gbkey=misc_feature;locus_tag=GGE_1242 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87137 87536 . - . ID=id-AFQR01000020.1:87137..87536;Dbxref=InterPro:IPR018234;Note=PatternScan:PS00860~gtp_cyclohydrol_1_2~gtp cyclohydrolase i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87155 87392 . - . ID=id-AFQR01000020.1:87155..87392;Dbxref=InterPro:IPR018234;Note=PatternScan:PS00859~gtp_cyclohydrol_1_1~gtp cyclohydrolase i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87356 87452 . - . ID=id-AFQR01000020.1:87356..87452;Dbxref=InterPro:IPR020602,PFAM:PF01227;Note=gtp_cyclohydroi~gtp cyclohydrolase i/nitrile oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87826 87835 . + . ID=id-AFQR01000020.1:87826..87835;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 87866 88948 . - . ID=gene-GGE_1243;Name=GGE_1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank CDS 87866 88948 . - 0 ID=cds-EGT81548.1;Parent=gene-GGE_1243;Dbxref=GeneID:1172560,InterPro:IPR001188,InterPro:IPR006059,PFAM:PF01547,NCBI_GP:EGT81548.1;Name=EGT81548.1;Note=potD-B;Ontology_term=GO:0006810,GO:0030288,GO:0005215;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1243;product=Spermidine/putrescine-binding periplasmic protein 1;protein_id=EGT81548.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87866 88946 . - . ID=id-GGE_1243;Note=superfamily~multi-dom%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87866 87926 . - . ID=id-GGE_1243-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87977 88835 . - . ID=id-GGE_1243-3;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87983 88223 . - . ID=id-GGE_1243-4;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 88001 88622 . - . ID=id-GGE_1243-5;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;locus_tag=GGE_1243 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87908 88178 . + . ID=id-AFQR01000020.1:87908..88178;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87911 88349 . + . ID=id-AFQR01000020.1:87911..88349;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87911 88130 . + . ID=id-AFQR01000020.1:87911..88130;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87917 88271 . + . ID=id-AFQR01000020.1:87917..88271;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87917 87995 . + . ID=id-AFQR01000020.1:87917..87995;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87926 88646 . + . ID=id-AFQR01000020.1:87926..88646;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87926 88514 . + . ID=id-AFQR01000020.1:87926..88514;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87926 88403 . + . ID=id-AFQR01000020.1:87926..88403;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87932 88043 . + . ID=id-AFQR01000020.1:87932..88043;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 87947 88781 . + . ID=id-AFQR01000020.1:87947..88781;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 88292 88340 . + . ID=id-AFQR01000020.1:88292..88340;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 89077 89847 . - . ID=gene-GGE_1244;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=GGE_1244 GCA_000222085.2|AFQR01000020.1 Genbank CDS 89077 89847 . - 0 ID=cds-EGT81549.1;Parent=gene-GGE_1244;Dbxref=GeneID:1172564,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT81549.1;Name=EGT81549.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=potC;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1244;product=Spermidine/putrescine transport system permease protein potC;protein_id=EGT81549.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89077 89842 . - . ID=id-GGE_1244;Note=Gene3D:1.10.3720.10~g3dsa:1.10.3720.10;gbkey=misc_feature;gene=potC;locus_tag=GGE_1244 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89254 89644 . - . ID=id-GGE_1244-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=potC;locus_tag=GGE_1244 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89302 89605 . - . ID=id-GGE_1244-3;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=potC;locus_tag=GGE_1244 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89305 89428 . - . ID=id-GGE_1244-4;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=potC;locus_tag=GGE_1244 GCA_000222085.2|AFQR01000020.1 Genbank gene 89847 90707 . - . ID=gene-GGE_1245;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank CDS 89847 90707 . - 0 ID=cds-EGT81550.1;Parent=gene-GGE_1245;Dbxref=GeneID:1172563,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT81550.1;Name=EGT81550.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=potB;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1245;product=Spermidine/putrescine transport system permease protein potB;protein_id=EGT81550.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89877 90666 . - . ID=id-GGE_1245;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=potB;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89886 89916 . - . ID=id-GGE_1245-2;Note=transmembrane_regions;gbkey=misc_feature;gene=potB;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90045 90474 . - . ID=id-GGE_1245-3;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=potB;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90048 90444 . - . ID=id-GGE_1245-4;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=potB;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90099 90447 . - . ID=id-GGE_1245-5;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=potB;locus_tag=GGE_1245 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89880 90147 . + . ID=id-AFQR01000020.1:89880..90147;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89907 90150 . + . ID=id-AFQR01000020.1:89907..90150;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89916 90600 . + . ID=id-AFQR01000020.1:89916..90600;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89916 90432 . + . ID=id-AFQR01000020.1:89916..90432;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89916 90303 . + . ID=id-AFQR01000020.1:89916..90303;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 89916 90048 . + . ID=id-AFQR01000020.1:89916..90048;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 90691 91836 . - . ID=gene-GGE_1246;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank CDS 90691 91836 . - 0 ID=cds-EGT81551.1;Parent=gene-GGE_1246;Dbxref=GeneID:146345487,InterPro:IPR003439,InterPro:IPR005893,InterPro:IPR008995,InterPro:IPR013611,InterPro:IPR017871,InterPro:IPR017879,PFAM:PF00005,PFAM:PF08402,TIGRFAM:TIGR01187,NCBI_GP:EGT81551.1;Name=EGT81551.1;Ontology_term=GO:0015846,GO:0006810,GO:0043190,GO:0016020,GO:0005524,GO:0016887,GO:0016820,GO:0015417,GO:0005215;gbkey=CDS;gene=potA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,polyamine-transporting ATPase activity|0015417||,transporter activity|0005215||;go_process=polyamine transport|0015846||,transport|0006810||;locus_tag=GGE_1246;product=Spermidine/putrescine import ATP-binding protein PotA;protein_id=EGT81551.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90709 91819 . - . ID=id-GGE_1246;Note=multi-dom%3B label: potA;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90730 91420 . - . ID=id-GGE_1246-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90742 91393 . - . ID=id-GGE_1246-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90745 91612 . - . ID=id-GGE_1246-4;Note=HMMPanther:PTHR24220:SF43~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90748 91762 . - . ID=id-GGE_1246-5;Dbxref=InterPro:IPR017879;Note=ProfileScan:PS51305~pota~abc transporter%2C spermidine/putrescine import atp-binding protein%2C pota;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90751 91387 . - . ID=id-GGE_1246-6;Note=specific~superfamily%3B label: ABC_PotA_N;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90751 91384 . - . ID=id-GGE_1246-7;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90841 91669 . - . ID=id-GGE_1246-8;Dbxref=InterPro:IPR005893,TIGRFAM:TIGR01187;Note=pota: polyamine abc transporter%2C atp-binding~spermidine/putrescine abc transporter atp-binding subunit;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90868 91045 . - . ID=id-GGE_1246-9;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=potA;locus_tag=GGE_1246 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90736 91141 . + . ID=id-AFQR01000020.1:90736..91141;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 90937 91573 . + . ID=id-AFQR01000020.1:90937..91573;Dbxref=InterPro:IPR013611,PFAM:PF08402;Note=superfamily~tobe_2~transport-associated ob%2C type 2%3B label: TOBE_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 91069 91447 . + . ID=id-AFQR01000020.1:91069..91447;Dbxref=InterPro:IPR008995;Note=superfamily:SSF50331~mop-like~molybdate/tungstate binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 91991 92000 . - . ID=id-AFQR01000020.1:91991..92000;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 92105 93343 . + . ID=gene-GGE_1247;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank CDS 92105 93343 . + 0 ID=cds-EGT81552.1;Parent=gene-GGE_1247;Dbxref=GeneID:81335439,InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010161,InterPro:IPR011650,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF037215,TIGRFAM:TIGR01882,NCBI_GP:EGT81552.1;Name=EGT81552.1;Ontology_term=GO:0008152,GO:0006518,GO:0006508,GO:0005737,GO:0016787,GO:0008237,GO:0045148,GO:0008270;gbkey=CDS;gene=pepT;go_component=cytoplasm|0005737||;go_function=hydrolase activity|0016787||,metallopeptidase activity|0008237||,tripeptide aminopeptidase activity|0045148||,zinc ion binding|0008270||;go_process=metabolic process|0008152||,peptide metabolic process|0006518||,proteolysis|0006508||;locus_tag=GGE_1247;product=Peptidase T;protein_id=EGT81552.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92111 93335 . + . ID=id-GGE_1247;Dbxref=InterPro:IPR010161,PIR:PIRSF037215;Note=peptidase t~peptidase m20b%2C tripeptide aminopeptidase;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92120 93317 . + . ID=id-GGE_1247-2;Note=HMMPanther:PTHR11014:SF3~peptidase t~HMMPanther:PTHR11014~family not named;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92126 93320 . + . ID=id-GGE_1247-3;Dbxref=InterPro:IPR010161,TIGRFAM:TIGR01882;Note=peptidase-t: peptidase t~peptidase m20b%2C tripeptide aminopeptidase;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92126 93317 . + . ID=id-GGE_1247-4;Dbxref=InterPro:IPR010161;Note=HAMAP:MF_00550~aminopeptidase_m20~peptidase m20b%2C tripeptide aminopeptidase;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92126 93311 . + . ID=id-GGE_1247-5;Note=superfamily~superfamily:SSF53187~zn-dependent exopeptidases%3B label: M20_dimer superfamily;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92132 93305 . + . ID=id-GGE_1247-6;Note=multi-dom%3B label: peptidase-T;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92540 92897 . + . ID=id-GGE_1247-7;Dbxref=InterPro:IPR002933,PFAM:PF01546;Note=peptidase_m20~peptidase m20;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92761 92770 . + . ID=id-GGE_1247-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=pepT;locus_tag=GGE_1247 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92135 92342 . - . ID=id-AFQR01000020.1:92135..92342;Dbxref=InterPro:IPR001261;Note=PatternScan:PS00758~arge_dape_cpg2_1~arge/dape/acy1/cpg2/yscs%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92222 92537 . - . ID=id-AFQR01000020.1:92222..92537;Dbxref=InterPro:IPR001261;Note=PatternScan:PS00759~arge_dape_cpg2_2~arge/dape/acy1/cpg2/yscs%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92354 93083 . - . ID=id-AFQR01000020.1:92354..93083;Note=Gene3D:3.40.630.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92393 92738 . - . ID=id-AFQR01000020.1:92393..92738;Dbxref=InterPro:IPR011650,PFAM:PF07687;Note=m20_dimer~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92438 92750 . - . ID=id-AFQR01000020.1:92438..92750;Note=Gene3D:3.30.70.360;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92444 92747 . - . ID=id-AFQR01000020.1:92444..92747;Dbxref=InterPro:IPR011650;Note=superfamily:SSF55031~bacterial exopeptidase dimerization domain~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 92569 92578 . - . ID=id-AFQR01000020.1:92569..92578;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 93493 94122 . - . ID=gene-GGE_1248;Name=GGE_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank CDS 93493 94122 . - 0 ID=cds-EGT81553.1;Parent=gene-GGE_1248;Dbxref=GeneID:325578271,InterPro:IPR013078,PFAM:PF00300,NCBI_GP:EGT81553.1;Name=EGT81553.1;Note=ZP_08148406;gbkey=CDS;locus_tag=GGE_1248;product=phosphoglycerate mutase;protein_id=EGT81553.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 93508 94105 . - . ID=id-GGE_1248;Note=superfamily:SSF53254~phosphoglycerate mutase-like;gbkey=misc_feature;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 93511 94102 . - . ID=id-GGE_1248-2;Note=Gene3D:3.40.50.1240;gbkey=misc_feature;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 93511 94078 . - . ID=id-GGE_1248-3;Note=specific~superfamily%3B label: HP superfamily;gbkey=misc_feature;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 93514 93952 . - . ID=id-GGE_1248-4;Dbxref=InterPro:IPR013078,PFAM:PF00300;Note=pgam~histidine phosphatase superfamily%2C clade-1;gbkey=misc_feature;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 93517 94096 . - . ID=id-GGE_1248-5;Note=HMMPanther:PTHR23029~family not named;gbkey=misc_feature;locus_tag=GGE_1248 GCA_000222085.2|AFQR01000020.1 Genbank gene 94213 95634 . - . ID=gene-GGE_1249;Name=GGE_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1249 GCA_000222085.2|AFQR01000020.1 Genbank CDS 94213 95634 . - 0 ID=cds-EGT81554.1;Parent=gene-GGE_1249;Dbxref=GeneID:1175810,InterPro:IPR003423,InterPro:IPR010131,PFAM:PF02321,TIGRFAM:TIGR01845,NCBI_GP:EGT81554.1;Name=EGT81554.1;Note=HI_1462;Ontology_term=GO:0006810,GO:0016020,GO:0008289,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=lipid binding|0008289||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1249;product=putative outer membrane efflux protein;protein_id=EGT81554.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94243 95599 . - . ID=id-GGE_1249;Note=superfamily:SSF56954~outer membrane efflux proteins (oep);gbkey=misc_feature;locus_tag=GGE_1249 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94288 95551 . - . ID=id-GGE_1249-2;Dbxref=InterPro:IPR010131,TIGRFAM:TIGR01845;Note=outer_nodt: efflux transporter%2C outer memb~rnd efflux system%2C outer membrane lipoprotein%2C nodt;gbkey=misc_feature;locus_tag=GGE_1249 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94318 95530 . - . ID=id-GGE_1249-3;Note=multi-dom%3B label: TolC;gbkey=misc_feature;locus_tag=GGE_1249 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94444 94768 . - . ID=id-GGE_1249-4;Dbxref=InterPro:IPR003423,PFAM:PF02321;Note=superfamily~oep~outer membrane efflux protein%3B label: OEP superfamily;gbkey=misc_feature;locus_tag=GGE_1249 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94264 94870 . + . ID=id-AFQR01000020.1:94264..94870;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94744 95083 . + . ID=id-AFQR01000020.1:94744..95083;Dbxref=InterPro:IPR003423,PFAM:PF02321;Note=oep~outer membrane efflux protein;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 94747 95083 . + . ID=id-AFQR01000020.1:94747..95083;Note=superfamily%3B label: OEP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95627 95636 . - . ID=id-AFQR01000020.1:95627..95636;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95657 96821 . - . ID=id-AFQR01000020.1:95657..96821;Note=multi-dom%3B label: PRK10535;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95693 96446 . + . ID=id-AFQR01000020.1:95693..96446;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95696 95726 . - . ID=id-AFQR01000020.1:95696..95726;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95696 95714 . + . ID=id-AFQR01000020.1:95696..95714;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95708 96620 . + . ID=id-AFQR01000020.1:95708..96620;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95726 96704 . + . ID=id-AFQR01000020.1:95726..96704;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95726 96593 . + . ID=id-AFQR01000020.1:95726..96593;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 95726 96458 . + . ID=id-AFQR01000020.1:95726..96458;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96170 96290 . + . ID=id-AFQR01000020.1:96170..96290;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96176 96284 . + . ID=id-AFQR01000020.1:96176..96284;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96859 96868 . + . ID=id-AFQR01000020.1:96859..96868;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96890 96899 . - . ID=id-AFQR01000020.1:96890..96899;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 96901 97134 . - . ID=gene-GGE_1250;Name=GGE_1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1250 GCA_000222085.2|AFQR01000020.1 Genbank CDS 96901 97134 . - 0 ID=cds-EGT81555.1;Parent=gene-GGE_1250;Dbxref=NCBI_GP:EGT81555.1;Name=EGT81555.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;gbkey=CDS;locus_tag=GGE_1250;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT81555.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96901 97132 . - . ID=id-GGE_1250;Note=HMMPanther:PTHR24220:SF32~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_1250 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96901 97117 . - . ID=id-GGE_1250-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1250 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96901 97111 . - . ID=id-GGE_1250-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1250 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 96901 97108 . - . ID=id-GGE_1250-4;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1250 GCA_000222085.2|AFQR01000020.1 Genbank gene 97177 97587 . - . ID=gene-GGE_1251;Name=GGE_1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank CDS 97177 97587 . - 0 ID=cds-EGT81556.1;Parent=gene-GGE_1251;Dbxref=InterPro:IPR003439,PFAM:PF00005,NCBI_GP:EGT81556.1;Name=EGT81556.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_1251;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT81556.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97177 97576 . - . ID=id-GGE_1251;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97183 97582 . - . ID=id-GGE_1251-2;Note=HMMPanther:PTHR24220:SF32~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97183 97579 . - . ID=id-GGE_1251-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97189 97576 . - . ID=id-GGE_1251-4;Note=specific~superfamily%3B label: ABC_MJ0796_Lo1CDE_FtsE;gbkey=misc_feature;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97318 97444 . - . ID=id-GGE_1251-5;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_1251 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97596 97605 . - . ID=id-AFQR01000020.1:97596..97605;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 97606 98787 . - . ID=gene-GGE_1252;Name=GGE_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank CDS 97606 98787 . - 0 ID=cds-EGT81557.1;Parent=gene-GGE_1252;Dbxref=GeneID:325578274,InterPro:IPR006143,PFAM:PF00529,TIGRFAM:TIGR01730,NCBI_GP:EGT81557.1;Name=EGT81557.1;Note=ZP_08148409;Ontology_term=GO:0009306,GO:0016020,GO:0008565;gbkey=CDS;go_component=membrane|0016020||;go_function=protein transporter activity|0008565||;go_process=protein secretion|0009306||;locus_tag=GGE_1252;product=macrolide-specific efflux protein MacA;protein_id=EGT81557.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97621 97666 . - . ID=id-GGE_1252;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97621 97660 . - . ID=id-GGE_1252-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97684 98674 . - . ID=id-GGE_1252-3;Note=multi-dom%3B label: PRK11578;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97702 98671 . - . ID=id-GGE_1252-4;Dbxref=InterPro:IPR006143,TIGRFAM:TIGR01730;Note=rnd_mfp: efflux transporter%2C rnd family%2C mfp~secretion protein hlyd;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97735 98422 . - . ID=id-GGE_1252-5;Note=superfamily:SSF111369~hlyd-like secretion proteins;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97774 97942 . - . ID=id-GGE_1252-6;Dbxref=InterPro:IPR006143,PFAM:PF00529;Note=hlyd~secretion protein hlyd;gbkey=misc_feature;locus_tag=GGE_1252 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97672 98395 . + . ID=id-AFQR01000020.1:97672..98395;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97714 98032 . + . ID=id-AFQR01000020.1:97714..98032;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97762 98083 . + . ID=id-AFQR01000020.1:97762..98083;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 97786 98152 . + . ID=id-AFQR01000020.1:97786..98152;Note=superfamily%3B label: Biotinyl_lipoyl_domains superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 98922 98931 . + . ID=id-AFQR01000020.1:98922..98931;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 99010 100680 . + . ID=gene-GGE_1253;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank CDS 99010 100680 . + 0 ID=cds-EGT81558.1;Parent=gene-GGE_1253;Dbxref=GeneID:81335445,InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004514,InterPro:IPR011035,InterPro:IPR014729,InterPro:IPR020056,InterPro:IPR020058,InterPro:IPR020059,InterPro:IPR020061,InterPro:IPR022861,PFAM:PF00749,PFAM:PF03950,TIGRFAM:TIGR00440,NCBI_GP:EGT81558.1;Name=EGT81558.1;Ontology_term=GO:0006425,GO:0043039,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004819,GO:0016876,GO:0000166;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,glutamine-tRNA ligase activity|0004819||,ligase activity forming aminoacyl-tRNA and related compounds|0016876||,nucleotide binding|0000166||;go_process=glutaminyl-tRNA aminoacylation|0006425||,tRNA aminoacylation|0043039||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1253;product=Glutaminyl-tRNA synthetase;protein_id=EGT81558.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99010 100678 . + . ID=id-GGE_1253;Dbxref=InterPro:IPR022861;Note=HAMAP:MF_00126~gln_trna_synth~glutaminyl-trna synthetase%2C bacterial;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99034 100657 . + . ID=id-GGE_1253-2;Note=multi-dom%3B label: PRK05347;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99034 100651 . + . ID=id-GGE_1253-3;Dbxref=InterPro:IPR000924;Note=HMMPanther:PTHR10119:SF15~glutaminyl-trna synthetase~HMMPanther:PTHR10119~glutamyl/glutaminyl-trna synthetase~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99058 100000 . + . ID=id-GGE_1253-4;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99112 99946 . + . ID=id-GGE_1253-5;Dbxref=InterPro:IPR020058,PFAM:PF00749;Note=trna-synt_1c~glutamyl/glutaminyl-trna synthetase%2C class ic%2C catalytic domain;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99115 100576 . + . ID=id-GGE_1253-6;Dbxref=InterPro:IPR004514,TIGRFAM:TIGR00440;Note=glns: glutaminyl-trna synthetase~glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99115 99295 . + . ID=id-GGE_1253-7;Note=superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99334 99337 . + . ID=id-GGE_1253-8;Note=Gene3D:3.90.800.10;gbkey=misc_feature;gene=glnS;locus_tag=GGE_1253 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99043 99661 . - . ID=id-AFQR01000020.1:99043..99661;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99046 99166 . - . ID=id-AFQR01000020.1:99046..99166;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99046 99133 . - . ID=id-AFQR01000020.1:99046..99133;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99049 99124 . - . ID=id-AFQR01000020.1:99049..99124;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99052 99211 . - . ID=id-AFQR01000020.1:99052..99211;Dbxref=InterPro:IPR000924;Note=FPrintScan:PR00987~trnasynthglu~glutamyl/glutaminyl-trna synthetase%2C class ic;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99169 99664 . - . ID=id-AFQR01000020.1:99169..99664;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99238 99823 . - . ID=id-AFQR01000020.1:99238..99823;Dbxref=InterPro:IPR020061;Note=Gene3D:1.10.1160.10~glutamyl/glutaminyl-trna synthetase%2C class ic%2C alpha-bundle domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99268 100417 . - . ID=id-AFQR01000020.1:99268..100417;Dbxref=InterPro:IPR020056;Note=Gene3D:2.40.240.10~ribosomal protein l25/gln-trna synthetase%2C beta-barrel domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99349 100078 . - . ID=id-AFQR01000020.1:99349..100078;Dbxref=InterPro:IPR020056;Note=Gene3D:2.40.240.10~ribosomal protein l25/gln-trna synthetase%2C beta-barrel domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99445 99628 . - . ID=id-AFQR01000020.1:99445..99628;Note=specific~superfamily%3B label: GlnRS_core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99571 100057 . - . ID=id-AFQR01000020.1:99571..100057;Dbxref=InterPro:IPR020059,PFAM:PF03950;Note=superfamily~trna-synt_1c_c~glutamyl/glutaminyl-trna synthetase%2C class ic%2C anti-codon binding domain%3B label: tRNA-synt_1c_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 99634 100054 . - . ID=id-AFQR01000020.1:99634..100054;Dbxref=InterPro:IPR011035;Note=superfamily:SSF50715~ribosomal protein l25-like~ribosomal protein l25/gln-trna synthetase%2C anti-codon-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 100720 100729 . - . ID=id-AFQR01000020.1:100720..100729;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 100746 101189 . + . ID=gene-GGE_1254;Name=GGE_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1254 GCA_000222085.2|AFQR01000020.1 Genbank CDS 100746 101189 . + 0 ID=cds-EGT81559.1;Parent=gene-GGE_1254;Dbxref=GeneID:1175741,InterPro:IPR008228,PIR:PIRSF006173,NCBI_GP:EGT81559.1;Name=EGT81559.1;Note=HI_1355;gbkey=CDS;locus_tag=GGE_1254;product=UPF0260 protein;protein_id=EGT81559.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 100746 101187 . + . ID=id-GGE_1254;Dbxref=InterPro:IPR008228,PIR:PIRSF006173;Note=uncharacterised conserved protein%2C ucp006173 type~uncharacterised conserved protein ucp006173;gbkey=misc_feature;locus_tag=GGE_1254 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 100764 101172 . + . ID=id-GGE_1254-2;Note=superfamily%3B label: UPF0153 superfamily;gbkey=misc_feature;locus_tag=GGE_1254 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 100939 100948 . + . ID=id-GGE_1254-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1254 GCA_000222085.2|AFQR01000020.1 Genbank gene 101302 103164 . + . ID=gene-GGE_1255;Name=GGE_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1255 GCA_000222085.2|AFQR01000020.1 Genbank CDS 101302 103164 . + 0 ID=cds-EGT81560.1;Parent=gene-GGE_1255;Dbxref=GeneID:319776358,NCBI_GP:EGT81560.1;Name=EGT81560.1;Note=YP_004138846;gbkey=CDS;locus_tag=GGE_1255;product=HMW1C%2C putative glycosyltransferase involved in glycosylation of HMW1A and HMW2A;protein_id=EGT81560.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 101605 103113 . + . ID=id-GGE_1255;Note=VFDB hit~VFDB:VFG1153~VFDB hit~VFDB:VFG1156;gbkey=misc_feature;locus_tag=GGE_1255 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 102067 102349 . - . ID=id-AFQR01000020.1:102067..102349;Note=multi-dom%3B label: Spy;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 103347 105437 . + . ID=gene-GGE_1256;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank CDS 103347 105437 . + 0 ID=cds-EGT81561.1;Parent=gene-GGE_1256;Dbxref=GeneID:1170869,InterPro:IPR003385,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF02446,TIGRFAM:TIGR00217,NCBI_GP:EGT81561.1;Name=EGT81561.1;Ontology_term=GO:0005975,GO:0004134,GO:0003824,GO:0043169;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||,catalytic activity|0003824||,cation binding|0043169||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_1256;product=4-alpha-glucanotransferase;protein_id=EGT81561.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103359 105420 . + . ID=id-GGE_1256;Note=multi-dom%3B label: malQ;gbkey=misc_feature;gene=malQ;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103659 105114 . + . ID=id-GGE_1256-2;Dbxref=InterPro:IPR003385,TIGRFAM:TIGR00217;Note=malq: 4-alpha-glucanotransferase~glycoside hydrolase%2C family 77;gbkey=misc_feature;gene=malQ;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103707 105072 . + . ID=id-GGE_1256-3;Dbxref=InterPro:IPR017853;Note=superfamily:SSF51445~(trans)glycosidases~glycoside hydrolase%2C superfamily;gbkey=misc_feature;gene=malQ;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103743 105030 . + . ID=id-GGE_1256-4;Note=superfamily%3B label: Glyco_hydro_77 superfamily;gbkey=misc_feature;gene=malQ;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103797 104970 . + . ID=id-GGE_1256-5;Dbxref=InterPro:IPR003385,PFAM:PF02446;Note=glyco_hydro_77~glycoside hydrolase%2C family 77;gbkey=misc_feature;gene=malQ;locus_tag=GGE_1256 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103386 103635 . - . ID=id-AFQR01000020.1:103386..103635;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 103551 105204 . - . ID=id-AFQR01000020.1:103551..105204;Dbxref=InterPro:IPR013781;Note=Gene3D:3.20.20.80~glycoside hydrolase%2C subgroup%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 105447 107636 . + . ID=gene-GGE_1257;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank CDS 105447 107636 . + 0 ID=cds-EGT81562.1;Parent=gene-GGE_1257;Dbxref=GeneID:1169910,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006048,InterPro:IPR006407,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015902,InterPro:IPR017853,PFAM:PF00128,PFAM:PF02806,PFAM:PF02922,TIGRFAM:TIGR01515,NCBI_GP:EGT81562.1;Name=EGT81562.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0003824,GO:0043169,GO:0004553;gbkey=CDS;gene=glgB;go_function=1 4-alpha-glucan branching enzyme activity|0003844||,catalytic activity|0003824||,cation binding|0043169||,hydrolase activity hydrolyzing O-glycosyl compounds|0004553||;go_process=carbohydrate metabolic process|0005975||,glycogen biosynthetic process|0005978||;locus_tag=GGE_1257;product=1%2C4-alpha-glucan-branching enzyme;protein_id=EGT81562.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105462 107613 . + . ID=id-GGE_1257;Note=multi-dom%3B label: PRK05402;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105489 105747 . + . ID=id-GGE_1257-2;Dbxref=InterPro:IPR014756;Note=superfamily:SSF81296~e set domains~immunoglobulin e-set;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105498 105708 . + . ID=id-GGE_1257-3;Dbxref=InterPro:IPR013783;Note=Gene3D:2.60.40.10~immunoglobulin-like fold;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105507 107568 . + . ID=id-GGE_1257-4;Dbxref=InterPro:IPR015902;Note=HMMPanther:PTHR10357:SF13~1%2C4-alpha-glucan branching enzyme~HMMPanther:PTHR10357~alpha-amylase~alpha amylase;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105750 107331 . + . ID=id-GGE_1257-5;Dbxref=InterPro:IPR006407;Note=HAMAP:MF_00685~glgb~1%2C4-alpha-glucan-branching enzyme;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105768 107307 . + . ID=id-GGE_1257-6;Dbxref=InterPro:IPR006407,TIGRFAM:TIGR01515;Note=branching_enzym: 1%2C4-alpha-glucan bra~1%2C4-alpha-glucan-branching enzyme;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 106128 106647 . + . ID=id-GGE_1257-7;Dbxref=InterPro:IPR017853;Note=superfamily:SSF51445~(trans)glycosidases~glycoside hydrolase%2C superfamily;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 106152 106587 . + . ID=id-GGE_1257-8;Dbxref=InterPro:IPR013781;Note=Gene3D:3.20.20.80~glycoside hydrolase%2C subgroup%2C catalytic core;gbkey=misc_feature;gene=glgB;locus_tag=GGE_1257 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105663 106266 . - . ID=id-AFQR01000020.1:105663..106266;Dbxref=InterPro:IPR006047,PFAM:PF00128;Note=alpha-amylase~glycosyl hydrolase%2C family 13%2C catalytic domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105696 105822 . - . ID=id-AFQR01000020.1:105696..105822;Dbxref=InterPro:IPR004193,PFAM:PF02922;Note=cbm_48~glycoside hydrolase%2C family 13;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105732 107349 . - . ID=id-AFQR01000020.1:105732..107349;Note=superfamily%3B label: Alpha-amylase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105741 107337 . - . ID=id-AFQR01000020.1:105741..107337;Dbxref=InterPro:IPR006048,PFAM:PF02806;Note=alpha-amylase_c~alpha-amylase all beta;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105756 107322 . - . ID=id-AFQR01000020.1:105756..107322;Dbxref=InterPro:IPR013780;Note=superfamily:SSF51011~glycosyl hydrolase domain~Gene3D:2.60.40.1180~glycosyl hydrolase%2C family 13%2C all-beta;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105765 105795 . - . ID=id-AFQR01000020.1:105765..105795;Note=specific~superfamily%3B label: E_set superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105771 105786 . - . ID=id-AFQR01000020.1:105771..105786;Dbxref=InterPro:IPR013783;Note=Gene3D:2.60.40.10~immunoglobulin-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105777 105798 . - . ID=id-AFQR01000020.1:105777..105798;Dbxref=InterPro:IPR014756;Note=superfamily:SSF81296~e set domains~immunoglobulin e-set;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 105930 106239 . - . ID=id-AFQR01000020.1:105930..106239;Note=superfamily%3B label: Alpha-amylase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 107640 109616 . + . ID=gene-GGE_1258;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank CDS 107640 109616 . + 0 ID=cds-EGT81563.1;Parent=gene-GGE_1258;Dbxref=InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR011837,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015902,InterPro:IPR017853,PFAM:PF00128,PFAM:PF02922,TIGRFAM:TIGR02100,NCBI_GP:EGT81563.1;Name=EGT81563.1;Ontology_term=GO:0005975,GO:0005980,GO:0003824,GO:0043169,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=catalytic activity|0003824||,cation binding|0043169||,glycogen debranching enzyme activity|0004133||,hydrolase activity hydrolyzing O-glycosyl compounds|0004553||;go_process=carbohydrate metabolic process|0005975||,glycogen catabolic process|0005980||;locus_tag=GGE_1258;product=Glycogen operon protein GlgX;protein_id=EGT81563.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107661 109593 . + . ID=id-GGE_1258;Dbxref=InterPro:IPR011837,TIGRFAM:TIGR02100;Note=glgx_debranch: glycogen debranching enz~glycogen debranching enzyme;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107661 109587 . + . ID=id-GGE_1258-2;Note=multi-dom%3B label: glgX_debranch;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107661 108045 . + . ID=id-GGE_1258-3;Dbxref=InterPro:IPR014756;Note=superfamily:SSF81296~e set domains~immunoglobulin e-set;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107664 109500 . + . ID=id-GGE_1258-4;Dbxref=InterPro:IPR015902;Note=HMMPanther:PTHR10357:SF74~glycogen debranching enzyme~HMMPanther:PTHR10357~alpha-amylase~alpha amylase;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107664 108006 . + . ID=id-GGE_1258-5;Dbxref=InterPro:IPR013783;Note=Gene3D:2.60.40.10~immunoglobulin-like fold;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107694 107976 . + . ID=id-GGE_1258-6;Note=specific~superfamily%3B label: E_set superfamily;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107706 107856 . + . ID=id-GGE_1258-7;Dbxref=InterPro:IPR004193,PFAM:PF02922;Note=cbm_48~glycoside hydrolase%2C family 13;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 108036 108963 . + . ID=id-GGE_1258-8;Dbxref=InterPro:IPR017853;Note=superfamily:SSF51445~(trans)glycosidases~glycoside hydrolase%2C superfamily;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 108039 108951 . + . ID=id-GGE_1258-9;Dbxref=InterPro:IPR013781;Note=Gene3D:3.20.20.80~glycoside hydrolase%2C subgroup%2C catalytic core;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 108159 108699 . + . ID=id-GGE_1258-10;Dbxref=InterPro:IPR006047,PFAM:PF00128;Note=alpha-amylase~glycosyl hydrolase%2C family 13%2C catalytic domain;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109101 109110 . + . ID=id-GGE_1258-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=glgX;locus_tag=GGE_1258 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107685 109005 . - . ID=id-AFQR01000020.1:107685..109005;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107832 109359 . - . ID=id-AFQR01000020.1:107832..109359;Note=superfamily:SSF51011~glycosyl hydrolase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107835 109368 . - . ID=id-AFQR01000020.1:107835..109368;Dbxref=InterPro:IPR013780;Note=Gene3D:2.60.40.1180~glycosyl hydrolase%2C family 13%2C all-beta;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 107889 108186 . - . ID=id-AFQR01000020.1:107889..108186;Note=superfamily%3B label: Alpha-amylase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109119 109128 . - . ID=id-AFQR01000020.1:109119..109128;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 109627 110940 . + . ID=gene-GGE_1259;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank CDS 109627 110940 . + 0 ID=cds-EGT81564.1;Parent=gene-GGE_1259;Dbxref=GeneID:118572435,InterPro:IPR005835,InterPro:IPR005836,InterPro:IPR011004,InterPro:IPR011831,InterPro:IPR023049,PFAM:PF00483,TIGRFAM:TIGR02091,NCBI_GP:EGT81564.1;Name=EGT81564.1;Ontology_term=GO:0009058,GO:0005978,GO:0008878,GO:0016779,GO:0016740;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||,nucleotidyltransferase activity|0016779||,transferase activity|0016740||;go_process=biosynthetic process|0009058||,glycogen biosynthetic process|0005978||;locus_tag=GGE_1259;product=Glucose-1-phosphate adenylyltransferase;protein_id=EGT81564.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109660 110884 . + . ID=id-GGE_1259;Note=multi-dom%3B label: glgC;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109675 110848 . + . ID=id-GGE_1259-2;Dbxref=InterPro:IPR023049;Note=HAMAP:MF_00624~glgc~glucose-1-phosphate adenylyltransferase glgc%2C bacterial;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109678 110809 . + . ID=id-GGE_1259-3;Note=HMMPanther:PTHR22572:SF10~glucose-1-phosphate adenylyltransferase~HMMPanther:PTHR22572~family not named;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109684 110764 . + . ID=id-GGE_1259-4;Dbxref=InterPro:IPR011831,TIGRFAM:TIGR02091;Note=glgc: glucose-1-phosphate adenylyltransferas~glucose-1-phosphate adenylyltransferase;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109684 110704 . + . ID=id-GGE_1259-5;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109693 110431 . + . ID=id-GGE_1259-6;Dbxref=InterPro:IPR005835,PFAM:PF00483;Note=ntp_transferase~nucleotidyl transferase;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109696 110392 . + . ID=id-GGE_1259-7;Note=specific~superfamily%3B label: ADP_Glucose_PP;gbkey=misc_feature;gene=glgC;locus_tag=GGE_1259 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109654 109963 . - . ID=id-AFQR01000020.1:109654..109963;Dbxref=InterPro:IPR005836;Note=PatternScan:PS00809~adp_glc_pyrophosph_2~adp-glucose pyrophosphorylase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109660 110260 . - . ID=id-AFQR01000020.1:109660..110260;Dbxref=InterPro:IPR005836;Note=PatternScan:PS00810~adp_glc_pyrophosph_3~adp-glucose pyrophosphorylase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109687 109702 . - . ID=id-AFQR01000020.1:109687..109702;Dbxref=InterPro:IPR005836;Note=PatternScan:PS00808~adp_glc_pyrophosph_1~adp-glucose pyrophosphorylase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109783 110632 . - . ID=id-AFQR01000020.1:109783..110632;Note=Gene3D:3.90.550.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109927 110572 . - . ID=id-AFQR01000020.1:109927..110572;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 109942 110584 . - . ID=id-AFQR01000020.1:109942..110584;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 110946 110955 . + . ID=id-AFQR01000020.1:110946..110955;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 110964 110973 . - . ID=id-AFQR01000020.1:110964..110973;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 111140 112570 . + . ID=gene-GGE_1260;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=GGE_1260 GCA_000222085.2|AFQR01000020.1 Genbank CDS 111140 112570 . + 0 ID=cds-EGT81565.1;Parent=gene-GGE_1260;Dbxref=InterPro:IPR001296,InterPro:IPR011835,InterPro:IPR013534,PFAM:PF00534,PFAM:PF08323,TIGRFAM:TIGR02095,NCBI_GP:EGT81565.1;Name=EGT81565.1;Ontology_term=GO:0009058,GO:0009250,GO:0009011;gbkey=CDS;gene=glgA;go_function=starch synthase activity|0009011||;go_process=biosynthetic process|0009058||,glucan biosynthetic process|0009250||;locus_tag=GGE_1260;product=Glycogen synthase;protein_id=EGT81565.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 111140 112568 . + . ID=id-GGE_1260;Dbxref=InterPro:IPR011835,TIGRFAM:TIGR02095;Note=multi-dom~HAMAP:MF_00484~glycogen_synth~glycogen/starch synthases%2C adp-glucose type~superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase~glga: glycogen/starch synthases%2C adp-glucose~glycogen/starch synthases%2C adp-glucose type~HMMPanther:PTHR12526:SF188~subfamily not named~HMMPanther:PTHR12526~family not named%3B label: glgA;gbkey=misc_feature;gene=glgA;locus_tag=GGE_1260 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 111146 112562 . + . ID=id-GGE_1260-2;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;gene=glgA;locus_tag=GGE_1260 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 111146 111836 . + . ID=id-GGE_1260-3;Dbxref=InterPro:IPR013534,PFAM:PF08323;Note=glyco_transf_5~starch synthase%2C catalytic domain;gbkey=misc_feature;gene=glgA;locus_tag=GGE_1260 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 111620 112007 . - . ID=id-AFQR01000020.1:111620..112007;Dbxref=InterPro:IPR001296,PFAM:PF00534;Note=glycos_transf_1~glycosyl transferase%2C group 1;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112131 112140 . - . ID=id-AFQR01000020.1:112131..112140;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 112811 115276 . + . ID=gene-GGE_1261;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank CDS 112811 115276 . + 0 ID=cds-EGT81566.1;Parent=gene-GGE_1261;Dbxref=GeneID:1172492,InterPro:IPR000811,InterPro:IPR011833,PFAM:PF00343,PIR:PIRSF000460,TIGRFAM:TIGR02093,NCBI_GP:EGT81566.1;Name=EGT81566.1;Ontology_term=GO:0005975,GO:0004645,GO:0030170;gbkey=CDS;gene=glgP;go_function=phosphorylase activity|0004645||,pyridoxal phosphate binding|0030170||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_1261;product=Glycogen phosphorylase;protein_id=EGT81566.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112832 115256 . + . ID=id-GGE_1261;Dbxref=InterPro:IPR000811,PIR:PIRSF000460;Note=glucan phosphorylase~glycosyl transferase%2C family 35;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112832 115253 . + . ID=id-GGE_1261-2;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112832 115250 . + . ID=id-GGE_1261-3;Note=multi-dom%3B label: PRK14986;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112856 114221 . + . ID=id-GGE_1261-4;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112865 115217 . + . ID=id-GGE_1261-5;Dbxref=InterPro:IPR000811;Note=HMMPanther:PTHR11468~family not named~glycosyl transferase%2C family 35;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112865 115202 . + . ID=id-GGE_1261-6;Dbxref=InterPro:IPR011833,TIGRFAM:TIGR02093;Note=p_ylase: glycogen/starch/alpha-glucan phosph~glycogen/starch/alpha-glucan phosphorylase;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112880 115187 . + . ID=id-GGE_1261-7;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 113129 114944 . + . ID=id-GGE_1261-8;Dbxref=InterPro:IPR000811,PFAM:PF00343;Note=phosphorylase~glycosyl transferase%2C family 35;gbkey=misc_feature;gene=glgP;locus_tag=GGE_1261 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112841 113186 . - . ID=id-AFQR01000020.1:112841..113186;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112847 114590 . - . ID=id-AFQR01000020.1:112847..114590;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112850 114788 . - . ID=id-AFQR01000020.1:112850..114788;Dbxref=InterPro:IPR000811;Note=PatternScan:PS00102~phosphorylase~glycosyl transferase%2C family 35;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 112853 113138 . - . ID=id-AFQR01000020.1:112853..113138;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 113756 114266 . - . ID=id-AFQR01000020.1:113756..114266;Note=Gene3D:3.40.50.2000;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 115457 117229 . + . ID=gene-GGE_1262;Name=GGE_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank CDS 115457 117229 . + 0 ID=cds-EGT81567.1;Parent=gene-GGE_1262;Dbxref=GeneID:315634212,InterPro:IPR005565,InterPro:IPR013686,PFAM:PF03865,PFAM:PF08479,NCBI_GP:EGT81567.1;Name=EGT81567.1;Note=ZP_07889501;gbkey=CDS;locus_tag=GGE_1262;product=ShlB family hemolysin secretion/activation protein;protein_id=EGT81567.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 115469 115511 . + . ID=id-GGE_1262;Note=seg;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 115535 115544 . + . ID=id-GGE_1262-2;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 115571 117116 . + . ID=id-GGE_1262-3;Note=multi-dom%3B label: FhaC;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 115694 115739 . + . ID=id-GGE_1262-4;Note=superfamily%3B label: Surf_Ag_VNR superfamily;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 116048 116483 . + . ID=id-GGE_1262-5;Dbxref=InterPro:IPR005565,PFAM:PF03865;Note=shlb~haemolysin activator hlyb;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 116051 116477 . + . ID=id-GGE_1262-6;Note=superfamily%3B label: Bac_surface_Ag superfamily;gbkey=misc_feature;locus_tag=GGE_1262 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 115610 115823 . - . ID=id-AFQR01000020.1:115610..115823;Dbxref=InterPro:IPR013686,PFAM:PF08479;Note=potra_2~polypeptide-transport-associated%2C shlb-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 117298 125328 . + . ID=gene-GGE_1263;Name=GGE_1263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1263 GCA_000222085.2|AFQR01000020.1 Genbank CDS 117298 125328 . + 0 ID=cds-EGT81568.1;Parent=gene-GGE_1263;Dbxref=InterPro:IPR008638,InterPro:IPR010069,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF05860,TIGRFAM:TIGR01731,TIGRFAM:TIGR01901,NCBI_GP:EGT81568.1;Name=EGT81568.1;Note=Hypothetical pectin lyase fold;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||;locus_tag=GGE_1263;product=putative pectin lyase fold-containing protein;protein_id=EGT81568.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117547 118201 . + . ID=id-GGE_1263;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_1263 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117547 117700 . + . ID=id-GGE_1263-2;Dbxref=InterPro:IPR008638,PFAM:PF05860;Note=haemagg_act~filamentous haemagglutinin%2C bacterial;gbkey=misc_feature;locus_tag=GGE_1263 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117550 117700 . + . ID=id-GGE_1263-3;Note=superfamily%3B label: Haemagg_act superfamily;gbkey=misc_feature;locus_tag=GGE_1263 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117553 118225 . + . ID=id-GGE_1263-4;Dbxref=InterPro:IPR012334;Note=Gene3D:2.160.20.10~pectin lyase fold;gbkey=misc_feature;locus_tag=GGE_1263 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117334 117970 . - . ID=id-AFQR01000020.1:117334..117970;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117337 120466 . - . ID=id-AFQR01000020.1:117337..120466;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117340 122374 . - . ID=id-AFQR01000020.1:117340..122374;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117343 119206 . - . ID=id-AFQR01000020.1:117343..119206;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117346 118150 . - . ID=id-AFQR01000020.1:117346..118150;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117349 119338 . - . ID=id-AFQR01000020.1:117349..119338;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117358 123940 . - . ID=id-AFQR01000020.1:117358..123940;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117364 124789 . - . ID=id-AFQR01000020.1:117364..124789;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117364 120592 . - . ID=id-AFQR01000020.1:117364..120592;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117412 119575 . - . ID=id-AFQR01000020.1:117412..119575;Dbxref=InterPro:IPR010069,TIGRFAM:TIGR01731;Note=fil_hemag_20aa: adhesin heca family~adhesin heca 20-residue repeat x2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117415 121750 . - . ID=id-AFQR01000020.1:117415..121750;Dbxref=InterPro:IPR010069,TIGRFAM:TIGR01731;Note=fil_hemag_20aa: adhesin heca family~adhesin heca 20-residue repeat x2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117424 118975 . - . ID=id-AFQR01000020.1:117424..118975;Dbxref=InterPro:IPR010069,TIGRFAM:TIGR01731;Note=fil_hemag_20aa: adhesin heca family~adhesin heca 20-residue repeat x2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117427 119326 . - . ID=id-AFQR01000020.1:117427..119326;Dbxref=InterPro:IPR010069,TIGRFAM:TIGR01731;Note=fil_hemag_20aa: adhesin heca family~adhesin heca 20-residue repeat x2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117435 117444 . - . ID=id-AFQR01000020.1:117435..117444;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117436 119101 . - . ID=id-AFQR01000020.1:117436..119101;Dbxref=InterPro:IPR010069,TIGRFAM:TIGR01731;Note=fil_hemag_20aa: adhesin heca family~adhesin heca 20-residue repeat x2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 117595 117643 . - . ID=id-AFQR01000020.1:117595..117643;Dbxref=InterPro:IPR008638,TIGRFAM:TIGR01901;Note=adhes_npxg: filamentous haemagglutinin~filamentous haemagglutinin%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 118615 120880 . - . ID=id-AFQR01000020.1:118615..120880;Note=multi-dom%3B label: FhaB;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 122181 122190 . - . ID=id-AFQR01000020.1:122181..122190;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 126136 126541 . - . ID=id-AFQR01000020.1:126136..126541;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127053 127227 . + . ID=id-GeneID:43580-3;Dbxref=GeneID:43580,GeneID:43581,GeneID:43582,GeneID:43592;Note=ISDB hit~ISDB hit~ISDB hit~ISDB hit~VFDB hit~VFDB:VFG0707~VFDB hit~VFDB:VFG0695;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127053 127226 . + . ID=id-GeneID:13027665-2;Dbxref=GeneID:13027665;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127058 127196 . + . ID=id-GeneID:33465460;Dbxref=GeneID:33465460;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127059 127226 . + . ID=id-AFQR01000020.1:127059..127226;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 127642 127905 . + . ID=gene-GGE_1264;Name=GGE_1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1264 GCA_000222085.2|AFQR01000020.1 Genbank CDS 127642 127905 . + 0 ID=cds-EGT81569.1;Parent=gene-GGE_1264;Dbxref=NCBI_GP:EGT81569.1;Name=EGT81569.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_1264;product=putative lipoprotein;protein_id=EGT81569.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127642 127687 . + . ID=id-GGE_1264;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1264 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 127708 127825 . - . ID=id-AFQR01000020.1:127708..127825;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 128663 128819 . - . ID=id-AFQR01000020.1:128663..128819;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 128714 128819 . - . ID=id-AFQR01000020.1:128714..128819;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129049 129097 . - . ID=id-AFQR01000020.1:129049..129097;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129359 129404 . + . ID=id-AFQR01000020.1:129359..129404;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129395 129464 . - . ID=id-AFQR01000020.1:129395..129464;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129413 129446 . - . ID=id-AFQR01000020.1:129413..129446;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129665 129674 . + . ID=id-AFQR01000020.1:129665..129674;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129711 129720 . - . ID=id-AFQR01000020.1:129711..129720;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129804 129876 . - . ID=id-AFQR01000020.1:129804..129876;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129822 131595 . - . ID=id-AFQR01000020.1:129822..131595;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129822 131271 . - . ID=id-AFQR01000020.1:129822..131271;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129825 130020 . - . ID=id-AFQR01000020.1:129825..130020;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129828 130218 . - . ID=id-AFQR01000020.1:129828..130218;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129834 131169 . - . ID=id-AFQR01000020.1:129834..131169;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129834 130506 . - . ID=id-AFQR01000020.1:129834..130506;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129834 130407 . - . ID=id-AFQR01000020.1:129834..130407;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 129960 131544 . - . ID=id-AFQR01000020.1:129960..131544;Dbxref=InterPro:IPR006914,PFAM:PF04829;Note=duf638~domain of unknown function duf638%2C haemagglutinin/hemolysin putative;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133238 133247 . - . ID=id-AFQR01000020.1:133238..133247;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 133595 135133 . + . ID=gene-GGE_1265;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank CDS 133595 135133 . + 0 ID=cds-EGT81570.1;Parent=gene-GGE_1265;Dbxref=GeneID:1172547,InterPro:IPR004571,InterPro:IPR007698,InterPro:IPR007886,InterPro:IPR008142,InterPro:IPR008143,InterPro:IPR016040,PFAM:PF01262,PFAM:PF05222,TIGRFAM:TIGR00561,NCBI_GP:EGT81570.1;Name=EGT81570.1;Ontology_term=GO:0008152,GO:0055114,GO:0015992,GO:0008750,GO:0005488,GO:0003824,GO:0016491;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||,binding|0005488||,catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,proton transport|0015992||;locus_tag=GGE_1265;product=NADP transhydrogenase subunit alpha;protein_id=EGT81570.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133595 135128 . + . ID=id-GGE_1265;Note=multi-dom~HMMPanther:PTHR10160~nad(p) transhydrogenase%3B label: pntA;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133595 134108 . + . ID=id-GGE_1265-2;Note=Gene3D:3.40.50.1770;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133595 134099 . + . ID=id-GGE_1265-3;Note=superfamily:SSF52283~formate/glycerate dehydrogenase catalytic domain-like;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133601 135128 . + . ID=id-GGE_1265-4;Dbxref=InterPro:IPR004571,TIGRFAM:TIGR00561;Note=pnta: nad(p)(+) transhydrogenase (ab-specifi~nad(p) transhydrogenase%2C alpha subunit;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133607 133994 . + . ID=id-GGE_1265-5;Dbxref=InterPro:IPR007886,PFAM:PF05222;Note=superfamily~aladh_pnt_n~alanine dehydrogenase/pnt%3B label: AlaDh_PNT_N superfamily;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133607 133676 . + . ID=id-GGE_1265-6;Dbxref=InterPro:IPR008142;Note=PatternScan:PS00836~aladh_pnt_1~alanine dehydrogenase/pyridine nucleotide transhydrogenase%2C conserved site-1;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 134006 134141 . + . ID=id-GGE_1265-7;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 134039 134087 . + . ID=id-GGE_1265-8;Dbxref=InterPro:IPR007698,PFAM:PF01262;Note=aladh_pnt_c~alanine dehydrogenase/pnt;gbkey=misc_feature;gene=pntA;locus_tag=GGE_1265 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133655 134864 . - . ID=id-AFQR01000020.1:133655..134864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133655 134795 . - . ID=id-AFQR01000020.1:133655..134795;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133664 135032 . - . ID=id-AFQR01000020.1:133664..135032;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133664 134936 . - . ID=id-AFQR01000020.1:133664..134936;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133664 134102 . - . ID=id-AFQR01000020.1:133664..134102;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133667 134111 . - . ID=id-AFQR01000020.1:133667..134111;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133670 134093 . - . ID=id-AFQR01000020.1:133670..134093;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 133673 134105 . - . ID=id-AFQR01000020.1:133673..134105;Dbxref=InterPro:IPR008143;Note=PatternScan:PS00837~aladh_pnt_2~alanine dehydrogenase/pyridine nucleotide transhydrogenase%2C conserved site-2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 134105 134183 . - . ID=id-AFQR01000020.1:134105..134183;Note=Gene3D:3.40.50.1770;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 135144 136568 . + . ID=gene-GGE_1266;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=GGE_1266 GCA_000222085.2|AFQR01000020.1 Genbank CDS 135144 136568 . + 0 ID=cds-EGT81571.1;Parent=gene-GGE_1266;Dbxref=GeneID:1172548,InterPro:IPR004003,InterPro:IPR012136,PFAM:PF02233,PIR:PIRSF000204,NCBI_GP:EGT81571.1;Name=EGT81571.1;Ontology_term=GO:0055114,GO:0016021,GO:0008750,GO:0008746,GO:0050661;gbkey=CDS;gene=pntB;go_component=integral to membrane|0016021||;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||,NAD(P)+ transhydrogenase activity|0008746||,NADP or NADPH binding|0050661||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1266;product=NADP transhydrogenase subunit beta;protein_id=EGT81571.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135144 136566 . + . ID=id-GGE_1266;Dbxref=InterPro:IPR012136,PIR:PIRSF000204;Note=superfamily~nad(p) transhydrogenase%2C beta subunit~nadp transhydrogenase%2C beta subunit~HMMPanther:PTHR10160:SF6~nad(p) transhydrogenase beta subunit~HMMPanther:PTHR10160~nad(p) transhydrogenase%3B label: PNTB superfamily;gbkey=misc_feature;gene=pntB;locus_tag=GGE_1266 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135159 136554 . + . ID=id-GGE_1266-2;Dbxref=InterPro:IPR004003,PFAM:PF02233;Note=pntb~nad(p) transhydrogenase%2C beta subunit;gbkey=misc_feature;gene=pntB;locus_tag=GGE_1266 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135159 135207 . + . ID=id-GGE_1266-3;Note=transmembrane_regions;gbkey=misc_feature;gene=pntB;locus_tag=GGE_1266 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135171 135504 . - . ID=id-AFQR01000020.1:135171..135504;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135180 135324 . - . ID=id-AFQR01000020.1:135180..135324;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135195 135681 . - . ID=id-AFQR01000020.1:135195..135681;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135198 135681 . - . ID=id-AFQR01000020.1:135198..135681;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135198 135312 . - . ID=id-AFQR01000020.1:135198..135312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135204 135903 . - . ID=id-AFQR01000020.1:135204..135903;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135204 135747 . - . ID=id-AFQR01000020.1:135204..135747;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135204 135240 . - . ID=id-AFQR01000020.1:135204..135240;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135213 135825 . - . ID=id-AFQR01000020.1:135213..135825;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135213 135552 . - . ID=id-AFQR01000020.1:135213..135552;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135213 135402 . - . ID=id-AFQR01000020.1:135213..135402;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135666 136047 . - . ID=id-AFQR01000020.1:135666..136047;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 135672 136041 . - . ID=id-AFQR01000020.1:135672..136041;Note=Gene3D:3.40.50.1220;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 136630 137547 . - . ID=gene-GGE_1267;Name=GGE_1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank CDS 136630 137547 . - 0 ID=cds-EGT81572.1;Parent=gene-GGE_1267;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT81572.1;Name=EGT81572.1;Note=HI_1364;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1267;product=putative winged helix-turn-helix transcription repressor DNA-binding protein;protein_id=EGT81572.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136630 137497 . - . ID=id-GGE_1267;Note=multi-dom%3B label: PRK14997;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136630 136807 . - . ID=id-GGE_1267-2;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136636 136897 . - . ID=id-GGE_1267-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136639 136879 . - . ID=id-GGE_1267-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136642 136807 . - . ID=id-GGE_1267-5;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136876 137266 . - . ID=id-GGE_1267-6;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136897 137230 . - . ID=id-GGE_1267-7;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136906 137221 . - . ID=id-GGE_1267-8;Note=specific~superfamily%3B label: PBP2_CrgA_like;gbkey=misc_feature;locus_tag=GGE_1267 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136873 137167 . + . ID=id-AFQR01000020.1:136873..137167;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 136891 136906 . + . ID=id-AFQR01000020.1:136891..136906;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 137643 140249 . + . ID=gene-GGE_1268;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank CDS 137643 140249 . + 0 ID=cds-EGT81573.1;Parent=gene-GGE_1268;Dbxref=GeneID:1174735,InterPro:IPR000380,InterPro:IPR005733,InterPro:IPR006171,InterPro:IPR013263,InterPro:IPR013497,InterPro:IPR013498,InterPro:IPR013824,InterPro:IPR013825,InterPro:IPR023405,InterPro:IPR023406,PFAM:PF01131,PFAM:PF01396,PFAM:PF01751,PFAM:PF08272,TIGRFAM:TIGR01051,NCBI_GP:EGT81573.1;Name=EGT81573.1;Ontology_term=GO:0006265,GO:0006268,GO:0005694,GO:0003677,GO:0003918,GO:0003916,GO:0003917;gbkey=CDS;gene=topA;go_component=chromosome|0005694||;go_function=DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||,DNA topoisomerase activity|0003916||,DNA topoisomerase type I activity|0003917||;go_process=DNA topological change|0006265||,DNA unwinding involved in replication|0006268||;locus_tag=GGE_1268;product=DNA topoisomerase 1;protein_id=EGT81573.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137643 140031 . + . ID=id-GGE_1268;Dbxref=InterPro:IPR000380;Note=HMMPanther:PTHR11390~family not named~dna topoisomerase%2C type ia;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137643 138147 . + . ID=id-GGE_1268-2;Note=Gene3D:3.40.50.140;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137649 139488 . + . ID=id-GGE_1268-3;Dbxref=InterPro:IPR023405;Note=superfamily:SSF56712~prokaryotic type i dna topoisomerase~dna topoisomerase%2C type ia%2C core domain;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137652 140193 . + . ID=id-GGE_1268-4;Note=multi-dom%3B label: PRK07561;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137652 138117 . + . ID=id-GGE_1268-5;Note=specific~superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137652 138075 . + . ID=id-GGE_1268-6;Dbxref=InterPro:IPR006171,PFAM:PF01751;Note=toprim~toprim domain;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137658 139560 . + . ID=id-GGE_1268-7;Dbxref=InterPro:IPR005733,TIGRFAM:TIGR01051;Note=topa_bact: dna topoisomerase i~dna topoisomerase i%2C bacterial-type;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 138132 138861 . + . ID=id-GGE_1268-8;Dbxref=InterPro:IPR013497,PFAM:PF01131;Note=topoisom_bac~dna topoisomerase%2C type ia%2C central;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 138138 138894 . + . ID=id-GGE_1268-9;Note=specific~superfamily%3B label: TOP1Ac;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 138423 138432 . + . ID=id-GGE_1268-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=topA;locus_tag=GGE_1268 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137673 138603 . - . ID=id-AFQR01000020.1:137673..138603;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137679 137817 . - . ID=id-AFQR01000020.1:137679..137817;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137685 137979 . - . ID=id-AFQR01000020.1:137685..137979;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137688 139131 . - . ID=id-AFQR01000020.1:137688..139131;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137688 138588 . - . ID=id-AFQR01000020.1:137688..138588;Dbxref=InterPro:IPR023406;Note=PatternScan:PS00396~topoisomerase_i_prok~dna topoisomerase%2C type ia%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137694 138831 . - . ID=id-AFQR01000020.1:137694..138831;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137700 138234 . - . ID=id-AFQR01000020.1:137700..138234;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137709 137811 . - . ID=id-AFQR01000020.1:137709..137811;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137721 139452 . - . ID=id-AFQR01000020.1:137721..139452;Dbxref=InterPro:IPR013498,PFAM:PF01396;Note=zf-c4_topoisom~dna topoisomerase%2C type ia%2C zn finger;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137748 139446 . - . ID=id-AFQR01000020.1:137748..139446;Note=Gene3D:3.30.65.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137751 139782 . - . ID=id-AFQR01000020.1:137751..139782;Dbxref=InterPro:IPR013498,PFAM:PF01396;Note=superfamily~zf-c4_topoisom~dna topoisomerase%2C type ia%2C zn finger%3B label: zf-C4_Topoisom superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137760 139923 . - . ID=id-AFQR01000020.1:137760..139923;Note=superfamily%3B label: Topo_Zn_Ribbon superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137763 140124 . - . ID=id-AFQR01000020.1:137763..140124;Note=superfamily%3B label: Topo_Zn_Ribbon superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137763 139923 . - . ID=id-AFQR01000020.1:137763..139923;Dbxref=InterPro:IPR013263,PFAM:PF08272;Note=topo_zn_ribbon~dna topoisomerase i%2C zinc ribbon-like%2C bacterial-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137766 139449 . - . ID=id-AFQR01000020.1:137766..139449;Note=superfamily%3B label: zf-C4_Topoisom superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137769 140124 . - . ID=id-AFQR01000020.1:137769..140124;Dbxref=InterPro:IPR013263,PFAM:PF08272;Note=topo_zn_ribbon~dna topoisomerase i%2C zinc ribbon-like%2C bacterial-type;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137793 139734 . - . ID=id-AFQR01000020.1:137793..139734;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137814 140079 . - . ID=id-AFQR01000020.1:137814..140079;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137817 140076 . - . ID=id-AFQR01000020.1:137817..140076;Note=Gene3D:2.20.25.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137832 139884 . - . ID=id-AFQR01000020.1:137832..139884;Note=Gene3D:3.30.65.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137838 139884 . - . ID=id-AFQR01000020.1:137838..139884;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137838 139401 . - . ID=id-AFQR01000020.1:137838..139401;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 137976 139062 . - . ID=id-AFQR01000020.1:137976..139062;Dbxref=InterPro:IPR013824;Note=Gene3D:1.10.460.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 138000 138306 . - . ID=id-AFQR01000020.1:138000..138306;Dbxref=InterPro:IPR013825;Note=Gene3D:2.70.20.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 138030 138675 . - . ID=id-AFQR01000020.1:138030..138675;Dbxref=InterPro:IPR013825;Note=Gene3D:2.70.20.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140254 140263 . + . ID=id-AFQR01000020.1:140254..140263;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140269 140278 . - . ID=id-AFQR01000020.1:140269..140278;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 140321 140902 . - . ID=gene-GGE_1269;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank CDS 140321 140902 . - 0 ID=cds-EGT81574.1;Parent=gene-GGE_1269;Dbxref=GeneID:166991254,InterPro:IPR003680,InterPro:IPR023048,PFAM:PF02525,NCBI_GP:EGT81574.1;Name=EGT81574.1;Ontology_term=GO:0055114,GO:0050662,GO:0009055,GO:0016661,GO:0016491;gbkey=CDS;gene=azoR;go_function=coenzyme binding|0050662||,electron carrier activity|0009055||,oxidoreductase activity acting on other nitrogenous compounds as donors|0016661||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1269;product=FMN-dependent NADH-azoreductase;protein_id=EGT81574.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140321 140897 . - . ID=id-GGE_1269;Note=superfamily%3B label: FMN_red superfamily;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140321 140894 . - . ID=id-GGE_1269-2;Note=superfamily:SSF52218~flavoproteins;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140321 140891 . - . ID=id-GGE_1269-3;Note=Gene3D:3.40.50.360;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140321 140888 . - . ID=id-GGE_1269-4;Note=HMMPanther:PTHR10204:SF4~fmn-dependent nadh-azoreductase~HMMPanther:PTHR10204~nad(p)h oxidoreductase-related;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140327 140888 . - . ID=id-GGE_1269-5;Dbxref=InterPro:IPR023048;Note=HAMAP:MF_01216~azoreductase_type1~nadh-azoreductase%2C fmn-dependent;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 140330 140879 . - . ID=id-GGE_1269-6;Dbxref=InterPro:IPR003680,PFAM:PF02525;Note=flavodoxin_2~flavodoxin-like fold;gbkey=misc_feature;gene=azoR;locus_tag=GGE_1269 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141108 141117 . + . ID=id-AFQR01000020.1:141108..141117;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 141188 143119 . + . ID=gene-GGE_1270;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank CDS 141188 143119 . + 0 ID=cds-EGT81575.1;Parent=gene-GGE_1270;Dbxref=GeneID:1174548,InterPro:IPR002314,InterPro:IPR002320,InterPro:IPR004095,InterPro:IPR004154,InterPro:IPR006195,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR012947,InterPro:IPR018163,PFAM:PF00587,PFAM:PF02824,PFAM:PF03129,PFAM:PF07973,TIGRFAM:TIGR00418,NCBI_GP:EGT81575.1;Name=EGT81575.1;Ontology_term=GO:0043039,GO:0006418,GO:0006435,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0016876,GO:0000166,GO:0004829;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,ligase activity forming aminoacyl-tRNA and related compounds|0016876||,nucleotide binding|0000166||,threonine-tRNA ligase activity|0004829||;go_process=tRNA aminoacylation|0043039||,tRNA aminoacylation for protein translation|0006418||,threonyl-tRNA aminoacylation|0006435||,translation|0006412||;locus_tag=GGE_1270;product=Threonyl-tRNA synthetase;protein_id=EGT81575.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141188 143102 . + . ID=id-GGE_1270;Note=multi-dom%3B label: thrS;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141188 141380 . + . ID=id-GGE_1270-2;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141194 141371 . + . ID=id-GGE_1270-3;Dbxref=InterPro:IPR012676;Note=superfamily:SSF81271~tgs-like~tgs-like;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141200 143105 . + . ID=id-GGE_1270-4;Note=HMMPanther:PTHR11451:SF5~threonyl-trna synthetase~HMMPanther:PTHR11451~family not named;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141200 141365 . + . ID=id-GGE_1270-5;Note=specific~superfamily%3B label: TGS superfamily;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141200 141362 . + . ID=id-GGE_1270-6;Dbxref=InterPro:IPR004095,PFAM:PF02824;Note=tgs~tgs;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141377 141725 . + . ID=id-GGE_1270-7;Dbxref=InterPro:IPR018163;Note=superfamily:SSF55186~thrrs/alars common domain~threonyl/alanyl trna synthetase%2C class ii-like%2C putative editing domain;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141404 142871 . + . ID=id-GGE_1270-8;Dbxref=InterPro:IPR002320,TIGRFAM:TIGR00418;Note=thrs: threonyl-trna synthetase~threonyl-trna synthetase%2C class iia;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141914 142082 . + . ID=id-GGE_1270-9;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141914 142061 . + . ID=id-GGE_1270-10;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141914 142055 . + . ID=id-GGE_1270-11;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141917 142064 . + . ID=id-GGE_1270-12;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=thrS;locus_tag=GGE_1270 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141218 142499 . - . ID=id-AFQR01000020.1:141218..142499;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141227 142790 . - . ID=id-AFQR01000020.1:141227..142790;Dbxref=InterPro:IPR002320;Note=FPrintScan:PR01047~trnasynththr~threonyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141230 142709 . - . ID=id-AFQR01000020.1:141230..142709;Dbxref=InterPro:IPR002320;Note=FPrintScan:PR01047~trnasynththr~threonyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141260 142274 . - . ID=id-AFQR01000020.1:141260..142274;Dbxref=InterPro:IPR002320;Note=FPrintScan:PR01047~trnasynththr~threonyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141275 142580 . - . ID=id-AFQR01000020.1:141275..142580;Dbxref=InterPro:IPR002320;Note=FPrintScan:PR01047~trnasynththr~threonyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141275 142175 . - . ID=id-AFQR01000020.1:141275..142175;Dbxref=InterPro:IPR002320;Note=FPrintScan:PR01047~trnasynththr~threonyl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141299 141752 . - . ID=id-AFQR01000020.1:141299..141752;Note=Gene3D:3.30.980.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141314 141722 . - . ID=id-AFQR01000020.1:141314..141722;Note=superfamily%3B label: tRNA_SAD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141329 141707 . - . ID=id-AFQR01000020.1:141329..141707;Dbxref=InterPro:IPR012947,PFAM:PF07973;Note=trna_sad~threonyl/alanyl trna synthetase%2C sad;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141359 141581 . - . ID=id-AFQR01000020.1:141359..141581;Note=Gene3D:3.30.54.20;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141458 142811 . - . ID=id-AFQR01000020.1:141458..142811;Dbxref=InterPro:IPR004154,PFAM:PF03129;Note=hgtp_anticodon~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141461 142805 . - . ID=id-AFQR01000020.1:141461..142805;Note=specific~superfamily%3B label: HGTP_anticodon superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141518 142787 . - . ID=id-AFQR01000020.1:141518..142787;Dbxref=InterPro:IPR004154;Note=superfamily:SSF52954~class ii aars abd-related~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141521 142781 . - . ID=id-AFQR01000020.1:141521..142781;Dbxref=InterPro:IPR004154;Note=Gene3D:3.40.50.800~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 141674 142010 . - . ID=id-AFQR01000020.1:141674..142010;Dbxref=InterPro:IPR002314,PFAM:PF00587;Note=trna-synt_2b~aminoacyl-trna synthetase%2C class ii (g/ h/ p/ s)%2C conserved domain;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 143242 146022 . - . ID=gene-GGE_1271;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank CDS 143242 146022 . - 0 ID=cds-EGT81576.1;Parent=gene-GGE_1271;Dbxref=GeneID:1175759,InterPro:IPR001431,InterPro:IPR007863,InterPro:IPR011237,InterPro:IPR011249,InterPro:IPR011765,PFAM:PF00675,PFAM:PF05193,NCBI_GP:EGT81576.1;Name=EGT81576.1;Ontology_term=GO:0006508,GO:0003824,GO:0046872,GO:0004222,GO:0008270;gbkey=CDS;gene=pqqL;go_function=catalytic activity|0003824||,metal ion binding|0046872||,metalloendopeptidase activity|0004222||,zinc ion binding|0008270||;go_process=proteolysis|0006508||;locus_tag=GGE_1271;product=Putative zinc protease pqqL;protein_id=EGT81576.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143242 143293 . - . ID=id-GGE_1271;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143284 143953 . - . ID=id-GGE_1271-2;Dbxref=InterPro:IPR011249;Note=superfamily:SSF63411~luxs/mpp-like metallohydrolase~metalloenzyme%2C luxs/m16 peptidase-like%2C metal-binding;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143326 145801 . - . ID=id-GGE_1271-3;Note=HMMPanther:PTHR11851:SF63~zinc protease-related~HMMPanther:PTHR11851~family not named;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143326 144502 . - . ID=id-GGE_1271-4;Note=multi-dom%3B label: PqqL;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143338 143887 . - . ID=id-GGE_1271-5;Dbxref=InterPro:IPR011237;Note=Gene3D:3.30.830.10~peptidase m16%2C core;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143377 143608 . - . ID=id-GGE_1271-6;Note=superfamily%3B label: Peptidase_M16 superfamily;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143380 143629 . - . ID=id-GGE_1271-7;Dbxref=InterPro:IPR011765,PFAM:PF00675;Note=peptidase_m16~peptidase m16;gbkey=misc_feature;gene=pqqL;locus_tag=GGE_1271 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143269 144589 . + . ID=id-AFQR01000020.1:143269..144589;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143314 143440 . + . ID=id-AFQR01000020.1:143314..143440;Dbxref=InterPro:IPR001431;Note=PatternScan:PS00143~insulinase~peptidase m16%2C zinc-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143746 145291 . + . ID=id-AFQR01000020.1:143746..145291;Dbxref=InterPro:IPR007863,PFAM:PF05193;Note=peptidase_m16_c~peptidase m16;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143755 145282 . + . ID=id-AFQR01000020.1:143755..145282;Note=superfamily%3B label: Peptidase_M16_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143785 143860 . + . ID=id-AFQR01000020.1:143785..143860;Dbxref=InterPro:IPR007863,PFAM:PF05193;Note=peptidase_m16_c~peptidase m16;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143794 143857 . + . ID=id-AFQR01000020.1:143794..143857;Note=superfamily%3B label: Peptidase_M16_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143809 145447 . + . ID=id-AFQR01000020.1:143809..145447;Dbxref=InterPro:IPR011249;Note=superfamily:SSF63411~luxs/mpp-like metallohydrolase~metalloenzyme%2C luxs/m16 peptidase-like%2C metal-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143872 144796 . + . ID=id-AFQR01000020.1:143872..144796;Dbxref=InterPro:IPR011237;Note=Gene3D:3.30.830.10~peptidase m16%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 143953 144739 . + . ID=id-AFQR01000020.1:143953..144739;Dbxref=InterPro:IPR011249;Note=superfamily:SSF63411~luxs/mpp-like metallohydrolase~metalloenzyme%2C luxs/m16 peptidase-like%2C metal-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 144457 144796 . + . ID=id-AFQR01000020.1:144457..144796;Note=multi-dom%3B label: PqqL;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146000 146009 . + . ID=id-AFQR01000020.1:146000..146009;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 146125 148509 . - . ID=gene-GGE_1272;Name=GGE_1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank CDS 146125 148509 . - 0 ID=cds-EGT81577.1;Parent=gene-GGE_1272;Dbxref=InterPro:IPR000531,InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT81577.1;Name=EGT81577.1;Note=HI_1369;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1272;product=putative tonB-dependent receptor%2C plug;protein_id=EGT81577.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146131 148504 . - . ID=id-GGE_1272;Note=multi-dom%3B label: FepA;gbkey=misc_feature;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146176 148459 . - . ID=id-GGE_1272-2;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146254 146512 . - . ID=id-GGE_1272-3;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146260 146527 . - . ID=id-GGE_1272-4;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 146269 148366 . - . ID=id-GGE_1272-5;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_1272 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 147139 147496 . + . ID=id-AFQR01000020.1:147139..147496;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148635 148644 . + . ID=id-AFQR01000020.1:148635..148644;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 148675 148884 . - . ID=gene-GGE_1273;Name=GGE_1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1273 GCA_000222085.2|AFQR01000020.1 Genbank CDS 148675 148884 . - 0 ID=cds-EGT81578.1;Parent=gene-GGE_1273;Dbxref=GeneID:1170996,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,PFAM:PF03459,TIGRFAM:TIGR00638,NCBI_GP:EGT81578.1;Name=EGT81578.1;Note=HI_1370;Ontology_term=GO:0006810,GO:0043190,GO:0005524,GO:0016820,GO:0015412,GO:0030151,GO:0005215;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||;go_function=ATP binding|0005524||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,molybdate transmembrane-transporting ATPase activity|0015412||,molybdenum ion binding|0030151||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1273;product=Putative molybdenum-pterin-binding protein;protein_id=EGT81578.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148675 148882 . - . ID=id-GGE_1273;Dbxref=InterPro:IPR004606,InterPro:IPR008995,TIGRFAM:TIGR00638;Note=superfamily~superfamily:SSF50331~mop-like~molybdate/tungstate binding~mop: molybdenum-pterin binding domain~molybdenum-pterin binding~Gene3D:2.40.50.100%3B label: TOBE_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1273 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148687 148864 . - . ID=id-GGE_1273-2;Dbxref=InterPro:IPR005116,PFAM:PF03459;Note=tobe~transport-associated ob%2C type 1;gbkey=misc_feature;locus_tag=GGE_1273 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148982 148991 . - . ID=id-AFQR01000020.1:148982..148991;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 148992 149321 . - . ID=gene-GGE_1274;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=GGE_1274 GCA_000222085.2|AFQR01000020.1 Genbank CDS 148992 149321 . - 0 ID=cds-EGT81579.1;Parent=gene-GGE_1274;Dbxref=GeneID:1175638,InterPro:IPR007453,PFAM:PF04358,TIGRFAM:TIGR03342,NCBI_GP:EGT81579.1;Name=EGT81579.1;gbkey=CDS;gene=tusE;locus_tag=GGE_1274;product=Sulfurtransferase tusE;protein_id=EGT81579.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148992 149319 . - . ID=id-GGE_1274;Dbxref=InterPro:IPR007453;Note=superfamily~superfamily:SSF69721~dsrc%2C the gamma subunit of dissimilatory sulfite reductase~dsrc-like protein%3B label: DsrC superfamily;gbkey=misc_feature;gene=tusE;locus_tag=GGE_1274 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148992 149109 . - . ID=id-GGE_1274-2;Note=Gene3D:3.30.1420.10;gbkey=misc_feature;gene=tusE;locus_tag=GGE_1274 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 148998 149316 . - . ID=id-GGE_1274-3;Dbxref=InterPro:IPR007453,PFAM:PF04358,TIGRFAM:TIGR03342;Note=dsrc_tuse_dsvc: sulfur relay protein%2C~dsrc-like protein~dsrc~dsrc-like protein;gbkey=misc_feature;gene=tusE;locus_tag=GGE_1274 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149112 149202 . - . ID=id-GGE_1274-4;Dbxref=InterPro:IPR007453;Note=Gene3D:1.10.10.370~dsrc-like protein;gbkey=misc_feature;gene=tusE;locus_tag=GGE_1274 GCA_000222085.2|AFQR01000020.1 Genbank gene 149323 150264 . - . ID=gene-GGE_1275;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank CDS 149323 150264 . - 0 ID=cds-EGT81580.1;Parent=gene-GGE_1275;Dbxref=GeneID:2495599,InterPro:IPR011063,InterPro:IPR012089,InterPro:IPR014729,PFAM:PF01171,PIR:PIRSF004976,NCBI_GP:EGT81580.1;Name=EGT81580.1;Ontology_term=GO:0008033,GO:0005524;gbkey=CDS;gene=ttcA;go_function=ATP binding|0005524||;go_process=tRNA processing|0008033||;locus_tag=GGE_1275;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=EGT81580.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149338 150151 . - . ID=id-GGE_1275;Dbxref=InterPro:IPR012089,PIR:PIRSF004976;Note=predicted pp-loop atpase%2C ydao type~2-thiocytidine trna biosynthesis protein%2C ttca;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149353 150061 . - . ID=id-GGE_1275-2;Note=HMMPanther:PTHR11807:SF4~atpases of the pp superfamily~HMMPanther:PTHR11807~family not named;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149362 150109 . - . ID=id-GGE_1275-3;Dbxref=InterPro:IPR012089;Note=HAMAP:MF_01850~ttca~2-thiocytidine trna biosynthesis protein%2C ttca;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149365 150097 . - . ID=id-GGE_1275-4;Note=multi-dom%3B label: PRK10696;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149380 149986 . - . ID=id-GGE_1275-5;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149389 149890 . - . ID=id-GGE_1275-6;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149455 149851 . - . ID=id-GGE_1275-7;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 149455 149818 . - . ID=id-GGE_1275-8;Dbxref=InterPro:IPR011063,PFAM:PF01171;Note=atp_bind_3~trna(ile)-lysidine/2-thiocytidine synthase;gbkey=misc_feature;gene=ttcA;locus_tag=GGE_1275 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150317 150326 . + . ID=id-AFQR01000020.1:150317..150326;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 150414 151748 . + . ID=gene-GGE_1276;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=GGE_1276 GCA_000222085.2|AFQR01000020.1 Genbank CDS 150414 151748 . + 0 ID=cds-EGT81581.1;Parent=gene-GGE_1276;Dbxref=GeneID:167017264,InterPro:IPR005582,PFAM:PF03882,PIR:PIRSF018282,NCBI_GP:EGT81581.1;Name=EGT81581.1;Ontology_term=GO:0006260,GO:0007059,GO:0005737,GO:0005509;gbkey=CDS;gene=mukF;go_component=cytoplasm|0005737||;go_function=calcium ion binding|0005509||;go_process=DNA replication|0006260||,chromosome segregation|0007059||;locus_tag=GGE_1276;product=Chromosome partition protein mukF;protein_id=EGT81581.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150414 151746 . + . ID=id-GGE_1276;Dbxref=InterPro:IPR005582,PFAM:PF03882,PIR:PIRSF018282;Note=superfamily~condensin complex mukbef%2C mukf subunit~chromosome partition protein mukf~HAMAP:MF_01803~mukf~chromosome partition protein mukf~kicb~chromosome partition protein mukf%3B label: KicB superfamily;gbkey=misc_feature;gene=mukF;locus_tag=GGE_1276 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150438 150747 . + . ID=id-GGE_1276-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=mukF;locus_tag=GGE_1276 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150771 150915 . + . ID=id-GGE_1276-3;Note=superfamily:SSF140570~mukf c-terminal domain-like;gbkey=misc_feature;gene=mukF;locus_tag=GGE_1276 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150450 150840 . - . ID=id-AFQR01000020.1:150450..150840;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 150522 151029 . - . ID=id-AFQR01000020.1:150522..151029;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 151897 152631 . + . ID=gene-GGE_1277;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=GGE_1277 GCA_000222085.2|AFQR01000020.1 Genbank CDS 151897 152631 . + 0 ID=cds-EGT81582.1;Parent=gene-GGE_1277;Dbxref=GeneID:1170655,InterPro:IPR007385,PFAM:PF04288,NCBI_GP:EGT81582.1;Name=EGT81582.1;Ontology_term=GO:0030261,GO:0007059,GO:0005737;gbkey=CDS;gene=mukE;go_component=cytoplasm|0005737||;go_process=chromosome condensation|0030261||,chromosome segregation|0007059||;locus_tag=GGE_1277;product=Chromosome partition protein mukE;protein_id=EGT81582.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 151897 152611 . + . ID=id-GGE_1277;Note=superfamily%3B label: MukE superfamily;gbkey=misc_feature;gene=mukE;locus_tag=GGE_1277 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 151924 152605 . + . ID=id-GGE_1277-2;Dbxref=InterPro:IPR007385,PFAM:PF04288;Note=muke~prokaryotic chromosome segregation/condensation protein muke;gbkey=misc_feature;gene=mukE;locus_tag=GGE_1277 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 151924 152599 . + . ID=id-GGE_1277-3;Dbxref=InterPro:IPR007385;Note=HAMAP:MF_01802~muke~prokaryotic chromosome segregation/condensation protein muke;gbkey=misc_feature;gene=mukE;locus_tag=GGE_1277 GCA_000222085.2|AFQR01000020.1 Genbank gene 152631 157163 . + . ID=gene-GGE_1278;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank CDS 152631 157163 . + 0 ID=cds-EGT81583.1;Parent=gene-GGE_1278;Dbxref=GeneID:167017251,InterPro:IPR007406,InterPro:IPR012090,PFAM:PF04310,PIR:PIRSF005246,NCBI_GP:EGT81583.1;Name=EGT81583.1;Ontology_term=GO:0030261,GO:0007059,GO:0009295,GO:0005524,GO:0003677;gbkey=CDS;gene=mukB;go_component=nucleoid|0009295||;go_function=ATP binding|0005524||,DNA binding|0003677||;go_process=chromosome condensation|0030261||,chromosome segregation|0007059||;locus_tag=GGE_1278;product=Chromosome partition protein mukB;protein_id=EGT81583.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152631 157161 . + . ID=id-GGE_1278;Dbxref=InterPro:IPR012090,PIR:PIRSF005246;Note=chromosome partition protein mukb~chromosome partition protein mukb;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152640 152712 . + . ID=id-GGE_1278-2;Note=seg;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152757 157038 . + . ID=id-GGE_1278-3;Dbxref=InterPro:IPR012090;Note=multi-dom~HAMAP:MF_01800~mukb~chromosome partition protein mukb%3B label: mukB;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152760 153306 . + . ID=id-GGE_1278-4;Dbxref=InterPro:IPR007406,PFAM:PF04310;Note=superfamily~mukb~prokaryotic chromosome segregation/condensation protein mukb%3B label: MukB superfamily;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152766 153294 . + . ID=id-GGE_1278-5;Dbxref=InterPro:IPR007406;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase~Gene3D:3.40.1140.10~prokaryotic chromosome segregation/condensation protein mukb;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152769 156792 . + . ID=id-GGE_1278-6;Note=HMMPanther:PTHR18937:SF146~subfamily not named~HMMPanther:PTHR18937~family not named;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152772 156912 . + . ID=id-GGE_1278-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 153741 153750 . + . ID=id-GGE_1278-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 156293 156302 . + . ID=id-GGE_1278-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mukB;locus_tag=GGE_1278 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152673 153942 . - . ID=id-AFQR01000020.1:152673..153942;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152676 155274 . - . ID=id-AFQR01000020.1:152676..155274;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152679 153687 . - . ID=id-AFQR01000020.1:152679..153687;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152697 156384 . - . ID=id-AFQR01000020.1:152697..156384;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152697 155562 . - . ID=id-AFQR01000020.1:152697..155562;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152697 155418 . - . ID=id-AFQR01000020.1:152697..155418;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152697 154083 . - . ID=id-AFQR01000020.1:152697..154083;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152718 155994 . - . ID=id-AFQR01000020.1:152718..155994;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152718 155331 . - . ID=id-AFQR01000020.1:152718..155331;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152718 155094 . - . ID=id-AFQR01000020.1:152718..155094;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152718 154650 . - . ID=id-AFQR01000020.1:152718..154650;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152739 155685 . - . ID=id-AFQR01000020.1:152739..155685;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152739 154410 . - . ID=id-AFQR01000020.1:152739..154410;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152874 155682 . - . ID=id-AFQR01000020.1:152874..155682;Note=superfamily%3B label: Prox1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 152886 153780 . - . ID=id-AFQR01000020.1:152886..153780;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 153149 153158 . - . ID=id-AFQR01000020.1:153149..153158;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 154523 154532 . - . ID=id-AFQR01000020.1:154523..154532;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 157244 157585 . + . ID=gene-GGE_1279;Name=GGE_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1279 GCA_000222085.2|AFQR01000020.1 Genbank CDS 157244 157585 . + 0 ID=cds-EGT81584.1;Parent=gene-GGE_1279;Dbxref=InterPro:IPR001525,InterPro:IPR018117,PFAM:PF00145,NCBI_GP:EGT81584.1;Name=EGT81584.1;Note=Hypothetical s-adenosyl-L-methionine-dependent methyltransferase;Ontology_term=GO:0006306,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA methylation|0006306||;locus_tag=GGE_1279;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT81584.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157244 157574 . + . ID=id-GGE_1279;Dbxref=InterPro:IPR001525;Note=HMMPanther:PTHR10629:SF11~cytosine-specific methyltransferase~HMMPanther:PTHR10629~cytosine-specific methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_1279 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157244 157565 . + . ID=id-GGE_1279-2;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_1279 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157244 157550 . + . ID=id-GGE_1279-3;Dbxref=InterPro:IPR001525,PFAM:PF00145;Note=dna_methylase~c-5 cytosine methyltransferase~superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase~Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_1279 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157283 157433 . - . ID=id-AFQR01000020.1:157283..157433;Dbxref=InterPro:IPR018117;Note=PatternScan:PS00094~c5_mtase_1~dna methylase%2C c-5 cytosine-specific%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157582 158218 . + . ID=id-AFQR01000020.1:157582..158218;Dbxref=InterPro:IPR001525;Note=HMMPanther:PTHR10629:SF11~cytosine-specific methyltransferase~HMMPanther:PTHR10629~cytosine-specific methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157582 158215 . + . ID=id-AFQR01000020.1:157582..158215;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157582 158209 . + . ID=id-AFQR01000020.1:157582..158209;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157588 158203 . + . ID=id-AFQR01000020.1:157588..158203;Dbxref=InterPro:IPR001525,PFAM:PF00145;Note=dna_methylase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157639 158149 . - . ID=id-AFQR01000020.1:157639..158149;Dbxref=InterPro:IPR018117;Note=PatternScan:PS00095~c5_mtase_2~dna methylase%2C c-5 cytosine-specific%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 157672 158089 . + . ID=id-AFQR01000020.1:157672..158089;Note=Gene3D:3.90.120.10;gbkey=misc_feature GCA_000222085.2|AFQR01000020.1 Genbank gene 158238 158441 . + . ID=gene-GGE_1280;Name=GGE_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1280 GCA_000222085.2|AFQR01000020.1 Genbank CDS 158238 158441 . + 0 ID=cds-EGT81585.1;Parent=gene-GGE_1280;Dbxref=InterPro:IPR019059,PFAM:PF09556,NCBI_GP:EGT81585.1;Name=EGT81585.1;Note=Hypothetical restriction endonuclease%2C type II%2C HaeIII;gbkey=CDS;locus_tag=GGE_1280;product=putative restriction endonuclease%2C type II%2C HaeIII;protein_id=EGT81585.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 158265 158394 . + . ID=id-GGE_1280;Dbxref=InterPro:IPR019059,PFAM:PF09556;Note=re_haeiii~restriction endonuclease%2C type ii%2C haeiii;gbkey=misc_feature;locus_tag=GGE_1280 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 158265 158379 . + . ID=id-GGE_1280-2;Note=superfamily%3B label: RE_HaeIII superfamily;gbkey=misc_feature;locus_tag=GGE_1280 GCA_000222085.2|AFQR01000020.1 Genbank gene 158628 158816 . + . ID=gene-GGE_1281;Name=GGE_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1281 GCA_000222085.2|AFQR01000020.1 Genbank CDS 158628 158816 . + 0 ID=cds-EGT81586.1;Parent=gene-GGE_1281;Dbxref=InterPro:IPR019059,PFAM:PF09556,NCBI_GP:EGT81586.1;Name=EGT81586.1;Note=Hypothetical restriction endonuclease%2C type II%2C HaeIII;gbkey=CDS;locus_tag=GGE_1281;product=putative restriction endonuclease%2C type II%2C HaeIII;protein_id=EGT81586.1;transl_table=11 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 158628 158814 . + . ID=id-GGE_1281;Note=superfamily%3B label: RE_HaeIII superfamily;gbkey=misc_feature;locus_tag=GGE_1281 GCA_000222085.2|AFQR01000020.1 Genbank sequence_feature 158634 158808 . + . ID=id-GGE_1281-2;Dbxref=InterPro:IPR019059,PFAM:PF09556;Note=re_haeiii~restriction endonuclease%2C type ii%2C haeiii;gbkey=misc_feature;locus_tag=GGE_1281 ##sequence-region AFQR01000019.1 1 62706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000019.1 Genbank region 1 62706 . + . ID=AFQR01000019.1:1..62706;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 587 593 . + . ID=id-AFQR01000019.1:587..593;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 733 1302 . + . ID=gene-GGE_1086;Name=GGE_1086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1086 GCA_000222085.2|AFQR01000019.1 Genbank CDS 733 1302 . + 0 ID=cds-EGT81652.1;Parent=gene-GGE_1086;Dbxref=GeneID:319775700,NCBI_GP:EGT81652.1;Name=EGT81652.1;Note=YP_004138188~HICON_10420;gbkey=CDS;locus_tag=GGE_1086;product=Hypothetical protein;protein_id=EGT81652.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 772 862 . - . ID=id-AFQR01000019.1:772..862;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 1299 1535 . + . ID=gene-GGE_1087;Name=GGE_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1087 GCA_000222085.2|AFQR01000019.1 Genbank CDS 1299 1535 . + 0 ID=cds-EGT81653.1;Parent=gene-GGE_1087;Dbxref=GeneID:229844462,NCBI_GP:EGT81653.1;Name=EGT81653.1;Note=ZP_04464602~CGSHi6P18H1_09090;gbkey=CDS;locus_tag=GGE_1087;product=Hypothetical protein;protein_id=EGT81653.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 1368 1428 . + . ID=id-GGE_1087;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1087 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 1329 1506 . - . ID=id-AFQR01000019.1:1329..1506;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 1492 1501 . - . ID=id-AFQR01000019.1:1492..1501;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2129 2264 . - . ID=id-AFQR01000019.1:2129..2264;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2141 2150 . + . ID=id-AFQR01000019.1:2141..2150;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2144 2147 . + . ID=id-AFQR01000019.1:2144..2147;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2147 2255 . - . ID=id-AFQR01000019.1:2147..2255;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2258 2267 . + . ID=id-AFQR01000019.1:2258..2267;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2464 2494 . + . ID=id-AFQR01000019.1:2464..2494;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 2696 3532 . + . ID=gene-GGE_1088;Name=GGE_1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1088 GCA_000222085.2|AFQR01000019.1 Genbank CDS 2696 3532 . + 0 ID=cds-EGT81654.1;Parent=gene-GGE_1088;Dbxref=GeneID:254361488,InterPro:IPR017880,InterPro:IPR018004,PFAM:PF04383,NCBI_GP:EGT81654.1;Name=EGT81654.1;Note=ZP_04977627;gbkey=CDS;locus_tag=GGE_1088;product=putative kilA-like protein;protein_id=EGT81654.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2708 3095 . + . ID=id-GGE_1088;Dbxref=InterPro:IPR017880;Note=ProfileScan:PS51301~kila_n~kila;gbkey=misc_feature;locus_tag=GGE_1088 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2714 3098 . + . ID=id-GGE_1088-2;Note=superfamily%3B label: KilA-N superfamily;gbkey=misc_feature;locus_tag=GGE_1088 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2723 3086 . + . ID=id-GGE_1088-3;Dbxref=InterPro:IPR018004,PFAM:PF04383;Note=kila-n~kila/apses-type hth%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1088 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 2762 3104 . - . ID=id-AFQR01000019.1:2762..3104;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 3845 4657 . + . ID=gene-GGE_1089;Name=GGE_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1089 GCA_000222085.2|AFQR01000019.1 Genbank CDS 3845 4657 . + 0 ID=cds-EGT81655.1;Parent=gene-GGE_1089;Dbxref=InterPro:IPR013557,PFAM:PF08346,NCBI_GP:EGT81655.1;Name=EGT81655.1;Note=Hypothetical antA/AntB antirepressor;gbkey=CDS;locus_tag=GGE_1089;product=putative antA/AntB antirepressor;protein_id=EGT81655.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 3875 4154 . + . ID=id-GGE_1089;Note=superfamily%3B label: AntA superfamily;gbkey=misc_feature;locus_tag=GGE_1089 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 3911 4043 . + . ID=id-GGE_1089-2;Dbxref=InterPro:IPR013557,PFAM:PF08346;Note=anta~anta/antb antirepressor;gbkey=misc_feature;locus_tag=GGE_1089 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 4680 4689 . - . ID=id-AFQR01000019.1:4680..4689;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 5116 6141 . + . ID=gene-GGE_1090;Name=GGE_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank CDS 5116 6141 . + 0 ID=cds-EGT81656.1;Parent=gene-GGE_1090;Dbxref=GeneID:319775691,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT81656.1;Name=EGT81656.1;Note=YP_004138179;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_1090;product=Prophage integrase-like protein;protein_id=EGT81656.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5332 5485 . + . ID=id-GGE_1090;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5332 5341 . + . ID=id-GGE_1090-2;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5587 5785 . + . ID=id-GGE_1090-3;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5587 5641 . + . ID=id-GGE_1090-4;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5767 . + . ID=id-GGE_1090-5;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5752 . + . ID=id-GGE_1090-6;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5749 . + . ID=id-GGE_1090-7;Note=multi-dom%3B label: Phage_integrase;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5746 . + . ID=id-GGE_1090-8;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5623 . + . ID=id-GGE_1090-9;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5608 . + . ID=id-GGE_1090-10;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5605 . + . ID=id-GGE_1090-11;Note=multi-dom%3B label: Phage_integrase;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 5599 5602 . + . ID=id-GGE_1090-12;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_1090 GCA_000222085.2|AFQR01000019.1 Genbank gene 6574 7035 . - . ID=gene-GGE_1091;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank CDS 6574 7035 . - 0 ID=cds-EGT81657.1;Parent=gene-GGE_1091;Dbxref=GeneID:129596,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,InterPro:IPR014169,PFAM:PF00691,TIGRFAM:TIGR02802,NCBI_GP:EGT81657.1;Name=EGT81657.1;Ontology_term=GO:0009279,GO:0016021;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||,integral to membrane|0016021||;locus_tag=GGE_1091;product=Outer membrane protein P6;protein_id=EGT81657.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6574 6634 . - . ID=id-GGE_1091;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6589 6658 . - . ID=id-GGE_1091-2;Note=seg;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6694 6916 . - . ID=id-GGE_1091-3;Dbxref=InterPro:IPR006665;Note=ProfileScan:PS51123~ompa_2~outer membrane protein%2C ompa/motb;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6712 6898 . - . ID=id-GGE_1091-4;Dbxref=InterPro:IPR006665;Note=superfamily:SSF103088~ompa-like~outer membrane protein%2C ompa/motb;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6721 6883 . - . ID=id-GGE_1091-5;Dbxref=InterPro:IPR006665;Note=Gene3D:3.30.1330.60~outer membrane protein%2C ompa/motb;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6724 6886 . - . ID=id-GGE_1091-6;Dbxref=InterPro:IPR014169,TIGRFAM:TIGR02802;Note=pal_lipo: peptidoglycan-associated lipoprote~peptidoglycan-associated lipoprotein;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6724 6880 . - . ID=id-GGE_1091-7;Note=specific~superfamily%3B label: OmpA_C-like;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6730 6862 . - . ID=id-GGE_1091-8;Dbxref=InterPro:IPR006665,PFAM:PF00691;Note=ompa~outer membrane protein%2C ompa/motb;gbkey=misc_feature;gene=pal;locus_tag=GGE_1091 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6622 6823 . + . ID=id-AFQR01000019.1:6622..6823;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6625 6868 . + . ID=id-AFQR01000019.1:6625..6868;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6643 6733 . + . ID=id-AFQR01000019.1:6643..6733;Dbxref=InterPro:IPR006664;Note=FPrintScan:PR01021~ompadomain~outer membrane protein%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 6709 6829 . + . ID=id-AFQR01000019.1:6709..6829;Dbxref=InterPro:IPR006690;Note=PatternScan:PS01068~ompa_1~outer membrane protein%2C ompa-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 7061 8368 . - . ID=gene-GGE_1092;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank CDS 7061 8368 . - 0 ID=cds-EGT81658.1;Parent=gene-GGE_1092;Dbxref=GeneID:81336603,InterPro:IPR007195,InterPro:IPR011659,InterPro:IPR014167,InterPro:IPR015943,PFAM:PF04052,PFAM:PF07676,TIGRFAM:TIGR02800,NCBI_GP:EGT81658.1;Name=EGT81658.1;Ontology_term=GO:0017038,GO:0015031,GO:0042597,GO:0005515;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||;go_function=protein binding|0005515||;go_process=protein import|0017038||,protein transport|0015031||;locus_tag=GGE_1092;product=Protein tolB;protein_id=EGT81658.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7088 8342 . - . ID=id-GGE_1092;Note=multi-dom%3B label: tolB;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7109 8303 . - . ID=id-GGE_1092-2;Dbxref=InterPro:IPR014167;Note=HAMAP:MF_00671~tolb~tol-pal system beta propeller repeat-containing protein%2C tolb;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7121 7394 . - . ID=id-GGE_1092-3;Dbxref=InterPro:IPR007195,PFAM:PF04052;Note=tolb_n~tolb;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7130 8285 . - . ID=id-GGE_1092-4;Dbxref=InterPro:IPR014167,TIGRFAM:TIGR02800;Note=propeller_tolb: tol-pal system beta pr~tol-pal system beta propeller repeat-containing protein%2C tolb;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7163 7439 . - . ID=id-GGE_1092-5;Dbxref=InterPro:IPR007195;Note=Gene3D:3.40.50.10070~tolb;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7163 7349 . - . ID=id-GGE_1092-6;Note=superfamily%3B label: TolB_N superfamily;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7181 7457 . - . ID=id-GGE_1092-7;Dbxref=InterPro:IPR007195;Note=superfamily:SSF52964~tolb domain~tolb;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7541 7850 . - . ID=id-GGE_1092-8;Dbxref=InterPro:IPR015943;Note=Gene3D:2.130.10.10~wd40/yvtn repeat-like-containing domain;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7550 7868 . - . ID=id-GGE_1092-9;Note=superfamily:SSF69304~tricorn protease n-terminal domain;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7673 7739 . - . ID=id-GGE_1092-10;Note=HMMPanther:PTHR11731:SF4~dipeptidyl-peptidase~HMMPanther:PTHR11731~family not named;gbkey=misc_feature;gene=tolB;locus_tag=GGE_1092 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7100 7106 . + . ID=id-AFQR01000019.1:7100..7106;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7142 7682 . + . ID=id-AFQR01000019.1:7142..7682;Dbxref=InterPro:IPR011659,PFAM:PF07676;Note=pd40~wd40-like beta propeller;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7148 8180 . + . ID=id-AFQR01000019.1:7148..8180;Dbxref=InterPro:IPR011659,PFAM:PF07676;Note=pd40~wd40-like beta propeller;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7157 7814 . + . ID=id-AFQR01000019.1:7157..7814;Dbxref=InterPro:IPR011659,PFAM:PF07676;Note=pd40~wd40-like beta propeller;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7169 7934 . + . ID=id-AFQR01000019.1:7169..7934;Dbxref=InterPro:IPR011659,PFAM:PF07676;Note=pd40~wd40-like beta propeller;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 7568 7616 . + . ID=id-AFQR01000019.1:7568..7616;Note=superfamily%3B label: WD40 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 8386 9519 . - . ID=gene-GGE_1093;Name=GGE_1093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank CDS 8386 9519 . - 0 ID=cds-EGT81659.1;Parent=gene-GGE_1093;Dbxref=GeneID:1685079,InterPro:IPR014161,PFAM:PF06519,TIGRFAM:TIGR02794,NCBI_GP:EGT81659.1;Name=EGT81659.1;Note=AAC44596;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1093;product=TolA;protein_id=EGT81659.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8392 8659 . - . ID=id-GGE_1093;Note=multi-dom%3B label: tolA;gbkey=misc_feature;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8416 9487 . - . ID=id-GGE_1093-2;Dbxref=InterPro:IPR014161,TIGRFAM:TIGR02794;Note=tola_full: protein tola~tol-pal system%2C tola;gbkey=misc_feature;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8422 8455 . - . ID=id-GGE_1093-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8665 8854 . - . ID=id-GGE_1093-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8674 8719 . - . ID=id-GGE_1093-5;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1093 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8422 9154 . + . ID=id-AFQR01000019.1:8422..9154;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8434 9217 . + . ID=id-AFQR01000019.1:8434..9217;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8437 8494 . + . ID=id-AFQR01000019.1:8437..8494;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8518 9013 . + . ID=id-AFQR01000019.1:8518..9013;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8602 9280 . + . ID=id-AFQR01000019.1:8602..9280;Note=Gene3D:3.30.1150.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8632 9265 . + . ID=id-AFQR01000019.1:8632..9265;Note=superfamily%3B label: TolA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8659 9247 . + . ID=id-AFQR01000019.1:8659..9247;Note=superfamily:SSF74653~tola/tonb c-terminal domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 8671 9226 . + . ID=id-AFQR01000019.1:8671..9226;Dbxref=InterPro:IPR014161,PFAM:PF06519;Note=tola~tol-pal system%2C tola;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 9534 9953 . - . ID=gene-GGE_1094;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=GGE_1094 GCA_000222085.2|AFQR01000019.1 Genbank CDS 9534 9953 . - 0 ID=cds-EGT81660.1;Parent=gene-GGE_1094;Dbxref=GeneID:1174731,InterPro:IPR003400,PFAM:PF02472,NCBI_GP:EGT81660.1;Name=EGT81660.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=tolR;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_1094;product=Protein tolR;protein_id=EGT81660.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 9543 9945 . - . ID=id-GGE_1094;Note=superfamily%3B label: ExbD superfamily;gbkey=misc_feature;gene=tolR;locus_tag=GGE_1094 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 9555 9927 . - . ID=id-GGE_1094-2;Dbxref=InterPro:IPR003400,PFAM:PF02472;Note=exbd~biopolymer transport protein exbd/tolr;gbkey=misc_feature;gene=tolR;locus_tag=GGE_1094 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 9573 9603 . - . ID=id-GGE_1094-3;Note=transmembrane_regions;gbkey=misc_feature;gene=tolR;locus_tag=GGE_1094 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 9561 9591 . + . ID=id-AFQR01000019.1:9561..9591;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 10018 10704 . - . ID=gene-GGE_1095;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank CDS 10018 10704 . - 0 ID=cds-EGT81661.1;Parent=gene-GGE_1095;Dbxref=GeneID:1174730,InterPro:IPR002898,InterPro:IPR014163,PFAM:PF01618,TIGRFAM:TIGR02796,NCBI_GP:EGT81661.1;Name=EGT81661.1;Ontology_term=GO:0015031,GO:0006810,GO:0016021,GO:0016020,GO:0008565;gbkey=CDS;gene=tolQ;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=protein transporter activity|0008565||;go_process=protein transport|0015031||,transport|0006810||;locus_tag=GGE_1095;product=Protein tolQ;protein_id=EGT81661.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10033 10675 . - . ID=id-GGE_1095;Note=superfamily%3B label: MotA_ExbB superfamily;gbkey=misc_feature;gene=tolQ;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10036 10663 . - . ID=id-GGE_1095-2;Dbxref=InterPro:IPR014163,TIGRFAM:TIGR02796;Note=tolq: protein tolq~tol-pal system%2C tolq;gbkey=misc_feature;gene=tolQ;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10063 10096 . - . ID=id-GGE_1095-3;Note=seg;gbkey=misc_feature;gene=tolQ;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10063 10087 . - . ID=id-GGE_1095-4;Note=transmembrane_regions;gbkey=misc_feature;gene=tolQ;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10249 10423 . - . ID=id-GGE_1095-5;Dbxref=InterPro:IPR002898,PFAM:PF01618;Note=mota_exbb~mota/tolq/exbb proton channel;gbkey=misc_feature;gene=tolQ;locus_tag=GGE_1095 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10087 10531 . + . ID=id-AFQR01000019.1:10087..10531;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10087 10420 . + . ID=id-AFQR01000019.1:10087..10420;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 10723 11094 . - . ID=gene-GGE_1096;Name=GGE_1096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank CDS 10723 11094 . - 0 ID=cds-EGT81662.1;Parent=gene-GGE_1096;Dbxref=InterPro:IPR006683,InterPro:IPR006684,PFAM:PF03061,TIGRFAM:TIGR00051,NCBI_GP:EGT81662.1;Name=EGT81662.1;Note=Hypothetical thioesterase superfamily;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||;locus_tag=GGE_1096;product=putative thioesterase superfamily;protein_id=EGT81662.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10735 10771 . - . ID=id-GGE_1096;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10768 10951 . - . ID=id-GGE_1096-2;Dbxref=InterPro:IPR006683,PFAM:PF03061;Note=4hbt~thioesterase superfamily;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10771 11014 . - . ID=id-GGE_1096-3;Dbxref=InterPro:IPR006684,TIGRFAM:TIGR00051;Note=tigr00051: acyl-coa thioester hydrolase%2C yb~4-hydroxybenzoyl-coa thioesterase;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10774 11035 . - . ID=id-GGE_1096-4;Note=Gene3D:3.10.129.10;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10777 11041 . - . ID=id-GGE_1096-5;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10777 10975 . - . ID=id-GGE_1096-6;Note=specific~superfamily%3B label: 4HBT;gbkey=misc_feature;locus_tag=GGE_1096 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 10756 10822 . + . ID=id-AFQR01000019.1:10756..10822;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 11214 11507 . - . ID=gene-GGE_1097;Name=GGE_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1097 GCA_000222085.2|AFQR01000019.1 Genbank CDS 11214 11507 . - 0 ID=cds-EGT81663.1;Parent=gene-GGE_1097;Dbxref=GeneID:325579038,InterPro:IPR011846,PFAM:PF09600,TIGRFAM:TIGR02112,NCBI_GP:EGT81663.1;Name=EGT81663.1;Note=ZP_08148994;gbkey=CDS;locus_tag=GGE_1097;product=putative cyd operon protein YbgE;protein_id=EGT81663.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11220 11496 . - . ID=id-GGE_1097;Dbxref=InterPro:IPR011846,TIGRFAM:TIGR02112;Note=cyd_oper_ybge: cyd operon protein ybge~cyd operon protein ybge;gbkey=misc_feature;locus_tag=GGE_1097 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11220 11466 . - . ID=id-GGE_1097-2;Note=superfamily%3B label: Cyd_oper_YbgE superfamily;gbkey=misc_feature;locus_tag=GGE_1097 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11250 11274 . - . ID=id-GGE_1097-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1097 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11256 11445 . - . ID=id-GGE_1097-4;Dbxref=InterPro:IPR011846,PFAM:PF09600;Note=cyd_oper_ybge~cyd operon protein ybge;gbkey=misc_feature;locus_tag=GGE_1097 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11274 11352 . + . ID=id-AFQR01000019.1:11274..11352;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11283 11430 . + . ID=id-AFQR01000019.1:11283..11430;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11548 11578 . - . ID=id-AFQR01000019.1:11548..11578;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 11618 12754 . - . ID=gene-GGE_1098;Name=GGE_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1098 GCA_000222085.2|AFQR01000019.1 Genbank CDS 11618 12754 . - 0 ID=cds-EGT81664.1;Parent=gene-GGE_1098;Dbxref=GeneID:1169174,InterPro:IPR003317,PFAM:PF02322,TIGRFAM:TIGR00203,NCBI_GP:EGT81664.1;Name=EGT81664.1;Note=HI_1075;Ontology_term=GO:0055114,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1098;product=Putative cytochrome oxidase subunit 2;protein_id=EGT81664.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11618 12752 . - . ID=id-GGE_1098;Dbxref=InterPro:IPR003317,TIGRFAM:TIGR00203;Note=superfamily~cydb: cytochrome d ubiquinol oxidase%2C subuni~cytochrome d ubiquinol oxidase%2C subunit ii%3B label: PRK15028 superfamily;gbkey=misc_feature;locus_tag=GGE_1098 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11636 12689 . - . ID=id-GGE_1098-2;Note=multi-dom%3B label: Cyto_ox_2;gbkey=misc_feature;locus_tag=GGE_1098 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11639 12683 . - . ID=id-GGE_1098-3;Dbxref=InterPro:IPR003317,PFAM:PF02322;Note=cyto_ox_2~cytochrome d ubiquinol oxidase%2C subunit ii;gbkey=misc_feature;locus_tag=GGE_1098 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11639 11672 . - . ID=id-GGE_1098-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1098 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11639 11657 . + . ID=id-AFQR01000019.1:11639..11657;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11645 12425 . + . ID=id-AFQR01000019.1:11645..12425;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11651 11885 . + . ID=id-AFQR01000019.1:11651..11885;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11678 12404 . + . ID=id-AFQR01000019.1:11678..12404;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 12620 . + . ID=id-AFQR01000019.1:11687..12620;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 12482 . + . ID=id-AFQR01000019.1:11687..12482;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 12224 . + . ID=id-AFQR01000019.1:11687..12224;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 12095 . + . ID=id-AFQR01000019.1:11687..12095;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 11984 . + . ID=id-AFQR01000019.1:11687..11984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 11687 11849 . + . ID=id-AFQR01000019.1:11687..11849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12648 12657 . + . ID=id-AFQR01000019.1:12648..12657;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 12769 14334 . - . ID=gene-GGE_1099;Name=GGE_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1099 GCA_000222085.2|AFQR01000019.1 Genbank CDS 12769 14334 . - 0 ID=cds-EGT81665.1;Parent=gene-GGE_1099;Dbxref=InterPro:IPR002585,PFAM:PF01654,NCBI_GP:EGT81665.1;Name=EGT81665.1;Note=HI_1076;Ontology_term=GO:0055114,GO:0016020,GO:0016491;gbkey=CDS;go_component=membrane|0016020||;go_function=oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_1099;product=Putative cytochrome oxidase subunit 1;protein_id=EGT81665.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12769 14329 . - . ID=id-GGE_1099;Note=superfamily%3B label: Bac_Ubq_Cox superfamily;gbkey=misc_feature;locus_tag=GGE_1099 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12790 14272 . - . ID=id-GGE_1099-2;Dbxref=InterPro:IPR002585,PFAM:PF01654;Note=bac_ubq_cox~cytochrome d ubiquinol oxidase%2C subunit i;gbkey=misc_feature;locus_tag=GGE_1099 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12829 12838 . - . ID=id-GGE_1099-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1099 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12799 13966 . + . ID=id-AFQR01000019.1:12799..13966;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12811 13051 . + . ID=id-AFQR01000019.1:12811..13051;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12829 13426 . + . ID=id-AFQR01000019.1:12829..13426;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 14200 . + . ID=id-AFQR01000019.1:12838..14200;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 14050 . + . ID=id-AFQR01000019.1:12838..14050;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 13945 . + . ID=id-AFQR01000019.1:12838..13945;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 13324 . + . ID=id-AFQR01000019.1:12838..13324;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 13162 . + . ID=id-AFQR01000019.1:12838..13162;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 13057 . + . ID=id-AFQR01000019.1:12838..13057;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 12838 12931 . + . ID=id-AFQR01000019.1:12838..12931;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 14787 15071 . + . ID=gene-GGE_1100;Name=GGE_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1100 GCA_000222085.2|AFQR01000019.1 Genbank CDS 14787 15071 . + 0 ID=cds-EGT81666.1;Parent=gene-GGE_1100;Dbxref=GeneID:145632562,InterPro:IPR020493,NCBI_GP:EGT81666.1;Name=EGT81666.1;Note=ZP_01788296;gbkey=CDS;locus_tag=GGE_1100;product=site-specific tyrosine recombinase XerD;protein_id=EGT81666.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 14787 15069 . + . ID=id-GGE_1100;Dbxref=InterPro:IPR020493;Note=BlastProDom:PD065628~y310_haein_p43982~uncharacterised protein family hi0310;gbkey=misc_feature;locus_tag=GGE_1100 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 14810 14819 . - . ID=id-AFQR01000019.1:14810..14819;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 14835 14949 . - . ID=id-AFQR01000019.1:14835..14949;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 15123 16130 . - . ID=gene-GGE_1101;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank CDS 15123 16130 . - 0 ID=cds-EGT81667.1;Parent=gene-GGE_1101;Dbxref=GeneID:166231497,InterPro:IPR004605,InterPro:IPR008823,InterPro:IPR008824,InterPro:IPR011991,PFAM:PF05491,PFAM:PF05496,TIGRFAM:TIGR00635,NCBI_GP:EGT81667.1;Name=EGT81667.1;Ontology_term=GO:0006310,GO:0006281,GO:0005524,GO:0003677,GO:0009378;gbkey=CDS;gene=ruvB;go_function=ATP binding|0005524||,DNA binding|0003677||,four-way junction helicase activity|0009378||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_1101;product=Holliday junction ATP-dependent DNA helicase ruvB;protein_id=EGT81667.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15123 16128 . - . ID=id-GGE_1101;Dbxref=InterPro:IPR004605;Note=HAMAP:MF_00016~dna_helic_ruvb~dna helicase%2C holliday junction ruvb type;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15123 16113 . - . ID=id-GGE_1101-2;Note=HMMPanther:PTHR13779:SF2~holliday junction dna helicase ruvb~HMMPanther:PTHR13779~family not named;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15141 16104 . - . ID=id-GGE_1101-3;Note=multi-dom%3B label: ruvB;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15144 15819 . - . ID=id-GGE_1101-4;Dbxref=InterPro:IPR008824,PFAM:PF05496;Note=ruvb_n~dna helicase%2C holliday junction ruvb type;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15186 15837 . - . ID=id-GGE_1101-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15192 15594 . - . ID=id-GGE_1101-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15201 16038 . - . ID=id-GGE_1101-7;Dbxref=InterPro:IPR004605,TIGRFAM:TIGR00635;Note=ruvb: holliday junction dna helicase ruvb~dna helicase%2C holliday junction ruvb type;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15237 15546 . - . ID=id-GGE_1101-8;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;gene=ruvB;locus_tag=GGE_1101 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15339 15903 . + . ID=id-AFQR01000019.1:15339..15903;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15342 15681 . + . ID=id-AFQR01000019.1:15342..15681;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15348 15894 . + . ID=id-AFQR01000019.1:15348..15894;Note=superfamily%3B label: RuvB_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15348 15891 . + . ID=id-AFQR01000019.1:15348..15891;Dbxref=InterPro:IPR008823,PFAM:PF05491;Note=ruvb_c~dna helicase%2C holliday junction ruvb type;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15351 15900 . + . ID=id-AFQR01000019.1:15351..15900;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 15357 15882 . + . ID=id-AFQR01000019.1:15357..15882;Dbxref=InterPro:IPR008823;Note=BlastProDom:PD005323~ruvb_haein_p44631~dna helicase%2C holliday junction ruvb type;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 16138 16752 . - . ID=gene-GGE_1102;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank CDS 16138 16752 . - 0 ID=cds-EGT81668.1;Parent=gene-GGE_1102;Dbxref=GeneID:166230557,InterPro:IPR000085,InterPro:IPR010994,InterPro:IPR011114,InterPro:IPR012340,InterPro:IPR013849,InterPro:IPR016027,PFAM:PF01330,PFAM:PF07499,TIGRFAM:TIGR00084,NCBI_GP:EGT81668.1;Name=EGT81668.1;Ontology_term=GO:0006310,GO:0006281,GO:0009379,GO:0005524,GO:0003678,GO:0009378;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||;go_function=ATP binding|0005524||,DNA helicase activity|0003678||,four-way junction helicase activity|0009378||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_1102;product=Holliday junction ATP-dependent DNA helicase ruvA;protein_id=EGT81668.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16138 16750 . - . ID=id-GGE_1102;Dbxref=InterPro:IPR000085,TIGRFAM:TIGR00084;Note=multi-dom~HAMAP:MF_00031~dna_helic_ruva~bacterial dna recombination protein ruva~ruva: holliday junction dna helicase ruva~bacterial dna recombination protein ruva%3B label: ruvA;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16138 16336 . - . ID=id-GGE_1102-2;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16138 16327 . - . ID=id-GGE_1102-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16138 16324 . - . ID=id-GGE_1102-4;Dbxref=InterPro:IPR013849,PFAM:PF01330;Note=superfamily~ruva_n~dna helicase%2C holliday junction ruva type%2C domain i%2C bacterial%3B label: RuvA_N superfamily;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16333 16372 . - . ID=id-GGE_1102-5;Dbxref=InterPro:IPR010994;Note=superfamily:SSF47781~ruva domain 2-like~ruva domain 2-like;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16342 16351 . - . ID=id-GGE_1102-6;Note=Gene3D:1.10.150.20;gbkey=misc_feature;gene=ruvA;locus_tag=GGE_1102 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16213 16567 . + . ID=id-AFQR01000019.1:16213..16567;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16243 16642 . + . ID=id-AFQR01000019.1:16243..16642;Note=superfamily%3B label: RuvA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16264 16621 . + . ID=id-AFQR01000019.1:16264..16621;Dbxref=InterPro:IPR011114,PFAM:PF07499;Note=ruva_c~dna helicase%2C holliday junction ruva type%2C domain iii;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16267 16615 . + . ID=id-AFQR01000019.1:16267..16615;Note=Gene3D:1.10.8.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16282 16609 . + . ID=id-AFQR01000019.1:16282..16609;Dbxref=InterPro:IPR011114;Note=superfamily:SSF46929~dna helicase ruva subunit domain~dna helicase%2C holliday junction ruva type%2C domain iii;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16540 16549 . + . ID=id-AFQR01000019.1:16540..16549;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 16815 17387 . - . ID=gene-GGE_1103;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank CDS 16815 17387 . - 0 ID=cds-EGT81669.1;Parent=gene-GGE_1103;Dbxref=GeneID:166233196,InterPro:IPR002176,InterPro:IPR012337,InterPro:IPR020563,PFAM:PF02075,TIGRFAM:TIGR00228,NCBI_GP:EGT81669.1;Name=EGT81669.1;Ontology_term=GO:0006310,GO:0006281,GO:0008821,GO:0004520,GO:0003676;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||,endodeoxyribonuclease activity|0004520||,nucleic acid binding|0003676||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_1103;product=Crossover junction endodeoxyribonuclease ruvC;protein_id=EGT81669.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16815 17385 . - . ID=id-GGE_1103;Dbxref=InterPro:IPR002176;Note=HAMAP:MF_00034~ruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16821 17289 . - . ID=id-GGE_1103-2;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16824 17274 . - . ID=id-GGE_1103-3;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16824 17217 . - . ID=id-GGE_1103-4;Note=specific~superfamily%3B label: RuvC_resolvase;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16827 17283 . - . ID=id-GGE_1103-5;Dbxref=InterPro:IPR002176,TIGRFAM:TIGR00228;Note=ruvc: crossover junction endodeoxyribonuclea~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16827 17256 . - . ID=id-GGE_1103-6;Dbxref=InterPro:IPR002176,PFAM:PF02075;Note=ruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16830 16857 . - . ID=id-GGE_1103-7;Dbxref=InterPro:IPR002176;Note=FPrintScan:PR00696~rsolvaseruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature;gene=ruvC;locus_tag=GGE_1103 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16854 17229 . + . ID=id-AFQR01000019.1:16854..17229;Dbxref=InterPro:IPR002176;Note=FPrintScan:PR00696~rsolvaseruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16858 16867 . + . ID=id-AFQR01000019.1:16858..16867;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16860 17229 . + . ID=id-AFQR01000019.1:16860..17229;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16866 17064 . + . ID=id-AFQR01000019.1:16866..17064;Dbxref=InterPro:IPR002176;Note=FPrintScan:PR00696~rsolvaseruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16866 16998 . + . ID=id-AFQR01000019.1:16866..16998;Dbxref=InterPro:IPR002176;Note=FPrintScan:PR00696~rsolvaseruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16875 17136 . + . ID=id-AFQR01000019.1:16875..17136;Dbxref=InterPro:IPR002176;Note=FPrintScan:PR00696~rsolvaseruvc~crossover junction endodeoxyribonuclease ruvc;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 16920 17154 . + . ID=id-AFQR01000019.1:16920..17154;Dbxref=InterPro:IPR020563;Note=PatternScan:PS01321~ruvc~crossover junction endodeoxyribonuclease ruvc%2C magnesium-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 17434 18174 . - . ID=gene-GGE_1104;Name=GGE_1104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank CDS 17434 18174 . - 0 ID=cds-EGT81670.1;Parent=gene-GGE_1104;Dbxref=GeneID:166227256,InterPro:IPR002876,InterPro:IPR017856,PFAM:PF01709,TIGRFAM:TIGR01033,NCBI_GP:EGT81670.1;Name=EGT81670.1;Note=CGSHiGG_04390;gbkey=CDS;locus_tag=GGE_1104;product=UPF0082 protein;protein_id=EGT81670.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17434 18172 . - . ID=id-GGE_1104;Note=superfamily%3B label: DUF28 superfamily;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17434 18154 . - . ID=id-GGE_1104-2;Dbxref=InterPro:IPR002876;Note=HMMPanther:PTHR12532~family not named~protein of unknown function duf28;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17434 18145 . - . ID=id-GGE_1104-3;Dbxref=InterPro:IPR002876,TIGRFAM:TIGR01033;Note=tigr01033: dna-binding regulatory protein%2C~protein of unknown function duf28;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17434 17671 . - . ID=id-GGE_1104-4;Dbxref=InterPro:IPR017856;Note=Gene3D:1.10.10.200~integrase zinc-binding domain-like;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17443 18166 . - . ID=id-GGE_1104-5;Dbxref=InterPro:IPR002876;Note=superfamily:SSF75625~yebc-like~protein of unknown function duf28;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17443 18142 . - . ID=id-GGE_1104-6;Dbxref=InterPro:IPR002876;Note=HAMAP:MF_00693~upf0082~protein of unknown function duf28;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17449 18130 . - . ID=id-GGE_1104-7;Dbxref=InterPro:IPR002876,PFAM:PF01709;Note=duf28~protein of unknown function duf28;gbkey=misc_feature;locus_tag=GGE_1104 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17545 18064 . + . ID=id-AFQR01000019.1:17545..18064;Note=Gene3D:3.30.1270.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 17644 17839 . + . ID=id-AFQR01000019.1:17644..17839;Note=Gene3D:3.30.70.980;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 18187 18660 . - . ID=gene-GGE_1105;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank CDS 18187 18660 . - 0 ID=cds-EGT81671.1;Parent=gene-GGE_1105;Dbxref=InterPro:IPR000086,InterPro:IPR003564,InterPro:IPR015797,InterPro:IPR020084,PFAM:PF00293,NCBI_GP:EGT81671.1;Name=EGT81671.1;Ontology_term=GO:0006281,GO:0008828,GO:0016787;gbkey=CDS;gene=nudB;go_function=dATP pyrophosphohydrolase activity|0008828||,hydrolase activity|0016787||;go_process=DNA repair|0006281||;locus_tag=GGE_1105;product=Dihydroneopterin triphosphate pyrophosphatase;protein_id=EGT81671.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18217 18577 . - . ID=id-GGE_1105;Note=HMMPanther:PTHR22769~family not named;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18226 18241 . - . ID=id-GGE_1105-2;Dbxref=InterPro:IPR003564;Note=FPrintScan:PR01404~nppphydrlase~datp pyrophosphohydrolase;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18229 18607 . - . ID=id-GGE_1105-3;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18232 18607 . - . ID=id-GGE_1105-4;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18232 18601 . - . ID=id-GGE_1105-5;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18238 18589 . - . ID=id-GGE_1105-6;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18241 18586 . - . ID=id-GGE_1105-7;Note=specific~superfamily%3B label: Nudix_Hydrolase superfamily;gbkey=misc_feature;gene=nudB;locus_tag=GGE_1105 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18229 18595 . + . ID=id-AFQR01000019.1:18229..18595;Dbxref=InterPro:IPR003564;Note=FPrintScan:PR01404~nppphydrlase~datp pyrophosphohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18247 18430 . + . ID=id-AFQR01000019.1:18247..18430;Dbxref=InterPro:IPR003564;Note=FPrintScan:PR01404~nppphydrlase~datp pyrophosphohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18253 18514 . + . ID=id-AFQR01000019.1:18253..18514;Dbxref=InterPro:IPR003564;Note=FPrintScan:PR01404~nppphydrlase~datp pyrophosphohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18253 18331 . + . ID=id-AFQR01000019.1:18253..18331;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18253 18277 . + . ID=id-AFQR01000019.1:18253..18277;Dbxref=InterPro:IPR003564;Note=FPrintScan:PR01404~nppphydrlase~datp pyrophosphohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18422 18431 . + . ID=id-AFQR01000019.1:18422..18431;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 18682 20448 . - . ID=gene-GGE_1106;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank CDS 18682 20448 . - 0 ID=cds-EGT81672.1;Parent=gene-GGE_1106;Dbxref=GeneID:1174503,InterPro:IPR002312,InterPro:IPR004115,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004524,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018150,PFAM:PF00152,PFAM:PF01336,PFAM:PF02938,TIGRFAM:TIGR00459,NCBI_GP:EGT81672.1;Name=EGT81672.1;Ontology_term=GO:0006422,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004815,GO:0016874,GO:0003676,GO:0000166;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,aspartate-tRNA ligase activity|0004815||,ligase activity|0016874||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=aspartyl-tRNA aminoacylation|0006422||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_1106;product=Aspartyl-tRNA synthetase;protein_id=EGT81672.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18682 20446 . - . ID=id-GGE_1106;Dbxref=InterPro:IPR004524,TIGRFAM:TIGR00459;Note=multi-dom~asps_bact: aspartyl-trna synthetase~aspartyl-trna synthetase%2C class iib%2C bacterial/mitochondrial-type%3B label: aspS;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18682 20437 . - . ID=id-GGE_1106-2;Dbxref=InterPro:IPR004524,InterPro:IPR018150;Note=HMMPanther:PTHR22594:SF5~aspartyl-trna synthetase~aspartyl-trna synthetase%2C class iib%2C bacterial/mitochondrial-type~HMMPanther:PTHR22594~family not named~aminoacyl-trna synthetase%2C class ii (d/k/n)-like;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18682 19003 . - . ID=id-GGE_1106-3;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18688 19000 . - . ID=id-GGE_1106-4;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18691 19081 . - . ID=id-GGE_1106-5;Note=specific~superfamily%3B label: EcAspRS_like_N;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18739 18931 . - . ID=id-GGE_1106-6;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19006 20119 . - . ID=id-GGE_1106-7;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19039 20005 . - . ID=id-GGE_1106-8;Dbxref=InterPro:IPR004364,PFAM:PF00152;Note=trna-synt_2~aminoacyl-trna synthetase%2C class ii (d/k/n);gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19099 19936 . - . ID=id-GGE_1106-9;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19099 19111 . - . ID=id-GGE_1106-10;Note=specific~superfamily%3B label: AspRS_core;gbkey=misc_feature;gene=aspS;locus_tag=GGE_1106 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18721 19255 . + . ID=id-AFQR01000019.1:18721..19255;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18724 19306 . + . ID=id-AFQR01000019.1:18724..19306;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18727 20239 . + . ID=id-AFQR01000019.1:18727..20239;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18733 20107 . + . ID=id-AFQR01000019.1:18733..20107;Dbxref=InterPro:IPR002312;Note=FPrintScan:PR01042~trnasynthasp~aspartyl/asparaginyl-trna synthetase%2C class iib;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 18982 19606 . + . ID=id-AFQR01000019.1:18982..19606;Dbxref=InterPro:IPR004115,PFAM:PF02938;Note=superfamily~gad~gad domain%3B label: GAD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19081 19549 . + . ID=id-AFQR01000019.1:19081..19549;Note=superfamily:SSF55261~gad domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19084 19960 . + . ID=id-AFQR01000019.1:19084..19960;Note=superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19108 19516 . + . ID=id-AFQR01000019.1:19108..19516;Dbxref=InterPro:IPR004115;Note=Gene3D:3.30.1360.30~gad domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 19117 19942 . + . ID=id-AFQR01000019.1:19117..19942;Note=Gene3D:3.30.930.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 20667 21185 . + . ID=gene-GGE_1107;Name=GGE_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1107 GCA_000222085.2|AFQR01000019.1 Genbank CDS 20667 21185 . + 0 ID=cds-EGT81673.1;Parent=gene-GGE_1107;Dbxref=GeneID:1175219,InterPro:IPR007269,PFAM:PF04140,NCBI_GP:EGT81673.1;Name=EGT81673.1;Note=HI_0318;Ontology_term=GO:0006481,GO:0016021,GO:0004671;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||;go_process=C-terminal protein methylation|0006481||;locus_tag=GGE_1107;product=putative isoprenylcysteine carboxyl methyltransferase;protein_id=EGT81673.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 20667 21183 . + . ID=id-GGE_1107;Note=superfamily%3B label: ICMT superfamily;gbkey=misc_feature;locus_tag=GGE_1107 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 20679 20721 . + . ID=id-GGE_1107-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1107 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 20895 20943 . + . ID=id-GGE_1107-3;Dbxref=InterPro:IPR007269,PFAM:PF04140;Note=icmt~isoprenylcysteine carboxyl methyltransferase;gbkey=misc_feature;locus_tag=GGE_1107 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 20721 20886 . - . ID=id-AFQR01000019.1:20721..20886;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 20721 20790 . - . ID=id-AFQR01000019.1:20721..20790;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 21238 21963 . + . ID=gene-GGE_1108;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank CDS 21238 21963 . + 0 ID=cds-EGT81674.1;Parent=gene-GGE_1108;Dbxref=GeneID:81336663,InterPro:IPR005271,InterPro:IPR013216,PFAM:PF08241,PIR:PIRSF006325,TIGRFAM:TIGR00740,NCBI_GP:EGT81674.1;Name=EGT81674.1;Ontology_term=GO:0008152,GO:0002098,GO:0008168,GO:0016300;gbkey=CDS;gene=cmoA;go_function=methyltransferase activity|0008168||,tRNA (uracil) methyltransferase activity|0016300||;go_process=metabolic process|0008152||,tRNA wobble uridine modification|0002098||;locus_tag=GGE_1108;product=tRNA cmo5U34-methyltransferase;protein_id=EGT81674.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21238 21961 . + . ID=id-GGE_1108;Dbxref=InterPro:IPR005271,PIR:PIRSF006325;Note=predicted s-adenosyl-l-methionine dependent small molecule binding methyltransferase%2C yeco type~trna (cmo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21244 21958 . + . ID=id-GGE_1108-2;Dbxref=InterPro:IPR005271;Note=HAMAP:MF_01589~trna_methyltr_cmoa~trna (cmo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21247 21955 . + . ID=id-GGE_1108-3;Dbxref=InterPro:IPR005271,TIGRFAM:TIGR00740;Note=tigr00740: putative methyltransferase~trna (cmo5u34)-methyltransferase;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21250 21913 . + . ID=id-GGE_1108-4;Note=HMMPanther:PTHR10108:SF412~subfamily not named~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21289 21913 . + . ID=id-GGE_1108-5;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21298 21904 . + . ID=id-GGE_1108-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21412 21553 . + . ID=id-GGE_1108-7;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 21421 21541 . + . ID=id-GGE_1108-8;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature;gene=cmoA;locus_tag=GGE_1108 GCA_000222085.2|AFQR01000019.1 Genbank gene 22035 23366 . - . ID=gene-GGE_1109;Name=GGE_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank CDS 22035 23366 . - 0 ID=cds-EGT81675.1;Parent=gene-GGE_1109;Dbxref=GeneID:325579054,InterPro:IPR000849,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00881,NCBI_GP:EGT81675.1;Name=EGT81675.1;Note=ZP_08149010;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1109;product=MFS family major facilitator transporter%2C glycerol-3-phosphate:cation symporter;protein_id=EGT81675.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22035 23343 . - . ID=id-GGE_1109;Note=HMMPanther:PTHR11662:SF13~glycerol-3-phosphate transporter (hexose transporter)~HMMPanther:PTHR11662~family not named;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22041 23346 . - . ID=id-GGE_1109-2;Note=multi-dom%3B label: glpT;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22053 23325 . - . ID=id-GGE_1109-3;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22110 22641 . - . ID=id-GGE_1109-4;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22116 23277 . - . ID=id-GGE_1109-5;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22131 23244 . - . ID=id-GGE_1109-6;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22140 23130 . - . ID=id-GGE_1109-7;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22143 23184 . - . ID=id-GGE_1109-8;Dbxref=InterPro:IPR000849,TIGRFAM:TIGR00881;Note=2a0104: phosphoglycerate transporter family~glpt transporter;gbkey=misc_feature;locus_tag=GGE_1109 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22077 22542 . + . ID=id-AFQR01000019.1:22077..22542;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22083 23181 . + . ID=id-AFQR01000019.1:22083..23181;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22095 22995 . + . ID=id-AFQR01000019.1:22095..22995;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22095 22917 . + . ID=id-AFQR01000019.1:22095..22917;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22095 22800 . + . ID=id-AFQR01000019.1:22095..22800;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22095 22608 . + . ID=id-AFQR01000019.1:22095..22608;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 23283 . + . ID=id-AFQR01000019.1:22104..23283;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 23187 . + . ID=id-AFQR01000019.1:22104..23187;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 23082 . + . ID=id-AFQR01000019.1:22104..23082;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 22530 . + . ID=id-AFQR01000019.1:22104..22530;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 22401 . + . ID=id-AFQR01000019.1:22104..22401;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 22323 . + . ID=id-AFQR01000019.1:22104..22323;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 22236 . + . ID=id-AFQR01000019.1:22104..22236;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22104 22140 . + . ID=id-AFQR01000019.1:22104..22140;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 22614 22779 . + . ID=id-AFQR01000019.1:22614..22779;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 23601 24008 . + . ID=gene-GGE_1110;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank CDS 23601 24008 . + 0 ID=cds-EGT81676.1;Parent=gene-GGE_1110;Dbxref=GeneID:1175222,InterPro:IPR004360,InterPro:IPR004361,InterPro:IPR018146,PFAM:PF00903,TIGRFAM:TIGR00068,NCBI_GP:EGT81676.1;Name=EGT81676.1;Ontology_term=GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||,metal ion binding|0046872||;locus_tag=GGE_1110;product=Lactoylglutathione lyase;protein_id=EGT81676.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23601 23985 . + . ID=id-GGE_1110;Note=superfamily:SSF54593~glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23601 23976 . + . ID=id-GGE_1110-2;Note=HMMPanther:PTHR10374~lactoylglutathione lyase (glyoxalase i);gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23607 24003 . + . ID=id-GGE_1110-3;Dbxref=InterPro:IPR004361,TIGRFAM:TIGR00068;Note=glyox_i: lactoylglutathione lyase~glyoxalase i;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23607 23979 . + . ID=id-GGE_1110-4;Note=Gene3D:3.10.180.10;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23610 23964 . + . ID=id-GGE_1110-5;Dbxref=InterPro:IPR004360,PFAM:PF00903;Note=glyoxalase~glyoxalase/bleomycin resistance protein/dioxygenase;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23613 23964 . + . ID=id-GGE_1110-6;Note=specific~superfamily%3B label: Glo_EDI_BRP_like superfamily;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23616 23667 . + . ID=id-GGE_1110-7;Dbxref=InterPro:IPR018146;Note=PatternScan:PS00934~glyoxalase_i_1~glyoxalase i%2C conserved site;gbkey=misc_feature;gene=gloA;locus_tag=GGE_1110 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 23640 23808 . - . ID=id-AFQR01000019.1:23640..23808;Dbxref=InterPro:IPR018146;Note=PatternScan:PS00935~glyoxalase_i_2~glyoxalase i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 24083 24772 . + . ID=gene-GGE_1111;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank CDS 24083 24772 . + 0 ID=cds-EGT81677.1;Parent=gene-GGE_1111;Dbxref=GeneID:1173107,InterPro:IPR005987,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,TIGRFAM:TIGR01298,NCBI_GP:EGT81677.1;Name=EGT81677.1;Ontology_term=GO:0006396,GO:0003676,GO:0004540;gbkey=CDS;gene=rnt;go_function=nucleic acid binding|0003676||,ribonuclease activity|0004540||;go_process=RNA processing|0006396||;locus_tag=GGE_1111;product=Ribonuclease T;protein_id=EGT81677.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24083 24770 . + . ID=id-GGE_1111;Dbxref=InterPro:IPR005987;Note=HAMAP:MF_00157~rnase_t~ribonuclease t;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24113 24689 . + . ID=id-GGE_1111-2;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24116 24710 . + . ID=id-GGE_1111-3;Note=multi-dom%3B label: DnaQ;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24122 24683 . + . ID=id-GGE_1111-4;Dbxref=InterPro:IPR005987,TIGRFAM:TIGR01298;Note=rnaset: ribonuclease t~ribonuclease t;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24125 24665 . + . ID=id-GGE_1111-5;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24131 24644 . + . ID=id-GGE_1111-6;Note=superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24152 24608 . + . ID=id-GGE_1111-7;Dbxref=InterPro:IPR013520,PFAM:PF00929;Note=exonuc_x-t~exonuclease%2C rnase t/dna polymerase iii;gbkey=misc_feature;gene=rnt;locus_tag=GGE_1111 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24107 24743 . - . ID=id-AFQR01000019.1:24107..24743;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24119 24182 . - . ID=id-AFQR01000019.1:24119..24182;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 24760 24769 . - . ID=id-AFQR01000019.1:24760..24769;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 25091 26443 . + . ID=gene-GGE_1112;Name=GGE_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1112 GCA_000222085.2|AFQR01000019.1 Genbank CDS 25091 26443 . + 0 ID=cds-EGT81678.1;Parent=gene-GGE_1112;Dbxref=InterPro:IPR001991,InterPro:IPR018461,PFAM:PF03553,NCBI_GP:EGT81678.1;Name=EGT81678.1;Note=HI_0325;Ontology_term=GO:0006835,GO:0006885,GO:0006814,GO:0016021,GO:0016020,GO:0017153,GO:0015385;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=sodium:dicarboxylate symporter activity|0017153||,sodium:hydrogen antiporter activity|0015385||;go_process=dicarboxylic acid transport|0006835||,regulation of pH|0006885||,sodium ion transport|0006814||;locus_tag=GGE_1112;product=putative na+/H+ antiporter NhaC-like protein;protein_id=EGT81678.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25109 25202 . + . ID=id-GGE_1112;Note=seg;gbkey=misc_feature;locus_tag=GGE_1112 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25112 25160 . + . ID=id-GGE_1112-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1112 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25220 26315 . + . ID=id-GGE_1112-3;Note=multi-dom%3B label: COG2056;gbkey=misc_feature;locus_tag=GGE_1112 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25547 25970 . + . ID=id-GGE_1112-4;Dbxref=InterPro:IPR018461,PFAM:PF03553;Note=superfamily~na_h_antiporter~na+/h+ antiporter nhac-like%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1112 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25130 26117 . - . ID=id-AFQR01000019.1:25130..26117;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25142 25904 . - . ID=id-AFQR01000019.1:25142..25904;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25145 25901 . - . ID=id-AFQR01000019.1:25145..25901;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25145 25838 . - . ID=id-AFQR01000019.1:25145..25838;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25145 25388 . - . ID=id-AFQR01000019.1:25145..25388;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25151 26240 . - . ID=id-AFQR01000019.1:25151..26240;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25151 25451 . - . ID=id-AFQR01000019.1:25151..25451;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25151 25268 . - . ID=id-AFQR01000019.1:25151..25268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25154 25157 . - . ID=id-AFQR01000019.1:25154..25157;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 26363 . - . ID=id-AFQR01000019.1:25160..26363;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 26219 . - . ID=id-AFQR01000019.1:25160..26219;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 26117 . - . ID=id-AFQR01000019.1:25160..26117;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 25991 . - . ID=id-AFQR01000019.1:25160..25991;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 25682 . - . ID=id-AFQR01000019.1:25160..25682;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 25664 . - . ID=id-AFQR01000019.1:25160..25664;Dbxref=InterPro:IPR001991;Note=FPrintScan:PR00173~edtrnsport~sodium dicarboxylate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 25160 25544 . - . ID=id-AFQR01000019.1:25160..25544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 26419 27063 . + . ID=gene-GGE_1113;Name=GGE_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1113 GCA_000222085.2|AFQR01000019.1 Genbank CDS 26419 27063 . + 0 ID=cds-EGT81679.1;Parent=gene-GGE_1113;Dbxref=GeneID:319775809,InterPro:IPR010890,PFAM:PF07445,NCBI_GP:EGT81679.1;Name=EGT81679.1;Note=YP_004138297;gbkey=CDS;locus_tag=GGE_1113;product=primosomal replication protein N;protein_id=EGT81679.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26479 26968 . + . ID=id-GGE_1113;Note=superfamily%3B label: priB_priC superfamily;gbkey=misc_feature;locus_tag=GGE_1113 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26482 26956 . + . ID=id-GGE_1113-2;Dbxref=InterPro:IPR010890,PFAM:PF07445;Note=prib_pric~primosomal replication prib/pric;gbkey=misc_feature;locus_tag=GGE_1113 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26455 27028 . - . ID=id-AFQR01000019.1:26455..27028;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26485 26611 . - . ID=id-AFQR01000019.1:26485..26611;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26506 26842 . - . ID=id-AFQR01000019.1:26506..26842;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 26575 26584 . - . ID=id-AFQR01000019.1:26575..26584;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 27355 27777 . - . ID=gene-GGE_1114;Name=GGE_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1114 GCA_000222085.2|AFQR01000019.1 Genbank CDS 27355 27777 . - 0 ID=cds-EGT81680.1;Parent=gene-GGE_1114;Dbxref=InterPro:IPR021968,PFAM:PF12111,NCBI_GP:EGT81680.1;Name=EGT81680.1;Note=Hypothetical polyribonucleotide phosphorylase-like protein;gbkey=CDS;locus_tag=GGE_1114;product=putative polyribonucleotide phosphorylase-like protein;protein_id=EGT81680.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27367 27754 . - . ID=id-GGE_1114;Note=multi-dom%3B label: rne;gbkey=misc_feature;locus_tag=GGE_1114 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27469 27658 . + . ID=id-AFQR01000019.1:27469..27658;Dbxref=InterPro:IPR021968,PFAM:PF12111;Note=pnpase_c~polyribonucleotide phosphorylase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27472 27658 . + . ID=id-AFQR01000019.1:27472..27658;Note=superfamily%3B label: PNPase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 27741 30167 . - . ID=gene-GGE_1115;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank CDS 27741 30167 . - 0 ID=cds-EGT81681.1;Parent=gene-GGE_1115;Dbxref=GeneID:1173095,InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR019307,PFAM:PF00575,PFAM:PF10150,TIGRFAM:TIGR00757,NCBI_GP:EGT81681.1;Name=EGT81681.1;Ontology_term=GO:0006396,GO:0005737,GO:0003723,GO:0004540;gbkey=CDS;gene=rne;go_component=cytoplasm|0005737||;go_function=RNA binding|0003723||,ribonuclease activity|0004540||;go_process=RNA processing|0006396||;locus_tag=GGE_1115;product=Ribonuclease E;protein_id=EGT81681.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27741 29475 . - . ID=id-GGE_1115;Note=multi-dom%3B label: rne;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27780 28977 . - . ID=id-GGE_1115-2;Dbxref=InterPro:IPR004659,TIGRFAM:TIGR00757;Note=rnaseeg: ribonuclease%2C rne/rng family~ribonuclease e/g;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27834 28023 . - . ID=id-GGE_1115-3;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27837 28020 . - . ID=id-GGE_1115-4;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27849 27990 . - . ID=id-GGE_1115-5;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27858 28002 . - . ID=id-GGE_1115-6;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27858 27984 . - . ID=id-GGE_1115-7;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 28104 28554 . - . ID=id-GGE_1115-8;Dbxref=InterPro:IPR019307,PFAM:PF10150;Note=rnase_e_g~rna-binding protein au-1/ribonuclease e/g;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 28242 28251 . - . ID=id-GGE_1115-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rne;locus_tag=GGE_1115 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27771 30087 . + . ID=id-AFQR01000019.1:27771..30087;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27783 29817 . + . ID=id-AFQR01000019.1:27783..29817;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27783 29595 . + . ID=id-AFQR01000019.1:27783..29595;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27783 28989 . + . ID=id-AFQR01000019.1:27783..28989;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27792 29712 . + . ID=id-AFQR01000019.1:27792..29712;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27828 29973 . + . ID=id-AFQR01000019.1:27828..29973;Note=multi-dom%3B label: rne;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27831 29499 . + . ID=id-AFQR01000019.1:27831..29499;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 27837 29868 . + . ID=id-AFQR01000019.1:27837..29868;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 28721 28730 . + . ID=id-AFQR01000019.1:28721..28730;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30209 30218 . - . ID=id-AFQR01000019.1:30209..30218;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 30579 31547 . + . ID=gene-GGE_1116;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank CDS 30579 31547 . + 0 ID=cds-EGT81682.1;Parent=gene-GGE_1116;Dbxref=GeneID:1175639,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,InterPro:IPR020103,PFAM:PF00849,PFAM:PF01479,TIGRFAM:TIGR00005,NCBI_GP:EGT81682.1;Name=EGT81682.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_1116;product=Ribosomal large subunit pseudouridine synthase C;protein_id=EGT81682.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30597 31530 . + . ID=id-GGE_1116;Note=multi-dom%3B label: PRK11025;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30624 31500 . + . ID=id-GGE_1116-2;Note=HMMPanther:PTHR10436:SF42~rna pseudouridylate synthase family protein~HMMPanther:PTHR10436~rna pseudouridylate synthase family protein;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30639 31479 . + . ID=id-GGE_1116-3;Dbxref=InterPro:IPR006225,TIGRFAM:TIGR00005;Note=rlua_subfam: pseudouridine synthase%2C rlua~pseudouridine synthase%2C rluc/rlud;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30651 30753 . + . ID=id-GGE_1116-4;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30651 30732 . + . ID=id-GGE_1116-5;Note=Gene3D:3.10.290.10;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30654 30771 . + . ID=id-GGE_1116-6;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30654 30720 . + . ID=id-GGE_1116-7;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=superfamily~s4~rna-binding s4%3B label: S4 superfamily;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30873 31254 . + . ID=id-GGE_1116-8;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30900 31137 . + . ID=id-GGE_1116-9;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30900 31023 . + . ID=id-GGE_1116-10;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=rluC;locus_tag=GGE_1116 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 30624 31014 . - . ID=id-AFQR01000019.1:30624..31014;Dbxref=InterPro:IPR006224;Note=PatternScan:PS01129~psi_rlu~pseudouridine synthase%2C rluc/rlud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 31639 31914 . + . ID=gene-GGE_1117;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank CDS 31639 31914 . + 0 ID=cds-EGT81683.1;Parent=gene-GGE_1117;Dbxref=GeneID:1170268,InterPro:IPR001163,InterPro:IPR005001,InterPro:IPR010920,PFAM:PF01423,TIGRFAM:TIGR02383,NCBI_GP:EGT81683.1;Name=EGT81683.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1117;product=Protein hfq;protein_id=EGT81683.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31639 31867 . + . ID=id-GGE_1117;Note=Gene3D:2.30.30.100;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31648 31858 . + . ID=id-GGE_1117-2;Dbxref=InterPro:IPR005001;Note=HAMAP:MF_00436~lsm_hfq~host factor hfq;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31654 31819 . + . ID=id-GGE_1117-3;Dbxref=InterPro:IPR005001,TIGRFAM:TIGR02383;Note=hfq: rna chaperone hfq~host factor hfq;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31657 31834 . + . ID=id-GGE_1117-4;Dbxref=InterPro:IPR010920;Note=superfamily:SSF50182~sm-like ribonucleoproteins~like-sm ribonucleoprotein (lsm)-related domain;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31666 31813 . + . ID=id-GGE_1117-5;Note=specific~superfamily%3B label: Hfq;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31690 31783 . + . ID=id-GGE_1117-6;Dbxref=InterPro:IPR001163,PFAM:PF01423;Note=lsm~like-sm ribonucleoprotein (lsm) domain;gbkey=misc_feature;gene=hfq;locus_tag=GGE_1117 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31672 31840 . - . ID=id-AFQR01000019.1:31672..31840;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 31929 33290 . + . ID=gene-GGE_1118;Name=GGE_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank CDS 31929 33290 . + 0 ID=cds-EGT81684.1;Parent=gene-GGE_1118;Dbxref=GeneID:325579068,InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR009022,InterPro:IPR016496,PFAM:PF01926,PIR:PIRSF006809,TIGRFAM:TIGR00231,TIGRFAM:TIGR03156,NCBI_GP:EGT81684.1;Name=EGT81684.1;Note=ZP_08149024;Ontology_term=GO:0005622,GO:0005525;gbkey=CDS;go_component=intracellular|0005622||;go_function=GTP binding|0005525||;locus_tag=GGE_1118;product=GTP-binding protein HflX;protein_id=EGT81684.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32022 33162 . + . ID=id-GGE_1118;Dbxref=InterPro:IPR016496,PIR:PIRSF006809;Note=predicted gtp-binding protein%2C hflx type~gtp-binding protein%2C hflx;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32025 32985 . + . ID=id-GGE_1118-2;Dbxref=InterPro:IPR016496,TIGRFAM:TIGR03156;Note=gtp_hflx: gtp-binding protein hflx~gtp-binding protein%2C hflx;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32028 33168 . + . ID=id-GGE_1118-3;Note=multi-dom%3B label: PRK11058;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32028 32970 . + . ID=id-GGE_1118-4;Note=HMMPanther:PTHR10229~gtp-binding protein hflx;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32466 32544 . + . ID=id-GGE_1118-5;Note=specific~superfamily%3B label: HflX;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33065 33074 . + . ID=id-GGE_1118-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1118 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31959 32547 . - . ID=id-AFQR01000019.1:31959..32547;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31979 31988 . - . ID=id-AFQR01000019.1:31979..31988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31986 32796 . - . ID=id-AFQR01000019.1:31986..32796;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31986 32658 . - . ID=id-AFQR01000019.1:31986..32658;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 31992 32595 . - . ID=id-AFQR01000019.1:31992..32595;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32004 32508 . - . ID=id-AFQR01000019.1:32004..32508;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32109 33087 . - . ID=id-AFQR01000019.1:32109..33087;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32259 32622 . - . ID=id-AFQR01000019.1:32259..32622;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32424 32580 . - . ID=id-AFQR01000019.1:32424..32580;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32442 32574 . - . ID=id-AFQR01000019.1:32442..32574;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 32496 32583 . - . ID=id-AFQR01000019.1:32496..32583;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 33302 34258 . - . ID=gene-GGE_1119;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank CDS 33302 34258 . - 0 ID=cds-EGT81685.1;Parent=gene-GGE_1119;Dbxref=GeneID:1174836,InterPro:IPR002078,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00158,NCBI_GP:EGT81685.1;Name=EGT81685.1;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0005524,GO:0003677,GO:0005515,GO:0008134;gbkey=CDS;gene=tyrR;go_component=intracellular|0005622||;go_function=ATP binding|0005524||,DNA binding|0003677||,protein binding|0005515||,transcription factor binding|0008134||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_1119;product=Transcriptional regulatory protein tyrR;protein_id=EGT81685.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33302 34256 . - . ID=id-GGE_1119;Note=multi-dom%3B label: TyrR;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33338 33815 . - . ID=id-GGE_1119-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33344 34025 . - . ID=id-GGE_1119-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33347 34211 . - . ID=id-GGE_1119-4;Note=HMMPanther:PTHR10919:SF203~subfamily not named~HMMPanther:PTHR10919~family not named;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33347 33977 . - . ID=id-GGE_1119-5;Dbxref=InterPro:IPR002078;Note=ProfileScan:PS50045~sigma54_interact_4~rna polymerase sigma factor 54%2C interaction;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33350 33785 . - . ID=id-GGE_1119-6;Dbxref=InterPro:IPR002078,PFAM:PF00158;Note=sigma54_activat~rna polymerase sigma factor 54%2C interaction;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33413 33710 . - . ID=id-GGE_1119-7;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;gene=tyrR;locus_tag=GGE_1119 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33344 33419 . + . ID=id-AFQR01000019.1:33344..33419;Dbxref=InterPro:IPR002078;Note=PatternScan:PS00675~sigma54_interact_1~rna polymerase sigma factor 54%2C interaction;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33473 34088 . + . ID=id-AFQR01000019.1:33473..34088;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33485 34076 . + . ID=id-AFQR01000019.1:33485..34076;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 33527 33851 . + . ID=id-AFQR01000019.1:33527..33851;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34364 34373 . - . ID=id-AFQR01000019.1:34364..34373;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 34381 35847 . - . ID=gene-GGE_1120;Name=GGE_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1120 GCA_000222085.2|AFQR01000019.1 Genbank CDS 34381 35847 . - 0 ID=cds-EGT81686.1;Parent=gene-GGE_1120;Dbxref=GeneID:325579074,InterPro:IPR011055,InterPro:IPR016047,PFAM:PF01551,NCBI_GP:EGT81686.1;Name=EGT81686.1;Note=ZP_08149030;gbkey=CDS;locus_tag=GGE_1120;product=M23 family peptidase;protein_id=EGT81686.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34813 35416 . - . ID=id-GGE_1120;Note=multi-dom%3B label: PRK11649;gbkey=misc_feature;locus_tag=GGE_1120 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34999 35140 . - . ID=id-GGE_1120-2;Dbxref=InterPro:IPR011055;Note=superfamily:SSF51261~protein~protein;gbkey=misc_feature;locus_tag=GGE_1120 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34435 34441 . + . ID=id-AFQR01000019.1:34435..34441;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34672 35458 . + . ID=id-AFQR01000019.1:34672..35458;Dbxref=InterPro:IPR016047,PFAM:PF01551;Note=superfamily~peptidase_m23~peptidase m23%3B label: Peptidase_M23 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34732 35404 . + . ID=id-AFQR01000019.1:34732..35404;Note=HMMPanther:PTHR21666~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 34813 35323 . + . ID=id-AFQR01000019.1:34813..35323;Note=Gene3D:2.70.70.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 36025 36831 . + . ID=gene-GGE_1121;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank CDS 36025 36831 . + 0 ID=cds-EGT81687.1;Parent=gene-GGE_1121;Dbxref=GeneID:81336579,InterPro:IPR003439,InterPro:IPR017871,InterPro:IPR017882,PFAM:PF00005,NCBI_GP:EGT81687.1;Name=EGT81687.1;Ontology_term=GO:0006829,GO:0005886,GO:0005524,GO:0016887,GO:0015633;gbkey=CDS;gene=znuC;go_component=plasma membrane|0005886||;go_function=ATP binding|0005524||,ATPase activity|0016887||,zinc transporting ATPase activity|0015633||;go_process=zinc ion transport|0006829||;locus_tag=GGE_1121;product=Zinc import ATP-binding protein ZnuC;protein_id=EGT81687.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36046 36673 . + . ID=id-GGE_1121;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36061 36778 . + . ID=id-GGE_1121-2;Dbxref=InterPro:IPR017882;Note=ProfileScan:PS51298~znuc~abc transporter%2C zinc import%2C atp-binding protein znuc;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36061 36697 . + . ID=id-GGE_1121-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36064 36706 . + . ID=id-GGE_1121-4;Note=multi-dom%3B label: ZnuC;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36067 36739 . + . ID=id-GGE_1121-5;Note=HMMPanther:PTHR24220:SF228~zinc import atp-binding protein znuc~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36073 36673 . + . ID=id-GGE_1121-6;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36076 36616 . + . ID=id-GGE_1121-7;Note=specific~superfamily%3B label: ABC_Metallic_Cations;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36190 36343 . + . ID=id-GGE_1121-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=znuC;locus_tag=GGE_1121 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36058 36745 . - . ID=id-AFQR01000019.1:36058..36745;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36070 36421 . - . ID=id-AFQR01000019.1:36070..36421;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36073 36178 . - . ID=id-AFQR01000019.1:36073..36178;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 36831 37616 . + . ID=gene-GGE_1122;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank CDS 36831 37616 . + 0 ID=cds-EGT81688.1;Parent=gene-GGE_1122;Dbxref=GeneID:1175840,InterPro:IPR001626,PFAM:PF00950,NCBI_GP:EGT81688.1;Name=EGT81688.1;Ontology_term=GO:0006810,GO:0016020,GO:0005524,GO:0042626;gbkey=CDS;gene=znuB;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||;go_process=transport|0006810||;locus_tag=GGE_1122;product=High-affinity zinc uptake system membrane protein znuB;protein_id=EGT81688.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36831 37605 . + . ID=id-GGE_1122;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;gene=znuB;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36831 37602 . + . ID=id-GGE_1122-2;Dbxref=InterPro:IPR001626,PFAM:PF00950;Note=abc-3~abc-3;gbkey=misc_feature;gene=znuB;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36846 37584 . + . ID=id-GGE_1122-3;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;gene=znuB;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36846 36900 . + . ID=id-GGE_1122-4;Note=transmembrane_regions;gbkey=misc_feature;gene=znuB;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36948 37497 . + . ID=id-GGE_1122-5;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;gene=znuB;locus_tag=GGE_1122 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36861 37431 . - . ID=id-AFQR01000019.1:36861..37431;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36867 37344 . - . ID=id-AFQR01000019.1:36867..37344;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36867 37212 . - . ID=id-AFQR01000019.1:36867..37212;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36876 37005 . - . ID=id-AFQR01000019.1:36876..37005;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36885 37548 . - . ID=id-AFQR01000019.1:36885..37548;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36900 37470 . - . ID=id-AFQR01000019.1:36900..37470;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36900 37341 . - . ID=id-AFQR01000019.1:36900..37341;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36900 37215 . - . ID=id-AFQR01000019.1:36900..37215;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36900 37086 . - . ID=id-AFQR01000019.1:36900..37086;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 36900 36975 . - . ID=id-AFQR01000019.1:36900..36975;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37664 37673 . + . ID=id-AFQR01000019.1:37664..37673;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 37705 38652 . + . ID=gene-GGE_1123;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank CDS 37705 38652 . + 0 ID=cds-EGT81689.1;Parent=gene-GGE_1123;Dbxref=GeneID:81336581,InterPro:IPR001095,InterPro:IPR011763,PFAM:PF03255,TIGRFAM:TIGR00513,NCBI_GP:EGT81689.1;Name=EGT81689.1;Ontology_term=GO:0006633,GO:0009317,GO:0003989,GO:0016874;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||;go_function=acetyl-CoA carboxylase activity|0003989||,ligase activity|0016874||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_1123;product=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;protein_id=EGT81689.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37705 38650 . + . ID=id-GGE_1123;Dbxref=InterPro:IPR001095,TIGRFAM:TIGR00513;Note=superfamily~acca: acetyl-coa carboxylase%2C carboxyl trans~acetyl-coa carboxylase%2C alpha subunit%3B label: ACCA superfamily;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37705 38641 . + . ID=id-GGE_1123-2;Dbxref=InterPro:IPR001095;Note=HMMPanther:PTHR22855:SF3~acetyl-coenzyme a carboxylase carboxyl transferase alpha~acetyl-coa carboxylase%2C alpha subunit~HMMPanther:PTHR22855~family not named;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37705 38611 . + . ID=id-GGE_1123-3;Dbxref=InterPro:IPR011763;Note=ProfileScan:PS50989~coa_ct_cter~acetyl-coenzyme a carboxyltransferase;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37717 38641 . + . ID=id-GGE_1123-4;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37720 38638 . + . ID=id-GGE_1123-5;Dbxref=InterPro:IPR001095;Note=HAMAP:MF_00823~acetylcoa_ct_alpha~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37720 38134 . + . ID=id-GGE_1123-6;Dbxref=InterPro:IPR001095,PFAM:PF03255;Note=acca~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37741 37822 . + . ID=id-GGE_1123-7;Note=coiled-coil;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37888 38335 . + . ID=id-GGE_1123-8;Note=Gene3D:3.90.226.10;gbkey=misc_feature;gene=accA;locus_tag=GGE_1123 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37735 38293 . - . ID=id-AFQR01000019.1:37735..38293;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37741 37966 . - . ID=id-AFQR01000019.1:37741..37966;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37747 38209 . - . ID=id-AFQR01000019.1:37747..38209;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37747 38161 . - . ID=id-AFQR01000019.1:37747..38161;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37753 38290 . - . ID=id-AFQR01000019.1:37753..38290;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37756 38104 . - . ID=id-AFQR01000019.1:37756..38104;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37762 38041 . - . ID=id-AFQR01000019.1:37762..38041;Dbxref=InterPro:IPR001095;Note=FPrintScan:PR01069~accctrfrasea~acetyl-coa carboxylase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 37771 38542 . - . ID=id-AFQR01000019.1:37771..38542;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 38726 39592 . + . ID=gene-GGE_1124;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=GGE_1124 GCA_000222085.2|AFQR01000019.1 Genbank CDS 38726 39592 . + 0 ID=cds-EGT81690.1;Parent=gene-GGE_1124;Dbxref=InterPro:IPR004625,InterPro:IPR013749,PFAM:PF08543,TIGRFAM:TIGR00687,NCBI_GP:EGT81690.1;Name=EGT81690.1;Ontology_term=GO:0008615,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||;go_process=pyridoxine biosynthetic process|0008615||;locus_tag=GGE_1124;product=Pyridoxamine kinase;protein_id=EGT81690.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 38726 39590 . + . ID=id-GGE_1124;Dbxref=InterPro:IPR004625,TIGRFAM:TIGR00687;Note=pyridox_kin: pyridoxal kinase~pyridoxal phosphate (active vitamin b6) biosynthesis%2C pyridoxal kinase;gbkey=misc_feature;gene=pdxY;locus_tag=GGE_1124 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 38726 39587 . + . ID=id-GGE_1124-2;Note=HAMAP:MF_01639~pdxy~superfamily:SSF53613~ribokinase-like~Gene3D:3.40.1190.20~HMMPanther:PTHR10534~pyridoxal kinase;gbkey=misc_feature;gene=pdxY;locus_tag=GGE_1124 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 38735 39500 . + . ID=id-GGE_1124-3;Note=specific~superfamily%3B label: pyridoxal_pyridoxamine_kinase;gbkey=misc_feature;gene=pdxY;locus_tag=GGE_1124 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 38912 39326 . + . ID=id-GGE_1124-4;Dbxref=InterPro:IPR013749,PFAM:PF08543;Note=phos_pyr_kin~phosphomethylpyrimidine kinase type-1;gbkey=misc_feature;gene=pdxY;locus_tag=GGE_1124 GCA_000222085.2|AFQR01000019.1 Genbank gene 39592 40887 . + . ID=gene-GGE_1125;Name=GGE_1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank CDS 39592 40887 . + 0 ID=cds-EGT81691.1;Parent=gene-GGE_1125;Dbxref=GeneID:301155698,InterPro:IPR011063,InterPro:IPR012094,InterPro:IPR012795,InterPro:IPR012796,InterPro:IPR014729,InterPro:IPR015262,InterPro:IPR020825,PFAM:PF01171,PFAM:PF09179,PFAM:PF11734,TIGRFAM:TIGR02432,TIGRFAM:TIGR02433,NCBI_GP:EGT81691.1;Name=EGT81691.1;Note=CBW15166;Ontology_term=GO:0008033,GO:0006412,GO:0005737,GO:0005524,GO:0016879,GO:0000166;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,ligase activity forming carbon-nitrogen bonds|0016879||,nucleotide binding|0000166||;go_process=tRNA processing|0008033||,translation|0006412||;locus_tag=GGE_1125;product=tRNAIle-lysidine synthetase;protein_id=EGT81691.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39604 40492 . + . ID=id-GGE_1125;Dbxref=InterPro:IPR012094;Note=HAMAP:MF_01161~trna_ile__lys_synt~lysidine-trna(ile) synthetase;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39640 40231 . + . ID=id-GGE_1125-2;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39643 40816 . + . ID=id-GGE_1125-3;Dbxref=InterPro:IPR012094;Note=HMMPanther:PTHR11807:SF2~cell cycle protein mesj~lysidine-trna(ile) synthetase~HMMPanther:PTHR11807~family not named;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39643 40810 . + . ID=id-GGE_1125-4;Note=multi-dom%3B label: tilS;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39643 40138 . + . ID=id-GGE_1125-5;Dbxref=InterPro:IPR012795,TIGRFAM:TIGR02432;Note=specific~superfamily~lysidine_tils_n: trna(ile)-lysidine s~lysidine-trna(ile) synthetase%3B label: AANH_like superfamily;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39643 40129 . + . ID=id-GGE_1125-6;Dbxref=InterPro:IPR011063,PFAM:PF01171;Note=atp_bind_3~trna(ile)-lysidine/2-thiocytidine synthase;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39643 40072 . + . ID=id-GGE_1125-7;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 40837 40846 . + . ID=id-GGE_1125-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1125 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39730 40696 . - . ID=id-AFQR01000019.1:39730..40696;Dbxref=InterPro:IPR012796,TIGRFAM:TIGR02433;Note=lysidine_tils_c: trna(ile)-lysidine s~lysidine-trna(ile) synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39757 40696 . - . ID=id-AFQR01000019.1:39757..40696;Dbxref=InterPro:IPR012796,PFAM:PF11734;Note=superfamily~tils_c~lysidine-trna(ile) synthetase%3B label: B3_4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39796 40327 . - . ID=id-AFQR01000019.1:39796..40327;Dbxref=InterPro:IPR015262,PFAM:PF09179;Note=tils~lysidine-trna(ile) synthetase%2C substrate-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39799 40324 . - . ID=id-AFQR01000019.1:39799..40324;Note=superfamily%3B label: TilS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39859 40279 . - . ID=id-AFQR01000019.1:39859..40279;Note=superfamily:SSF82829~mesj substrate recognition domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 39910 40543 . - . ID=id-AFQR01000019.1:39910..40543;Dbxref=InterPro:IPR020825;Note=superfamily:SSF56037~phet/tils domain~phenylalanyl-trna synthetase%2C b3/b4;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 40968 41585 . + . ID=gene-GGE_1126;Name=GGE_1126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1126 GCA_000222085.2|AFQR01000019.1 Genbank CDS 40968 41585 . + 0 ID=cds-EGT81692.1;Parent=gene-GGE_1126;Dbxref=GeneID:322514828,InterPro:IPR002771,PFAM:PF01914,TIGRFAM:TIGR00427,NCBI_GP:EGT81692.1;Name=EGT81692.1;Note=ZP_08067847;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_1126;product=membrane protein MarC;protein_id=EGT81692.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 40968 41571 . + . ID=id-GGE_1126;Note=superfamily%3B label: MarC superfamily;gbkey=misc_feature;locus_tag=GGE_1126 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 40968 41559 . + . ID=id-GGE_1126-2;Dbxref=InterPro:IPR002771,TIGRFAM:TIGR00427;Note=tigr00427: membrane protein%2C marc family~multiple antibiotic resistance (marc)-related;gbkey=misc_feature;locus_tag=GGE_1126 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 40980 41559 . + . ID=id-GGE_1126-3;Dbxref=InterPro:IPR002771,PFAM:PF01914;Note=marc~multiple antibiotic resistance (marc)-related;gbkey=misc_feature;locus_tag=GGE_1126 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 40983 41037 . + . ID=id-GGE_1126-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1126 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41004 41415 . - . ID=id-AFQR01000019.1:41004..41415;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41010 41118 . - . ID=id-AFQR01000019.1:41010..41118;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41028 41184 . - . ID=id-AFQR01000019.1:41028..41184;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41037 41493 . - . ID=id-AFQR01000019.1:41037..41493;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41037 41388 . - . ID=id-AFQR01000019.1:41037..41388;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41037 41292 . - . ID=id-AFQR01000019.1:41037..41292;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41037 41088 . - . ID=id-AFQR01000019.1:41037..41088;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 41604 42275 . - . ID=gene-GGE_1127;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank CDS 41604 42275 . - 0 ID=cds-EGT81693.1;Parent=gene-GGE_1127;Dbxref=InterPro:IPR004230,InterPro:IPR011335,InterPro:IPR011337,PFAM:PF02976,TIGRFAM:TIGR02248,NCBI_GP:EGT81693.1;Name=EGT81693.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;gene=mutH;go_function=DNA binding|0003677||,endonuclease activity|0004519||;go_process=DNA modification|0006304||;locus_tag=GGE_1127;product=DNA mismatch repair protein mutH;protein_id=EGT81693.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41604 42273 . - . ID=id-GGE_1127;Dbxref=InterPro:IPR004230;Note=HAMAP:MF_00759~muth~dna mismatch repair protein muth;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41604 42258 . - . ID=id-GGE_1127-2;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41610 42255 . - . ID=id-GGE_1127-3;Dbxref=InterPro:IPR004230,TIGRFAM:TIGR02248;Note=muth_tigr: dna mismatch repair endonuclease~dna mismatch repair protein muth;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41613 42252 . - . ID=id-GGE_1127-4;Dbxref=InterPro:IPR011337;Note=Gene3D:3.40.600.10~dna mismatch repair muth/restriction endonuclease%2C type ii;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41631 42234 . - . ID=id-GGE_1127-5;Note=specific~superfamily%3B label: MutH_Sau3AI;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 41757 41901 . - . ID=id-GGE_1127-6;Dbxref=InterPro:IPR011337,PFAM:PF02976;Note=muth~dna mismatch repair muth/restriction endonuclease%2C type ii;gbkey=misc_feature;gene=mutH;locus_tag=GGE_1127 GCA_000222085.2|AFQR01000019.1 Genbank gene 42272 42811 . - . ID=gene-GGE_1128;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank CDS 42272 42811 . - 0 ID=cds-EGT81694.1;Parent=gene-GGE_1128;Dbxref=GeneID:47117798,InterPro:IPR001497,InterPro:IPR008332,InterPro:IPR011991,InterPro:IPR014048,PFAM:PF01035,PFAM:PF02870,TIGRFAM:TIGR00589,NCBI_GP:EGT81694.1;Name=EGT81694.1;Ontology_term=GO:0006281,GO:0003824,GO:0003908;gbkey=CDS;gene=ogt;go_function=catalytic activity|0003824||,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||;go_process=DNA repair|0006281||;locus_tag=GGE_1128;product=Methylated-DNA--protein-cysteine methyltransferase;protein_id=EGT81694.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42281 42515 . - . ID=id-GGE_1128;Note=superfamily:SSF53155~methylated dna-protein cysteine methyltransferase domain~Gene3D:3.30.160.70;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42281 42491 . - . ID=id-GGE_1128-2;Note=superfamily%3B label: Methyltransf_1N superfamily;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42281 42488 . - . ID=id-GGE_1128-3;Dbxref=InterPro:IPR008332,PFAM:PF02870;Note=methyltransf_1n~methylguanine dna methyltransferase%2C ribonuclease-like;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42287 42734 . - . ID=id-GGE_1128-4;Note=multi-dom%3B label: PRK00901;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42452 42590 . - . ID=id-GGE_1128-5;Note=HMMPanther:PTHR10815~methylated-dna--protein-cysteine methyltransferase;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42503 42527 . - . ID=id-GGE_1128-6;Dbxref=InterPro:IPR014048;Note=superfamily:SSF46767~methylated dna-protein cysteine methyltransferase domain~methylated-dna-[protein]-cysteine s-methyltransferase%2C dna binding;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42506 42512 . - . ID=id-GGE_1128-7;Dbxref=InterPro:IPR014048,TIGRFAM:TIGR00589;Note=ogt: methylated-dna-[protein]-cysteine s-met~methylated-dna-[protein]-cysteine s-methyltransferase%2C dna binding;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42509 42518 . - . ID=id-GGE_1128-8;Dbxref=InterPro:IPR014048,PFAM:PF01035;Note=dna_binding_1~methylated-dna-[protein]-cysteine s-methyltransferase%2C dna binding;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42648 42657 . - . ID=id-GGE_1128-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ogt;locus_tag=GGE_1128 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42293 42656 . + . ID=id-AFQR01000019.1:42293..42656;Dbxref=InterPro:IPR001497;Note=PatternScan:PS00374~mgmt~methylated-dna-[protein]-cysteine s-methyltransferase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42509 42512 . + . ID=id-AFQR01000019.1:42509..42512;Note=specific~superfamily%3B label: ATase;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42515 42524 . + . ID=id-AFQR01000019.1:42515..42524;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42798 42807 . + . ID=id-AFQR01000019.1:42798..42807;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 42888 44273 . - . ID=gene-GGE_1129;Name=GGE_1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1129 GCA_000222085.2|AFQR01000019.1 Genbank CDS 42888 44273 . - 0 ID=cds-EGT81695.1;Parent=gene-GGE_1129;Dbxref=GeneID:145630426,InterPro:IPR005017,InterPro:IPR011250,PFAM:PF03349,NCBI_GP:EGT81695.1;Name=EGT81695.1;Note=ZP_01786207;Ontology_term=GO:0009279,GO:0016021;gbkey=CDS;go_component=cell outer membrane|0009279||,integral to membrane|0016021||;locus_tag=GGE_1129;product=Outer membrane protein P1 precursor;protein_id=EGT81695.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42999 44163 . - . ID=id-GGE_1129;Dbxref=InterPro:IPR005017,PFAM:PF03349;Note=toluene_x~membrane protein%2C aromatic hydrocarbon degradation;gbkey=misc_feature;locus_tag=GGE_1129 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 43026 44136 . - . ID=id-GGE_1129-2;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_1129 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 43044 44118 . - . ID=id-GGE_1129-3;Note=superfamily~multi-dom%3B label: FadL;gbkey=misc_feature;locus_tag=GGE_1129 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 43275 43326 . - . ID=id-GGE_1129-4;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_1129 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42939 43395 . + . ID=id-AFQR01000019.1:42939..43395;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 42948 42984 . + . ID=id-AFQR01000019.1:42948..42984;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 43347 43815 . + . ID=id-AFQR01000019.1:43347..43815;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 44412 44699 . + . ID=gene-GGE_1130;Name=GGE_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1130 GCA_000222085.2|AFQR01000019.1 Genbank CDS 44412 44699 . + 0 ID=cds-EGT81696.1;Parent=gene-GGE_1130;Dbxref=GeneID:1176328,InterPro:IPR005272,PFAM:PF04175,TIGRFAM:TIGR00743,NCBI_GP:EGT81696.1;Name=EGT81696.1;Note=HI_0400;gbkey=CDS;locus_tag=GGE_1130;product=UPF0381 protein;protein_id=EGT81696.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44412 44697 . + . ID=id-GGE_1130;Dbxref=InterPro:IPR005272,TIGRFAM:TIGR00743;Note=superfamily~tigr00743: conserved hypothetical protein~conserved hypothetical protein chp00743%3B label: DUF406 superfamily;gbkey=misc_feature;locus_tag=GGE_1130 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44457 44655 . + . ID=id-GGE_1130-2;Note=Gene3D:3.30.70.860;gbkey=misc_feature;locus_tag=GGE_1130 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44460 44652 . + . ID=id-GGE_1130-3;Dbxref=InterPro:IPR005272,PFAM:PF04175;Note=duf406~conserved hypothetical protein chp00743;gbkey=misc_feature;locus_tag=GGE_1130 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44478 44526 . - . ID=id-AFQR01000019.1:44478..44526;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44716 44725 . - . ID=id-AFQR01000019.1:44716..44725;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44730 44739 . + . ID=id-AFQR01000019.1:44730..44739;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 44838 45875 . + . ID=gene-GGE_1131;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank CDS 44838 45875 . + 0 ID=cds-EGT81697.1;Parent=gene-GGE_1131;Dbxref=InterPro:IPR000728,InterPro:IPR004733,InterPro:IPR010918,InterPro:IPR016188,PFAM:PF00586,PFAM:PF02769,TIGRFAM:TIGR00878,NCBI_GP:EGT81697.1;Name=EGT81697.1;Ontology_term=GO:0006189,GO:0005737,GO:0003824,GO:0004641;gbkey=CDS;gene=purM;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||;go_process='de novo' IMP biosynthetic process|0006189||;locus_tag=GGE_1131;product=Phosphoribosylformylglycinamidine cyclo-ligase;protein_id=EGT81697.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44850 45336 . + . ID=id-GGE_1131;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44853 45858 . + . ID=id-GGE_1131-2;Note=HMMPanther:PTHR24649:SF12~subfamily not named~HMMPanther:PTHR24649~family not named;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44856 45828 . + . ID=id-GGE_1131-3;Dbxref=InterPro:IPR004733,TIGRFAM:TIGR00878;Note=purm: phosphoribosylformylglycinamidine cycl~phosphoribosylformylglycinamidine cyclo-ligase;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44856 45819 . + . ID=id-GGE_1131-4;Note=multi-dom%3B label: PRK05385;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44901 45285 . + . ID=id-GGE_1131-5;Note=Gene3D:3.30.1330.10;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44955 45723 . + . ID=id-GGE_1131-6;Note=specific~superfamily%3B label: PurM;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44973 45129 . + . ID=id-GGE_1131-7;Dbxref=InterPro:IPR000728,PFAM:PF00586;Note=airs~air synthase-related protein;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45348 45363 . + . ID=id-GGE_1131-8;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45348 45360 . + . ID=id-GGE_1131-9;Note=Gene3D:3.90.650.10;gbkey=misc_feature;gene=purM;locus_tag=GGE_1131 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 44865 45180 . - . ID=id-AFQR01000019.1:44865..45180;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45330 45363 . - . ID=id-AFQR01000019.1:45330..45363;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45931 45940 . + . ID=id-AFQR01000019.1:45931..45940;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45949 45958 . - . ID=id-AFQR01000019.1:45949..45958;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 45967 46791 . - . ID=gene-GGE_1132;Name=icc;gbkey=Gene;gene=icc;gene_biotype=protein_coding;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank CDS 45967 46791 . - 0 ID=cds-EGT81698.1;Parent=gene-GGE_1132;Dbxref=GeneID:1170472,InterPro:IPR004843,InterPro:IPR013622,PFAM:PF00149,PFAM:PF08413,NCBI_GP:EGT81698.1;Name=EGT81698.1;Ontology_term=GO:0016787;gbkey=CDS;gene=icc;go_function=hydrolase activity|0016787||;locus_tag=GGE_1132;product=Protein icc;protein_id=EGT81698.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45967 46789 . - . ID=id-GGE_1132;Note=multi-dom%3B label: PRK11148;gbkey=misc_feature;gene=icc;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45997 46714 . - . ID=id-GGE_1132-2;Note=Gene3D:3.60.21.10;gbkey=misc_feature;gene=icc;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46009 46699 . - . ID=id-GGE_1132-3;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;gene=icc;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46009 46543 . - . ID=id-GGE_1132-4;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=metallophos~metallo-dependent phosphatase;gbkey=misc_feature;gene=icc;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46012 46681 . - . ID=id-GGE_1132-5;Note=specific~superfamily%3B label: MPP_GpdQ;gbkey=misc_feature;gene=icc;locus_tag=GGE_1132 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 45994 46444 . + . ID=id-AFQR01000019.1:45994..46444;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46081 46603 . + . ID=id-AFQR01000019.1:46081..46603;Dbxref=InterPro:IPR013622,PFAM:PF08413;Note=metallophos_c~calcineurin-like phosphoesterase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46135 46582 . + . ID=id-AFQR01000019.1:46135..46582;Dbxref=InterPro:IPR013622;Note=BlastProDom:PD587589~icc_haein_p44685~calcineurin-like phosphoesterase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 46801 47463 . - . ID=gene-GGE_1133;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank CDS 46801 47463 . - 0 ID=cds-EGT81699.1;Parent=gene-GGE_1133;Dbxref=GeneID:1177043,InterPro:IPR000086,InterPro:IPR004385,InterPro:IPR015797,InterPro:IPR020084,PFAM:PF00293,TIGRFAM:TIGR00052,NCBI_GP:EGT81699.1;Name=EGT81699.1;Ontology_term=GO:0016818,GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity acting on acid anhydrides in phosphorus-containing anhydrides|0016818||,hydrolase activity|0016787||,metal ion binding|0046872||;locus_tag=GGE_1133;product=ADP-ribose pyrophosphatase;protein_id=EGT81699.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46822 47437 . - . ID=id-GGE_1133;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46855 47401 . - . ID=id-GGE_1133-2;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46855 47380 . - . ID=id-GGE_1133-3;Note=HMMPanther:PTHR11839~family not named;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46861 47368 . - . ID=id-GGE_1133-4;Dbxref=InterPro:IPR004385,TIGRFAM:TIGR00052;Note=multi-dom~tigr00052: nudix-type nucleoside diphosphat~nucleoside diphosphate pyrophosphatase%3B label: TIGR00052;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46984 47242 . - . ID=id-GGE_1133-5;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46987 47245 . - . ID=id-GGE_1133-6;Note=specific~superfamily%3B label: ADPRase_NUDT5;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46996 47197 . - . ID=id-GGE_1133-7;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;gene=nudF;locus_tag=GGE_1133 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46834 47146 . + . ID=id-AFQR01000019.1:46834..47146;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 46867 47119 . + . ID=id-AFQR01000019.1:46867..47119;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 47630 48949 . - . ID=gene-GGE_1134;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank CDS 47630 48949 . - 0 ID=cds-EGT81700.1;Parent=gene-GGE_1134;Dbxref=GeneID:81336588,InterPro:IPR003753,InterPro:IPR004365,InterPro:IPR020579,PFAM:PF01336,PFAM:PF02601,TIGRFAM:TIGR00237,NCBI_GP:EGT81700.1;Name=EGT81700.1;Ontology_term=GO:0006308,GO:0009318,GO:0008855,GO:0003676;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||;go_function=exodeoxyribonuclease VII activity|0008855||,nucleic acid binding|0003676||;go_process=DNA catabolic process|0006308||;locus_tag=GGE_1134;product=Exodeoxyribonuclease 7 large subunit;protein_id=EGT81700.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47639 48941 . - . ID=id-GGE_1134;Dbxref=InterPro:IPR003753;Note=HAMAP:MF_00378~exonuc_7_l~exonuclease vii%2C large subunit;gbkey=misc_feature;gene=xseA;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47651 48926 . - . ID=id-GGE_1134-2;Dbxref=InterPro:IPR003753,TIGRFAM:TIGR00237;Note=multi-dom~xsea: exodeoxyribonuclease vii%2C large subuni~exonuclease vii%2C large subunit%3B label: xseA;gbkey=misc_feature;gene=xseA;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47705 47864 . - . ID=id-GGE_1134-3;Note=specific~superfamily%3B label: ExoVII_LU_OBF;gbkey=misc_feature;gene=xseA;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47711 47849 . - . ID=id-GGE_1134-4;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature;gene=xseA;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47996 48581 . - . ID=id-GGE_1134-5;Dbxref=InterPro:IPR020579,PFAM:PF02601;Note=exonuc_vii_l~exonuclease vii%2C large subunit;gbkey=misc_feature;gene=xseA;locus_tag=GGE_1134 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47666 48428 . + . ID=id-AFQR01000019.1:47666..48428;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47696 48689 . + . ID=id-AFQR01000019.1:47696..48689;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 47928 47937 . + . ID=id-AFQR01000019.1:47928..47937;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 48547 48556 . + . ID=id-AFQR01000019.1:48547..48556;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 49102 50316 . - . ID=gene-GGE_1135;Name=GGE_1135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank CDS 49102 50316 . - 0 ID=cds-EGT81701.1;Parent=gene-GGE_1135;Dbxref=GeneID:1175655,InterPro:IPR003347,InterPro:IPR013109,InterPro:IPR022777,PFAM:PF08007,NCBI_GP:EGT81701.1;Name=EGT81701.1;Note=HI_0396;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_1135;product=putative transcription factor jumonji/aspartyl beta-hydroxylase;protein_id=EGT81701.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49102 50314 . - . ID=id-GGE_1135;Note=multi-dom%3B label: COG2850;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49123 49942 . - . ID=id-GGE_1135-2;Note=superfamily:SSF51197~clavaminate synthase-like;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49147 49681 . - . ID=id-GGE_1135-3;Dbxref=InterPro:IPR013109;Note=HMMPanther:PTHR13096~family not named~cupin 4;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49153 50038 . - . ID=id-GGE_1135-4;Dbxref=InterPro:IPR022777,PFAM:PF08007;Note=cupin_4~cupin%2C jmjc-type;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49402 49480 . - . ID=id-GGE_1135-5;Note=superfamily%3B label: Cupin_2 superfamily;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 49408 49492 . - . ID=id-GGE_1135-6;Dbxref=InterPro:IPR003347;Note=ProfileScan:PS51184~jmjc~transcription factor jumonji/aspartyl beta-hydroxylase;gbkey=misc_feature;locus_tag=GGE_1135 GCA_000222085.2|AFQR01000019.1 Genbank gene 50319 50744 . - . ID=gene-GGE_1136;Name=GGE_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank CDS 50319 50744 . - 0 ID=cds-EGT81702.1;Parent=gene-GGE_1136;Dbxref=InterPro:IPR005346,PFAM:PF03658,NCBI_GP:EGT81702.1;Name=EGT81702.1;Note=Hypothetical Hypothetical protein family UPF0125;gbkey=CDS;locus_tag=GGE_1136;product=putative Hypothetical protein family UPF0125;protein_id=EGT81702.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50355 50376 . - . ID=id-GGE_1136;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50436 50592 . - . ID=id-GGE_1136-2;Note=Gene3D:3.10.20.280;gbkey=misc_feature;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50445 50562 . - . ID=id-GGE_1136-3;Note=superfamily%3B label: UPF0125 superfamily;gbkey=misc_feature;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50454 50583 . - . ID=id-GGE_1136-4;Dbxref=InterPro:IPR005346;Note=HAMAP:MF_00460~upf0125_rnfh~uncharacterised protein family upf0125;gbkey=misc_feature;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50454 50571 . - . ID=id-GGE_1136-5;Dbxref=InterPro:IPR005346,PFAM:PF03658;Note=upf0125~uncharacterised protein family upf0125;gbkey=misc_feature;locus_tag=GGE_1136 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50376 50688 . + . ID=id-AFQR01000019.1:50376..50688;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50671 50680 . + . ID=id-AFQR01000019.1:50671..50680;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 50792 51127 . + . ID=gene-GGE_1137;Name=GGE_1137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank CDS 50792 51127 . + 0 ID=cds-EGT81703.1;Parent=gene-GGE_1137;Dbxref=GeneID:325578758,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT81703.1;Name=EGT81703.1;Note=ZP_08148805;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1137;product=membrane protein;protein_id=EGT81703.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50792 51125 . + . ID=id-GGE_1137;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50798 51116 . + . ID=id-GGE_1137-2;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50813 50846 . + . ID=id-GGE_1137-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50834 51086 . + . ID=id-GGE_1137-4;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50915 51005 . + . ID=id-GGE_1137-5;Note=HMMPanther:PTHR22911~family not named;gbkey=misc_feature;locus_tag=GGE_1137 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50831 51020 . - . ID=id-AFQR01000019.1:50831..51020;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50852 51065 . - . ID=id-AFQR01000019.1:50852..51065;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50861 50987 . - . ID=id-AFQR01000019.1:50861..50987;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 50861 50894 . - . ID=id-AFQR01000019.1:50861..50894;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 51967 52551 . + . ID=gene-GGE_1138;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank CDS 51967 52551 . + 0 ID=cds-EGT81704.1;Parent=gene-GGE_1138;Dbxref=GeneID:1172722,InterPro:IPR001328,InterPro:IPR018171,PFAM:PF01195,TIGRFAM:TIGR00447,NCBI_GP:EGT81704.1;Name=EGT81704.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||;go_process=translation|0006412||;locus_tag=GGE_1138;product=Peptidyl-tRNA hydrolase;protein_id=EGT81704.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51973 52543 . + . ID=id-GGE_1138;Dbxref=InterPro:IPR001328;Note=superfamily:SSF53178~peptidyl-trna hydrolase-like~peptidyl-trna hydrolase~Gene3D:3.40.50.1470~peptidyl-trna hydrolase;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51979 52537 . + . ID=id-GGE_1138-2;Dbxref=InterPro:IPR001328;Note=HMMPanther:PTHR17224~family not named~peptidyl-trna hydrolase;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51979 52531 . + . ID=id-GGE_1138-3;Dbxref=InterPro:IPR001328,TIGRFAM:TIGR00447;Note=pth: peptidyl-trna hydrolase~peptidyl-trna hydrolase;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51979 52507 . + . ID=id-GGE_1138-4;Dbxref=InterPro:IPR001328;Note=HAMAP:MF_00083~pept_trna_hydro_bact~peptidyl-trna hydrolase;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51985 52522 . + . ID=id-GGE_1138-5;Dbxref=InterPro:IPR001328,PFAM:PF01195;Note=pept_trna_hydro~peptidyl-trna hydrolase;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51985 52483 . + . ID=id-GGE_1138-6;Note=specific~superfamily%3B label: PTH;gbkey=misc_feature;gene=pth;locus_tag=GGE_1138 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 51994 52294 . - . ID=id-AFQR01000019.1:51994..52294;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52000 52300 . - . ID=id-AFQR01000019.1:52000..52300;Dbxref=InterPro:IPR018171;Note=PatternScan:PS01196~pept_trna_hydrol_2~peptidyl-trna hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52009 52018 . - . ID=id-AFQR01000019.1:52009..52018;Dbxref=InterPro:IPR018171;Note=PatternScan:PS01195~pept_trna_hydrol_1~peptidyl-trna hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52550 52559 . + . ID=id-AFQR01000019.1:52550..52559;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 52600 53691 . + . ID=gene-GGE_1139;Name=engD;gbkey=Gene;gene=engD;gene_biotype=protein_coding;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank CDS 52600 53691 . + 0 ID=cds-EGT81705.1;Parent=gene-GGE_1139;Dbxref=GeneID:1175666,InterPro:IPR002917,InterPro:IPR004396,InterPro:IPR006073,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR013029,InterPro:IPR023192,PFAM:PF01926,PFAM:PF06071,PIR:PIRSF006641,TIGRFAM:TIGR00092,NCBI_GP:EGT81705.1;Name=EGT81705.1;Ontology_term=GO:0005622,GO:0005525;gbkey=CDS;gene=engD;go_component=intracellular|0005622||;go_function=GTP binding|0005525||;locus_tag=GGE_1139;product=GTP-dependent nucleic acid-binding protein engD;protein_id=EGT81705.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52600 53689 . + . ID=id-GGE_1139;Dbxref=InterPro:IPR004396,PIR:PIRSF006641,TIGRFAM:TIGR00092;Note=multi-dom~predicted gtp-dependent nucleic acid-binding protein%2C engd type~conserved hypothetical protein chp00092~tigr00092: gtp-binding protein ychf~conserved hypothetical protein chp00092~HMMPanther:PTHR23305:SF4~gtp-binding protein~conserved hypothetical protein chp00092~HMMPanther:PTHR23305~family not named%3B label: PRK09601;gbkey=misc_feature;gene=engD;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52600 53434 . + . ID=id-GGE_1139-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=engD;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52615 53419 . + . ID=id-GGE_1139-3;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=engD;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52615 52663 . + . ID=id-GGE_1139-4;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature;gene=engD;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52642 52951 . + . ID=id-GGE_1139-5;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature;gene=engD;locus_tag=GGE_1139 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52648 52810 . - . ID=id-AFQR01000019.1:52648..52810;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52657 52861 . - . ID=id-AFQR01000019.1:52657..52861;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52657 52678 . - . ID=id-AFQR01000019.1:52657..52678;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52687 52990 . - . ID=id-AFQR01000019.1:52687..52990;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52816 52957 . - . ID=id-AFQR01000019.1:52816..52957;Dbxref=InterPro:IPR023192;Note=Gene3D:1.10.150.300~tgs-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52831 53173 . - . ID=id-AFQR01000019.1:52831..53173;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52846 53437 . - . ID=id-AFQR01000019.1:52846..53437;Dbxref=InterPro:IPR012676;Note=superfamily:SSF81271~tgs-like~tgs-like;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52849 53437 . - . ID=id-AFQR01000019.1:52849..53437;Note=specific~superfamily%3B label: TGS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52852 53437 . - . ID=id-AFQR01000019.1:52852..53437;Dbxref=InterPro:IPR013029,PFAM:PF06071;Note=ychf-gtpase_c~domain of unknown function duf933;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 52888 53404 . - . ID=id-AFQR01000019.1:52888..53404;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 53707 53716 . - . ID=id-AFQR01000019.1:53707..53716;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 53764 53958 . + . ID=gene-GGE_1140;Name=GGE_1140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1140 GCA_000222085.2|AFQR01000019.1 Genbank CDS 53764 53958 . + 0 ID=cds-EGT81706.1;Parent=gene-GGE_1140;Dbxref=NCBI_GP:EGT81706.1;Name=EGT81706.1;Note=Hypothetical acyltransferase;gbkey=CDS;locus_tag=GGE_1140;product=putative acyltransferase;protein_id=EGT81706.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 53764 53932 . + . ID=id-GGE_1140;Note=superfamily%3B label: COG1835 superfamily;gbkey=misc_feature;locus_tag=GGE_1140 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 53764 53926 . + . ID=id-GGE_1140-2;Note=HMMPanther:PTHR23028:SF7~acyltransferase~HMMPanther:PTHR23028~family not named;gbkey=misc_feature;locus_tag=GGE_1140 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 53833 53863 . - . ID=id-AFQR01000019.1:53833..53863;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 54011 54325 . + . ID=gene-GGE_1141;Name=GGE_1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1141 GCA_000222085.2|AFQR01000019.1 Genbank CDS 54011 54325 . + 0 ID=cds-EGT81707.1;Parent=gene-GGE_1141;Dbxref=NCBI_GP:EGT81707.1;Name=EGT81707.1;Note=Hypothetical acyltransferase;gbkey=CDS;locus_tag=GGE_1141;product=putative acyltransferase;protein_id=EGT81707.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54011 54317 . + . ID=id-GGE_1141;Note=HMMPanther:PTHR23028:SF7~acyltransferase~HMMPanther:PTHR23028~family not named;gbkey=misc_feature;locus_tag=GGE_1141 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54011 54272 . + . ID=id-GGE_1141-2;Note=superfamily%3B label: COG1835 superfamily;gbkey=misc_feature;locus_tag=GGE_1141 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54071 54263 . - . ID=id-AFQR01000019.1:54071..54263;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54071 54083 . - . ID=id-AFQR01000019.1:54071..54083;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54080 54170 . - . ID=id-AFQR01000019.1:54080..54170;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 54430 55626 . + . ID=gene-GGE_1142;Name=GGE_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1142 GCA_000222085.2|AFQR01000019.1 Genbank CDS 54430 55626 . + 0 ID=cds-EGT81708.1;Parent=gene-GGE_1142;Dbxref=NCBI_GP:EGT81708.1;Name=EGT81708.1;Note=Hypothetical protein;gbkey=CDS;locus_tag=GGE_1142;product=Hypothetical protein;protein_id=EGT81708.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54430 54808 . + . ID=id-GGE_1142;Note=HMMPanther:PTHR23028:SF7~acyltransferase~HMMPanther:PTHR23028~family not named;gbkey=misc_feature;locus_tag=GGE_1142 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54430 54496 . + . ID=id-GGE_1142-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1142 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54460 54478 . + . ID=id-GGE_1142-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1142 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54526 54715 . + . ID=id-GGE_1142-4;Note=superfamily%3B label: COG1835 superfamily;gbkey=misc_feature;locus_tag=GGE_1142 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54466 54472 . - . ID=id-AFQR01000019.1:54466..54472;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54484 54835 . - . ID=id-AFQR01000019.1:54484..54835;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54490 54733 . - . ID=id-AFQR01000019.1:54490..54733;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54499 54631 . - . ID=id-AFQR01000019.1:54499..54631;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54499 54520 . - . ID=id-AFQR01000019.1:54499..54520;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 54970 55087 . - . ID=id-AFQR01000019.1:54970..55087;Note=BlastProDom:PD102758~q4qnf0_haei8_q4qnf0;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 55669 56811 . - . ID=gene-GGE_1143;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank CDS 55669 56811 . - 0 ID=cds-EGT81709.1;Parent=gene-GGE_1143;Dbxref=GeneID:1173094,InterPro:IPR002121,InterPro:IPR002562,InterPro:IPR006292,InterPro:IPR010997,InterPro:IPR012337,PFAM:PF00570,PFAM:PF01612,TIGRFAM:TIGR01388,NCBI_GP:EGT81709.1;Name=EGT81709.1;Ontology_term=GO:0044237,GO:0006139,GO:0008033,GO:0005737,GO:0005622,GO:0008408,GO:0003824,GO:0003676,GO:0000166,GO:0004540;gbkey=CDS;gene=rnd;go_component=cytoplasm|0005737||,intracellular|0005622||;go_function=3'-5' exonuclease activity|0008408||,catalytic activity|0003824||,nucleic acid binding|0003676||,nucleotide binding|0000166||,ribonuclease activity|0004540||;go_process=cellular metabolic process|0044237||,nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||,tRNA processing|0008033||;locus_tag=GGE_1143;product=Ribonuclease D;protein_id=EGT81709.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55696 56305 . - . ID=id-GGE_1143;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55699 56233 . - . ID=id-GGE_1143-2;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55702 56779 . - . ID=id-GGE_1143-3;Note=multi-dom%3B label: PRK10829;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55705 56170 . - . ID=id-GGE_1143-4;Dbxref=InterPro:IPR002562,PFAM:PF01612;Note=3_5_exonuc~3'-5' exonuclease;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55708 56773 . - . ID=id-GGE_1143-5;Dbxref=InterPro:IPR006292,TIGRFAM:TIGR01388;Note=rnd: ribonuclease d~ribonuclease d;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55708 56770 . - . ID=id-GGE_1143-6;Note=HMMPanther:PTHR12124:SF3~ribonuclease d~HMMPanther:PTHR12124~family not named;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55726 56203 . - . ID=id-GGE_1143-7;Note=specific~superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56713 56722 . - . ID=id-GGE_1143-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rnd;locus_tag=GGE_1143 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55705 56326 . + . ID=id-AFQR01000019.1:55705..56326;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55867 56341 . + . ID=id-AFQR01000019.1:55867..56341;Dbxref=InterPro:IPR002121,PFAM:PF00570;Note=hrdc~helicase/rnase d c-terminal%2C hrdc domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55879 56362 . + . ID=id-AFQR01000019.1:55879..56362;Note=superfamily%3B label: HRDC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55897 56584 . + . ID=id-AFQR01000019.1:55897..56584;Dbxref=InterPro:IPR010997;Note=superfamily:SSF47819~hrdc-like~hrdc-like;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55909 56329 . + . ID=id-AFQR01000019.1:55909..56329;Dbxref=InterPro:IPR002121;Note=ProfileScan:PS50967~hrdc~helicase/rnase d c-terminal%2C hrdc domain;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 55972 56281 . + . ID=id-AFQR01000019.1:55972..56281;Dbxref=InterPro:IPR010997;Note=superfamily:SSF47819~hrdc-like~hrdc-like;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56778 56787 . + . ID=id-AFQR01000019.1:56778..56787;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 56867 58555 . - . ID=gene-GGE_1144;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank CDS 56867 58555 . - 0 ID=cds-EGT81710.1;Parent=gene-GGE_1144;Dbxref=GeneID:1170729,InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,NCBI_GP:EGT81710.1;Name=EGT81710.1;Ontology_term=GO:0008152,GO:0003824;gbkey=CDS;gene=fadD;go_function=catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_1144;product=Long-chain-fatty-acid--CoA ligase;protein_id=EGT81710.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56867 58553 . - . ID=id-GGE_1144;Note=multi-dom%3B label: PRK08974;gbkey=misc_feature;gene=fadD;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56867 58541 . - . ID=id-GGE_1144-2;Note=HMMPanther:PTHR24096:SF44~subfamily not named~HMMPanther:PTHR24096~family not named;gbkey=misc_feature;gene=fadD;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56939 58472 . - . ID=id-GGE_1144-3;Note=superfamily:SSF56801~acetyl-coa synthetase-like;gbkey=misc_feature;gene=fadD;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 57017 58382 . - . ID=id-GGE_1144-4;Note=superfamily%3B label: LuxE superfamily;gbkey=misc_feature;gene=fadD;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 57017 58178 . - . ID=id-GGE_1144-5;Dbxref=InterPro:IPR000873,PFAM:PF00501;Note=amp-binding~amp-dependent synthetase/ligase;gbkey=misc_feature;gene=fadD;locus_tag=GGE_1144 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56903 57500 . + . ID=id-AFQR01000019.1:56903..57500;Dbxref=InterPro:IPR020845;Note=PatternScan:PS00455~amp_binding~amp-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56909 57371 . + . ID=id-AFQR01000019.1:56909..57371;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 56942 57452 . + . ID=id-AFQR01000019.1:56942..57452;Note=Gene3D:3.40.50.980;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 57098 58007 . + . ID=id-AFQR01000019.1:57098..58007;Note=Gene3D:2.30.38.10;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 57164 58238 . + . ID=id-AFQR01000019.1:57164..58238;Note=Gene3D:3.30.300.30;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 57347 57527 . + . ID=id-AFQR01000019.1:57347..57527;Note=Gene3D:3.40.50.980;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 58598 59149 . - . ID=gene-GGE_1145;Name=GGE_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1145 GCA_000222085.2|AFQR01000019.1 Genbank CDS 58598 59149 . - 0 ID=cds-EGT81711.1;Parent=gene-GGE_1145;Dbxref=GeneID:1175236,InterPro:IPR004658,PFAM:PF03843,TIGRFAM:TIGR00752,NCBI_GP:EGT81711.1;Name=EGT81711.1;Note=HI_0389;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_1145;product=putative lipoprotein;protein_id=EGT81711.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 58598 58655 . - . ID=id-GGE_1145;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1145 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 58604 59141 . - . ID=id-GGE_1145-2;Dbxref=InterPro:IPR004658,TIGRFAM:TIGR00752;Note=superfamily~slp: outer membrane lipoprotein%2C slp family~outer membrane lipoprotein slp%3B label: Slp superfamily;gbkey=misc_feature;locus_tag=GGE_1145 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 58646 59060 . - . ID=id-GGE_1145-3;Dbxref=InterPro:IPR004658,PFAM:PF03843;Note=slp~outer membrane lipoprotein slp;gbkey=misc_feature;locus_tag=GGE_1145 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 58646 59039 . + . ID=id-AFQR01000019.1:58646..59039;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59112 59121 . + . ID=id-AFQR01000019.1:59112..59121;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank gene 59174 59884 . - . ID=gene-GGE_1146;Name=GGE_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank CDS 59174 59884 . - 0 ID=cds-EGT81712.1;Parent=gene-GGE_1146;Dbxref=GeneID:1175235,InterPro:IPR000905,InterPro:IPR022496,PFAM:PF00814,TIGRFAM:TIGR03725,NCBI_GP:EGT81712.1;Name=EGT81712.1;Note=HI_0388;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||;go_process=proteolysis|0006508||;locus_tag=GGE_1146;product=Putative M22 peptidase;protein_id=EGT81712.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59174 59573 . - . ID=id-GGE_1146;Note=HMMPanther:PTHR11735:SF8~m22 peptidase homolog yeaz~HMMPanther:PTHR11735~family not named;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59189 59492 . - . ID=id-GGE_1146-2;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59192 59831 . - . ID=id-GGE_1146-3;Dbxref=InterPro:IPR022496,TIGRFAM:TIGR03725;Note=superfamily~bact_yeaz: universal bacterial protein yeaz~conserved hypothetical protein chp03725%2C yeaz%3B label: COG1214 superfamily;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59267 59660 . - . ID=id-GGE_1146-4;Dbxref=InterPro:IPR000905,PFAM:PF00814;Note=peptidase_m22~peptidase m22%2C glycoprotease;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59475 59484 . - . ID=id-GGE_1146-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59507 59510 . - . ID=id-GGE_1146-6;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;locus_tag=GGE_1146 GCA_000222085.2|AFQR01000019.1 Genbank gene 59897 61819 . - . ID=gene-GGE_1147;Name=GGE_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank CDS 59897 61819 . - 0 ID=cds-EGT81713.1;Parent=gene-GGE_1147;Dbxref=GeneID:1169345,InterPro:IPR001650,InterPro:IPR006935,InterPro:IPR014013,PFAM:PF04851,NCBI_GP:EGT81713.1;Name=EGT81713.1;Note=HI_0387;Ontology_term=GO:0005524,GO:0003677,GO:0004386,GO:0016817,GO:0016787,GO:0003676;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,helicase activity|0004386||,hydrolase activity acting on acid anhydrides|0016817||,hydrolase activity|0016787||,nucleic acid binding|0003676||;locus_tag=GGE_1147;product=Putative ATP-dependent helicase;protein_id=EGT81713.1;transl_table=11 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59909 61793 . - . ID=id-GGE_1147;Note=HMMPanther:PTHR11472:SF29~subfamily not named~HMMPanther:PTHR11472~family not named;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59930 61781 . - . ID=id-GGE_1147-2;Note=multi-dom%3B label: DinG;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59942 60569 . - . ID=id-GGE_1147-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59945 60686 . - . ID=id-GGE_1147-4;Dbxref=InterPro:IPR014013;Note=ProfileScan:PS51193~helicase_atp_bind_2~helicase%2C superfamily 1/2%2C atp-binding domain%2C ding/rad3-type;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59969 60578 . - . ID=id-GGE_1147-5;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 59984 61592 . - . ID=id-GGE_1147-6;Note=superfamily%3B label: csf4_Type-U superfamily;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 60026 61580 . - . ID=id-GGE_1147-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 60887 60896 . - . ID=id-GGE_1147-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1147 GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 60074 60443 . + . ID=id-AFQR01000019.1:60074..60443;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 60329 61280 . + . ID=id-AFQR01000019.1:60329..61280;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000019.1 Genbank sequence_feature 60428 61271 . + . ID=id-AFQR01000019.1:60428..61271;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature ##sequence-region AFQR01000018.1 1 87500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000018.1 Genbank region 1 87500 . + . ID=AFQR01000018.1:1..87500;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 509 518 . + . ID=id-AFQR01000018.1:509..518;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 549 872 . + . ID=gene-GGE_0987;Name=GGE_0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0987 GCA_000222085.2|AFQR01000018.1 Genbank CDS 549 872 . + 0 ID=cds-EGT81749.1;Parent=gene-GGE_0987;Dbxref=GeneID:301168975,NCBI_GP:EGT81749.1;Name=EGT81749.1;Note=CBW28572;gbkey=CDS;locus_tag=GGE_0987;product=Conserved subname: full;protein_id=EGT81749.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 609 609 . + . ID=id-GGE_0987;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0987 GCA_000222085.2|AFQR01000018.1 Genbank gene 869 1162 . + . ID=gene-GGE_0988;Name=GGE_0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0988 GCA_000222085.2|AFQR01000018.1 Genbank CDS 869 1162 . + 0 ID=cds-EGT81750.1;Parent=gene-GGE_0988;Dbxref=GeneID:68249854,NCBI_GP:EGT81750.1;Name=EGT81750.1;Note=YP_248966;gbkey=CDS;locus_tag=GGE_0988;product=Hypothetical protein;protein_id=EGT81750.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 1566 1892 . + . ID=gene-GGE_0989;Name=GGE_0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0989 GCA_000222085.2|AFQR01000018.1 Genbank CDS 1566 1892 . + 0 ID=cds-EGT81751.1;Parent=gene-GGE_0989;Dbxref=InterPro:IPR008840,PFAM:PF05565,NCBI_GP:EGT81751.1;Name=EGT81751.1;Note=Hypothetical siphovirus-like protein;gbkey=CDS;locus_tag=GGE_0989;product=putative siphovirus-like protein;protein_id=EGT81751.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 1566 1890 . + . ID=id-GGE_0989;Dbxref=InterPro:IPR008840,PFAM:PF05565;Note=superfamily~sipho_gp157~siphovirus gp157%3B label: Sipho_Gp157 superfamily;gbkey=misc_feature;locus_tag=GGE_0989 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 1722 1731 . + . ID=id-GGE_0989-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0989 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 1939 2122 . - . ID=id-AFQR01000018.1:1939..2122;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 2210 2477 . - . ID=id-AFQR01000018.1:2210..2477;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 2601 3236 . + . ID=gene-GGE_0990;Name=GGE_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0990 GCA_000222085.2|AFQR01000018.1 Genbank CDS 2601 3236 . + 0 ID=cds-EGT81752.1;Parent=gene-GGE_0990;Dbxref=GeneID:261492296,NCBI_GP:EGT81752.1;Name=EGT81752.1;Note=ZP_05988859~COK_0727;gbkey=CDS;locus_tag=GGE_0990;product=Hypothetical protein;protein_id=EGT81752.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 2637 3129 . - . ID=id-AFQR01000018.1:2637..3129;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 3248 3994 . + . ID=gene-GGE_0991;Name=GGE_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0991 GCA_000222085.2|AFQR01000018.1 Genbank CDS 3248 3994 . + 0 ID=cds-EGT81753.1;Parent=gene-GGE_0991;Dbxref=InterPro:IPR016177,NCBI_GP:EGT81753.1;Name=EGT81753.1;Note=Hypothetical dNA-binding%2C integrase-type;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_0991;product=putative dNA-binding%2C integrase-type;protein_id=EGT81753.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 3317 3431 . + . ID=id-GGE_0991;Dbxref=InterPro:IPR016177;Note=superfamily:SSF54171~dna-binding domain~dna-binding%2C integrase-type;gbkey=misc_feature;locus_tag=GGE_0991 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4197 4269 . + . ID=id-AFQR01000018.1:4197..4269;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4230 4335 . - . ID=id-AFQR01000018.1:4230..4335;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4248 4302 . - . ID=id-AFQR01000018.1:4248..4302;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 4360 4596 . + . ID=gene-GGE_0992;Name=GGE_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0992 GCA_000222085.2|AFQR01000018.1 Genbank CDS 4360 4596 . + 0 ID=cds-EGT81754.1;Parent=gene-GGE_0992;Dbxref=GeneID:145630455,NCBI_GP:EGT81754.1;Name=EGT81754.1;Note=ZP_01786236~CGSHi22421_07647;gbkey=CDS;locus_tag=GGE_0992;product=Hypothetical protein;protein_id=EGT81754.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4429 4489 . + . ID=id-GGE_0992;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0992 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4390 4567 . - . ID=id-AFQR01000018.1:4390..4567;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4553 4562 . - . ID=id-AFQR01000018.1:4553..4562;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 4593 4976 . + . ID=gene-GGE_0993;Name=GGE_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0993 GCA_000222085.2|AFQR01000018.1 Genbank CDS 4593 4976 . + 0 ID=cds-EGT81755.1;Parent=gene-GGE_0993;Dbxref=GeneID:319775698,NCBI_GP:EGT81755.1;Name=EGT81755.1;Note=YP_004138186~HICON_10400;gbkey=CDS;locus_tag=GGE_0993;product=Hypothetical protein;protein_id=EGT81755.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 4647 4884 . - . ID=id-AFQR01000018.1:4647..4884;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 5074 5304 . + . ID=gene-GGE_0994;Name=GGE_0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0994 GCA_000222085.2|AFQR01000018.1 Genbank CDS 5074 5304 . + 0 ID=cds-EGT81756.1;Parent=gene-GGE_0994;Dbxref=GeneID:145641577,NCBI_GP:EGT81756.1;Name=EGT81756.1;Note=ZP_01797154~CGSHiR3021_01462;gbkey=CDS;locus_tag=GGE_0994;product=Hypothetical protein;protein_id=EGT81756.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 5285 6376 . + . ID=gene-GGE_0995;Name=GGE_0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0995 GCA_000222085.2|AFQR01000018.1 Genbank CDS 5285 6376 . + 0 ID=cds-EGT81757.1;Parent=gene-GGE_0995;Dbxref=GeneID:145641578,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,PFAM:PF00589,NCBI_GP:EGT81757.1;Name=EGT81757.1;Note=ZP_01797155;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_0995;product=prophage integrase;protein_id=EGT81757.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 5285 6263 . + . ID=id-GGE_0995;Note=multi-dom%3B label: int;gbkey=misc_feature;locus_tag=GGE_0995 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 5762 5825 . + . ID=id-GGE_0995-2;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;locus_tag=GGE_0995 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 5762 5804 . + . ID=id-GGE_0995-3;Note=superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_0995 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 5771 5777 . + . ID=id-GGE_0995-4;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;locus_tag=GGE_0995 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 5714 5828 . - . ID=id-AFQR01000018.1:5714..5828;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6630 6648 . - . ID=id-AFQR01000018.1:6630..6648;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 6779 7552 . + . ID=gene-GGE_0996;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank CDS 6779 7552 . + 0 ID=cds-EGT81758.1;Parent=gene-GGE_0996;Dbxref=GeneID:1169718,InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,InterPro:IPR014710,InterPro:IPR018335,InterPro:IPR018490,PFAM:PF00027,PFAM:PF00325,NCBI_GP:EGT81758.1;Name=EGT81758.1;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_0996;product=Anaerobic regulatory protein;protein_id=EGT81758.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6821 7484 . + . ID=id-GGE_0996;Note=multi-dom%3B label: PRK11161;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6857 7205 . + . ID=id-GGE_0996-2;Dbxref=InterPro:IPR018490;Note=superfamily:SSF51206~camp-binding domain-like~cyclic nucleotide-binding-like;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6866 7190 . + . ID=id-GGE_0996-3;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6878 7031 . + . ID=id-GGE_0996-4;Dbxref=InterPro:IPR000595;Note=ProfileScan:PS50042~cnmp_binding_3~cyclic nucleotide-binding domain;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6890 7112 . + . ID=id-GGE_0996-5;Note=specific~superfamily%3B label: CAP_ED;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6944 7037 . + . ID=id-GGE_0996-6;Dbxref=InterPro:IPR000595,PFAM:PF00027;Note=cnmp_binding~cyclic nucleotide-binding domain;gbkey=misc_feature;gene=fnr;locus_tag=GGE_0996 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6827 7415 . - . ID=id-AFQR01000018.1:6827..7415;Dbxref=InterPro:IPR001808;Note=FPrintScan:PR00034~hthcrp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6830 7367 . - . ID=id-AFQR01000018.1:6830..7367;Dbxref=InterPro:IPR001808;Note=FPrintScan:PR00034~hthcrp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6851 7373 . - . ID=id-AFQR01000018.1:6851..7373;Dbxref=InterPro:IPR018335;Note=PatternScan:PS00042~hth_crp_1~transcription regulator%2C hth%2C crp-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6872 7367 . - . ID=id-AFQR01000018.1:6872..7367;Dbxref=InterPro:IPR001808,PFAM:PF00325;Note=crp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6986 7283 . - . ID=id-AFQR01000018.1:6986..7283;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 6989 7286 . - . ID=id-AFQR01000018.1:6989..7286;Note=specific~superfamily%3B label: HTH_CRP;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7001 7280 . - . ID=id-AFQR01000018.1:7001..7280;Dbxref=InterPro:IPR012318;Note=ProfileScan:PS51063~hth_crp_2~helix-turn-helix motif%2C crp-type;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7025 7283 . - . ID=id-AFQR01000018.1:7025..7283;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 7686 8615 . + . ID=gene-GGE_0997;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank CDS 7686 8615 . + 0 ID=cds-EGT81759.1;Parent=gene-GGE_0997;Dbxref=GeneID:2507515,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,NCBI_GP:EGT81759.1;Name=EGT81759.1;Ontology_term=GO:0006950;gbkey=CDS;gene=uspE;go_process=response to stress|0006950||;locus_tag=GGE_0997;product=Universal stress protein E;protein_id=EGT81759.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7686 8607 . + . ID=id-GGE_0997;Note=multi-dom%3B label: PRK11175;gbkey=misc_feature;gene=uspE;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7686 8136 . + . ID=id-GGE_0997-2;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=uspE;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7695 8145 . + . ID=id-GGE_0997-3;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=uspE;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7695 8127 . + . ID=id-GGE_0997-4;Dbxref=InterPro:IPR006016,PFAM:PF00582;Note=usp~uspa;gbkey=misc_feature;gene=uspE;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 7701 8118 . + . ID=id-GGE_0997-5;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=uspE;locus_tag=GGE_0997 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8115 8160 . - . ID=id-AFQR01000018.1:8115..8160;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8124 8157 . - . ID=id-AFQR01000018.1:8124..8157;Dbxref=InterPro:IPR006016,PFAM:PF00582;Note=usp~uspa;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8130 8154 . - . ID=id-AFQR01000018.1:8130..8154;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8142 8148 . - . ID=id-AFQR01000018.1:8142..8148;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 8813 9649 . + . ID=gene-GGE_0998;Name=GGE_0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0998 GCA_000222085.2|AFQR01000018.1 Genbank CDS 8813 9649 . + 0 ID=cds-EGT81760.1;Parent=gene-GGE_0998;Dbxref=GeneID:1175799,InterPro:IPR019613,PFAM:PF10670,NCBI_GP:EGT81760.1;Name=EGT81760.1;Note=HI_1427;gbkey=CDS;locus_tag=GGE_0998;product=putative nickel transport complex%2C NikM subunit%2C transmembrane;protein_id=EGT81760.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8813 9602 . + . ID=id-GGE_0998;Note=superfamily%3B label: CbiK superfamily;gbkey=misc_feature;locus_tag=GGE_0998 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8861 9497 . + . ID=id-GGE_0998-2;Note=multi-dom%3B label: NikM;gbkey=misc_feature;locus_tag=GGE_0998 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 8861 9494 . + . ID=id-GGE_0998-3;Dbxref=InterPro:IPR019613,PFAM:PF10670;Note=nikm~nickel transport complex%2C nikm subunit%2C transmembrane;gbkey=misc_feature;locus_tag=GGE_0998 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9654 9663 . + . ID=id-AFQR01000018.1:9654..9663;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9672 9681 . - . ID=id-AFQR01000018.1:9672..9681;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 9789 10547 . + . ID=gene-GGE_0999;Name=GGE_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank CDS 9789 10547 . + 0 ID=cds-EGT81761.1;Parent=gene-GGE_0999;Dbxref=GeneID:251792574,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,PFAM:PF00106,NCBI_GP:EGT81761.1;Name=EGT81761.1;Note=YP_003007300;Ontology_term=GO:0008152,GO:0055114,GO:0005488,GO:0003824,GO:0016491;gbkey=CDS;go_function=binding|0005488||,catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0999;product=NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg;protein_id=EGT81761.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9789 10458 . + . ID=id-GGE_0999;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9789 10452 . + . ID=id-GGE_0999-2;Note=multi-dom%3B label: FabG;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9795 10491 . + . ID=id-GGE_0999-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9798 10524 . + . ID=id-GGE_0999-4;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9798 10503 . + . ID=id-GGE_0999-5;Note=HMMPanther:PTHR24322:SF42~subfamily not named~HMMPanther:PTHR24322~family not named;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9798 10284 . + . ID=id-GGE_0999-6;Dbxref=InterPro:IPR002198,PFAM:PF00106;Note=adh_short~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9801 9843 . + . ID=id-GGE_0999-7;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature;locus_tag=GGE_0999 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9816 10176 . - . ID=id-AFQR01000018.1:9816..10176;Dbxref=InterPro:IPR002198;Note=FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9825 10026 . - . ID=id-AFQR01000018.1:9825..10026;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9825 10014 . - . ID=id-AFQR01000018.1:9825..10014;Dbxref=InterPro:IPR002198,InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase~FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9840 10158 . - . ID=id-AFQR01000018.1:9840..10158;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9843 10299 . - . ID=id-AFQR01000018.1:9843..10299;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9849 10236 . - . ID=id-AFQR01000018.1:9849..10236;Dbxref=InterPro:IPR002198,InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase~FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9852 10401 . - . ID=id-AFQR01000018.1:9852..10401;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 9876 10197 . - . ID=id-AFQR01000018.1:9876..10197;Dbxref=InterPro:IPR020904;Note=PatternScan:PS00061~adh_short~short-chain dehydrogenase/reductase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 10565 11761 . + . ID=gene-GGE_1000;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank CDS 10565 11761 . + 0 ID=cds-EGT81762.1;Parent=gene-GGE_1000;Dbxref=GeneID:81335536,InterPro:IPR001926,InterPro:IPR006653,InterPro:IPR006654,InterPro:IPR023026,PFAM:PF00291,TIGRFAM:TIGR00263,NCBI_GP:EGT81762.1;Name=EGT81762.1;Ontology_term=GO:0008152,GO:0006568,GO:0003824,GO:0030170,GO:0004834;gbkey=CDS;gene=trpB;go_function=catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,tryptophan synthase activity|0004834||;go_process=metabolic process|0008152||,tryptophan metabolic process|0006568||;locus_tag=GGE_1000;product=Tryptophan synthase beta chain;protein_id=EGT81762.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10565 11738 . + . ID=id-GGE_1000;Note=HMMPanther:PTHR10314:SF3~tryptophan synthase beta chain~HMMPanther:PTHR10314~ser/thr dehydratase%2C trp synthase;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10574 11735 . + . ID=id-GGE_1000-2;Dbxref=InterPro:IPR001926,InterPro:IPR023026;Note=HAMAP:MF_00133~trp_synth_beta~tryptophan synthase beta chain/beta chain-like~superfamily:SSF53686~tryptophan synthase beta subunit-like plp-dependent enzyme~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10589 11720 . + . ID=id-GGE_1000-3;Dbxref=InterPro:IPR006654,TIGRFAM:TIGR00263;Note=trpb: tryptophan synthase%2C beta subunit~tryptophan synthase%2C beta chain;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10595 11726 . + . ID=id-GGE_1000-4;Note=multi-dom%3B label: PLN02618;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10637 11660 . + . ID=id-GGE_1000-5;Note=specific~superfamily%3B label: Trp-synth-beta_II superfamily;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10730 11540 . + . ID=id-GGE_1000-6;Dbxref=InterPro:IPR001926,PFAM:PF00291;Note=palp~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10784 10946 . + . ID=id-GGE_1000-7;Note=Gene3D:3.40.50.1100;gbkey=misc_feature;gene=trpB;locus_tag=GGE_1000 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10610 10808 . - . ID=id-AFQR01000018.1:10610..10808;Dbxref=InterPro:IPR006653;Note=PatternScan:PS00168~trp_synthase_beta~tryptophan synthase%2C beta chain%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 10814 11477 . - . ID=id-AFQR01000018.1:10814..11477;Note=Gene3D:3.40.50.1100;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 11761 12570 . + . ID=gene-GGE_1001;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank CDS 11761 12570 . + 0 ID=cds-EGT81763.1;Parent=gene-GGE_1001;Dbxref=GeneID:166200545,InterPro:IPR002028,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR018204,PFAM:PF00290,TIGRFAM:TIGR00262,NCBI_GP:EGT81763.1;Name=EGT81763.1;Ontology_term=GO:0008152,GO:0006568,GO:0003824,GO:0004834;gbkey=CDS;gene=trpA;go_function=catalytic activity|0003824||,tryptophan synthase activity|0004834||;go_process=metabolic process|0008152||,tryptophan metabolic process|0006568||;locus_tag=GGE_1001;product=Tryptophan synthase alpha chain;protein_id=EGT81763.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11761 12565 . + . ID=id-GGE_1001;Dbxref=InterPro:IPR011060,InterPro:IPR013785;Note=superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel~Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11767 12217 . + . ID=id-GGE_1001-2;Note=HMMPanther:PTHR10314:SF28~tryptophan synthase alpha chain~HMMPanther:PTHR10314~ser/thr dehydratase%2C trp synthase;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11785 12544 . + . ID=id-GGE_1001-3;Dbxref=InterPro:IPR002028,PFAM:PF00290;Note=trp_synta~tryptophan synthase%2C alpha chain;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11785 12532 . + . ID=id-GGE_1001-4;Dbxref=InterPro:IPR002028,TIGRFAM:TIGR00262;Note=trpa: tryptophan synthase%2C alpha subunit~tryptophan synthase%2C alpha chain;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11803 12520 . + . ID=id-GGE_1001-5;Dbxref=InterPro:IPR002028;Note=HAMAP:MF_00131~trp_synth_alpha~tryptophan synthase%2C alpha chain;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11815 12508 . + . ID=id-GGE_1001-6;Note=multi-dom%3B label: PLN02591;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11815 12502 . + . ID=id-GGE_1001-7;Note=specific~superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 12018 12027 . + . ID=id-GGE_1001-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=trpA;locus_tag=GGE_1001 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11803 12433 . - . ID=id-AFQR01000018.1:11803..12433;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 11803 11905 . - . ID=id-AFQR01000018.1:11803..11905;Dbxref=InterPro:IPR018204;Note=PatternScan:PS00167~trp_synthase_alpha~tryptophan synthase%2C alpha chain%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 12811 14841 . + . ID=gene-GGE_1002;Name=GGE_1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1002 GCA_000222085.2|AFQR01000018.1 Genbank CDS 12811 14841 . + 0 ID=cds-EGT81764.1;Parent=gene-GGE_1002;Dbxref=GeneID:145641588,InterPro:IPR002296,InterPro:IPR003356,PFAM:PF02384,NCBI_GP:EGT81764.1;Name=EGT81764.1;Note=ZP_01797165;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676;gbkey=CDS;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_1002;product=N-6 DNA methylase;protein_id=EGT81764.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13390 14248 . + . ID=id-GGE_1002;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1002 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13789 13804 . + . ID=id-GGE_1002-2;Note=multi-dom%3B label: HsdM;gbkey=misc_feature;locus_tag=GGE_1002 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 12850 14233 . - . ID=id-AFQR01000018.1:12850..14233;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 12856 13963 . - . ID=id-AFQR01000018.1:12856..13963;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 12862 13891 . - . ID=id-AFQR01000018.1:12862..13891;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 12886 14272 . - . ID=id-AFQR01000018.1:12886..14272;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13162 14284 . - . ID=id-AFQR01000018.1:13162..14284;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13195 13960 . - . ID=id-AFQR01000018.1:13195..13960;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13258 13825 . - . ID=id-AFQR01000018.1:13258..13825;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 13456 13900 . - . ID=id-AFQR01000018.1:13456..13900;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 15033 15974 . + . ID=gene-GGE_1003;Name=GGE_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1003 GCA_000222085.2|AFQR01000018.1 Genbank CDS 15033 15974 . + 0 ID=cds-EGT81765.1;Parent=gene-GGE_1003;Dbxref=GeneID:145641589,InterPro:IPR000055,PFAM:PF01420,NCBI_GP:EGT81765.1;Name=EGT81765.1;Note=ZP_01797166;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA modification|0006304||;locus_tag=GGE_1003;product=phosphoribosylglycinamide formyltransferase;protein_id=EGT81765.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 15048 15366 . + . ID=id-GGE_1003;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature;locus_tag=GGE_1003 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 15051 15363 . + . ID=id-GGE_1003-2;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_1003 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 15459 15477 . + . ID=id-GGE_1003-3;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature;locus_tag=GGE_1003 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 15462 15465 . + . ID=id-GGE_1003-4;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_1003 GCA_000222085.2|AFQR01000018.1 Genbank gene 16068 16424 . - . ID=gene-GGE_1004;Name=GGE_1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1004 GCA_000222085.2|AFQR01000018.1 Genbank CDS 16068 16424 . - 0 ID=cds-EGT81766.1;Parent=gene-GGE_1004;Dbxref=GeneID:145636141,InterPro:IPR003787,PFAM:PF02635,NCBI_GP:EGT81766.1;Name=EGT81766.1;Note=ZP_01791811;gbkey=CDS;locus_tag=GGE_1004;product=phosphoribosylglycinamide formyltransferase;protein_id=EGT81766.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16068 16422 . - . ID=id-GGE_1004;Note=superfamily:SSF75169~dsrefh-like~Gene3D:3.40.1260.10;gbkey=misc_feature;locus_tag=GGE_1004 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16074 16419 . - . ID=id-GGE_1004-2;Note=superfamily%3B label: DrsE superfamily;gbkey=misc_feature;locus_tag=GGE_1004 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16077 16416 . - . ID=id-GGE_1004-3;Dbxref=InterPro:IPR003787,PFAM:PF02635;Note=drse~sulphur relay%2C dsre/f-like protein;gbkey=misc_feature;locus_tag=GGE_1004 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16317 16326 . - . ID=id-GGE_1004-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1004 GCA_000222085.2|AFQR01000018.1 Genbank gene 16432 17385 . - . ID=gene-GGE_1005;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank CDS 16432 17385 . - 0 ID=cds-EGT81767.1;Parent=gene-GGE_1005;Dbxref=GeneID:1174912,InterPro:IPR000534,InterPro:IPR012080,InterPro:IPR016040,PFAM:PF01118,PIR:PIRSF000148,NCBI_GP:EGT81767.1;Name=EGT81767.1;Ontology_term=GO:0008652,GO:0006520,GO:0008152,GO:0055114,GO:0005737,GO:0051287,GO:0050661,GO:0004073,GO:0005488,GO:0003824,GO:0016620;gbkey=CDS;gene=usg;go_component=cytoplasm|0005737||;go_function=NAD or NADH binding|0051287||,NADP or NADPH binding|0050661||,aspartate-semialdehyde dehydrogenase activity|0004073||,binding|0005488||,catalytic activity|0003824||,oxidoreductase activity acting on the aldehyde or oxo group of donors NAD or NADP as acceptor|0016620||;go_process=cellular amino acid biosynthetic process|0008652||,cellular amino acid metabolic process|0006520||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1005;product=USG-1 protein;protein_id=EGT81767.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16432 17383 . - . ID=id-GGE_1005;Dbxref=InterPro:IPR012080,PIR:PIRSF000148;Note=aspartate-semialdehyde dehydrogenase~aspartate-semialdehyde dehydrogenase;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16438 17380 . - . ID=id-GGE_1005-2;Note=multi-dom%3B label: PRK06901;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16447 16897 . - . ID=id-GGE_1005-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16483 16813 . - . ID=id-GGE_1005-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16489 16729 . - . ID=id-GGE_1005-5;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16498 16720 . - . ID=id-GGE_1005-6;Dbxref=InterPro:IPR000534,PFAM:PF01118;Note=semialdhyde_dh~semialdehyde dehydrogenase%2C nad-binding;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16822 16945 . - . ID=id-GGE_1005-7;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16864 16888 . - . ID=id-GGE_1005-8;Note=Gene3D:3.30.360.10;gbkey=misc_feature;gene=usg;locus_tag=GGE_1005 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 16673 16682 . + . ID=id-AFQR01000018.1:16673..16682;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 17444 17920 . + . ID=gene-GGE_1006;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank CDS 17444 17920 . + 0 ID=cds-EGT81768.1;Parent=gene-GGE_1006;Dbxref=GeneID:13124825,InterPro:IPR004369,InterPro:IPR007214,PFAM:PF04073,TIGRFAM:TIGR00011,NCBI_GP:EGT81768.1;Name=EGT81768.1;Ontology_term=GO:0006355;gbkey=CDS;gene=ybaK;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1006;product=Cys-tRNAPro/Cys-tRNACys deacylase ybaK;protein_id=EGT81768.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17444 17915 . + . ID=id-GGE_1006;Dbxref=InterPro:IPR007214;Note=Gene3D:3.90.960.10~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature;gene=ybaK;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17444 17909 . + . ID=id-GGE_1006-2;Note=specific~superfamily%3B label: YbaK_deacylase;gbkey=misc_feature;gene=ybaK;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17450 17909 . + . ID=id-GGE_1006-3;Dbxref=InterPro:IPR004369,TIGRFAM:TIGR00011;Note=ybak_ebsc: ybak/ebsc protein~prolyl-trna editing protein%2C ybak/ebsc;gbkey=misc_feature;gene=ybaK;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17450 17906 . + . ID=id-GGE_1006-4;Dbxref=InterPro:IPR007214;Note=superfamily:SSF55826~ybak/prors associated domain~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature;gene=ybaK;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17537 17792 . + . ID=id-GGE_1006-5;Dbxref=InterPro:IPR007214,PFAM:PF04073;Note=ybak~ybak/aminoacyl-trna synthetase-associated domain;gbkey=misc_feature;gene=ybaK;locus_tag=GGE_1006 GCA_000222085.2|AFQR01000018.1 Genbank gene 17966 19888 . - . ID=gene-GGE_1007;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank CDS 17966 19888 . - 0 ID=cds-EGT81769.1;Parent=gene-GGE_1007;Dbxref=GeneID:1169571,InterPro:IPR000606,InterPro:IPR006344,InterPro:IPR007807,PFAM:PF01443,PFAM:PF05127,TIGRFAM:TIGR01447,NCBI_GP:EGT81769.1;Name=EGT81769.1;Ontology_term=GO:0009338,GO:0008854,GO:0004386;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||;go_function=exodeoxyribonuclease V activity|0008854||,helicase activity|0004386||;locus_tag=GGE_1007;product=Exodeoxyribonuclease V alpha chain;protein_id=EGT81769.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17981 19862 . - . ID=id-GGE_1007;Dbxref=InterPro:IPR006344,TIGRFAM:TIGR01447;Note=recd: exodeoxyribonuclease v%2C alpha subunit~exodeoxyribonuclease v%2C alpha subunit;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 17981 19844 . - . ID=id-GGE_1007-2;Note=multi-dom%3B label: recD;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18332 18755 . - . ID=id-GGE_1007-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18350 19496 . - . ID=id-GGE_1007-4;Note=HMMPanther:PTHR10887:SF56~dna helicase-related~HMMPanther:PTHR10887~dna2/nam7 helicase family;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18578 18587 . - . ID=id-GGE_1007-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18884 18965 . - . ID=id-GGE_1007-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recD;locus_tag=GGE_1007 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18002 19094 . + . ID=id-AFQR01000018.1:18002..19094;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18023 18545 . + . ID=id-AFQR01000018.1:18023..18545;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18104 19670 . + . ID=id-AFQR01000018.1:18104..19670;Note=superfamily%3B label: UvrD-helicase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18119 19652 . + . ID=id-AFQR01000018.1:18119..19652;Dbxref=InterPro:IPR000606,PFAM:PF01443;Note=viral_helicase1~helicase domain%2C viral-like;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18131 19652 . + . ID=id-AFQR01000018.1:18131..19652;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18329 18539 . + . ID=id-AFQR01000018.1:18329..18539;Dbxref=InterPro:IPR007807,PFAM:PF05127;Note=duf699~domain of unknown function duf699%2C exodeoxyribonuclease v alpha chain;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 18560 18569 . + . ID=id-AFQR01000018.1:18560..18569;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19433 19442 . + . ID=id-AFQR01000018.1:19433..19442;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 19888 23547 . - . ID=gene-GGE_1008;Name=GGE_1008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank CDS 19888 23547 . - 0 ID=cds-EGT81770.1;Parent=gene-GGE_1008;Dbxref=GeneID:309973157,InterPro:IPR000212,InterPro:IPR004586,InterPro:IPR011335,InterPro:IPR011604,InterPro:IPR014016,InterPro:IPR014017,PFAM:PF00580,TIGRFAM:TIGR00609,NCBI_GP:EGT81770.1;Name=EGT81770.1;Note=ADO96358;Ontology_term=GO:0006281,GO:0005524,GO:0004003,GO:0003677,GO:0008854,GO:0016787,GO:0004518;gbkey=CDS;go_function=ATP binding|0005524||,ATP-dependent DNA helicase activity|0004003||,DNA binding|0003677||,exodeoxyribonuclease V activity|0008854||,hydrolase activity|0016787||,nuclease activity|0004518||;go_process=DNA repair|0006281||;locus_tag=GGE_1008;product=Exodeoxyribonuclease V%2C beta subunit;protein_id=EGT81770.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19888 21343 . - . ID=id-GGE_1008;Dbxref=InterPro:IPR014016;Note=ProfileScan:PS51198~uvrd_helicase_atp_bind~helicase%2C superfamily 1%2C uvrd-related;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19900 22105 . - . ID=id-GGE_1008-2;Dbxref=InterPro:IPR000212,PFAM:PF00580;Note=uvrd-helicase~dna helicase%2C uvrd/rep type;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19909 23527 . - . ID=id-GGE_1008-3;Dbxref=InterPro:IPR004586,TIGRFAM:TIGR00609;Note=superfamily~multi-dom~recb: exodeoxyribonuclease v%2C beta subunit~exodeoxyribonuclease v%2C beta subunit%3B label: recB;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19918 23440 . - . ID=id-GGE_1008-4;Dbxref=InterPro:IPR000212;Note=HMMPanther:PTHR11070~family not named~dna helicase%2C uvrd/rep type;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 19918 22432 . - . ID=id-GGE_1008-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20368 20545 . - . ID=id-GGE_1008-6;Note=Gene3D:1.10.3170.10;gbkey=misc_feature;locus_tag=GGE_1008 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20206 21025 . + . ID=id-AFQR01000018.1:20206..21025;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20314 21748 . + . ID=id-AFQR01000018.1:20314..21748;Note=Gene3D:1.10.486.10;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20320 22174 . + . ID=id-AFQR01000018.1:20320..22174;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20597 20606 . + . ID=id-AFQR01000018.1:20597..20606;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20731 21388 . + . ID=id-AFQR01000018.1:20731..21388;Dbxref=InterPro:IPR014017;Note=ProfileScan:PS51217~uvrd_helicase_cter~dna helicase%2C uvrd-like;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20746 22690 . + . ID=id-AFQR01000018.1:20746..22690;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 20773 22663 . + . ID=id-AFQR01000018.1:20773..22663;Dbxref=InterPro:IPR011604;Note=Gene3D:3.90.320.10~exonuclease%2C phage-type/recb;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 21578 21587 . + . ID=id-AFQR01000018.1:21578..21587;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 23642 23806 . - . ID=gene-GGE_1009;Name=GGE_1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank CDS 23642 23806 . - 0 ID=cds-EGT81771.1;Parent=gene-GGE_1009;Dbxref=InterPro:IPR006597,InterPro:IPR011990,PFAM:PF08238,NCBI_GP:EGT81771.1;Name=EGT81771.1;Note=Hypothetical sel1-like;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||;locus_tag=GGE_1009;product=putative sel1-like protein;protein_id=EGT81771.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23648 23792 . - . ID=id-GGE_1009;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23648 23786 . - . ID=id-GGE_1009-2;Note=superfamily:SSF81901~hcp-like;gbkey=misc_feature;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23648 23762 . - . ID=id-GGE_1009-3;Note=HMMPanther:PTHR11102~family not named;gbkey=misc_feature;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23663 23747 . - . ID=id-GGE_1009-4;Note=superfamily%3B label: Sel1 superfamily;gbkey=misc_feature;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23666 23744 . - . ID=id-GGE_1009-5;Dbxref=InterPro:IPR006597,PFAM:PF08238;Note=sel1~sel1-like;gbkey=misc_feature;locus_tag=GGE_1009 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 23819 23858 . - . ID=id-AFQR01000018.1:23819..23858;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 24307 24660 . - . ID=gene-GGE_1010;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank CDS 24307 24660 . - 0 ID=cds-EGT81772.1;Parent=gene-GGE_1010;Dbxref=InterPro:IPR005813,PFAM:PF00453,TIGRFAM:TIGR01032,NCBI_GP:EGT81772.1;Name=EGT81772.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0019843,GO:0003735;gbkey=CDS;gene=rplT;go_component=intracellular|0005622||,ribosome|0005840||;go_function=rRNA binding|0019843||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1010;product=50S ribosomal protein L20;protein_id=EGT81772.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24307 24658 . - . ID=id-GGE_1010;Dbxref=InterPro:IPR005813;Note=HMMPanther:PTHR10986~39s ribosomal protein l20~ribosomal protein l20;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24307 24649 . - . ID=id-GGE_1010-2;Dbxref=InterPro:IPR005813,TIGRFAM:TIGR01032;Note=rplt_bact: ribosomal protein l20~ribosomal protein l20;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24313 24649 . - . ID=id-GGE_1010-3;Dbxref=InterPro:IPR005813;Note=superfamily~HAMAP:MF_00382~ribosomal_l20~ribosomal protein l20%3B label: Ribosomal_L20 superfamily;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24313 24631 . - . ID=id-GGE_1010-4;Dbxref=InterPro:IPR005813,PFAM:PF00453;Note=ribosomal_l20~ribosomal protein l20;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24343 24397 . - . ID=id-GGE_1010-5;Dbxref=InterPro:IPR005813;Note=FPrintScan:PR00062~ribosomall20~ribosomal protein l20;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24370 24463 . - . ID=id-GGE_1010-6;Note=BlastProDom:PD002389~rl20_vibch_p0a479;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24472 24496 . - . ID=id-GGE_1010-7;Note=Gene3D:1.10.1900.20;gbkey=misc_feature;gene=rplT;locus_tag=GGE_1010 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24343 24451 . + . ID=id-AFQR01000018.1:24343..24451;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24358 24469 . + . ID=id-AFQR01000018.1:24358..24469;Dbxref=InterPro:IPR005813;Note=PatternScan:PS00937~ribosomal_l20~ribosomal protein l20;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24388 24532 . + . ID=id-AFQR01000018.1:24388..24532;Dbxref=InterPro:IPR005813;Note=FPrintScan:PR00062~ribosomall20~ribosomal protein l20;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24397 24433 . + . ID=id-AFQR01000018.1:24397..24433;Dbxref=InterPro:IPR005813;Note=FPrintScan:PR00062~ribosomall20~ribosomal protein l20;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24478 24490 . + . ID=id-AFQR01000018.1:24478..24490;Note=superfamily:SSF74731~ribosomal protein l20;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 24726 24995 . - . ID=gene-GGE_1011;Name=GGE_1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank CDS 24726 24995 . - 0 ID=cds-EGT81773.1;Parent=gene-GGE_1011;Dbxref=GeneID:145630794,InterPro:IPR001706,InterPro:IPR018265,InterPro:IPR021137,PFAM:PF01632,TIGRFAM:TIGR00001,NCBI_GP:EGT81773.1;Name=EGT81773.1;Note=ZP_01786572;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_1011;product=50S ribosomal protein L35;protein_id=EGT81773.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24801 24921 . - . ID=id-GGE_1011;Note=superfamily%3B label: Ribosomal_L35p superfamily;gbkey=misc_feature;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24801 24918 . - . ID=id-GGE_1011-2;Dbxref=InterPro:IPR001706;Note=HAMAP:MF_00514~ribosomal_l35~ribosomal protein l35%2C non-mitochondrial;gbkey=misc_feature;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24804 24918 . - . ID=id-GGE_1011-3;Note=superfamily:SSF143034~l35p-like;gbkey=misc_feature;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24804 24915 . - . ID=id-GGE_1011-4;Dbxref=InterPro:IPR001706,TIGRFAM:TIGR00001;Note=rpmi_bact: ribosomal protein l35~ribosomal protein l35%2C non-mitochondrial;gbkey=misc_feature;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24804 24909 . - . ID=id-GGE_1011-5;Dbxref=InterPro:IPR021137,PFAM:PF01632;Note=ribosomal_l35p~ribosomal protein l35;gbkey=misc_feature;locus_tag=GGE_1011 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24771 24861 . + . ID=id-AFQR01000018.1:24771..24861;Dbxref=InterPro:IPR001706;Note=FPrintScan:PR00064~ribosomall35~ribosomal protein l35%2C non-mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24780 24807 . + . ID=id-AFQR01000018.1:24780..24807;Dbxref=InterPro:IPR001706;Note=FPrintScan:PR00064~ribosomall35~ribosomal protein l35%2C non-mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24783 24906 . + . ID=id-AFQR01000018.1:24783..24906;Dbxref=InterPro:IPR001706;Note=FPrintScan:PR00064~ribosomall35~ribosomal protein l35%2C non-mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24786 24882 . + . ID=id-AFQR01000018.1:24786..24882;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 24807 24813 . + . ID=id-AFQR01000018.1:24807..24813;Dbxref=InterPro:IPR018265;Note=PatternScan:PS00936~ribosomal_l35~ribosomal protein l35%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 25134 25541 . - . ID=gene-GGE_1012;Name=GGE_1012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank CDS 25134 25541 . - 0 ID=cds-EGT81774.1;Parent=gene-GGE_1012;Dbxref=InterPro:IPR001288,InterPro:IPR019813,InterPro:IPR019814,InterPro:IPR019815,PFAM:PF00707,PFAM:PF05198,TIGRFAM:TIGR00168,NCBI_GP:EGT81774.1;Name=EGT81774.1;Note=Hypothetical translation initiation factor 3-like protein;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;go_function=translation initiation factor activity|0003743||;go_process=translational initiation|0006413||;locus_tag=GGE_1012;product=putative translation initiation factor 3-like protein;protein_id=EGT81774.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25134 25539 . - . ID=id-GGE_1012;Dbxref=InterPro:IPR001288,TIGRFAM:TIGR00168;Note=infc: translation initiation factor if-3~translation initiation factor 3~HMMPanther:PTHR10938~translation initiation factor if-3~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25134 25260 . - . ID=id-GGE_1012-2;Dbxref=InterPro:IPR019814;Note=superfamily:SSF54364~translation initiation factor if3 domain~translation initiation factor 3~Gene3D:3.10.20.80~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25134 25257 . - . ID=id-GGE_1012-3;Dbxref=InterPro:IPR019814,PFAM:PF05198;Note=if3_n~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25134 25227 . - . ID=id-GGE_1012-4;Note=superfamily%3B label: IF3_N superfamily;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25263 25413 . - . ID=id-GGE_1012-5;Dbxref=InterPro:IPR019815;Note=Gene3D:3.30.110.10~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25272 25404 . - . ID=id-GGE_1012-6;Dbxref=InterPro:IPR019815;Note=superfamily:SSF55200~translation initiation factor if3 domain~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25275 25398 . - . ID=id-GGE_1012-7;Dbxref=InterPro:IPR019815,PFAM:PF00707;Note=if3_c~translation initiation factor 3;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25296 25374 . - . ID=id-GGE_1012-8;Note=superfamily%3B label: IF3_C superfamily;gbkey=misc_feature;locus_tag=GGE_1012 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25176 25200 . + . ID=id-AFQR01000018.1:25176..25200;Dbxref=InterPro:IPR019813;Note=PatternScan:PS00938~if3~translation initiation factor 3%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25200 25230 . + . ID=id-AFQR01000018.1:25200..25230;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25809 25890 . - . ID=id-AFQR01000018.1:25809..25890;Note=superfamily%3B label: Aldose_epim superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 25896 26621 . - . ID=gene-GGE_1013;Name=GGE_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank CDS 25896 26621 . - 0 ID=cds-EGT81775.1;Parent=gene-GGE_1013;Dbxref=InterPro:IPR008183,InterPro:IPR011013,InterPro:IPR014718,PFAM:PF01263,NCBI_GP:EGT81775.1;Name=EGT81775.1;Note=HI_1317;Ontology_term=GO:0005975,GO:0030246,GO:0003824,GO:0016853;gbkey=CDS;go_function=carbohydrate binding|0030246||,catalytic activity|0003824||,isomerase activity|0016853||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_1013;product=Putative glucose-6-phosphate 1-epimerase;protein_id=EGT81775.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25896 26619 . - . ID=id-GGE_1013;Dbxref=InterPro:IPR011013;Note=superfamily:SSF74650~galactose mutarotase-like~glycoside hydrolase-type carbohydrate-binding;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25902 25923 . - . ID=id-GGE_1013-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25908 26607 . - . ID=id-GGE_1013-3;Dbxref=InterPro:IPR014718;Note=Gene3D:2.70.98.10~glycoside hydrolase-type carbohydrate-binding%2C subgroup;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25929 26586 . - . ID=id-GGE_1013-4;Note=HMMPanther:PTHR11122:SF9~subfamily not named~HMMPanther:PTHR11122~family not named;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25965 26550 . - . ID=id-GGE_1013-5;Note=specific~superfamily%3B label: Aldose_epim superfamily;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 25968 26523 . - . ID=id-GGE_1013-6;Dbxref=InterPro:IPR008183,PFAM:PF01263;Note=aldose_epim~aldose 1-epimerase;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26293 26302 . - . ID=id-GGE_1013-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1013 GCA_000222085.2|AFQR01000018.1 Genbank gene 26706 26999 . - . ID=gene-GGE_1014;Name=GGE_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank CDS 26706 26999 . - 0 ID=cds-EGT81776.1;Parent=gene-GGE_1014;Dbxref=InterPro:IPR017850,NCBI_GP:EGT81776.1;Name=EGT81776.1;Note=Hypothetical arylsulfatase;Ontology_term=GO:0008152,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_1014;product=putative arylsulfatase;protein_id=EGT81776.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26706 26961 . - . ID=id-GGE_1014;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26706 26952 . - . ID=id-GGE_1014-2;Note=multi-dom%3B label: AslA;gbkey=misc_feature;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26775 26898 . - . ID=id-GGE_1014-3;Note=Gene3D:3.30.1120.10;gbkey=misc_feature;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26781 26892 . - . ID=id-GGE_1014-4;Note=HMMPanther:PTHR10342~arylsulfatase;gbkey=misc_feature;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 26838 26847 . - . ID=id-GGE_1014-5;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1014 GCA_000222085.2|AFQR01000018.1 Genbank gene 27050 28150 . - . ID=gene-GGE_1015;Name=GGE_1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1015 GCA_000222085.2|AFQR01000018.1 Genbank CDS 27050 28150 . - 0 ID=cds-EGT81777.1;Parent=gene-GGE_1015;Dbxref=InterPro:IPR000917,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884,NCBI_GP:EGT81777.1;Name=EGT81777.1;Note=Hypothetical sulfatase;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_1015;product=putative sulfatase;protein_id=EGT81777.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 27050 28145 . - . ID=id-GGE_1015;Note=HMMPanther:PTHR10342:SF35~iduronate 2-sulfatase~HMMPanther:PTHR10342~arylsulfatase;gbkey=misc_feature;locus_tag=GGE_1015 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 27056 28142 . - . ID=id-GGE_1015-2;Dbxref=InterPro:IPR000917,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884;Note=superfamily~superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain~Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha~sulfatase~sulfatase%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_1015 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 27083 27323 . + . ID=id-AFQR01000018.1:27083..27323;Dbxref=InterPro:IPR000917;Note=PatternScan:PS00149~sulfatase_2~sulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 27089 27191 . + . ID=id-AFQR01000018.1:27089..27191;Dbxref=InterPro:IPR000917;Note=PatternScan:PS00523~sulfatase_1~sulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 27236 27245 . + . ID=id-AFQR01000018.1:27236..27245;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 28150 28983 . - . ID=gene-GGE_1016;Name=GGE_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank CDS 28150 28983 . - 0 ID=cds-EGT81778.1;Parent=gene-GGE_1016;Dbxref=InterPro:IPR001734,PFAM:PF00474,NCBI_GP:EGT81778.1;Name=EGT81778.1;Note=Hypothetical sodium/solute symporter;Ontology_term=GO:0055085,GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1016;product=putative sodium/solute symporter;protein_id=EGT81778.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28150 28675 . - . ID=id-GGE_1016;Dbxref=InterPro:IPR001734;Note=ProfileScan:PS50283~na_solut_symp_3~sodium/solute symporter;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28150 28210 . - . ID=id-GGE_1016-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28165 28216 . - . ID=id-GGE_1016-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28213 28912 . - . ID=id-GGE_1016-4;Note=superfamily%3B label: SSF superfamily;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28219 28537 . - . ID=id-GGE_1016-5;Dbxref=InterPro:IPR001734,PFAM:PF00474;Note=ssf~sodium/solute symporter;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28258 28486 . - . ID=id-GGE_1016-6;Dbxref=InterPro:IPR001734;Note=HMMPanther:PTHR11819:SF55~sodium/myo-inositol cotransporter (na(+)/myo-inositol cotransporter)(solute carr~HMMPanther:PTHR11819~family not named~sodium/solute symporter;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28718 28727 . - . ID=id-GGE_1016-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1016 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28204 28621 . + . ID=id-AFQR01000018.1:28204..28621;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28204 28534 . + . ID=id-AFQR01000018.1:28204..28534;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28210 28906 . + . ID=id-AFQR01000018.1:28210..28906;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28219 28810 . + . ID=id-AFQR01000018.1:28219..28810;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28219 28684 . + . ID=id-AFQR01000018.1:28219..28684;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28219 28456 . + . ID=id-AFQR01000018.1:28219..28456;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 28219 28288 . + . ID=id-AFQR01000018.1:28219..28288;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 29053 29826 . - . ID=gene-GGE_1017;Name=GGE_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1017 GCA_000222085.2|AFQR01000018.1 Genbank CDS 29053 29826 . - 0 ID=cds-EGT81779.1;Parent=gene-GGE_1017;Dbxref=InterPro:IPR001734,InterPro:IPR018212,PFAM:PF00474,NCBI_GP:EGT81779.1;Name=EGT81779.1;Note=Hypothetical sodium/solute symporter;Ontology_term=GO:0055085,GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_1017;product=putative sodium/solute symporter;protein_id=EGT81779.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29053 29824 . - . ID=id-GGE_1017;Dbxref=InterPro:IPR001734;Note=superfamily~ProfileScan:PS50283~na_solut_symp_3~sodium/solute symporter%3B label: SSF superfamily;gbkey=misc_feature;locus_tag=GGE_1017 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29065 29107 . - . ID=id-GGE_1017-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1017 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29077 29803 . - . ID=id-GGE_1017-3;Dbxref=InterPro:IPR001734;Note=HMMPanther:PTHR11819:SF7~sodium/glucose cotransporter~HMMPanther:PTHR11819~family not named~sodium/solute symporter;gbkey=misc_feature;locus_tag=GGE_1017 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29155 29635 . - . ID=id-GGE_1017-4;Dbxref=InterPro:IPR001734,PFAM:PF00474;Note=ssf~sodium/solute symporter;gbkey=misc_feature;locus_tag=GGE_1017 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29101 29551 . + . ID=id-AFQR01000018.1:29101..29551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29113 29632 . + . ID=id-AFQR01000018.1:29113..29632;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29122 29527 . + . ID=id-AFQR01000018.1:29122..29527;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29122 29416 . + . ID=id-AFQR01000018.1:29122..29416;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29122 29266 . + . ID=id-AFQR01000018.1:29122..29266;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29122 29155 . + . ID=id-AFQR01000018.1:29122..29155;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29131 29530 . + . ID=id-AFQR01000018.1:29131..29530;Dbxref=InterPro:IPR018212;Note=PatternScan:PS00456~na_solut_symp_1~sodium/solute symporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 29414 29423 . + . ID=id-AFQR01000018.1:29414..29423;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30019 30028 . - . ID=id-AFQR01000018.1:30019..30028;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 30032 32083 . - . ID=gene-GGE_1018;Name=GGE_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1018 GCA_000222085.2|AFQR01000018.1 Genbank CDS 30032 32083 . - 0 ID=cds-EGT81780.1;Parent=gene-GGE_1018;Dbxref=GeneID:301155874,InterPro:IPR003959,PFAM:PF00004,NCBI_GP:EGT81780.1;Name=EGT81780.1;Note=CBW15343;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;locus_tag=GGE_1018;product=Hypothetical protein;protein_id=EGT81780.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30644 30737 . - . ID=id-GGE_1018;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1018 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30882 30891 . - . ID=id-GGE_1018-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1018 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30071 30497 . + . ID=id-AFQR01000018.1:30071..30497;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30374 31475 . + . ID=id-AFQR01000018.1:30374..31475;Note=HMMPanther:PTHR23077:SF33~subfamily not named~HMMPanther:PTHR23077~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30401 31466 . + . ID=id-AFQR01000018.1:30401..31466;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30404 30770 . + . ID=id-AFQR01000018.1:30404..30770;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30413 31454 . + . ID=id-AFQR01000018.1:30413..31454;Note=multi-dom%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30422 30758 . + . ID=id-AFQR01000018.1:30422..30758;Note=multi-dom%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30422 30752 . + . ID=id-AFQR01000018.1:30422..30752;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30449 31421 . + . ID=id-AFQR01000018.1:30449..31421;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30461 31445 . + . ID=id-AFQR01000018.1:30461..31445;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30539 30677 . + . ID=id-AFQR01000018.1:30539..30677;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 30599 31388 . + . ID=id-AFQR01000018.1:30599..31388;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 32162 33388 . - . ID=gene-GGE_1019;Name=GGE_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1019 GCA_000222085.2|AFQR01000018.1 Genbank CDS 32162 33388 . - 0 ID=cds-EGT81781.1;Parent=gene-GGE_1019;Dbxref=GeneID:301170062,NCBI_GP:EGT81781.1;Name=EGT81781.1;Note=CBW29666;gbkey=CDS;locus_tag=GGE_1019;product=Hypothetical protein;protein_id=EGT81781.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 33407 34072 . - . ID=gene-GGE_1020;Name=GGE_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank CDS 33407 34072 . - 0 ID=cds-EGT81782.1;Parent=gene-GGE_1020;Dbxref=GeneID:301170061,InterPro:IPR001932,InterPro:IPR010822,InterPro:IPR015655,PFAM:PF07228,NCBI_GP:EGT81782.1;Name=EGT81782.1;Note=CBW29665;Ontology_term=GO:0003824,GO:0004721;gbkey=CDS;go_function=catalytic activity|0003824||,phosphoprotein phosphatase activity|0004721||;locus_tag=GGE_1020;product=putative sporulation stage II protein E;protein_id=EGT81782.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 33419 34061 . - . ID=id-GGE_1020;Dbxref=InterPro:IPR001932;Note=superfamily:SSF81606~pp2c-like~protein phosphatase 2c-like;gbkey=misc_feature;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 33443 34037 . - . ID=id-GGE_1020-2;Note=superfamily%3B label: PP2Cc superfamily;gbkey=misc_feature;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 33467 34007 . - . ID=id-GGE_1020-3;Dbxref=InterPro:IPR001932;Note=Gene3D:3.60.40.10~protein phosphatase 2c-like;gbkey=misc_feature;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 33467 33875 . - . ID=id-GGE_1020-4;Dbxref=InterPro:IPR015655;Note=HMMPanther:PTHR13832:SF193~putative uncharacterized protein~HMMPanther:PTHR13832~family not named~protein phosphatase 2c;gbkey=misc_feature;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 33515 33848 . - . ID=id-GGE_1020-5;Dbxref=InterPro:IPR010822,PFAM:PF07228;Note=spoiie~sporulation stage ii%2C protein e c-terminal;gbkey=misc_feature;locus_tag=GGE_1020 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 34015 34024 . + . ID=id-AFQR01000018.1:34015..34024;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 34172 34591 . - . ID=gene-GGE_1021;Name=GGE_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1021 GCA_000222085.2|AFQR01000018.1 Genbank CDS 34172 34591 . - 0 ID=cds-EGT81783.1;Parent=gene-GGE_1021;Dbxref=NCBI_GP:EGT81783.1;Name=EGT81783.1;Note=Hypothetical dHS-like NAD/FAD-binding domain;gbkey=CDS;locus_tag=GGE_1021;product=putative dHS-like NAD/FAD-binding domain-containing protein;protein_id=EGT81783.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 34220 34532 . - . ID=id-GGE_1021;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain;gbkey=misc_feature;locus_tag=GGE_1021 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 34404 34413 . - . ID=id-GGE_1021-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1021 GCA_000222085.2|AFQR01000018.1 Genbank gene 34651 35439 . - . ID=gene-GGE_1022;Name=GGE_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1022 GCA_000222085.2|AFQR01000018.1 Genbank CDS 34651 35439 . - 0 ID=cds-EGT81784.1;Parent=gene-GGE_1022;Dbxref=GeneID:229844530,NCBI_GP:EGT81784.1;Name=EGT81784.1;Note=ZP_04464670;gbkey=CDS;locus_tag=GGE_1022;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT81784.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 34651 35434 . - . ID=id-GGE_1022;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_1022 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 34843 35104 . + . ID=id-AFQR01000018.1:34843..35104;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 35639 35651 . + . ID=id-AFQR01000018.1:35639..35651;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 36080 36421 . - . ID=gene-GGE_1023;Name=GGE_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1023 GCA_000222085.2|AFQR01000018.1 Genbank CDS 36080 36421 . - 0 ID=cds-EGT81785.1;Parent=gene-GGE_1023;Dbxref=GeneID:225076673,NCBI_GP:EGT81785.1;Name=EGT81785.1;Note=ZP_03719872~NEIFLAOT_01724;gbkey=CDS;locus_tag=GGE_1023;product=Hypothetical protein;protein_id=EGT81785.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 36108 36117 . - . ID=id-GGE_1023;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1023 GCA_000222085.2|AFQR01000018.1 Genbank gene 36402 36902 . - . ID=gene-GGE_1024;Name=GGE_1024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1024 GCA_000222085.2|AFQR01000018.1 Genbank CDS 36402 36902 . - 0 ID=cds-EGT81786.1;Parent=gene-GGE_1024;Dbxref=GeneID:145639959,NCBI_GP:EGT81786.1;Name=EGT81786.1;Note=ZP_01795558~CGSHiII_07033;gbkey=CDS;locus_tag=GGE_1024;product=Hypothetical protein;protein_id=EGT81786.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 36471 36735 . - . ID=id-GGE_1024;Note=Gene3D:2.30.30.330;gbkey=misc_feature;locus_tag=GGE_1024 GCA_000222085.2|AFQR01000018.1 Genbank gene 36895 37518 . - . ID=gene-GGE_1025;Name=GGE_1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1025 GCA_000222085.2|AFQR01000018.1 Genbank CDS 36895 37518 . - 0 ID=cds-EGT81787.1;Parent=gene-GGE_1025;Dbxref=GeneID:229844526,NCBI_GP:EGT81787.1;Name=EGT81787.1;Note=ZP_04464666~CGSHi6P18H1_09430;gbkey=CDS;locus_tag=GGE_1025;product=Hypothetical protein;protein_id=EGT81787.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 36961 37444 . + . ID=id-AFQR01000018.1:36961..37444;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 37569 37863 . + . ID=id-AFQR01000018.1:37569..37863;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 38392 38976 . - . ID=gene-GGE_1026;Name=GGE_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1026 GCA_000222085.2|AFQR01000018.1 Genbank CDS 38392 38976 . - 0 ID=cds-EGT81788.1;Parent=gene-GGE_1026;Dbxref=GeneID:145633905,InterPro:IPR018755,PFAM:PF10076,NCBI_GP:EGT81788.1;Name=EGT81788.1;Note=ZP_01789625~CGSHi3655_00015;gbkey=CDS;locus_tag=GGE_1026;product=Hypothetical protein;protein_id=EGT81788.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 38404 38962 . - . ID=id-GGE_1026;Note=superfamily%3B label: DUF2313 superfamily;gbkey=misc_feature;locus_tag=GGE_1026 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 38428 38935 . - . ID=id-GGE_1026-2;Dbxref=InterPro:IPR018755,PFAM:PF10076;Note=duf2313~protein of unknown function duf2313%2C mu protein gp48;gbkey=misc_feature;locus_tag=GGE_1026 GCA_000222085.2|AFQR01000018.1 Genbank gene 38964 40034 . - . ID=gene-GGE_1027;Name=GGE_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1027 GCA_000222085.2|AFQR01000018.1 Genbank CDS 38964 40034 . - 0 ID=cds-EGT81789.1;Parent=gene-GGE_1027;Dbxref=GeneID:145633906,InterPro:IPR006949,PFAM:PF04865,NCBI_GP:EGT81789.1;Name=EGT81789.1;Note=ZP_01789626;gbkey=CDS;locus_tag=GGE_1027;product=putative baseplate assembly protein J-like%2C predicted;protein_id=EGT81789.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 38970 40023 . - . ID=id-GGE_1027;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_1027 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 39150 39159 . - . ID=id-GGE_1027-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1027 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 39156 39732 . - . ID=id-GGE_1027-3;Dbxref=InterPro:IPR006949,PFAM:PF04865;Note=baseplate_j~baseplate assembly protein j-like%2C predicted;gbkey=misc_feature;locus_tag=GGE_1027 GCA_000222085.2|AFQR01000018.1 Genbank gene 40034 40453 . - . ID=gene-GGE_1028;Name=GGE_1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1028 GCA_000222085.2|AFQR01000018.1 Genbank CDS 40034 40453 . - 0 ID=cds-EGT81790.1;Parent=gene-GGE_1028;Dbxref=GeneID:145633907,InterPro:IPR010877,PFAM:PF07409,NCBI_GP:EGT81790.1;Name=EGT81790.1;Note=ZP_01789627;gbkey=CDS;locus_tag=GGE_1028;product=putative phage GP46;protein_id=EGT81790.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40076 40082 . - . ID=id-GGE_1028;Note=seg;gbkey=misc_feature;locus_tag=GGE_1028 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40112 40370 . - . ID=id-GGE_1028-2;Dbxref=InterPro:IPR010877,PFAM:PF07409;Note=gp46~phage gp46;gbkey=misc_feature;locus_tag=GGE_1028 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40124 40358 . - . ID=id-GGE_1028-3;Note=superfamily%3B label: GP46 superfamily;gbkey=misc_feature;locus_tag=GGE_1028 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40067 40373 . + . ID=id-AFQR01000018.1:40067..40373;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 40459 40983 . - . ID=gene-GGE_1029;Name=GGE_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1029 GCA_000222085.2|AFQR01000018.1 Genbank CDS 40459 40983 . - 0 ID=cds-EGT81791.1;Parent=gene-GGE_1029;Dbxref=GeneID:145633908,InterPro:IPR010688,InterPro:IPR013046,InterPro:IPR014462,PFAM:PF06890,PIR:PIRSF012337,TIGRFAM:TIGR01644,NCBI_GP:EGT81791.1;Name=EGT81791.1;Note=ZP_01789628;gbkey=CDS;locus_tag=GGE_1029;product=putative bacteriophage Mu Gp45;protein_id=EGT81791.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40459 40981 . - . ID=id-GGE_1029;Dbxref=InterPro:IPR014462,PIR:PIRSF012337;Note=phage-associated protein gp45~mu-like prophage protein gp45;gbkey=misc_feature;locus_tag=GGE_1029 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40492 40951 . - . ID=id-GGE_1029-2;Dbxref=InterPro:IPR013046,TIGRFAM:TIGR01644;Note=phage_p2_v: phage baseplate assembly prote~phage-related baseplate assembly protein v;gbkey=misc_feature;locus_tag=GGE_1029 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40519 40924 . - . ID=id-GGE_1029-3;Note=superfamily%3B label: Phage_base_V superfamily;gbkey=misc_feature;locus_tag=GGE_1029 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40519 40921 . - . ID=id-GGE_1029-4;Dbxref=InterPro:IPR010688,PFAM:PF06890;Note=phage_mu_gp45~bacteriophage mu gp45;gbkey=misc_feature;locus_tag=GGE_1029 GCA_000222085.2|AFQR01000018.1 Genbank gene 40987 41424 . - . ID=gene-GGE_1030;Name=GGE_1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1030 GCA_000222085.2|AFQR01000018.1 Genbank CDS 40987 41424 . - 0 ID=cds-EGT81792.1;Parent=gene-GGE_1030;Dbxref=GeneID:145633910,InterPro:IPR010277,PFAM:PF05954,NCBI_GP:EGT81792.1;Name=EGT81792.1;Note=ZP_01789630;gbkey=CDS;locus_tag=GGE_1030;product=putative tail protein;protein_id=EGT81792.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40993 41338 . - . ID=id-GGE_1030;Note=superfamily%3B label: COG4379 superfamily;gbkey=misc_feature;locus_tag=GGE_1030 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 40993 41131 . - . ID=id-GGE_1030-2;Dbxref=InterPro:IPR023399;Note=Gene3D:3.30.1920.10~bacteriophage mu%2C gpp%2C baseplate domain;gbkey=misc_feature;locus_tag=GGE_1030 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41008 41299 . - . ID=id-GGE_1030-3;Dbxref=InterPro:IPR010277,PFAM:PF05954;Note=phage_gpd~bacteriophage p2%2C gpd%2C late control;gbkey=misc_feature;locus_tag=GGE_1030 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41143 41218 . - . ID=id-GGE_1030-4;Note=Gene3D:2.30.300.10;gbkey=misc_feature;locus_tag=GGE_1030 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41017 41362 . + . ID=id-AFQR01000018.1:41017..41362;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41442 41985 . - . ID=id-AFQR01000018.1:41442..41985;Note=Gene3D:2.30.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41445 42102 . - . ID=id-AFQR01000018.1:41445..42102;Dbxref=InterPro:IPR010277,PFAM:PF05954;Note=phage_gpd~bacteriophage p2%2C gpd%2C late control;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41451 42054 . - . ID=id-AFQR01000018.1:41451..42054;Note=superfamily%3B label: COG4379 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41460 41988 . + . ID=id-AFQR01000018.1:41460..41988;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 41469 42084 . + . ID=id-AFQR01000018.1:41469..42084;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 42158 43603 . - . ID=gene-GGE_1031;Name=GGE_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1031 GCA_000222085.2|AFQR01000018.1 Genbank CDS 42158 43603 . - 0 ID=cds-EGT81793.1;Parent=gene-GGE_1031;Dbxref=GeneID:145633911,InterPro:IPR009826,PFAM:PF07157,NCBI_GP:EGT81793.1;Name=EGT81793.1;Note=ZP_01789631;gbkey=CDS;locus_tag=GGE_1031;product=64 kDa virion protein;protein_id=EGT81793.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 42170 42440 . - . ID=id-GGE_1031;Note=superfamily%3B label: DNA_circ_N superfamily;gbkey=misc_feature;locus_tag=GGE_1031 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 42173 42437 . - . ID=id-GGE_1031-2;Dbxref=InterPro:IPR009826,PFAM:PF07157;Note=dna_circ_n~dna circulation;gbkey=misc_feature;locus_tag=GGE_1031 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 42185 43577 . - . ID=id-GGE_1031-3;Note=multi-dom%3B label: COG4228;gbkey=misc_feature;locus_tag=GGE_1031 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 42194 42524 . - . ID=id-GGE_1031-4;Dbxref=InterPro:IPR009826;Note=BlastProDom:PD332323~vpn_haein_p71389~dna circulation;gbkey=misc_feature;locus_tag=GGE_1031 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 42227 43382 . + . ID=id-AFQR01000018.1:42227..43382;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 43606 45729 . - . ID=gene-GGE_1032;Name=GGE_1032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1032 GCA_000222085.2|AFQR01000018.1 Genbank CDS 43606 45729 . - 0 ID=cds-EGT81794.1;Parent=gene-GGE_1032;Dbxref=GeneID:145633912,InterPro:IPR013491,TIGRFAM:TIGR02675,NCBI_GP:EGT81794.1;Name=EGT81794.1;Note=ZP_01789632;gbkey=CDS;locus_tag=GGE_1032;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=EGT81794.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 43627 45475 . - . ID=id-GGE_1032;Note=superfamily%3B label: COG3941 superfamily;gbkey=misc_feature;locus_tag=GGE_1032 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 44366 44375 . - . ID=id-GGE_1032-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1032 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 43642 43846 . + . ID=id-AFQR01000018.1:43642..43846;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 43657 44938 . + . ID=id-AFQR01000018.1:43657..44938;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 43837 44083 . + . ID=id-AFQR01000018.1:43837..44083;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675;Note=tape_meas_nterm: tape measure domain~tape measure domain;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 45599 45608 . + . ID=id-AFQR01000018.1:45599..45608;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 45856 46215 . - . ID=gene-GGE_1033;Name=GGE_1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1033 GCA_000222085.2|AFQR01000018.1 Genbank CDS 45856 46215 . - 0 ID=cds-EGT81795.1;Parent=gene-GGE_1033;Dbxref=GeneID:145633913,InterPro:IPR019289,PFAM:PF10109,NCBI_GP:EGT81795.1;Name=EGT81795.1;Note=ZP_01789633;gbkey=CDS;locus_tag=GGE_1033;product=putative mu-like prophage FluMu protein gp41;protein_id=EGT81795.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 45856 46168 . - . ID=id-GGE_1033;Note=superfamily%3B label: FluMu_gp41 superfamily;gbkey=misc_feature;locus_tag=GGE_1033 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 45856 46156 . - . ID=id-GGE_1033-2;Dbxref=InterPro:IPR019289,PFAM:PF10109;Note=flumu_gp41~mu-like prophage flumu protein gp41;gbkey=misc_feature;locus_tag=GGE_1033 GCA_000222085.2|AFQR01000018.1 Genbank gene 46226 46579 . - . ID=gene-GGE_1034;Name=GGE_1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1034 GCA_000222085.2|AFQR01000018.1 Genbank CDS 46226 46579 . - 0 ID=cds-EGT81796.1;Parent=gene-GGE_1034;Dbxref=GeneID:145633914,InterPro:IPR019596,PFAM:PF10618,NCBI_GP:EGT81796.1;Name=EGT81796.1;Note=ZP_01789634;gbkey=CDS;locus_tag=GGE_1034;product=putative tail tube protein%2C bacteriophage;protein_id=EGT81796.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46226 46562 . - . ID=id-GGE_1034;Dbxref=InterPro:IPR019596,PFAM:PF10618;Note=tail_tube~tail tube protein%2C bacteriophage;gbkey=misc_feature;locus_tag=GGE_1034 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46226 46559 . - . ID=id-GGE_1034-2;Note=superfamily%3B label: Tail_tube superfamily;gbkey=misc_feature;locus_tag=GGE_1034 GCA_000222085.2|AFQR01000018.1 Genbank gene 46592 48055 . - . ID=gene-GGE_1035;Name=GGE_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1035 GCA_000222085.2|AFQR01000018.1 Genbank CDS 46592 48055 . - 0 ID=cds-EGT81797.1;Parent=gene-GGE_1035;Dbxref=GeneID:145633915,InterPro:IPR007067,PFAM:PF04984,NCBI_GP:EGT81797.1;Name=EGT81797.1;Note=ZP_01789635;gbkey=CDS;locus_tag=GGE_1035;product=sheath protein gpL;protein_id=EGT81797.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46592 48053 . - . ID=id-GGE_1035;Note=multi-dom%3B label: COG4386;gbkey=misc_feature;locus_tag=GGE_1035 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46616 48023 . - . ID=id-GGE_1035-2;Dbxref=InterPro:IPR007067,PFAM:PF04984;Note=phage_sheath_1~phage tail sheath protein;gbkey=misc_feature;locus_tag=GGE_1035 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46625 48014 . - . ID=id-GGE_1035-3;Note=superfamily%3B label: Phage_sheath_1 superfamily;gbkey=misc_feature;locus_tag=GGE_1035 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 47573 47582 . - . ID=id-GGE_1035-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1035 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46637 47003 . + . ID=id-AFQR01000018.1:46637..47003;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 46643 47471 . + . ID=id-AFQR01000018.1:46643..47471;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 48055 48237 . - . ID=gene-GGE_1036;Name=GGE_1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1036 GCA_000222085.2|AFQR01000018.1 Genbank CDS 48055 48237 . - 0 ID=cds-EGT81798.1;Parent=gene-GGE_1036;Dbxref=GeneID:145633916,PFAM:PF10948,NCBI_GP:EGT81798.1;Name=EGT81798.1;Note=ZP_01789636;gbkey=CDS;locus_tag=GGE_1036;product=Hypothetical protein;protein_id=EGT81798.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48064 48199 . - . ID=id-GGE_1036;Note=BlastProDom:PD027295~vg38_haein_p44232;gbkey=misc_feature;locus_tag=GGE_1036 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48064 48196 . - . ID=id-GGE_1036-2;Dbxref=PFAM:PF10948;Note=superfamily~duf2635%3B label: DUF2635 superfamily;gbkey=misc_feature;locus_tag=GGE_1036 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48091 48100 . + . ID=id-AFQR01000018.1:48091..48100;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 48227 48793 . - . ID=gene-GGE_1037;Name=GGE_1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1037 GCA_000222085.2|AFQR01000018.1 Genbank CDS 48227 48793 . - 0 ID=cds-EGT81799.1;Parent=gene-GGE_1037;Dbxref=GeneID:145633917,InterPro:IPR014972,PFAM:PF08873,NCBI_GP:EGT81799.1;Name=EGT81799.1;Note=ZP_01789637~CGSHi3655_00075;gbkey=CDS;locus_tag=GGE_1037;product=Hypothetical protein;protein_id=EGT81799.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48239 48758 . - . ID=id-GGE_1037;Note=superfamily%3B label: DUF1834 superfamily;gbkey=misc_feature;locus_tag=GGE_1037 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48239 48749 . - . ID=id-GGE_1037-2;Dbxref=InterPro:IPR014972,PFAM:PF08873;Note=duf1834~protein of unknown function duf1834;gbkey=misc_feature;locus_tag=GGE_1037 GCA_000222085.2|AFQR01000018.1 Genbank gene 48793 49212 . - . ID=gene-GGE_1038;Name=GGE_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1038 GCA_000222085.2|AFQR01000018.1 Genbank CDS 48793 49212 . - 0 ID=cds-EGT81800.1;Parent=gene-GGE_1038;Dbxref=GeneID:145633918,InterPro:IPR009752,PFAM:PF07030,NCBI_GP:EGT81800.1;Name=EGT81800.1;Note=ZP_01789638;gbkey=CDS;locus_tag=GGE_1038;product=Mu-like prophage protein GP36;protein_id=EGT81800.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48793 49210 . - . ID=id-GGE_1038;Note=superfamily%3B label: DUF1320 superfamily;gbkey=misc_feature;locus_tag=GGE_1038 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 48802 49165 . - . ID=id-GGE_1038-2;Dbxref=InterPro:IPR009752,PFAM:PF07030;Note=duf1320~protein of unknown function duf1320;gbkey=misc_feature;locus_tag=GGE_1038 GCA_000222085.2|AFQR01000018.1 Genbank gene 49212 49631 . - . ID=gene-GGE_1039;Name=GGE_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1039 GCA_000222085.2|AFQR01000018.1 Genbank CDS 49212 49631 . - 0 ID=cds-EGT81801.1;Parent=gene-GGE_1039;Dbxref=GeneID:145633919,InterPro:IPR003034,PFAM:PF02037,NCBI_GP:EGT81801.1;Name=EGT81801.1;Note=ZP_01789639;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||;locus_tag=GGE_1039;product=putative dNA-binding SAP;protein_id=EGT81801.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 49317 49521 . + . ID=id-AFQR01000018.1:49317..49521;Dbxref=InterPro:IPR003034,PFAM:PF02037;Note=sap~dna-binding sap;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 49329 49512 . + . ID=id-AFQR01000018.1:49329..49512;Note=Gene3D:1.10.720.30;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 49633 49642 . + . ID=id-AFQR01000018.1:49633..49642;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 49651 49660 . - . ID=id-AFQR01000018.1:49651..49660;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 49674 50597 . - . ID=gene-GGE_1040;Name=GGE_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1040 GCA_000222085.2|AFQR01000018.1 Genbank CDS 49674 50597 . - 0 ID=cds-EGT81802.1;Parent=gene-GGE_1040;Dbxref=InterPro:IPR018774,PFAM:PF10124,NCBI_GP:EGT81802.1;Name=EGT81802.1;Note=HI_1505;gbkey=CDS;locus_tag=GGE_1040;product=Mu-like prophage FluMu major head subunit;protein_id=EGT81802.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 49701 50571 . - . ID=id-GGE_1040;Dbxref=InterPro:IPR018774,PFAM:PF10124;Note=superfamily~mu-like_gpt~mu-like major head subunit gpt%2C prophage%3B label: Mu-like_gpT superfamily;gbkey=misc_feature;locus_tag=GGE_1040 GCA_000222085.2|AFQR01000018.1 Genbank gene 50597 50866 . - . ID=gene-GGE_1041;Name=GGE_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1041 GCA_000222085.2|AFQR01000018.1 Genbank CDS 50597 50866 . - 0 ID=cds-EGT81803.1;Parent=gene-GGE_1041;Dbxref=InterPro:IPR019295,PFAM:PF10123,NCBI_GP:EGT81803.1;Name=EGT81803.1;Note=Hypothetical mu-like prophage I protein;gbkey=CDS;locus_tag=GGE_1041;product=putative mu-like prophage I protein;protein_id=EGT81803.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50597 50864 . - . ID=id-GGE_1041;Note=superfamily%3B label: COG4388 superfamily;gbkey=misc_feature;locus_tag=GGE_1041 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50597 50849 . - . ID=id-GGE_1041-2;Dbxref=InterPro:IPR019295,PFAM:PF10123;Note=mu-like_pro~mu-like prophage i protein;gbkey=misc_feature;locus_tag=GGE_1041 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50627 50795 . + . ID=id-AFQR01000018.1:50627..50795;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50645 50723 . + . ID=id-AFQR01000018.1:50645..50723;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 50876 51661 . - . ID=gene-GGE_1042;Name=GGE_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1042 GCA_000222085.2|AFQR01000018.1 Genbank CDS 50876 51661 . - 0 ID=cds-EGT81804.1;Parent=gene-GGE_1042;Dbxref=InterPro:IPR019295,PFAM:PF10123,NCBI_GP:EGT81804.1;Name=EGT81804.1;Note=Hypothetical mu-like prophage I protein;gbkey=CDS;locus_tag=GGE_1042;product=putative mu-like prophage I protein;protein_id=EGT81804.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50876 51659 . - . ID=id-GGE_1042;Note=superfamily%3B label: COG4388 superfamily;gbkey=misc_feature;locus_tag=GGE_1042 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50948 51587 . - . ID=id-GGE_1042-2;Dbxref=InterPro:IPR019295,PFAM:PF10123;Note=mu-like_pro~mu-like prophage i protein;gbkey=misc_feature;locus_tag=GGE_1042 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 50963 51482 . + . ID=id-AFQR01000018.1:50963..51482;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 51882 52319 . - . ID=gene-GGE_1043;Name=GGE_1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1043 GCA_000222085.2|AFQR01000018.1 Genbank CDS 51882 52319 . - 0 ID=cds-EGT81805.1;Parent=gene-GGE_1043;Dbxref=GeneID:240950158,InterPro:IPR006522,PFAM:PF05069,TIGRFAM:TIGR01635,NCBI_GP:EGT81805.1;Name=EGT81805.1;Note=ZP_04754446;gbkey=CDS;locus_tag=GGE_1043;product=G protein;protein_id=EGT81805.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 51888 52299 . - . ID=id-GGE_1043;Note=superfamily%3B label: Phage_tail_S superfamily;gbkey=misc_feature;locus_tag=GGE_1043 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 51903 52281 . - . ID=id-GGE_1043-2;Dbxref=InterPro:IPR006522,TIGRFAM:TIGR01635;Note=tail_comp_s: phage virion morphogenesis p~phage virion morphogenesis (putative tail completion) protein;gbkey=misc_feature;locus_tag=GGE_1043 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 51906 52275 . - . ID=id-GGE_1043-3;Dbxref=PFAM:PF05069;Note=phage_tail_s;gbkey=misc_feature;locus_tag=GGE_1043 GCA_000222085.2|AFQR01000018.1 Genbank gene 52462 53805 . - . ID=gene-GGE_1044;Name=GGE_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1044 GCA_000222085.2|AFQR01000018.1 Genbank CDS 52462 53805 . - 0 ID=cds-EGT81806.1;Parent=gene-GGE_1044;Dbxref=GeneID:261868833,InterPro:IPR006528,PFAM:PF04233,TIGRFAM:TIGR01641,NCBI_GP:EGT81806.1;Name=EGT81806.1;Note=YP_003256755;gbkey=CDS;locus_tag=GGE_1044;product=F protein;protein_id=EGT81806.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 52480 53575 . - . ID=id-GGE_1044;Note=multi-dom%3B label: COG2369;gbkey=misc_feature;locus_tag=GGE_1044 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 52639 52858 . - . ID=id-GGE_1044-2;Note=superfamily%3B label: Phage_Mu_F superfamily;gbkey=misc_feature;locus_tag=GGE_1044 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 52642 52852 . - . ID=id-GGE_1044-3;Dbxref=InterPro:IPR006528,PFAM:PF04233;Note=phage_mu_f~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature;locus_tag=GGE_1044 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 52708 52798 . - . ID=id-GGE_1044-4;Dbxref=InterPro:IPR006528,TIGRFAM:TIGR01641;Note=phagespp1_gp7: phage putative head morp~phage putative head morphogenesis protein%2C spp1 gp7;gbkey=misc_feature;locus_tag=GGE_1044 GCA_000222085.2|AFQR01000018.1 Genbank gene 53795 55354 . - . ID=gene-GGE_1045;Name=GGE_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1045 GCA_000222085.2|AFQR01000018.1 Genbank CDS 53795 55354 . - 0 ID=cds-EGT81807.1;Parent=gene-GGE_1045;Dbxref=GeneID:145633925,InterPro:IPR009279,PFAM:PF06074,NCBI_GP:EGT81807.1;Name=EGT81807.1;Note=ZP_01789645~CGSHi3655_00115;gbkey=CDS;locus_tag=GGE_1045;product=Hypothetical protein;protein_id=EGT81807.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 53795 55352 . - . ID=id-GGE_1045;Note=superfamily%3B label: COG4383 superfamily;gbkey=misc_feature;locus_tag=GGE_1045 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 53795 55349 . - . ID=id-GGE_1045-2;Dbxref=InterPro:IPR009279,PFAM:PF06074;Note=duf935~protein of unknown function duf935;gbkey=misc_feature;locus_tag=GGE_1045 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 53804 55343 . - . ID=id-GGE_1045-3;Note=multi-dom%3B label: DUF935;gbkey=misc_feature;locus_tag=GGE_1045 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 53861 55235 . + . ID=id-AFQR01000018.1:53861..55235;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 54066 54075 . + . ID=id-AFQR01000018.1:54066..54075;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 55365 56915 . - . ID=gene-GGE_1046;Name=GGE_1046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank CDS 55365 56915 . - 0 ID=cds-EGT81808.1;Parent=gene-GGE_1046;Dbxref=InterPro:IPR004921,InterPro:IPR012036,PFAM:PF03237,PIR:PIRSF007056,NCBI_GP:EGT81808.1;Name=EGT81808.1;Note=HI_1500;gbkey=CDS;locus_tag=GGE_1046;product=Mu-like prophage FluMu protein gp28;protein_id=EGT81808.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 55365 56910 . - . ID=id-GGE_1046;Dbxref=InterPro:IPR012036,PIR:PIRSF007056;Note=uncharacterised conserved protein%2C ucp007056 type~uncharacterised conserved protein ucp007056;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 55401 56880 . - . ID=id-GGE_1046-2;Note=superfamily%3B label: COG4373 superfamily;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 55485 56685 . - . ID=id-GGE_1046-3;Note=multi-dom%3B label: Terminase_6;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 55488 56265 . - . ID=id-GGE_1046-4;Dbxref=InterPro:IPR004921,PFAM:PF03237;Note=terminase_6~bacteriophage terminase%2C large subunit;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 56392 56401 . - . ID=id-GGE_1046-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 56889 56898 . - . ID=id-GGE_1046-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1046 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 55404 55827 . + . ID=id-AFQR01000018.1:55404..55827;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 56915 57484 . - . ID=gene-GGE_1047;Name=GGE_1047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1047 GCA_000222085.2|AFQR01000018.1 Genbank CDS 56915 57484 . - 0 ID=cds-EGT81809.1;Parent=gene-GGE_1047;Dbxref=GeneID:145633927,InterPro:IPR021874,PFAM:PF11985,NCBI_GP:EGT81809.1;Name=EGT81809.1;Note=ZP_01789647;gbkey=CDS;locus_tag=GGE_1047;product=Mu-like phage gp27;protein_id=EGT81809.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 56936 57458 . - . ID=id-GGE_1047;Dbxref=InterPro:IPR021874,PFAM:PF11985;Note=superfamily~duf3486~protein of unknown function duf3486%3B label: DUF3486 superfamily;gbkey=misc_feature;locus_tag=GGE_1047 GCA_000222085.2|AFQR01000018.1 Genbank gene 57507 57800 . - . ID=gene-GGE_1048;Name=GGE_1048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1048 GCA_000222085.2|AFQR01000018.1 Genbank CDS 57507 57800 . - 0 ID=cds-EGT81810.1;Parent=gene-GGE_1048;Dbxref=GeneID:145633928,InterPro:IPR011991,InterPro:IPR013668,PFAM:PF08461,NCBI_GP:EGT81810.1;Name=EGT81810.1;Note=ZP_01789648;gbkey=CDS;locus_tag=GGE_1048;product=putative ribonuclease R winged-helix domain-containing protein;protein_id=EGT81810.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 57531 57684 . - . ID=id-GGE_1048;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1048 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 57549 57705 . - . ID=id-GGE_1048-2;Dbxref=InterPro:IPR013668,PFAM:PF08461;Note=hth_12~ribonuclease r winged-helix domain;gbkey=misc_feature;locus_tag=GGE_1048 GCA_000222085.2|AFQR01000018.1 Genbank gene 57797 58126 . - . ID=gene-GGE_1049;Name=GGE_1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1049 GCA_000222085.2|AFQR01000018.1 Genbank CDS 57797 58126 . - 0 ID=cds-EGT81811.1;Parent=gene-GGE_1049;Dbxref=GeneID:145633929,InterPro:IPR020269,PFAM:PF10805,NCBI_GP:EGT81811.1;Name=EGT81811.1;Note=ZP_01789649;gbkey=CDS;locus_tag=GGE_1049;product=Mu-like phage gp25;protein_id=EGT81811.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 57809 58115 . - . ID=id-GGE_1049;Dbxref=PFAM:PF10805;Note=superfamily~duf2730%3B label: DUF2730 superfamily;gbkey=misc_feature;locus_tag=GGE_1049 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 57860 58055 . - . ID=id-GGE_1049-2;Dbxref=InterPro:IPR020269;Note=BlastProDom:PD283729~uncharacterised_hi1498_bac~bacteriophage mu%2C gp25;gbkey=misc_feature;locus_tag=GGE_1049 GCA_000222085.2|AFQR01000018.1 Genbank gene 58126 58362 . - . ID=gene-GGE_1050;Name=GGE_1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1050 GCA_000222085.2|AFQR01000018.1 Genbank CDS 58126 58362 . - 0 ID=cds-EGT81812.1;Parent=gene-GGE_1050;Dbxref=GeneID:145633930,InterPro:IPR000962,InterPro:IPR012783,InterPro:IPR020458,InterPro:IPR020460,PFAM:PF01258,TIGRFAM:TIGR02419,NCBI_GP:EGT81812.1;Name=EGT81812.1;Note=ZP_01789650;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||;locus_tag=GGE_1050;product=putative glucocorticoid receptor-like DNA-binding domain-containing protein;protein_id=EGT81812.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58126 58360 . - . ID=id-GGE_1050;Dbxref=InterPro:IPR000962;Note=ProfileScan:PS51128~zf_dksa_2~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature;locus_tag=GGE_1050 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58126 58192 . - . ID=id-GGE_1050-2;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1050 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58135 58336 . - . ID=id-GGE_1050-3;Dbxref=InterPro:IPR012783,TIGRFAM:TIGR02419;Note=superfamily~c4_trar_proteo: phage/conjugal plasmid~zinc finger%2C c4 dksa/trar-type%3B label: zf-dskA_traR superfamily;gbkey=misc_feature;locus_tag=GGE_1050 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58162 58255 . + . ID=id-AFQR01000018.1:58162..58255;Dbxref=InterPro:IPR020460;Note=FPrintScan:PR00618~dksaznfinger~zinc finger%2C dksa/trar c4-type%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58165 58291 . + . ID=id-AFQR01000018.1:58165..58291;Dbxref=InterPro:IPR020460;Note=FPrintScan:PR00618~dksaznfinger~zinc finger%2C dksa/trar c4-type%2C bacteria;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58201 58255 . + . ID=id-AFQR01000018.1:58201..58255;Dbxref=InterPro:IPR020458;Note=PatternScan:PS01102~zf_dksa_1~zinc finger%2C dksa/trar c4-type conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58222 58249 . + . ID=id-AFQR01000018.1:58222..58249;Dbxref=InterPro:IPR000962,PFAM:PF01258;Note=zf-dska_trar~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58228 58255 . + . ID=id-AFQR01000018.1:58228..58255;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 58359 58493 . - . ID=gene-GGE_1051;Name=GGE_1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1051 GCA_000222085.2|AFQR01000018.1 Genbank CDS 58359 58493 . - 0 ID=cds-EGT81813.1;Parent=gene-GGE_1051;Dbxref=GeneID:145633931,NCBI_GP:EGT81813.1;Name=EGT81813.1;Note=ZP_01789651~CGSHi3655_00145;gbkey=CDS;locus_tag=GGE_1051;product=Hypothetical protein;protein_id=EGT81813.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 58486 58743 . - . ID=gene-GGE_1052;Name=GGE_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank CDS 58486 58743 . - 0 ID=cds-EGT81814.1;Parent=gene-GGE_1052;Dbxref=GeneID:229844266,InterPro:IPR020274,PFAM:PF10883,NCBI_GP:EGT81814.1;Name=EGT81814.1;Note=ZP_04464406;gbkey=CDS;locus_tag=GGE_1052;product=Hypothetical protein;protein_id=EGT81814.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58486 58657 . - . ID=id-GGE_1052;Dbxref=InterPro:IPR020274;Note=BlastProDom:PD060859~q58zc7_haein_q58zc7~uncharacterised protein family hi1496;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58492 58660 . - . ID=id-GGE_1052-2;Dbxref=PFAM:PF10883;Note=superfamily~duf2681%3B label: DUF2681 superfamily;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58495 58717 . - . ID=id-GGE_1052-3;Dbxref=PFAM:PF10883;Note=duf2681;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58498 58573 . - . ID=id-GGE_1052-4;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58501 58540 . - . ID=id-GGE_1052-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58501 58528 . - . ID=id-GGE_1052-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58543 58669 . - . ID=id-GGE_1052-7;Note=superfamily%3B label: DUF2681 superfamily;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58543 58663 . - . ID=id-GGE_1052-8;Dbxref=InterPro:IPR020274;Note=BlastProDom:PD060859~q58zc7_haein_q58zc7~uncharacterised protein family hi1496;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58558 58573 . - . ID=id-GGE_1052-9;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_1052 GCA_000222085.2|AFQR01000018.1 Genbank gene 58743 59033 . - . ID=gene-GGE_1053;Name=GGE_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1053 GCA_000222085.2|AFQR01000018.1 Genbank CDS 58743 59033 . - 0 ID=cds-EGT81815.1;Parent=gene-GGE_1053;Dbxref=GeneID:229844267,InterPro:IPR020300,PFAM:PF10841,NCBI_GP:EGT81815.1;Name=EGT81815.1;Note=ZP_04464407;gbkey=CDS;locus_tag=GGE_1053;product=Hypothetical protein;protein_id=EGT81815.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58743 58932 . - . ID=id-GGE_1053;Dbxref=InterPro:IPR020300;Note=BlastProDom:PD062017~q7vnk6_haedu_q7vnk6~uncharacterised protein family hi1495;gbkey=misc_feature;locus_tag=GGE_1053 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58758 58923 . - . ID=id-GGE_1053-2;Note=superfamily%3B label: DUF2644 superfamily;gbkey=misc_feature;locus_tag=GGE_1053 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58761 58917 . - . ID=id-GGE_1053-3;Dbxref=InterPro:IPR020300,PFAM:PF10841;Note=duf2644~uncharacterised protein family hi1495;gbkey=misc_feature;locus_tag=GGE_1053 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58803 58803 . + . ID=id-AFQR01000018.1:58803..58803;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 58812 58881 . + . ID=id-AFQR01000018.1:58812..58881;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 59030 59197 . - . ID=gene-GGE_1054;Name=GGE_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1054 GCA_000222085.2|AFQR01000018.1 Genbank CDS 59030 59197 . - 0 ID=cds-EGT81816.1;Parent=gene-GGE_1054;Dbxref=GeneID:145635925,NCBI_GP:EGT81816.1;Name=EGT81816.1;Note=ZP_01791612~CGSHiAA_00575;gbkey=CDS;locus_tag=GGE_1054;product=Hypothetical protein;protein_id=EGT81816.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59110 59119 . + . ID=id-AFQR01000018.1:59110..59119;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 59187 59693 . - . ID=gene-GGE_1055;Name=GGE_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1055 GCA_000222085.2|AFQR01000018.1 Genbank CDS 59187 59693 . - 0 ID=cds-EGT81817.1;Parent=gene-GGE_1055;Dbxref=GeneID:229844269,InterPro:IPR008565,InterPro:IPR018537,PFAM:PF05838,PFAM:PF09374,NCBI_GP:EGT81817.1;Name=EGT81817.1;Note=ZP_04464409;gbkey=CDS;locus_tag=GGE_1055;product=putative peptidoglycan binding domain-containing protein;protein_id=EGT81817.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59202 59667 . - . ID=id-GGE_1055;Note=Gene3D:1.20.141.10;gbkey=misc_feature;locus_tag=GGE_1055 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59214 59433 . - . ID=id-GGE_1055-2;Dbxref=InterPro:IPR008565,PFAM:PF05838;Note=superfamily~duf847~protein of unknown function duf847%3B label: DUF847 superfamily;gbkey=misc_feature;locus_tag=GGE_1055 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59379 59466 . + . ID=id-AFQR01000018.1:59379..59466;Dbxref=InterPro:IPR018537,PFAM:PF09374;Note=superfamily~pg_binding_3~peptidoglycan binding domain%3B label: PG_binding_3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 59775 60203 . - . ID=gene-GGE_1056;Name=GGE_1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1056 GCA_000222085.2|AFQR01000018.1 Genbank CDS 59775 60203 . - 0 ID=cds-EGT81818.1;Parent=gene-GGE_1056;Dbxref=GeneID:319897544,InterPro:IPR009057,InterPro:IPR014875,PFAM:PF08765,NCBI_GP:EGT81818.1;Name=EGT81818.1;Note=YP_004135741;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_1056;product=putative mor transcription activator;protein_id=EGT81818.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59808 60147 . - . ID=id-GGE_1056;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_1056 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59940 60024 . - . ID=id-GGE_1056-2;Dbxref=InterPro:IPR014875,PFAM:PF08765;Note=mor~mor transcription activator;gbkey=misc_feature;locus_tag=GGE_1056 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 59943 60024 . - . ID=id-GGE_1056-3;Note=superfamily%3B label: Mor superfamily;gbkey=misc_feature;locus_tag=GGE_1056 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 60018 60027 . - . ID=id-GGE_1056-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1056 GCA_000222085.2|AFQR01000018.1 Genbank gene 60308 60526 . - . ID=gene-GGE_1057;Name=GGE_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1057 GCA_000222085.2|AFQR01000018.1 Genbank CDS 60308 60526 . - 0 ID=cds-EGT81819.1;Parent=gene-GGE_1057;Dbxref=GeneID:270585822,NCBI_GP:EGT81819.1;Name=EGT81819.1;Note=ZP_06221398;gbkey=CDS;locus_tag=GGE_1057;product=Hypothetical protein;protein_id=EGT81819.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 60538 61173 . - . ID=gene-GGE_1058;Name=GGE_1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1058 GCA_000222085.2|AFQR01000018.1 Genbank CDS 60538 61173 . - 0 ID=cds-EGT81820.1;Parent=gene-GGE_1058;Dbxref=GeneID:319897546,InterPro:IPR013557,PFAM:PF08346,NCBI_GP:EGT81820.1;Name=EGT81820.1;Note=YP_004135743;gbkey=CDS;locus_tag=GGE_1058;product=phage anti-repressor protein;protein_id=EGT81820.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 60565 60886 . - . ID=id-GGE_1058;Note=superfamily%3B label: AntA superfamily;gbkey=misc_feature;locus_tag=GGE_1058 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 60601 60763 . - . ID=id-GGE_1058-2;Dbxref=InterPro:IPR013557,PFAM:PF08346;Note=anta~anta/antb antirepressor;gbkey=misc_feature;locus_tag=GGE_1058 GCA_000222085.2|AFQR01000018.1 Genbank gene 61455 61856 . - . ID=gene-GGE_1059;Name=GGE_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1059 GCA_000222085.2|AFQR01000018.1 Genbank CDS 61455 61856 . - 0 ID=cds-EGT81821.1;Parent=gene-GGE_1059;Dbxref=GeneID:319897547,InterPro:IPR009363,PFAM:PF06252,NCBI_GP:EGT81821.1;Name=EGT81821.1;Note=YP_004135744;gbkey=CDS;locus_tag=GGE_1059;product=Hypothetical protein;protein_id=EGT81821.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 61512 61791 . - . ID=id-GGE_1059;Note=superfamily%3B label: DUF1018 superfamily;gbkey=misc_feature;locus_tag=GGE_1059 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 61512 61785 . - . ID=id-GGE_1059-2;Dbxref=InterPro:IPR009363,PFAM:PF06252;Note=duf1018~protein of unknown function gp16;gbkey=misc_feature;locus_tag=GGE_1059 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 61603 61612 . + . ID=id-AFQR01000018.1:61603..61612;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 61846 62394 . - . ID=gene-GGE_1060;Name=GGE_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1060 GCA_000222085.2|AFQR01000018.1 Genbank CDS 61846 62394 . - 0 ID=cds-EGT81822.1;Parent=gene-GGE_1060;Dbxref=GeneID:229844273,NCBI_GP:EGT81822.1;Name=EGT81822.1;Note=ZP_04464413~CGSHi6P18H1_08125;gbkey=CDS;locus_tag=GGE_1060;product=Hypothetical protein;protein_id=EGT81822.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 62513 62570 . - . ID=id-AFQR01000018.1:62513..62570;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 62828 62984 . - . ID=id-AFQR01000018.1:62828..62984;Note=superfamily%3B label: DUF551 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 62852 62960 . - . ID=id-AFQR01000018.1:62852..62960;Dbxref=InterPro:IPR007539,PFAM:PF04448;Note=duf551~domain of unknown function duf551;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 63786 64122 . - . ID=id-AFQR01000018.1:63786..64122;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 63819 64035 . - . ID=id-AFQR01000018.1:63819..64035;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 63940 63949 . - . ID=id-AFQR01000018.1:63940..63949;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 64380 64577 . - . ID=gene-GGE_1061;Name=GGE_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1061 GCA_000222085.2|AFQR01000018.1 Genbank CDS 64380 64577 . - 0 ID=cds-EGT81823.1;Parent=gene-GGE_1061;Dbxref=GeneID:229844281,NCBI_GP:EGT81823.1;Name=EGT81823.1;Note=ZP_04464421~CGSHi6P18H1_08165;gbkey=CDS;locus_tag=GGE_1061;product=Hypothetical protein;protein_id=EGT81823.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 64752 65369 . - . ID=gene-GGE_1062;Name=GGE_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1062 GCA_000222085.2|AFQR01000018.1 Genbank CDS 64752 65369 . - 0 ID=cds-EGT81824.1;Parent=gene-GGE_1062;Dbxref=GeneID:145634274,InterPro:IPR021505,PFAM:PF11363,NCBI_GP:EGT81824.1;Name=EGT81824.1;Note=ZP_01789985;gbkey=CDS;locus_tag=GGE_1062;product=putative sulfate transport protein CysZ;protein_id=EGT81824.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 64782 65337 . - . ID=id-GGE_1062;Note=superfamily%3B label: DUF3164 superfamily;gbkey=misc_feature;locus_tag=GGE_1062 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 64782 65334 . - . ID=id-GGE_1062-2;Dbxref=InterPro:IPR021505,PFAM:PF11363;Note=duf3164~protein of unknown function duf3164;gbkey=misc_feature;locus_tag=GGE_1062 GCA_000222085.2|AFQR01000018.1 Genbank gene 65370 65561 . - . ID=gene-GGE_1063;Name=GGE_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1063 GCA_000222085.2|AFQR01000018.1 Genbank CDS 65370 65561 . - 0 ID=cds-EGT81825.1;Parent=gene-GGE_1063;Dbxref=GeneID:145634273,InterPro:IPR013196,PFAM:PF08279,NCBI_GP:EGT81825.1;Name=EGT81825.1;Note=ZP_01789984;gbkey=CDS;locus_tag=GGE_1063;product=putative helix-turn-helix%2C type 11;protein_id=EGT81825.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65421 65433 . + . ID=id-AFQR01000018.1:65421..65433;Dbxref=InterPro:IPR013196,PFAM:PF08279;Note=hth_11~helix-turn-helix%2C type 11;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 65570 65866 . - . ID=gene-GGE_1064;Name=GGE_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1064 GCA_000222085.2|AFQR01000018.1 Genbank CDS 65570 65866 . - 0 ID=cds-EGT81826.1;Parent=gene-GGE_1064;Dbxref=GeneID:270693720,NCBI_GP:EGT81826.1;Name=EGT81826.1;Note=ZP_06222958%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_1064;product=hypothetical protein;protein_id=EGT81826.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank gene 65877 66758 . - . ID=gene-GGE_1065;Name=GGE_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank CDS 65877 66758 . - 0 ID=cds-EGT81827.1;Parent=gene-GGE_1065;Dbxref=GeneID:319776713,InterPro:IPR001387,NCBI_GP:EGT81827.1;Name=EGT81827.1;Note=YP_004139201;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||;locus_tag=GGE_1065;product=phage transposase;protein_id=EGT81827.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65889 66735 . - . ID=id-GGE_1065;Note=multi-dom%3B label: COG2842;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65889 66027 . - . ID=id-GGE_1065-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65892 66027 . - . ID=id-GGE_1065-3;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65895 66048 . - . ID=id-GGE_1065-4;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 66108 66324 . - . ID=id-GGE_1065-5;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 66141 66237 . - . ID=id-GGE_1065-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 66144 66285 . - . ID=id-GGE_1065-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_1065 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 65916 66576 . + . ID=id-AFQR01000018.1:65916..66576;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 66831 66858 . - . ID=id-AFQR01000018.1:66831..66858;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 66876 67110 . + . ID=id-AFQR01000018.1:66876..67110;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 67219 69174 . - . ID=gene-GGE_1066;Name=GGE_1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1066 GCA_000222085.2|AFQR01000018.1 Genbank CDS 67219 69174 . - 0 ID=cds-EGT81828.1;Parent=gene-GGE_1066;Dbxref=GeneID:319776714,InterPro:IPR001584,InterPro:IPR003314,InterPro:IPR009004,InterPro:IPR009061,InterPro:IPR011991,InterPro:IPR012337,InterPro:IPR015378,PFAM:PF00665,PFAM:PF02316,PFAM:PF09299,NCBI_GP:EGT81828.1;Name=EGT81828.1;Note=YP_004139202;Ontology_term=GO:0015074,GO:0003677,GO:0003676,GO:0000166;gbkey=CDS;go_function=DNA binding|0003677||,nucleic acid binding|0003676||,nucleotide binding|0000166||;go_process=DNA integration|0015074||;locus_tag=GGE_1066;product=phage transposase;protein_id=EGT81828.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67219 67438 . - . ID=id-GGE_1066;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_1066 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67219 67432 . - . ID=id-GGE_1066-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1066 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67240 67525 . - . ID=id-GGE_1066-3;Note=superfamily%3B label: Mu_DNA_bind superfamily;gbkey=misc_feature;locus_tag=GGE_1066 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67240 67510 . - . ID=id-GGE_1066-4;Dbxref=InterPro:IPR003314,PFAM:PF02316;Note=mu_dna_bind~transposase mua/repressor ci%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1066 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67285 68965 . + . ID=id-AFQR01000018.1:67285..68965;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67372 68758 . + . ID=id-AFQR01000018.1:67372..68758;Dbxref=InterPro:IPR009004;Note=Gene3D:2.30.30.130~transposase%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67402 68725 . + . ID=id-AFQR01000018.1:67402..68725;Note=superfamily%3B label: Mu-transpos_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67405 68722 . + . ID=id-AFQR01000018.1:67405..68722;Dbxref=InterPro:IPR015378,PFAM:PF09299;Note=mu-transpos_c~transposase-like%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67456 68680 . + . ID=id-AFQR01000018.1:67456..68680;Dbxref=InterPro:IPR015378;Note=superfamily:SSF50610~mu transposase domain~transposase-like%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67462 68137 . + . ID=id-AFQR01000018.1:67462..68137;Note=HMMPanther:PTHR24559~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67486 68113 . + . ID=id-AFQR01000018.1:67486..68113;Note=superfamily%3B label: rve superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67501 68104 . + . ID=id-AFQR01000018.1:67501..68104;Dbxref=InterPro:IPR001584,PFAM:PF00665;Note=rve~integrase%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67867 67984 . + . ID=id-AFQR01000018.1:67867..67984;Dbxref=InterPro:IPR001584;Note=ProfileScan:PS50994~integrase~integrase%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67894 67993 . + . ID=id-AFQR01000018.1:67894..67993;Note=Gene3D:3.30.420.10;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 67903 68017 . + . ID=id-AFQR01000018.1:67903..68017;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 69165 69395 . - . ID=gene-GGE_1067;Name=GGE_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1067 GCA_000222085.2|AFQR01000018.1 Genbank CDS 69165 69395 . - 0 ID=cds-EGT81829.1;Parent=gene-GGE_1067;Dbxref=GeneID:145637160,InterPro:IPR010982,NCBI_GP:EGT81829.1;Name=EGT81829.1;Note=ZP_01792822;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;locus_tag=GGE_1067;product=Ner-like DNA-binding protein;protein_id=EGT81829.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69165 69384 . - . ID=id-GGE_1067;Note=superfamily%3B label: Nlp superfamily;gbkey=misc_feature;locus_tag=GGE_1067 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69165 69375 . - . ID=id-GGE_1067-2;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_1067 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69171 69375 . - . ID=id-GGE_1067-3;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1067 GCA_000222085.2|AFQR01000018.1 Genbank gene 69626 70114 . + . ID=gene-GGE_1068;Name=GGE_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1068 GCA_000222085.2|AFQR01000018.1 Genbank CDS 69626 70114 . + 0 ID=cds-EGT81830.1;Parent=gene-GGE_1068;Dbxref=GeneID:240950183,InterPro:IPR003314,InterPro:IPR009061,InterPro:IPR011991,PFAM:PF02316,NCBI_GP:EGT81830.1;Name=EGT81830.1;Note=ZP_04754471;Ontology_term=GO:0003677,GO:0000166;gbkey=CDS;go_function=DNA binding|0003677||,nucleotide binding|0000166||;locus_tag=GGE_1068;product=putative winged helix-turn-helix transcription repressor DNA-binding protein;protein_id=EGT81830.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69626 69851 . + . ID=id-GGE_1068;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature;locus_tag=GGE_1068 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69626 69842 . + . ID=id-GGE_1068-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_1068 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69656 69896 . + . ID=id-GGE_1068-3;Dbxref=InterPro:IPR003314,PFAM:PF02316;Note=mu_dna_bind~transposase mua/repressor ci%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_1068 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 69644 69725 . - . ID=id-AFQR01000018.1:69644..69725;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 71078 72070 . + . ID=gene-GGE_1069;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=GGE_1069 GCA_000222085.2|AFQR01000018.1 Genbank CDS 71078 72070 . + 0 ID=cds-EGT81831.1;Parent=gene-GGE_1069;Dbxref=GeneID:1174633,InterPro:IPR004695,InterPro:IPR011552,PFAM:PF03595,TIGRFAM:TIGR00816,NCBI_GP:EGT81831.1;Name=EGT81831.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;gene=tehA;go_component=integral to membrane|0016021||;go_process=transmembrane transport|0055085||;locus_tag=GGE_1069;product=Tellurite resistance protein tehA;protein_id=EGT81831.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71144 71147 . + . ID=id-GGE_1069;Note=transmembrane_regions;gbkey=misc_feature;gene=tehA;locus_tag=GGE_1069 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71153 71981 . + . ID=id-GGE_1069-2;Dbxref=InterPro:IPR011552,TIGRFAM:TIGR00816;Note=tdt: c4-dicarboxylate transporter/malic acid~tellurite resistance teha;gbkey=misc_feature;gene=tehA;locus_tag=GGE_1069 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71156 71981 . + . ID=id-GGE_1069-3;Note=specific~superfamily%3B label: TDT superfamily;gbkey=misc_feature;gene=tehA;locus_tag=GGE_1069 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71162 71852 . + . ID=id-GGE_1069-4;Dbxref=InterPro:IPR004695,PFAM:PF03595;Note=c4dic_mal_tran~c4-dicarboxylate transporter/malic acid transport protein;gbkey=misc_feature;gene=tehA;locus_tag=GGE_1069 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71111 71831 . - . ID=id-AFQR01000018.1:71111..71831;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71138 71549 . - . ID=id-AFQR01000018.1:71138..71549;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71972 . - . ID=id-AFQR01000018.1:71147..71972;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71885 . - . ID=id-AFQR01000018.1:71147..71885;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71804 . - . ID=id-AFQR01000018.1:71147..71804;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71717 . - . ID=id-AFQR01000018.1:71147..71717;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71621 . - . ID=id-AFQR01000018.1:71147..71621;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71360 . - . ID=id-AFQR01000018.1:71147..71360;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 71147 71255 . - . ID=id-AFQR01000018.1:71147..71255;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 72122 72841 . - . ID=gene-GGE_1070;Name=GGE_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank CDS 72122 72841 . - 0 ID=cds-EGT81832.1;Parent=gene-GGE_1070;Dbxref=GeneID:1175502,InterPro:IPR001378,InterPro:IPR023368,InterPro:IPR023370,PFAM:PF01980,TIGRFAM:TIGR00104,NCBI_GP:EGT81832.1;Name=EGT81832.1;Note=HI_0510;gbkey=CDS;locus_tag=GGE_1070;product=UPF0066 protein;protein_id=EGT81832.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72122 72815 . - . ID=id-GGE_1070;Dbxref=InterPro:IPR023370;Note=superfamily:SSF118196~yaeb-like~uncharacterised protein family upf0066%2C yaeb-like domain;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72122 72572 . - . ID=id-GGE_1070-2;Dbxref=InterPro:IPR001378,TIGRFAM:TIGR00104;Note=yaeb_af0241: probable methyltransferase%2C~uncharacterised protein family upf0066;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72131 72824 . - . ID=id-GGE_1070-3;Note=HMMPanther:PTHR12818~family not named;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72137 72584 . - . ID=id-GGE_1070-4;Dbxref=InterPro:IPR023370;Note=Gene3D:2.40.30.70~uncharacterised protein family upf0066%2C yaeb-like domain;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72146 72515 . - . ID=id-GGE_1070-5;Note=specific~superfamily%3B label: UPF0066;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72176 72500 . - . ID=id-GGE_1070-6;Dbxref=InterPro:IPR001378,PFAM:PF01980;Note=upf0066~uncharacterised protein family upf0066;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72323 72332 . - . ID=id-GGE_1070-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1070 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72158 72383 . + . ID=id-AFQR01000018.1:72158..72383;Dbxref=InterPro:IPR023368;Note=PatternScan:PS01318~upf0066~uncharacterised protein family upf0066%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72884 72893 . + . ID=id-AFQR01000018.1:72884..72893;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 72903 73814 . + . ID=gene-GGE_1071;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank CDS 72903 73814 . + 0 ID=cds-EGT81833.1;Parent=gene-GGE_1071;Dbxref=GeneID:1170914,InterPro:IPR000537,InterPro:IPR004657,PFAM:PF01040,TIGRFAM:TIGR00751,NCBI_GP:EGT81833.1;Name=EGT81833.1;Ontology_term=GO:0009234,GO:0016021,GO:0004659,GO:0016740;gbkey=CDS;gene=menA;go_component=integral to membrane|0016021||;go_function=prenyltransferase activity|0004659||,transferase activity|0016740||;go_process=menaquinone biosynthetic process|0009234||;locus_tag=GGE_1071;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=EGT81833.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72918 73677 . + . ID=id-GGE_1071;Note=HMMPanther:PTHR13929~family not named;gbkey=misc_feature;gene=menA;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72942 72972 . + . ID=id-GGE_1071-2;Note=transmembrane_regions;gbkey=misc_feature;gene=menA;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72945 73761 . + . ID=id-GGE_1071-3;Dbxref=InterPro:IPR004657,TIGRFAM:TIGR00751;Note=mena: 1%2C4-dihydroxy-2-naphthoate octaprenylt~1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;gbkey=misc_feature;gene=menA;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72945 73725 . + . ID=id-GGE_1071-4;Note=superfamily%3B label: UbiA superfamily;gbkey=misc_feature;gene=menA;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72960 73689 . + . ID=id-GGE_1071-5;Dbxref=InterPro:IPR000537,PFAM:PF01040;Note=ubia~ubia prenyltransferase family;gbkey=misc_feature;gene=menA;locus_tag=GGE_1071 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72939 73374 . - . ID=id-AFQR01000018.1:72939..73374;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72939 73044 . - . ID=id-AFQR01000018.1:72939..73044;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72945 73278 . - . ID=id-AFQR01000018.1:72945..73278;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72951 73767 . - . ID=id-AFQR01000018.1:72951..73767;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72963 73446 . - . ID=id-AFQR01000018.1:72963..73446;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72963 73272 . - . ID=id-AFQR01000018.1:72963..73272;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72972 73743 . - . ID=id-AFQR01000018.1:72972..73743;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72972 73581 . - . ID=id-AFQR01000018.1:72972..73581;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72972 73350 . - . ID=id-AFQR01000018.1:72972..73350;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72972 73191 . - . ID=id-AFQR01000018.1:72972..73191;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 72972 73023 . - . ID=id-AFQR01000018.1:72972..73023;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 73867 74364 . + . ID=gene-GGE_1072;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank CDS 73867 74364 . + 0 ID=cds-EGT81834.1;Parent=gene-GGE_1072;Dbxref=GeneID:81336487,InterPro:IPR005493,InterPro:IPR010203,InterPro:IPR014339,PFAM:PF03737,TIGRFAM:TIGR01935,TIGRFAM:TIGR02998,NCBI_GP:EGT81834.1;Name=EGT81834.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||;go_process=regulation of RNA metabolic process|0051252||;locus_tag=GGE_1072;product=Regulator of ribonuclease activity A;protein_id=EGT81834.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73867 74350 . + . ID=id-GGE_1072;Dbxref=InterPro:IPR014339,TIGRFAM:TIGR02998;Note=superfamily~rraa_entero: regulator of ribonuclease ac~ribonuclease e inhibitor rraa%2C gammaproteobacteria%3B label: Methyltransf_6 superfamily;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73867 74329 . + . ID=id-GGE_1072-2;Dbxref=InterPro:IPR010203;Note=HAMAP:MF_00471~rraa~ribonuclease e inhibitor rraa;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73867 74323 . + . ID=id-GGE_1072-3;Dbxref=InterPro:IPR005493,PFAM:PF03737;Note=methyltransf_6~ribonuclease e inhibitor rraa/dimethylmenaquinone methyltransferase;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73873 74347 . + . ID=id-GGE_1072-4;Dbxref=InterPro:IPR005493;Note=superfamily:SSF89562~rraa-like~ribonuclease e inhibitor rraa/dimethylmenaquinone methyltransferase;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73876 74335 . + . ID=id-GGE_1072-5;Dbxref=InterPro:IPR005493;Note=Gene3D:3.50.30.40~ribonuclease e inhibitor rraa/dimethylmenaquinone methyltransferase;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 73882 74317 . + . ID=id-GGE_1072-6;Dbxref=InterPro:IPR010203,TIGRFAM:TIGR01935;Note=not-meng: rraa family~ribonuclease e inhibitor rraa;gbkey=misc_feature;gene=rraA;locus_tag=GGE_1072 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74376 74385 . + . ID=id-AFQR01000018.1:74376..74385;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74394 74403 . - . ID=id-AFQR01000018.1:74394..74403;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 74519 75907 . + . ID=gene-GGE_1073;Name=GGE_1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank CDS 74519 75907 . + 0 ID=cds-EGT81835.1;Parent=gene-GGE_1073;Dbxref=InterPro:IPR001898,PFAM:PF00939,TIGRFAM:TIGR00785,NCBI_GP:EGT81835.1;Name=EGT81835.1;Note=HI_0608;Ontology_term=GO:0006814,GO:0055085,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=sodium ion transport|0006814||,transmembrane transport|0055085||;locus_tag=GGE_1073;product=putative sodium/sulphate symporter;protein_id=EGT81835.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74558 74573 . + . ID=id-GGE_1073;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74561 74561 . + . ID=id-GGE_1073-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74579 75839 . + . ID=id-GGE_1073-3;Note=HMMPanther:PTHR10283~solute carrier family 13 member;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75830 . + . ID=id-GGE_1073-4;Dbxref=InterPro:IPR001898,PFAM:PF00939;Note=na_sulph_symp~sodium/sulphate symporter;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74612 75806 . + . ID=id-GGE_1073-5;Dbxref=InterPro:IPR001898,TIGRFAM:TIGR00785;Note=dass: transporter%2C divalent anion:na+ sympor~sodium/sulphate symporter;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74744 75674 . + . ID=id-GGE_1073-6;Note=specific~superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;locus_tag=GGE_1073 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74549 74639 . - . ID=id-AFQR01000018.1:74549..74639;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74555 75158 . - . ID=id-AFQR01000018.1:74555..75158;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74555 74948 . - . ID=id-AFQR01000018.1:74555..74948;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74570 75746 . - . ID=id-AFQR01000018.1:74570..75746;Dbxref=InterPro:IPR001898;Note=PatternScan:PS01271~na_sulfate~sodium/sulphate symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74573 75650 . - . ID=id-AFQR01000018.1:74573..75650;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74573 75467 . - . ID=id-AFQR01000018.1:74573..75467;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74579 75026 . - . ID=id-AFQR01000018.1:74579..75026;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75836 . - . ID=id-AFQR01000018.1:74588..75836;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75731 . - . ID=id-AFQR01000018.1:74588..75731;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75563 . - . ID=id-AFQR01000018.1:74588..75563;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75380 . - . ID=id-AFQR01000018.1:74588..75380;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75269 . - . ID=id-AFQR01000018.1:74588..75269;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 75143 . - . ID=id-AFQR01000018.1:74588..75143;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 74870 . - . ID=id-AFQR01000018.1:74588..74870;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 74759 . - . ID=id-AFQR01000018.1:74588..74759;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74588 74654 . - . ID=id-AFQR01000018.1:74588..74654;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 74591 74672 . - . ID=id-AFQR01000018.1:74591..74672;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 76012 76806 . - . ID=gene-GGE_1074;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank CDS 76012 76806 . - 0 ID=cds-EGT81836.1;Parent=gene-GGE_1074;Dbxref=GeneID:1169725,InterPro:IPR000672,InterPro:IPR016040,InterPro:IPR020630,InterPro:IPR020631,InterPro:IPR020867,PFAM:PF00763,PFAM:PF02882,NCBI_GP:EGT81836.1;Name=EGT81836.1;Ontology_term=GO:0009396,GO:0008152,GO:0055114,GO:0005488,GO:0003824;gbkey=CDS;gene=folD;go_function=binding|0005488||,catalytic activity|0003824||;go_process=folic acid-containing compound biosynthetic process|0009396||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_1074;product=5%2C10-methylene-tetrahydrofolate dehydrogenase/cyclohydrolase-like protein;protein_id=EGT81836.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76012 76804 . - . ID=id-GGE_1074;Dbxref=InterPro:IPR000672;Note=HAMAP:MF_01576~thf_dhg_cyh~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76012 76798 . - . ID=id-GGE_1074-2;Note=multi-dom%3B label: PRK10792;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76012 76795 . - . ID=id-GGE_1074-3;Note=HMMPanther:PTHR10025~tetrahydrofolate dehydrogenase/cyclohydrolase family member;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76012 76324 . - . ID=id-GGE_1074-4;Note=superfamily:SSF53223~aminoacid dehydrogenase-like domain;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76012 76321 . - . ID=id-GGE_1074-5;Note=superfamily%3B label: THF_DHG_CYH superfamily;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76021 76315 . - . ID=id-GGE_1074-6;Dbxref=InterPro:IPR020630,PFAM:PF00763;Note=thf_dhg_cyh~tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76024 76360 . - . ID=id-GGE_1074-7;Note=Gene3D:3.40.192.10;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76060 76081 . - . ID=id-GGE_1074-8;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76183 76192 . - . ID=id-GGE_1074-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76306 76504 . - . ID=id-GGE_1074-10;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76327 76489 . - . ID=id-GGE_1074-11;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76330 76486 . - . ID=id-GGE_1074-12;Dbxref=InterPro:IPR020631,PFAM:PF02882;Note=thf_dhg_cyh_c~tetrahydrofolate dehydrogenase/cyclohydrolase%2C nad(p)-binding domain;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76372 76381 . - . ID=id-GGE_1074-13;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=folD;locus_tag=GGE_1074 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76039 76735 . + . ID=id-AFQR01000018.1:76039..76735;Dbxref=InterPro:IPR020867;Note=PatternScan:PS00767~thf_dhg_cyh_2~tetrahydrofolate dehydrogenase/cyclohydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76063 76672 . + . ID=id-AFQR01000018.1:76063..76672;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76069 76723 . + . ID=id-AFQR01000018.1:76069..76723;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76075 76423 . + . ID=id-AFQR01000018.1:76075..76423;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76078 76288 . + . ID=id-AFQR01000018.1:76078..76288;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76090 76186 . + . ID=id-AFQR01000018.1:76090..76186;Dbxref=InterPro:IPR020867;Note=PatternScan:PS00766~thf_dhg_cyh_1~tetrahydrofolate dehydrogenase/cyclohydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76096 76183 . + . ID=id-AFQR01000018.1:76096..76183;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76102 76570 . + . ID=id-AFQR01000018.1:76102..76570;Dbxref=InterPro:IPR000672;Note=FPrintScan:PR00085~thfdhdrgnase~tetrahydrofolate dehydrogenase/cyclohydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 76825 76834 . + . ID=id-AFQR01000018.1:76825..76834;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 77350 80121 . + . ID=gene-GGE_1075;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank CDS 77350 80121 . + 0 ID=cds-EGT81837.1;Parent=gene-GGE_1075;Dbxref=GeneID:189029417,InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR014001,InterPro:IPR022737,PFAM:PF00176,PFAM:PF00271,PFAM:PF12137,NCBI_GP:EGT81837.1;Name=EGT81837.1;Ontology_term=GO:0005524,GO:0003677,GO:0004386,GO:0016817,GO:0003676;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||,DNA binding|0003677||,helicase activity|0004386||,hydrolase activity acting on acid anhydrides|0016817||,nucleic acid binding|0003676||;locus_tag=GGE_1075;product=RNA polymerase-associated protein rapA;protein_id=EGT81837.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77350 80113 . + . ID=id-GGE_1075;Note=HAMAP:MF_01821~helicase_rapa;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77356 80110 . + . ID=id-GGE_1075-2;Note=multi-dom%3B label: PRK04914;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77596 78118 . + . ID=id-GGE_1075-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77806 77845 . + . ID=id-GGE_1075-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77809 79627 . + . ID=id-GGE_1075-5;Note=HMMPanther:PTHR10799:SF40~atp-dependent helicase~HMMPanther:PTHR10799~swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily-related;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77815 78046 . + . ID=id-GGE_1075-6;Dbxref=InterPro:IPR000330,PFAM:PF00176;Note=snf2_n~snf2-related;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77836 77863 . + . ID=id-GGE_1075-7;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77908 78595 . + . ID=id-GGE_1075-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 79161 79170 . + . ID=id-GGE_1075-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rapA;locus_tag=GGE_1075 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77416 79936 . - . ID=id-AFQR01000018.1:77416..79936;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77437 79216 . - . ID=id-AFQR01000018.1:77437..79216;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77581 78784 . - . ID=id-AFQR01000018.1:77581..78784;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77740 78649 . - . ID=id-AFQR01000018.1:77740..78649;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77782 77863 . - . ID=id-AFQR01000018.1:77782..77863;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77815 78679 . - . ID=id-AFQR01000018.1:77815..78679;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 77818 78634 . - . ID=id-AFQR01000018.1:77818..78634;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 78445 79021 . - . ID=id-AFQR01000018.1:78445..79021;Dbxref=InterPro:IPR022737,PFAM:PF12137;Note=rapa_c~rna polymerase recycling%2C bacterial;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 80088 80783 . + . ID=gene-GGE_1076;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=GGE_1076 GCA_000222085.2|AFQR01000018.1 Genbank CDS 80088 80783 . + 0 ID=cds-EGT81838.1;Parent=gene-GGE_1076;Dbxref=GeneID:1175490,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR020103,PFAM:PF00849,NCBI_GP:EGT81838.1;Name=EGT81838.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_1076;product=Ribosomal large subunit pseudouridine synthase A;protein_id=EGT81838.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80166 80706 . + . ID=id-GGE_1076;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rluA;locus_tag=GGE_1076 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80166 80688 . + . ID=id-GGE_1076-2;Note=HMMPanther:PTHR10436~rna pseudouridylate synthase family protein;gbkey=misc_feature;gene=rluA;locus_tag=GGE_1076 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80190 80532 . + . ID=id-GGE_1076-3;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=rluA;locus_tag=GGE_1076 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80193 80628 . + . ID=id-GGE_1076-4;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rluA;locus_tag=GGE_1076 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80133 80304 . - . ID=id-AFQR01000018.1:80133..80304;Dbxref=InterPro:IPR006224;Note=PatternScan:PS01129~psi_rlu~pseudouridine synthase%2C rluc/rlud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 80810 81388 . + . ID=gene-GGE_1077;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank CDS 80810 81388 . + 0 ID=cds-EGT81839.1;Parent=gene-GGE_1077;Dbxref=GeneID:1169952,InterPro:IPR002610,InterPro:IPR022732,InterPro:IPR022764,PFAM:PF01694,PFAM:PF12122,NCBI_GP:EGT81839.1;Name=EGT81839.1;Ontology_term=GO:0016021,GO:0004252;gbkey=CDS;gene=glpG;go_component=integral to membrane|0016021||;go_function=serine-type endopeptidase activity|0004252||;locus_tag=GGE_1077;product=Rhomboid protease glpG;protein_id=EGT81839.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80810 80927 . + . ID=id-GGE_1077;Dbxref=InterPro:IPR022732,PFAM:PF12122;Note=duf3582~peptidase s54%2C glpg peptidase;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80822 81377 . + . ID=id-GGE_1077-2;Note=superfamily:SSF144091~rhomboid-like;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80840 81329 . + . ID=id-GGE_1077-3;Note=Gene3D:1.20.1540.10;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80843 80855 . + . ID=id-GGE_1077-4;Note=seg;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80849 80864 . + . ID=id-GGE_1077-5;Note=transmembrane_regions;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80951 81227 . + . ID=id-GGE_1077-6;Dbxref=InterPro:IPR022764,PFAM:PF01694;Note=rhomboid~peptidase s54%2C rhomboid domain;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80960 81227 . + . ID=id-GGE_1077-7;Dbxref=InterPro:IPR002610;Note=HMMPanther:PTHR22936~family not named~peptidase s54%2C rhomboid;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80963 81224 . + . ID=id-GGE_1077-8;Note=superfamily%3B label: Rhomboid superfamily;gbkey=misc_feature;gene=glpG;locus_tag=GGE_1077 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80854 80863 . - . ID=id-AFQR01000018.1:80854..80863;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80864 81305 . - . ID=id-AFQR01000018.1:80864..81305;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80864 81239 . - . ID=id-AFQR01000018.1:80864..81239;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80879 81128 . - . ID=id-AFQR01000018.1:80879..81128;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 80879 81026 . - . ID=id-AFQR01000018.1:80879..81026;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 81418 82170 . + . ID=gene-GGE_1078;Name=glpR;gbkey=Gene;gene=glpR;gene_biotype=protein_coding;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank CDS 81418 82170 . + 0 ID=cds-EGT81840.1;Parent=gene-GGE_1078;Dbxref=GeneID:1169955,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,PFAM:PF00455,PFAM:PF08220,NCBI_GP:EGT81840.1;Name=EGT81840.1;Ontology_term=GO:0006355,GO:0005622,GO:0003700;gbkey=CDS;gene=glpR;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_1078;product=Glycerol-3-phosphate regulon repressor;protein_id=EGT81840.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81418 82168 . + . ID=id-GGE_1078;Note=multi-dom%3B label: PRK10906;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81418 81583 . + . ID=id-GGE_1078-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81424 81658 . + . ID=id-GGE_1078-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81427 81586 . + . ID=id-GGE_1078-4;Dbxref=InterPro:IPR001034;Note=ProfileScan:PS51000~hth_deor_2~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81436 81586 . + . ID=id-GGE_1078-5;Dbxref=InterPro:IPR001034,PFAM:PF08220;Note=superfamily~hth_deor~transcription regulator hth%2C deor n-terminal%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81436 81523 . + . ID=id-GGE_1078-6;Dbxref=InterPro:IPR018356;Note=PatternScan:PS00894~hth_deor_1~transcription regulator%2C hth deor-type%2C conserved site;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81634 81907 . + . ID=id-GGE_1078-7;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81643 81886 . + . ID=id-GGE_1078-8;Note=superfamily%3B label: SugarP_isomerase superfamily;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81643 81718 . + . ID=id-GGE_1078-9;Note=Gene3D:3.30.750.70;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81649 81880 . + . ID=id-GGE_1078-10;Dbxref=InterPro:IPR014036,PFAM:PF00455;Note=deor~transcription regulator hth%2C deor;gbkey=misc_feature;gene=glpR;locus_tag=GGE_1078 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81463 81490 . - . ID=id-AFQR01000018.1:81463..81490;Dbxref=InterPro:IPR001034;Note=FPrintScan:PR00037~hthlacr~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 81475 81532 . - . ID=id-AFQR01000018.1:81475..81532;Dbxref=InterPro:IPR001034;Note=FPrintScan:PR00037~hthlacr~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82204 82213 . - . ID=id-AFQR01000018.1:82204..82213;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 82298 83050 . + . ID=gene-GGE_1079;Name=GGE_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1079 GCA_000222085.2|AFQR01000018.1 Genbank CDS 82298 83050 . + 0 ID=cds-EGT81841.1;Parent=gene-GGE_1079;Dbxref=InterPro:IPR007428,PFAM:PF04333,NCBI_GP:EGT81841.1;Name=EGT81841.1;Note=HI_0718;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_1079;product=putative lipoprotein;protein_id=EGT81841.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82298 83048 . + . ID=id-GGE_1079;Note=superfamily%3B label: VacJ superfamily;gbkey=misc_feature;locus_tag=GGE_1079 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82298 82355 . + . ID=id-GGE_1079-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_1079 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82382 82904 . + . ID=id-GGE_1079-3;Dbxref=InterPro:IPR007428,PFAM:PF04333;Note=vacj~vacj-like lipoprotein;gbkey=misc_feature;locus_tag=GGE_1079 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82318 82327 . - . ID=id-AFQR01000018.1:82318..82327;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82340 82397 . - . ID=id-AFQR01000018.1:82340..82397;Dbxref=InterPro:IPR007428;Note=FPrintScan:PR01805~vacjlipoprot~vacj-like lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82349 82451 . - . ID=id-AFQR01000018.1:82349..82451;Dbxref=InterPro:IPR007428;Note=FPrintScan:PR01805~vacjlipoprot~vacj-like lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82352 82718 . - . ID=id-AFQR01000018.1:82352..82718;Dbxref=InterPro:IPR007428;Note=FPrintScan:PR01805~vacjlipoprot~vacj-like lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 82352 82604 . - . ID=id-AFQR01000018.1:82352..82604;Dbxref=InterPro:IPR007428;Note=FPrintScan:PR01805~vacjlipoprot~vacj-like lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83057 83066 . + . ID=id-AFQR01000018.1:83057..83066;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83075 83084 . - . ID=id-AFQR01000018.1:83075..83084;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 83104 83496 . + . ID=gene-GGE_1080;Name=GGE_1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank CDS 83104 83496 . + 0 ID=cds-EGT81842.1;Parent=gene-GGE_1080;Dbxref=GeneID:1176471,InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,InterPro:IPR019897,PFAM:PF01042,TIGRFAM:TIGR00004,NCBI_GP:EGT81842.1;Name=EGT81842.1;Note=HI_0719;gbkey=CDS;locus_tag=GGE_1080;product=RutC family protein;protein_id=EGT81842.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83104 83491 . + . ID=id-GGE_1080;Dbxref=InterPro:IPR006175,InterPro:IPR013813;Note=Gene3D:3.30.1330.40~endoribonuclease l-psp/chorismate mutase-like~HMMPanther:PTHR11803~family not named~endoribonuclease l-psp;gbkey=misc_feature;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83113 83488 . + . ID=id-GGE_1080-2;Dbxref=InterPro:IPR013813;Note=superfamily:SSF55298~yjgf-like~endoribonuclease l-psp/chorismate mutase-like;gbkey=misc_feature;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83113 83485 . + . ID=id-GGE_1080-3;Dbxref=InterPro:IPR006056,TIGRFAM:TIGR00004;Note=tigr00004: putative endoribonuclease l-psp~yjgf-like protein;gbkey=misc_feature;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83128 83467 . + . ID=id-GGE_1080-4;Dbxref=InterPro:IPR006175,PFAM:PF01042;Note=ribonuc_l-psp~endoribonuclease l-psp;gbkey=misc_feature;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83158 83434 . + . ID=id-GGE_1080-5;Note=specific~superfamily%3B label: YjgF_YER057c_UK114_family;gbkey=misc_feature;locus_tag=GGE_1080 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83161 83419 . - . ID=id-AFQR01000018.1:83161..83419;Dbxref=InterPro:IPR019897;Note=PatternScan:PS01094~upf0076~yjgf-like protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83521 83530 . + . ID=id-AFQR01000018.1:83521..83530;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83551 83560 . - . ID=id-AFQR01000018.1:83551..83560;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 83664 84515 . + . ID=gene-GGE_1081;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=GGE_1081 GCA_000222085.2|AFQR01000018.1 Genbank CDS 83664 84515 . + 0 ID=cds-EGT81843.1;Parent=gene-GGE_1081;Dbxref=GeneID:1170415,InterPro:IPR001915,InterPro:IPR022919,PFAM:PF01435,NCBI_GP:EGT81843.1;Name=EGT81843.1;Ontology_term=GO:0006508,GO:0016020,GO:0004222;gbkey=CDS;gene=htpX;go_component=membrane|0016020||;go_function=metalloendopeptidase activity|0004222||;go_process=proteolysis|0006508||;locus_tag=GGE_1081;product=Protease HtpX;protein_id=EGT81843.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83664 84513 . + . ID=id-GGE_1081;Dbxref=InterPro:IPR022919;Note=superfamily~HAMAP:MF_00188~peptidase_m48~peptidase m48%2C protease htpx%2C putative%3B label: Peptidase_M48 superfamily;gbkey=misc_feature;gene=htpX;locus_tag=GGE_1081 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83679 83733 . + . ID=id-GGE_1081-2;Note=transmembrane_regions;gbkey=misc_feature;gene=htpX;locus_tag=GGE_1081 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83700 84480 . + . ID=id-GGE_1081-3;Note=HMMPanther:PTHR10120~caax prenyl protease 1;gbkey=misc_feature;gene=htpX;locus_tag=GGE_1081 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83817 84351 . + . ID=id-GGE_1081-4;Dbxref=InterPro:IPR001915,PFAM:PF01435;Note=peptidase_m48~peptidase m48;gbkey=misc_feature;gene=htpX;locus_tag=GGE_1081 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83733 84234 . - . ID=id-AFQR01000018.1:83733..84234;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83733 84123 . - . ID=id-AFQR01000018.1:83733..84123;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 83733 83760 . - . ID=id-AFQR01000018.1:83733..83760;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 84541 84798 . - . ID=gene-GGE_1082;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank CDS 84541 84798 . - 0 ID=cds-EGT81844.1;Parent=gene-GGE_1082;Dbxref=GeneID:166229854,InterPro:IPR001455,InterPro:IPR022931,PFAM:PF01206,NCBI_GP:EGT81844.1;Name=EGT81844.1;Ontology_term=GO:0008033,GO:0005737,GO:0016783;gbkey=CDS;gene=tusA;go_component=cytoplasm|0005737||;go_function=sulfurtransferase activity|0016783||;go_process=tRNA processing|0008033||;locus_tag=GGE_1082;product=Sulfurtransferase tusA;protein_id=EGT81844.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84541 84778 . - . ID=id-GGE_1082;Dbxref=InterPro:IPR022931;Note=HAMAP:MF_00413~thiourid_synth_a~sulphurtransferase tusa;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84541 84775 . - . ID=id-GGE_1082-2;Dbxref=InterPro:IPR001455;Note=Gene3D:3.30.110.40~sira-like;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84541 84772 . - . ID=id-GGE_1082-3;Dbxref=InterPro:IPR001455;Note=superfamily:SSF64307~sira-like~sira-like;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84565 84751 . - . ID=id-GGE_1082-4;Dbxref=InterPro:IPR001455,PFAM:PF01206;Note=sira~sira-like;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84568 84748 . - . ID=id-GGE_1082-5;Note=specific~superfamily%3B label: SirA;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84571 84616 . - . ID=id-GGE_1082-6;Dbxref=InterPro:IPR001455;Note=PatternScan:PS01148~upf0033~sira-like;gbkey=misc_feature;gene=tusA;locus_tag=GGE_1082 GCA_000222085.2|AFQR01000018.1 Genbank gene 84914 85534 . + . ID=gene-GGE_1083;Name=GGE_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank CDS 84914 85534 . + 0 ID=cds-EGT81845.1;Parent=gene-GGE_1083;Dbxref=GeneID:1176321,InterPro:IPR000640,InterPro:IPR001498,InterPro:IPR009022,InterPro:IPR015269,InterPro:IPR015796,InterPro:IPR020568,InterPro:IPR023582,PFAM:PF01205,PFAM:PF09186,TIGRFAM:TIGR00257,NCBI_GP:EGT81845.1;Name=EGT81845.1;Note=HI_0722;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||;locus_tag=GGE_1083;product=IMPACT family member;protein_id=EGT81845.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84914 85526 . + . ID=id-GGE_1083;Dbxref=InterPro:IPR015796,TIGRFAM:TIGR00257;Note=impact_yigz: hypothetical protein%2C yig~impact family%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84914 85523 . + . ID=id-GGE_1083-2;Note=multi-dom%3B label: IMPACT_YIGZ;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84914 85316 . + . ID=id-GGE_1083-3;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84920 85298 . + . ID=id-GGE_1083-4;Dbxref=InterPro:IPR001498;Note=Gene3D:3.30.230.30~impact;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84923 85514 . + . ID=id-GGE_1083-5;Dbxref=InterPro:IPR023582;Note=HMMPanther:PTHR16301~family not named~impact family;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84935 84944 . + . ID=id-GGE_1083-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 84965 85244 . + . ID=id-GGE_1083-7;Dbxref=InterPro:IPR001498,PFAM:PF01205;Note=superfamily~upf0029~impact%3B label: UPF0029 superfamily;gbkey=misc_feature;locus_tag=GGE_1083 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85079 85337 . - . ID=id-AFQR01000018.1:85079..85337;Note=superfamily%3B label: DUF1949 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85082 85337 . - . ID=id-AFQR01000018.1:85082..85337;Dbxref=InterPro:IPR015269,PFAM:PF09186;Note=duf1949~uncharacterised protein family upf0029%2C impact;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85118 85322 . - . ID=id-AFQR01000018.1:85118..85322;Dbxref=InterPro:IPR000640;Note=Gene3D:3.30.70.240~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85121 85319 . - . ID=id-AFQR01000018.1:85121..85319;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 85537 86382 . + . ID=gene-GGE_1084;Name=GGE_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1084 GCA_000222085.2|AFQR01000018.1 Genbank CDS 85537 86382 . + 0 ID=cds-EGT81846.1;Parent=gene-GGE_1084;Dbxref=InterPro:IPR003445,PFAM:PF02386,NCBI_GP:EGT81846.1;Name=EGT81846.1;Note=Hypothetical cation transporter;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||;go_process=cation transport|0006812||,transmembrane transport|0055085||;locus_tag=GGE_1084;product=putative cation transporter;protein_id=EGT81846.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85546 85567 . + . ID=id-GGE_1084;Note=seg;gbkey=misc_feature;locus_tag=GGE_1084 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85558 85606 . + . ID=id-GGE_1084-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1084 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85576 86344 . + . ID=id-GGE_1084-3;Note=superfamily%3B label: TrkH superfamily;gbkey=misc_feature;locus_tag=GGE_1084 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85588 85960 . - . ID=id-AFQR01000018.1:85588..85960;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85591 85654 . - . ID=id-AFQR01000018.1:85591..85654;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85606 86260 . - . ID=id-AFQR01000018.1:85606..86260;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85606 86092 . - . ID=id-AFQR01000018.1:85606..86092;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85606 85936 . - . ID=id-AFQR01000018.1:85606..85936;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85606 85744 . - . ID=id-AFQR01000018.1:85606..85744;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 85924 85996 . - . ID=id-AFQR01000018.1:85924..85996;Dbxref=InterPro:IPR003445,PFAM:PF02386;Note=trkh~cation transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank gene 86385 86999 . + . ID=gene-GGE_1085;Name=GGE_1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_1085 GCA_000222085.2|AFQR01000018.1 Genbank CDS 86385 86999 . + 0 ID=cds-EGT81847.1;Parent=gene-GGE_1085;Dbxref=InterPro:IPR003445,PFAM:PF02386,NCBI_GP:EGT81847.1;Name=EGT81847.1;Note=Hypothetical cation transporter;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||;go_process=cation transport|0006812||,transmembrane transport|0055085||;locus_tag=GGE_1085;product=putative cation transporter;protein_id=EGT81847.1;transl_table=11 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86391 86988 . + . ID=id-GGE_1085;Dbxref=InterPro:IPR003445,PFAM:PF02386;Note=trkh~cation transporter;gbkey=misc_feature;locus_tag=GGE_1085 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86394 86439 . + . ID=id-GGE_1085-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_1085 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86412 86421 . + . ID=id-GGE_1085-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_1085 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86457 86928 . + . ID=id-GGE_1085-4;Note=superfamily%3B label: TrkH superfamily;gbkey=misc_feature;locus_tag=GGE_1085 GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86415 86580 . - . ID=id-AFQR01000018.1:86415..86580;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86454 86916 . - . ID=id-AFQR01000018.1:86454..86916;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86454 86814 . - . ID=id-AFQR01000018.1:86454..86814;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86454 86736 . - . ID=id-AFQR01000018.1:86454..86736;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 86454 86544 . - . ID=id-AFQR01000018.1:86454..86544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 87004 87019 . + . ID=id-AFQR01000018.1:87004..87019;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000018.1 Genbank sequence_feature 87024 87033 . - . ID=id-AFQR01000018.1:87024..87033;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000017.1 1 98989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000017.1 Genbank region 1 98989 . + . ID=AFQR01000017.1:1..98989;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000017.1 Genbank gene 1545 2084 . - . ID=gene-GGE_0884;Name=GGE_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0884 GCA_000222085.2|AFQR01000017.1 Genbank CDS 1545 2084 . - 0 ID=cds-EGT82136.1;Parent=gene-GGE_0884;Dbxref=GeneID:229845292,InterPro:IPR006521,PFAM:PF09684,TIGRFAM:TIGR01634,NCBI_GP:EGT82136.1;Name=EGT82136.1;Note=ZP_04465424;gbkey=CDS;locus_tag=GGE_0884;product=Putative bacteriophage P2-related tail formation protein gpI;protein_id=EGT82136.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 1569 1962 . - . ID=id-GGE_0884;Dbxref=InterPro:IPR006521,PFAM:PF09684,TIGRFAM:TIGR01634;Note=superfamily~tail_p2_i: phage tail protein i~phage tail protein i~tail_p2_i%3B label: Tail_P2_I superfamily;gbkey=misc_feature;locus_tag=GGE_0884 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2004 2013 . - . ID=id-GGE_0884-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0884 GCA_000222085.2|AFQR01000017.1 Genbank gene 2071 2985 . - . ID=gene-GGE_0885;Name=GGE_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0885 GCA_000222085.2|AFQR01000017.1 Genbank CDS 2071 2985 . - 0 ID=cds-EGT82137.1;Parent=gene-GGE_0885;Dbxref=GeneID:145636833,InterPro:IPR006949,InterPro:IPR014507,PFAM:PF04865,PIR:PIRSF020481,NCBI_GP:EGT82137.1;Name=EGT82137.1;Note=ZP_01792498;gbkey=CDS;locus_tag=GGE_0885;product=Putative phage-related baseplate assembly protein;protein_id=EGT82137.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2071 2980 . - . ID=id-GGE_0885;Dbxref=InterPro:IPR014507,PIR:PIRSF020481;Note=predicted baseplate assembly protein%2C phage type~baseplate assembly protein j%2C predicted;gbkey=misc_feature;locus_tag=GGE_0885 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2077 2962 . - . ID=id-GGE_0885-2;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_0885 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2332 2602 . - . ID=id-GGE_0885-3;Dbxref=InterPro:IPR006949,PFAM:PF04865;Note=baseplate_j~baseplate assembly protein j-like%2C predicted;gbkey=misc_feature;locus_tag=GGE_0885 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2350 2359 . - . ID=id-GGE_0885-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0885 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2095 2773 . + . ID=id-AFQR01000017.1:2095..2773;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 2982 3320 . - . ID=gene-GGE_0886;Name=GGE_0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0886 GCA_000222085.2|AFQR01000017.1 Genbank CDS 2982 3320 . - 0 ID=cds-EGT82138.1;Parent=gene-GGE_0886;Dbxref=GeneID:145636834,InterPro:IPR007048,InterPro:IPR015801,PFAM:PF04965,NCBI_GP:EGT82138.1;Name=EGT82138.1;Note=ZP_01792499;Ontology_term=GO:0009308,GO:0055114,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;go_function=copper ion binding|0005507||,primary amine oxidase activity|0008131||,quinone binding|0048038||;go_process=amine metabolic process|0009308||,oxidation-reduction process|0055114||;locus_tag=GGE_0886;product=Putative baseplate assembly protein W;protein_id=EGT82138.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 2982 3243 . - . ID=id-GGE_0886;Note=superfamily%3B label: GPW_gp25 superfamily;gbkey=misc_feature;locus_tag=GGE_0886 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3003 3258 . - . ID=id-GGE_0886-2;Dbxref=InterPro:IPR015801;Note=Gene3D:3.10.450.40~copper amine oxidase%2C n2/n3-terminal;gbkey=misc_feature;locus_tag=GGE_0886 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3012 3240 . - . ID=id-GGE_0886-3;Dbxref=InterPro:IPR007048,PFAM:PF04965;Note=gpw_gp25~gpw/gp25;gbkey=misc_feature;locus_tag=GGE_0886 GCA_000222085.2|AFQR01000017.1 Genbank gene 3322 3921 . - . ID=gene-GGE_0887;Name=GGE_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0887 GCA_000222085.2|AFQR01000017.1 Genbank CDS 3322 3921 . - 0 ID=cds-EGT82139.1;Parent=gene-GGE_0887;Dbxref=GeneID:145630927,InterPro:IPR006531,InterPro:IPR013046,PFAM:PF04717,TIGRFAM:TIGR01644,NCBI_GP:EGT82139.1;Name=EGT82139.1;Note=ZP_01786704;gbkey=CDS;locus_tag=GGE_0887;product=Putative phage P2-like baseplate assembly protein;protein_id=EGT82139.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3343 3898 . - . ID=id-GGE_0887;Dbxref=InterPro:IPR013046,TIGRFAM:TIGR01644;Note=phage_p2_v: phage baseplate assembly prote~phage-related baseplate assembly protein v;gbkey=misc_feature;locus_tag=GGE_0887 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3343 3889 . - . ID=id-GGE_0887-2;Note=superfamily%3B label: Phage_base_V superfamily;gbkey=misc_feature;locus_tag=GGE_0887 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3376 3547 . - . ID=id-GGE_0887-3;Dbxref=InterPro:IPR006531,PFAM:PF04717;Note=phage_base_v~gp5 n-terminal-like domain;gbkey=misc_feature;locus_tag=GGE_0887 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 3373 3763 . + . ID=id-AFQR01000017.1:3373..3763;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 4032 4208 . - . ID=gene-GGE_0888;Name=GGE_0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0888 GCA_000222085.2|AFQR01000017.1 Genbank CDS 4032 4208 . - 0 ID=cds-EGT82140.1;Parent=gene-GGE_0888;Dbxref=GeneID:68250176,NCBI_GP:EGT82140.1;Name=EGT82140.1;Note=YP_249288;gbkey=CDS;locus_tag=GGE_0888;product=Hypothetical protein;protein_id=EGT82140.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank gene 4285 7059 . - . ID=gene-GGE_0889;Name=GGE_0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0889 GCA_000222085.2|AFQR01000017.1 Genbank CDS 4285 7059 . - 0 ID=cds-EGT82141.1;Parent=gene-GGE_0889;Dbxref=InterPro:IPR010090,PFAM:PF10145,TIGRFAM:TIGR01760,NCBI_GP:EGT82141.1;Name=EGT82141.1;Note=Hypothetical phage tail tape measure protein;gbkey=CDS;locus_tag=GGE_0889;product=putative phage tail tape measure protein;protein_id=EGT82141.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4366 4477 . - . ID=id-GGE_0889;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0889 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4900 5365 . - . ID=id-GGE_0889-2;Dbxref=InterPro:IPR010090,TIGRFAM:TIGR01760;Note=tape_meas_tp901: phage tail tape meas~phage tail tape measure protein tp901%2C core region;gbkey=misc_feature;locus_tag=GGE_0889 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4918 5332 . - . ID=id-GGE_0889-3;Note=multi-dom%3B label: tape_meas_TP901;gbkey=misc_feature;locus_tag=GGE_0889 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 6727 6736 . - . ID=id-GGE_0889-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0889 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4315 6169 . + . ID=id-AFQR01000017.1:4315..6169;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4321 5386 . + . ID=id-AFQR01000017.1:4321..5386;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4321 4519 . + . ID=id-AFQR01000017.1:4321..4519;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4321 4408 . + . ID=id-AFQR01000017.1:4321..4408;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4327 4591 . + . ID=id-AFQR01000017.1:4327..4591;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4330 5965 . + . ID=id-AFQR01000017.1:4330..5965;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4333 4768 . + . ID=id-AFQR01000017.1:4333..4768;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4336 4867 . + . ID=id-AFQR01000017.1:4336..4867;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4354 6133 . + . ID=id-AFQR01000017.1:4354..6133;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4354 5953 . + . ID=id-AFQR01000017.1:4354..5953;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4465 6682 . + . ID=id-AFQR01000017.1:4465..6682;Note=multi-dom%3B label: tape_meas_lam_C;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4519 4576 . + . ID=id-AFQR01000017.1:4519..4576;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 4894 5041 . + . ID=id-AFQR01000017.1:4894..5041;Dbxref=InterPro:IPR010090,PFAM:PF10145;Note=phagemin_tail~phage tail tape measure protein tp901%2C core region;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 7128 7388 . + . ID=gene-GGE_0890;Name=GGE_0890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0890 GCA_000222085.2|AFQR01000017.1 Genbank CDS 7128 7388 . + 0 ID=cds-EGT82142.1;Parent=gene-GGE_0890;Dbxref=GeneID:145630921,NCBI_GP:EGT82142.1;Name=EGT82142.1;Note=ZP_01786698~CGSHi22421_02966;gbkey=CDS;locus_tag=GGE_0890;product=Hypothetical protein;protein_id=EGT82142.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7134 7197 . + . ID=id-GGE_0890;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0890 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7188 7293 . - . ID=id-AFQR01000017.1:7188..7293;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7197 7212 . - . ID=id-AFQR01000017.1:7197..7212;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 7366 7824 . - . ID=gene-GGE_0891;Name=GGE_0891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0891 GCA_000222085.2|AFQR01000017.1 Genbank CDS 7366 7824 . - 0 ID=cds-EGT82143.1;Parent=gene-GGE_0891;Dbxref=GeneID:319775366,InterPro:IPR006522,PFAM:PF05069,TIGRFAM:TIGR01635,NCBI_GP:EGT82143.1;Name=EGT82143.1;Note=YP_004137854;gbkey=CDS;locus_tag=GGE_0891;product=putative phage protein;protein_id=EGT82143.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7372 7816 . - . ID=id-GGE_0891;Dbxref=InterPro:IPR006522,TIGRFAM:TIGR01635;Note=tail_comp_s: phage virion morphogenesis p~phage virion morphogenesis (putative tail completion) protein;gbkey=misc_feature;locus_tag=GGE_0891 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7378 7810 . - . ID=id-GGE_0891-2;Dbxref=PFAM:PF05069;Note=phage_tail_s;gbkey=misc_feature;locus_tag=GGE_0891 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7378 7762 . - . ID=id-GGE_0891-3;Note=superfamily%3B label: Phage_tail_S superfamily;gbkey=misc_feature;locus_tag=GGE_0891 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7562 7571 . - . ID=id-GGE_0891-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0891 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7405 7774 . + . ID=id-AFQR01000017.1:7405..7774;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7408 7525 . + . ID=id-AFQR01000017.1:7408..7525;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 7824 8294 . - . ID=gene-GGE_0892;Name=GGE_0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0892 GCA_000222085.2|AFQR01000017.1 Genbank CDS 7824 8294 . - 0 ID=cds-EGT82144.1;Parent=gene-GGE_0892;Dbxref=GeneID:309751645,InterPro:IPR009678,PFAM:PF06891,NCBI_GP:EGT82144.1;Name=EGT82144.1;Note=ADO81629;gbkey=CDS;locus_tag=GGE_0892;product=Putative bacteriophage tail completion protein;protein_id=EGT82144.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 7824 8217 . - . ID=id-GGE_0892;Dbxref=InterPro:IPR009678,PFAM:PF06891;Note=superfamily~p2_phage_gpr~p2 phage tail completion r%3B label: P2_Phage_GpR superfamily;gbkey=misc_feature;locus_tag=GGE_0892 GCA_000222085.2|AFQR01000017.1 Genbank gene 8520 8735 . - . ID=gene-GGE_0893;Name=GGE_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank CDS 8520 8735 . - 0 ID=cds-EGT82145.1;Parent=gene-GGE_0893;Dbxref=GeneID:145639972,InterPro:IPR000962,InterPro:IPR012783,PFAM:PF01258,TIGRFAM:TIGR02419,NCBI_GP:EGT82145.1;Name=EGT82145.1;Note=ZP_01795571;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||;locus_tag=GGE_0893;product=putative zinc finger%2C DksA/TraR C4-type;protein_id=EGT82145.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8520 8733 . - . ID=id-GGE_0893;Dbxref=InterPro:IPR000962;Note=ProfileScan:PS51128~zf_dksa_2~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8520 8694 . - . ID=id-GGE_0893-2;Dbxref=InterPro:IPR000962;Note=ProfileScan:PS51128~zf_dksa_2~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8526 8667 . - . ID=id-GGE_0893-3;Note=superfamily%3B label: zf-dskA_traR superfamily;gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8529 8703 . - . ID=id-GGE_0893-4;Dbxref=InterPro:IPR012783,TIGRFAM:TIGR02419;Note=superfamily~c4_trar_proteo: phage/conjugal plasmid~zinc finger%2C c4 dksa/trar-type%3B label: zf-dskA_traR superfamily;gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8574 8619 . - . ID=id-GGE_0893-5;Dbxref=InterPro:IPR000962,PFAM:PF01258;Note=zf-dska_trar~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8580 8637 . - . ID=id-GGE_0893-6;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8619 8637 . - . ID=id-GGE_0893-7;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature;locus_tag=GGE_0893 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8613 8619 . + . ID=id-AFQR01000017.1:8613..8619;Dbxref=InterPro:IPR000962,PFAM:PF01258;Note=zf-dska_trar~zinc finger%2C dksa/trar c4-type;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8658 8667 . + . ID=id-AFQR01000017.1:8658..8667;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 8910 9260 . - . ID=gene-GGE_0894;Name=GGE_0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0894 GCA_000222085.2|AFQR01000017.1 Genbank CDS 8910 9260 . - 0 ID=cds-EGT82146.1;Parent=gene-GGE_0894;Dbxref=GeneID:229845303,NCBI_GP:EGT82146.1;Name=EGT82146.1;Note=ZP_04465435~CGSHi6P18H1_02074;gbkey=CDS;locus_tag=GGE_0894;product=Hypothetical protein;protein_id=EGT82146.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8943 8964 . - . ID=id-GGE_0894;Note=seg;gbkey=misc_feature;locus_tag=GGE_0894 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8946 8979 . - . ID=id-GGE_0894-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0894 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8946 9018 . + . ID=id-AFQR01000017.1:8946..9018;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8949 9090 . + . ID=id-AFQR01000017.1:8949..9090;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 8976 9087 . + . ID=id-AFQR01000017.1:8976..9087;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9024 9129 . + . ID=id-AFQR01000017.1:9024..9129;Note=superfamily%3B label: PHA02047 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 9245 9763 . - . ID=gene-GGE_0895;Name=GGE_0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0895 GCA_000222085.2|AFQR01000017.1 Genbank CDS 9245 9763 . - 0 ID=cds-EGT82147.1;Parent=gene-GGE_0895;Dbxref=GeneID:145630916,InterPro:IPR002196,InterPro:IPR023346,InterPro:IPR023347,PFAM:PF00959,NCBI_GP:EGT82147.1;Name=EGT82147.1;Note=ZP_01786693;Ontology_term=GO:0016998,GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||;go_process=cell wall macromolecule catabolic process|0016998||,peptidoglycan catabolic process|0009253||;locus_tag=GGE_0895;product=Putative phage-related lysozyme;protein_id=EGT82147.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9263 9746 . - . ID=id-GGE_0895;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature;locus_tag=GGE_0895 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9329 9674 . - . ID=id-GGE_0895-2;Dbxref=InterPro:IPR023347;Note=Gene3D:1.10.530.40~lysozyme domain;gbkey=misc_feature;locus_tag=GGE_0895 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9332 9656 . - . ID=id-GGE_0895-3;Note=specific~superfamily%3B label: endolysin_autolysin;gbkey=misc_feature;locus_tag=GGE_0895 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9410 9575 . - . ID=id-GGE_0895-4;Dbxref=InterPro:IPR002196,PFAM:PF00959;Note=phage_lysozyme~glycoside hydrolase%2C family 24;gbkey=misc_feature;locus_tag=GGE_0895 GCA_000222085.2|AFQR01000017.1 Genbank gene 9756 9977 . - . ID=gene-GGE_0896;Name=GGE_0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0896 GCA_000222085.2|AFQR01000017.1 Genbank CDS 9756 9977 . - 0 ID=cds-EGT82148.1;Parent=gene-GGE_0896;Dbxref=GeneID:260582911,NCBI_GP:EGT82148.1;Name=EGT82148.1;Note=ZP_05850695%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_0896;product=hypothetical protein;protein_id=EGT82148.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9786 9816 . - . ID=id-GGE_0896;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0896 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9795 9918 . + . ID=id-AFQR01000017.1:9795..9918;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9795 9846 . + . ID=id-AFQR01000017.1:9795..9846;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9825 9849 . + . ID=id-AFQR01000017.1:9825..9849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 9979 10188 . - . ID=gene-GGE_0897;Name=GGE_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0897 GCA_000222085.2|AFQR01000017.1 Genbank CDS 9979 10188 . - 0 ID=cds-EGT82149.1;Parent=gene-GGE_0897;Dbxref=GeneID:68250190,InterPro:IPR008861,PFAM:PF05489,NCBI_GP:EGT82149.1;Name=EGT82149.1;Note=YP_249302;gbkey=CDS;locus_tag=GGE_0897;product=putative phage tail protein X;protein_id=EGT82149.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 9979 10147 . - . ID=id-GGE_0897;Dbxref=InterPro:IPR008861,PFAM:PF05489;Note=superfamily~phage_tail_x~phage tail protein x%3B label: Phage_tail_X superfamily;gbkey=misc_feature;locus_tag=GGE_0897 GCA_000222085.2|AFQR01000017.1 Genbank gene 10188 10694 . - . ID=gene-GGE_0898;Name=GGE_0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0898 GCA_000222085.2|AFQR01000017.1 Genbank CDS 10188 10694 . - 0 ID=cds-EGT82150.1;Parent=gene-GGE_0898;Dbxref=GeneID:145636849,InterPro:IPR009225,PFAM:PF05926,NCBI_GP:EGT82150.1;Name=EGT82150.1;Note=ZP_01792514;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||;locus_tag=GGE_0898;product=putative phage head completion;protein_id=EGT82150.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 10284 10599 . - . ID=id-GGE_0898;Dbxref=InterPro:IPR009225,PFAM:PF05926;Note=superfamily~phage_gpl~phage head completion%3B label: Phage_GPL superfamily;gbkey=misc_feature;locus_tag=GGE_0898 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 10275 10575 . + . ID=id-AFQR01000017.1:10275..10575;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 10763 10772 . - . ID=id-AFQR01000017.1:10763..10772;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 10901 11557 . - . ID=gene-GGE_0899;Name=GGE_0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0899 GCA_000222085.2|AFQR01000017.1 Genbank CDS 10901 11557 . - 0 ID=cds-EGT82151.1;Parent=gene-GGE_0899;Dbxref=GeneID:229845308,InterPro:IPR010270,PFAM:PF05944,NCBI_GP:EGT82151.1;Name=EGT82151.1;Note=ZP_04465440;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||,endonuclease activity|0004519||;go_process=viral capsid assembly|0019069||;locus_tag=GGE_0899;product=Putative terminase%2C endonuclease subunit;protein_id=EGT82151.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 11000 11297 . - . ID=id-GGE_0899;Note=superfamily%3B label: Phage_term_smal superfamily;gbkey=misc_feature;locus_tag=GGE_0899 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 11003 11291 . - . ID=id-GGE_0899-2;Dbxref=InterPro:IPR010270,PFAM:PF05944;Note=phage_term_smal~phage small terminase subunit;gbkey=misc_feature;locus_tag=GGE_0899 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 10937 11396 . + . ID=id-AFQR01000017.1:10937..11396;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 11569 12618 . - . ID=gene-GGE_0900;Name=GGE_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0900 GCA_000222085.2|AFQR01000017.1 Genbank CDS 11569 12618 . - 0 ID=cds-EGT82152.1;Parent=gene-GGE_0900;Dbxref=GeneID:145642115,InterPro:IPR006441,PFAM:PF05125,TIGRFAM:TIGR01551,NCBI_GP:EGT82152.1;Name=EGT82152.1;Note=ZP_01797685;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||;locus_tag=GGE_0900;product=Putative major capsid protein;protein_id=EGT82152.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 11587 12565 . - . ID=id-GGE_0900;Dbxref=InterPro:IPR006441,PFAM:PF05125,TIGRFAM:TIGR01551;Note=superfamily~major_capsid_p2: phage major capsid p~phage major capsid protein%2C p2~phage_cap_p2~phage major capsid protein%2C p2%3B label: Phage_cap_P2 superfamily;gbkey=misc_feature;locus_tag=GGE_0900 GCA_000222085.2|AFQR01000017.1 Genbank gene 12640 13458 . - . ID=gene-GGE_0901;Name=GGE_0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0901 GCA_000222085.2|AFQR01000017.1 Genbank CDS 12640 13458 . - 0 ID=cds-EGT82153.1;Parent=gene-GGE_0901;Dbxref=GeneID:301155045,InterPro:IPR009228,PFAM:PF05929,NCBI_GP:EGT82153.1;Name=EGT82153.1;Note=CBW14508;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||;locus_tag=GGE_0901;product=phage capsid scaffolding;protein_id=EGT82153.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 12655 13393 . - . ID=id-GGE_0901;Dbxref=InterPro:IPR009228,PFAM:PF05929;Note=phage_gpo~phage capsid scaffolding;gbkey=misc_feature;locus_tag=GGE_0901 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 12655 13390 . - . ID=id-GGE_0901-2;Note=superfamily%3B label: Phage_GPO superfamily;gbkey=misc_feature;locus_tag=GGE_0901 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 12757 13258 . + . ID=id-AFQR01000017.1:12757..13258;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 12800 12809 . + . ID=id-AFQR01000017.1:12800..12809;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 13472 13517 . - . ID=id-AFQR01000017.1:13472..13517;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 13478 13502 . + . ID=id-AFQR01000017.1:13478..13502;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 13627 15408 . + . ID=gene-GGE_0902;Name=GGE_0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank CDS 13627 15408 . + 0 ID=cds-EGT82154.1;Parent=gene-GGE_0902;Dbxref=GeneID:145636853,InterPro:IPR004921,InterPro:IPR010332,PFAM:PF03237,PFAM:PF06056,NCBI_GP:EGT82154.1;Name=EGT82154.1;Note=ZP_01792518;Ontology_term=GO:0019069,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;go_process=viral capsid assembly|0019069||;locus_tag=GGE_0902;product=terminase%2C ATPase subunit;protein_id=EGT82154.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 13675 15358 . + . ID=id-GGE_0902;Note=multi-dom%3B label: P;gbkey=misc_feature;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 13675 13801 . + . ID=id-GGE_0902-2;Note=superfamily%3B label: Terminase_5 superfamily;gbkey=misc_feature;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 13675 13798 . + . ID=id-GGE_0902-3;Dbxref=InterPro:IPR010332,PFAM:PF06056;Note=terminase_5~atpase terminase subunit%2C putative;gbkey=misc_feature;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 14071 14884 . + . ID=id-GGE_0902-4;Note=superfamily%3B label: COG4373 superfamily;gbkey=misc_feature;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 14128 14842 . + . ID=id-GGE_0902-5;Dbxref=InterPro:IPR004921,PFAM:PF03237;Note=terminase_6~bacteriophage terminase%2C large subunit;gbkey=misc_feature;locus_tag=GGE_0902 GCA_000222085.2|AFQR01000017.1 Genbank gene 15418 16428 . + . ID=gene-GGE_0903;Name=GGE_0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0903 GCA_000222085.2|AFQR01000017.1 Genbank CDS 15418 16428 . + 0 ID=cds-EGT82155.1;Parent=gene-GGE_0903;Dbxref=GeneID:319775357,InterPro:IPR006430,InterPro:IPR006944,PFAM:PF04860,TIGRFAM:TIGR01540,NCBI_GP:EGT82155.1;Name=EGT82155.1;Note=YP_004137845;gbkey=CDS;locus_tag=GGE_0903;product=portal vertex protein;protein_id=EGT82155.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 15418 16426 . + . ID=id-GGE_0903;Note=superfamily%3B label: Phage_portal superfamily;gbkey=misc_feature;locus_tag=GGE_0903 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 15538 16306 . + . ID=id-GGE_0903-2;Dbxref=InterPro:IPR006944,PFAM:PF04860;Note=phage_portal~phage portal protein;gbkey=misc_feature;locus_tag=GGE_0903 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 15559 16267 . + . ID=id-GGE_0903-3;Dbxref=InterPro:IPR006430,TIGRFAM:TIGR01540;Note=multi-dom~portal_pbsx: phage portal protein%2C pbsx f~phage portal protein%2C pbsx%3B label: portal_PBSX;gbkey=misc_feature;locus_tag=GGE_0903 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 15441 15450 . - . ID=id-AFQR01000017.1:15441..15450;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 15669 15678 . - . ID=id-AFQR01000017.1:15669..15678;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 17105 18244 . + . ID=gene-GGE_0904;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=GGE_0904 GCA_000222085.2|AFQR01000017.1 Genbank CDS 17105 18244 . + 0 ID=cds-EGT82156.1;Parent=gene-GGE_0904;Dbxref=InterPro:IPR005338,PFAM:PF03702,NCBI_GP:EGT82156.1;Name=EGT82156.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;gene=anmK;go_function=ATP binding|0005524||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=amino sugar metabolic process|0006040||,peptidoglycan turnover|0009254||;locus_tag=GGE_0904;product=Anhydro-N-acetylmuramic acid kinase;protein_id=EGT82156.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 17111 17681 . + . ID=id-GGE_0904;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=anmK;locus_tag=GGE_0904 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 17117 18230 . + . ID=id-GGE_0904-2;Dbxref=InterPro:IPR005338,PFAM:PF03702;Note=superfamily~upf0075~anhydro-n-acetylmuramic acid kinase~HAMAP:MF_01270~anhmurnac_kinase~anhydro-n-acetylmuramic acid kinase%3B label: UPF0075 superfamily;gbkey=misc_feature;gene=anmK;locus_tag=GGE_0904 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 17117 18164 . + . ID=id-GGE_0904-3;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=anmK;locus_tag=GGE_0904 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 17144 17756 . - . ID=id-AFQR01000017.1:17144..17756;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 18254 19165 . + . ID=gene-GGE_0905;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank CDS 18254 19165 . + 0 ID=cds-EGT82157.1;Parent=gene-GGE_0905;Dbxref=GeneID:1175301,InterPro:IPR001347,InterPro:IPR005486,InterPro:IPR005488,PFAM:PF01380,TIGRFAM:TIGR00274,NCBI_GP:EGT82157.1;Name=EGT82157.1;Ontology_term=GO:0046348,GO:0005975,GO:0016835,GO:0005529;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||,sugar binding|0005529||;go_process=amino sugar catabolic process|0046348||,carbohydrate metabolic process|0005975||;locus_tag=GGE_0905;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=EGT82157.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18272 19004 . + . ID=id-GGE_0905;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18278 19142 . + . ID=id-GGE_0905-2;Note=multi-dom%3B label: murQ;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18278 19136 . + . ID=id-GGE_0905-3;Dbxref=InterPro:IPR005488;Note=HAMAP:MF_00068~murq~n-acetylmuramic acid 6-phosphate etherase;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18281 18998 . + . ID=id-GGE_0905-4;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18290 19130 . + . ID=id-GGE_0905-5;Note=HMMPanther:PTHR10088:SF2~n-acetylmuramic acid 6-phosphate etherase~HMMPanther:PTHR10088~glucokinase regulatory protein;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18290 19127 . + . ID=id-GGE_0905-6;Dbxref=InterPro:IPR005488,TIGRFAM:TIGR00274;Note=tigr00274: n-acetylmuramic acid 6-phosphate~n-acetylmuramic acid 6-phosphate etherase;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18314 19025 . + . ID=id-GGE_0905-7;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18437 18746 . + . ID=id-GGE_0905-8;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature;gene=murQ;locus_tag=GGE_0905 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18308 18827 . - . ID=id-AFQR01000017.1:18308..18827;Dbxref=InterPro:IPR005486;Note=PatternScan:PS01272~gckr~glucokinase regulatory%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 18506 18653 . - . ID=id-AFQR01000017.1:18506..18653;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 19195 20049 . - . ID=gene-GGE_0906;Name=GGE_0906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank CDS 19195 20049 . - 0 ID=cds-EGT82158.1;Parent=gene-GGE_0906;Dbxref=InterPro:IPR002509,InterPro:IPR006837,InterPro:IPR011330,PFAM:PF04748,NCBI_GP:EGT82158.1;Name=EGT82158.1;Note=HI_0755;Ontology_term=GO:0005975,GO:0003824,GO:0016810;gbkey=CDS;go_function=catalytic activity|0003824||,hydrolase activity acting on carbon-nitrogen (but not peptide) bonds|0016810||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0906;product=putative polysaccharide deacetylase;protein_id=EGT82158.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19282 19873 . - . ID=id-GGE_0906;Dbxref=InterPro:IPR002509;Note=Gene3D:3.20.20.370~polysaccharide deacetylase;gbkey=misc_feature;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19288 19846 . - . ID=id-GGE_0906-2;Dbxref=InterPro:IPR011330;Note=superfamily:SSF88713~glycoside hydrolase/deacetylase~glycoside hydrolase/deacetylase%2C beta/alpha-barrel;gbkey=misc_feature;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19294 19867 . - . ID=id-GGE_0906-3;Note=superfamily%3B label: Polysacc_deac_2 superfamily;gbkey=misc_feature;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19303 19831 . - . ID=id-GGE_0906-4;Dbxref=InterPro:IPR006837,PFAM:PF04748;Note=polysacc_deac_2~protein of unknown function duf610%2C yibq;gbkey=misc_feature;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20011 20020 . - . ID=id-GGE_0906-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0906 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19231 19378 . + . ID=id-AFQR01000017.1:19231..19378;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 19979 19988 . + . ID=id-AFQR01000017.1:19979..19988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 20037 21299 . - . ID=gene-GGE_0907;Name=GGE_0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0907 GCA_000222085.2|AFQR01000017.1 Genbank CDS 20037 21299 . - 0 ID=cds-EGT82159.1;Parent=gene-GGE_0907;Dbxref=InterPro:IPR011055,InterPro:IPR016047,PFAM:PF01551,NCBI_GP:EGT82159.1;Name=EGT82159.1;Note=HI_0756;gbkey=CDS;locus_tag=GGE_0907;product=putative peptidase M23;protein_id=EGT82159.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20094 21243 . - . ID=id-GGE_0907;Note=multi-dom%3B label: COG4942;gbkey=misc_feature;locus_tag=GGE_0907 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20097 20106 . - . ID=id-GGE_0907-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0907 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20658 20676 . - . ID=id-GGE_0907-3;Dbxref=InterPro:IPR011055;Note=superfamily:SSF51261~protein~protein;gbkey=misc_feature;locus_tag=GGE_0907 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20085 21015 . + . ID=id-AFQR01000017.1:20085..21015;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20088 20175 . + . ID=id-AFQR01000017.1:20088..20175;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20091 20343 . + . ID=id-AFQR01000017.1:20091..20343;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20100 20619 . + . ID=id-AFQR01000017.1:20100..20619;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20145 20316 . + . ID=id-AFQR01000017.1:20145..20316;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20166 20169 . + . ID=id-AFQR01000017.1:20166..20169;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20259 21063 . + . ID=id-AFQR01000017.1:20259..21063;Note=superfamily%3B label: Peptidase_M23 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20265 20631 . + . ID=id-AFQR01000017.1:20265..20631;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20319 21003 . + . ID=id-AFQR01000017.1:20319..21003;Dbxref=InterPro:IPR016047,PFAM:PF01551;Note=peptidase_m23~peptidase m23;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20337 21000 . + . ID=id-AFQR01000017.1:20337..21000;Note=HMMPanther:PTHR21666~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 20457 20877 . + . ID=id-AFQR01000017.1:20457..20877;Note=Gene3D:2.70.70.10;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21217 21226 . + . ID=id-AFQR01000017.1:21217..21226;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 21445 22128 . + . ID=gene-GGE_0908;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank CDS 21445 22128 . + 0 ID=cds-EGT82160.1;Parent=gene-GGE_0908;Dbxref=GeneID:166991325,InterPro:IPR005952,InterPro:IPR013078,PFAM:PF00300,TIGRFAM:TIGR01258,NCBI_GP:EGT82160.1;Name=EGT82160.1;Ontology_term=GO:0006096,GO:0016868;gbkey=CDS;gene=gpmA;go_function=intramolecular transferase activity phosphotransferases|0016868||;go_process=glycolysis|0006096||;locus_tag=GGE_0908;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=EGT82160.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21445 22126 . + . ID=id-GGE_0908;Dbxref=InterPro:IPR005952,TIGRFAM:TIGR01258;Note=superfamily:SSF53254~phosphoglycerate mutase-like~pgm_1: phosphoglycerate mutase~phosphoglycerate mutase 1~HAMAP:MF_01039~pgam_gpma~phosphoglycerate mutase 1;gbkey=misc_feature;gene=gpmA;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21445 22120 . + . ID=id-GGE_0908-2;Note=Gene3D:3.40.50.1240;gbkey=misc_feature;gene=gpmA;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21451 21700 . + . ID=id-GGE_0908-3;Note=specific~superfamily%3B label: HP superfamily;gbkey=misc_feature;gene=gpmA;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21454 22120 . + . ID=id-GGE_0908-4;Dbxref=InterPro:IPR005952;Note=HMMPanther:PTHR11931~family not named~phosphoglycerate mutase 1;gbkey=misc_feature;gene=gpmA;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21454 22003 . + . ID=id-GGE_0908-5;Dbxref=InterPro:IPR013078,PFAM:PF00300;Note=pgam~histidine phosphatase superfamily%2C clade-1;gbkey=misc_feature;gene=gpmA;locus_tag=GGE_0908 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21481 21550 . - . ID=id-AFQR01000017.1:21481..21550;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 21661 21913 . - . ID=id-AFQR01000017.1:21661..21913;Note=specific~superfamily%3B label: HP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22159 22168 . + . ID=id-AFQR01000017.1:22159..22168;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22177 22186 . - . ID=id-AFQR01000017.1:22177..22186;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22275 22314 . - . ID=id-AFQR01000017.1:22275..22314;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 22894 23106 . - . ID=gene-GGE_0909;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank CDS 22894 23106 . - 0 ID=cds-EGT82161.1;Parent=gene-GGE_0909;Dbxref=GeneID:1173025,InterPro:IPR002150,PFAM:PF01197,TIGRFAM:TIGR00105,NCBI_GP:EGT82161.1;Name=EGT82161.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmE;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0909;product=50S ribosomal protein L31;protein_id=EGT82161.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22894 23104 . - . ID=id-GGE_0909;Note=superfamily~superfamily:SSF143800~l28p-like%3B label: Ribosomal_L31 superfamily;gbkey=misc_feature;gene=rpmE;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22894 23098 . - . ID=id-GGE_0909-2;Dbxref=InterPro:IPR002150;Note=HAMAP:MF_00501~ribosomal_l31_1~ribosomal protein l31;gbkey=misc_feature;gene=rpmE;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22894 23095 . - . ID=id-GGE_0909-3;Dbxref=InterPro:IPR002150,TIGRFAM:TIGR00105;Note=l31: ribosomal protein l31~ribosomal protein l31;gbkey=misc_feature;gene=rpmE;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22894 23089 . - . ID=id-GGE_0909-4;Dbxref=InterPro:IPR002150,PFAM:PF01197;Note=ribosomal_l31~ribosomal protein l31;gbkey=misc_feature;gene=rpmE;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22900 22948 . - . ID=id-GGE_0909-5;Dbxref=InterPro:IPR002150;Note=FPrintScan:PR01249~ribosomall31~ribosomal protein l31;gbkey=misc_feature;gene=rpmE;locus_tag=GGE_0909 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22942 22987 . + . ID=id-AFQR01000017.1:22942..22987;Dbxref=InterPro:IPR002150;Note=FPrintScan:PR01249~ribosomall31~ribosomal protein l31;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22951 23032 . + . ID=id-AFQR01000017.1:22951..23032;Dbxref=InterPro:IPR002150;Note=FPrintScan:PR01249~ribosomall31~ribosomal protein l31;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 22960 22999 . + . ID=id-AFQR01000017.1:22960..22999;Dbxref=InterPro:IPR002150;Note=PatternScan:PS01143~ribosomal_l31~ribosomal protein l31;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23264 23273 . - . ID=id-AFQR01000017.1:23264..23273;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 23281 24417 . + . ID=gene-GGE_0910;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank CDS 23281 24417 . + 0 ID=cds-EGT82162.1;Parent=gene-GGE_0910;Dbxref=InterPro:IPR000086,InterPro:IPR003265,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005760,InterPro:IPR011257,InterPro:IPR015797,InterPro:IPR023170,PFAM:PF00730,TIGRFAM:TIGR01084,NCBI_GP:EGT82162.1;Name=EGT82162.1;Ontology_term=GO:0006281,GO:0006284,GO:0005622,GO:0019104,GO:0003824,GO:0004519,GO:0016787;gbkey=CDS;gene=mutY;go_component=intracellular|0005622||;go_function=DNA N-glycosylase activity|0019104||,catalytic activity|0003824||,endonuclease activity|0004519||,hydrolase activity|0016787||;go_process=DNA repair|0006281||,base-excision repair|0006284||;locus_tag=GGE_0910;product=A/G-specific adenine glycosylase;protein_id=EGT82162.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23299 23956 . + . ID=id-GGE_0910;Dbxref=InterPro:IPR011257;Note=superfamily:SSF48150~dna-glycosylase~dna glycosylase;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23311 24364 . + . ID=id-GGE_0910-2;Note=multi-dom%3B label: PRK10880;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23311 24103 . + . ID=id-GGE_0910-3;Dbxref=InterPro:IPR005760,TIGRFAM:TIGR01084;Note=muty: a/g-specific adenine glycosylase~a/g-specific adenine glycosylase muty%2C bacterial form;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23320 24067 . + . ID=id-GGE_0910-4;Note=HMMPanther:PTHR10359:SF1~a/g-specific adenine dna glycosylase~HMMPanther:PTHR10359~a/g-specific adenine glycosylase/endonuclease iii;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23362 23572 . + . ID=id-GGE_0910-5;Dbxref=InterPro:IPR011257;Note=Gene3D:1.10.340.30~dna glycosylase;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23389 23755 . + . ID=id-GGE_0910-6;Note=specific~superfamily%3B label: ENDO3c;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23404 23680 . + . ID=id-GGE_0910-7;Dbxref=InterPro:IPR003265,PFAM:PF00730;Note=hhh-gpd~hhh-gpd domain;gbkey=misc_feature;gene=mutY;locus_tag=GGE_0910 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23332 23872 . - . ID=id-AFQR01000017.1:23332..23872;Dbxref=InterPro:IPR004035;Note=PatternScan:PS00764~endonuclease_iii_1~endonuclease iii%2C iron-sulphur binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23344 23869 . - . ID=id-AFQR01000017.1:23344..23869;Note=superfamily%3B label: FES superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23371 23602 . - . ID=id-AFQR01000017.1:23371..23602;Dbxref=InterPro:IPR004036;Note=PatternScan:PS01155~endonuclease_iii_2~endonuclease iii%2C conserved site-2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23551 23986 . - . ID=id-AFQR01000017.1:23551..23986;Note=specific~superfamily%3B label: DNA_Glycosylase_C;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23608 23653 . - . ID=id-AFQR01000017.1:23608..23653;Dbxref=InterPro:IPR023170;Note=Gene3D:1.10.1670.10~helix-turn-helix%2C base-excision dna repair;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23683 23983 . - . ID=id-AFQR01000017.1:23683..23983;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 23719 23956 . - . ID=id-AFQR01000017.1:23719..23956;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 24395 24667 . + . ID=gene-GGE_0911;Name=GGE_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0911 GCA_000222085.2|AFQR01000017.1 Genbank CDS 24395 24667 . + 0 ID=cds-EGT82163.1;Parent=gene-GGE_0911;Dbxref=GeneID:1175302,InterPro:IPR007457,PFAM:PF04362,PIR:PIRSF029827,NCBI_GP:EGT82163.1;Name=EGT82163.1;Note=HI_0760;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||;locus_tag=GGE_0911;product=Putative Fe2+-trafficking protein;protein_id=EGT82163.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24395 24665 . + . ID=id-GGE_0911;Dbxref=InterPro:IPR007457,PIR:PIRSF029827;Note=superfamily:SSF111148~yggx-like~fe(ii) trafficking protein yggx~fe(ii) trafficking protein yggx~fe(ii) trafficking protein yggx;gbkey=misc_feature;locus_tag=GGE_0911 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24395 24662 . + . ID=id-GGE_0911-2;Note=superfamily%3B label: Iron_traffic superfamily;gbkey=misc_feature;locus_tag=GGE_0911 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24395 24659 . + . ID=id-GGE_0911-3;Dbxref=InterPro:IPR007457,PFAM:PF04362;Note=iron_traffic~fe(ii) trafficking protein yggx~HAMAP:MF_00686~fe_traffic_yggx~fe(ii) trafficking protein yggx;gbkey=misc_feature;locus_tag=GGE_0911 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24395 24623 . + . ID=id-GGE_0911-4;Dbxref=InterPro:IPR007457;Note=BlastProDom:PD029191~fetp_haein_p44048~fe(ii) trafficking protein yggx;gbkey=misc_feature;locus_tag=GGE_0911 GCA_000222085.2|AFQR01000017.1 Genbank gene 24682 25758 . + . ID=gene-GGE_0912;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank CDS 24682 25758 . + 0 ID=cds-EGT82164.1;Parent=gene-GGE_0912;Dbxref=GeneID:167011799,InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR023346,PFAM:PF01464,PFAM:PF11873,NCBI_GP:EGT82164.1;Name=EGT82164.1;Ontology_term=GO:0000270,GO:0016020,GO:0008933;gbkey=CDS;gene=mltC;go_component=membrane|0016020||;go_function=lytic transglycosylase activity|0008933||;go_process=peptidoglycan metabolic process|0000270||;locus_tag=GGE_0912;product=Membrane-bound lytic murein transglycosylase C;protein_id=EGT82164.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24682 25750 . + . ID=id-GGE_0912;Note=HAMAP:MF_01616~mltc;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24682 24730 . + . ID=id-GGE_0912-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24691 25243 . + . ID=id-GGE_0912-3;Dbxref=PFAM:PF11873;Note=duf3393;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24694 24718 . + . ID=id-GGE_0912-4;Note=seg;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24730 25708 . + . ID=id-GGE_0912-5;Note=multi-dom%3B label: mltC;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24733 25447 . + . ID=id-GGE_0912-6;Note=HMMPanther:PTHR21666:SF10~lytic transglycosylase~HMMPanther:PTHR21666~family not named;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24760 25174 . + . ID=id-GGE_0912-7;Note=superfamily%3B label: DUF3393 superfamily;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 25153 25279 . + . ID=id-GGE_0912-8;Note=Gene3D:1.10.530.10;gbkey=misc_feature;gene=mltC;locus_tag=GGE_0912 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 24769 25315 . - . ID=id-AFQR01000017.1:24769..25315;Dbxref=InterPro:IPR000189;Note=PatternScan:PS00922~transglycosylase~prokaryotic transglycosylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 25057 25300 . - . ID=id-AFQR01000017.1:25057..25300;Note=specific~superfamily%3B label: LT_GEWL;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 25060 25261 . - . ID=id-AFQR01000017.1:25060..25261;Dbxref=InterPro:IPR008258,PFAM:PF01464;Note=slt~lytic transglycosylase-like%2C catalytic;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 25192 25246 . - . ID=id-AFQR01000017.1:25192..25246;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 27076 27483 . + . ID=gene-GGE_0913;Name=GGE_0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0913 GCA_000222085.2|AFQR01000017.1 Genbank CDS 27076 27483 . + 0 ID=cds-EGT82165.1;Parent=gene-GGE_0913;Dbxref=GeneID:190150091,InterPro:IPR009312,PFAM:PF06141,NCBI_GP:EGT82165.1;Name=EGT82165.1;Note=YP_001968616;gbkey=CDS;locus_tag=GGE_0913;product=Minor tail protein U;protein_id=EGT82165.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27076 27463 . + . ID=id-GGE_0913;Dbxref=InterPro:IPR009312,PFAM:PF06141;Note=phage_tail_u~phage minor tail u;gbkey=misc_feature;locus_tag=GGE_0913 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27085 27460 . + . ID=id-GGE_0913-2;Note=superfamily:SSF143749~phage tail like protein;gbkey=misc_feature;locus_tag=GGE_0913 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27085 27457 . + . ID=id-GGE_0913-3;Note=superfamily%3B label: Phage_tail_U superfamily;gbkey=misc_feature;locus_tag=GGE_0913 GCA_000222085.2|AFQR01000017.1 Genbank gene 27498 28688 . + . ID=gene-GGE_0914;Name=GGE_0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank CDS 27498 28688 . + 0 ID=cds-EGT82166.1;Parent=gene-GGE_0914;Dbxref=GeneID:145632710,InterPro:IPR006444,PFAM:PF05065,TIGRFAM:TIGR01554,NCBI_GP:EGT82166.1;Name=EGT82166.1;Note=ZP_01788444;gbkey=CDS;locus_tag=GGE_0914;product=putative major head protein;protein_id=EGT82166.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27510 28668 . + . ID=id-GGE_0914;Note=multi-dom%3B label: COG4653;gbkey=misc_feature;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27513 28668 . + . ID=id-GGE_0914-2;Dbxref=InterPro:IPR006444,TIGRFAM:TIGR01554;Note=major_cap_hk97: phage major capsid pro~bacteriophage hk97%2C major capsid protein;gbkey=misc_feature;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27513 27597 . + . ID=id-GGE_0914-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27798 28389 . + . ID=id-GGE_0914-4;Note=superfamily:SSF56563~major capsid protein gp5;gbkey=misc_feature;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27822 28356 . + . ID=id-GGE_0914-5;Dbxref=PFAM:PF05065;Note=superfamily~phage_capsid%3B label: Phage_capsid superfamily;gbkey=misc_feature;locus_tag=GGE_0914 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27537 28119 . - . ID=id-AFQR01000017.1:27537..28119;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 27564 27642 . - . ID=id-AFQR01000017.1:27564..27642;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 28733 29299 . + . ID=gene-GGE_0915;Name=GGE_0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0915 GCA_000222085.2|AFQR01000017.1 Genbank CDS 28733 29299 . + 0 ID=cds-EGT82167.1;Parent=gene-GGE_0915;Dbxref=GeneID:145632709,InterPro:IPR006433,PFAM:PF04586,TIGRFAM:TIGR01543,NCBI_GP:EGT82167.1;Name=EGT82167.1;Note=ZP_01788443;gbkey=CDS;locus_tag=GGE_0915;product=putative prohead protease;protein_id=EGT82167.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 28742 29231 . + . ID=id-GGE_0915;Note=superfamily%3B label: Peptidase_U35 superfamily;gbkey=misc_feature;locus_tag=GGE_0915 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 28745 29228 . + . ID=id-GGE_0915-2;Dbxref=InterPro:IPR006433,PFAM:PF04586;Note=peptidase_u35~peptidase u35%2C phage prohead hk97;gbkey=misc_feature;locus_tag=GGE_0915 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 28790 29174 . + . ID=id-GGE_0915-3;Dbxref=InterPro:IPR006433,TIGRFAM:TIGR01543;Note=proheadase_hk97: phage prohead protea~peptidase u35%2C phage prohead hk97;gbkey=misc_feature;locus_tag=GGE_0915 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 29257 29266 . - . ID=id-AFQR01000017.1:29257..29266;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 29301 30533 . + . ID=gene-GGE_0916;Name=GGE_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0916 GCA_000222085.2|AFQR01000017.1 Genbank CDS 29301 30533 . + 0 ID=cds-EGT82168.1;Parent=gene-GGE_0916;Dbxref=GeneID:145632708,InterPro:IPR006427,InterPro:IPR006944,PFAM:PF04860,TIGRFAM:TIGR01537,NCBI_GP:EGT82168.1;Name=EGT82168.1;Note=ZP_01788442;gbkey=CDS;locus_tag=GGE_0916;product=putative head portal protein;protein_id=EGT82168.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 29388 30339 . + . ID=id-GGE_0916;Note=superfamily%3B label: Phage_portal superfamily;gbkey=misc_feature;locus_tag=GGE_0916 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 29394 30333 . + . ID=id-GGE_0916-2;Dbxref=InterPro:IPR006944,PFAM:PF04860;Note=phage_portal~phage portal protein;gbkey=misc_feature;locus_tag=GGE_0916 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 29406 30339 . + . ID=id-GGE_0916-3;Dbxref=InterPro:IPR006427,TIGRFAM:TIGR01537;Note=multi-dom~portal_hk97: phage portal protein%2C hk97 f~phage portal protein%2C hk97%3B label: portal_HK97;gbkey=misc_feature;locus_tag=GGE_0916 GCA_000222085.2|AFQR01000017.1 Genbank gene 30517 30741 . + . ID=gene-GGE_0917;Name=GGE_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0917 GCA_000222085.2|AFQR01000017.1 Genbank CDS 30517 30741 . + 0 ID=cds-EGT82169.1;Parent=gene-GGE_0917;Dbxref=InterPro:IPR008767,PFAM:PF05521,NCBI_GP:EGT82169.1;Name=EGT82169.1;Note=Hypothetical phage head-tail joining protein;gbkey=CDS;locus_tag=GGE_0917;product=putative phage head-tail joining protein;protein_id=EGT82169.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30550 30679 . + . ID=id-GGE_0917;Dbxref=InterPro:IPR008767,PFAM:PF05521;Note=phage_h_t_join~phage head-tail joining protein;gbkey=misc_feature;locus_tag=GGE_0917 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30550 30661 . + . ID=id-GGE_0917-2;Note=superfamily%3B label: Phage_H_T_join superfamily;gbkey=misc_feature;locus_tag=GGE_0917 GCA_000222085.2|AFQR01000017.1 Genbank gene 30861 31175 . + . ID=gene-GGE_0918;Name=GGE_0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0918 GCA_000222085.2|AFQR01000017.1 Genbank CDS 30861 31175 . + 0 ID=cds-EGT82170.1;Parent=gene-GGE_0918;Dbxref=GeneID:145632706,InterPro:IPR006450,InterPro:IPR021146,PFAM:PF05135,TIGRFAM:TIGR01560,NCBI_GP:EGT82170.1;Name=EGT82170.1;Note=ZP_01788440;gbkey=CDS;locus_tag=GGE_0918;product=putative bacteriophage QLRG family%2C putative DNA packaging;protein_id=EGT82170.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30876 31146 . + . ID=id-GGE_0918;Dbxref=InterPro:IPR021146,PFAM:PF05135;Note=phage_qlrg~bacteriophage qlrg family%2C putative dna packaging;gbkey=misc_feature;locus_tag=GGE_0918 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30882 31152 . + . ID=id-GGE_0918-2;Dbxref=InterPro:IPR006450,TIGRFAM:TIGR01560;Note=put_dna_pack: uncharacterized phage prot~bacteriophage hk022%2C gp6;gbkey=misc_feature;locus_tag=GGE_0918 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30882 31140 . + . ID=id-GGE_0918-3;Note=specific~superfamily%3B label: gp6;gbkey=misc_feature;locus_tag=GGE_0918 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 30900 30903 . + . ID=id-GGE_0918-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_0918 GCA_000222085.2|AFQR01000017.1 Genbank gene 31993 32367 . + . ID=gene-GGE_0919;Name=GGE_0919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0919 GCA_000222085.2|AFQR01000017.1 Genbank CDS 31993 32367 . + 0 ID=cds-EGT82171.1;Parent=gene-GGE_0919;Dbxref=GeneID:145632704,InterPro:IPR006448,PFAM:PF05119,TIGRFAM:TIGR01558,NCBI_GP:EGT82171.1;Name=EGT82171.1;Note=ZP_01788438;gbkey=CDS;locus_tag=GGE_0919;product=putative terminase small subunit;protein_id=EGT82171.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32023 32338 . + . ID=id-GGE_0919;Dbxref=InterPro:IPR006448,TIGRFAM:TIGR01558;Note=sm_term_p27: putative phage terminase%2C sm~phage terminase%2C small subunit%2C putative%2C p27;gbkey=misc_feature;locus_tag=GGE_0919 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32026 32323 . + . ID=id-GGE_0919-2;Note=superfamily%3B label: Terminase_4 superfamily;gbkey=misc_feature;locus_tag=GGE_0919 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32050 32272 . + . ID=id-GGE_0919-3;Dbxref=PFAM:PF05119;Note=terminase_4;gbkey=misc_feature;locus_tag=GGE_0919 GCA_000222085.2|AFQR01000017.1 Genbank gene 32348 34042 . + . ID=gene-GGE_0920;Name=GGE_0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank CDS 32348 34042 . + 0 ID=cds-EGT82172.1;Parent=gene-GGE_0920;Dbxref=GeneID:145632703,InterPro:IPR005021,PFAM:PF03354,NCBI_GP:EGT82172.1;Name=EGT82172.1;Note=ZP_01788437;gbkey=CDS;locus_tag=GGE_0920;product=putative terminase of prophage;protein_id=EGT82172.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32396 33938 . + . ID=id-GGE_0920;Note=multi-dom%3B label: COG4626;gbkey=misc_feature;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32498 32507 . + . ID=id-GGE_0920-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32588 33716 . + . ID=id-GGE_0920-3;Dbxref=InterPro:IPR005021,PFAM:PF03354;Note=terminase_1~phage terminase;gbkey=misc_feature;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32591 33620 . + . ID=id-GGE_0920-4;Note=superfamily%3B label: Terminase_1 superfamily;gbkey=misc_feature;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 33478 33487 . + . ID=id-GGE_0920-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0920 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32390 33416 . - . ID=id-AFQR01000017.1:32390..33416;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 32408 33872 . - . ID=id-AFQR01000017.1:32408..33872;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 34053 34508 . + . ID=gene-GGE_0921;Name=GGE_0921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0921 GCA_000222085.2|AFQR01000017.1 Genbank CDS 34053 34508 . + 0 ID=cds-EGT82173.1;Parent=gene-GGE_0921;Dbxref=GeneID:190150083,InterPro:IPR006967,InterPro:IPR010064,PFAM:PF04883,TIGRFAM:TIGR01725,NCBI_GP:EGT82173.1;Name=EGT82173.1;Note=YP_001968608;gbkey=CDS;locus_tag=GGE_0921;product=putative phage protein%2C HK97%2C gp10;protein_id=EGT82173.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 34068 34485 . + . ID=id-GGE_0921;Dbxref=InterPro:IPR010064,TIGRFAM:TIGR01725;Note=phge_hk97_gp10: phage protein%2C hk97 gp~phage protein%2C hk97%2C gp10;gbkey=misc_feature;locus_tag=GGE_0921 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 34107 34413 . + . ID=id-GGE_0921-2;Note=superfamily%3B label: DUF646 superfamily;gbkey=misc_feature;locus_tag=GGE_0921 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 34122 34395 . + . ID=id-GGE_0921-3;Dbxref=InterPro:IPR006967,PFAM:PF04883;Note=duf646~protein of unknown function duf646%2C phage head/tail component;gbkey=misc_feature;locus_tag=GGE_0921 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 34862 35288 . - . ID=id-AFQR01000017.1:34862..35288;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 34987 34996 . - . ID=id-AFQR01000017.1:34987..34996;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 35446 35649 . + . ID=gene-GGE_0922;Name=GGE_0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0922 GCA_000222085.2|AFQR01000017.1 Genbank CDS 35446 35649 . + 0 ID=cds-EGT82174.1;Parent=gene-GGE_0922;Dbxref=GeneID:145632699,InterPro:IPR010260,PFAM:PF05930,NCBI_GP:EGT82174.1;Name=EGT82174.1;Note=ZP_01788433;gbkey=CDS;locus_tag=GGE_0922;product=putative prophage CP4-57 regulatory;protein_id=EGT82174.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 35458 35635 . + . ID=id-GGE_0922;Note=superfamily%3B label: Phage_AlpA superfamily;gbkey=misc_feature;locus_tag=GGE_0922 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 35479 35593 . + . ID=id-GGE_0922-2;Dbxref=InterPro:IPR010260,PFAM:PF05930;Note=phage_alpa~prophage cp4-57 regulatory;gbkey=misc_feature;locus_tag=GGE_0922 GCA_000222085.2|AFQR01000017.1 Genbank gene 35744 37201 . + . ID=gene-GGE_0923;Name=GGE_0923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0923 GCA_000222085.2|AFQR01000017.1 Genbank CDS 35744 37201 . + 0 ID=cds-EGT82175.1;Parent=gene-GGE_0923;Dbxref=InterPro:IPR018880,PFAM:PF10554,NCBI_GP:EGT82175.1;Name=EGT82175.1;Note=Hypothetical phage P4 Ash-like protein;gbkey=CDS;locus_tag=GGE_0923;product=putative phage P4 Ash-like protein;protein_id=EGT82175.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 35795 35804 . + . ID=id-GGE_0923;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0923 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 36038 36347 . - . ID=id-AFQR01000017.1:36038..36347;Dbxref=InterPro:IPR018880,PFAM:PF10554;Note=phage_ash~phage p4%2C ash protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 36053 36332 . - . ID=id-AFQR01000017.1:36053..36332;Note=superfamily%3B label: Phage_ASH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 36788 36797 . - . ID=id-AFQR01000017.1:36788..36797;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 37136 37145 . - . ID=id-AFQR01000017.1:37136..37145;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 37435 37635 . + . ID=gene-GGE_0924;Name=GGE_0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0924 GCA_000222085.2|AFQR01000017.1 Genbank CDS 37435 37635 . + 0 ID=cds-EGT82176.1;Parent=gene-GGE_0924;Dbxref=GeneID:145632696,NCBI_GP:EGT82176.1;Name=EGT82176.1;Note=ZP_01788430~CGSHi3655_02739;gbkey=CDS;locus_tag=GGE_0924;product=Hypothetical protein;protein_id=EGT82176.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank gene 37625 37831 . + . ID=gene-GGE_0925;Name=GGE_0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0925 GCA_000222085.2|AFQR01000017.1 Genbank CDS 37625 37831 . + 0 ID=cds-EGT82177.1;Parent=gene-GGE_0925;Dbxref=GeneID:145632695,NCBI_GP:EGT82177.1;Name=EGT82177.1;Note=ZP_01788429~CGSHi3655_02734;gbkey=CDS;locus_tag=GGE_0925;product=Hypothetical protein;protein_id=EGT82177.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank gene 37722 38375 . + . ID=gene-GGE_0926;Name=GGE_0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0926 GCA_000222085.2|AFQR01000017.1 Genbank CDS 37722 38375 . + 0 ID=cds-EGT82178.1;Parent=gene-GGE_0926;Dbxref=GeneID:145632694,NCBI_GP:EGT82178.1;Name=EGT82178.1;Note=ZP_01788428~CGSHi3655_02729;gbkey=CDS;locus_tag=GGE_0926;product=Hypothetical protein;protein_id=EGT82178.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 37920 37929 . + . ID=id-GGE_0926;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0926 GCA_000222085.2|AFQR01000017.1 Genbank gene 38368 38760 . + . ID=gene-GGE_0927;Name=GGE_0927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0927 GCA_000222085.2|AFQR01000017.1 Genbank CDS 38368 38760 . + 0 ID=cds-EGT82179.1;Parent=gene-GGE_0927;Dbxref=GeneID:145641960,NCBI_GP:EGT82179.1;Name=EGT82179.1;Note=ZP_01797533~CGSHiR3021_02703;gbkey=CDS;locus_tag=GGE_0927;product=Hypothetical protein;protein_id=EGT82179.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 38413 38587 . - . ID=id-AFQR01000017.1:38413..38587;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 38748 40517 . + . ID=gene-GGE_0928;Name=GGE_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0928 GCA_000222085.2|AFQR01000017.1 Genbank CDS 38748 40517 . + 0 ID=cds-EGT82180.1;Parent=gene-GGE_0928;Dbxref=GeneID:145632692,InterPro:IPR004968,InterPro:IPR006500,InterPro:IPR011991,InterPro:IPR014015,InterPro:IPR014818,PFAM:PF03288,PFAM:PF08706,TIGRFAM:TIGR01613,NCBI_GP:EGT82180.1;Name=EGT82180.1;Note=ZP_01788426;gbkey=CDS;locus_tag=GGE_0928;product=phage DNA primase-like protein;protein_id=EGT82180.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39453 39681 . + . ID=id-GGE_0928;Dbxref=InterPro:IPR006500,TIGRFAM:TIGR01613;Note=primase_cterm: phage/plasmid primase%2C p~dna primase%2C phage/plasmid;gbkey=misc_feature;locus_tag=GGE_0928 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39471 39663 . + . ID=id-GGE_0928-2;Note=superfamily%3B label: primase_Cterm superfamily;gbkey=misc_feature;locus_tag=GGE_0928 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39027 40215 . - . ID=id-AFQR01000017.1:39027..40215;Dbxref=InterPro:IPR004968,PFAM:PF03288;Note=pox_d5~dna primase/nucleoside triphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39042 40215 . - . ID=id-AFQR01000017.1:39042..40215;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39051 40212 . - . ID=id-AFQR01000017.1:39051..40212;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39117 39234 . - . ID=id-AFQR01000017.1:39117..39234;Dbxref=InterPro:IPR014818,PFAM:PF08706;Note=d5_n~phage/plasmid primase%2C p4;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39129 39225 . - . ID=id-AFQR01000017.1:39129..39225;Note=superfamily%3B label: D5_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39210 39621 . - . ID=id-AFQR01000017.1:39210..39621;Dbxref=InterPro:IPR014015;Note=ProfileScan:PS51206~sf3_helicase_1~helicase%2C superfamily 3%2C dna virus;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39264 39558 . - . ID=id-AFQR01000017.1:39264..39558;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39384 39504 . - . ID=id-AFQR01000017.1:39384..39504;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 39571 39580 . - . ID=id-AFQR01000017.1:39571..39580;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 40689 41915 . - . ID=gene-GGE_0929;Name=GGE_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0929 GCA_000222085.2|AFQR01000017.1 Genbank CDS 40689 41915 . - 0 ID=cds-EGT82181.1;Parent=gene-GGE_0929;Dbxref=GeneID:145632691,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,PFAM:PF00589,NCBI_GP:EGT82181.1;Name=EGT82181.1;Note=ZP_01788425;Ontology_term=GO:0015074,GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||;locus_tag=GGE_0929;product=phage integrase;protein_id=EGT82181.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 40689 41883 . - . ID=id-GGE_0929;Note=multi-dom%3B label: PRK09692;gbkey=misc_feature;locus_tag=GGE_0929 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 40818 41754 . - . ID=id-GGE_0929-2;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;locus_tag=GGE_0929 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 40743 40764 . + . ID=id-AFQR01000017.1:40743..40764;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 40977 41007 . + . ID=id-AFQR01000017.1:40977..41007;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 41148 41334 . + . ID=id-AFQR01000017.1:41148..41334;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 41199 41334 . + . ID=id-AFQR01000017.1:41199..41334;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 41235 41325 . + . ID=id-AFQR01000017.1:41235..41325;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 42213 42554 . - . ID=gene-GGE_0930;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank CDS 42213 42554 . - 0 ID=cds-EGT82182.1;Parent=gene-GGE_0930;Dbxref=GeneID:1173417,InterPro:IPR004692,PFAM:PF03840,TIGRFAM:TIGR00810,NCBI_GP:EGT82182.1;Name=EGT82182.1;Ontology_term=GO:0009306,GO:0016021,GO:0015450;gbkey=CDS;gene=secG;go_component=integral to membrane|0016021||;go_function=P-P-bond-hydrolysis-driven protein transmembrane transporter activity|0015450||;go_process=protein secretion|0009306||;locus_tag=GGE_0930;product=Protein-export membrane protein secG;protein_id=EGT82182.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42213 42441 . - . ID=id-GGE_0930;Note=superfamily%3B label: SecG superfamily;gbkey=misc_feature;gene=secG;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42219 42435 . - . ID=id-GGE_0930-2;Dbxref=InterPro:IPR004692,PFAM:PF03840;Note=secg~preprotein translocase secg subunit;gbkey=misc_feature;gene=secG;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42219 42432 . - . ID=id-GGE_0930-3;Dbxref=InterPro:IPR004692,TIGRFAM:TIGR00810;Note=secg: preprotein translocase%2C secg subunit~preprotein translocase secg subunit;gbkey=misc_feature;gene=secG;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42222 42276 . - . ID=id-GGE_0930-4;Dbxref=InterPro:IPR004692;Note=FPrintScan:PR01651~secgexport~preprotein translocase secg subunit;gbkey=misc_feature;gene=secG;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42228 42267 . - . ID=id-GGE_0930-5;Note=transmembrane_regions;gbkey=misc_feature;gene=secG;locus_tag=GGE_0930 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42255 42483 . + . ID=id-AFQR01000017.1:42255..42483;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42258 42282 . + . ID=id-AFQR01000017.1:42258..42282;Dbxref=InterPro:IPR004692;Note=FPrintScan:PR01651~secgexport~preprotein translocase secg subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42264 42327 . + . ID=id-AFQR01000017.1:42264..42327;Dbxref=InterPro:IPR004692;Note=FPrintScan:PR01651~secgexport~preprotein translocase secg subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42282 42375 . + . ID=id-AFQR01000017.1:42282..42375;Dbxref=InterPro:IPR004692;Note=FPrintScan:PR01651~secgexport~preprotein translocase secg subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42282 42366 . + . ID=id-AFQR01000017.1:42282..42366;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42288 42288 . + . ID=id-AFQR01000017.1:42288..42288;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 42663 44618 . - . ID=gene-GGE_0931;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank CDS 42663 44618 . - 0 ID=cds-EGT82183.1;Parent=gene-GGE_0931;Dbxref=GeneID:1174743,InterPro:IPR000380,InterPro:IPR005738,InterPro:IPR006171,InterPro:IPR013497,InterPro:IPR013824,InterPro:IPR013825,InterPro:IPR023405,InterPro:IPR023406,PFAM:PF01131,PFAM:PF01751,TIGRFAM:TIGR01056,NCBI_GP:EGT82183.1;Name=EGT82183.1;Ontology_term=GO:0006265,GO:0006268,GO:0005694,GO:0003677,GO:0003916,GO:0003917;gbkey=CDS;gene=topB;go_component=chromosome|0005694||;go_function=DNA binding|0003677||,DNA topoisomerase activity|0003916||,DNA topoisomerase type I activity|0003917||;go_process=DNA topological change|0006265||,DNA unwinding involved in replication|0006268||;locus_tag=GGE_0931;product=DNA topoisomerase 3;protein_id=EGT82183.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 44616 . - . ID=id-GGE_0931;Dbxref=InterPro:IPR005738,TIGRFAM:TIGR01056;Note=topb: dna topoisomerase iii~dna topoisomerase iii%2C bacterial-type;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 44517 . - . ID=id-GGE_0931-2;Dbxref=InterPro:IPR023405;Note=superfamily:SSF56712~prokaryotic type i dna topoisomerase~dna topoisomerase%2C type ia%2C core domain;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 44499 . - . ID=id-GGE_0931-3;Note=multi-dom%3B label: topB;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 44484 . - . ID=id-GGE_0931-4;Dbxref=InterPro:IPR000380;Note=HMMPanther:PTHR11390~family not named~dna topoisomerase%2C type ia;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 43122 . - . ID=id-GGE_0931-5;Note=Gene3D:3.40.50.140;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42663 43110 . - . ID=id-GGE_0931-6;Note=specific~superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42669 43029 . - . ID=id-GGE_0931-7;Dbxref=InterPro:IPR006171,PFAM:PF01751;Note=toprim~toprim domain;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42699 42708 . - . ID=id-GGE_0931-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 43128 44004 . - . ID=id-GGE_0931-9;Dbxref=InterPro:IPR013497,PFAM:PF01131;Note=topoisom_bac~dna topoisomerase%2C type ia%2C central;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 43131 44034 . - . ID=id-GGE_0931-10;Note=specific~superfamily%3B label: TOP1Ac;gbkey=misc_feature;gene=topB;locus_tag=GGE_0931 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42693 43659 . + . ID=id-AFQR01000017.1:42693..43659;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42699 44568 . + . ID=id-AFQR01000017.1:42699..44568;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42705 42957 . + . ID=id-AFQR01000017.1:42705..42957;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42708 44253 . + . ID=id-AFQR01000017.1:42708..44253;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42711 43641 . + . ID=id-AFQR01000017.1:42711..43641;Dbxref=InterPro:IPR023406;Note=PatternScan:PS00396~topoisomerase_i_prok~dna topoisomerase%2C type ia%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42714 43899 . + . ID=id-AFQR01000017.1:42714..43899;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42720 43242 . + . ID=id-AFQR01000017.1:42720..43242;Dbxref=InterPro:IPR000380;Note=FPrintScan:PR00417~prtpismrasei~dna topoisomerase%2C type ia;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42873 43320 . + . ID=id-AFQR01000017.1:42873..43320;Dbxref=InterPro:IPR013825;Note=Gene3D:2.70.20.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 42918 43878 . + . ID=id-AFQR01000017.1:42918..43878;Dbxref=InterPro:IPR013825;Note=Gene3D:2.70.20.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 43032 44133 . + . ID=id-AFQR01000017.1:43032..44133;Dbxref=InterPro:IPR013824;Note=Gene3D:1.10.460.10~dna topoisomerase%2C type ia%2C central region%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 43885 43894 . + . ID=id-AFQR01000017.1:43885..43894;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 44634 45236 . - . ID=gene-GGE_0932;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank CDS 44634 45236 . - 0 ID=cds-EGT82184.1;Parent=gene-GGE_0932;Dbxref=GeneID:1172899,InterPro:IPR000093,InterPro:IPR006171,InterPro:IPR015967,PFAM:PF01751,PFAM:PF02132,TIGRFAM:TIGR00615,NCBI_GP:EGT82184.1;Name=EGT82184.1;Ontology_term=GO:0006310,GO:0006281,GO:0003677;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||;go_process=DNA recombination|0006310||,DNA repair|0006281||;locus_tag=GGE_0932;product=Recombination protein recR;protein_id=EGT82184.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44634 45231 . - . ID=id-GGE_0932;Dbxref=InterPro:IPR000093;Note=superfamily:SSF111304~recombination protein recr~recr protein~HAMAP:MF_00017~recr~recr protein;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44634 45225 . - . ID=id-GGE_0932-2;Dbxref=InterPro:IPR000093,TIGRFAM:TIGR00615;Note=recr: recombination protein recr~recr protein;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44640 45228 . - . ID=id-GGE_0932-3;Note=multi-dom%3B label: recR;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44748 44757 . - . ID=id-GGE_0932-4;Note=superfamily%3B label: RecR superfamily;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44751 44754 . - . ID=id-GGE_0932-5;Dbxref=InterPro:IPR015967,PFAM:PF02132;Note=recr~zinc finger c4-type%2C recr;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44877 44970 . - . ID=id-GGE_0932-6;Note=specific~superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44883 44907 . - . ID=id-GGE_0932-7;Dbxref=InterPro:IPR006171,PFAM:PF01751;Note=toprim~toprim domain;gbkey=misc_feature;gene=recR;locus_tag=GGE_0932 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 44700 44805 . + . ID=id-AFQR01000017.1:44700..44805;Dbxref=InterPro:IPR015967;Note=PatternScan:PS01300~recr~zinc finger c4-type%2C recr;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 45299 45628 . - . ID=gene-GGE_0933;Name=GGE_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank CDS 45299 45628 . - 0 ID=cds-EGT82185.1;Parent=gene-GGE_0933;Dbxref=GeneID:1175545,InterPro:IPR004401,PFAM:PF02575,PIR:PIRSF004555,TIGRFAM:TIGR00103,NCBI_GP:EGT82185.1;Name=EGT82185.1;Note=HI_0442;gbkey=CDS;locus_tag=GGE_0933;product=UPF0133 protein;protein_id=EGT82185.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45299 45626 . - . ID=id-GGE_0933;Dbxref=InterPro:IPR004401;Note=Gene3D:3.30.1310.10~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45299 45614 . - . ID=id-GGE_0933-2;Dbxref=InterPro:IPR004401,TIGRFAM:TIGR00103;Note=dna_ybab_ebfc: dna-binding protein%2C yba~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45308 45374 . - . ID=id-GGE_0933-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45317 45611 . - . ID=id-GGE_0933-4;Dbxref=InterPro:IPR004401,PIR:PIRSF004555;Note=uncharacterised conserved protein%2C ucp004555 type~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45317 45581 . - . ID=id-GGE_0933-5;Dbxref=InterPro:IPR004401;Note=HAMAP:MF_00274~upf0133~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45320 45386 . - . ID=id-GGE_0933-6;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45332 45581 . - . ID=id-GGE_0933-7;Dbxref=InterPro:IPR004401;Note=superfamily:SSF82607~ybab-like~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45332 45575 . - . ID=id-GGE_0933-8;Dbxref=InterPro:IPR004401,PFAM:PF02575;Note=duf149~uncharacterised protein family upf0133;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45389 45527 . - . ID=id-GGE_0933-9;Note=superfamily%3B label: DUF149 superfamily;gbkey=misc_feature;locus_tag=GGE_0933 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45736 45745 . - . ID=id-AFQR01000017.1:45736..45745;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 45797 46642 . - . ID=gene-GGE_0934;Name=GGE_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0934 GCA_000222085.2|AFQR01000017.1 Genbank CDS 45797 46642 . - 0 ID=cds-EGT82186.1;Parent=gene-GGE_0934;Dbxref=GeneID:401675,InterPro:IPR007473,PFAM:PF04378,NCBI_GP:EGT82186.1;Name=EGT82186.1;Note=HI_0441;gbkey=CDS;locus_tag=GGE_0934;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT82186.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45797 46637 . - . ID=id-GGE_0934;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0934 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45803 46637 . - . ID=id-GGE_0934-2;Note=superfamily%3B label: DUF519 superfamily;gbkey=misc_feature;locus_tag=GGE_0934 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 45896 46538 . - . ID=id-GGE_0934-3;Dbxref=InterPro:IPR007473,PFAM:PF04378;Note=duf519~protein of unknown function duf519;gbkey=misc_feature;locus_tag=GGE_0934 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46040 46145 . - . ID=id-GGE_0934-4;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0934 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46700 46709 . + . ID=id-AFQR01000017.1:46700..46709;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 46716 49316 . - . ID=gene-GGE_0935;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank CDS 46716 49316 . - 0 ID=cds-EGT82187.1;Parent=gene-GGE_0935;Dbxref=GeneID:1172033,InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011816,InterPro:IPR012338,PFAM:PF00905,PFAM:PF00912,TIGRFAM:TIGR02074,NCBI_GP:EGT82187.1;Name=EGT82187.1;Ontology_term=GO:0009252,GO:0009273,GO:0046677,GO:0009274,GO:0003824,GO:0008658,GO:0008233,GO:0016763;gbkey=CDS;gene=mrcA;go_component=peptidoglycan-based cell wall|0009274||;go_function=catalytic activity|0003824||,penicillin binding|0008658||,peptidase activity|0008233||,transferase activity transferring pentosyl groups|0016763||;go_process=peptidoglycan biosynthetic process|0009252||,peptidoglycan-based cell wall biogenesis|0009273||,response to antibiotic|0046677||;locus_tag=GGE_0935;product=Penicillin-binding protein 1A;protein_id=EGT82187.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46716 49314 . - . ID=id-GGE_0935;Note=multi-dom%3B label: mrcA;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46716 46833 . - . ID=id-GGE_0935-2;Note=HMMPanther:PTHR22909:SF4~subfamily not named~HMMPanther:PTHR22909~family not named;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46737 46785 . - . ID=id-GGE_0935-3;Note=transmembrane_regions;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46878 47247 . - . ID=id-GGE_0935-4;Note=superfamily%3B label: Transgly superfamily;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46878 47244 . - . ID=id-GGE_0935-5;Dbxref=InterPro:IPR001264,PFAM:PF00912;Note=transgly~glycosyl transferase%2C family 51;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 46911 48882 . - . ID=id-GGE_0935-6;Dbxref=InterPro:IPR011816,TIGRFAM:TIGR02074;Note=pbp_1a_fam: penicillin-binding protein%2C 1a~penicillin-binding protein 1a;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 47349 48669 . - . ID=id-GGE_0935-7;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=mrcA;locus_tag=GGE_0935 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 47043 48759 . + . ID=id-AFQR01000017.1:47043..48759;Note=Gene3D:3.40.710.10;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 47220 47961 . + . ID=id-AFQR01000017.1:47220..47961;Note=superfamily%3B label: Transpeptidase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 47241 47961 . + . ID=id-AFQR01000017.1:47241..47961;Dbxref=InterPro:IPR001460,PFAM:PF00905;Note=transpeptidase~penicillin-binding protein%2C transpeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 49415 50212 . + . ID=gene-GGE_0936;Name=comA;gbkey=Gene;gene=comA;gene_biotype=protein_coding;locus_tag=GGE_0936 GCA_000222085.2|AFQR01000017.1 Genbank CDS 49415 50212 . + 0 ID=cds-EGT82188.1;Parent=gene-GGE_0936;Dbxref=PFAM:PF11104,NCBI_GP:EGT82188.1;Name=EGT82188.1;gbkey=CDS;gene=comA;locus_tag=GGE_0936;product=Competence protein A;protein_id=EGT82188.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 49448 50147 . + . ID=id-GGE_0936;Note=BlastProDom:PD123385~q4qna6_haei8_q4qna6;gbkey=misc_feature;gene=comA;locus_tag=GGE_0936 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 49508 49829 . + . ID=id-GGE_0936-2;Note=superfamily%3B label: FtsA superfamily;gbkey=misc_feature;gene=comA;locus_tag=GGE_0936 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 49544 49793 . + . ID=id-GGE_0936-3;Dbxref=PFAM:PF11104;Note=competence_a;gbkey=misc_feature;gene=comA;locus_tag=GGE_0936 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 49436 49445 . - . ID=id-AFQR01000017.1:49436..49445;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50023 50032 . - . ID=id-AFQR01000017.1:50023..50032;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 50213 50719 . + . ID=gene-GGE_0937;Name=comB;gbkey=Gene;gene=comB;gene_biotype=protein_coding;locus_tag=GGE_0937 GCA_000222085.2|AFQR01000017.1 Genbank CDS 50213 50719 . + 0 ID=cds-EGT82189.1;Parent=gene-GGE_0937;Dbxref=InterPro:IPR007813,InterPro:IPR016778,PFAM:PF05137,PIR:PIRSF020785,NCBI_GP:EGT82189.1;Name=EGT82189.1;gbkey=CDS;gene=comB;locus_tag=GGE_0937;product=Competence protein B;protein_id=EGT82189.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50213 50717 . + . ID=id-GGE_0937;Dbxref=InterPro:IPR016778,PIR:PIRSF020785;Note=competence protein comb~competence protein comb;gbkey=misc_feature;gene=comB;locus_tag=GGE_0937 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50225 50600 . + . ID=id-GGE_0937-2;Dbxref=InterPro:IPR007813,PFAM:PF05137;Note=piln~fimbrial assembly;gbkey=misc_feature;gene=comB;locus_tag=GGE_0937 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50273 50282 . + . ID=id-GGE_0937-3;Note=transmembrane_regions;gbkey=misc_feature;gene=comB;locus_tag=GGE_0937 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50243 50345 . - . ID=id-AFQR01000017.1:50243..50345;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50279 50339 . - . ID=id-AFQR01000017.1:50279..50339;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 50716 51237 . + . ID=gene-GGE_0938;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=GGE_0938 GCA_000222085.2|AFQR01000017.1 Genbank CDS 50716 51237 . + 0 ID=cds-EGT82190.1;Parent=gene-GGE_0938;Dbxref=NCBI_GP:EGT82190.1;Name=EGT82190.1;gbkey=CDS;gene=comC;locus_tag=GGE_0938;product=Competence protein C;protein_id=EGT82190.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50716 51235 . + . ID=id-GGE_0938;Note=BlastProDom:PD415499~q4qna8_haei8_q4qna8;gbkey=misc_feature;gene=comC;locus_tag=GGE_0938 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 50776 50779 . + . ID=id-GGE_0938-2;Note=transmembrane_regions;gbkey=misc_feature;gene=comC;locus_tag=GGE_0938 GCA_000222085.2|AFQR01000017.1 Genbank gene 51234 51647 . + . ID=gene-GGE_0939;Name=comD;gbkey=Gene;gene=comD;gene_biotype=protein_coding;locus_tag=GGE_0939 GCA_000222085.2|AFQR01000017.1 Genbank CDS 51234 51647 . + 0 ID=cds-EGT82191.1;Parent=gene-GGE_0939;Dbxref=InterPro:IPR007446,PFAM:PF04351,NCBI_GP:EGT82191.1;Name=EGT82191.1;gbkey=CDS;gene=comD;locus_tag=GGE_0939;product=Competence protein D;protein_id=EGT82191.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51273 51609 . + . ID=id-GGE_0939;Note=BlastProDom:PD968187~q30ks2_canfa_q30ks2;gbkey=misc_feature;gene=comD;locus_tag=GGE_0939 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51291 51537 . + . ID=id-GGE_0939-2;Dbxref=InterPro:IPR007446,PFAM:PF04351;Note=pilp~pilus assembly protein pilp;gbkey=misc_feature;gene=comD;locus_tag=GGE_0939 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51405 51426 . + . ID=id-GGE_0939-3;Note=superfamily%3B label: PilP superfamily;gbkey=misc_feature;gene=comD;locus_tag=GGE_0939 GCA_000222085.2|AFQR01000017.1 Genbank gene 51657 52994 . + . ID=gene-GGE_0940;Name=comE;gbkey=Gene;gene=comE;gene_biotype=protein_coding;locus_tag=GGE_0940 GCA_000222085.2|AFQR01000017.1 Genbank CDS 51657 52994 . + 0 ID=cds-EGT82192.1;Parent=gene-GGE_0940;Dbxref=GeneID:1169008,InterPro:IPR001775,InterPro:IPR001814,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR013355,PFAM:PF00263,PFAM:PF03958,TIGRFAM:TIGR02515,NCBI_GP:EGT82192.1;Name=EGT82192.1;Ontology_term=GO:0009297,GO:0009306,GO:0016020;gbkey=CDS;gene=comE;go_component=membrane|0016020||;go_process=pilus assembly|0009297||,protein secretion|0009306||;locus_tag=GGE_0940;product=Competence protein E;protein_id=EGT82192.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51672 51717 . + . ID=id-GGE_0940;Note=transmembrane_regions;gbkey=misc_feature;gene=comE;locus_tag=GGE_0940 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51673 51682 . + . ID=id-GGE_0940-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=comE;locus_tag=GGE_0940 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51744 52860 . + . ID=id-GGE_0940-3;Dbxref=InterPro:IPR013355,TIGRFAM:TIGR02515;Note=multi-dom~iv_pilus_pilq: type iv pilus secretin p~type iv pilus secretin pilq%3B label: IV_pilus_PilQ;gbkey=misc_feature;gene=comE;locus_tag=GGE_0940 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51690 52218 . - . ID=id-AFQR01000017.1:51690..52218;Dbxref=InterPro:IPR001775;Note=FPrintScan:PR00811~bcterialgspd~bacterial general secretion pathway protein d;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51690 52071 . - . ID=id-AFQR01000017.1:51690..52071;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51702 52905 . - . ID=id-AFQR01000017.1:51702..52905;Dbxref=InterPro:IPR001775;Note=FPrintScan:PR00811~bcterialgspd~bacterial general secretion pathway protein d;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51714 52836 . - . ID=id-AFQR01000017.1:51714..52836;Dbxref=InterPro:IPR001775;Note=FPrintScan:PR00811~bcterialgspd~bacterial general secretion pathway protein d;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51726 52884 . - . ID=id-AFQR01000017.1:51726..52884;Dbxref=InterPro:IPR001814;Note=FPrintScan:PR01032~phageiv~filamentous bacteriophage vg4 protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51729 52527 . - . ID=id-AFQR01000017.1:51729..52527;Dbxref=InterPro:IPR001814;Note=FPrintScan:PR01032~phageiv~filamentous bacteriophage vg4 protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51729 52404 . - . ID=id-AFQR01000017.1:51729..52404;Dbxref=InterPro:IPR001814;Note=FPrintScan:PR01032~phageiv~filamentous bacteriophage vg4 protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51732 52452 . - . ID=id-AFQR01000017.1:51732..52452;Dbxref=InterPro:IPR001775;Note=FPrintScan:PR00811~bcterialgspd~bacterial general secretion pathway protein d;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51744 52725 . - . ID=id-AFQR01000017.1:51744..52725;Dbxref=InterPro:IPR001814;Note=FPrintScan:PR01032~phageiv~filamentous bacteriophage vg4 protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51852 52026 . - . ID=id-AFQR01000017.1:51852..52026;Dbxref=InterPro:IPR005644,PFAM:PF03958;Note=secretin_n~nolw-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 51855 52023 . - . ID=id-AFQR01000017.1:51855..52023;Note=superfamily%3B label: Secretin_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 52140 52464 . - . ID=id-AFQR01000017.1:52140..52464;Dbxref=InterPro:IPR004846,PFAM:PF00263;Note=superfamily~secretin~type ii/iii secretion system%3B label: Secretin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 53007 53693 . + . ID=gene-GGE_0941;Name=comF;gbkey=Gene;gene=comF;gene_biotype=protein_coding;locus_tag=GGE_0941 GCA_000222085.2|AFQR01000017.1 Genbank CDS 53007 53693 . + 0 ID=cds-EGT82193.1;Parent=gene-GGE_0941;Dbxref=GeneID:401671,InterPro:IPR000836,InterPro:IPR005222,InterPro:IPR005854,PFAM:PF00156,TIGRFAM:TIGR00201,NCBI_GP:EGT82193.1;Name=EGT82193.1;Ontology_term=GO:0009116,GO:0009113,GO:0004044;gbkey=CDS;gene=comF;go_function=amidophosphoribosyltransferase activity|0004044||;go_process=nucleoside metabolic process|0009116||,purine base biosynthetic process|0009113||;locus_tag=GGE_0941;product=Competence protein F;protein_id=EGT82193.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53007 53691 . + . ID=id-GGE_0941;Note=multi-dom%3B label: ComFC;gbkey=misc_feature;gene=comF;locus_tag=GGE_0941 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53076 53622 . + . ID=id-GGE_0941-2;Dbxref=InterPro:IPR005222,TIGRFAM:TIGR00201;Note=superfamily~comf: comf family protein~competence protein comf%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=comF;locus_tag=GGE_0941 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53133 53562 . + . ID=id-GGE_0941-3;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=comF;locus_tag=GGE_0941 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53145 53550 . + . ID=id-GGE_0941-4;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=comF;locus_tag=GGE_0941 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53088 53577 . - . ID=id-AFQR01000017.1:53088..53577;Dbxref=InterPro:IPR005854;Note=HMMPanther:PTHR11907~family not named~amidophosphoribosyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53259 53427 . - . ID=id-AFQR01000017.1:53259..53427;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53271 53280 . - . ID=id-AFQR01000017.1:53271..53280;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 53769 54365 . + . ID=gene-GGE_0942;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank CDS 53769 54365 . + 0 ID=cds-EGT82194.1;Parent=gene-GGE_0942;Dbxref=GeneID:166990526,InterPro:IPR000361,InterPro:IPR001075,InterPro:IPR017726,PFAM:PF01106,PFAM:PF01521,TIGRFAM:TIGR03341,NCBI_GP:EGT82194.1;Name=EGT82194.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539,GO:0005506,GO:0051536;gbkey=CDS;gene=nfuA;go_function=4 iron 4 sulfur cluster binding|0051539||,iron ion binding|0005506||,iron-sulfur cluster binding|0051536||;go_process=iron-sulfur cluster assembly|0016226||,protein maturation|0051604||;locus_tag=GGE_0942;product=Fe/S biogenesis protein nfuA;protein_id=EGT82194.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53781 54069 . + . ID=id-GGE_0942;Note=superfamily%3B label: Fe-S_biosyn superfamily;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53781 54060 . + . ID=id-GGE_0942-2;Dbxref=InterPro:IPR000361;Note=Gene3D:2.60.300.12~fes cluster biogenesis;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53787 54348 . + . ID=id-GGE_0942-3;Note=HMMPanther:PTHR10072:SF26~iron-sulfur cluster assembly 2~HMMPanther:PTHR10072~iron-sulfur cluster assembly protein;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53787 54066 . + . ID=id-GGE_0942-4;Dbxref=InterPro:IPR000361;Note=superfamily:SSF89360~hesb-like domain~fes cluster biogenesis;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53790 54345 . + . ID=id-GGE_0942-5;Dbxref=InterPro:IPR017726;Note=multi-dom~HAMAP:MF_01637~fe_s_biogen_nfua~fe/s biogenesis protein%2C nfua%3B label: PRK11190;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53793 54342 . + . ID=id-GGE_0942-6;Dbxref=InterPro:IPR017726,TIGRFAM:TIGR03341;Note=yhgi_gnty: iscr-regulated protein yhgi~fe/s biogenesis protein%2C nfua;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53793 54048 . + . ID=id-GGE_0942-7;Dbxref=InterPro:IPR000361,PFAM:PF01521;Note=fe-s_biosyn~fes cluster biogenesis;gbkey=misc_feature;gene=nfuA;locus_tag=GGE_0942 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53958 54144 . - . ID=id-AFQR01000017.1:53958..54144;Dbxref=InterPro:IPR001075;Note=BlastProDom:PD002830~y378_haedu_q7vnv0~nif system fes cluster assembly%2C nifu;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 53958 54120 . - . ID=id-AFQR01000017.1:53958..54120;Dbxref=InterPro:IPR001075,PFAM:PF01106;Note=nifu~nif system fes cluster assembly%2C nifu;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54048 54081 . - . ID=id-AFQR01000017.1:54048..54081;Note=superfamily%3B label: NifU superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54051 54069 . - . ID=id-AFQR01000017.1:54051..54069;Note=superfamily:SSF117916~fe-s cluster assembly (fsca) domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54392 54401 . - . ID=id-AFQR01000017.1:54392..54401;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 54433 55230 . + . ID=gene-GGE_0943;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank CDS 54433 55230 . + 0 ID=cds-EGT82195.1;Parent=gene-GGE_0943;Dbxref=InterPro:IPR000086,InterPro:IPR015375,InterPro:IPR015376,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR022925,PFAM:PF00293,PFAM:PF09296,PFAM:PF09297,NCBI_GP:EGT82195.1;Name=EGT82195.1;Ontology_term=GO:0000210,GO:0016787,GO:0046872;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||,hydrolase activity|0016787||,metal ion binding|0046872||;locus_tag=GGE_0943;product=NADH pyrophosphatase;protein_id=EGT82195.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54433 55219 . + . ID=id-GGE_0943;Dbxref=InterPro:IPR022925;Note=HAMAP:MF_00297~nudix_nudc~nadh pyrophosphatase nudc;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54433 55204 . + . ID=id-GGE_0943-2;Note=multi-dom%3B label: nudC;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54442 54718 . + . ID=id-GGE_0943-3;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54463 54682 . + . ID=id-GGE_0943-4;Note=superfamily%3B label: NUDIX-like superfamily;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54466 54676 . + . ID=id-GGE_0943-5;Dbxref=InterPro:IPR015375,PFAM:PF09296;Note=nudix-like~nadh pyrophosphatase-like;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54649 54970 . + . ID=id-GGE_0943-6;Note=HMMPanther:PTHR22769~family not named;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54664 54991 . + . ID=id-GGE_0943-7;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54709 54895 . + . ID=id-GGE_0943-8;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54731 54740 . + . ID=id-GGE_0943-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54811 54817 . + . ID=id-GGE_0943-10;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;gene=nudC;locus_tag=GGE_0943 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54499 54922 . - . ID=id-AFQR01000017.1:54499..54922;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54529 54715 . - . ID=id-AFQR01000017.1:54529..54715;Dbxref=InterPro:IPR015376,PFAM:PF09297;Note=superfamily~zf-nadh-ppase~zinc ribbon%2C nadh pyrophosphatase%3B label: zf-NADH-PPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54757 54829 . - . ID=id-AFQR01000017.1:54757..54829;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 54811 54823 . - . ID=id-AFQR01000017.1:54811..54823;Note=specific~superfamily%3B label: NADH_pyrophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 55263 55853 . + . ID=gene-GGE_0944;Name=GGE_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0944 GCA_000222085.2|AFQR01000017.1 Genbank CDS 55263 55853 . + 0 ID=cds-EGT82196.1;Parent=gene-GGE_0944;Dbxref=GeneID:1176343,InterPro:IPR007338,InterPro:IPR022605,InterPro:IPR023381,PFAM:PF04222,PFAM:PF11144,NCBI_GP:EGT82196.1;Name=EGT82196.1;Note=HI_0431;gbkey=CDS;locus_tag=GGE_0944;product=Hypothetical protein;protein_id=EGT82196.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 55263 55845 . + . ID=id-GGE_0944;Dbxref=InterPro:IPR023381;Note=superfamily~Gene3D:1.20.1590.10~yp001051499.1-like domain%3B label: DUF416 superfamily;gbkey=misc_feature;locus_tag=GGE_0944 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 55347 55599 . + . ID=id-GGE_0944-2;Dbxref=InterPro:IPR007338,PFAM:PF04222;Note=duf416~protein of unknown function duf416;gbkey=misc_feature;locus_tag=GGE_0944 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 55380 55482 . + . ID=id-GGE_0944-3;Dbxref=InterPro:IPR022605,PFAM:PF11144;Note=duf2920~protein of unknown function duf2920;gbkey=misc_feature;locus_tag=GGE_0944 GCA_000222085.2|AFQR01000017.1 Genbank gene 55991 56263 . + . ID=gene-GGE_0945;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;locus_tag=GGE_0945 GCA_000222085.2|AFQR01000017.1 Genbank CDS 55991 56263 . + 0 ID=cds-EGT82197.1;Parent=gene-GGE_0945;Dbxref=GeneID:1169231,InterPro:IPR000119,InterPro:IPR010992,InterPro:IPR020816,PFAM:PF00216,NCBI_GP:EGT82197.1;Name=EGT82197.1;Ontology_term=GO:0003677;gbkey=CDS;gene=hup;go_function=DNA binding|0003677||;locus_tag=GGE_0945;product=DNA-binding protein HU;protein_id=EGT82197.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 55991 56261 . + . ID=id-GGE_0945;Dbxref=InterPro:IPR000119,InterPro:IPR010992,PFAM:PF00216;Note=superfamily:SSF47729~ihf-like dna-binding proteins~ihf-like dna-binding~Gene3D:4.10.520.10~histone-like bacterial dna-binding protein~bac_dna_binding~histone-like bacterial dna-binding protein;gbkey=misc_feature;gene=hup;locus_tag=GGE_0945 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 55997 56252 . + . ID=id-GGE_0945-2;Note=specific~superfamily%3B label: HU_IHF;gbkey=misc_feature;gene=hup;locus_tag=GGE_0945 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56033 56165 . - . ID=id-AFQR01000017.1:56033..56165;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56036 56213 . - . ID=id-AFQR01000017.1:56036..56213;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56039 56111 . - . ID=id-AFQR01000017.1:56039..56111;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56051 56129 . - . ID=id-AFQR01000017.1:56051..56129;Dbxref=InterPro:IPR020816;Note=PatternScan:PS00045~histone_like~histone-like dna-binding protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 56391 57164 . + . ID=gene-GGE_0946;Name=GGE_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank CDS 56391 57164 . + 0 ID=cds-EGT82198.1;Parent=gene-GGE_0946;Dbxref=GeneID:325579268,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,PFAM:PF00455,PFAM:PF08220,NCBI_GP:EGT82198.1;Name=EGT82198.1;Note=ZP_08149224;Ontology_term=GO:0006355,GO:0005622,GO:0003700;gbkey=CDS;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0946;product=glucitol operon repressor;protein_id=EGT82198.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56412 56538 . + . ID=id-GGE_0946;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56418 56631 . + . ID=id-GGE_0946-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56421 56559 . + . ID=id-GGE_0946-3;Dbxref=InterPro:IPR001034;Note=ProfileScan:PS51000~hth_deor_2~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56424 57132 . + . ID=id-GGE_0946-4;Note=multi-dom%3B label: srlR;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56430 56553 . + . ID=id-GGE_0946-5;Dbxref=InterPro:IPR001034,PFAM:PF08220;Note=hth_deor~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56430 56550 . + . ID=id-GGE_0946-6;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56430 56496 . + . ID=id-GGE_0946-7;Dbxref=InterPro:IPR018356;Note=PatternScan:PS00894~hth_deor_1~transcription regulator%2C hth deor-type%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56622 56883 . + . ID=id-GGE_0946-8;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56631 56862 . + . ID=id-GGE_0946-9;Note=superfamily%3B label: SugarP_isomerase superfamily;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56631 56823 . + . ID=id-GGE_0946-10;Note=Gene3D:3.40.50.1360;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56634 56859 . + . ID=id-GGE_0946-11;Dbxref=InterPro:IPR014036,PFAM:PF00455;Note=deor~transcription regulator hth%2C deor;gbkey=misc_feature;locus_tag=GGE_0946 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56436 56988 . - . ID=id-AFQR01000017.1:56436..56988;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56436 56484 . - . ID=id-AFQR01000017.1:56436..56484;Dbxref=InterPro:IPR001034;Note=FPrintScan:PR00037~hthlacr~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 56448 56526 . - . ID=id-AFQR01000017.1:56448..56526;Dbxref=InterPro:IPR001034;Note=FPrintScan:PR00037~hthlacr~transcription regulator hth%2C deor n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57162 57171 . + . ID=id-AFQR01000017.1:57162..57171;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 57220 59052 . + . ID=gene-GGE_0947;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank CDS 57220 59052 . + 0 ID=cds-EGT82199.1;Parent=gene-GGE_0947;Dbxref=GeneID:1169920,InterPro:IPR000583,InterPro:IPR001347,InterPro:IPR005855,InterPro:IPR017932,PFAM:PF00310,PFAM:PF01380,TIGRFAM:TIGR01135,NCBI_GP:EGT82199.1;Name=EGT82199.1;Ontology_term=GO:0016051,GO:0005975,GO:0008152,GO:0005737,GO:0004360,GO:0005529;gbkey=CDS;gene=glmS;go_component=cytoplasm|0005737||;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||,sugar binding|0005529||;go_process=carbohydrate biosynthetic process|0016051||,carbohydrate metabolic process|0005975||,metabolic process|0008152||;locus_tag=GGE_0947;product=Glucosamine--fructose-6-phosphate aminotransferase isomerizing;protein_id=EGT82199.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57220 59050 . + . ID=id-GGE_0947;Dbxref=InterPro:IPR005855;Note=multi-dom~HAMAP:MF_00164~glms~glucosamine-fructose-6-phosphate aminotransferase%2C isomerising%3B label: PRK00331;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 59047 . + . ID=id-GGE_0947-2;Dbxref=InterPro:IPR005855,TIGRFAM:TIGR01135;Note=glms: glutamine-fructose-6-phosphate transam~glucosamine-fructose-6-phosphate aminotransferase%2C isomerising~HMMPanther:PTHR10937:SF0~glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing~HMMPanther:PTHR10937~glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 58117 . + . ID=id-GGE_0947-3;Note=Gene3D:3.60.20.10;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 57889 . + . ID=id-GGE_0947-4;Note=superfamily:SSF56235~n-terminal nucleophile aminohydrolase (ntn hydrolase);gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 57871 . + . ID=id-GGE_0947-5;Dbxref=InterPro:IPR017932;Note=ProfileScan:PS51278~gatase_type_2~glutamine amidotransferase%2C type ii;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 57862 . + . ID=id-GGE_0947-6;Note=specific~superfamily%3B label: GFAT;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57226 57343 . + . ID=id-GGE_0947-7;Dbxref=InterPro:IPR000583,PFAM:PF00310;Note=gatase_2~glutamine amidotransferase%2C class-ii;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57397 57592 . + . ID=id-GGE_0947-8;Dbxref=InterPro:IPR000583,PFAM:PF00310;Note=gatase_2~glutamine amidotransferase%2C class-ii;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57952 58321 . + . ID=id-GGE_0947-9;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;gene=glmS;locus_tag=GGE_0947 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57595 58123 . - . ID=id-AFQR01000017.1:57595..58123;Note=Gene3D:3.40.50.10490;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57601 58105 . - . ID=id-AFQR01000017.1:57601..58105;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57607 58090 . - . ID=id-AFQR01000017.1:57607..58090;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57610 58609 . - . ID=id-AFQR01000017.1:57610..58609;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57646 58597 . - . ID=id-AFQR01000017.1:57646..58597;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57667 58054 . - . ID=id-AFQR01000017.1:57667..58054;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57682 58585 . - . ID=id-AFQR01000017.1:57682..58585;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 57733 58540 . - . ID=id-AFQR01000017.1:57733..58540;Note=Gene3D:3.40.50.10490;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59050 59059 . + . ID=id-AFQR01000017.1:59050..59059;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 59151 59468 . - . ID=gene-GGE_0948;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank CDS 59151 59468 . - 0 ID=cds-EGT82200.1;Parent=gene-GGE_0948;Dbxref=GeneID:81336006,InterPro:IPR002197,InterPro:IPR005412,InterPro:IPR009057,InterPro:IPR020441,PFAM:PF02954,PIR:PIRSF002097,NCBI_GP:EGT82200.1;Name=EGT82200.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515,GO:0003700;gbkey=CDS;gene=fis;go_function=DNA binding|0003677||,protein binding|0005515||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0948;product=DNA-binding protein fis;protein_id=EGT82200.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59151 59436 . - . ID=id-GGE_0948;Dbxref=InterPro:IPR005412,PIR:PIRSF002097;Note=dna-binding protein fis~dna-binding protein fis;gbkey=misc_feature;gene=fis;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59157 59433 . - . ID=id-GGE_0948-2;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;gene=fis;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59166 59421 . - . ID=id-GGE_0948-3;Note=superfamily%3B label: HTH_8 superfamily;gbkey=misc_feature;gene=fis;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59181 59205 . - . ID=id-GGE_0948-4;Dbxref=InterPro:IPR005412;Note=FPrintScan:PR01591~dnabindngfis~dna-binding protein fis;gbkey=misc_feature;gene=fis;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59235 59352 . - . ID=id-GGE_0948-5;Note=Gene3D:1.10.1680.10;gbkey=misc_feature;gene=fis;locus_tag=GGE_0948 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59190 59325 . + . ID=id-AFQR01000017.1:59190..59325;Dbxref=InterPro:IPR005412;Note=FPrintScan:PR01591~dnabindngfis~dna-binding protein fis;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59199 59280 . + . ID=id-AFQR01000017.1:59199..59280;Dbxref=InterPro:IPR005412;Note=FPrintScan:PR01591~dnabindngfis~dna-binding protein fis;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59202 59232 . + . ID=id-AFQR01000017.1:59202..59232;Dbxref=InterPro:IPR005412;Note=FPrintScan:PR01591~dnabindngfis~dna-binding protein fis;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59205 59337 . + . ID=id-AFQR01000017.1:59205..59337;Dbxref=InterPro:IPR020441;Note=FPrintScan:PR01590~hthfis~helix-turn-helix%2C fis;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59214 59388 . + . ID=id-AFQR01000017.1:59214..59388;Dbxref=InterPro:IPR020441;Note=FPrintScan:PR01590~hthfis~helix-turn-helix%2C fis;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59268 59319 . + . ID=id-AFQR01000017.1:59268..59319;Dbxref=InterPro:IPR002197,PFAM:PF02954;Note=hth_8~helix-turn-helix%2C fis-type;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59280 59304 . + . ID=id-AFQR01000017.1:59280..59304;Note=HMMPanther:PTHR24423:SF441~nitrogen regulation protein nr(i)~HMMPanther:PTHR24423~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 59462 60442 . - . ID=gene-GGE_0949;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank CDS 59462 60442 . - 0 ID=cds-EGT82201.1;Parent=gene-GGE_0949;Dbxref=GeneID:1176212,InterPro:IPR001269,InterPro:IPR004652,InterPro:IPR013785,InterPro:IPR018517,PFAM:PF01207,PIR:PIRSF006621,TIGRFAM:TIGR00737,NCBI_GP:EGT82201.1;Name=EGT82201.1;Ontology_term=GO:0008152,GO:0055114,GO:0008033,GO:0003824,GO:0050660,GO:0016491,GO:0017150;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||,tRNA dihydrouridine synthase activity|0017150||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,tRNA processing|0008033||;locus_tag=GGE_0949;product=tRNA-dihydrouridine synthase B;protein_id=EGT82201.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59462 60440 . - . ID=id-GGE_0949;Dbxref=InterPro:IPR001269,PIR:PIRSF006621;Note=trna-dihydrouridine synthase~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59462 60428 . - . ID=id-GGE_0949-2;Dbxref=InterPro:IPR001269;Note=HMMPanther:PTHR11082:SF9~trna-dihydrouridine synthase-related~HMMPanther:PTHR11082~family not named~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59471 60419 . - . ID=id-GGE_0949-3;Dbxref=InterPro:IPR004652,TIGRFAM:TIGR00737;Note=multi-dom~nifr3_yhdg: putative tim-barrel protein%2C n~trna-dihydrouridine synthase%2C tim-barrel%2C nifr3%3B label: nifR3_yhdG;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59483 60176 . - . ID=id-GGE_0949-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59492 60389 . - . ID=id-GGE_0949-5;Note=superfamily:SSF51395~fmn-linked oxidoreductases;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59495 60158 . - . ID=id-GGE_0949-6;Note=specific~superfamily%3B label: DUS_like_FMN;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59504 60377 . - . ID=id-GGE_0949-7;Dbxref=InterPro:IPR001269,PFAM:PF01207;Note=dus~trna-dihydrouridine synthase;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59671 59680 . - . ID=id-GGE_0949-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dusB;locus_tag=GGE_0949 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59519 59744 . + . ID=id-AFQR01000017.1:59519..59744;Dbxref=InterPro:IPR018517;Note=PatternScan:PS01136~upf0034~trna-dihydrouridine synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 59669 60218 . + . ID=id-AFQR01000017.1:59669..60218;Note=Gene3D:1.10.1200.80;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 60589 61476 . - . ID=gene-GGE_0950;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank CDS 60589 61476 . - 0 ID=cds-EGT82202.1;Parent=gene-GGE_0950;Dbxref=GeneID:166223417,InterPro:IPR004498,InterPro:IPR010456,PFAM:PF06325,TIGRFAM:TIGR00406,NCBI_GP:EGT82202.1;Name=EGT82202.1;Ontology_term=GO:0006479,GO:0005737,GO:0008276;gbkey=CDS;gene=prmA;go_component=cytoplasm|0005737||;go_function=protein methyltransferase activity|0008276||;go_process=protein methylation|0006479||;locus_tag=GGE_0950;product=Ribosomal protein L11 methyltransferase;protein_id=EGT82202.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60589 61468 . - . ID=id-GGE_0950;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60598 61459 . - . ID=id-GGE_0950-2;Dbxref=InterPro:IPR004498,InterPro:IPR010456,PFAM:PF06325;Note=HAMAP:MF_00735~methyltr_prma~ribosomal protein l11 methyltransferase~prma~ribosomal l11 methyltransferase%2C prma;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60598 61441 . - . ID=id-GGE_0950-3;Dbxref=InterPro:IPR004498,TIGRFAM:TIGR00406;Note=multi-dom~prma: ribosomal protein l11 methyltransferas~ribosomal protein l11 methyltransferase%3B label: prmA;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60709 61345 . - . ID=id-GGE_0950-4;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60754 61282 . - . ID=id-GGE_0950-5;Note=HMMPanther:PTHR18895:SF3~ribosomal protein l11 methyltransferase (l11 mtase)~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60922 61117 . - . ID=id-GGE_0950-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=prmA;locus_tag=GGE_0950 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 60640 61093 . + . ID=id-AFQR01000017.1:60640..61093;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 61510 62382 . - . ID=gene-GGE_0951;Name=GGE_0951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank CDS 61510 62382 . - 0 ID=cds-EGT82203.1;Parent=gene-GGE_0951;Dbxref=GeneID:145637280,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT82203.1;Name=EGT82203.1;Note=ZP_01792941;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0951;product=putative drug/metabolite transporter;protein_id=EGT82203.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61525 61570 . - . ID=id-GGE_0951;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61525 61546 . - . ID=id-GGE_0951-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61537 61876 . - . ID=id-GGE_0951-3;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61561 61852 . - . ID=id-GGE_0951-4;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61585 62269 . - . ID=id-GGE_0951-5;Note=multi-dom%3B label: 2A78;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61609 61828 . - . ID=id-GGE_0951-6;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_0951 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61552 62059 . + . ID=id-AFQR01000017.1:61552..62059;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61564 61852 . + . ID=id-AFQR01000017.1:61564..61852;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61570 62131 . + . ID=id-AFQR01000017.1:61570..62131;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61570 61693 . + . ID=id-AFQR01000017.1:61570..61693;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61570 61597 . + . ID=id-AFQR01000017.1:61570..61597;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61579 62293 . + . ID=id-AFQR01000017.1:61579..62293;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61579 62215 . + . ID=id-AFQR01000017.1:61579..62215;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61579 62035 . + . ID=id-AFQR01000017.1:61579..62035;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61579 61933 . + . ID=id-AFQR01000017.1:61579..61933;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61579 61765 . + . ID=id-AFQR01000017.1:61579..61765;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61753 62113 . + . ID=id-AFQR01000017.1:61753..62113;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61840 62047 . + . ID=id-AFQR01000017.1:61840..62047;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 61885 61975 . + . ID=id-AFQR01000017.1:61885..61975;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 62502 63956 . - . ID=gene-GGE_0952;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank CDS 62502 63956 . - 0 ID=cds-EGT82204.1;Parent=gene-GGE_0952;Dbxref=GeneID:1172009,InterPro:IPR001734,InterPro:IPR011849,InterPro:IPR018212,InterPro:IPR019900,PFAM:PF00474,TIGRFAM:TIGR00813,TIGRFAM:TIGR02119,NCBI_GP:EGT82204.1;Name=EGT82204.1;Ontology_term=GO:0015887,GO:0006814,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0015233,GO:0031402,GO:0015081,GO:0005215;gbkey=CDS;gene=panF;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=pantothenate transmembrane transporter activity|0015233||,sodium ion binding|0031402||,sodium ion transmembrane transporter activity|0015081||,transporter activity|0005215||;go_process=pantothenate transmembrane transport|0015887||,sodium ion transport|0006814||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0952;product=Sodium/pantothenate symporter;protein_id=EGT82204.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62502 63933 . - . ID=id-GGE_0952;Note=superfamily%3B label: SSF superfamily;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62502 63828 . - . ID=id-GGE_0952-2;Dbxref=InterPro:IPR001734;Note=HMMPanther:PTHR11819:SF14~sodium/pantothenate symporter~HMMPanther:PTHR11819~family not named~sodium/solute symporter;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62508 63837 . - . ID=id-GGE_0952-3;Dbxref=InterPro:IPR001734;Note=ProfileScan:PS50283~na_solut_symp_3~sodium/solute symporter;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62511 63915 . - . ID=id-GGE_0952-4;Dbxref=InterPro:IPR011849,TIGRFAM:TIGR02119;Note=panf: sodium/pantothenate symporter~sodium/pantothenate symporter;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62514 62568 . - . ID=id-GGE_0952-5;Note=transmembrane_regions;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62610 63693 . - . ID=id-GGE_0952-6;Dbxref=InterPro:IPR001734,InterPro:IPR019900,PFAM:PF00474,TIGRFAM:TIGR00813;Note=sss: transporter%2C solute:sodium symporter (s~sodium/solute symporter%2C subgroup~ssf~sodium/solute symporter;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 63315 63324 . - . ID=id-GGE_0952-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=panF;locus_tag=GGE_0952 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62503 62512 . + . ID=id-AFQR01000017.1:62503..62512;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62541 62880 . + . ID=id-AFQR01000017.1:62541..62880;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62541 62769 . + . ID=id-AFQR01000017.1:62541..62769;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62541 62649 . + . ID=id-AFQR01000017.1:62541..62649;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62550 63069 . + . ID=id-AFQR01000017.1:62550..63069;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62556 63849 . + . ID=id-AFQR01000017.1:62556..63849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62556 63609 . + . ID=id-AFQR01000017.1:62556..63609;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62562 63072 . + . ID=id-AFQR01000017.1:62562..63072;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62565 63744 . + . ID=id-AFQR01000017.1:62565..63744;Dbxref=InterPro:IPR018212;Note=PatternScan:PS00457~na_solut_symp_2~sodium/solute symporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63768 . + . ID=id-AFQR01000017.1:62571..63768;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63681 . + . ID=id-AFQR01000017.1:62571..63681;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63600 . + . ID=id-AFQR01000017.1:62571..63600;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63423 . + . ID=id-AFQR01000017.1:62571..63423;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63312 . + . ID=id-AFQR01000017.1:62571..63312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 63210 . + . ID=id-AFQR01000017.1:62571..63210;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 62985 . + . ID=id-AFQR01000017.1:62571..62985;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 62874 . + . ID=id-AFQR01000017.1:62571..62874;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 62721 . + . ID=id-AFQR01000017.1:62571..62721;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62571 62640 . + . ID=id-AFQR01000017.1:62571..62640;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62580 62967 . + . ID=id-AFQR01000017.1:62580..62967;Dbxref=InterPro:IPR018212;Note=PatternScan:PS00456~na_solut_symp_1~sodium/solute symporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 62815 62824 . + . ID=id-AFQR01000017.1:62815..62824;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 63953 64210 . - . ID=gene-GGE_0953;Name=GGE_0953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0953 GCA_000222085.2|AFQR01000017.1 Genbank CDS 63953 64210 . - 0 ID=cds-EGT82205.1;Parent=gene-GGE_0953;Dbxref=InterPro:IPR010398,PFAM:PF06196,NCBI_GP:EGT82205.1;Name=EGT82205.1;Note=HI_0974.1;gbkey=CDS;locus_tag=GGE_0953;product=hypothetical protein;protein_id=EGT82205.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 63962 64193 . - . ID=id-GGE_0953;Note=superfamily%3B label: DUF997 superfamily;gbkey=misc_feature;locus_tag=GGE_0953 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 63971 64178 . - . ID=id-GGE_0953-2;Dbxref=InterPro:IPR010398;Note=BlastProDom:PD745092~y974a_haein_p46455~protein of unknown function duf997;gbkey=misc_feature;locus_tag=GGE_0953 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 63977 64175 . - . ID=id-GGE_0953-3;Dbxref=InterPro:IPR010398,PFAM:PF06196;Note=duf997~protein of unknown function duf997;gbkey=misc_feature;locus_tag=GGE_0953 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 63992 64022 . - . ID=id-GGE_0953-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0953 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64022 64088 . + . ID=id-AFQR01000017.1:64022..64088;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 64415 65761 . - . ID=gene-GGE_0954;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank CDS 64415 65761 . - 0 ID=cds-EGT82206.1;Parent=gene-GGE_0954;Dbxref=GeneID:1168279,InterPro:IPR004549,InterPro:IPR005479,InterPro:IPR005481,InterPro:IPR005482,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR011764,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF00289,PFAM:PF02785,PFAM:PF02786,TIGRFAM:TIGR00514,NCBI_GP:EGT82206.1;Name=EGT82206.1;Ontology_term=GO:0008152,GO:0005524,GO:0004075,GO:0003824,GO:0016874;gbkey=CDS;gene=accC;go_function=ATP binding|0005524||,biotin carboxylase activity|0004075||,catalytic activity|0003824||,ligase activity|0016874||;go_process=metabolic process|0008152||;locus_tag=GGE_0954;product=Biotin carboxylase;protein_id=EGT82206.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 65759 . - . ID=id-GGE_0954;Dbxref=InterPro:IPR004549,TIGRFAM:TIGR00514;Note=multi-dom~accc: acetyl-coa carboxylase%2C biotin carboxy~acetyl-coa carboxylase%2C biotin carboxylase%3B label: PRK08591;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 65750 . - . ID=id-GGE_0954-2;Dbxref=InterPro:IPR011764;Note=ProfileScan:PS50979~bc~biotin carboxylation domain;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 65741 . - . ID=id-GGE_0954-3;Note=HMMPanther:PTHR18866~family not named;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 64802 . - . ID=id-GGE_0954-4;Dbxref=InterPro:IPR013817;Note=Gene3D:3.40.50.20~pre-atp-grasp fold;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 64754 . - . ID=id-GGE_0954-5;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64415 64745 . - . ID=id-GGE_0954-6;Dbxref=InterPro:IPR005481,PFAM:PF00289;Note=cpsase_l_chain~carbamoyl-phosphate synthase%2C large subunit;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64421 64742 . - . ID=id-GGE_0954-7;Note=superfamily%3B label: CPSase_L_chain superfamily;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64664 65246 . - . ID=id-GGE_0954-8;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64760 65045 . - . ID=id-GGE_0954-9;Note=superfamily%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64760 65039 . - . ID=id-GGE_0954-10;Dbxref=InterPro:IPR005479,PFAM:PF02786;Note=cpsase_l_d2~carbamoyl-phosphate synthetase%2C large subunit%2C atp-binding;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64775 65009 . - . ID=id-GGE_0954-11;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65027 65138 . - . ID=id-GGE_0954-12;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature;gene=accC;locus_tag=GGE_0954 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64439 65273 . + . ID=id-AFQR01000017.1:64439..65273;Dbxref=InterPro:IPR005479;Note=PatternScan:PS00867~cpsase_2~carbamoyl-phosphate synthetase%2C large subunit%2C atp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64454 64901 . + . ID=id-AFQR01000017.1:64454..64901;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64460 64877 . + . ID=id-AFQR01000017.1:64460..64877;Dbxref=InterPro:IPR005479;Note=PatternScan:PS00866~cpsase_1~carbamoyl-phosphate synthetase%2C large subunit%2C atp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64637 64805 . + . ID=id-AFQR01000017.1:64637..64805;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64733 65423 . + . ID=id-AFQR01000017.1:64733..65423;Dbxref=InterPro:IPR005482,PFAM:PF02785;Note=superfamily~biotin_carb_c~biotin carboxylase%3B label: Biotin_carb_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 64763 65408 . + . ID=id-AFQR01000017.1:64763..65408;Dbxref=InterPro:IPR011054;Note=superfamily:SSF51246~rudiment single hybrid motif~rudiment single hybrid motif;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 65938 66405 . - . ID=gene-GGE_0955;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=GGE_0955 GCA_000222085.2|AFQR01000017.1 Genbank CDS 65938 66405 . - 0 ID=cds-EGT82207.1;Parent=gene-GGE_0955;Dbxref=GeneID:1168618,InterPro:IPR000089,InterPro:IPR001249,InterPro:IPR001882,InterPro:IPR011053,PFAM:PF00364,TIGRFAM:TIGR00531,NCBI_GP:EGT82207.1;Name=EGT82207.1;Ontology_term=GO:0006633,GO:0009317,GO:0003989;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||;go_function=acetyl-CoA carboxylase activity|0003989||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_0955;product=Biotin carboxyl carrier protein of acetyl-CoA carboxylase;protein_id=EGT82207.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65938 66403 . - . ID=id-GGE_0955;Dbxref=InterPro:IPR001249,TIGRFAM:TIGR00531;Note=bccp: acetyl-coa carboxylase%2C biotin carboxy~acetyl-coa biotin carboxyl carrier~HMMPanther:PTHR18866:SF59~biotin carboxyl carrier protein of acetyl-coa carboxylase~HMMPanther:PTHR18866~family not named;gbkey=misc_feature;gene=accB;locus_tag=GGE_0955 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65956 66388 . - . ID=id-GGE_0955-2;Note=multi-dom%3B label: AccB;gbkey=misc_feature;gene=accB;locus_tag=GGE_0955 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66043 66055 . - . ID=id-GGE_0955-3;Note=seg;gbkey=misc_feature;gene=accB;locus_tag=GGE_0955 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66166 66178 . - . ID=id-GGE_0955-4;Dbxref=InterPro:IPR011053;Note=superfamily:SSF51230~single hybrid motif~single hybrid motif;gbkey=misc_feature;gene=accB;locus_tag=GGE_0955 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65980 66286 . + . ID=id-AFQR01000017.1:65980..66286;Dbxref=InterPro:IPR001249;Note=FPrintScan:PR01071~acoabiotincc~acetyl-coa biotin carboxyl carrier;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65980 66190 . + . ID=id-AFQR01000017.1:65980..66190;Dbxref=InterPro:IPR001249;Note=FPrintScan:PR01071~acoabiotincc~acetyl-coa biotin carboxyl carrier;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65983 66241 . + . ID=id-AFQR01000017.1:65983..66241;Dbxref=InterPro:IPR001249;Note=FPrintScan:PR01071~acoabiotincc~acetyl-coa biotin carboxyl carrier;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 65992 66271 . + . ID=id-AFQR01000017.1:65992..66271;Dbxref=InterPro:IPR001882;Note=PatternScan:PS00188~biotin~biotin-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66157 66184 . + . ID=id-AFQR01000017.1:66157..66184;Dbxref=InterPro:IPR000089,PFAM:PF00364;Note=specific~superfamily~biotin_lipoyl~biotin/lipoyl attachment%3B label: biotinyl_domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66163 66178 . + . ID=id-AFQR01000017.1:66163..66178;Dbxref=InterPro:IPR000089;Note=ProfileScan:PS50968~biotinyl_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66166 66178 . + . ID=id-AFQR01000017.1:66166..66178;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66434 66443 . - . ID=id-AFQR01000017.1:66434..66443;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66451 66460 . + . ID=id-AFQR01000017.1:66451..66460;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 66557 67006 . - . ID=gene-GGE_0956;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank CDS 66557 67006 . - 0 ID=cds-EGT82208.1;Parent=gene-GGE_0956;Dbxref=GeneID:81336014,InterPro:IPR001874,InterPro:IPR018509,PFAM:PF01220,PIR:PIRSF001399,TIGRFAM:TIGR01088,NCBI_GP:EGT82208.1;Name=EGT82208.1;Ontology_term=GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||;locus_tag=GGE_0956;product=3-dehydroquinate dehydratase;protein_id=EGT82208.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66557 67004 . - . ID=id-GGE_0956;Dbxref=InterPro:IPR001874;Note=HAMAP:MF_00169~aroq~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66563 66995 . - . ID=id-GGE_0956-2;Dbxref=InterPro:IPR001874;Note=Gene3D:3.40.50.9100~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66566 66995 . - . ID=id-GGE_0956-3;Dbxref=InterPro:IPR001874,PIR:PIRSF001399;Note=3-dehydroquinate dehydratase%2C type ii~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66569 66995 . - . ID=id-GGE_0956-4;Dbxref=InterPro:IPR001874;Note=superfamily:SSF52304~type ii 3-dehydroquinate dehydratase~dehydroquinase%2C class ii~HMMPanther:PTHR21272~family not named~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66575 66980 . - . ID=id-GGE_0956-5;Dbxref=InterPro:IPR001874,TIGRFAM:TIGR01088;Note=aroq: 3-dehydroquinate dehydratase%2C type ii~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66575 66965 . - . ID=id-GGE_0956-6;Dbxref=InterPro:IPR001874,PFAM:PF01220;Note=dhquinase_ii~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66581 66593 . - . ID=id-GGE_0956-7;Note=seg;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66587 66611 . - . ID=id-GGE_0956-8;Dbxref=InterPro:IPR018509;Note=PatternScan:PS01029~dehydroquinase_ii~dehydroquinase%2C class ii%2C conserved site;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66617 66947 . - . ID=id-GGE_0956-9;Dbxref=InterPro:IPR001874;Note=BlastProDom:PD004527~q4qlt8_haei8_q4qlt8~dehydroquinase%2C class ii;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 66620 66932 . - . ID=id-GGE_0956-10;Note=specific~superfamily%3B label: DHQase_II;gbkey=misc_feature;gene=aroQ;locus_tag=GGE_0956 GCA_000222085.2|AFQR01000017.1 Genbank gene 67064 68107 . - . ID=gene-GGE_0957;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank CDS 67064 68107 . - 0 ID=cds-EGT82209.1;Parent=gene-GGE_0957;Dbxref=GeneID:17380438,InterPro:IPR001354,InterPro:IPR010196,InterPro:IPR013342,PFAM:PF01188,TIGRFAM:TIGR01927,NCBI_GP:EGT82209.1;Name=EGT82209.1;Ontology_term=GO:0009234,GO:0008152,GO:0003824,GO:0016836,GO:0000287;gbkey=CDS;gene=menC;go_function=catalytic activity|0003824||,hydro-lyase activity|0016836||,magnesium ion binding|0000287||;go_process=menaquinone biosynthetic process|0009234||,metabolic process|0008152||;locus_tag=GGE_0957;product=o-succinylbenzoate synthase;protein_id=EGT82209.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67127 68039 . - . ID=id-GGE_0957;Dbxref=InterPro:IPR010196;Note=HAMAP:MF_00470~menc_1~o-succinylbenzoic acid (osb) synthetase;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67127 67376 . - . ID=id-GGE_0957-2;Note=superfamily:SSF54826~enolase n-terminal domain-like;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67130 68018 . - . ID=id-GGE_0957-3;Note=multi-dom%3B label: PRK05105;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67133 67433 . - . ID=id-GGE_0957-4;Note=Gene3D:3.30.390.10;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67136 67943 . - . ID=id-GGE_0957-5;Note=specific~superfamily%3B label: enolase_like superfamily;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67145 67979 . - . ID=id-GGE_0957-6;Dbxref=InterPro:IPR010196,TIGRFAM:TIGR01927;Note=menc_gamma/gm+: o-succinylbenzoic acid~o-succinylbenzoic acid (osb) synthetase;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67439 67712 . - . ID=id-GGE_0957-7;Note=superfamily:SSF51604~enolase c-terminal domain-like;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67502 67613 . - . ID=id-GGE_0957-8;Note=Gene3D:3.20.20.120;gbkey=misc_feature;gene=menC;locus_tag=GGE_0957 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67100 67922 . + . ID=id-AFQR01000017.1:67100..67922;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67319 67511 . + . ID=id-AFQR01000017.1:67319..67511;Dbxref=InterPro:IPR013342,PFAM:PF01188;Note=mr_mle~mandelate racemase/muconate lactonizing enzyme;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 67448 67592 . + . ID=id-AFQR01000017.1:67448..67592;Dbxref=InterPro:IPR001354;Note=HMMPanther:PTHR13794~family not named~mandelate racemase/muconate lactonizing enzyme;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68069 68078 . + . ID=id-AFQR01000017.1:68069..68078;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68100 68109 . - . ID=id-AFQR01000017.1:68100..68109;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 68122 68979 . - . ID=gene-GGE_0958;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank CDS 68122 68979 . - 0 ID=cds-EGT82210.1;Parent=gene-GGE_0958;Dbxref=GeneID:1170915,InterPro:IPR001753,InterPro:IPR010198,InterPro:IPR014748,InterPro:IPR018376,PFAM:PF00378,TIGRFAM:TIGR01929,NCBI_GP:EGT82210.1;Name=EGT82210.1;Ontology_term=GO:0009234,GO:0008152,GO:0008935,GO:0003824;gbkey=CDS;gene=menB;go_function=1 4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||,catalytic activity|0003824||;go_process=menaquinone biosynthetic process|0009234||,metabolic process|0008152||;locus_tag=GGE_0958;product=1%2C4-Dihydroxy-2-naphthoyl-CoA synthase;protein_id=EGT82210.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68134 68968 . - . ID=id-GGE_0958;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68152 68950 . - . ID=id-GGE_0958-2;Note=multi-dom%3B label: PRK07396;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68176 68908 . - . ID=id-GGE_0958-3;Note=HMMPanther:PTHR11941~family not named;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68182 68743 . - . ID=id-GGE_0958-4;Note=Gene3D:3.90.226.10;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68188 68902 . - . ID=id-GGE_0958-5;Dbxref=InterPro:IPR010198,TIGRFAM:TIGR01929;Note=menb: naphthoate synthase~naphthoate synthase;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68197 68713 . - . ID=id-GGE_0958-6;Note=specific~superfamily%3B label: crotonase-like;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68227 68638 . - . ID=id-GGE_0958-7;Dbxref=InterPro:IPR001753,PFAM:PF00378;Note=ech~crotonase%2C core;gbkey=misc_feature;gene=menB;locus_tag=GGE_0958 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68185 68491 . + . ID=id-AFQR01000017.1:68185..68491;Dbxref=InterPro:IPR018376;Note=PatternScan:PS00166~enoyl_coa_hydratase~enoyl-coa hydratase/isomerase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 68281 68803 . + . ID=id-AFQR01000017.1:68281..68803;Dbxref=InterPro:IPR014748;Note=Gene3D:1.10.12.10~crontonase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69004 69013 . + . ID=id-AFQR01000017.1:69004..69013;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 69125 69691 . + . ID=gene-GGE_0959;Name=GGE_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0959 GCA_000222085.2|AFQR01000017.1 Genbank CDS 69125 69691 . + 0 ID=cds-EGT82211.1;Parent=gene-GGE_0959;Dbxref=GeneID:1175343,NCBI_GP:EGT82211.1;Name=EGT82211.1;Note=HI_0966;gbkey=CDS;locus_tag=GGE_0959;product=Hypothetical protein;protein_id=EGT82211.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69125 69689 . + . ID=id-GGE_0959;Note=BlastProDom:PD104362~y966_haein_p44085;gbkey=misc_feature;locus_tag=GGE_0959 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69714 69723 . - . ID=id-AFQR01000017.1:69714..69723;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69724 69733 . + . ID=id-AFQR01000017.1:69724..69733;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 69763 70026 . - . ID=gene-GGE_0960;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank CDS 69763 70026 . - 0 ID=cds-EGT82212.1;Parent=gene-GGE_0960;Dbxref=GeneID:81336020,InterPro:IPR002583,PFAM:PF01649,TIGRFAM:TIGR00029,NCBI_GP:EGT82212.1;Name=EGT82212.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsT;go_component=intracellular|0005622||,ribosome|0005840||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0960;product=30S ribosomal protein S20;protein_id=EGT82212.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69763 70024 . - . ID=id-GGE_0960;Dbxref=InterPro:IPR002583,TIGRFAM:TIGR00029;Note=s20: ribosomal protein s20~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69763 70021 . - . ID=id-GGE_0960-2;Dbxref=InterPro:IPR002583;Note=Gene3D:1.20.58.110~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69763 70018 . - . ID=id-GGE_0960-3;Dbxref=InterPro:IPR002583;Note=HAMAP:MF_00500~ribosomal_s20~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69769 70021 . - . ID=id-GGE_0960-4;Note=superfamily%3B label: Ribosomal_S20p superfamily;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69769 70015 . - . ID=id-GGE_0960-5;Dbxref=InterPro:IPR002583,PFAM:PF01649;Note=ribosomal_s20p~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69772 70015 . - . ID=id-GGE_0960-6;Dbxref=InterPro:IPR002583;Note=superfamily:SSF46992~ribosomal protein s20~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69802 69985 . - . ID=id-GGE_0960-7;Dbxref=InterPro:IPR002583;Note=BlastProDom:PD004231~rs20_haein_p44959~ribosomal protein s20;gbkey=misc_feature;gene=rpsT;locus_tag=GGE_0960 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 69820 69868 . + . ID=id-AFQR01000017.1:69820..69868;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 70293 71867 . + . ID=gene-GGE_0961;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank CDS 70293 71867 . + 0 ID=cds-EGT82213.1;Parent=gene-GGE_0961;Dbxref=GeneID:1171085,InterPro:IPR004268,PFAM:PF03023,TIGRFAM:TIGR01695,NCBI_GP:EGT82213.1;Name=EGT82213.1;gbkey=CDS;gene=mviN;locus_tag=GGE_0961;product=Virulence factor mviN;protein_id=EGT82213.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70305 71853 . + . ID=id-GGE_0961;Dbxref=InterPro:IPR004268,TIGRFAM:TIGR01695;Note=mvin: integral membrane protein mvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70323 71421 . + . ID=id-GGE_0961-2;Note=HMMPanther:PTHR11946:SF46~subfamily not named~HMMPanther:PTHR11946~family not named;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70383 71682 . + . ID=id-GGE_0961-3;Dbxref=InterPro:IPR004268,PFAM:PF03023;Note=mvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70383 71592 . + . ID=id-GGE_0961-4;Note=multi-dom%3B label: MVIN;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71229 71238 . + . ID=id-GGE_0961-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71652 71661 . + . ID=id-GGE_0961-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mviN;locus_tag=GGE_0961 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70326 71682 . - . ID=id-AFQR01000017.1:70326..71682;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70341 71793 . - . ID=id-AFQR01000017.1:70341..71793;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70344 70455 . - . ID=id-AFQR01000017.1:70344..70455;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70347 71562 . - . ID=id-AFQR01000017.1:70347..71562;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70350 70881 . - . ID=id-AFQR01000017.1:70350..70881;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70353 71487 . - . ID=id-AFQR01000017.1:70353..71487;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70353 71409 . - . ID=id-AFQR01000017.1:70353..71409;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70353 70887 . - . ID=id-AFQR01000017.1:70353..70887;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70353 70398 . - . ID=id-AFQR01000017.1:70353..70398;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70353 70377 . - . ID=id-AFQR01000017.1:70353..70377;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70359 70791 . - . ID=id-AFQR01000017.1:70359..70791;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71772 . - . ID=id-AFQR01000017.1:70362..71772;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71661 . - . ID=id-AFQR01000017.1:70362..71661;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71556 . - . ID=id-AFQR01000017.1:70362..71556;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71382 . - . ID=id-AFQR01000017.1:70362..71382;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71271 . - . ID=id-AFQR01000017.1:70362..71271;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71142 . - . ID=id-AFQR01000017.1:70362..71142;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 71031 . - . ID=id-AFQR01000017.1:70362..71031;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 70791 . - . ID=id-AFQR01000017.1:70362..70791;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 70704 . - . ID=id-AFQR01000017.1:70362..70704;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70362 70578 . - . ID=id-AFQR01000017.1:70362..70578;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70368 70719 . - . ID=id-AFQR01000017.1:70368..70719;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70374 71097 . - . ID=id-AFQR01000017.1:70374..71097;Dbxref=InterPro:IPR004268;Note=FPrintScan:PR01806~virfactrmvin~flagellin assembly%2C membrane protein mvin;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 70838 70847 . - . ID=id-AFQR01000017.1:70838..70847;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 71918 72844 . + . ID=gene-GGE_0962;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank CDS 71918 72844 . + 0 ID=cds-EGT82214.1;Parent=gene-GGE_0962;Dbxref=InterPro:IPR002606,InterPro:IPR004821,InterPro:IPR014729,InterPro:IPR015864,InterPro:IPR015865,InterPro:IPR023465,InterPro:IPR023468,PFAM:PF01687,PFAM:PF06574,PIR:PIRSF004491,TIGRFAM:TIGR00083,TIGRFAM:TIGR00125,NCBI_GP:EGT82214.1;Name=EGT82214.1;Ontology_term=GO:0009058,GO:0009231,GO:0003919,GO:0003824,GO:0008531;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||,catalytic activity|0003824||,riboflavin kinase activity|0008531||;go_process=biosynthetic process|0009058||,riboflavin biosynthetic process|0009231||;locus_tag=GGE_0962;product=Riboflavin biosynthesis protein ribF;protein_id=EGT82214.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71918 72842 . + . ID=id-GGE_0962;Dbxref=InterPro:IPR002606,PIR:PIRSF004491;Note=riboflavin biosynthesis protein ribf/ribc types~riboflavin kinase%2C bacterial;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71918 72839 . + . ID=id-GGE_0962-2;Dbxref=InterPro:IPR023468;Note=HMMPanther:PTHR22749~family not named~riboflavin kinase;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71924 72839 . + . ID=id-GGE_0962-3;Note=multi-dom%3B label: PRK05627;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71960 72404 . + . ID=id-GGE_0962-4;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71960 72380 . + . ID=id-GGE_0962-5;Dbxref=InterPro:IPR015864,PFAM:PF06574;Note=fad_syn~fad synthetase;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71969 72461 . + . ID=id-GGE_0962-6;Note=specific~superfamily%3B label: FAD_synthetase_N;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71969 72407 . + . ID=id-GGE_0962-7;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71969 72119 . + . ID=id-GGE_0962-8;Dbxref=InterPro:IPR004821,TIGRFAM:TIGR00125;Note=cyt_tran_rel: cytidyltransferase-related~cytidyltransferase-related;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 71972 72788 . + . ID=id-GGE_0962-9;Dbxref=InterPro:IPR002606,TIGRFAM:TIGR00083;Note=ribf: riboflavin biosynthesis protein ri~riboflavin kinase%2C bacterial;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72595 72604 . + . ID=id-GGE_0962-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ribF;locus_tag=GGE_0962 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72200 72209 . - . ID=id-AFQR01000017.1:72200..72209;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72290 72467 . - . ID=id-AFQR01000017.1:72290..72467;Dbxref=InterPro:IPR015865,PFAM:PF01687;Note=flavokinase~riboflavin kinase domain%2C bacterial/eukaryotic;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72293 72467 . - . ID=id-AFQR01000017.1:72293..72467;Note=superfamily%3B label: Flavokinase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72302 72458 . - . ID=id-AFQR01000017.1:72302..72458;Dbxref=InterPro:IPR023465;Note=Gene3D:2.40.30.30~riboflavin kinase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72323 72437 . - . ID=id-AFQR01000017.1:72323..72437;Dbxref=InterPro:IPR015865;Note=superfamily:SSF82114~riboflavin kinase-like~riboflavin kinase domain%2C bacterial/eukaryotic;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 72873 75698 . + . ID=gene-GGE_0963;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank CDS 72873 75698 . + 0 ID=cds-EGT82215.1;Parent=gene-GGE_0963;Dbxref=GeneID:166200213,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002301,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010663,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR023585,PFAM:PF00133,PFAM:PF06827,PFAM:PF08264,TIGRFAM:TIGR00392,NCBI_GP:EGT82215.1;Name=EGT82215.1;Ontology_term=GO:0006428,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0003824,GO:0004822,GO:0000166;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,catalytic activity|0003824||,isoleucine-tRNA ligase activity|0004822||,nucleotide binding|0000166||;go_process=isoleucyl-tRNA aminoacylation|0006428||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0963;product=Isoleucyl-tRNA synthetase;protein_id=EGT82215.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72882 75663 . + . ID=id-GGE_0963;Dbxref=InterPro:IPR023585;Note=HAMAP:MF_02002~ile_trna_synth_type1~isoleucyl-trna synthetase%2C type 1;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72882 74823 . + . ID=id-GGE_0963-2;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72885 75684 . + . ID=id-GGE_0963-3;Dbxref=InterPro:IPR023585;Note=HMMPanther:PTHR11946:SF9~isoleucyl trna synthetase~isoleucyl-trna synthetase%2C type 1~HMMPanther:PTHR11946~family not named;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72885 75663 . + . ID=id-GGE_0963-4;Note=multi-dom%3B label: ileS;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72918 75375 . + . ID=id-GGE_0963-5;Dbxref=InterPro:IPR002301,TIGRFAM:TIGR00392;Note=iles: isoleucine--trna ligase~isoleucyl-trna synthetase;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72960 74712 . + . ID=id-GGE_0963-6;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73023 73290 . + . ID=id-GGE_0963-7;Note=superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=ileS;locus_tag=GGE_0963 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72903 74559 . - . ID=id-AFQR01000017.1:72903..74559;Dbxref=InterPro:IPR002301;Note=FPrintScan:PR00984~trnasynthile~isoleucyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72909 73050 . - . ID=id-AFQR01000017.1:72909..73050;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72909 73029 . - . ID=id-AFQR01000017.1:72909..73029;Dbxref=InterPro:IPR002301;Note=FPrintScan:PR00984~trnasynthile~isoleucyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72915 74454 . - . ID=id-AFQR01000017.1:72915..74454;Dbxref=InterPro:IPR002301;Note=FPrintScan:PR00984~trnasynthile~isoleucyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72921 75246 . - . ID=id-AFQR01000017.1:72921..75246;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72921 74079 . - . ID=id-AFQR01000017.1:72921..74079;Dbxref=InterPro:IPR002301;Note=FPrintScan:PR00984~trnasynthile~isoleucyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72945 73593 . - . ID=id-AFQR01000017.1:72945..73593;Dbxref=InterPro:IPR002301;Note=FPrintScan:PR00984~trnasynthile~isoleucyl-trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72960 75576 . - . ID=id-AFQR01000017.1:72960..75576;Dbxref=InterPro:IPR010663,PFAM:PF06827;Note=zf-fpg_ilers~zinc finger%2C dna glycosylase/ap lyase/isoleucyl trna synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 72963 75576 . - . ID=id-AFQR01000017.1:72963..75576;Note=superfamily%3B label: zf-FPG_IleRS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73353 74931 . - . ID=id-AFQR01000017.1:73353..74931;Dbxref=InterPro:IPR013155,PFAM:PF08264;Note=anticodon_1~valyl/leucyl/isoleucyl-trna synthetase%2C class i%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73425 74796 . - . ID=id-AFQR01000017.1:73425..74796;Note=specific~superfamily%3B label: Anticodon_Ia_Ile_BEm;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73440 74799 . - . ID=id-AFQR01000017.1:73440..74799;Note=Gene3D:1.10.730.10;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73470 73497 . - . ID=id-AFQR01000017.1:73470..73497;Dbxref=InterPro:IPR009008;Note=Gene3D:3.90.740.10~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73476 73485 . - . ID=id-AFQR01000017.1:73476..73485;Dbxref=InterPro:IPR009008;Note=superfamily:SSF50677~valrs/ilers/leurs editing domain~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73551 74112 . - . ID=id-AFQR01000017.1:73551..74112;Note=specific~superfamily%3B label: IleRS_core;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73569 74094 . - . ID=id-AFQR01000017.1:73569..74094;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 73722 74832 . - . ID=id-AFQR01000017.1:73722..74832;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75719 75728 . + . ID=id-AFQR01000017.1:75719..75728;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75737 75746 . - . ID=id-AFQR01000017.1:75737..75746;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 75778 77334 . + . ID=gene-GGE_0964;Name=GGE_0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank CDS 75778 77334 . + 0 ID=cds-EGT82216.1;Parent=gene-GGE_0964;Dbxref=GeneID:1176474,InterPro:IPR000917,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884,NCBI_GP:EGT82216.1;Name=EGT82216.1;Note=HI_1005;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_0964;product=Putative phosphoethanolamine transferase;protein_id=EGT82216.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75778 77332 . + . ID=id-GGE_0964;Note=multi-dom%3B label: COG2194;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75817 75838 . + . ID=id-GGE_0964-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 76072 76264 . + . ID=id-GGE_0964-3;Note=HMMPanther:PTHR10342:SF35~iduronate 2-sulfatase~HMMPanther:PTHR10342~arylsulfatase;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 76402 76615 . + . ID=id-GGE_0964-4;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 76408 76651 . + . ID=id-GGE_0964-5;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 76408 76648 . + . ID=id-GGE_0964-6;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 76408 76603 . + . ID=id-GGE_0964-7;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature;locus_tag=GGE_0964 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75847 76189 . - . ID=id-AFQR01000017.1:75847..76189;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75847 76087 . - . ID=id-AFQR01000017.1:75847..76087;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75847 75991 . - . ID=id-AFQR01000017.1:75847..75991;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 75847 75904 . - . ID=id-AFQR01000017.1:75847..75904;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 77404 77919 . + . ID=gene-GGE_0965;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank CDS 77404 77919 . + 0 ID=cds-EGT82217.1;Parent=gene-GGE_0965;Dbxref=GeneID:166232867,InterPro:IPR001872,PFAM:PF01252,TIGRFAM:TIGR00077,NCBI_GP:EGT82217.1;Name=EGT82217.1;Ontology_term=GO:0006508,GO:0016020,GO:0004190;gbkey=CDS;gene=lspA;go_component=membrane|0016020||;go_function=aspartic-type endopeptidase activity|0004190||;go_process=proteolysis|0006508||;locus_tag=GGE_0965;product=Lipoprotein signal peptidase;protein_id=EGT82217.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77404 77890 . + . ID=id-GGE_0965;Dbxref=InterPro:IPR001872,TIGRFAM:TIGR00077;Note=lspa: signal peptidase ii~peptidase a8%2C signal peptidase ii;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77404 77863 . + . ID=id-GGE_0965-2;Note=superfamily%3B label: Peptidase_A8 superfamily;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77416 77872 . + . ID=id-GGE_0965-3;Dbxref=InterPro:IPR001872;Note=HAMAP:MF_00161~lspa~peptidase a8%2C signal peptidase ii;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77425 77473 . + . ID=id-GGE_0965-4;Note=transmembrane_regions;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77431 77830 . + . ID=id-GGE_0965-5;Note=multi-dom%3B label: PRK14787;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77440 77845 . + . ID=id-GGE_0965-6;Dbxref=InterPro:IPR001872,PFAM:PF01252;Note=peptidase_a8~peptidase a8%2C signal peptidase ii;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77900 77909 . + . ID=id-GGE_0965-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=lspA;locus_tag=GGE_0965 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77431 77554 . - . ID=id-AFQR01000017.1:77431..77554;Dbxref=InterPro:IPR001872;Note=FPrintScan:PR00781~liposigptase~peptidase a8%2C signal peptidase ii;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77443 77707 . - . ID=id-AFQR01000017.1:77443..77707;Dbxref=InterPro:IPR001872;Note=PatternScan:PS00855~spase_ii~peptidase a8%2C signal peptidase ii;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77446 77866 . - . ID=id-AFQR01000017.1:77446..77866;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77452 77698 . - . ID=id-AFQR01000017.1:77452..77698;Dbxref=InterPro:IPR001872;Note=FPrintScan:PR00781~liposigptase~peptidase a8%2C signal peptidase ii;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77455 77806 . - . ID=id-AFQR01000017.1:77455..77806;Dbxref=InterPro:IPR001872;Note=FPrintScan:PR00781~liposigptase~peptidase a8%2C signal peptidase ii;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77473 77788 . - . ID=id-AFQR01000017.1:77473..77788;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77473 77692 . - . ID=id-AFQR01000017.1:77473..77692;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77473 77590 . - . ID=id-AFQR01000017.1:77473..77590;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 77916 78860 . + . ID=gene-GGE_0966;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=GGE_0966 GCA_000222085.2|AFQR01000017.1 Genbank CDS 77916 78860 . + 0 ID=cds-EGT82218.1;Parent=gene-GGE_0966;Dbxref=GeneID:166217170,InterPro:IPR003451,PFAM:PF02401,TIGRFAM:TIGR00216,NCBI_GP:EGT82218.1;Name=EGT82218.1;Ontology_term=GO:0019288,GO:0055114;gbkey=CDS;gene=ispH;go_process=isopentenyl diphosphate biosynthetic process mevalonate-independent pathway|0019288||,oxidation-reduction process|0055114||;locus_tag=GGE_0966;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=EGT82218.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77916 78819 . + . ID=id-GGE_0966;Note=superfamily%3B label: LYTB superfamily;gbkey=misc_feature;gene=ispH;locus_tag=GGE_0966 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77916 78774 . + . ID=id-GGE_0966-2;Dbxref=InterPro:IPR003451;Note=HAMAP:MF_00191~isph~lytb protein;gbkey=misc_feature;gene=ispH;locus_tag=GGE_0966 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77922 78768 . + . ID=id-GGE_0966-3;Dbxref=InterPro:IPR003451,TIGRFAM:TIGR00216;Note=multi-dom~isph_lytb: 4-hydroxy-3-methylbut-2-enyl dip~lytb protein%3B label: ispH_lytB;gbkey=misc_feature;gene=ispH;locus_tag=GGE_0966 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 77925 78765 . + . ID=id-GGE_0966-4;Dbxref=InterPro:IPR003451,PFAM:PF02401;Note=lytb~lytb protein;gbkey=misc_feature;gene=ispH;locus_tag=GGE_0966 GCA_000222085.2|AFQR01000017.1 Genbank gene 79037 79384 . + . ID=gene-GGE_0967;Name=GGE_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0967 GCA_000222085.2|AFQR01000017.1 Genbank CDS 79037 79384 . + 0 ID=cds-EGT82219.1;Parent=gene-GGE_0967;Dbxref=InterPro:IPR004509,TIGRFAM:TIGR00426,NCBI_GP:EGT82219.1;Name=EGT82219.1;Note=HI_1008;gbkey=CDS;locus_tag=GGE_0967;product=putative competence protein ComEA%2C helix-hairpin-helix domain-containing protein;protein_id=EGT82219.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79118 79304 . + . ID=id-GGE_0967;Note=HMMPanther:PTHR21180~family not named;gbkey=misc_feature;locus_tag=GGE_0967 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79124 79295 . + . ID=id-GGE_0967-2;Note=Gene3D:1.10.150.280;gbkey=misc_feature;locus_tag=GGE_0967 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79190 79232 . + . ID=id-GGE_0967-3;Dbxref=InterPro:IPR004509,TIGRFAM:TIGR00426;Note=tigr00426: competence protein comea helix-h~competence protein comea%2C helix-hairpin-helix domain;gbkey=misc_feature;locus_tag=GGE_0967 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79196 79226 . + . ID=id-GGE_0967-4;Note=multi-dom%3B label: TIGR00426;gbkey=misc_feature;locus_tag=GGE_0967 GCA_000222085.2|AFQR01000017.1 Genbank gene 79644 80642 . + . ID=gene-GGE_0968;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank CDS 79644 80642 . + 0 ID=cds-EGT82220.1;Parent=gene-GGE_0968;Dbxref=GeneID:1174615,InterPro:IPR005948,InterPro:IPR005967,InterPro:IPR006059,InterPro:IPR006061,PFAM:PF01547,TIGRFAM:TIGR01254,TIGRFAM:TIGR01276,NCBI_GP:EGT82220.1;Name=EGT82220.1;Ontology_term=GO:0006810,GO:0030288,GO:0005524,GO:0042626,GO:0005215;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0968;product=Thiamine-binding periplasmic protein;protein_id=EGT82220.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79644 80640 . + . ID=id-GGE_0968;Note=multi-dom%3B label: TbpA;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79671 80616 . + . ID=id-GGE_0968-2;Dbxref=InterPro:IPR005967,TIGRFAM:TIGR01276;Note=thib: thiamin/thiamin pyrophosphate abc tran~proteobacterial thiamine abc transporter%2C periplasmic binding protein;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79710 80559 . + . ID=id-GGE_0968-3;Dbxref=InterPro:IPR005948,TIGRFAM:TIGR01254;Note=sfua: abc transporter periplasmic binding pr~thiamine abc transporter periplasmic binding protein;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79713 80574 . + . ID=id-GGE_0968-4;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79719 80559 . + . ID=id-GGE_0968-5;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79776 80346 . + . ID=id-GGE_0968-6;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80034 80043 . + . ID=id-GGE_0968-7;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=thiB;locus_tag=GGE_0968 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79673 79682 . - . ID=id-AFQR01000017.1:79673..79682;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79698 80016 . - . ID=id-AFQR01000017.1:79698..80016;Dbxref=InterPro:IPR006061;Note=PatternScan:PS01037~sbp_bacterial_1~bacterial extracellular solute-binding family 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 79818 80433 . - . ID=id-AFQR01000017.1:79818..80433;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80524 80533 . - . ID=id-AFQR01000017.1:80524..80533;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 80647 82263 . + . ID=gene-GGE_0969;Name=GGE_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank CDS 80647 82263 . + 0 ID=cds-EGT82221.1;Parent=gene-GGE_0969;Dbxref=GeneID:145638161,InterPro:IPR000515,InterPro:IPR005947,PFAM:PF00528,TIGRFAM:TIGR01253,NCBI_GP:EGT82221.1;Name=EGT82221.1;Note=ZP_01793771;Ontology_term=GO:0006810,GO:0009276,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0969;product=thiamin ABC transporter membrane component;protein_id=EGT82221.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80677 82201 . + . ID=id-GGE_0969;Dbxref=InterPro:IPR005947,TIGRFAM:TIGR01253;Note=multi-dom~thip: thiamine/thiamine pyrophosphate abc tr~thiamine abc transporter%2C permease protein%3B label: thiP;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80695 80716 . + . ID=id-GGE_0969-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80707 81391 . + . ID=id-GGE_0969-3;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80821 81265 . + . ID=id-GGE_0969-4;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80821 81247 . + . ID=id-GGE_0969-5;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80866 81226 . + . ID=id-GGE_0969-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 81499 81508 . + . ID=id-GGE_0969-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0969 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80683 81157 . - . ID=id-AFQR01000017.1:80683..81157;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80683 81112 . - . ID=id-AFQR01000017.1:80683..81112;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80689 81571 . - . ID=id-AFQR01000017.1:80689..81571;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80698 81511 . - . ID=id-AFQR01000017.1:80698..81511;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80707 82174 . - . ID=id-AFQR01000017.1:80707..82174;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 82039 . - . ID=id-AFQR01000017.1:80716..82039;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81865 . - . ID=id-AFQR01000017.1:80716..81865;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81754 . - . ID=id-AFQR01000017.1:80716..81754;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81652 . - . ID=id-AFQR01000017.1:80716..81652;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81526 . - . ID=id-AFQR01000017.1:80716..81526;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81385 . - . ID=id-AFQR01000017.1:80716..81385;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81259 . - . ID=id-AFQR01000017.1:80716..81259;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 81037 . - . ID=id-AFQR01000017.1:80716..81037;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 80926 . - . ID=id-AFQR01000017.1:80716..80926;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80716 80821 . - . ID=id-AFQR01000017.1:80716..80821;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 80725 81655 . - . ID=id-AFQR01000017.1:80725..81655;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 81106 81781 . - . ID=id-AFQR01000017.1:81106..81781;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 81118 81751 . - . ID=id-AFQR01000017.1:81118..81751;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 81235 81646 . - . ID=id-AFQR01000017.1:81235..81646;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 81361 81520 . - . ID=id-AFQR01000017.1:81361..81520;Note=Gene3D:1.10.3720.10;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 82247 82894 . + . ID=gene-GGE_0970;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank CDS 82247 82894 . + 0 ID=cds-EGT82222.1;Parent=gene-GGE_0970;Dbxref=GeneID:125987865,InterPro:IPR003439,InterPro:IPR005968,InterPro:IPR017871,PFAM:PF00005,TIGRFAM:TIGR01277,NCBI_GP:EGT82222.1;Name=EGT82222.1;Ontology_term=GO:0006810,GO:0009276,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;gene=thiQ;go_component=Gram-negative-bacterium-type cell wall|0009276||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transport|0006810||;locus_tag=GGE_0970;product=Thiamine import ATP-binding protein ThiQ;protein_id=EGT82222.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82247 82871 . + . ID=id-GGE_0970;Note=HMMPanther:PTHR24220:SF58~thiamine import atp-binding protein thiq~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82253 82889 . + . ID=id-GGE_0970-2;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82253 82886 . + . ID=id-GGE_0970-3;Dbxref=InterPro:IPR005968,TIGRFAM:TIGR01277;Note=thiq: thiamine abc transporter%2C atp-binding~abc transporter%2C thiamine%2C atp-binding protein;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82253 82883 . + . ID=id-GGE_0970-4;Note=multi-dom%3B label: thiQ;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82253 82868 . + . ID=id-GGE_0970-5;Note=superfamily~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82259 82862 . + . ID=id-GGE_0970-6;Dbxref=InterPro:IPR005968;Note=ProfileScan:PS51288~thiq~abc transporter%2C thiamine%2C atp-binding protein;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82301 82826 . + . ID=id-GGE_0970-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82364 82604 . + . ID=id-GGE_0970-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=thiQ;locus_tag=GGE_0970 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82292 82637 . - . ID=id-AFQR01000017.1:82292..82637;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 82992 83001 . - . ID=id-AFQR01000017.1:82992..83001;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 83015 84019 . + . ID=gene-GGE_0971;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank CDS 83015 84019 . + 0 ID=cds-EGT82223.1;Parent=gene-GGE_0971;Dbxref=GeneID:1168665,InterPro:IPR002684,InterPro:IPR007197,InterPro:IPR010722,InterPro:IPR013785,PFAM:PF04055,PFAM:PF06968,TIGRFAM:TIGR00433,NCBI_GP:EGT82223.1;Name=EGT82223.1;Ontology_term=GO:0009102,GO:0051186,GO:0008152,GO:0004076,GO:0003824,GO:0051536;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||;go_process=biotin biosynthetic process|0009102||,cofactor metabolic process|0051186||,metabolic process|0008152||;locus_tag=GGE_0971;product=Biotin synthase;protein_id=EGT82223.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83066 83945 . + . ID=id-GGE_0971;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83069 83942 . + . ID=id-GGE_0971-2;Dbxref=InterPro:IPR002684;Note=HAMAP:MF_01694~biob~biotin synthase;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83075 83936 . + . ID=id-GGE_0971-3;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83099 83903 . + . ID=id-GGE_0971-4;Dbxref=InterPro:IPR002684,TIGRFAM:TIGR00433;Note=multi-dom~biob: biotin synthase~biotin synthase%3B label: bioB;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83105 83930 . + . ID=id-GGE_0971-5;Note=HMMPanther:PTHR22976:SF1~biotin synthase~HMMPanther:PTHR22976~family not named;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83204 83576 . + . ID=id-GGE_0971-6;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83204 83480 . + . ID=id-GGE_0971-7;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=bioB;locus_tag=GGE_0971 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83054 83303 . - . ID=id-AFQR01000017.1:83054..83303;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 83294 83714 . - . ID=id-AFQR01000017.1:83294..83714;Dbxref=InterPro:IPR010722,PFAM:PF06968;Note=superfamily~bats~biotin/thiamin synthesis-associated protein%3B label: BATS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 84073 84750 . - . ID=gene-GGE_0972;Name=GGE_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0972 GCA_000222085.2|AFQR01000017.1 Genbank CDS 84073 84750 . - 0 ID=cds-EGT82224.1;Parent=gene-GGE_0972;Dbxref=GeneID:315634240,InterPro:IPR008517,PFAM:PF05643,NCBI_GP:EGT82224.1;Name=EGT82224.1;Note=ZP_07889527;gbkey=CDS;locus_tag=GGE_0972;product=lipoprotein;protein_id=EGT82224.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84073 84130 . - . ID=id-GGE_0972;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0972 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84085 84715 . - . ID=id-GGE_0972-2;Note=superfamily%3B label: DUF799 superfamily;gbkey=misc_feature;locus_tag=GGE_0972 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84091 84691 . - . ID=id-GGE_0972-3;Dbxref=InterPro:IPR008517,PFAM:PF05643;Note=duf799~protein of unknown function duf799;gbkey=misc_feature;locus_tag=GGE_0972 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84115 84535 . + . ID=id-AFQR01000017.1:84115..84535;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 84747 85157 . - . ID=gene-GGE_0973;Name=GGE_0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0973 GCA_000222085.2|AFQR01000017.1 Genbank CDS 84747 85157 . - 0 ID=cds-EGT82225.1;Parent=gene-GGE_0973;Dbxref=GeneID:315634241,InterPro:IPR014508,InterPro:IPR019734,PIR:PIRSF020555,NCBI_GP:EGT82225.1;Name=EGT82225.1;Note=ZP_07889528;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_0973;product=tyrosine recombinase XerC;protein_id=EGT82225.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84747 85107 . - . ID=id-GGE_0973;Dbxref=InterPro:IPR014508,PIR:PIRSF020555;Note=uncharacterised conserved protein with tpr-like repeats~uncharacterised protein family%2C tpr-like repeat-containing;gbkey=misc_feature;locus_tag=GGE_0973 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84747 84804 . - . ID=id-GGE_0973-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0973 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84813 85035 . - . ID=id-GGE_0973-3;Note=superfamily%3B label: COG4259 superfamily;gbkey=misc_feature;locus_tag=GGE_0973 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84774 85131 . + . ID=id-AFQR01000017.1:84774..85131;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84780 84780 . + . ID=id-AFQR01000017.1:84780..84780;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 84849 84960 . + . ID=id-AFQR01000017.1:84849..84960;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 85168 85836 . - . ID=gene-GGE_0974;Name=GGE_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank CDS 85168 85836 . - 0 ID=cds-EGT82226.1;Parent=gene-GGE_0974;Dbxref=GeneID:315634242,InterPro:IPR005534,InterPro:IPR007195,PFAM:PF03783,NCBI_GP:EGT82226.1;Name=EGT82226.1;Note=ZP_07889529;Ontology_term=GO:0015031,GO:0030288,GO:0042597;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||,periplasmic space|0042597||;go_process=protein transport|0015031||;locus_tag=GGE_0974;product=CsgG family protein;protein_id=EGT82226.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85168 85225 . - . ID=id-GGE_0974;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85273 85732 . - . ID=id-GGE_0974-2;Note=superfamily%3B label: CsgG superfamily;gbkey=misc_feature;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85276 85720 . - . ID=id-GGE_0974-3;Dbxref=InterPro:IPR005534,PFAM:PF03783;Note=csgg~curli production assembly/transport component csgg;gbkey=misc_feature;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85279 85483 . - . ID=id-GGE_0974-4;Dbxref=InterPro:IPR007195;Note=superfamily:SSF52964~tolb domain~tolb;gbkey=misc_feature;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85300 85456 . - . ID=id-GGE_0974-5;Dbxref=InterPro:IPR007195;Note=Gene3D:3.40.50.10070~tolb;gbkey=misc_feature;locus_tag=GGE_0974 GCA_000222085.2|AFQR01000017.1 Genbank gene 85899 87896 . - . ID=gene-GGE_0975;Name=tktA;gbkey=Gene;gene=tktA;gene_biotype=protein_coding;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank CDS 85899 87896 . - 0 ID=cds-EGT82227.1;Parent=gene-GGE_0975;Dbxref=GeneID:1174714,InterPro:IPR005474,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005478,InterPro:IPR009014,InterPro:IPR015941,InterPro:IPR020826,PFAM:PF00456,PFAM:PF02779,PFAM:PF02780,TIGRFAM:TIGR00232,NCBI_GP:EGT82227.1;Name=EGT82227.1;Ontology_term=GO:0008152,GO:0003824,GO:0004802;gbkey=CDS;gene=tktA;go_function=catalytic activity|0003824||,transketolase activity|0004802||;go_process=metabolic process|0008152||;locus_tag=GGE_0975;product=Transketolase;protein_id=EGT82227.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85899 87894 . - . ID=id-GGE_0975;Note=multi-dom%3B label: PRK12753;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85899 86901 . - . ID=id-GGE_0975-2;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85911 87885 . - . ID=id-GGE_0975-3;Note=HMMPanther:PTHR11624:SF38~subfamily not named~HMMPanther:PTHR11624~family not named;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85911 86892 . - . ID=id-GGE_0975-4;Dbxref=InterPro:IPR005474,PFAM:PF00456;Note=transketolase_n~transketolase;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85914 87882 . - . ID=id-GGE_0975-5;Dbxref=InterPro:IPR005478,TIGRFAM:TIGR00232;Note=tktlase_bact: transketolase~transketolase%2C bacterial-like;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85914 86862 . - . ID=id-GGE_0975-6;Note=Gene3D:3.40.50.970;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85926 86697 . - . ID=id-GGE_0975-7;Note=specific~superfamily%3B label: TPP_enzyme superfamily;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85935 85962 . - . ID=id-GGE_0975-8;Dbxref=InterPro:IPR005474;Note=PatternScan:PS00801~transketolase_1~transketolase;gbkey=misc_feature;gene=tktA;locus_tag=GGE_0975 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85938 86835 . + . ID=id-AFQR01000017.1:85938..86835;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 85950 87306 . + . ID=id-AFQR01000017.1:85950..87306;Dbxref=InterPro:IPR020826;Note=PatternScan:PS00802~transketolase_2~transketolase binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86241 87531 . + . ID=id-AFQR01000017.1:86241..87531;Dbxref=InterPro:IPR005476,PFAM:PF02780;Note=transketolase_c~transketolase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86247 87525 . + . ID=id-AFQR01000017.1:86247..87525;Note=superfamily%3B label: Transketolase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86277 87519 . + . ID=id-AFQR01000017.1:86277..87519;Dbxref=InterPro:IPR015941;Note=Gene3D:3.40.50.920~transketolase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86301 87492 . + . ID=id-AFQR01000017.1:86301..87492;Dbxref=InterPro:IPR009014;Note=superfamily:SSF52922~tk c-terminal domain-like~transketolase/pyruvate-ferredoxin oxidoreductase%2C domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86391 86976 . + . ID=id-AFQR01000017.1:86391..86976;Note=specific~superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86418 86961 . + . ID=id-AFQR01000017.1:86418..86961;Dbxref=InterPro:IPR005475,PFAM:PF02779;Note=transket_pyr~transketolase-like%2C pyrimidine-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86490 86898 . + . ID=id-AFQR01000017.1:86490..86898;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 86520 86883 . + . ID=id-AFQR01000017.1:86520..86883;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 88008 88646 . - . ID=gene-GGE_0976;Name=GGE_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0976 GCA_000222085.2|AFQR01000017.1 Genbank CDS 88008 88646 . - 0 ID=cds-EGT82228.1;Parent=gene-GGE_0976;Dbxref=GeneID:301154842,InterPro:IPR019305,PFAM:PF10144,NCBI_GP:EGT82228.1;Name=EGT82228.1;Note=CBW14305;gbkey=CDS;locus_tag=GGE_0976;product=Hypothetical protein;protein_id=EGT82228.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88017 88557 . - . ID=id-GGE_0976;Note=superfamily%3B label: SMP_2 superfamily;gbkey=misc_feature;locus_tag=GGE_0976 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88020 88596 . - . ID=id-GGE_0976-2;Dbxref=InterPro:IPR019305,PFAM:PF10144;Note=smp_2~uncharacterised protein family smp;gbkey=misc_feature;locus_tag=GGE_0976 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88047 88068 . - . ID=id-GGE_0976-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0976 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88077 88476 . + . ID=id-AFQR01000017.1:88077..88476;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 88703 89647 . + . ID=gene-GGE_0977;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank CDS 88703 89647 . + 0 ID=cds-EGT82229.1;Parent=gene-GGE_0977;Dbxref=GeneID:1173428,InterPro:IPR004469,InterPro:IPR005834,InterPro:IPR006383,InterPro:IPR023190,InterPro:IPR023214,PFAM:PF00702,TIGRFAM:TIGR00338,TIGRFAM:TIGR01488,NCBI_GP:EGT82229.1;Name=EGT82229.1;Ontology_term=GO:0006564,GO:0008152,GO:0003824,GO:0016791,GO:0004647;gbkey=CDS;gene=serB;go_function=catalytic activity|0003824||,phosphatase activity|0016791||,phosphoserine phosphatase activity|0004647||;go_process=L-serine biosynthetic process|0006564||,metabolic process|0008152||;locus_tag=GGE_0977;product=Phosphoserine phosphatase;protein_id=EGT82229.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88703 89645 . + . ID=id-GGE_0977;Note=multi-dom%3B label: serB;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88851 88860 . + . ID=id-GGE_0977-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88958 89351 . + . ID=id-GGE_0977-3;Note=HMMPanther:PTHR10000~phosphoserine phosphatase;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88973 89360 . + . ID=id-GGE_0977-4;Dbxref=InterPro:IPR004469,TIGRFAM:TIGR00338;Note=serb: phosphoserine phosphatase serb~phosphoserine phosphatase serb;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89003 89330 . + . ID=id-GGE_0977-5;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89018 89219 . + . ID=id-GGE_0977-6;Dbxref=InterPro:IPR006383,TIGRFAM:TIGR01488;Note=had-sf-ib: had phosphoserine phosphatase-li~had-superfamily hydrolase%2C subfamily ib%2C pspase-like;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89021 89219 . + . ID=id-GGE_0977-7;Dbxref=InterPro:IPR005834,PFAM:PF00702;Note=hydrolase~haloacid dehalogenase-like hydrolase;gbkey=misc_feature;gene=serB;locus_tag=GGE_0977 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88753 88762 . - . ID=id-AFQR01000017.1:88753..88762;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 88874 89051 . - . ID=id-AFQR01000017.1:88874..89051;Dbxref=InterPro:IPR023190;Note=Gene3D:1.10.150.210~phosphoserine phosphatase%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89012 89030 . - . ID=id-AFQR01000017.1:89012..89030;Note=superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89039 89216 . - . ID=id-AFQR01000017.1:89039..89216;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89111 89222 . - . ID=id-AFQR01000017.1:89111..89222;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89605 89614 . - . ID=id-AFQR01000017.1:89605..89614;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 89665 90156 . + . ID=gene-GGE_0978;Name=GGE_0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0978 GCA_000222085.2|AFQR01000017.1 Genbank CDS 89665 90156 . + 0 ID=cds-EGT82230.1;Parent=gene-GGE_0978;Dbxref=GeneID:166228772,InterPro:IPR007551,PFAM:PF04461,NCBI_GP:EGT82230.1;Name=EGT82230.1;Note=CGSHiGG_08790;gbkey=CDS;locus_tag=GGE_0978;product=UPF0234 protein;protein_id=EGT82230.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89665 90154 . + . ID=id-GGE_0978;Dbxref=InterPro:IPR007551;Note=superfamily~HAMAP:MF_00632~upf0234~protein of unknown function duf520%3B label: DUF520 superfamily;gbkey=misc_feature;locus_tag=GGE_0978 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89665 90151 . + . ID=id-GGE_0978-2;Dbxref=InterPro:IPR007551,PFAM:PF04461;Note=duf520~protein of unknown function duf520;gbkey=misc_feature;locus_tag=GGE_0978 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89671 89929 . + . ID=id-GGE_0978-3;Note=superfamily:SSF89963~yajq-like;gbkey=misc_feature;locus_tag=GGE_0978 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89692 89932 . + . ID=id-GGE_0978-4;Note=Gene3D:3.30.70.990;gbkey=misc_feature;locus_tag=GGE_0978 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89863 89959 . - . ID=id-AFQR01000017.1:89863..89959;Note=Gene3D:3.30.70.860;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 89887 89935 . - . ID=id-AFQR01000017.1:89887..89935;Note=superfamily:SSF89963~yajq-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90384 90393 . - . ID=id-AFQR01000017.1:90384..90393;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 90452 91399 . + . ID=gene-GGE_0979;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank CDS 90452 91399 . + 0 ID=cds-EGT82231.1;Parent=gene-GGE_0979;Dbxref=GeneID:1169019,InterPro:IPR002523,InterPro:IPR004488,PFAM:PF01544,TIGRFAM:TIGR00383,NCBI_GP:EGT82231.1;Name=EGT82231.1;Ontology_term=GO:0006824,GO:0015693,GO:0030001,GO:0055085,GO:0016020,GO:0015087,GO:0015095,GO:0046873;gbkey=CDS;gene=corA;go_component=membrane|0016020||;go_function=cobalt ion transmembrane transporter activity|0015087||,magnesium ion transmembrane transporter activity|0015095||,metal ion transmembrane transporter activity|0046873||;go_process=cobalt ion transport|0006824||,magnesium ion transport|0015693||,metal ion transport|0030001||,transmembrane transport|0055085||;locus_tag=GGE_0979;product=Magnesium transport protein CorA;protein_id=EGT82231.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90452 91397 . + . ID=id-GGE_0979;Note=superfamily~multi-dom%3B label: CorA;gbkey=misc_feature;gene=corA;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90452 91214 . + . ID=id-GGE_0979-2;Note=superfamily:SSF143865~cora soluble domain-like;gbkey=misc_feature;gene=corA;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90458 91394 . + . ID=id-GGE_0979-3;Dbxref=InterPro:IPR004488,TIGRFAM:TIGR00383;Note=cora: magnesium and cobalt transport protein~magnesium/cobalt transport protein cora;gbkey=misc_feature;gene=corA;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90515 91337 . + . ID=id-GGE_0979-4;Note=HMMPanther:PTHR21535~family not named;gbkey=misc_feature;gene=corA;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90524 91316 . + . ID=id-GGE_0979-5;Dbxref=InterPro:IPR002523,PFAM:PF01544;Note=cora~mg2+ transporter protein%2C cora-like;gbkey=misc_feature;gene=corA;locus_tag=GGE_0979 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90515 91319 . - . ID=id-AFQR01000017.1:90515..91319;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90518 90872 . - . ID=id-AFQR01000017.1:90518..90872;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90521 91223 . - . ID=id-AFQR01000017.1:90521..91223;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90644 91202 . - . ID=id-AFQR01000017.1:90644..91202;Note=superfamily:SSF144083~magnesium transport protein cora%2C transmembrane region;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 90683 91169 . - . ID=id-AFQR01000017.1:90683..91169;Note=Gene3D:1.20.58.340;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 91396 91944 . + . ID=gene-GGE_0980;Name=GGE_0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0980 GCA_000222085.2|AFQR01000017.1 Genbank CDS 91396 91944 . + 0 ID=cds-EGT82232.1;Parent=gene-GGE_0980;Dbxref=GeneID:1723864,InterPro:IPR003425,PFAM:PF02325,NCBI_GP:EGT82232.1;Name=EGT82232.1;Note=HI_1036;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0980;product=putative Hypothetical protein family Ycf19;protein_id=EGT82232.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91417 91465 . + . ID=id-GGE_0980;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0980 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91429 91612 . + . ID=id-GGE_0980-2;Note=superfamily%3B label: YGGT superfamily;gbkey=misc_feature;locus_tag=GGE_0980 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91432 91609 . + . ID=id-GGE_0980-3;Dbxref=InterPro:IPR003425,PFAM:PF02325;Note=yggt~uncharacterised protein family ycf19;gbkey=misc_feature;locus_tag=GGE_0980 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91441 91885 . - . ID=id-AFQR01000017.1:91441..91885;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91441 91654 . - . ID=id-AFQR01000017.1:91441..91654;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91465 91870 . - . ID=id-AFQR01000017.1:91465..91870;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91465 91690 . - . ID=id-AFQR01000017.1:91465..91690;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91465 91603 . - . ID=id-AFQR01000017.1:91465..91603;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91561 91720 . - . ID=id-AFQR01000017.1:91561..91720;Note=superfamily%3B label: YGGT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91591 91717 . - . ID=id-AFQR01000017.1:91591..91717;Dbxref=InterPro:IPR003425,PFAM:PF02325;Note=yggt~uncharacterised protein family ycf19;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91963 92680 . + . ID=id-GeneID:43582;Dbxref=GeneID:43582;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91964 92680 . + . ID=id-GeneID:43592-2;Dbxref=GeneID:43592;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91970 92643 . + . ID=id-GeneID:43583-3;Dbxref=GeneID:43583;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91973 92680 . + . ID=id-GeneID:43580-4;Dbxref=GeneID:43580,GeneID:43581;Note=ISDB hit~ISDB hit~VFDB hit~VFDB:VFG0695~VFDB hit~VFDB:VFG0707;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 91974 92674 . + . ID=id-AFQR01000017.1:91974..92674;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 92180 92246 . - . ID=id-AFQR01000017.1:92180..92246;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 93070 94386 . - . ID=gene-GGE_0981;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank CDS 93070 94386 . - 0 ID=cds-EGT82233.1;Parent=gene-GGE_0981;Dbxref=GeneID:81336651,InterPro:IPR001566,InterPro:IPR002792,InterPro:IPR010280,InterPro:IPR016027,PFAM:PF01938,PFAM:PF05958,TIGRFAM:TIGR00479,NCBI_GP:EGT82233.1;Name=EGT82233.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rumA;go_function=RNA binding|0003723||,RNA methyltransferase activity|0008173||;go_process=RNA processing|0006396||;locus_tag=GGE_0981;product=23S rRNA uracil-5--methyltransferase RumA;protein_id=EGT82233.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93076 94372 . - . ID=id-GGE_0981;Note=multi-dom%3B label: rumA;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93094 93253 . - . ID=id-GGE_0981-2;Dbxref=InterPro:IPR002792;Note=ProfileScan:PS50926~tram~deoxyribonuclease/rho motif-related tram;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93100 93244 . - . ID=id-GGE_0981-3;Note=superfamily%3B label: TRAM superfamily;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93106 93235 . - . ID=id-GGE_0981-4;Dbxref=InterPro:IPR002792,PFAM:PF01938;Note=tram~deoxyribonuclease/rho motif-related tram;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93112 94345 . - . ID=id-GGE_0981-5;Dbxref=InterPro:IPR001566;Note=HAMAP:MF_01010~23srrna_methyltr_ruma~23s rrna methyltransferase/ruma;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93115 93250 . - . ID=id-GGE_0981-6;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93130 93139 . - . ID=id-GGE_0981-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93142 94291 . - . ID=id-GGE_0981-8;Dbxref=InterPro:IPR001566,TIGRFAM:TIGR00479;Note=ruma: 23s rrna (uracil-5-)-methyltransferase~23s rrna methyltransferase/ruma;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93166 94285 . - . ID=id-GGE_0981-9;Note=HMMPanther:PTHR11061:SF2~rna m5u methyltransferase~HMMPanther:PTHR11061~family not named;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93295 94162 . - . ID=id-GGE_0981-10;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93433 93442 . - . ID=id-GGE_0981-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93454 93994 . - . ID=id-GGE_0981-12;Dbxref=InterPro:IPR010280,PFAM:PF05958;Note=trna_u5-meth_tr~(uracil-5)-methyltransferase;gbkey=misc_feature;gene=rumA;locus_tag=GGE_0981 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93103 94330 . + . ID=id-AFQR01000017.1:93103..94330;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01231~trma_2~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93163 94177 . + . ID=id-AFQR01000017.1:93163..94177;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01230~trma_1~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93370 93958 . + . ID=id-AFQR01000017.1:93370..93958;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93601 93847 . + . ID=id-AFQR01000017.1:93601..93847;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 93830 93839 . + . ID=id-AFQR01000017.1:93830..93839;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 94386 95096 . - . ID=gene-GGE_0982;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank CDS 94386 95096 . - 0 ID=cds-EGT82234.1;Parent=gene-GGE_0982;Dbxref=GeneID:1172897,InterPro:IPR001164,InterPro:IPR003717,InterPro:IPR016027,InterPro:IPR022572,PFAM:PF02565,PFAM:PF11967,TIGRFAM:TIGR00613,NCBI_GP:EGT82234.1;Name=EGT82234.1;Ontology_term=GO:0006310,GO:0006281,GO:0032312,GO:0008060,GO:0008270;gbkey=CDS;gene=recO;go_function=ARF GTPase activator activity|0008060||,zinc ion binding|0008270||;go_process=DNA recombination|0006310||,DNA repair|0006281||,regulation of ARF GTPase activity|0032312||;locus_tag=GGE_0982;product=DNA repair protein recO;protein_id=EGT82234.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94392 95076 . - . ID=id-GGE_0982;Dbxref=InterPro:IPR003717;Note=HAMAP:MF_00201~reco~recombination protein o%2C reco;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94392 95073 . - . ID=id-GGE_0982-2;Note=multi-dom%3B label: recO;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94392 94620 . - . ID=id-GGE_0982-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94392 94611 . - . ID=id-GGE_0982-4;Note=superfamily%3B label: RecO_N superfamily;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94398 95070 . - . ID=id-GGE_0982-5;Dbxref=InterPro:IPR003717,TIGRFAM:TIGR00613;Note=reco: dna repair protein reco~recombination protein o%2C reco;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94401 94605 . - . ID=id-GGE_0982-6;Dbxref=InterPro:IPR022572,PFAM:PF11967;Note=reco_n~dna replication/recombination mediator reco;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94635 94818 . - . ID=id-GGE_0982-7;Dbxref=InterPro:IPR003717,PFAM:PF02565;Note=reco_c~recombination protein o%2C reco;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94644 94809 . - . ID=id-GGE_0982-8;Note=superfamily%3B label: RecO_C superfamily;gbkey=misc_feature;gene=recO;locus_tag=GGE_0982 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94623 94623 . + . ID=id-AFQR01000017.1:94623..94623;Dbxref=InterPro:IPR001164;Note=superfamily:SSF57863~arfgap/reco-like zinc finger~arf gtpase activating protein;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 94834 94843 . + . ID=id-AFQR01000017.1:94834..94843;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 95099 95503 . - . ID=gene-GGE_0983;Name=GGE_0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0983 GCA_000222085.2|AFQR01000017.1 Genbank CDS 95099 95503 . - 0 ID=cds-EGT82235.1;Parent=gene-GGE_0983;Dbxref=GeneID:148827478,InterPro:IPR012097,PIR:PIRSF007352,NCBI_GP:EGT82235.1;Name=EGT82235.1;Note=YP_001292231;gbkey=CDS;locus_tag=GGE_0983;product=opacity associated protein OapB;protein_id=EGT82235.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95099 95501 . - . ID=id-GGE_0983;Dbxref=InterPro:IPR012097,PIR:PIRSF007352;Note=opacity-associated protein b~opacity-associated protein b;gbkey=misc_feature;locus_tag=GGE_0983 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95466 95475 . + . ID=id-AFQR01000017.1:95466..95475;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 95551 96894 . - . ID=gene-GGE_0984;Name=oapA;gbkey=Gene;gene=oapA;gene_biotype=protein_coding;locus_tag=GGE_0984 GCA_000222085.2|AFQR01000017.1 Genbank CDS 95551 96894 . - 0 ID=cds-EGT82236.1;Parent=gene-GGE_0984;Dbxref=InterPro:IPR007340,InterPro:IPR013731,PFAM:PF04225,PFAM:PF08525,NCBI_GP:EGT82236.1;Name=EGT82236.1;gbkey=CDS;gene=oapA;locus_tag=GGE_0984;product=Opacity-associated protein oapA;protein_id=EGT82236.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 96100 96346 . - . ID=id-GGE_0984;Note=multi-dom%3B label: OapA;gbkey=misc_feature;gene=oapA;locus_tag=GGE_0984 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95599 96613 . + . ID=id-AFQR01000017.1:95599..96613;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95602 96466 . + . ID=id-AFQR01000017.1:95602..96466;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95605 95962 . + . ID=id-AFQR01000017.1:95605..95962;Note=transmembrane_regions~seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95653 95926 . + . ID=id-AFQR01000017.1:95653..95926;Dbxref=InterPro:IPR013731,PFAM:PF08525;Note=oapa_n~opacity-associated protein a;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95674 96331 . + . ID=id-AFQR01000017.1:95674..96331;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95785 96661 . + . ID=id-AFQR01000017.1:95785..96661;Note=superfamily%3B label: OapA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 95794 96652 . + . ID=id-AFQR01000017.1:95794..96652;Dbxref=InterPro:IPR007340,PFAM:PF04225;Note=oapa~opacity-associated protein a;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 96224 96903 . + . ID=id-AFQR01000017.1:96224..96903;Note=VFDB hit~VFDB:VFG0334;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 97002 98018 . - . ID=gene-GGE_0985;Name=GGE_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank CDS 97002 98018 . - 0 ID=cds-EGT82237.1;Parent=gene-GGE_0985;Dbxref=GeneID:1176350,InterPro:IPR003739,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR022462,PFAM:PF04055,PIR:PIRSF004911,TIGRFAM:TIGR00238,TIGRFAM:TIGR03821,NCBI_GP:EGT82237.1;Name=EGT82237.1;Note=HI_0329;Ontology_term=GO:0008152,GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||,iron-sulfur cluster binding|0051536||;go_process=metabolic process|0008152||;locus_tag=GGE_0985;product=putative radical SAM;protein_id=EGT82237.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97002 98016 . - . ID=id-GGE_0985;Dbxref=InterPro:IPR003739,PIR:PIRSF004911;Note=l-lysine 2%2C3-aminomutase~conserved hyprothetical protein chp00238%2C kama;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97002 97989 . - . ID=id-GGE_0985-2;Dbxref=InterPro:IPR003739,TIGRFAM:TIGR00238;Note=tigr00238: kama family protein~conserved hyprothetical protein chp00238%2C kama;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97008 98013 . - . ID=id-GGE_0985-3;Note=multi-dom%3B label: KamA;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97050 97965 . - . ID=id-GGE_0985-4;Dbxref=InterPro:IPR022462,TIGRFAM:TIGR03821;Note=abla_like_1: lysine-2%2C3-aminomutase-relat~lysine-2%2C3-aminomutase-like;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97308 97674 . - . ID=id-GGE_0985-5;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97359 97581 . - . ID=id-GGE_0985-6;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;locus_tag=GGE_0985 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97338 97341 . + . ID=id-AFQR01000017.1:97338..97341;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 97356 97362 . + . ID=id-AFQR01000017.1:97356..97362;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank gene 98056 98622 . + . ID=gene-GGE_0986;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank CDS 98056 98622 . + 0 ID=cds-EGT82238.1;Parent=gene-GGE_0986;Dbxref=GeneID:13431438,InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR011768,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,InterPro:IPR014722,InterPro:IPR015365,InterPro:IPR016027,InterPro:IPR020599,PFAM:PF01132,PFAM:PF08207,PFAM:PF09285,PIR:PIRSF005901,TIGRFAM:TIGR00038,NCBI_GP:EGT82238.1;Name=EGT82238.1;Ontology_term=GO:0043043,GO:0006414,GO:0005737,GO:0003746;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||;go_function=translation elongation factor activity|0003746||;go_process=peptide biosynthetic process|0043043||,translational elongation|0006414||;locus_tag=GGE_0986;product=Elongation factor P;protein_id=EGT82238.1;transl_table=11 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98056 98620 . + . ID=id-GGE_0986;Dbxref=InterPro:IPR020599,PIR:PIRSF005901;Note=translation elongation factor p~translation elongation factor p/yeip;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98056 98251 . + . ID=id-GGE_0986-2;Dbxref=InterPro:IPR008991;Note=superfamily:SSF50104~translation proteins sh3-like domain~translation protein sh3-like;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98065 98614 . + . ID=id-GGE_0986-3;Note=multi-dom%3B label: PRK00529;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98065 98611 . + . ID=id-GGE_0986-4;Dbxref=InterPro:IPR011768;Note=HAMAP:MF_00141~ef_p~translation elongation factor p;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98068 98608 . + . ID=id-GGE_0986-5;Dbxref=InterPro:IPR011768,TIGRFAM:TIGR00038;Note=efp: translation elongation factor p~translation elongation factor p;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98068 98242 . + . ID=id-GGE_0986-6;Dbxref=InterPro:IPR014722;Note=Gene3D:2.30.30.30~translation protein sh3-like%2C subgroup;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98071 98230 . + . ID=id-GGE_0986-7;Dbxref=InterPro:IPR013185,PFAM:PF08207;Note=superfamily~efp_n~translation elongation factor%2C kow-like%3B label: EFP_N superfamily;gbkey=misc_feature;gene=efp;locus_tag=GGE_0986 GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98116 98512 . - . ID=id-AFQR01000017.1:98116..98512;Dbxref=InterPro:IPR013852;Note=PatternScan:PS01275~efp~translation elongation factor p/yeip%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98215 98269 . - . ID=id-AFQR01000017.1:98215..98269;Dbxref=InterPro:IPR001059,PFAM:PF01132;Note=efp~translation elongation factor p/yeip%2C central;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98224 98449 . - . ID=id-AFQR01000017.1:98224..98449;Dbxref=InterPro:IPR015365,PFAM:PF09285;Note=specific~superfamily~elong-fact-p_c~elongation factor p%3B label: S1_EF-P_repeat_2;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98230 98446 . - . ID=id-AFQR01000017.1:98230..98446;Dbxref=InterPro:IPR012340,InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like~Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98230 98269 . - . ID=id-AFQR01000017.1:98230..98269;Note=specific~superfamily%3B label: S1_EF-P_repeat_1;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98245 98257 . - . ID=id-AFQR01000017.1:98245..98257;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98248 98254 . - . ID=id-AFQR01000017.1:98248..98254;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000017.1 Genbank sequence_feature 98636 98645 . + . ID=id-AFQR01000017.1:98636..98645;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000016.1 1 41706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000016.1 Genbank region 1 41706 . + . ID=AFQR01000016.1:1..41706;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000016.1 Genbank gene 154 900 . + . ID=gene-GGE_0842;Name=GGE_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0842 GCA_000222085.2|AFQR01000016.1 Genbank CDS 154 900 . + 0 ID=cds-EGT82266.1;Parent=gene-GGE_0842;Dbxref=InterPro:IPR002052,InterPro:IPR012327,InterPro:IPR023095,PFAM:PF02086,NCBI_GP:EGT82266.1;Name=EGT82266.1;Note=Hypothetical d12 class N6 adenine-specific DNA methyltransferase;Ontology_term=GO:0006306,GO:0032259,GO:0008168,GO:0003676,GO:0009007;gbkey=CDS;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_0842;product=putative d12 class N6 adenine-specific DNA methyltransferase;protein_id=EGT82266.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 160 892 . + . ID=id-GGE_0842;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0842 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 160 796 . + . ID=id-GGE_0842-2;Dbxref=InterPro:IPR012327,PFAM:PF02086;Note=methyltransfd12~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;locus_tag=GGE_0842 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 163 889 . + . ID=id-GGE_0842-3;Note=superfamily%3B label: MethyltransfD12 superfamily;gbkey=misc_feature;locus_tag=GGE_0842 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 235 439 . + . ID=id-GGE_0842-4;Dbxref=InterPro:IPR023095;Note=Gene3D:1.10.1020.10~adenine-specific methyltransferase%2C domain 2;gbkey=misc_feature;locus_tag=GGE_0842 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 175 601 . - . ID=id-AFQR01000016.1:175..601;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 511 541 . - . ID=id-AFQR01000016.1:511..541;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 897 2651 . - . ID=gene-GGE_0843;Name=GGE_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0843 GCA_000222085.2|AFQR01000016.1 Genbank CDS 897 2651 . - 0 ID=cds-EGT82267.1;Parent=gene-GGE_0843;Dbxref=GeneID:225868181,InterPro:IPR004233,InterPro:IPR004234,InterPro:IPR011335,InterPro:IPR011578,InterPro:IPR011991,InterPro:IPR015334,PFAM:PF02980,PFAM:PF02981,PFAM:PF09254,NCBI_GP:EGT82267.1;Name=EGT82267.1;Note=YP_002744129;Ontology_term=GO:0009307,GO:0003677,GO:0009036,GO:0004536;gbkey=CDS;go_function=DNA binding|0003677||,Type II site-specific deoxyribonuclease activity|0009036||,deoxyribonuclease activity|0004536||;go_process=DNA restriction-modification system|0009307||;locus_tag=GGE_0843;product=type II restriction endonuclease;protein_id=EGT82267.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 903 1773 . - . ID=id-GGE_0843;Note=Gene3D:3.90.241.10;gbkey=misc_feature;locus_tag=GGE_0843 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 906 1344 . - . ID=id-GGE_0843-2;Dbxref=InterPro:IPR004234,PFAM:PF02981;Note=superfamily~foki_n~restriction endonuclease%2C type ii%2C foki%3B label: FokI_N superfamily;gbkey=misc_feature;locus_tag=GGE_0843 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 909 1341 . - . ID=id-GGE_0843-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0843 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1152 1812 . + . ID=id-AFQR01000016.1:1152..1812;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1191 1767 . + . ID=id-AFQR01000016.1:1191..1767;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1296 1356 . + . ID=id-AFQR01000016.1:1296..1356;Dbxref=InterPro:IPR004233,PFAM:PF02980;Note=superfamily~foki_c~restriction endonuclease%2C type ii%2C foki%2C catalytic domain%3B label: FokI_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1314 1350 . + . ID=id-AFQR01000016.1:1314..1350;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1416 2100 . + . ID=id-AFQR01000016.1:1416..2100;Dbxref=InterPro:IPR011578;Note=Gene3D:3.40.91.30~restriction endonuclease%2C foki/endonuclease i%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1455 2073 . + . ID=id-AFQR01000016.1:1455..2073;Dbxref=InterPro:IPR015334,PFAM:PF09254;Note=endonuc-foki_c~restriction endonuclease%2C type ii%2C foki;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1458 2070 . + . ID=id-AFQR01000016.1:1458..2070;Note=superfamily%3B label: Endonuc-FokI_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 1470 2058 . + . ID=id-AFQR01000016.1:1470..2058;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 2662 3831 . - . ID=gene-GGE_0844;Name=GGE_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0844 GCA_000222085.2|AFQR01000016.1 Genbank CDS 2662 3831 . - 0 ID=cds-EGT82268.1;Parent=gene-GGE_0844;Dbxref=GeneID:145641812,NCBI_GP:EGT82268.1;Name=EGT82268.1;Note=ZP_01797387~CGSHiR3021_01042;gbkey=CDS;locus_tag=GGE_0844;product=Hypothetical protein;protein_id=EGT82268.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2701 3547 . + . ID=id-AFQR01000016.1:2701..3547;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2707 2755 . + . ID=id-AFQR01000016.1:2707..2755;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2722 3544 . + . ID=id-AFQR01000016.1:2722..3544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2728 3595 . + . ID=id-AFQR01000016.1:2728..3595;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2731 3748 . + . ID=id-AFQR01000016.1:2731..3748;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 2734 3748 . + . ID=id-AFQR01000016.1:2734..3748;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 4008 4802 . - . ID=gene-GGE_0845;Name=GGE_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0845 GCA_000222085.2|AFQR01000016.1 Genbank CDS 4008 4802 . - 0 ID=cds-EGT82269.1;Parent=gene-GGE_0845;Dbxref=GeneID:145641813,InterPro:IPR007358,PFAM:PF04245,NCBI_GP:EGT82269.1;Name=EGT82269.1;Note=ZP_01797388;Ontology_term=GO:0009295;gbkey=CDS;go_component=nucleoid|0009295||;locus_tag=GGE_0845;product=putative nucleoid-associated protein NdpA;protein_id=EGT82269.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 4008 4800 . - . ID=id-GGE_0845;Note=superfamily%3B label: NA37 superfamily;gbkey=misc_feature;locus_tag=GGE_0845 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 4008 4785 . - . ID=id-GGE_0845-2;Dbxref=InterPro:IPR007358,PFAM:PF04245;Note=na37~nucleoid-associated protein ndpa;gbkey=misc_feature;locus_tag=GGE_0845 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 4044 4584 . + . ID=id-AFQR01000016.1:4044..4584;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 5282 6418 . + . ID=gene-GGE_0846;Name=GGE_0846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0846 GCA_000222085.2|AFQR01000016.1 Genbank CDS 5282 6418 . + 0 ID=cds-EGT82270.1;Parent=gene-GGE_0846;Dbxref=GeneID:260914378,NCBI_GP:EGT82270.1;Name=EGT82270.1;Note=ZP_05920847%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_0846;product=hypothetical protein;protein_id=EGT82270.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 5423 5579 . + . ID=id-GGE_0846;Note=multi-dom%3B label: COG3677;gbkey=misc_feature;locus_tag=GGE_0846 GCA_000222085.2|AFQR01000016.1 Genbank gene 6730 8367 . - . ID=gene-GGE_0847;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank CDS 6730 8367 . - 0 ID=cds-EGT82271.1;Parent=gene-GGE_0847;Dbxref=GeneID:1172792,InterPro:IPR004468,InterPro:IPR017456,InterPro:IPR017926,PFAM:PF00117,PFAM:PF06418,TIGRFAM:TIGR00337,NCBI_GP:EGT82271.1;Name=EGT82271.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||;go_process=pyrimidine nucleotide biosynthetic process|0006221||;locus_tag=GGE_0847;product=CTP synthase;protein_id=EGT82271.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6730 8338 . - . ID=id-GGE_0847;Note=HMMPanther:PTHR11550~family not named;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6730 8335 . - . ID=id-GGE_0847-2;Dbxref=InterPro:IPR004468,TIGRFAM:TIGR00337;Note=pyrg: ctp synthase~ctp synthase;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6736 7540 . - . ID=id-GGE_0847-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6739 8353 . - . ID=id-GGE_0847-4;Note=multi-dom%3B label: pyrG;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6739 8344 . - . ID=id-GGE_0847-5;Dbxref=InterPro:IPR004468;Note=HAMAP:MF_01227~pyrg~ctp synthase;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6739 7570 . - . ID=id-GGE_0847-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6739 7552 . - . ID=id-GGE_0847-7;Dbxref=InterPro:IPR017456,PFAM:PF06418;Note=ctp_synth_n~ctp synthase;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6742 7489 . - . ID=id-GGE_0847-8;Note=specific~superfamily%3B label: CTGs;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6751 6799 . - . ID=id-GGE_0847-9;Note=transmembrane_regions;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 6772 6790 . - . ID=id-GGE_0847-10;Note=seg;gbkey=misc_feature;gene=pyrG;locus_tag=GGE_0847 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 7435 7633 . + . ID=id-AFQR01000016.1:7435..7633;Dbxref=InterPro:IPR017926,PFAM:PF00117;Note=gatase~glutamine amidotransferase type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 7462 7600 . + . ID=id-AFQR01000016.1:7462..7600;Note=specific~superfamily%3B label: GATase1_CTP_Synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 7486 7603 . + . ID=id-AFQR01000016.1:7486..7603;Dbxref=InterPro:IPR017926;Note=ProfileScan:PS51273~gatase_type_1~glutamine amidotransferase type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 7489 7597 . + . ID=id-AFQR01000016.1:7489..7597;Note=Gene3D:3.40.50.880;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 7504 7591 . + . ID=id-AFQR01000016.1:7504..7591;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8433 8442 . + . ID=id-AFQR01000016.1:8433..8442;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 8554 9447 . - . ID=gene-GGE_0848;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank CDS 8554 9447 . - 0 ID=cds-EGT82272.1;Parent=gene-GGE_0848;Dbxref=GeneID:1175025,InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011932,InterPro:IPR013762,InterPro:IPR023009,InterPro:IPR023109,PFAM:PF00589,PFAM:PF02899,TIGRFAM:TIGR02225,NCBI_GP:EGT82272.1;Name=EGT82272.1;Ontology_term=GO:0015074,GO:0006310,GO:0007049,GO:0051301,GO:0007059,GO:0003677;gbkey=CDS;gene=xerD;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||,cell cycle|0007049||,cell division|0051301||,chromosome segregation|0007059||;locus_tag=GGE_0848;product=Tyrosine recombinase xerD;protein_id=EGT82272.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8554 9445 . - . ID=id-GGE_0848;Note=multi-dom%3B label: xerD;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8560 8848 . - . ID=id-GGE_0848-2;Dbxref=InterPro:IPR010998;Note=superfamily:SSF47823~lambda integrase-like domain~integrase%2C lambda-type;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8563 9439 . - . ID=id-GGE_0848-3;Dbxref=InterPro:IPR011932,InterPro:IPR023009;Note=HAMAP:MF_01807~recomb_xerd~tyrosine recombinase xerd~HAMAP:MF_01808~recomb_xerc~tyrosine recombinase xerc/xerd;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8572 8830 . - . ID=id-GGE_0848-4;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8575 9406 . - . ID=id-GGE_0848-5;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8575 8803 . - . ID=id-GGE_0848-6;Dbxref=InterPro:IPR004107,PFAM:PF02899;Note=phage_integr_n~integrase sam-like%2C phage;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8578 9424 . - . ID=id-GGE_0848-7;Dbxref=InterPro:IPR011932,TIGRFAM:TIGR02225;Note=recomb_xerd: tyrosine recombinase xerd~tyrosine recombinase xerd;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8869 9127 . - . ID=id-GGE_0848-8;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8884 9091 . - . ID=id-GGE_0848-9;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8884 9079 . - . ID=id-GGE_0848-10;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;gene=xerD;locus_tag=GGE_0848 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 8587 9244 . + . ID=id-AFQR01000016.1:8587..9244;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9341 9350 . + . ID=id-AFQR01000016.1:9341..9350;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 9478 10644 . - . ID=gene-GGE_0849;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank CDS 9478 10644 . - 0 ID=cds-EGT82273.1;Parent=gene-GGE_0849;Dbxref=GeneID:1175216,InterPro:IPR005276,InterPro:IPR016196,TIGRFAM:TIGR00902,NCBI_GP:EGT82273.1;Name=EGT82273.1;gbkey=CDS;gene=hcaT;locus_tag=GGE_0849;product=Putative 3-phenylpropionic acid transporter;protein_id=EGT82273.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9478 10642 . - . ID=id-GGE_0849;Dbxref=InterPro:IPR005276,TIGRFAM:TIGR00902;Note=2a0127: mfs transporter%2C phenyl propionate p~phenylproprionate permease;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9478 10624 . - . ID=id-GGE_0849-2;Note=superfamily~multi-dom%3B label: 2A0127;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9490 10609 . - . ID=id-GGE_0849-3;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9493 10003 . - . ID=id-GGE_0849-4;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9493 9547 . - . ID=id-GGE_0849-5;Note=transmembrane_regions;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9502 10582 . - . ID=id-GGE_0849-6;Note=HMMPanther:PTHR24003:SF387~subfamily not named~HMMPanther:PTHR24003~family not named;gbkey=misc_feature;gene=hcaT;locus_tag=GGE_0849 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9532 10552 . + . ID=id-AFQR01000016.1:9532..10552;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9532 9958 . + . ID=id-AFQR01000016.1:9532..9958;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9532 9763 . + . ID=id-AFQR01000016.1:9532..9763;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9535 10204 . + . ID=id-AFQR01000016.1:9535..10204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9538 10279 . + . ID=id-AFQR01000016.1:9538..10279;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9541 9685 . + . ID=id-AFQR01000016.1:9541..9685;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 10471 . + . ID=id-AFQR01000016.1:9547..10471;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 10366 . + . ID=id-AFQR01000016.1:9547..10366;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 10108 . + . ID=id-AFQR01000016.1:9547..10108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 9877 . + . ID=id-AFQR01000016.1:9547..9877;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 9685 . + . ID=id-AFQR01000016.1:9547..9685;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 9547 9598 . + . ID=id-AFQR01000016.1:9547..9598;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10000 10084 . + . ID=id-AFQR01000016.1:10000..10084;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10142 10151 . + . ID=id-AFQR01000016.1:10142..10151;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 10644 11459 . - . ID=gene-GGE_0850;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank CDS 10644 11459 . - 0 ID=cds-EGT82274.1;Parent=gene-GGE_0850;Dbxref=GeneID:1172630,InterPro:IPR000304,InterPro:IPR004455,InterPro:IPR008927,InterPro:IPR016040,PFAM:PF03807,PIR:PIRSF000193,TIGRFAM:TIGR00112,NCBI_GP:EGT82274.1;Name=EGT82274.1;Ontology_term=GO:0008152,GO:0055114,GO:0006561,GO:0005488,GO:0003824,GO:0016491,GO:0004735;gbkey=CDS;gene=proC;go_function=binding|0005488||,catalytic activity|0003824||,oxidoreductase activity|0016491||,pyrroline-5-carboxylate reductase activity|0004735||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,proline biosynthetic process|0006561||;locus_tag=GGE_0850;product=Pyrroline-5-carboxylate reductase;protein_id=EGT82274.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10650 11451 . - . ID=id-GGE_0850;Note=multi-dom%3B label: PRK11880;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10650 11118 . - . ID=id-GGE_0850-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10653 11448 . - . ID=id-GGE_0850-3;Dbxref=InterPro:IPR000304,PIR:PIRSF000193;Note=pyrroline-5-carboxylate reductase~pyrroline-5-carboxylate reductase;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10656 11115 . - . ID=id-GGE_0850-4;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10662 11439 . - . ID=id-GGE_0850-5;Dbxref=InterPro:IPR000304;Note=HMMPanther:PTHR11645~family not named~pyrroline-5-carboxylate reductase;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10662 11430 . - . ID=id-GGE_0850-6;Dbxref=InterPro:IPR000304,TIGRFAM:TIGR00112;Note=superfamily~proc: pyrroline-5-carboxylate reductase~pyrroline-5-carboxylate reductase%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10662 10923 . - . ID=id-GGE_0850-7;Dbxref=InterPro:IPR004455,PFAM:PF03807;Note=f420_oxidored~nadp oxidoreductase%2C coenzyme f420-dependent;gbkey=misc_feature;gene=proC;locus_tag=GGE_0850 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10716 11310 . + . ID=id-AFQR01000016.1:10716..11310;Dbxref=InterPro:IPR000304;Note=PatternScan:PS00521~p5cr~pyrroline-5-carboxylate reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 10977 11127 . + . ID=id-AFQR01000016.1:10977..11127;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 11025 11034 . + . ID=id-AFQR01000016.1:11025..11034;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 11525 12433 . + . ID=gene-GGE_0851;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=GGE_0851 GCA_000222085.2|AFQR01000016.1 Genbank CDS 11525 12433 . + 0 ID=cds-EGT82275.1;Parent=gene-GGE_0851;Dbxref=GeneID:1175515,InterPro:IPR007476,PFAM:PF04381,NCBI_GP:EGT82275.1;Name=EGT82275.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||;locus_tag=GGE_0851;product=Recombination-associated protein rdgC;protein_id=EGT82275.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 11525 12431 . + . ID=id-GGE_0851;Note=superfamily%3B label: RdgC superfamily;gbkey=misc_feature;gene=rdgC;locus_tag=GGE_0851 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 11525 12422 . + . ID=id-GGE_0851-2;Dbxref=InterPro:IPR007476,PFAM:PF04381;Note=rdgc~putative exonuclease%2C rdgc;gbkey=misc_feature;gene=rdgC;locus_tag=GGE_0851 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 11573 11786 . - . ID=id-AFQR01000016.1:11573..11786;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 11591 11762 . - . ID=id-AFQR01000016.1:11591..11762;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12450 12459 . - . ID=id-AFQR01000016.1:12450..12459;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 12552 13166 . - . ID=gene-GGE_0852;Name=GGE_0852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank CDS 12552 13166 . - 0 ID=cds-EGT82276.1;Parent=gene-GGE_0852;Dbxref=InterPro:IPR001650,PFAM:PF00271,NCBI_GP:EGT82276.1;Name=EGT82276.1;Note=Hypothetical helicase-like protein;Ontology_term=GO:0005524,GO:0004386,GO:0003676;gbkey=CDS;go_function=ATP binding|0005524||,helicase activity|0004386||,nucleic acid binding|0003676||;locus_tag=GGE_0852;product=putative helicase-like protein;protein_id=EGT82276.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12552 13116 . - . ID=id-GGE_0852;Note=HMMPanther:PTHR24031:SF52~atp-dependent rna helicase srmb~HMMPanther:PTHR24031~family not named;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12552 13002 . - . ID=id-GGE_0852-2;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12552 12972 . - . ID=id-GGE_0852-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12558 12948 . - . ID=id-GGE_0852-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12570 12879 . - . ID=id-GGE_0852-5;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12642 12783 . - . ID=id-GGE_0852-6;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature;locus_tag=GGE_0852 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12624 13029 . + . ID=id-AFQR01000016.1:12624..13029;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 12624 13026 . + . ID=id-AFQR01000016.1:12624..13026;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 13133 13876 . - . ID=gene-GGE_0853;Name=GGE_0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank CDS 13133 13876 . - 0 ID=cds-EGT82277.1;Parent=gene-GGE_0853;Dbxref=InterPro:IPR000629,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,PFAM:PF00270,NCBI_GP:EGT82277.1;Name=EGT82277.1;Note=Hypothetical dEAD-like helicase;Ontology_term=GO:0005524,GO:0008026,GO:0003676;gbkey=CDS;go_function=ATP binding|0005524||,ATP-dependent helicase activity|0008026||,nucleic acid binding|0003676||;locus_tag=GGE_0853;product=putative dEAD-like helicase;protein_id=EGT82277.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13145 13763 . - . ID=id-GGE_0853;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13145 13220 . - . ID=id-GGE_0853-2;Dbxref=InterPro:IPR014014;Note=ProfileScan:PS51195~q_motif~rna helicase%2C dead-box type%2C q motif;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13148 13760 . - . ID=id-GGE_0853-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13151 13781 . - . ID=id-GGE_0853-4;Note=HMMPanther:PTHR24031:SF52~atp-dependent rna helicase srmb~HMMPanther:PTHR24031~family not named;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13151 13748 . - . ID=id-GGE_0853-5;Note=specific~superfamily%3B label: DEADc;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13190 13742 . - . ID=id-GGE_0853-6;Note=multi-dom%3B label: DEXDc;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13217 13628 . - . ID=id-GGE_0853-7;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13238 13658 . - . ID=id-GGE_0853-8;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;locus_tag=GGE_0853 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13160 13598 . + . ID=id-AFQR01000016.1:13160..13598;Dbxref=InterPro:IPR000629;Note=PatternScan:PS00039~dead_atp_helicase~rna helicase%2C atp-dependent%2C dead-box%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 13879 14583 . + . ID=gene-GGE_0854;Name=GGE_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank CDS 13879 14583 . + 0 ID=cds-EGT82278.1;Parent=gene-GGE_0854;Dbxref=InterPro:IPR002052,InterPro:IPR002296,InterPro:IPR007848,InterPro:IPR020596,PFAM:PF05175,NCBI_GP:EGT82278.1;Name=EGT82278.1;Note=CGSHiGG_05325;Ontology_term=GO:0032259,GO:0000154,GO:0008168,GO:0003676,GO:0000179,GO:0008649;gbkey=CDS;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,rRNA (adenine-N6 N6-)-dimethyltransferase activity|0000179||,rRNA methyltransferase activity|0008649||;go_process=methylation|0032259||,rRNA modification|0000154||;locus_tag=GGE_0854;product=tRNA adenine-N6--methyltransferase;protein_id=EGT82278.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13929 13938 . + . ID=id-GGE_0854;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13936 14395 . + . ID=id-GGE_0854-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13969 14488 . + . ID=id-GGE_0854-3;Note=multi-dom%3B label: COG4123;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14005 14326 . + . ID=id-GGE_0854-4;Note=HMMPanther:PTHR18895:SF36~uncharacterized protein yfic~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14026 14320 . + . ID=id-GGE_0854-5;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14062 14254 . + . ID=id-GGE_0854-6;Dbxref=InterPro:IPR007848,PFAM:PF05175;Note=mts~methyltransferase small;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14140 14176 . + . ID=id-GGE_0854-7;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_0854 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13900 14287 . - . ID=id-AFQR01000016.1:13900..14287;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13918 14278 . - . ID=id-AFQR01000016.1:13918..14278;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13921 14077 . - . ID=id-AFQR01000016.1:13921..14077;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13924 14074 . - . ID=id-AFQR01000016.1:13924..14074;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13954 14365 . - . ID=id-AFQR01000016.1:13954..14365;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 13972 14074 . - . ID=id-AFQR01000016.1:13972..14074;Dbxref=InterPro:IPR020596;Note=PatternScan:PS01131~rrna_a_dimeth~ribosomal rna adenine methylase transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14466 14475 . - . ID=id-AFQR01000016.1:14466..14475;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 14687 15742 . - . ID=gene-GGE_0855;Name=GGE_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0855 GCA_000222085.2|AFQR01000016.1 Genbank CDS 14687 15742 . - 0 ID=cds-EGT82279.1;Parent=gene-GGE_0855;Dbxref=GeneID:1175994,InterPro:IPR001537,InterPro:IPR013123,InterPro:IPR016479,PFAM:PF00588,PFAM:PF08032,PIR:PIRSF006280,NCBI_GP:EGT82279.1;Name=EGT82279.1;Note=HI_0424;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:0008168;gbkey=CDS;go_function=RNA binding|0003723||,RNA methyltransferase activity|0008173||,methyltransferase activity|0008168||;go_process=RNA processing|0006396||;locus_tag=GGE_0855;product=putative tRNA/rRNA methyltransferase%2C YfiF%2C predicted;protein_id=EGT82279.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14687 15740 . - . ID=id-GGE_0855;Dbxref=InterPro:IPR016479,PIR:PIRSF006280;Note=predicted trna/rrna methyltransferase%2C yfif type~trna/rrna methyltransferase%2C yfif%2C predicted;gbkey=misc_feature;locus_tag=GGE_0855 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14847 14856 . - . ID=id-GGE_0855-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0855 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15008 15416 . - . ID=id-GGE_0855-3;Note=HMMPanther:PTHR12029:SF25~uncharacterized trna/rrna methyltransferase yfif~HMMPanther:PTHR12029~family not named;gbkey=misc_feature;locus_tag=GGE_0855 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15020 15410 . - . ID=id-GGE_0855-4;Note=multi-dom%3B label: SpoU;gbkey=misc_feature;locus_tag=GGE_0855 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14726 15608 . + . ID=id-AFQR01000016.1:14726..15608;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14906 15047 . + . ID=id-AFQR01000016.1:14906..15047;Dbxref=InterPro:IPR013123,PFAM:PF08032;Note=superfamily~spou_sub_bind~rna 2-o ribose methyltransferase%2C substrate binding%3B label: SpoU_sub_bind superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14924 15020 . + . ID=id-AFQR01000016.1:14924..15020;Note=Gene3D:3.30.1330.30;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 14945 15005 . + . ID=id-AFQR01000016.1:14945..15005;Note=superfamily:SSF55315~l30e-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15095 15317 . + . ID=id-AFQR01000016.1:15095..15317;Note=superfamily%3B label: SpoU_methylase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15098 15314 . + . ID=id-AFQR01000016.1:15098..15314;Dbxref=InterPro:IPR001537,PFAM:PF00588;Note=spou_methylase~trna/rrna methyltransferase%2C spou;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15119 15302 . + . ID=id-AFQR01000016.1:15119..15302;Note=Gene3D:3.40.1280.10;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15191 15233 . + . ID=id-AFQR01000016.1:15191..15233;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 15889 17256 . + . ID=gene-GGE_0856;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank CDS 15889 17256 . + 0 ID=cds-EGT82280.1;Parent=gene-GGE_0856;Dbxref=GeneID:1172694,InterPro:IPR001736,InterPro:IPR016270,PFAM:PF00614,PIR:PIRSF000850,NCBI_GP:EGT82280.1;Name=EGT82280.1;Ontology_term=GO:0008152,GO:0008654,GO:0003824,GO:0016780;gbkey=CDS;gene=pssA;go_function=catalytic activity|0003824||,phosphotransferase activity for other substituted phosphate groups|0016780||;go_process=metabolic process|0008152||,phospholipid biosynthetic process|0008654||;locus_tag=GGE_0856;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=EGT82280.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15889 17254 . + . ID=id-GGE_0856;Dbxref=InterPro:IPR016270,PIR:PIRSF000850;Note=multi-dom~phospholipase d%2C pss type~phospholipase d%2C phosphatidylserine synthase type%3B label: pssA;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15919 17131 . + . ID=id-GGE_0856-2;Note=HMMPanther:PTHR12586~family not named;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15955 16483 . + . ID=id-GGE_0856-3;Note=superfamily:SSF56024~phospholipase d/nuclease;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15976 16378 . + . ID=id-GGE_0856-4;Note=Gene3D:3.30.870.10;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 16006 16267 . + . ID=id-GGE_0856-5;Note=specific~superfamily%3B label: PLDc;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 16582 16591 . + . ID=id-GGE_0856-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=pssA;locus_tag=GGE_0856 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15970 16960 . - . ID=id-AFQR01000016.1:15970..16960;Dbxref=InterPro:IPR001736,PFAM:PF00614;Note=pldc~phospholipase d/transphosphatidylase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15973 16957 . - . ID=id-AFQR01000016.1:15973..16957;Dbxref=InterPro:IPR001736;Note=ProfileScan:PS50035~pld~phospholipase d/transphosphatidylase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 15976 17083 . - . ID=id-AFQR01000016.1:15976..17083;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 16324 16648 . - . ID=id-AFQR01000016.1:16324..16648;Note=superfamily:SSF56024~phospholipase d/nuclease;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 16384 16645 . - . ID=id-AFQR01000016.1:16384..16645;Note=Gene3D:3.30.870.10;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 16435 16615 . - . ID=id-AFQR01000016.1:16435..16615;Note=specific~superfamily%3B label: PLDc;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 17427 18104 . - . ID=gene-GGE_0857;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=GGE_0857 GCA_000222085.2|AFQR01000016.1 Genbank CDS 17427 18104 . - 0 ID=cds-EGT82281.1;Parent=gene-GGE_0857;Dbxref=GeneID:205371814,InterPro:IPR006419,PFAM:PF04973,TIGRFAM:TIGR01528,NCBI_GP:EGT82281.1;Name=EGT82281.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||;go_process=transport|0006810||;locus_tag=GGE_0857;product=Nicotinamide riboside transporter pnuC;protein_id=EGT82281.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17466 17496 . - . ID=id-GGE_0857;Note=transmembrane_regions;gbkey=misc_feature;gene=pnuC;locus_tag=GGE_0857 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17472 18060 . - . ID=id-GGE_0857-2;Note=superfamily%3B label: NMN_transporter superfamily;gbkey=misc_feature;gene=pnuC;locus_tag=GGE_0857 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17544 17985 . - . ID=id-GGE_0857-3;Dbxref=InterPro:IPR006419,TIGRFAM:TIGR01528;Note=nmn_trans_pnuc: nicotinamide mononucle~nicotinamide mononucleotide transporter pnuc;gbkey=misc_feature;gene=pnuC;locus_tag=GGE_0857 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17547 17970 . - . ID=id-GGE_0857-4;Dbxref=InterPro:IPR006419,PFAM:PF04973;Note=nmn_transporter~nicotinamide mononucleotide transporter pnuc;gbkey=misc_feature;gene=pnuC;locus_tag=GGE_0857 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17463 17880 . + . ID=id-AFQR01000016.1:17463..17880;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17469 17820 . + . ID=id-AFQR01000016.1:17469..17820;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17481 17547 . + . ID=id-AFQR01000016.1:17481..17547;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17487 17892 . + . ID=id-AFQR01000016.1:17487..17892;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17487 17700 . + . ID=id-AFQR01000016.1:17487..17700;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17487 17613 . + . ID=id-AFQR01000016.1:17487..17613;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17496 17970 . + . ID=id-AFQR01000016.1:17496..17970;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 17496 17796 . + . ID=id-AFQR01000016.1:17496..17796;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18261 18270 . - . ID=id-AFQR01000016.1:18261..18270;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 18270 19037 . - . ID=gene-GGE_0858;Name=GGE_0858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank CDS 18270 19037 . - 0 ID=cds-EGT82282.1;Parent=gene-GGE_0858;Dbxref=GeneID:1169971,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT82282.1;Name=EGT82282.1;Note=HI_1078;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0858;product=Putative amino-acid ABC transporter ATP-binding protein;protein_id=EGT82282.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18270 18996 . - . ID=id-GGE_0858;Note=multi-dom~HMMPanther:PTHR24220:SF33~subfamily not named~HMMPanther:PTHR24220~family not named%3B label: GlnQ;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18270 18993 . - . ID=id-GGE_0858-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18276 18993 . - . ID=id-GGE_0858-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18276 18927 . - . ID=id-GGE_0858-4;Note=specific~superfamily%3B label: ABC_HisP_GlnQ_permeases;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18282 18933 . - . ID=id-GGE_0858-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18393 18663 . - . ID=id-GGE_0858-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0858 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 18315 18699 . + . ID=id-AFQR01000016.1:18315..18699;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 19047 19763 . - . ID=gene-GGE_0859;Name=GGE_0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank CDS 19047 19763 . - 0 ID=cds-EGT82283.1;Parent=gene-GGE_0859;Dbxref=InterPro:IPR000515,InterPro:IPR010065,PFAM:PF00528,TIGRFAM:TIGR01726,NCBI_GP:EGT82283.1;Name=EGT82283.1;Note=HI_1079~HI_0179;Ontology_term=GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0859;product=Putative amino-acid ABC transporter permease protein;protein_id=EGT82283.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19125 19683 . - . ID=id-GGE_0859;Note=multi-dom%3B label: ArtQ;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19125 19359 . - . ID=id-GGE_0859-2;Dbxref=InterPro:IPR010065,TIGRFAM:TIGR01726;Note=heqro_perm_3tm: amino abc transporter%2C~amino acid abc transporter%2C permease protein%2C 3-tm domain%2C his/glu/gln/arg/opine family;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19143 19662 . - . ID=id-GGE_0859-3;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19149 19629 . - . ID=id-GGE_0859-4;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19149 19623 . - . ID=id-GGE_0859-5;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19194 19608 . - . ID=id-GGE_0859-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0859 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19107 19371 . + . ID=id-AFQR01000016.1:19107..19371;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19107 19284 . + . ID=id-AFQR01000016.1:19107..19284;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19116 19662 . + . ID=id-AFQR01000016.1:19116..19662;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19116 19155 . + . ID=id-AFQR01000016.1:19116..19155;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 19747 20520 . - . ID=gene-GGE_0860;Name=GGE_0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank CDS 19747 20520 . - 0 ID=cds-EGT82284.1;Parent=gene-GGE_0860;Dbxref=GeneID:319897440,InterPro:IPR001638,InterPro:IPR018313,PFAM:PF00497,NCBI_GP:EGT82284.1;Name=EGT82284.1;Note=YP_004135637;Ontology_term=GO:0006810,GO:0030288,GO:0005215;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0860;product=bacterial extracellular solute-binding protein;protein_id=EGT82284.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19747 20515 . - . ID=id-GGE_0860;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19774 20494 . - . ID=id-GGE_0860-2;Note=multi-dom%3B label: PRK11260;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19852 20410 . - . ID=id-GGE_0860-3;Note=HMMPanther:PTHR18966:SF91~subfamily not named~HMMPanther:PTHR18966~family not named;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19855 20395 . - . ID=id-GGE_0860-4;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19858 20398 . - . ID=id-GGE_0860-5;Dbxref=InterPro:IPR001638,PFAM:PF00497;Note=sbp_bac_3~extracellular solute-binding protein%2C family 3;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20059 20071 . - . ID=id-GGE_0860-6;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_0860 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19789 19921 . + . ID=id-AFQR01000016.1:19789..19921;Dbxref=InterPro:IPR018313;Note=PatternScan:PS01039~sbp_bacterial_3~extracellular solute-binding protein%2C family 3%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19813 20407 . + . ID=id-AFQR01000016.1:19813..20407;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19813 20245 . + . ID=id-AFQR01000016.1:19813..20245;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 19873 20395 . + . ID=id-AFQR01000016.1:19873..20395;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20663 20672 . - . ID=id-AFQR01000016.1:20663..20672;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 20821 22095 . - . ID=gene-GGE_0861;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank CDS 20821 22095 . - 0 ID=cds-EGT82285.1;Parent=gene-GGE_0861;Dbxref=GeneID:166222776,InterPro:IPR001986,InterPro:IPR005750,InterPro:IPR013792,PFAM:PF00275,TIGRFAM:TIGR01072,NCBI_GP:EGT82285.1;Name=EGT82285.1;Ontology_term=GO:0019277,GO:0003824,GO:0016765,GO:0016740;gbkey=CDS;gene=murA;go_function=catalytic activity|0003824||,transferase activity transferring alkyl or aryl (other than methyl) groups|0016765||,transferase activity|0016740||;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||;locus_tag=GGE_0861;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=EGT82285.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20821 22084 . - . ID=id-GGE_0861;Dbxref=InterPro:IPR013792;Note=superfamily:SSF55205~ept/rtpc-like~rna 3'-terminal phosphate cyclase/enolpyruvate transferase%2C alpha/beta;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20821 22075 . - . ID=id-GGE_0861-2;Dbxref=InterPro:IPR005750;Note=HMMPanther:PTHR21090:SF4~udp-n-acetylglucosamine enolpyruvyl transferase~udp-n-acetylglucosamine 1-carboxyvinyltransferase~HMMPanther:PTHR21090~family not named~HAMAP:MF_00111~mura~udp-n-acetylglucosamine 1-carboxyvinyltransferase;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20821 22072 . - . ID=id-GGE_0861-3;Dbxref=InterPro:IPR005750,TIGRFAM:TIGR01072;Note=multi-dom~mura: udp-n-acetylglucosamine 1-carboxyvinyl~udp-n-acetylglucosamine 1-carboxyvinyltransferase%3B label: PRK09369;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20842 22027 . - . ID=id-GGE_0861-4;Dbxref=InterPro:IPR001986,PFAM:PF00275;Note=epsp_synthase~enolpyruvate transferase domain;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20857 22021 . - . ID=id-GGE_0861-5;Note=specific~superfamily%3B label: EPT_RTPC-like superfamily;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20884 21424 . - . ID=id-GGE_0861-6;Dbxref=InterPro:IPR001986;Note=Gene3D:3.65.10.10~enolpyruvate transferase domain;gbkey=misc_feature;gene=murA;locus_tag=GGE_0861 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 20857 20893 . + . ID=id-AFQR01000016.1:20857..20893;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 21409 21487 . + . ID=id-AFQR01000016.1:21409..21487;Dbxref=InterPro:IPR001986;Note=Gene3D:3.65.10.10~enolpyruvate transferase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 22106 22363 . - . ID=gene-GGE_0862;Name=GGE_0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0862 GCA_000222085.2|AFQR01000016.1 Genbank CDS 22106 22363 . - 0 ID=cds-EGT82286.1;Parent=gene-GGE_0862;Dbxref=InterPro:IPR002634,PFAM:PF01722,PIR:PIRSF003113,NCBI_GP:EGT82286.1;Name=EGT82286.1;Note=HI_1082;gbkey=CDS;locus_tag=GGE_0862;product=putative bolA protein;protein_id=EGT82286.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22106 22352 . - . ID=id-GGE_0862;Dbxref=InterPro:IPR002634;Note=HMMPanther:PTHR12735:SF7~uncharacterized protein yrba~HMMPanther:PTHR12735~family not named~bola protein;gbkey=misc_feature;locus_tag=GGE_0862 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22106 22346 . - . ID=id-GGE_0862-2;Dbxref=InterPro:IPR002634;Note=superfamily~superfamily:SSF82657~bola-like~bola protein~Gene3D:3.30.300.90~bola protein%3B label: BolA superfamily;gbkey=misc_feature;locus_tag=GGE_0862 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22106 22343 . - . ID=id-GGE_0862-3;Dbxref=InterPro:IPR002634,PIR:PIRSF003113;Note=stress-induced morphoprotein%2C bola type~bola protein;gbkey=misc_feature;locus_tag=GGE_0862 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22151 22289 . - . ID=id-GGE_0862-4;Dbxref=InterPro:IPR002634,PFAM:PF01722;Note=bola~bola protein;gbkey=misc_feature;locus_tag=GGE_0862 GCA_000222085.2|AFQR01000016.1 Genbank gene 22375 22692 . - . ID=gene-GGE_0863;Name=GGE_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank CDS 22375 22692 . - 0 ID=cds-EGT82287.1;Parent=gene-GGE_0863;Dbxref=InterPro:IPR002645,PFAM:PF01740,NCBI_GP:EGT82287.1;Name=EGT82287.1;Note=HI_1083;gbkey=CDS;locus_tag=GGE_0863;product=putative sulphate transporter/antisigma-factor antagonist STAS;protein_id=EGT82287.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22375 22690 . - . ID=id-GGE_0863;Dbxref=InterPro:IPR002645;Note=ProfileScan:PS50801~stas~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22384 22684 . - . ID=id-GGE_0863-2;Dbxref=InterPro:IPR002645;Note=superfamily:SSF52091~anti-sigma factor antagonist spoiiaa~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22387 22675 . - . ID=id-GGE_0863-3;Dbxref=InterPro:IPR002645;Note=Gene3D:3.30.750.24~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22417 22630 . - . ID=id-GGE_0863-4;Note=specific~superfamily%3B label: STAS superfamily;gbkey=misc_feature;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22504 22543 . - . ID=id-GGE_0863-5;Dbxref=InterPro:IPR002645,PFAM:PF01740;Note=stas~sulphate transporter/antisigma-factor antagonist stas;gbkey=misc_feature;locus_tag=GGE_0863 GCA_000222085.2|AFQR01000016.1 Genbank gene 22711 23358 . - . ID=gene-GGE_0864;Name=GGE_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0864 GCA_000222085.2|AFQR01000016.1 Genbank CDS 22711 23358 . - 0 ID=cds-EGT82288.1;Parent=gene-GGE_0864;Dbxref=GeneID:301155766,InterPro:IPR008869,InterPro:IPR023094,PFAM:PF05494,NCBI_GP:EGT82288.1;Name=EGT82288.1;Note=CBW15234;gbkey=CDS;locus_tag=GGE_0864;product=Putative ABC-type organic solvent transporter;protein_id=EGT82288.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22732 22780 . - . ID=id-GGE_0864;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0864 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22735 23335 . - . ID=id-GGE_0864-2;Note=superfamily%3B label: Ttg2D superfamily;gbkey=misc_feature;locus_tag=GGE_0864 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22822 23218 . - . ID=id-GGE_0864-3;Dbxref=InterPro:IPR008869,PFAM:PF05494;Note=multi-dom~tol_tol_ttg2~toluene tolerance ttg2%3B label: Tol_Tol_Ttg2;gbkey=misc_feature;locus_tag=GGE_0864 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22813 23245 . + . ID=id-AFQR01000016.1:22813..23245;Dbxref=InterPro:IPR023094;Note=Gene3D:1.10.10.640~toluene tolerance protein%2C alpha-helical;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 22888 23068 . + . ID=id-AFQR01000016.1:22888..23068;Note=Gene3D:3.10.450.50;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23294 23303 . + . ID=id-AFQR01000016.1:23294..23303;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 23384 23890 . - . ID=gene-GGE_0865;Name=GGE_0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0865 GCA_000222085.2|AFQR01000016.1 Genbank CDS 23384 23890 . - 0 ID=cds-EGT82289.1;Parent=gene-GGE_0865;Dbxref=GeneID:1176836,InterPro:IPR003399,PFAM:PF02470,NCBI_GP:EGT82289.1;Name=EGT82289.1;Note=HI_1085;gbkey=CDS;locus_tag=GGE_0865;product=Putative ABC transporter-binding protein;protein_id=EGT82289.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23405 23453 . - . ID=id-GGE_0865;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0865 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23501 23624 . - . ID=id-GGE_0865-2;Note=superfamily%3B label: MCE superfamily;gbkey=misc_feature;locus_tag=GGE_0865 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23504 23621 . - . ID=id-GGE_0865-3;Dbxref=InterPro:IPR003399,PFAM:PF02470;Note=mce~mammalian cell entry-related;gbkey=misc_feature;locus_tag=GGE_0865 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23420 23567 . + . ID=id-AFQR01000016.1:23420..23567;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 23900 24685 . - . ID=gene-GGE_0866;Name=GGE_0866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0866 GCA_000222085.2|AFQR01000016.1 Genbank CDS 23900 24685 . - 0 ID=cds-EGT82290.1;Parent=gene-GGE_0866;Dbxref=GeneID:1176838,InterPro:IPR003453,PFAM:PF02405,TIGRFAM:TIGR00056,NCBI_GP:EGT82290.1;Name=EGT82290.1;Note=HI_1086;gbkey=CDS;locus_tag=GGE_0866;product=Putative ABC transporter permease protein;protein_id=EGT82290.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23900 24680 . - . ID=id-GGE_0866;Dbxref=InterPro:IPR003453,TIGRFAM:TIGR00056;Note=tigr00056: conserved hypothetical protein~domain of unknown function duf140;gbkey=misc_feature;locus_tag=GGE_0866 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23915 24668 . - . ID=id-GGE_0866-2;Note=superfamily%3B label: DUF140 superfamily;gbkey=misc_feature;locus_tag=GGE_0866 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24032 24542 . - . ID=id-GGE_0866-3;Dbxref=InterPro:IPR003453,PFAM:PF02405;Note=duf140~domain of unknown function duf140;gbkey=misc_feature;locus_tag=GGE_0866 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23945 24050 . + . ID=id-AFQR01000016.1:23945..24050;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23954 23960 . + . ID=id-AFQR01000016.1:23954..23960;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23969 24614 . + . ID=id-AFQR01000016.1:23969..24614;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23969 24497 . + . ID=id-AFQR01000016.1:23969..24497;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23969 24344 . + . ID=id-AFQR01000016.1:23969..24344;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 23969 24071 . + . ID=id-AFQR01000016.1:23969..24071;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24366 24375 . + . ID=id-AFQR01000016.1:24366..24375;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 24682 25476 . - . ID=gene-GGE_0867;Name=GGE_0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank CDS 24682 25476 . - 0 ID=cds-EGT82291.1;Parent=gene-GGE_0867;Dbxref=GeneID:1176840,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT82291.1;Name=EGT82291.1;Note=HI_1087;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0867;product=putative aBC transporter-like protein-like protein;protein_id=EGT82291.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24688 25411 . - . ID=id-GGE_0867;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24694 25459 . - . ID=id-GGE_0867-2;Note=multi-dom%3B label: PRK11831;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24694 25447 . - . ID=id-GGE_0867-3;Note=HMMPanther:PTHR24220:SF52~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24697 25396 . - . ID=id-GGE_0867-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24700 25393 . - . ID=id-GGE_0867-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24700 25387 . - . ID=id-GGE_0867-6;Note=specific~superfamily%3B label: ABC_Org_Solvent_Resistant;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24817 25057 . - . ID=id-GGE_0867-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0867 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24718 25123 . + . ID=id-AFQR01000016.1:24718..25123;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 24727 25108 . + . ID=id-AFQR01000016.1:24727..25108;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25497 25506 . + . ID=id-AFQR01000016.1:25497..25506;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 25516 27054 . - . ID=gene-GGE_0868;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank CDS 25516 27054 . - 0 ID=cds-EGT82292.1;Parent=gene-GGE_0868;Dbxref=GeneID:1170804,InterPro:IPR003010,InterPro:IPR004563,PFAM:PF00795,TIGRFAM:TIGR00546,NCBI_GP:EGT82292.1;Name=EGT82292.1;Ontology_term=GO:0042158,GO:0006807,GO:0016021,GO:0016410,GO:0016810;gbkey=CDS;gene=lnt;go_component=integral to membrane|0016021||;go_function=N-acyltransferase activity|0016410||,hydrolase activity acting on carbon-nitrogen (but not peptide) bonds|0016810||;go_process=lipoprotein biosynthetic process|0042158||,nitrogen compound metabolic process|0006807||;locus_tag=GGE_0868;product=Apolipoprotein N-acyltransferase;protein_id=EGT82292.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25525 26977 . - . ID=id-GGE_0868;Dbxref=InterPro:IPR004563;Note=HAMAP:MF_01148~lnt~apolipoprotein n-acyltransferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25528 27022 . - . ID=id-GGE_0868-2;Note=multi-dom%3B label: lnt;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25561 25585 . - . ID=id-GGE_0868-3;Note=transmembrane_regions;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25684 26707 . - . ID=id-GGE_0868-4;Dbxref=InterPro:IPR004563,TIGRFAM:TIGR00546;Note=lnt: apolipoprotein n-acyltransferase~apolipoprotein n-acyltransferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26143 26356 . - . ID=id-GGE_0868-5;Dbxref=InterPro:IPR003010;Note=superfamily:SSF56317~carbon-nitrogen hydrolase~nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26158 26308 . - . ID=id-GGE_0868-6;Dbxref=InterPro:IPR003010;Note=Gene3D:3.60.110.10~nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26170 26395 . - . ID=id-GGE_0868-7;Dbxref=InterPro:IPR003010;Note=ProfileScan:PS50263~cn_hydrolase~nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26170 26338 . - . ID=id-GGE_0868-8;Note=specific~superfamily%3B label: ALP_N-acyl_transferase;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26713 26722 . - . ID=id-GGE_0868-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=lnt;locus_tag=GGE_0868 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25543 25783 . + . ID=id-AFQR01000016.1:25543..25783;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25570 26074 . + . ID=id-AFQR01000016.1:25570..26074;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25573 26062 . + . ID=id-AFQR01000016.1:25573..26062;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25576 26965 . + . ID=id-AFQR01000016.1:25576..26965;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25576 25852 . + . ID=id-AFQR01000016.1:25576..25852;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25576 25663 . + . ID=id-AFQR01000016.1:25576..25663;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25585 25969 . + . ID=id-AFQR01000016.1:25585..25969;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 25585 25765 . + . ID=id-AFQR01000016.1:25585..25765;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26062 26485 . + . ID=id-AFQR01000016.1:26062..26485;Note=HMMPanther:PTHR11750~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26077 26176 . + . ID=id-AFQR01000016.1:26077..26176;Dbxref=InterPro:IPR003010,PFAM:PF00795;Note=cn_hydrolase~nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 26903 26912 . + . ID=id-AFQR01000016.1:26903..26912;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 27178 28077 . - . ID=gene-GGE_0869;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank CDS 27178 28077 . - 0 ID=cds-EGT82293.1;Parent=gene-GGE_0869;Dbxref=GeneID:3025018,InterPro:IPR000644,InterPro:IPR005170,InterPro:IPR016169,PFAM:PF00571,PFAM:PF03471,NCBI_GP:EGT82293.1;Name=EGT82293.1;Ontology_term=GO:0055114,GO:0003824,GO:0050660,GO:0005515;gbkey=CDS;gene=corC;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,protein binding|0005515||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0869;product=Magnesium and cobalt efflux protein CorC;protein_id=EGT82293.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27178 28039 . - . ID=id-GGE_0869;Note=multi-dom%3B label: CorC;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27190 27208 . - . ID=id-GGE_0869-2;Note=seg;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27277 27979 . - . ID=id-GGE_0869-3;Note=HMMPanther:PTHR22777~family not named;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27343 27613 . - . ID=id-GGE_0869-4;Note=Gene3D:3.10.580.10;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27370 27373 . - . ID=id-GGE_0869-5;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27409 27517 . - . ID=id-GGE_0869-6;Note=specific~superfamily%3B label: CBS_pair superfamily;gbkey=misc_feature;gene=corC;locus_tag=GGE_0869 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27328 27598 . + . ID=id-AFQR01000016.1:27328..27598;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27352 27598 . + . ID=id-AFQR01000016.1:27352..27598;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27361 27385 . + . ID=id-AFQR01000016.1:27361..27385;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27364 27397 . + . ID=id-AFQR01000016.1:27364..27397;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27376 27604 . + . ID=id-AFQR01000016.1:27376..27604;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27409 27802 . + . ID=id-AFQR01000016.1:27409..27802;Dbxref=InterPro:IPR005170,PFAM:PF03471;Note=corc_hlyc~transporter-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27412 27799 . + . ID=id-AFQR01000016.1:27412..27799;Note=superfamily%3B label: CorC_HlyC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 27439 27778 . + . ID=id-AFQR01000016.1:27439..27778;Dbxref=InterPro:IPR016169;Note=Gene3D:3.30.465.10~co dehydrogenase flavolike protein%2C fad-binding%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28161 28170 . + . ID=id-AFQR01000016.1:28161..28170;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 28206 29228 . - . ID=gene-GGE_0870;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank CDS 28206 29228 . - 0 ID=cds-EGT82294.1;Parent=gene-GGE_0870;Dbxref=GeneID:1169831,InterPro:IPR008183,InterPro:IPR011013,InterPro:IPR013458,InterPro:IPR014718,InterPro:IPR015443,InterPro:IPR018052,PFAM:PF01263,TIGRFAM:TIGR02636,NCBI_GP:EGT82294.1;Name=EGT82294.1;Ontology_term=GO:0005975,GO:0006012,GO:0019318,GO:0004034,GO:0030246,GO:0003824,GO:0016853;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||,carbohydrate binding|0030246||,catalytic activity|0003824||,isomerase activity|0016853||;go_process=carbohydrate metabolic process|0005975||,galactose metabolic process|0006012||,hexose metabolic process|0019318||;locus_tag=GGE_0870;product=Aldose 1-epimerase;protein_id=EGT82294.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28206 29226 . - . ID=id-GGE_0870;Dbxref=InterPro:IPR011013;Note=superfamily:SSF74650~galactose mutarotase-like~glycoside hydrolase-type carbohydrate-binding;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28227 29205 . - . ID=id-GGE_0870-2;Dbxref=InterPro:IPR014718;Note=multi-dom~Gene3D:2.70.98.10~glycoside hydrolase-type carbohydrate-binding%2C subgroup%3B label: GalM;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28236 29133 . - . ID=id-GGE_0870-3;Dbxref=InterPro:IPR015443;Note=HMMPanther:PTHR10091~aldose-1-epimerase~aldose 1-epimerase%2C subgroup;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28242 29193 . - . ID=id-GGE_0870-4;Dbxref=InterPro:IPR013458,TIGRFAM:TIGR02636;Note=galm_leloir: galactose mutarotase~aldose 1-epimerase%2C bacterial;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28257 29175 . - . ID=id-GGE_0870-5;Note=specific~superfamily%3B label: Aldose_epim superfamily;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28257 29172 . - . ID=id-GGE_0870-6;Dbxref=InterPro:IPR008183,PFAM:PF01263;Note=aldose_epim~aldose 1-epimerase;gbkey=misc_feature;gene=galM;locus_tag=GGE_0870 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 28236 28710 . + . ID=id-AFQR01000016.1:28236..28710;Dbxref=InterPro:IPR018052;Note=PatternScan:PS00545~aldose_1_epimerase~aldose 1-epimerase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 29238 30392 . - . ID=gene-GGE_0871;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank CDS 29238 30392 . - 0 ID=cds-EGT82295.1;Parent=gene-GGE_0871;Dbxref=GeneID:1169820,InterPro:IPR000705,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR006206,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR019539,InterPro:IPR019741,InterPro:IPR020568,InterPro:IPR022963,PFAM:PF00288,PFAM:PF08544,PFAM:PF10509,PIR:PIRSF000530,TIGRFAM:TIGR00131,NCBI_GP:EGT82295.1;Name=EGT82295.1;Ontology_term=GO:0046835,GO:0006012,GO:0008152,GO:0016310,GO:0005737,GO:0005524,GO:0004335,GO:0016301,GO:0016773;gbkey=CDS;gene=galK;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,galactokinase activity|0004335||,kinase activity|0016301||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=carbohydrate phosphorylation|0046835||,galactose metabolic process|0006012||,metabolic process|0008152||,phosphorylation|0016310||;locus_tag=GGE_0871;product=Galactokinase;protein_id=EGT82295.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29238 30390 . - . ID=id-GGE_0871;Note=multi-dom%3B label: PRK05101;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29238 30387 . - . ID=id-GGE_0871-2;Dbxref=InterPro:IPR000705,PIR:PIRSF000530;Note=galactokinase~galactokinase;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29238 29847 . - . ID=id-GGE_0871-3;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29250 30381 . - . ID=id-GGE_0871-4;Dbxref=InterPro:IPR000705,TIGRFAM:TIGR00131;Note=HMMPanther:PTHR10457:SF6~galactokinase~HMMPanther:PTHR10457~mevalonate kinase/galactokinase~gal_kin: galactokinase~galactokinase;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29265 29391 . - . ID=id-GGE_0871-5;Dbxref=InterPro:IPR019539,PFAM:PF10509;Note=galkase_gal_bdg~galactokinase galactose-binding domain;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29271 29385 . - . ID=id-GGE_0871-6;Note=superfamily%3B label: GalKase_gal_bdg superfamily;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29301 29772 . - . ID=id-GGE_0871-7;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29313 30318 . - . ID=id-GGE_0871-8;Dbxref=InterPro:IPR022963;Note=HAMAP:MF_00246~galactokinase~galactokinase%2C bacterial;gbkey=misc_feature;gene=galK;locus_tag=GGE_0871 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29274 30225 . + . ID=id-AFQR01000016.1:29274..30225;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29274 29598 . + . ID=id-AFQR01000016.1:29274..29598;Dbxref=InterPro:IPR006203;Note=PatternScan:PS00627~ghmp_kinases_atp~ghmp kinase%2C atp-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29274 29508 . + . ID=id-AFQR01000016.1:29274..29508;Dbxref=InterPro:IPR000705;Note=FPrintScan:PR00473~galctokinase~galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29274 29319 . + . ID=id-AFQR01000016.1:29274..29319;Dbxref=InterPro:IPR019741;Note=PatternScan:PS00106~galactokinase~galactokinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29283 30033 . + . ID=id-AFQR01000016.1:29283..30033;Dbxref=InterPro:IPR000705;Note=FPrintScan:PR00473~galctokinase~galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29292 30228 . + . ID=id-AFQR01000016.1:29292..30228;Dbxref=InterPro:IPR006206;Note=FPrintScan:PR00959~mevgalkinase~mevalonate/galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29295 29571 . + . ID=id-AFQR01000016.1:29295..29571;Dbxref=InterPro:IPR000705;Note=FPrintScan:PR00473~galctokinase~galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29295 29319 . + . ID=id-AFQR01000016.1:29295..29319;Dbxref=InterPro:IPR000705;Note=FPrintScan:PR00473~galctokinase~galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29298 29721 . + . ID=id-AFQR01000016.1:29298..29721;Dbxref=InterPro:IPR006206;Note=FPrintScan:PR00959~mevgalkinase~mevalonate/galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29301 29589 . + . ID=id-AFQR01000016.1:29301..29589;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29307 29592 . + . ID=id-AFQR01000016.1:29307..29592;Dbxref=InterPro:IPR006206;Note=FPrintScan:PR00959~mevgalkinase~mevalonate/galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29313 29313 . + . ID=id-AFQR01000016.1:29313..29313;Dbxref=InterPro:IPR006206;Note=FPrintScan:PR00959~mevgalkinase~mevalonate/galactokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29439 29580 . + . ID=id-AFQR01000016.1:29439..29580;Dbxref=InterPro:IPR006204,PFAM:PF00288;Note=ghmp_kinases_n~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29490 30078 . + . ID=id-AFQR01000016.1:29490..30078;Dbxref=InterPro:IPR013750,PFAM:PF08544;Note=ghmp_kinases_c~ghmp kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29493 30078 . + . ID=id-AFQR01000016.1:29493..30078;Note=superfamily%3B label: GHMP_kinases_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29614 29623 . + . ID=id-AFQR01000016.1:29614..29623;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29784 29847 . + . ID=id-AFQR01000016.1:29784..29847;Note=superfamily:SSF55060~ghmp kinase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 29784 29841 . + . ID=id-AFQR01000016.1:29784..29841;Note=Gene3D:3.30.70.890;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 30461 31510 . - . ID=gene-GGE_0872;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank CDS 30461 31510 . - 0 ID=cds-EGT82296.1;Parent=gene-GGE_0872;Dbxref=GeneID:1169825,InterPro:IPR001937,InterPro:IPR005849,InterPro:IPR005850,InterPro:IPR011146,InterPro:IPR011151,InterPro:IPR019779,PFAM:PF01087,PFAM:PF02744,PIR:PIRSF000808,TIGRFAM:TIGR00209,NCBI_GP:EGT82296.1;Name=EGT82296.1;Ontology_term=GO:0006012,GO:0008108,GO:0003824,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||,catalytic activity|0003824||,zinc ion binding|0008270||;go_process=galactose metabolic process|0006012||;locus_tag=GGE_0872;product=Galactose-1-phosphate uridylyltransferase;protein_id=EGT82296.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30461 31508 . - . ID=id-GGE_0872;Dbxref=InterPro:IPR001937,TIGRFAM:TIGR00209;Note=galt_1: galactose-1-phosphate uridylyltransf~galactose-1-phosphate uridyl transferase%2C class i;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30461 31505 . - . ID=id-GGE_0872-2;Dbxref=InterPro:IPR001937;Note=HMMPanther:PTHR11943~family not named~galactose-1-phosphate uridyl transferase%2C class i;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30461 31499 . - . ID=id-GGE_0872-3;Dbxref=InterPro:IPR001937,PIR:PIRSF000808;Note=galactose-1-phosphate uridylyltransferase~galactose-1-phosphate uridyl transferase%2C class i;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30467 31499 . - . ID=id-GGE_0872-4;Note=multi-dom%3B label: PRK11720;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30470 30989 . - . ID=id-GGE_0872-5;Dbxref=InterPro:IPR011146;Note=superfamily:SSF54197~hit-like~histidine triad-like motif;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30476 30980 . - . ID=id-GGE_0872-6;Dbxref=InterPro:IPR005849,PFAM:PF01087;Note=galp_udp_transf~galactose-1-phosphate uridyl transferase;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30497 31445 . - . ID=id-GGE_0872-7;Note=specific~superfamily%3B label: GalT;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30599 30854 . - . ID=id-GGE_0872-8;Dbxref=InterPro:IPR011151;Note=Gene3D:3.30.428.10~histidine triad motif;gbkey=misc_feature;gene=galT;locus_tag=GGE_0872 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30515 30917 . + . ID=id-AFQR01000016.1:30515..30917;Dbxref=InterPro:IPR019779;Note=PatternScan:PS00117~gal_p_udp_transf_i~galactose-1-phosphate uridyl transferase%2C class i his-active site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30953 31013 . + . ID=id-AFQR01000016.1:30953..31013;Dbxref=InterPro:IPR005850,PFAM:PF02744;Note=galp_udp_tr_c~galactose-1-phosphate uridyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30974 30998 . + . ID=id-AFQR01000016.1:30974..30998;Dbxref=InterPro:IPR011146;Note=superfamily:SSF54197~hit-like~histidine triad-like motif;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 30974 30992 . + . ID=id-AFQR01000016.1:30974..30992;Dbxref=InterPro:IPR011151;Note=Gene3D:3.30.428.10~histidine triad motif;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 31721 32719 . + . ID=gene-GGE_0873;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank CDS 31721 32719 . + 0 ID=cds-EGT82297.1;Parent=gene-GGE_0873;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,PFAM:PF00356,PFAM:PF00532,NCBI_GP:EGT82297.1;Name=EGT82297.1;Ontology_term=GO:0006355,GO:0005622,GO:0003677,GO:0003700;gbkey=CDS;gene=galR;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0873;product=HTH-type transcriptional regulator galR;protein_id=EGT82297.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31721 32708 . + . ID=id-GGE_0873;Note=multi-dom%3B label: PRK10401;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31721 31895 . + . ID=id-GGE_0873-2;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31727 31886 . + . ID=id-GGE_0873-3;Dbxref=InterPro:IPR000843;Note=ProfileScan:PS50932~hth_laci_2~transcription regulator hth%2C laci;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31730 31889 . + . ID=id-GGE_0873-4;Note=Gene3D:1.10.260.40;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31730 31859 . + . ID=id-GGE_0873-5;Dbxref=InterPro:IPR000843,PFAM:PF00356;Note=laci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31730 31754 . + . ID=id-GGE_0873-6;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31733 31778 . + . ID=id-GGE_0873-7;Dbxref=InterPro:IPR000843;Note=PatternScan:PS00356~hth_laci_1~transcription regulator hth%2C laci;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31736 31874 . + . ID=id-GGE_0873-8;Note=specific~superfamily%3B label: HTH_LacI;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31898 32372 . + . ID=id-GGE_0873-9;Dbxref=InterPro:IPR001761,PFAM:PF00532;Note=peripla_bp_1~periplasmic binding protein/laci transcriptional regulator;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31898 32045 . + . ID=id-GGE_0873-10;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31901 32534 . + . ID=id-GGE_0873-11;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31937 32492 . + . ID=id-GGE_0873-12;Note=specific~superfamily%3B label: PBP1_GalS_like;gbkey=misc_feature;gene=galR;locus_tag=GGE_0873 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31754 31760 . - . ID=id-AFQR01000016.1:31754..31760;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 31760 31898 . - . ID=id-AFQR01000016.1:31760..31898;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32213 32222 . - . ID=id-AFQR01000016.1:32213..32222;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 32905 33900 . + . ID=gene-GGE_0874;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank CDS 32905 33900 . + 0 ID=cds-EGT82298.1;Parent=gene-GGE_0874;Dbxref=GeneID:1169276,InterPro:IPR001761,PFAM:PF00532,NCBI_GP:EGT82298.1;Name=EGT82298.1;gbkey=CDS;gene=mglB;locus_tag=GGE_0874;product=D-galactose-binding periplasmic protein;protein_id=EGT82298.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32905 33898 . + . ID=id-GGE_0874;Note=multi-dom%3B label: RbsB;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32920 32965 . + . ID=id-GGE_0874-2;Note=transmembrane_regions;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32983 33817 . + . ID=id-GGE_0874-3;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32989 33787 . + . ID=id-GGE_0874-4;Note=specific~superfamily%3B label: PBP1_GGBP;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32989 33577 . + . ID=id-GGE_0874-5;Dbxref=InterPro:IPR001761,PFAM:PF00532;Note=peripla_bp_1~periplasmic binding protein/laci transcriptional regulator;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 32989 33259 . + . ID=id-GGE_0874-6;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 33343 33343 . + . ID=id-GGE_0874-7;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=mglB;locus_tag=GGE_0874 GCA_000222085.2|AFQR01000016.1 Genbank gene 33966 35486 . + . ID=gene-GGE_0875;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank CDS 33966 35486 . + 0 ID=cds-EGT82299.1;Parent=gene-GGE_0875;Dbxref=GeneID:1170944,InterPro:IPR003439,InterPro:IPR015862,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT82299.1;Name=EGT82299.1;Ontology_term=GO:0008643,GO:0016020,GO:0005524,GO:0016887,GO:0043211;gbkey=CDS;gene=mglA;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,carbohydrate-transporting ATPase activity|0043211||;go_process=carbohydrate transport|0008643||;locus_tag=GGE_0875;product=Galactose/methyl galactoside import ATP-binding protein MglA;protein_id=EGT82299.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 33996 34644 . + . ID=id-GGE_0875;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34002 35079 . + . ID=id-GGE_0875-2;Note=HMMPanther:PTHR24220:SF114~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34005 35448 . + . ID=id-GGE_0875-3;Dbxref=InterPro:IPR015862;Note=ProfileScan:PS51260~mgla~abc transporter%2C galactose import%2C mgla;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34008 34674 . + . ID=id-GGE_0875-4;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34008 34617 . + . ID=id-GGE_0875-5;Note=specific~superfamily%3B label: ABC_Carb_Monos_I;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34014 35439 . + . ID=id-GGE_0875-6;Note=multi-dom%3B label: PRK10982;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34014 34605 . + . ID=id-GGE_0875-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34125 34344 . + . ID=id-GGE_0875-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=mglA;locus_tag=GGE_0875 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34011 35187 . - . ID=id-AFQR01000016.1:34011..35187;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34353 34884 . - . ID=id-AFQR01000016.1:34353..34884;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34632 34755 . - . ID=id-AFQR01000016.1:34632..34755;Note=specific~superfamily%3B label: ABC_Carb_Monos_II;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34671 34752 . - . ID=id-AFQR01000016.1:34671..34752;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34674 34752 . - . ID=id-AFQR01000016.1:34674..34752;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 34689 34764 . - . ID=id-AFQR01000016.1:34689..34764;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 35505 36515 . + . ID=gene-GGE_0876;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=GGE_0876 GCA_000222085.2|AFQR01000016.1 Genbank CDS 35505 36515 . + 0 ID=cds-EGT82300.1;Parent=gene-GGE_0876;Dbxref=GeneID:1170945,InterPro:IPR001851,PFAM:PF02653,NCBI_GP:EGT82300.1;Name=EGT82300.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=mglC;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0876;product=Galactoside transport system permease protein mglC;protein_id=EGT82300.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35541 36474 . + . ID=id-GGE_0876;Note=HMMPanther:PTHR10426:SF2~strictosidine synthase-related~HMMPanther:PTHR10426~family not named;gbkey=misc_feature;gene=mglC;locus_tag=GGE_0876 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35565 35574 . + . ID=id-GGE_0876-2;Note=transmembrane_regions;gbkey=misc_feature;gene=mglC;locus_tag=GGE_0876 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35631 36357 . + . ID=id-GGE_0876-3;Dbxref=InterPro:IPR001851,PFAM:PF02653;Note=bpd_transp_2~abc transporter%2C permease;gbkey=misc_feature;gene=mglC;locus_tag=GGE_0876 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35700 36297 . + . ID=id-GGE_0876-4;Note=specific~superfamily%3B label: TM_PBP1_branched-chain-AA_like superfamily;gbkey=misc_feature;gene=mglC;locus_tag=GGE_0876 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35535 36060 . - . ID=id-AFQR01000016.1:35535..36060;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35541 35664 . - . ID=id-AFQR01000016.1:35541..35664;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35553 35853 . - . ID=id-AFQR01000016.1:35553..35853;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35565 35652 . - . ID=id-AFQR01000016.1:35565..35652;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35574 36420 . - . ID=id-AFQR01000016.1:35574..36420;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35574 36198 . - . ID=id-AFQR01000016.1:35574..36198;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35574 36033 . - . ID=id-AFQR01000016.1:35574..36033;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35574 35907 . - . ID=id-AFQR01000016.1:35574..35907;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35574 35820 . - . ID=id-AFQR01000016.1:35574..35820;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35586 36324 . - . ID=id-AFQR01000016.1:35586..36324;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 35598 36309 . - . ID=id-AFQR01000016.1:35598..36309;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 36676 37410 . + . ID=gene-GGE_0877;Name=GGE_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0877 GCA_000222085.2|AFQR01000016.1 Genbank CDS 36676 37410 . + 0 ID=cds-EGT82301.1;Parent=gene-GGE_0877;Dbxref=GeneID:1175310,NCBI_GP:EGT82301.1;Name=EGT82301.1;Note=HI_0825;gbkey=CDS;locus_tag=GGE_0877;product=hypothetical protein;protein_id=EGT82301.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36742 36745 . + . ID=id-GGE_0877;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0877 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36742 37012 . - . ID=id-AFQR01000016.1:36742..37012;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36745 37315 . - . ID=id-AFQR01000016.1:36745..37315;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36745 37237 . - . ID=id-AFQR01000016.1:36745..37237;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36745 37108 . - . ID=id-AFQR01000016.1:36745..37108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36745 36997 . - . ID=id-AFQR01000016.1:36745..36997;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36745 36868 . - . ID=id-AFQR01000016.1:36745..36868;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 36952 36961 . - . ID=id-AFQR01000016.1:36952..36961;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 37416 37973 . + . ID=gene-GGE_0878;Name=ispZ;gbkey=Gene;gene=ispZ;gene_biotype=protein_coding;locus_tag=GGE_0878 GCA_000222085.2|AFQR01000016.1 Genbank CDS 37416 37973 . + 0 ID=cds-EGT82302.1;Parent=gene-GGE_0878;Dbxref=GeneID:166218395,InterPro:IPR006008,PFAM:PF04279,TIGRFAM:TIGR00997,NCBI_GP:EGT82302.1;Name=EGT82302.1;Ontology_term=GO:0016021;gbkey=CDS;gene=ispZ;go_component=integral to membrane|0016021||;locus_tag=GGE_0878;product=Putative intracellular septation protein;protein_id=EGT82302.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37416 37953 . + . ID=id-GGE_0878;Note=superfamily%3B label: IspA superfamily;gbkey=misc_feature;gene=ispZ;locus_tag=GGE_0878 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37416 37950 . + . ID=id-GGE_0878-2;Dbxref=InterPro:IPR006008,TIGRFAM:TIGR00997;Note=ispz: intracellular septation protein a~intracellular septation protein a;gbkey=misc_feature;gene=ispZ;locus_tag=GGE_0878 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37416 37947 . + . ID=id-GGE_0878-3;Dbxref=InterPro:IPR006008;Note=HAMAP:MF_00189~ispz~intracellular septation protein a;gbkey=misc_feature;gene=ispZ;locus_tag=GGE_0878 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37416 37941 . + . ID=id-GGE_0878-4;Dbxref=InterPro:IPR006008,PFAM:PF04279;Note=ispa~intracellular septation protein a;gbkey=misc_feature;gene=ispZ;locus_tag=GGE_0878 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37473 37650 . - . ID=id-AFQR01000016.1:37473..37650;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37473 37575 . - . ID=id-AFQR01000016.1:37473..37575;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37476 37479 . - . ID=id-AFQR01000016.1:37476..37479;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37485 37869 . - . ID=id-AFQR01000016.1:37485..37869;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 37485 37764 . - . ID=id-AFQR01000016.1:37485..37764;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 37973 38452 . + . ID=gene-GGE_0879;Name=GGE_0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank CDS 37973 38452 . + 0 ID=cds-EGT82303.1;Parent=gene-GGE_0879;Dbxref=GeneID:1175670,InterPro:IPR006683,PFAM:PF03061,NCBI_GP:EGT82303.1;Name=EGT82303.1;Note=HI_0827;gbkey=CDS;locus_tag=GGE_0879;product=putative thioesterase superfamily;protein_id=EGT82303.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38006 38399 . + . ID=id-GGE_0879;Note=superfamily:SSF54637~thioesterase/thiol ester dehydrase-isomerase;gbkey=misc_feature;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38012 38342 . + . ID=id-GGE_0879-2;Note=specific~superfamily%3B label: BFIT_BACH;gbkey=misc_feature;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38024 38309 . + . ID=id-GGE_0879-3;Note=HMMPanther:PTHR11049~family not named;gbkey=misc_feature;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38030 38372 . + . ID=id-GGE_0879-4;Note=Gene3D:3.10.129.10;gbkey=misc_feature;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38066 38192 . + . ID=id-GGE_0879-5;Dbxref=InterPro:IPR006683,PFAM:PF03061;Note=4hbt~thioesterase superfamily;gbkey=misc_feature;locus_tag=GGE_0879 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38009 38252 . - . ID=id-AFQR01000016.1:38009..38252;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 38468 38764 . + . ID=gene-GGE_0880;Name=GGE_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0880 GCA_000222085.2|AFQR01000016.1 Genbank CDS 38468 38764 . + 0 ID=cds-EGT82304.1;Parent=gene-GGE_0880;Dbxref=GeneID:1175675,InterPro:IPR005545,InterPro:IPR011008,PFAM:PF03795,NCBI_GP:EGT82304.1;Name=EGT82304.1;Note=HI_0828;gbkey=CDS;locus_tag=GGE_0880;product=putative yCII-like protein;protein_id=EGT82304.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38468 38762 . + . ID=id-GGE_0880;Dbxref=InterPro:IPR011008;Note=superfamily~superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel~Gene3D:3.30.70.1060%3B label: YCII superfamily;gbkey=misc_feature;locus_tag=GGE_0880 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38468 38753 . + . ID=id-GGE_0880-2;Dbxref=InterPro:IPR005545,PFAM:PF03795;Note=ycii~ycii-related;gbkey=misc_feature;locus_tag=GGE_0880 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38510 38534 . + . ID=id-GGE_0880-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0880 GCA_000222085.2|AFQR01000016.1 Genbank gene 38790 40571 . + . ID=gene-GGE_0881;Name=slt;gbkey=Gene;gene=slt;gene_biotype=protein_coding;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank CDS 38790 40571 . + 0 ID=cds-EGT82305.1;Parent=gene-GGE_0881;Dbxref=InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR008939,InterPro:IPR011989,InterPro:IPR012289,InterPro:IPR016026,InterPro:IPR023346,PFAM:PF01464,NCBI_GP:EGT82305.1;Name=EGT82305.1;Ontology_term=GO:0000270,GO:0016020,GO:0042597,GO:0005488,GO:0004553,GO:0008933;gbkey=CDS;gene=slt;go_component=membrane|0016020||,periplasmic space|0042597||;go_function=binding|0005488||,hydrolase activity hydrolyzing O-glycosyl compounds|0004553||,lytic transglycosylase activity|0008933||;go_process=peptidoglycan metabolic process|0000270||;locus_tag=GGE_0881;product=Putative soluble lytic murein transglycosylase;protein_id=EGT82305.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38931 39927 . + . ID=id-GGE_0881;Dbxref=InterPro:IPR016026;Note=superfamily:SSF48435~bacterial muramidases~lytic transglycosylase%2C superhelical u-shaped and linker domain;gbkey=misc_feature;gene=slt;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38979 38988 . + . ID=id-GGE_0881-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=slt;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39024 39027 . + . ID=id-GGE_0881-3;Dbxref=InterPro:IPR011989;Note=Gene3D:1.25.10.10~armadillo-like helical;gbkey=misc_feature;gene=slt;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39261 39330 . + . ID=id-GGE_0881-4;Dbxref=InterPro:IPR008939;Note=Gene3D:1.25.20.10~lytic transglycosylase%2C superhelical u-shaped;gbkey=misc_feature;gene=slt;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39315 40047 . + . ID=id-GGE_0881-5;Note=multi-dom%3B label: PRK11619;gbkey=misc_feature;gene=slt;locus_tag=GGE_0881 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38877 40137 . - . ID=id-AFQR01000016.1:38877..40137;Dbxref=InterPro:IPR000189;Note=PatternScan:PS00922~transglycosylase~prokaryotic transglycosylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 38997 39846 . - . ID=id-AFQR01000016.1:38997..39846;Dbxref=InterPro:IPR012289;Note=Gene3D:1.10.1240.20~lytic transglycosylase%2C superhelical linker;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39123 40083 . - . ID=id-AFQR01000016.1:39123..40083;Dbxref=InterPro:IPR008258,PFAM:PF01464;Note=slt~lytic transglycosylase-like%2C catalytic;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39162 40125 . - . ID=id-AFQR01000016.1:39162..40125;Note=specific~superfamily%3B label: LT_GEWL;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39207 40101 . - . ID=id-AFQR01000016.1:39207..40101;Note=HMMPanther:PTHR21666:SF46~subfamily not named~HMMPanther:PTHR21666~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39267 40059 . - . ID=id-AFQR01000016.1:39267..40059;Note=Gene3D:1.10.530.10;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39291 40068 . - . ID=id-AFQR01000016.1:39291..40068;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 39737 39746 . - . ID=id-AFQR01000016.1:39737..39746;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 40609 41130 . + . ID=gene-GGE_0882;Name=GGE_0882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank CDS 40609 41130 . + 0 ID=cds-EGT82306.1;Parent=gene-GGE_0882;Dbxref=InterPro:IPR000831,InterPro:IPR010921,InterPro:IPR013335,PFAM:PF01371,TIGRFAM:TIGR01321,NCBI_GP:EGT82306.1;Name=EGT82306.1;Note=Hypothetical trp repressor;Ontology_term=GO:0006355,GO:0005622,GO:0043565,GO:0003700,GO:0016564;gbkey=CDS;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||,transcription repressor activity|0016564||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0882;product=putative trp repressor;protein_id=EGT82306.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40609 40900 . + . ID=id-GGE_0882;Dbxref=InterPro:IPR010921;Note=superfamily:SSF48295~trpr-like~trp repressor/replication initiator;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40609 40894 . + . ID=id-GGE_0882-2;Dbxref=InterPro:IPR000831,InterPro:IPR013335,TIGRFAM:TIGR01321;Note=trpr: trp operon repressor~trp repressor%2C bacterial~Gene3D:1.10.1270.10~trp repressor;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40615 40906 . + . ID=id-GGE_0882-3;Note=superfamily%3B label: Trp_repressor superfamily;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40627 40891 . + . ID=id-GGE_0882-4;Dbxref=InterPro:IPR013335;Note=HAMAP:MF_00475~trp_repressor~trp repressor%2C bacterial;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40633 40870 . + . ID=id-GGE_0882-5;Dbxref=InterPro:IPR000831,PFAM:PF01371;Note=trp_repressor~trp repressor;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40633 40864 . + . ID=id-GGE_0882-6;Dbxref=InterPro:IPR013335;Note=BlastProDom:PD012582~q4qm70_haei8_q4qm70~trp repressor%2C bacterial;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40971 41019 . + . ID=id-GGE_0882-7;Note=seg;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40974 41022 . + . ID=id-GGE_0882-8;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0882 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40672 40987 . - . ID=id-AFQR01000016.1:40672..40987;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40678 40993 . - . ID=id-AFQR01000016.1:40678..40993;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40923 40932 . - . ID=id-AFQR01000016.1:40923..40932;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000016.1 Genbank gene 40953 41639 . + . ID=gene-GGE_0883;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank CDS 40953 41639 . + 0 ID=cds-EGT82307.1;Parent=gene-GGE_0883;Dbxref=GeneID:1176851,InterPro:IPR001264,InterPro:IPR011812,PFAM:PF00912,TIGRFAM:TIGR02070,NCBI_GP:EGT82307.1;Name=EGT82307.1;Ontology_term=GO:0009252,GO:0016021,GO:0009274,GO:0003824,GO:0016763;gbkey=CDS;gene=mtgA;go_component=integral to membrane|0016021||,peptidoglycan-based cell wall|0009274||;go_function=catalytic activity|0003824||,transferase activity transferring pentosyl groups|0016763||;go_process=peptidoglycan biosynthetic process|0009252||;locus_tag=GGE_0883;product=Monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=EGT82307.1;transl_table=11 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 40953 41622 . + . ID=id-GGE_0883;Dbxref=InterPro:IPR011812,TIGRFAM:TIGR02070;Note=mono_pep_trsgly: monofunctional biosy~monofunctional biosynthetic peptidoglycan transglycosylase~HAMAP:MF_00766~mono_pep_trsgly~monofunctional biosynthetic peptidoglycan transglycosylase;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 41037 41547 . + . ID=id-GGE_0883-2;Note=superfamily%3B label: Transgly superfamily;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 41103 41457 . + . ID=id-GGE_0883-3;Dbxref=InterPro:IPR001264,PFAM:PF00912;Note=transgly~glycosyl transferase%2C family 51;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 41160 41628 . + . ID=id-GGE_0883-4;Note=superfamily%3B label: Transgly superfamily;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 41160 41622 . + . ID=id-GGE_0883-5;Dbxref=InterPro:IPR011812,TIGRFAM:TIGR02070;Note=mono_pep_trsgly: monofunctional biosy~monofunctional biosynthetic peptidoglycan transglycosylase;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 GCA_000222085.2|AFQR01000016.1 Genbank sequence_feature 41160 41604 . + . ID=id-GGE_0883-6;Dbxref=InterPro:IPR001264,PFAM:PF00912;Note=transgly~glycosyl transferase%2C family 51;gbkey=misc_feature;gene=mtgA;locus_tag=GGE_0883 ##sequence-region AFQR01000015.1 1 106225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000015.1 Genbank region 1 106225 . + . ID=AFQR01000015.1:1..106225;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000015.1 Genbank gene 809 1348 . - . ID=gene-GGE_0734;Name=GGE_0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0734 GCA_000222085.2|AFQR01000015.1 Genbank CDS 809 1348 . - 0 ID=cds-EGT82336.1;Parent=gene-GGE_0734;Dbxref=InterPro:IPR007339,PFAM:PF04224,NCBI_GP:EGT82336.1;Name=EGT82336.1;Note=HI_0219;gbkey=CDS;locus_tag=GGE_0734;product=hypothetical protein;protein_id=EGT82336.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 809 1337 . - . ID=id-GGE_0734;Note=superfamily%3B label: DUF417 superfamily;gbkey=misc_feature;locus_tag=GGE_0734 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 809 1325 . - . ID=id-GGE_0734-2;Dbxref=InterPro:IPR007339,PFAM:PF04224;Note=duf417~protein of unknown function duf417;gbkey=misc_feature;locus_tag=GGE_0734 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 845 1103 . + . ID=id-AFQR01000015.1:845..1103;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 878 1106 . + . ID=id-AFQR01000015.1:878..1106;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 878 1028 . + . ID=id-AFQR01000015.1:878..1028;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 1618 2034 . - . ID=gene-GGE_0735;Name=GGE_0735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0735 GCA_000222085.2|AFQR01000015.1 Genbank CDS 1618 2034 . - 0 ID=cds-EGT82337.1;Parent=gene-GGE_0735;Dbxref=NCBI_GP:EGT82337.1;Name=EGT82337.1;Note=Hypothetical phosphoribosylformylglycinamidine synthase;gbkey=CDS;locus_tag=GGE_0735;product=putative phosphoribosylformylglycinamidine synthase;protein_id=EGT82337.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 1618 2032 . - . ID=id-GGE_0735;Note=superfamily:SSF52317~class i glutamine amidotransferase-like~HMMPanther:PTHR10099~phosphoribosylformylglycinamidine synthase;gbkey=misc_feature;locus_tag=GGE_0735 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 1618 2020 . - . ID=id-GGE_0735-2;Note=superfamily%3B label: GAT_1 superfamily;gbkey=misc_feature;locus_tag=GGE_0735 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 1624 1933 . - . ID=id-GGE_0735-3;Note=Gene3D:3.40.50.880;gbkey=misc_feature;locus_tag=GGE_0735 GCA_000222085.2|AFQR01000015.1 Genbank gene 2044 5613 . - . ID=gene-GGE_0736;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank CDS 2044 5613 . - 0 ID=cds-EGT82338.1;Parent=gene-GGE_0736;Dbxref=InterPro:IPR000728,InterPro:IPR010073,InterPro:IPR010918,InterPro:IPR016188,InterPro:IPR017926,PFAM:PF00586,PFAM:PF02769,TIGRFAM:TIGR01735,NCBI_GP:EGT82338.1;Name=EGT82338.1;Ontology_term=GO:0006189,GO:0003824,GO:0004642;gbkey=CDS;gene=purL;go_function=catalytic activity|0003824||,phosphoribosylformylglycinamidine synthase activity|0004642||;go_process='de novo' IMP biosynthetic process|0006189||;locus_tag=GGE_0736;product=Phosphoribosylformylglycinamidine synthase;protein_id=EGT82338.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2065 2104 . - . ID=id-GGE_0736;Note=transmembrane_regions;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2149 5503 . - . ID=id-GGE_0736-2;Note=HMMPanther:PTHR10099~phosphoribosylformylglycinamidine synthase;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2149 2503 . - . ID=id-GGE_0736-3;Note=superfamily:SSF82697~purs-like;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2158 5500 . - . ID=id-GGE_0736-4;Dbxref=InterPro:IPR010073,TIGRFAM:TIGR01735;Note=fgam_synt: phosphoribosylformylglycinamidin~phosphoribosylformylglycinamidine synthase;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2626 4528 . - . ID=id-GGE_0736-5;Note=multi-dom%3B label: PurL;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2764 3229 . - . ID=id-GGE_0736-6;Note=specific~superfamily%3B label: PurL_repeat1;gbkey=misc_feature;gene=purL;locus_tag=GGE_0736 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2077 5323 . + . ID=id-AFQR01000015.1:2077..5323;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2248 2608 . + . ID=id-AFQR01000015.1:2248..2608;Note=superfamily:SSF109736~fgam synthase purl%2C linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2356 5272 . + . ID=id-AFQR01000015.1:2356..5272;Note=Gene3D:3.40.50.880;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2377 5278 . + . ID=id-AFQR01000015.1:2377..5278;Note=superfamily%3B label: GAT_1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2380 5278 . + . ID=id-AFQR01000015.1:2380..5278;Dbxref=InterPro:IPR017926;Note=ProfileScan:PS51273~gatase_type_1~glutamine amidotransferase type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2404 5254 . + . ID=id-AFQR01000015.1:2404..5254;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2440 2920 . + . ID=id-AFQR01000015.1:2440..2920;Dbxref=InterPro:IPR000728,PFAM:PF00586;Note=airs~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2461 4630 . + . ID=id-AFQR01000015.1:2461..4630;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2518 3442 . + . ID=id-AFQR01000015.1:2518..3442;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2605 3436 . + . ID=id-AFQR01000015.1:2605..3436;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2644 3997 . + . ID=id-AFQR01000015.1:2644..3997;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2668 2812 . + . ID=id-AFQR01000015.1:2668..2812;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2695 4603 . + . ID=id-AFQR01000015.1:2695..4603;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 2890 4183 . + . ID=id-AFQR01000015.1:2890..4183;Note=specific~superfamily%3B label: PurL_repeat2;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 3812 3821 . + . ID=id-AFQR01000015.1:3812..3821;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5117 5126 . + . ID=id-AFQR01000015.1:5117..5126;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 5642 6466 . - . ID=gene-GGE_0737;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank CDS 5642 6466 . - 0 ID=cds-EGT82339.1;Parent=gene-GGE_0737;Dbxref=GeneID:1169225,InterPro:IPR001653,InterPro:IPR018510,PFAM:PF01678,TIGRFAM:TIGR00652,NCBI_GP:EGT82339.1;Name=EGT82339.1;Ontology_term=GO:0009089,GO:0005737,GO:0008837;gbkey=CDS;gene=dapF;go_component=cytoplasm|0005737||;go_function=diaminopimelate epimerase activity|0008837||;go_process=lysine biosynthetic process via diaminopimelate|0009089||;locus_tag=GGE_0737;product=Diaminopimelate epimerase;protein_id=EGT82339.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5642 6464 . - . ID=id-GGE_0737;Dbxref=InterPro:IPR001653,TIGRFAM:TIGR00652;Note=multi-dom~superfamily:SSF54506~diaminopimelate epimerase-like~dapf: diaminopimelate epimerase~diaminopimelate epimerase~HAMAP:MF_00197~dap_epimerase~diaminopimelate epimerase%3B label: dapF;gbkey=misc_feature;gene=dapF;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5642 6002 . - . ID=id-GGE_0737-2;Note=Gene3D:3.10.310.10;gbkey=misc_feature;gene=dapF;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5651 6005 . - . ID=id-GGE_0737-3;Note=superfamily%3B label: DAP_epimerase superfamily;gbkey=misc_feature;gene=dapF;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5651 5999 . - . ID=id-GGE_0737-4;Dbxref=InterPro:IPR001653,PFAM:PF01678;Note=dap_epimerase~diaminopimelate epimerase;gbkey=misc_feature;gene=dapF;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6005 6068 . - . ID=id-GGE_0737-5;Note=Gene3D:3.10.310.10;gbkey=misc_feature;gene=dapF;locus_tag=GGE_0737 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5681 6290 . + . ID=id-AFQR01000015.1:5681..6290;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5687 5834 . + . ID=id-AFQR01000015.1:5687..5834;Dbxref=InterPro:IPR018510;Note=PatternScan:PS01326~dap_epimerase~diaminopimelate epimerase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 5990 6098 . + . ID=id-AFQR01000015.1:5990..6098;Dbxref=InterPro:IPR001653,PFAM:PF01678;Note=superfamily~dap_epimerase~diaminopimelate epimerase%3B label: DAP_epimerase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6579 6588 . - . ID=id-AFQR01000015.1:6579..6588;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 6609 7232 . - . ID=gene-GGE_0738;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank CDS 6609 7232 . - 0 ID=cds-EGT82340.1;Parent=gene-GGE_0738;Dbxref=GeneID:166224571,InterPro:IPR006197,InterPro:IPR006199,InterPro:IPR006200,InterPro:IPR011056,InterPro:IPR011991,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,PFAM:PF01726,TIGRFAM:TIGR00498,NCBI_GP:EGT82340.1;Name=EGT82340.1;Ontology_term=GO:0006508,GO:0045449,GO:0003677,GO:0004252;gbkey=CDS;gene=lexA;go_function=DNA binding|0003677||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||,regulation of transcription|0045449||;locus_tag=GGE_0738;product=LexA repressor;protein_id=EGT82340.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6609 7227 . - . ID=id-GGE_0738;Dbxref=InterPro:IPR006200,TIGRFAM:TIGR00498;Note=lexa: repressor lexa~peptidase s24%2C lexa repressor;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6609 6816 . - . ID=id-GGE_0738-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6609 6804 . - . ID=id-GGE_0738-3;Dbxref=InterPro:IPR006199,PFAM:PF01726;Note=superfamily~lexa_dna_bind~lexa%2C dna-binding domain%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6615 6822 . - . ID=id-GGE_0738-4;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6618 7215 . - . ID=id-GGE_0738-5;Dbxref=InterPro:IPR006200;Note=multi-dom~HAMAP:MF_00015~lexa~peptidase s24%2C lexa repressor%3B label: PRK00215;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6840 6990 . - . ID=id-GGE_0738-6;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6849 6981 . - . ID=id-GGE_0738-7;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature;gene=lexA;locus_tag=GGE_0738 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6642 6954 . + . ID=id-AFQR01000015.1:6642..6954;Dbxref=InterPro:IPR006197;Note=FPrintScan:PR00726~lexaserptase~peptidase s24%2C lexa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6645 6987 . + . ID=id-AFQR01000015.1:6645..6987;Dbxref=InterPro:IPR006197;Note=FPrintScan:PR00726~lexaserptase~peptidase s24%2C lexa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6648 7071 . + . ID=id-AFQR01000015.1:6648..7071;Dbxref=InterPro:IPR006197;Note=FPrintScan:PR00726~lexaserptase~peptidase s24%2C lexa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6813 6963 . + . ID=id-AFQR01000015.1:6813..6963;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 6846 6954 . + . ID=id-AFQR01000015.1:6846..6954;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 7365 9836 . + . ID=gene-GGE_0739;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=GGE_0739 GCA_000222085.2|AFQR01000015.1 Genbank CDS 7365 9836 . + 0 ID=cds-EGT82341.1;Parent=gene-GGE_0739;Dbxref=GeneID:166220575,InterPro:IPR002123,InterPro:IPR022284,PFAM:PF01553,TIGRFAM:TIGR03703,NCBI_GP:EGT82341.1;Name=EGT82341.1;Ontology_term=GO:0008152,GO:0008654,GO:0008415,GO:0004366;gbkey=CDS;gene=plsB;go_function=acyltransferase activity|0008415||,glycerol-3-phosphate O-acyltransferase activity|0004366||;go_process=metabolic process|0008152||,phospholipid biosynthetic process|0008654||;locus_tag=GGE_0739;product=Glycerol-3-phosphate acyltransferase;protein_id=EGT82341.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7410 9786 . + . ID=id-GGE_0739;Note=multi-dom%3B label: PlsB;gbkey=misc_feature;gene=plsB;locus_tag=GGE_0739 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7413 9666 . + . ID=id-GGE_0739-2;Note=HMMPanther:PTHR12563:SF3~dihydroxyacetone phosphate acyltransferase~HMMPanther:PTHR12563~family not named;gbkey=misc_feature;gene=plsB;locus_tag=GGE_0739 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7440 9729 . + . ID=id-GGE_0739-3;Dbxref=InterPro:IPR022284,TIGRFAM:TIGR03703;Note=plsb: glycerol-3-phosphate o-acyltransferase~glycerol-3-phosphate o-acyltransferase plsb;gbkey=misc_feature;gene=plsB;locus_tag=GGE_0739 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7446 9747 . + . ID=id-GGE_0739-4;Dbxref=InterPro:IPR022284;Note=HAMAP:MF_00393~glyc3p_acyltrans~glycerol-3-phosphate o-acyltransferase plsb;gbkey=misc_feature;gene=plsB;locus_tag=GGE_0739 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7431 8088 . - . ID=id-AFQR01000015.1:7431..8088;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7791 8256 . - . ID=id-AFQR01000015.1:7791..8256;Dbxref=InterPro:IPR002123,PFAM:PF01553;Note=acyltransferase~phospholipid/glycerol acyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 7959 8253 . - . ID=id-AFQR01000015.1:7959..8253;Note=specific~superfamily%3B label: LPLAT_DHAPAT-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 8007 8295 . - . ID=id-AFQR01000015.1:8007..8295;Note=superfamily:SSF69593~glycerol-3-phosphate (1)-acyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 10240 11292 . - . ID=gene-GGE_0740;Name=GGE_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0740 GCA_000222085.2|AFQR01000015.1 Genbank CDS 10240 11292 . - 0 ID=cds-EGT82342.1;Parent=gene-GGE_0740;Dbxref=GeneID:21431815,InterPro:IPR001188,InterPro:IPR006059,PFAM:PF01547,NCBI_GP:EGT82342.1;Name=EGT82342.1;Note=potD-A;Ontology_term=GO:0006810,GO:0030288,GO:0005215;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0740;product=Spermidine/putrescine-binding periplasmic protein 2;protein_id=EGT82342.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10240 11284 . - . ID=id-GGE_0740;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0740 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10246 11284 . - . ID=id-GGE_0740-2;Note=multi-dom%3B label: PotD;gbkey=misc_feature;locus_tag=GGE_0740 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10321 11212 . - . ID=id-GGE_0740-3;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0740 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10369 10975 . - . ID=id-GGE_0740-4;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;locus_tag=GGE_0740 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10282 10525 . + . ID=id-AFQR01000015.1:10282..10525;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10285 10696 . + . ID=id-AFQR01000015.1:10285..10696;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10285 10477 . + . ID=id-AFQR01000015.1:10285..10477;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10291 10618 . + . ID=id-AFQR01000015.1:10291..10618;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10291 10339 . + . ID=id-AFQR01000015.1:10291..10339;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10300 10993 . + . ID=id-AFQR01000015.1:10300..10993;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10300 10861 . + . ID=id-AFQR01000015.1:10300..10861;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10300 10750 . + . ID=id-AFQR01000015.1:10300..10750;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10306 10387 . + . ID=id-AFQR01000015.1:10306..10387;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10321 11128 . + . ID=id-AFQR01000015.1:10321..11128;Dbxref=InterPro:IPR001188;Note=FPrintScan:PR00909~spermdnbndng~bacterial periplasmic spermidine/putrescine-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10381 11053 . + . ID=id-AFQR01000015.1:10381..11053;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 10645 10648 . + . ID=id-AFQR01000015.1:10645..10648;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11234 11243 . + . ID=id-AFQR01000015.1:11234..11243;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 11434 12729 . + . ID=gene-GGE_0741;Name=ordL;gbkey=Gene;gene=ordL;gene_biotype=protein_coding;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank CDS 11434 12729 . + 0 ID=cds-EGT82343.1;Parent=gene-GGE_0741;Dbxref=GeneID:1175687,InterPro:IPR006076,PFAM:PF01266,NCBI_GP:EGT82343.1;Name=EGT82343.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ordL;go_function=oxidoreductase activity|0016491||;locus_tag=GGE_0741;product=Putative oxidoreductase ordL;protein_id=EGT82343.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11509 12538 . + . ID=id-GGE_0741;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11515 12550 . + . ID=id-GGE_0741-2;Note=HMMPanther:PTHR13847:SF20~fad dependent oxidoreductase~HMMPanther:PTHR13847~family not named;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11527 12535 . + . ID=id-GGE_0741-3;Note=multi-dom%3B label: DadA;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11530 12526 . + . ID=id-GGE_0741-4;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11536 12493 . + . ID=id-GGE_0741-5;Dbxref=InterPro:IPR006076,PFAM:PF01266;Note=dao~fad dependent oxidoreductase;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 12118 12127 . + . ID=id-GGE_0741-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ordL;locus_tag=GGE_0741 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 11578 12481 . - . ID=id-AFQR01000015.1:11578..12481;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 12768 13166 . - . ID=gene-GGE_0742;Name=GGE_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0742 GCA_000222085.2|AFQR01000015.1 Genbank CDS 12768 13166 . - 0 ID=cds-EGT82344.1;Parent=gene-GGE_0742;Dbxref=GeneID:1176263,InterPro:IPR011608,NCBI_GP:EGT82344.1;Name=EGT82344.1;Note=HI_0487;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0742;product=putative prd;protein_id=EGT82344.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 12810 13074 . - . ID=id-GGE_0742;Dbxref=InterPro:IPR011608;Note=superfamily:SSF63520~pts-regulatory domain%2C prd~prd;gbkey=misc_feature;locus_tag=GGE_0742 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 12813 13089 . - . ID=id-GGE_0742-2;Dbxref=InterPro:IPR011608;Note=ProfileScan:PS51372~prd_2~prd;gbkey=misc_feature;locus_tag=GGE_0742 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 12930 12939 . - . ID=id-GGE_0742-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0742 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13201 13210 . - . ID=id-AFQR01000015.1:13201..13210;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 13226 13882 . + . ID=gene-GGE_0743;Name=GGE_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank CDS 13226 13882 . + 0 ID=cds-EGT82345.1;Parent=gene-GGE_0743;Dbxref=GeneID:1175252,InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,InterPro:IPR010976,InterPro:IPR023214,PFAM:PF00702,TIGRFAM:TIGR01509,TIGRFAM:TIGR02009,NCBI_GP:EGT82345.1;Name=EGT82345.1;Note=HI_0488;Ontology_term=GO:0008152,GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||,hydrolase activity|0016787||;go_process=metabolic process|0008152||;locus_tag=GGE_0743;product=putative haloacid dehydrogenase/epoxide hydrolase;protein_id=EGT82345.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13289 13802 . + . ID=id-GGE_0743;Note=HMMPanther:PTHR18901~family not named;gbkey=misc_feature;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13298 13790 . + . ID=id-GGE_0743-2;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13310 13772 . + . ID=id-GGE_0743-3;Dbxref=InterPro:IPR010976,TIGRFAM:TIGR02009;Note=multi-dom~pgmb-yqab-sf: beta-phosphoglucomutase fa~beta-phosphoglucomutase hydrolase%3B label: PGMB-YQAB-SF;gbkey=misc_feature;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13316 13766 . + . ID=id-GGE_0743-4;Dbxref=InterPro:IPR006402,TIGRFAM:TIGR01509;Note=had-sf-ia-v3: had hydrolase%2C family ia%2C~had-superfamily hydrolase%2C subfamily ia%2C variant 3;gbkey=misc_feature;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13319 13745 . + . ID=id-GGE_0743-5;Dbxref=InterPro:IPR005834,PFAM:PF00702;Note=hydrolase~haloacid dehalogenase-like hydrolase;gbkey=misc_feature;locus_tag=GGE_0743 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13262 13310 . - . ID=id-AFQR01000015.1:13262..13310;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13277 13685 . - . ID=id-AFQR01000015.1:13277..13685;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13520 13550 . - . ID=id-AFQR01000015.1:13520..13550;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13535 13553 . - . ID=id-AFQR01000015.1:13535..13553;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 13882 14355 . + . ID=gene-GGE_0744;Name=GGE_0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0744 GCA_000222085.2|AFQR01000015.1 Genbank CDS 13882 14355 . + 0 ID=cds-EGT82346.1;Parent=gene-GGE_0744;Dbxref=InterPro:IPR015414,InterPro:IPR020143,PFAM:PF09335,NCBI_GP:EGT82346.1;Name=EGT82346.1;Note=HI_0489;gbkey=CDS;locus_tag=GGE_0744;product=Hypothetical protein;protein_id=EGT82346.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13882 14347 . + . ID=id-GGE_0744;Note=superfamily%3B label: SNARE_assoc superfamily;gbkey=misc_feature;locus_tag=GGE_0744 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13939 14221 . + . ID=id-GGE_0744-2;Dbxref=InterPro:IPR020143;Note=BlastProDom:PD085709~q5ffd5_ehrrg_q5ffd5~uncharacterised protein family%2C rp436;gbkey=misc_feature;locus_tag=GGE_0744 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13942 13951 . + . ID=id-GGE_0744-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0744 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14023 14197 . + . ID=id-GGE_0744-4;Dbxref=InterPro:IPR015414,PFAM:PF09335;Note=snare_assoc~snare associated golgi protein;gbkey=misc_feature;locus_tag=GGE_0744 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13951 14272 . - . ID=id-AFQR01000015.1:13951..14272;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13951 14194 . - . ID=id-AFQR01000015.1:13951..14194;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 13951 14053 . - . ID=id-AFQR01000015.1:13951..14053;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 14831 15334 . + . ID=gene-GGE_0745;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank CDS 14831 15334 . + 0 ID=cds-EGT82347.1;Parent=gene-GGE_0745;Dbxref=InterPro:IPR003815,InterPro:IPR011249,PFAM:PF02664,PIR:PIRSF006160,NCBI_GP:EGT82347.1;Name=EGT82347.1;Ontology_term=GO:0009372,GO:0003824,GO:0005506,GO:0046872;gbkey=CDS;gene=luxS;go_function=catalytic activity|0003824||,iron ion binding|0005506||,metal ion binding|0046872||;go_process=quorum sensing|0009372||;locus_tag=GGE_0745;product=S-ribosylhomocysteine lyase;protein_id=EGT82347.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14831 15329 . + . ID=id-GGE_0745;Dbxref=InterPro:IPR003815;Note=Gene3D:3.30.1360.80~s-ribosylhomocysteinase (luxs);gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14831 15314 . + . ID=id-GGE_0745-2;Dbxref=InterPro:IPR003815,PIR:PIRSF006160;Note=superfamily~autoinducer-2 production protein luxs~s-ribosylhomocysteinase (luxs)%3B label: LuxS superfamily;gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14831 15308 . + . ID=id-GGE_0745-3;Dbxref=InterPro:IPR003815;Note=HAMAP:MF_00091~luxs~s-ribosylhomocysteinase (luxs);gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14840 15314 . + . ID=id-GGE_0745-4;Dbxref=InterPro:IPR011249;Note=superfamily:SSF63411~luxs/mpp-like metallohydrolase~metalloenzyme%2C luxs/m16 peptidase-like%2C metal-binding;gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14840 15308 . + . ID=id-GGE_0745-5;Dbxref=InterPro:IPR003815,PFAM:PF02664;Note=luxs~s-ribosylhomocysteinase (luxs);gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14846 14888 . + . ID=id-GGE_0745-6;Dbxref=InterPro:IPR003815;Note=FPrintScan:PR01487~luxsprotein~s-ribosylhomocysteinase (luxs);gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14855 15299 . + . ID=id-GGE_0745-7;Dbxref=InterPro:IPR003815;Note=BlastProDom:PD013172~luxs_haein_p44007~s-ribosylhomocysteinase (luxs);gbkey=misc_feature;gene=luxS;locus_tag=GGE_0745 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14888 15062 . - . ID=id-AFQR01000015.1:14888..15062;Dbxref=InterPro:IPR003815;Note=FPrintScan:PR01487~luxsprotein~s-ribosylhomocysteinase (luxs);gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14888 14978 . - . ID=id-AFQR01000015.1:14888..14978;Dbxref=InterPro:IPR003815;Note=FPrintScan:PR01487~luxsprotein~s-ribosylhomocysteinase (luxs);gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14888 14915 . - . ID=id-AFQR01000015.1:14888..14915;Dbxref=InterPro:IPR003815;Note=FPrintScan:PR01487~luxsprotein~s-ribosylhomocysteinase (luxs);gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 14891 15194 . - . ID=id-AFQR01000015.1:14891..15194;Dbxref=InterPro:IPR003815;Note=FPrintScan:PR01487~luxsprotein~s-ribosylhomocysteinase (luxs);gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 15343 16524 . + . ID=gene-GGE_0746;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank CDS 15343 16524 . + 0 ID=cds-EGT82348.1;Parent=gene-GGE_0746;Dbxref=InterPro:IPR003135,InterPro:IPR005862,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF02222,TIGRFAM:TIGR01142,NCBI_GP:EGT82348.1;Name=EGT82348.1;Ontology_term=GO:0009152,GO:0005524,GO:0003824,GO:0016742,GO:0016874,GO:0000287;gbkey=CDS;gene=purT;go_function=ATP binding|0005524||,catalytic activity|0003824||,hydroxymethyl- formyl- and related transferase activity|0016742||,ligase activity|0016874||,magnesium ion binding|0000287||;go_process=purine ribonucleotide biosynthetic process|0009152||;locus_tag=GGE_0746;product=Phosphoribosylglycinamide formyltransferase 2;protein_id=EGT82348.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15343 16522 . + . ID=id-GGE_0746;Note=multi-dom%3B label: purT;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15343 16516 . + . ID=id-GGE_0746-2;Dbxref=InterPro:IPR005862;Note=HMMPanther:PTHR23047:SF2~phosphoribosylglycinamide formyltransferase 2~phosphoribosylglycinamide formyltransferase 2~HMMPanther:PTHR23047~family not named;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15349 15676 . + . ID=id-GGE_0746-3;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15358 15691 . + . ID=id-GGE_0746-4;Dbxref=InterPro:IPR013817;Note=Gene3D:3.40.50.20~pre-atp-grasp fold;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15367 16498 . + . ID=id-GGE_0746-5;Dbxref=InterPro:IPR005862;Note=HAMAP:MF_01643~purt~phosphoribosylglycinamide formyltransferase 2;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15385 16480 . + . ID=id-GGE_0746-6;Dbxref=InterPro:IPR005862,TIGRFAM:TIGR01142;Note=purt: phosphoribosylglycinamide formyltransf~phosphoribosylglycinamide formyltransferase 2;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15385 15625 . + . ID=id-GGE_0746-7;Note=superfamily%3B label: CPSase_L_chain superfamily;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15682 15958 . + . ID=id-GGE_0746-8;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15700 15913 . + . ID=id-GGE_0746-9;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15712 15862 . + . ID=id-GGE_0746-10;Note=superfamily%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15712 15859 . + . ID=id-GGE_0746-11;Dbxref=InterPro:IPR003135,PFAM:PF02222;Note=atp-grasp~atp-grasp fold%2C atp-dependent carboxylate-amine ligase-type;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15766 15775 . + . ID=id-GGE_0746-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=purT;locus_tag=GGE_0746 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15568 16300 . - . ID=id-AFQR01000015.1:15568..16300;Dbxref=InterPro:IPR011054;Note=superfamily:SSF51246~rudiment single hybrid motif~rudiment single hybrid motif;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15571 15712 . - . ID=id-AFQR01000015.1:15571..15712;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 15913 15940 . - . ID=id-AFQR01000015.1:15913..15940;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 16530 16539 . + . ID=id-AFQR01000015.1:16530..16539;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 17128 17805 . + . ID=gene-GGE_0747;Name=GGE_0747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0747 GCA_000222085.2|AFQR01000015.1 Genbank CDS 17128 17805 . + 0 ID=cds-EGT82349.1;Parent=gene-GGE_0747;Dbxref=InterPro:IPR012332,NCBI_GP:EGT82349.1;Name=EGT82349.1;Note=Hypothetical phage P22 tailspike;gbkey=CDS;locus_tag=GGE_0747;product=putative phage P22 tailspike;protein_id=EGT82349.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 17167 17185 . + . ID=id-GGE_0747;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0747 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 17149 17158 . - . ID=id-AFQR01000015.1:17149..17158;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 17389 17542 . - . ID=id-AFQR01000015.1:17389..17542;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 18100 19671 . + . ID=gene-GGE_0748;Name=GGE_0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank CDS 18100 19671 . + 0 ID=cds-EGT82350.1;Parent=gene-GGE_0748;Dbxref=InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF03212,PFAM:PF03797,TIGRFAM:TIGR01414,NCBI_GP:EGT82350.1;Name=EGT82350.1;Note=Hypothetical autotransporter beta-domain;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_0748;product=putative autotransporter betadomain-containing protein;protein_id=EGT82350.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18142 18631 . + . ID=id-GGE_0748;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18163 18592 . + . ID=id-GGE_0748-2;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18235 18511 . + . ID=id-GGE_0748-3;Note=superfamily%3B label: PL_Passenger_AT superfamily;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18286 18445 . + . ID=id-GGE_0748-4;Dbxref=InterPro:IPR004899,PFAM:PF03212;Note=pertactin~pertactin%2C central region;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18292 19390 . + . ID=id-GGE_0748-5;Note=HMMPanther:PTHR12338:SF3~subfamily not named~HMMPanther:PTHR12338~family not named;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18331 19441 . + . ID=id-GGE_0748-6;Dbxref=InterPro:IPR006315,TIGRFAM:TIGR01414;Note=autotrans_barl: outer membrane autotra~outer membrane autotransporter barrel;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18778 18991 . + . ID=id-GGE_0748-7;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19546 19555 . + . ID=id-GGE_0748-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0748 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18139 18403 . - . ID=id-AFQR01000015.1:18139..18403;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18190 18646 . - . ID=id-AFQR01000015.1:18190..18646;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18193 18739 . - . ID=id-AFQR01000015.1:18193..18739;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18796 18913 . - . ID=id-AFQR01000015.1:18796..18913;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18799 18916 . - . ID=id-AFQR01000015.1:18799..18916;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 18862 18910 . - . ID=id-AFQR01000015.1:18862..18910;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19694 19703 . + . ID=id-AFQR01000015.1:19694..19703;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19712 19721 . - . ID=id-AFQR01000015.1:19712..19721;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 19735 20742 . - . ID=gene-GGE_0749;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank CDS 19735 20742 . - 0 ID=cds-EGT82351.1;Parent=gene-GGE_0749;Dbxref=GeneID:1169957,InterPro:IPR004464,PFAM:PF03320,PIR:PIRSF004532,TIGRFAM:TIGR00330,NCBI_GP:EGT82351.1;Name=EGT82351.1;Ontology_term=GO:0006071;gbkey=CDS;gene=glpX;go_process=glycerol metabolic process|0006071||;locus_tag=GGE_0749;product=Fructose-1%2C6-bisphosphatase class 2;protein_id=EGT82351.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19735 20740 . - . ID=id-GGE_0749;Dbxref=InterPro:IPR004464,TIGRFAM:TIGR00330;Note=glpx: fructose-1%2C6-bisphosphatase%2C class ii~fructose-1%2C6-bisphosphatase class 2/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19735 20728 . - . ID=id-GGE_0749-2;Dbxref=InterPro:IPR004464,PIR:PIRSF004532;Note=multi-dom~fructose-1%2C6-bisphosphatase%2C glpx type~fructose-1%2C6-bisphosphatase class 2/sedoheputulose-1%2C7-bisphosphatase%3B label: GlpX;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19735 20707 . - . ID=id-GGE_0749-3;Note=superfamily:SSF56655~carbohydrate phosphatase;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19735 20245 . - . ID=id-GGE_0749-4;Note=Gene3D:3.30.540.10;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19741 20692 . - . ID=id-GGE_0749-5;Dbxref=InterPro:IPR004464,PFAM:PF03320;Note=fbpase_glpx~fructose-1%2C6-bisphosphatase class 2/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19744 20689 . - . ID=id-GGE_0749-6;Note=specific~superfamily%3B label: FBPase_glpX;gbkey=misc_feature;gene=glpX;locus_tag=GGE_0749 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 19771 19819 . + . ID=id-AFQR01000015.1:19771..19819;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 20206 20248 . + . ID=id-AFQR01000015.1:20206..20248;Note=Gene3D:3.30.540.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 20903 21121 . + . ID=gene-GGE_0750;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=GGE_0750 GCA_000222085.2|AFQR01000015.1 Genbank CDS 20903 21121 . + 0 ID=cds-EGT82352.1;Parent=gene-GGE_0750;Dbxref=GeneID:1176329,InterPro:IPR009252,PFAM:PF06005,NCBI_GP:EGT82352.1;Name=EGT82352.1;Ontology_term=GO:0000917,GO:0043093,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||;go_process=barrier septum formation|0000917||,cytokinesis by binary fission|0043093||;locus_tag=GGE_0750;product=Cell division protein ZapB;protein_id=EGT82352.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 20903 21119 . + . ID=id-GGE_0750;Dbxref=InterPro:IPR009252,PFAM:PF06005;Note=superfamily~duf904~cell division protein zapb~HAMAP:MF_01196~zapb~cell division protein zapb%3B label: DUF904 superfamily;gbkey=misc_feature;gene=zapB;locus_tag=GGE_0750 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 20921 21095 . + . ID=id-GGE_0750-2;Note=coiled-coil;gbkey=misc_feature;gene=zapB;locus_tag=GGE_0750 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 20942 20966 . - . ID=id-AFQR01000015.1:20942..20966;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 21230 21670 . + . ID=gene-GGE_0751;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank CDS 21230 21670 . + 0 ID=cds-EGT82353.1;Parent=gene-GGE_0751;Dbxref=GeneID:1170957,InterPro:IPR001094,InterPro:IPR008254,PFAM:PF00258,NCBI_GP:EGT82353.1;Name=EGT82353.1;Ontology_term=GO:0055114,GO:0010181,GO:0005506,GO:0016491;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||,iron ion binding|0005506||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0751;product=Protein mioC;protein_id=EGT82353.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21230 21665 . + . ID=id-GGE_0751;Note=superfamily~superfamily:SSF52218~flavoproteins%3B label: FMN_red superfamily;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21236 21662 . + . ID=id-GGE_0751-2;Note=Gene3D:3.40.50.360;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21239 21653 . + . ID=id-GGE_0751-3;Note=HMMPanther:PTHR19384:SF21~subfamily not named~HMMPanther:PTHR19384~family not named;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21239 21650 . + . ID=id-GGE_0751-4;Dbxref=InterPro:IPR008254;Note=ProfileScan:PS50902~flavodoxin_like~flavodoxin/nitric oxide synthase;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21242 21272 . + . ID=id-GGE_0751-5;Dbxref=InterPro:IPR001094;Note=FPrintScan:PR00369~flavodoxin~flavodoxin;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21245 21629 . + . ID=id-GGE_0751-6;Dbxref=InterPro:IPR008254,PFAM:PF00258;Note=flavodoxin_1~flavodoxin/nitric oxide synthase;gbkey=misc_feature;gene=mioC;locus_tag=GGE_0751 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21263 21473 . - . ID=id-AFQR01000015.1:21263..21473;Dbxref=InterPro:IPR001094;Note=FPrintScan:PR00369~flavodoxin~flavodoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21266 21380 . - . ID=id-AFQR01000015.1:21266..21380;Dbxref=InterPro:IPR001094;Note=FPrintScan:PR00369~flavodoxin~flavodoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 21667 22101 . + . ID=gene-GGE_0752;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=GGE_0752 GCA_000222085.2|AFQR01000015.1 Genbank CDS 21667 22101 . + 0 ID=cds-EGT82354.1;Parent=gene-GGE_0752;Dbxref=GeneID:166217555,InterPro:IPR003732,InterPro:IPR023509,PFAM:PF02580,TIGRFAM:TIGR00256,NCBI_GP:EGT82354.1;Name=EGT82354.1;Ontology_term=GO:0019478,GO:0005737,GO:0016788;gbkey=CDS;gene=dtd;go_component=cytoplasm|0005737||;go_function=hydrolase activity acting on ester bonds|0016788||;go_process=D-amino acid catabolic process|0019478||;locus_tag=GGE_0752;product=D-tyrosyl-tRNATyr deacylase;protein_id=EGT82354.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21667 22099 . + . ID=id-GGE_0752;Dbxref=InterPro:IPR003732,InterPro:IPR023509,TIGRFAM:TIGR00256;Note=specific~superfamily~superfamily:SSF69500~dtd-like~d-tyr trnatyr deacylase-like domain~tigr00256: d-tyrosyl-trna(tyr) deacylase~d-tyrosyl-trna(tyr) deacylase~HAMAP:MF_00518~tyr_deacylase_dtd~d-tyrosyl-trna(tyr) deacylase%3B label: Dtyr_deacylase;gbkey=misc_feature;gene=dtd;locus_tag=GGE_0752 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21667 22096 . + . ID=id-GGE_0752-2;Dbxref=InterPro:IPR003732,InterPro:IPR023509;Note=HMMPanther:PTHR10472:SF4~d-tyrosyl-trna(tyr) deacylase~HMMPanther:PTHR10472~d-tyrosyl-trna(tyr) deacylase~d-tyrosyl-trna(tyr) deacylase~Gene3D:3.50.80.10~d-tyr trnatyr deacylase-like domain;gbkey=misc_feature;gene=dtd;locus_tag=GGE_0752 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21676 22090 . + . ID=id-GGE_0752-3;Dbxref=InterPro:IPR003732,PFAM:PF02580;Note=tyr_deacylase~d-tyrosyl-trna(tyr) deacylase;gbkey=misc_feature;gene=dtd;locus_tag=GGE_0752 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21998 22007 . + . ID=id-GGE_0752-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dtd;locus_tag=GGE_0752 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 21706 21739 . - . ID=id-AFQR01000015.1:21706..21739;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22600 22609 . - . ID=id-AFQR01000015.1:22600..22609;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 22624 23100 . - . ID=gene-GGE_0753;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank CDS 22624 23100 . - 0 ID=cds-EGT82355.1;Parent=gene-GGE_0753;Dbxref=GeneID:1176081,InterPro:IPR003526,InterPro:IPR020555,InterPro:IPR023423,PFAM:PF02542,TIGRFAM:TIGR00151,NCBI_GP:EGT82355.1;Name=EGT82355.1;Ontology_term=GO:0016114,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase activity|0008685||;go_process=terpenoid biosynthetic process|0016114||;locus_tag=GGE_0753;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=EGT82355.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22624 23095 . - . ID=id-GGE_0753;Dbxref=InterPro:IPR023423;Note=Gene3D:3.30.1330.50~ipsf-like superfamily;gbkey=misc_feature;gene=ispF;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22630 23092 . - . ID=id-GGE_0753-2;Dbxref=InterPro:IPR003526,PFAM:PF02542;Note=ygbb~2-c-methyl-d-erythritol 2%2C4-cyclodiphosphate synthase~HAMAP:MF_00107~ispf~2-c-methyl-d-erythritol 2%2C4-cyclodiphosphate synthase;gbkey=misc_feature;gene=ispF;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22630 23089 . - . ID=id-GGE_0753-3;Dbxref=InterPro:IPR023423;Note=superfamily:SSF69765~ipsf-like~ipsf-like superfamily;gbkey=misc_feature;gene=ispF;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22633 23089 . - . ID=id-GGE_0753-4;Dbxref=InterPro:IPR003526,TIGRFAM:TIGR00151;Note=ispf: 2c-methyl-d-erythritol 2%2C4-cyclodiphos~2-c-methyl-d-erythritol 2%2C4-cyclodiphosphate synthase;gbkey=misc_feature;gene=ispF;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22633 23083 . - . ID=id-GGE_0753-5;Note=specific~superfamily%3B label: MECDP_synthase;gbkey=misc_feature;gene=ispF;locus_tag=GGE_0753 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 22672 22732 . + . ID=id-AFQR01000015.1:22672..22732;Dbxref=InterPro:IPR020555;Note=PatternScan:PS01350~ispf~2-c-methyl-d-erythritol 2%2C4-cyclodiphosphate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 23097 23774 . - . ID=gene-GGE_0754;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank CDS 23097 23774 . - 0 ID=cds-EGT82356.1;Parent=gene-GGE_0754;Dbxref=GeneID:2811032,InterPro:IPR001228,InterPro:IPR018294,PFAM:PF01128,TIGRFAM:TIGR00453,NCBI_GP:EGT82356.1;Name=EGT82356.1;Ontology_term=GO:0008299,GO:0003824;gbkey=CDS;gene=ispD;go_function=catalytic activity|0003824||;go_process=isoprenoid biosynthetic process|0008299||;locus_tag=GGE_0754;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=EGT82356.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23109 23763 . - . ID=id-GGE_0754;Note=HMMPanther:PTHR19136:SF21~subfamily not named~HMMPanther:PTHR19136~family not named;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23109 23757 . - . ID=id-GGE_0754-2;Dbxref=InterPro:IPR001228;Note=HAMAP:MF_00108~ispd~4-diphosphocytidyl-2c-methyl-d-erythritol synthase;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23109 23754 . - . ID=id-GGE_0754-3;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23109 23751 . - . ID=id-GGE_0754-4;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23112 23751 . - . ID=id-GGE_0754-5;Dbxref=InterPro:IPR001228,PFAM:PF01128;Note=ispd~4-diphosphocytidyl-2c-methyl-d-erythritol synthase;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23112 23733 . - . ID=id-GGE_0754-6;Note=specific~superfamily%3B label: CDP-ME_synthetase;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23115 23742 . - . ID=id-GGE_0754-7;Dbxref=InterPro:IPR001228,TIGRFAM:TIGR00453;Note=ispd: 2-c-methyl-d-erythritol 4-phosphate cy~4-diphosphocytidyl-2c-methyl-d-erythritol synthase;gbkey=misc_feature;gene=ispD;locus_tag=GGE_0754 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23121 23391 . + . ID=id-AFQR01000015.1:23121..23391;Dbxref=InterPro:IPR018294;Note=PatternScan:PS01295~ispd~4-diphosphocytidyl-2c-methyl-d-erythritol synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 23774 24052 . - . ID=gene-GGE_0755;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank CDS 23774 24052 . - 0 ID=cds-EGT82357.1;Parent=gene-GGE_0755;Dbxref=InterPro:IPR007060,InterPro:IPR023081,PFAM:PF04977,NCBI_GP:EGT82357.1;Name=EGT82357.1;Ontology_term=GO:0007049;gbkey=CDS;gene=ftsB;go_process=cell cycle|0007049||;locus_tag=GGE_0755;product=Cell division protein ftsB;protein_id=EGT82357.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23774 24050 . - . ID=id-GGE_0755;Note=superfamily%3B label: DivIC superfamily;gbkey=misc_feature;gene=ftsB;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23774 23987 . - . ID=id-GGE_0755-2;Dbxref=InterPro:IPR023081;Note=HAMAP:MF_00599~ftsb~cell division protein ftsb;gbkey=misc_feature;gene=ftsB;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23783 23813 . - . ID=id-GGE_0755-3;Note=seg;gbkey=misc_feature;gene=ftsB;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23789 23843 . - . ID=id-GGE_0755-4;Note=transmembrane_regions;gbkey=misc_feature;gene=ftsB;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23807 24011 . - . ID=id-GGE_0755-5;Dbxref=InterPro:IPR007060,PFAM:PF04977;Note=divic~septum formation initiator;gbkey=misc_feature;gene=ftsB;locus_tag=GGE_0755 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 23861 23882 . + . ID=id-AFQR01000015.1:23861..23882;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24125 24134 . + . ID=id-AFQR01000015.1:24125..24134;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 24283 25107 . + . ID=gene-GGE_0756;Name=hel;gbkey=Gene;gene=hel;gene_biotype=protein_coding;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank CDS 24283 25107 . + 0 ID=cds-EGT82358.1;Parent=gene-GGE_0756;Dbxref=GeneID:1170200,InterPro:IPR005519,InterPro:IPR006423,InterPro:IPR023214,PFAM:PF03767,PIR:PIRSF019271,TIGRFAM:TIGR01533,NCBI_GP:EGT82358.1;Name=EGT82358.1;Ontology_term=GO:0003993;gbkey=CDS;gene=hel;go_function=acid phosphatase activity|0003993||;locus_tag=GGE_0756;product=Lipoprotein E;protein_id=EGT82358.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24283 25105 . + . ID=id-GGE_0756;Dbxref=InterPro:IPR006423,PIR:PIRSF019271;Note=superfamily~acid phosphatase%2C class c~5-nucleotidase lipoprotein e(p4)%3B label: HAD_like superfamily;gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24283 25096 . + . ID=id-GGE_0756-2;Dbxref=InterPro:IPR006423,TIGRFAM:TIGR01533;Note=lipo_e_p4: 5'-nucleotidase%2C lipoprotein e(p~5-nucleotidase lipoprotein e(p4);gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24283 24346 . + . ID=id-GGE_0756-3;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24310 24316 . + . ID=id-GGE_0756-4;Note=seg;gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24322 24979 . + . ID=id-GGE_0756-5;Dbxref=InterPro:IPR005519,PFAM:PF03767;Note=acid_phosphat_b~acid phosphatase (class b);gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24421 24886 . + . ID=id-GGE_0756-6;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24448 24883 . + . ID=id-GGE_0756-7;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;gene=hel;locus_tag=GGE_0756 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 24322 24496 . - . ID=id-AFQR01000015.1:24322..24496;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 25285 25968 . + . ID=gene-GGE_0757;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank CDS 25285 25968 . + 0 ID=cds-EGT82359.1;Parent=gene-GGE_0757;Dbxref=GeneID:1175289,InterPro:IPR000748,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,PFAM:PF00849,TIGRFAM:TIGR00093,NCBI_GP:EGT82359.1;Name=EGT82359.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0016866,GO:0009982;gbkey=CDS;gene=rluE;go_function=RNA binding|0003723||,intramolecular transferase activity|0016866||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_0757;product=Ribosomal large subunit pseudouridine synthase E;protein_id=EGT82359.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25294 25912 . + . ID=id-GGE_0757;Note=multi-dom%3B label: PRK11394;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25327 25336 . + . ID=id-GGE_0757-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25351 25903 . + . ID=id-GGE_0757-3;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25396 25846 . + . ID=id-GGE_0757-4;Note=HMMPanther:PTHR21600~family not named;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25405 25783 . + . ID=id-GGE_0757-5;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25405 25720 . + . ID=id-GGE_0757-6;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25417 25801 . + . ID=id-GGE_0757-7;Dbxref=InterPro:IPR000748,TIGRFAM:TIGR00093;Note=tigr00093: pseudouridine synthase~pseudouridine synthase%2C rsua/rlub/e/f;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25698 25707 . + . ID=id-GGE_0757-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rluE;locus_tag=GGE_0757 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25330 25510 . - . ID=id-AFQR01000015.1:25330..25510;Dbxref=InterPro:IPR018496;Note=PatternScan:PS01149~psi_rsu~pseudouridine synthase%2C rsua and rlub/e/f%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 25345 25354 . - . ID=id-AFQR01000015.1:25345..25354;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 26032 27294 . - . ID=gene-GGE_0758;Name=GGE_0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank CDS 26032 27294 . - 0 ID=cds-EGT82360.1;Parent=gene-GGE_0758;Dbxref=GeneID:325576964,InterPro:IPR003695,PFAM:PF02541,NCBI_GP:EGT82360.1;Name=EGT82360.1;Note=ZP_08147535;gbkey=CDS;locus_tag=GGE_0758;product=exopolyphosphatase;protein_id=EGT82360.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26032 26701 . - . ID=id-GGE_0758;Dbxref=InterPro:IPR003695,PFAM:PF02541;Note=ppx-gppa~ppx/gppa phosphatase;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26032 26695 . - . ID=id-GGE_0758-2;Note=superfamily%3B label: exo_poly_only superfamily;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26032 26179 . - . ID=id-GGE_0758-3;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26032 26170 . - . ID=id-GGE_0758-4;Note=Gene3D:3.30.420.40;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26173 26566 . - . ID=id-GGE_0758-5;Note=Gene3D:3.30.420.150;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26185 26563 . - . ID=id-GGE_0758-6;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26965 26974 . - . ID=id-GGE_0758-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0758 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26152 26161 . + . ID=id-AFQR01000015.1:26152..26161;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 26590 26716 . + . ID=id-AFQR01000015.1:26590..26716;Note=superfamily:SSF109604~hd-domain/pdease-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 27261 27560 . - . ID=gene-GGE_0759;Name=GGE_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0759 GCA_000222085.2|AFQR01000015.1 Genbank CDS 27261 27560 . - 0 ID=cds-EGT82361.1;Parent=gene-GGE_0759;Dbxref=InterPro:IPR003695,PFAM:PF02541,NCBI_GP:EGT82361.1;Name=EGT82361.1;Note=Hypothetical ppx/GppA phosphatase;gbkey=CDS;locus_tag=GGE_0759;product=putative ppx/GppA phosphatase;protein_id=EGT82361.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27282 27501 . - . ID=id-GGE_0759;Note=Gene3D:3.30.420.40;gbkey=misc_feature;locus_tag=GGE_0759 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27300 27483 . - . ID=id-GGE_0759-2;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;locus_tag=GGE_0759 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27309 27471 . - . ID=id-GGE_0759-3;Note=superfamily%3B label: exo_poly_only superfamily;gbkey=misc_feature;locus_tag=GGE_0759 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27351 27432 . - . ID=id-GGE_0759-4;Dbxref=InterPro:IPR003695,PFAM:PF02541;Note=ppx-gppa~ppx/gppa phosphatase;gbkey=misc_feature;locus_tag=GGE_0759 GCA_000222085.2|AFQR01000015.1 Genbank gene 27568 31464 . - . ID=gene-GGE_0760;Name=GGE_0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0760 GCA_000222085.2|AFQR01000015.1 Genbank CDS 27568 31464 . - 0 ID=cds-EGT82362.1;Parent=gene-GGE_0760;Dbxref=InterPro:IPR007452,PFAM:PF04357,NCBI_GP:EGT82362.1;Name=EGT82362.1;Note=HI_0696;gbkey=CDS;locus_tag=GGE_0760;product=hypothetical protein;protein_id=EGT82362.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27610 31423 . - . ID=id-GGE_0760;Note=multi-dom%3B label: COG2911;gbkey=misc_feature;locus_tag=GGE_0760 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 30922 30931 . - . ID=id-GGE_0760-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0760 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27625 28597 . + . ID=id-AFQR01000015.1:27625..28597;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27637 27649 . + . ID=id-AFQR01000015.1:27637..27649;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27664 31135 . + . ID=id-AFQR01000015.1:27664..31135;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 27994 29890 . + . ID=id-AFQR01000015.1:27994..29890;Dbxref=InterPro:IPR007452,PFAM:PF04357;Note=duf490~protein of unknown function duf490;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 28369 29878 . + . ID=id-AFQR01000015.1:28369..29878;Note=superfamily%3B label: DUF490 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 28612 30421 . + . ID=id-AFQR01000015.1:28612..30421;Note=superfamily%3B label: DUF490 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 28615 30418 . + . ID=id-AFQR01000015.1:28615..30418;Dbxref=InterPro:IPR007452,PFAM:PF04357;Note=duf490~protein of unknown function duf490;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 29386 29395 . + . ID=id-AFQR01000015.1:29386..29395;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 31474 33210 . - . ID=gene-GGE_0761;Name=GGE_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0761 GCA_000222085.2|AFQR01000015.1 Genbank CDS 31474 33210 . - 0 ID=cds-EGT82363.1;Parent=gene-GGE_0761;Dbxref=GeneID:1176923,InterPro:IPR000184,PFAM:PF01103,NCBI_GP:EGT82363.1;Name=EGT82363.1;Note=HI_0698;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_0761;product=putative bacterial surface antigen D15;protein_id=EGT82363.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 31474 33208 . - . ID=id-GGE_0761;Note=multi-dom%3B label: COG0729;gbkey=misc_feature;locus_tag=GGE_0761 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 31600 33085 . - . ID=id-GGE_0761-2;Note=HMMPanther:PTHR12815:SF6~subfamily not named~HMMPanther:PTHR12815~family not named;gbkey=misc_feature;locus_tag=GGE_0761 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 32338 32344 . + . ID=id-AFQR01000015.1:32338..32344;Dbxref=InterPro:IPR000184,PFAM:PF01103;Note=superfamily~bac_surface_ag~bacterial surface antigen (d15)%3B label: Bac_surface_Ag superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33176 33185 . + . ID=id-AFQR01000015.1:33176..33185;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33331 33340 . + . ID=id-AFQR01000015.1:33331..33340;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 33363 34067 . - . ID=gene-GGE_0762;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank CDS 33363 34067 . - 0 ID=cds-EGT82364.1;Parent=gene-GGE_0762;Dbxref=InterPro:IPR001179,PFAM:PF00254,NCBI_GP:EGT82364.1;Name=EGT82364.1;Ontology_term=GO:0006457;gbkey=CDS;gene=slyD;go_process=protein folding|0006457||;locus_tag=GGE_0762;product=FKBP-type peptidyl-prolyl cis-trans isomerase slyD;protein_id=EGT82364.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33441 33981 . - . ID=id-GGE_0762;Note=HMMPanther:PTHR24647:SF31~subfamily not named~HMMPanther:PTHR24647~family not named;gbkey=misc_feature;gene=slyD;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33450 33807 . - . ID=id-GGE_0762-2;Note=superfamily%3B label: FKBP_C superfamily;gbkey=misc_feature;gene=slyD;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33453 33783 . - . ID=id-GGE_0762-3;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature;gene=slyD;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33456 33768 . - . ID=id-GGE_0762-4;Dbxref=InterPro:IPR001179,PFAM:PF00254;Note=fkbp_c~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature;gene=slyD;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33465 33633 . - . ID=id-GGE_0762-5;Dbxref=InterPro:IPR001179;Note=ProfileScan:PS50059~fkbp_ppiase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature;gene=slyD;locus_tag=GGE_0762 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33435 33810 . + . ID=id-AFQR01000015.1:33435..33810;Note=Gene3D:3.10.50.40;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 33537 33894 . + . ID=id-AFQR01000015.1:33537..33894;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 34039 34761 . - . ID=gene-GGE_0763;Name=GGE_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank CDS 34039 34761 . - 0 ID=cds-EGT82365.1;Parent=gene-GGE_0763;Dbxref=GeneID:301155386,InterPro:IPR007497,PFAM:PF04402,NCBI_GP:EGT82365.1;Name=EGT82365.1;Note=CBW14852;gbkey=CDS;locus_tag=GGE_0763;product=Hypothetical protein;protein_id=EGT82365.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34045 34099 . - . ID=id-GGE_0763;Note=seg;gbkey=misc_feature;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34114 34678 . - . ID=id-GGE_0763-2;Note=superfamily%3B label: SIMPL superfamily;gbkey=misc_feature;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34141 34651 . - . ID=id-GGE_0763-3;Dbxref=InterPro:IPR007497,PFAM:PF04402;Note=simpl~protein of unknown function duf541;gbkey=misc_feature;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34507 34516 . - . ID=id-GGE_0763-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34678 34687 . - . ID=id-GGE_0763-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0763 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34087 34639 . + . ID=id-AFQR01000015.1:34087..34639;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 34816 35238 . - . ID=gene-GGE_0764;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank CDS 34816 35238 . - 0 ID=cds-EGT82366.1;Parent=gene-GGE_0764;Dbxref=InterPro:IPR009671,InterPro:IPR016716,PFAM:PF06877,PIR:PIRSF018193,NCBI_GP:EGT82366.1;Name=EGT82366.1;gbkey=CDS;gene=rraB;locus_tag=GGE_0764;product=Regulator of ribonuclease activity B;protein_id=EGT82366.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34816 35236 . - . ID=id-GGE_0764;Dbxref=InterPro:IPR016716,PIR:PIRSF018193;Note=uncharacterised conserved protein%2C ucp018193 type~uncharacterised conserved protein ucp018193;gbkey=misc_feature;gene=rraB;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34816 35167 . - . ID=id-GGE_0764-2;Note=superfamily%3B label: DUF1260 superfamily;gbkey=misc_feature;gene=rraB;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34822 35176 . - . ID=id-GGE_0764-3;Dbxref=InterPro:IPR009671;Note=Gene3D:3.30.70.970~domain of unknown function duf1260;gbkey=misc_feature;gene=rraB;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34828 35173 . - . ID=id-GGE_0764-4;Dbxref=InterPro:IPR009671;Note=superfamily:SSF89946~hypothetical protein vc0424~domain of unknown function duf1260;gbkey=misc_feature;gene=rraB;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34840 35125 . - . ID=id-GGE_0764-5;Dbxref=InterPro:IPR009671,PFAM:PF06877;Note=duf1260~domain of unknown function duf1260;gbkey=misc_feature;gene=rraB;locus_tag=GGE_0764 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 34873 35170 . + . ID=id-AFQR01000015.1:34873..35170;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35261 35270 . + . ID=id-AFQR01000015.1:35261..35270;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 35347 36366 . + . ID=gene-GGE_0765;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank CDS 35347 36366 . + 0 ID=cds-EGT82367.1;Parent=gene-GGE_0765;Dbxref=GeneID:189036626,InterPro:IPR001656,InterPro:IPR011760,InterPro:IPR020103,InterPro:IPR020119,PFAM:PF01142,TIGRFAM:TIGR00094,NCBI_GP:EGT82367.1;Name=EGT82367.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_0765;product=tRNA pseudouridine synthase D;protein_id=EGT82367.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35347 36364 . + . ID=id-GGE_0765;Dbxref=InterPro:IPR001656,TIGRFAM:TIGR00094;Note=trna_trud_broad: trna pseudouridine s~pseudouridine synthase%2C trud;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35347 36358 . + . ID=id-GGE_0765-2;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35347 36352 . + . ID=id-GGE_0765-3;Note=multi-dom%3B label: truD;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35362 36349 . + . ID=id-GGE_0765-4;Dbxref=InterPro:IPR001656;Note=HAMAP:MF_01082~trud~pseudouridine synthase%2C trud;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35377 36319 . + . ID=id-GGE_0765-5;Dbxref=InterPro:IPR001656,PFAM:PF01142;Note=trud~pseudouridine synthase%2C trud;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35395 36301 . + . ID=id-GGE_0765-6;Dbxref=InterPro:IPR001656;Note=HMMPanther:PTHR13326~family not named~pseudouridine synthase%2C trud;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35401 36004 . + . ID=id-GGE_0765-7;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35812 35818 . + . ID=id-GGE_0765-8;Dbxref=InterPro:IPR011760;Note=ProfileScan:PS50984~trud~pseudouridine synthase%2C trud%2C insertion domain;gbkey=misc_feature;gene=truD;locus_tag=GGE_0765 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35389 35578 . - . ID=id-AFQR01000015.1:35389..35578;Dbxref=InterPro:IPR020119;Note=PatternScan:PS01268~upf0024~pseudouridine synthase trud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35394 35403 . - . ID=id-AFQR01000015.1:35394..35403;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 35551 36148 . - . ID=id-AFQR01000015.1:35551..36148;Note=superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 36376 37116 . + . ID=gene-GGE_0766;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank CDS 36376 37116 . + 0 ID=cds-EGT82368.1;Parent=gene-GGE_0766;Dbxref=GeneID:166200085,InterPro:IPR002828,InterPro:IPR004344,PFAM:PF01975,TIGRFAM:TIGR00087,NCBI_GP:EGT82368.1;Name=EGT82368.1;Ontology_term=GO:0006464,GO:0016787,GO:0004835;gbkey=CDS;gene=surE;go_function=hydrolase activity|0016787||,tubulin-tyrosine ligase activity|0004835||;go_process=protein modification process|0006464||;locus_tag=GGE_0766;product=putative nucleosidase-like protein;protein_id=EGT82368.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36376 37114 . + . ID=id-GGE_0766;Dbxref=InterPro:IPR002828;Note=HAMAP:MF_00060~sure~survival protein sure-like phosphatase/nucleotidase;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36376 37111 . + . ID=id-GGE_0766-2;Dbxref=InterPro:IPR002828;Note=superfamily:SSF64167~sure-like~survival protein sure-like phosphatase/nucleotidase~Gene3D:3.40.1210.10~survival protein sure-like phosphatase/nucleotidase;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36376 37108 . + . ID=id-GGE_0766-3;Note=superfamily%3B label: SurE superfamily;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36376 37069 . + . ID=id-GGE_0766-4;Dbxref=InterPro:IPR002828,TIGRFAM:TIGR00087;Note=sure: 5'/3'-nucleotidase sure~survival protein sure-like phosphatase/nucleotidase;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36376 36916 . + . ID=id-GGE_0766-5;Dbxref=InterPro:IPR002828,PFAM:PF01975;Note=sure~survival protein sure-like phosphatase/nucleotidase;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 36526 36565 . + . ID=id-GGE_0766-6;Dbxref=InterPro:IPR004344;Note=HMMPanther:PTHR12241:SF7~tubulin tyrosine ligase-related~HMMPanther:PTHR12241~family not named~tubulin-tyrosine ligase;gbkey=misc_feature;gene=surE;locus_tag=GGE_0766 GCA_000222085.2|AFQR01000015.1 Genbank gene 37146 37724 . + . ID=gene-GGE_0767;Name=GGE_0767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0767 GCA_000222085.2|AFQR01000015.1 Genbank CDS 37146 37724 . + 0 ID=cds-EGT82369.1;Parent=gene-GGE_0767;Dbxref=GeneID:1175291,InterPro:IPR015414,PFAM:PF09335,NCBI_GP:EGT82369.1;Name=EGT82369.1;Note=HI_0703;gbkey=CDS;locus_tag=GGE_0767;product=Hypothetical protein;protein_id=EGT82369.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37155 37635 . + . ID=id-GGE_0767;Note=superfamily%3B label: SNARE_assoc superfamily;gbkey=misc_feature;locus_tag=GGE_0767 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37206 37215 . + . ID=id-GGE_0767-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0767 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37299 37308 . + . ID=id-GGE_0767-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0767 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37311 37446 . + . ID=id-GGE_0767-4;Dbxref=InterPro:IPR015414,PFAM:PF09335;Note=snare_assoc~snare associated golgi protein;gbkey=misc_feature;locus_tag=GGE_0767 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37200 37665 . - . ID=id-AFQR01000015.1:37200..37665;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37200 37332 . - . ID=id-AFQR01000015.1:37200..37332;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37215 37539 . - . ID=id-AFQR01000015.1:37215..37539;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37215 37443 . - . ID=id-AFQR01000015.1:37215..37443;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37215 37317 . - . ID=id-AFQR01000015.1:37215..37317;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 37734 37919 . + . ID=gene-GGE_0768;Name=GGE_0768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0768 GCA_000222085.2|AFQR01000015.1 Genbank CDS 37734 37919 . + 0 ID=cds-EGT82370.1;Parent=gene-GGE_0768;Dbxref=NCBI_GP:EGT82370.1;Name=EGT82370.1;Note=HI_0704;gbkey=CDS;locus_tag=GGE_0768;product=putative lipoprotein;protein_id=EGT82370.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37734 37785 . + . ID=id-GGE_0768;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0768 GCA_000222085.2|AFQR01000015.1 Genbank gene 37943 39250 . + . ID=gene-GGE_0769;Name=GGE_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0769 GCA_000222085.2|AFQR01000015.1 Genbank CDS 37943 39250 . + 0 ID=cds-EGT82371.1;Parent=gene-GGE_0769;Dbxref=GeneID:145637593,InterPro:IPR011055,InterPro:IPR016047,InterPro:IPR018392,PFAM:PF01476,PFAM:PF01551,NCBI_GP:EGT82371.1;Name=EGT82371.1;Note=ZP_01793249;Ontology_term=GO:0016998;gbkey=CDS;go_process=cell wall macromolecule catabolic process|0016998||;locus_tag=GGE_0769;product=lipoprotein;protein_id=EGT82371.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37943 37997 . + . ID=id-GGE_0769;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0769 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 37961 37976 . + . ID=id-GGE_0769-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0769 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38411 38774 . + . ID=id-GGE_0769-3;Dbxref=InterPro:IPR011055;Note=superfamily:SSF51261~protein~protein;gbkey=misc_feature;locus_tag=GGE_0769 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38420 38774 . + . ID=id-GGE_0769-4;Note=HMMPanther:PTHR21666:SF7~m23/m37 peptidase family member~HMMPanther:PTHR21666~family not named;gbkey=misc_feature;locus_tag=GGE_0769 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38018 38753 . - . ID=id-AFQR01000015.1:38018..38753;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38045 38564 . - . ID=id-AFQR01000015.1:38045..38564;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38063 38186 . - . ID=id-AFQR01000015.1:38063..38186;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38075 38423 . - . ID=id-AFQR01000015.1:38075..38423;Dbxref=InterPro:IPR018392,PFAM:PF01476;Note=lysm~peptidoglycan-binding lysin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38078 38420 . - . ID=id-AFQR01000015.1:38078..38420;Note=specific~superfamily%3B label: LysM;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38078 38417 . - . ID=id-AFQR01000015.1:38078..38417;Note=Gene3D:3.10.350.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38225 38948 . - . ID=id-AFQR01000015.1:38225..38948;Dbxref=InterPro:IPR016047,PFAM:PF01551;Note=peptidase_m23~peptidase m23;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38231 38942 . - . ID=id-AFQR01000015.1:38231..38942;Note=superfamily%3B label: Peptidase_M23 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 38315 38873 . - . ID=id-AFQR01000015.1:38315..38873;Note=Gene3D:2.70.70.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 39386 41971 . + . ID=gene-GGE_0770;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank CDS 39386 41971 . + 0 ID=cds-EGT82372.1;Parent=gene-GGE_0770;Dbxref=GeneID:1171081,InterPro:IPR000432,InterPro:IPR005748,InterPro:IPR007695,InterPro:IPR007696,InterPro:IPR007860,InterPro:IPR007861,InterPro:IPR016151,PFAM:PF00488,PFAM:PF01624,PFAM:PF05188,PFAM:PF05190,PFAM:PF05192,TIGRFAM:TIGR01070,NCBI_GP:EGT82372.1;Name=EGT82372.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||,mismatched DNA binding|0030983||;go_process=mismatch repair|0006298||;locus_tag=GGE_0770;product=DNA mismatch repair protein mutS;protein_id=EGT82372.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39392 39752 . + . ID=id-GGE_0770;Dbxref=InterPro:IPR016151;Note=Gene3D:3.40.1170.10~dna mismatch repair protein muts;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39392 39731 . + . ID=id-GGE_0770-2;Dbxref=InterPro:IPR016151;Note=superfamily:SSF55271~dna repair protein muts%2C domain i~dna mismatch repair protein muts;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39395 41960 . + . ID=id-GGE_0770-3;Note=multi-dom%3B label: PRK05399;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39395 41891 . + . ID=id-GGE_0770-4;Note=HMMPanther:PTHR11361:SF34~dna mismatch repair protein muts~HMMPanther:PTHR11361~family not named;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39416 41933 . + . ID=id-GGE_0770-5;Dbxref=InterPro:IPR005748,TIGRFAM:TIGR01070;Note=muts1: dna mismatch repair protein muts~dna mismatch repair protein muts%2C type 1;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39416 41915 . + . ID=id-GGE_0770-6;Dbxref=InterPro:IPR005748;Note=HAMAP:MF_00096~muts~dna mismatch repair protein muts%2C type 1;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39419 39725 . + . ID=id-GGE_0770-7;Note=superfamily%3B label: MutS_I superfamily;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39419 39722 . + . ID=id-GGE_0770-8;Dbxref=InterPro:IPR007695,PFAM:PF01624;Note=muts_i~dna mismatch repair protein muts-like;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39737 39845 . + . ID=id-GGE_0770-9;Dbxref=InterPro:IPR007860;Note=superfamily:SSF53150~dna repair protein muts%2C domain ii~dna mismatch repair protein muts%2C connector;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39779 39785 . + . ID=id-GGE_0770-10;Dbxref=InterPro:IPR007860;Note=Gene3D:3.30.420.110~dna mismatch repair protein muts%2C connector;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40178 40292 . + . ID=id-GGE_0770-11;Note=superfamily%3B label: MutS_III superfamily;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40181 40289 . + . ID=id-GGE_0770-12;Dbxref=InterPro:IPR007696,PFAM:PF05192;Note=muts_iii~dna mismatch repair protein muts%2C core;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40196 40283 . + . ID=id-GGE_0770-13;Dbxref=InterPro:IPR007696;Note=superfamily:SSF48334~dna repair protein muts%2C domain iii~dna mismatch repair protein muts%2C core;gbkey=misc_feature;gene=mutS;locus_tag=GGE_0770 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39419 39512 . - . ID=id-AFQR01000015.1:39419..39512;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39428 41009 . - . ID=id-AFQR01000015.1:39428..41009;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39437 41456 . - . ID=id-AFQR01000015.1:39437..41456;Dbxref=InterPro:IPR000432;Note=PatternScan:PS00486~dna_mismatch_repair_2~dna mismatch repair protein muts domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39452 40910 . - . ID=id-AFQR01000015.1:39452..40910;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39653 40676 . - . ID=id-AFQR01000015.1:39653..40676;Dbxref=InterPro:IPR007861,PFAM:PF05190;Note=muts_iv~dna mismatch repair protein muts%2C clamp;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39764 39779 . - . ID=id-AFQR01000015.1:39764..39779;Dbxref=InterPro:IPR007860,PFAM:PF05188;Note=superfamily~muts_ii~dna mismatch repair protein muts%2C connector%3B label: MutS_II superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 39830 40187 . - . ID=id-AFQR01000015.1:39830..40187;Note=Gene3D:1.10.1420.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40031 41129 . - . ID=id-AFQR01000015.1:40031..41129;Note=specific~superfamily%3B label: ABC_MutS1;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40082 41093 . - . ID=id-AFQR01000015.1:40082..41093;Dbxref=InterPro:IPR000432,PFAM:PF00488;Note=muts_v~dna mismatch repair protein muts domain~Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40088 41093 . - . ID=id-AFQR01000015.1:40088..41093;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 40561 40570 . - . ID=id-AFQR01000015.1:40561..40570;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 41980 41989 . + . ID=id-AFQR01000015.1:41980..41989;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 43610 44842 . - . ID=gene-GGE_0771;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank CDS 43610 44842 . - 0 ID=cds-EGT82373.1;Parent=gene-GGE_0771;Dbxref=GeneID:1173427,InterPro:IPR002912,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR010771,InterPro:IPR016040,PFAM:PF00389,PFAM:PF01842,PFAM:PF02826,NCBI_GP:EGT82373.1;Name=EGT82373.1;Ontology_term=GO:0008152,GO:0009276,GO:0016021,GO:0051287,GO:0016597,GO:0005488,GO:0003824,GO:0048037,GO:0016616;gbkey=CDS;gene=serA;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=NAD or NADH binding|0051287||,amino acid binding|0016597||,binding|0005488||,catalytic activity|0003824||,cofactor binding|0048037||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||;go_process=metabolic process|0008152||;locus_tag=GGE_0771;product=D-3-phosphoglycerate dehydrogenase;protein_id=EGT82373.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43610 44831 . - . ID=id-GGE_0771;Note=HMMPanther:PTHR10996:SF18~d-3-phosphoglycerate dehydrogenase~HMMPanther:PTHR10996~2-hydroxyacid dehydrogenase-related;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43616 44837 . - . ID=id-GGE_0771-2;Note=multi-dom%3B label: PRK11790;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43634 44009 . - . ID=id-GGE_0771-3;Note=superfamily:SSF52283~formate/glycerate dehydrogenase catalytic domain-like;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43646 43946 . - . ID=id-GGE_0771-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43658 44546 . - . ID=id-GGE_0771-5;Dbxref=InterPro:IPR006139,PFAM:PF00389;Note=2-hacid_dh~d-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43937 44174 . - . ID=id-GGE_0771-6;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43964 44144 . - . ID=id-GGE_0771-7;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43967 44141 . - . ID=id-GGE_0771-8;Dbxref=InterPro:IPR006140,PFAM:PF02826;Note=2-hacid_dh_c~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43982 44135 . - . ID=id-GGE_0771-9;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=serA;locus_tag=GGE_0771 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43661 44300 . + . ID=id-AFQR01000015.1:43661..44300;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00671~d_2_hydroxyacid_dh_3~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43679 44213 . + . ID=id-AFQR01000015.1:43679..44213;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00670~d_2_hydroxyacid_dh_2~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43694 44075 . + . ID=id-AFQR01000015.1:43694..44075;Dbxref=InterPro:IPR006140;Note=PatternScan:PS00065~d_2_hydroxyacid_dh_1~d-isomer specific 2-hydroxyacid dehydrogenase%2C nad-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43703 44501 . + . ID=id-AFQR01000015.1:43703..44501;Note=superfamily:SSF52283~formate/glycerate dehydrogenase catalytic domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43781 44645 . + . ID=id-AFQR01000015.1:43781..44645;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43817 44633 . + . ID=id-AFQR01000015.1:43817..44633;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43853 44597 . + . ID=id-AFQR01000015.1:43853..44597;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43856 44597 . + . ID=id-AFQR01000015.1:43856..44597;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 43979 44336 . + . ID=id-AFQR01000015.1:43979..44336;Dbxref=InterPro:IPR010771;Note=BlastProDom:PD147088~q32al0_shidy_q32al0~intracellular growth attenuator igaa;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 44872 45531 . - . ID=gene-GGE_0772;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank CDS 44872 45531 . - 0 ID=cds-EGT82374.1;Parent=gene-GGE_0772;Dbxref=GeneID:1173141,InterPro:IPR004788,InterPro:IPR020672,PFAM:PF06026,TIGRFAM:TIGR00021,NCBI_GP:EGT82374.1;Name=EGT82374.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||;go_process=pentose-phosphate shunt non-oxidative branch|0009052||;locus_tag=GGE_0772;product=Ribose-5-phosphate isomerase A;protein_id=EGT82374.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44872 45529 . - . ID=id-GGE_0772;Dbxref=InterPro:IPR004788;Note=HMMPanther:PTHR11934~family not named~ribose 5-phosphate isomerase%2C type a;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44872 45319 . - . ID=id-GGE_0772-2;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44872 45286 . - . ID=id-GGE_0772-3;Note=Gene3D:3.40.50.1360;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44881 45520 . - . ID=id-GGE_0772-4;Dbxref=InterPro:IPR020672;Note=HAMAP:MF_00170~rib_5p_isom_a~ribose-5-phosphate isomerase%2C type a%2C subgroup;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44890 45505 . - . ID=id-GGE_0772-5;Dbxref=InterPro:IPR004788,TIGRFAM:TIGR00021;Note=rpia: ribose 5-phosphate isomerase a~ribose 5-phosphate isomerase%2C type a;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 44890 45490 . - . ID=id-GGE_0772-6;Note=specific~superfamily%3B label: RPI_A;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45019 45373 . - . ID=id-GGE_0772-7;Dbxref=InterPro:IPR004788,PFAM:PF06026;Note=rib_5-p_isom_a~ribose 5-phosphate isomerase%2C type a;gbkey=misc_feature;gene=rpiA;locus_tag=GGE_0772 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45049 45289 . + . ID=id-AFQR01000015.1:45049..45289;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45088 45253 . + . ID=id-AFQR01000015.1:45088..45253;Note=superfamily:SSF75445~d-ribose-5-phosphate isomerase (rpia)%2C lid domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 45639 46790 . - . ID=gene-GGE_0773;Name=GGE_0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank CDS 45639 46790 . - 0 ID=cds-EGT82375.1;Parent=gene-GGE_0773;Dbxref=GeneID:1170234,InterPro:IPR004559,InterPro:IPR007197,InterPro:IPR010723,InterPro:IPR023404,PFAM:PF04055,PFAM:PF06969,TIGRFAM:TIGR00539,NCBI_GP:EGT82375.1;Name=EGT82375.1;Note=HI_0463;Ontology_term=GO:0055114,GO:0006779,GO:0005737,GO:0003824,GO:0004109,GO:0051536;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,coproporphyrinogen oxidase activity|0004109||,iron-sulfur cluster binding|0051536||;go_process=oxidation-reduction process|0055114||,porphyrin biosynthetic process|0006779||;locus_tag=GGE_0773;product=Oxygen-independent coproporphyrinogen-III oxidase-like protein;protein_id=EGT82375.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45639 46782 . - . ID=id-GGE_0773;Note=HMMPanther:PTHR13932~family not named;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45639 46746 . - . ID=id-GGE_0773-2;Note=multi-dom%3B label: PRK05660;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45654 46767 . - . ID=id-GGE_0773-3;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45660 46737 . - . ID=id-GGE_0773-4;Dbxref=InterPro:IPR004559,TIGRFAM:TIGR00539;Note=hemn_rel: putative oxygen-independent coprop~putative oxygen-independent coproporphyrinogen iii oxidase;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45660 46347 . - . ID=id-GGE_0773-5;Dbxref=InterPro:IPR023404;Note=Gene3D:3.80.30.20~radical sam%2C alpha/beta horseshoe;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45672 46152 . - . ID=id-GGE_0773-6;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45684 46257 . - . ID=id-GGE_0773-7;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45765 45774 . - . ID=id-GGE_0773-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46332 46341 . - . ID=id-GGE_0773-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0773 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45672 46749 . + . ID=id-AFQR01000015.1:45672..46749;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45978 46407 . + . ID=id-AFQR01000015.1:45978..46407;Note=superfamily%3B label: HemN_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 45981 46407 . + . ID=id-AFQR01000015.1:45981..46407;Dbxref=InterPro:IPR010723,PFAM:PF06969;Note=hemn_c~hemn;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 46925 49339 . - . ID=gene-GGE_0774;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank CDS 46925 49339 . - 0 ID=cds-EGT82376.1;Parent=gene-GGE_0774;Dbxref=GeneID:1170813,InterPro:IPR001984,InterPro:IPR003111,InterPro:IPR003959,InterPro:IPR004815,InterPro:IPR008268,InterPro:IPR008269,InterPro:IPR015947,InterPro:IPR020568,PFAM:PF00004,PFAM:PF02190,PFAM:PF05362,TIGRFAM:TIGR00763,NCBI_GP:EGT82376.1;Name=EGT82376.1;Ontology_term=GO:0006508,GO:0005524,GO:0004176,GO:0004252;gbkey=CDS;gene=lon;go_function=ATP binding|0005524||,ATP-dependent peptidase activity|0004176||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0774;product=Lon protease;protein_id=EGT82376.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46925 47534 . - . ID=id-GGE_0774;Note=superfamily%3B label: LON superfamily;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46946 49265 . - . ID=id-GGE_0774-2;Note=HMMPanther:PTHR10046:SF24~peroxisomal lon protease homolog 2~HMMPanther:PTHR10046~atp dependent lon protease family member;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46946 47507 . - . ID=id-GGE_0774-3;Dbxref=InterPro:IPR015947;Note=superfamily:SSF88697~pua domain-like~pseudouridine synthase/archaeosine transglycosylase-like;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46952 49250 . - . ID=id-GGE_0774-4;Note=multi-dom%3B label: PRK10787;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46952 47498 . - . ID=id-GGE_0774-5;Dbxref=InterPro:IPR003111,PFAM:PF02190;Note=lon~peptidase s16%2C lon n-terminal;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46955 49211 . - . ID=id-GGE_0774-6;Dbxref=InterPro:IPR004815,TIGRFAM:TIGR00763;Note=lon: atp-dependent protease la~peptidase s16%2C atp-dependent protease la;gbkey=misc_feature;gene=lon;locus_tag=GGE_0774 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46952 48953 . + . ID=id-AFQR01000015.1:46952..48953;Dbxref=InterPro:IPR008268;Note=PatternScan:PS01046~lon_ser~peptidase s16%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46976 48710 . + . ID=id-AFQR01000015.1:46976..48710;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46982 49103 . + . ID=id-AFQR01000015.1:46982..49103;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46985 49034 . + . ID=id-AFQR01000015.1:46985..49034;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46985 48944 . + . ID=id-AFQR01000015.1:46985..48944;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 46985 47993 . + . ID=id-AFQR01000015.1:46985..47993;Dbxref=InterPro:IPR001984;Note=FPrintScan:PR00830~endolaptase~peptidase s16%2C lon protease;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47177 48428 . + . ID=id-AFQR01000015.1:47177..48428;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47339 47981 . + . ID=id-AFQR01000015.1:47339..47981;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47417 47900 . + . ID=id-AFQR01000015.1:47417..47900;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47468 48710 . + . ID=id-AFQR01000015.1:47468..48710;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47501 47852 . + . ID=id-AFQR01000015.1:47501..47852;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47537 48632 . + . ID=id-AFQR01000015.1:47537..48632;Dbxref=InterPro:IPR008269,PFAM:PF05362;Note=superfamily~lon_c~peptidase s16%2C lon c-terminal%3B label: Lon_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 47786 47831 . + . ID=id-AFQR01000015.1:47786..47831;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 49529 50404 . + . ID=gene-GGE_0775;Name=GGE_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0775 GCA_000222085.2|AFQR01000015.1 Genbank CDS 49529 50404 . + 0 ID=cds-EGT82377.1;Parent=gene-GGE_0775;Dbxref=GeneID:2833484,InterPro:IPR007488,PFAM:PF04393,NCBI_GP:EGT82377.1;Name=EGT82377.1;Note=HI_0461;gbkey=CDS;locus_tag=GGE_0775;product=hypothetical protein;protein_id=EGT82377.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 49529 50399 . + . ID=id-GGE_0775;Note=superfamily%3B label: DUF535 superfamily;gbkey=misc_feature;locus_tag=GGE_0775 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 49577 50354 . + . ID=id-GGE_0775-2;Dbxref=InterPro:IPR007488,PFAM:PF04393;Note=duf535~protein of unknown function duf535;gbkey=misc_feature;locus_tag=GGE_0775 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50409 50418 . + . ID=id-AFQR01000015.1:50409..50418;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 50452 51243 . - . ID=gene-GGE_0776;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=GGE_0776 GCA_000222085.2|AFQR01000015.1 Genbank CDS 50452 51243 . - 0 ID=cds-EGT82378.1;Parent=gene-GGE_0776;Dbxref=GeneID:1170882,InterPro:IPR004518,InterPro:IPR011551,PFAM:PF03819,TIGRFAM:TIGR00444,NCBI_GP:EGT82378.1;Name=EGT82378.1;gbkey=CDS;gene=mazG;locus_tag=GGE_0776;product=Nucleoside triphosphate pyrophosphohydrolase;protein_id=EGT82378.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50452 50776 . - . ID=id-GGE_0776;Note=superfamily:SSF101386~all-alpha ntp pyrophosphatases;gbkey=misc_feature;gene=mazG;locus_tag=GGE_0776 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50485 51199 . - . ID=id-GGE_0776-2;Dbxref=InterPro:IPR011551,TIGRFAM:TIGR00444;Note=multi-dom~mazg: mazg family protein~ntp pyrophosphohydrolase mazg%2C bacterial%3B label: mazG;gbkey=misc_feature;gene=mazG;locus_tag=GGE_0776 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50536 50674 . - . ID=id-GGE_0776-3;Dbxref=InterPro:IPR004518,PFAM:PF03819;Note=superfamily~mazg~ntp pyrophosphohydrolase mazg%2C putative catalytic core%3B label: MazG superfamily;gbkey=misc_feature;gene=mazG;locus_tag=GGE_0776 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50539 50956 . + . ID=id-AFQR01000015.1:50539..50956;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50626 50965 . + . ID=id-AFQR01000015.1:50626..50965;Dbxref=InterPro:IPR004518,PFAM:PF03819;Note=mazg~ntp pyrophosphohydrolase mazg%2C putative catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 50764 50863 . + . ID=id-AFQR01000015.1:50764..50863;Note=superfamily:SSF101386~all-alpha ntp pyrophosphatases;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 51375 51914 . + . ID=gene-GGE_0777;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank CDS 51375 51914 . + 0 ID=cds-EGT82379.1;Parent=gene-GGE_0777;Dbxref=GeneID:166216678,InterPro:IPR000836,InterPro:IPR023050,PFAM:PF00156,NCBI_GP:EGT82379.1;Name=EGT82379.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||;locus_tag=GGE_0777;product=putative pyrimidine regulatory protein;protein_id=EGT82379.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51375 51903 . + . ID=id-GGE_0777;Note=superfamily%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51375 51900 . + . ID=id-GGE_0777-2;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51381 51906 . + . ID=id-GGE_0777-3;Dbxref=InterPro:IPR023050;Note=HAMAP:MF_01219~pyrr~hypothetical pyrimidine regulatory protein;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51381 51885 . + . ID=id-GGE_0777-4;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51384 51771 . + . ID=id-GGE_0777-5;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51414 51849 . + . ID=id-GGE_0777-6;Note=HMMPanther:PTHR11608~family not named;gbkey=misc_feature;gene=pyrR;locus_tag=GGE_0777 GCA_000222085.2|AFQR01000015.1 Genbank gene 51990 52925 . + . ID=gene-GGE_0778;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank CDS 51990 52925 . + 0 ID=cds-EGT82380.1;Parent=gene-GGE_0778;Dbxref=InterPro:IPR000297,InterPro:IPR008880,InterPro:IPR015391,InterPro:IPR023058,PFAM:PF00639,PFAM:PF09312,NCBI_GP:EGT82380.1;Name=EGT82380.1;Ontology_term=GO:0006457,GO:0015031,GO:0016853;gbkey=CDS;gene=surA;go_function=isomerase activity|0016853||;go_process=protein folding|0006457||,protein transport|0015031||;locus_tag=GGE_0778;product=Chaperone surA;protein_id=EGT82380.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 51990 52908 . + . ID=id-GGE_0778;Note=HMMPanther:PTHR10657:SF0~peptidyl-prolyl cis-trans isomerase~HMMPanther:PTHR10657~peptidyl-prolyl cis-trans isomerase;gbkey=misc_feature;gene=surA;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52017 52899 . + . ID=id-GGE_0778-2;Note=multi-dom%3B label: SurA;gbkey=misc_feature;gene=surA;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52068 52506 . + . ID=id-GGE_0778-3;Dbxref=InterPro:IPR008880;Note=superfamily:SSF109998~triger factor/sura peptide-binding domain-like~trigger factor%2C bacterial;gbkey=misc_feature;gene=surA;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52074 52293 . + . ID=id-GGE_0778-4;Note=superfamily%3B label: SurA_N superfamily;gbkey=misc_feature;gene=surA;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52152 52215 . + . ID=id-GGE_0778-5;Dbxref=InterPro:IPR015391,PFAM:PF09312;Note=sura_n~sura n-terminal;gbkey=misc_feature;gene=surA;locus_tag=GGE_0778 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52056 52602 . - . ID=id-AFQR01000015.1:52056..52602;Dbxref=InterPro:IPR023058;Note=PatternScan:PS01096~ppic_ppiase_1~peptidyl-prolyl cis-trans isomerase%2C ppic-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52269 52506 . - . ID=id-AFQR01000015.1:52269..52506;Dbxref=InterPro:IPR000297,PFAM:PF00639;Note=rotamase~peptidyl-prolyl cis-trans isomerase%2C ppic-type;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52272 52506 . - . ID=id-AFQR01000015.1:52272..52506;Note=superfamily%3B label: Rotamase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52293 52485 . - . ID=id-AFQR01000015.1:52293..52485;Dbxref=InterPro:IPR000297;Note=ProfileScan:PS50198~ppic_ppiase_2~peptidyl-prolyl cis-trans isomerase%2C ppic-type;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52314 52476 . - . ID=id-AFQR01000015.1:52314..52476;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52374 52470 . - . ID=id-AFQR01000015.1:52374..52470;Note=Gene3D:3.10.50.40;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 52965 54038 . + . ID=gene-GGE_0779;Name=GGE_0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0779 GCA_000222085.2|AFQR01000015.1 Genbank CDS 52965 54038 . + 0 ID=cds-EGT82381.1;Parent=gene-GGE_0779;Dbxref=GeneID:1175641,InterPro:IPR003770,PFAM:PF02618,TIGRFAM:TIGR00247,NCBI_GP:EGT82381.1;Name=EGT82381.1;Note=HI_0457;gbkey=CDS;locus_tag=GGE_0779;product=UPF0755 protein;protein_id=EGT82381.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 52989 54015 . + . ID=id-GGE_0779;Dbxref=InterPro:IPR003770,TIGRFAM:TIGR00247;Note=tigr00247: conserved hypothetical protein%2C~uncharacterised protein family upf0755;gbkey=misc_feature;locus_tag=GGE_0779 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 53010 53025 . + . ID=id-GGE_0779-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0779 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 53121 53850 . + . ID=id-GGE_0779-3;Dbxref=InterPro:IPR003770,PFAM:PF02618;Note=multi-dom~yceg~uncharacterised protein family upf0755%3B label: YceG;gbkey=misc_feature;locus_tag=GGE_0779 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 53241 53721 . + . ID=id-GGE_0779-4;Note=specific~superfamily%3B label: yceG_like;gbkey=misc_feature;locus_tag=GGE_0779 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 53001 53010 . - . ID=id-AFQR01000015.1:53001..53010;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 53010 53196 . - . ID=id-AFQR01000015.1:53010..53196;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 54028 54687 . + . ID=gene-GGE_0780;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank CDS 54028 54687 . + 0 ID=cds-EGT82382.1;Parent=gene-GGE_0780;Dbxref=GeneID:254808295,InterPro:IPR018094,InterPro:IPR018095,PFAM:PF02223,TIGRFAM:TIGR00041,NCBI_GP:EGT82382.1;Name=EGT82382.1;Ontology_term=GO:0006233,GO:0005524,GO:0004798;gbkey=CDS;gene=tmk;go_function=ATP binding|0005524||,thymidylate kinase activity|0004798||;go_process=dTDP biosynthetic process|0006233||;locus_tag=GGE_0780;product=Thymidylate kinase;protein_id=EGT82382.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54028 54673 . + . ID=id-GGE_0780;Dbxref=InterPro:IPR018094;Note=HMMPanther:PTHR10344~thymidylate kinase~thymidylate kinase;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54058 54646 . + . ID=id-GGE_0780-2;Note=multi-dom~Gene3D:3.40.50.300%3B label: tmk;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54058 54640 . + . ID=id-GGE_0780-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54058 54619 . + . ID=id-GGE_0780-4;Dbxref=InterPro:IPR018094,TIGRFAM:TIGR00041;Note=dtmp_kinase: thymidylate kinase~thymidylate kinase;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54067 54634 . + . ID=id-GGE_0780-5;Dbxref=InterPro:IPR018094;Note=HAMAP:MF_00165~thymidylate_kinase~thymidylate kinase;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54067 54625 . + . ID=id-GGE_0780-6;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54079 54598 . + . ID=id-GGE_0780-7;Dbxref=InterPro:IPR018094,PFAM:PF02223;Note=thymidylate_kin~thymidylate kinase;gbkey=misc_feature;gene=tmk;locus_tag=GGE_0780 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54067 54337 . - . ID=id-AFQR01000015.1:54067..54337;Dbxref=InterPro:IPR018095;Note=PatternScan:PS01331~thymidylate_kinase~thymidylate kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54094 54604 . - . ID=id-AFQR01000015.1:54094..54604;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 54684 55667 . + . ID=gene-GGE_0781;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank CDS 54684 55667 . + 0 ID=cds-EGT82383.1;Parent=gene-GGE_0781;Dbxref=GeneID:2506369,InterPro:IPR004622,InterPro:IPR008921,InterPro:IPR015199,PFAM:PF09115,TIGRFAM:TIGR00678,NCBI_GP:EGT82383.1;Name=EGT82383.1;Ontology_term=GO:0006260,GO:0009360,GO:0008408,GO:0003677,GO:0003887;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||;go_function=3'-5' exonuclease activity|0008408||,DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_0781;product=putative DNA polymerase-like protein;protein_id=EGT82383.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54690 55656 . + . ID=id-GGE_0781;Note=multi-dom%3B label: PRK06871;gbkey=misc_feature;gene=holB;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54699 55290 . + . ID=id-GGE_0781-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=holB;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54702 55161 . + . ID=id-GGE_0781-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=holB;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54720 55251 . + . ID=id-GGE_0781-4;Dbxref=InterPro:IPR004622,TIGRFAM:TIGR00678;Note=holb: dna polymerase iii%2C delta' subunit~dna polymerase iii%2C delta prime subunit;gbkey=misc_feature;gene=holB;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54831 55098 . + . ID=id-GGE_0781-5;Note=HMMPanther:PTHR11669~family not named;gbkey=misc_feature;gene=holB;locus_tag=GGE_0781 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 54876 55014 . - . ID=id-AFQR01000015.1:54876..55014;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55038 55308 . - . ID=id-AFQR01000015.1:55038..55308;Note=Gene3D:1.20.272.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55038 55299 . - . ID=id-AFQR01000015.1:55038..55299;Dbxref=InterPro:IPR015199,PFAM:PF09115;Note=dnapol3-delta_c~dna polymerase iii%2C delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55041 55299 . - . ID=id-AFQR01000015.1:55041..55299;Note=superfamily%3B label: DNApol3-delta_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55044 55305 . - . ID=id-AFQR01000015.1:55044..55305;Dbxref=InterPro:IPR008921;Note=superfamily:SSF48019~dna polymerase iii clamp loader subunits domain~dna polymerase iii%2C clamp loader complex%2C gamma/delta/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 55722 56504 . + . ID=gene-GGE_0782;Name=GGE_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank CDS 55722 56504 . + 0 ID=cds-EGT82384.1;Parent=gene-GGE_0782;Dbxref=GeneID:1175659,InterPro:IPR001130,InterPro:IPR012278,InterPro:IPR015991,InterPro:IPR015992,InterPro:IPR018228,PFAM:PF01026,PIR:PIRSF005902,TIGRFAM:TIGR00010,NCBI_GP:EGT82384.1;Name=EGT82384.1;Note=HI_0454;Ontology_term=GO:0016888;gbkey=CDS;go_function=endodeoxyribonuclease activity producing 5'-phosphomonoesters|0016888||;locus_tag=GGE_0782;product=putative deoxyribonuclease%2C TatD Mg-dependent;protein_id=EGT82384.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55722 56502 . + . ID=id-GGE_0782;Dbxref=InterPro:IPR015992;Note=HMMPanther:PTHR10060:SF0~tatd-related deoxyribonuclease family protein~HMMPanther:PTHR10060~tatd family deoxyribonuclease~deoxyribonuclease%2C tatd;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55722 56499 . + . ID=id-GGE_0782-2;Dbxref=InterPro:IPR012278,PIR:PIRSF005902;Note=mg-dependent dnase%2C tatd type~deoxyribonuclease%2C tatd mg-dependent;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55722 56496 . + . ID=id-GGE_0782-3;Note=superfamily:SSF51556~metallo-dependent hydrolase;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55728 56490 . + . ID=id-GGE_0782-4;Note=Gene3D:3.20.20.140;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55731 56487 . + . ID=id-GGE_0782-5;Dbxref=InterPro:IPR015991,TIGRFAM:TIGR00010;Note=tigr00010: hydrolase%2C tatd family~deoxyribonuclease%2C tatd mg-dependent%2C prokaryote;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55731 56484 . + . ID=id-GGE_0782-6;Note=specific~superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55731 55749 . + . ID=id-GGE_0782-7;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01137~tatd_1~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55734 56484 . + . ID=id-GGE_0782-8;Note=multi-dom%3B label: PRK11449;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55734 56481 . + . ID=id-GGE_0782-9;Dbxref=InterPro:IPR001130,PFAM:PF01026;Note=tatd_dnase~deoxyribonuclease%2C tatd-related;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 56167 56176 . + . ID=id-GGE_0782-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0782 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55755 56103 . - . ID=id-AFQR01000015.1:55755..56103;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01090~tatd_2~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 55773 56298 . - . ID=id-AFQR01000015.1:55773..56298;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01091~tatd_3~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 56531 57055 . + . ID=gene-GGE_0783;Name=GGE_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0783 GCA_000222085.2|AFQR01000015.1 Genbank CDS 56531 57055 . + 0 ID=cds-EGT82385.1;Parent=gene-GGE_0783;Dbxref=GeneID:1175248,InterPro:IPR011088,PFAM:PF07509,NCBI_GP:EGT82385.1;Name=EGT82385.1;Note=HI_0453;gbkey=CDS;locus_tag=GGE_0783;product=hypothetical protein;protein_id=EGT82385.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 56546 57029 . + . ID=id-GGE_0783;Dbxref=InterPro:IPR011088,PFAM:PF07509;Note=superfamily~duf1523~protein of unknown function duf1523%3B label: DUF1523 superfamily;gbkey=misc_feature;locus_tag=GGE_0783 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 56552 56600 . + . ID=id-GGE_0783-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0783 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 56600 56975 . - . ID=id-AFQR01000015.1:56600..56975;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57071 57080 . + . ID=id-AFQR01000015.1:57071..57080;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 57106 58404 . + . ID=gene-GGE_0784;Name=GGE_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank CDS 57106 58404 . + 0 ID=cds-EGT82386.1;Parent=gene-GGE_0784;Dbxref=GeneID:1176922,InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,InterPro:IPR016169,PFAM:PF00571,PFAM:PF01595,PFAM:PF03471,NCBI_GP:EGT82386.1;Name=EGT82386.1;Note=HI_0452;Ontology_term=GO:0055114,GO:0003824,GO:0050660,GO:0005515;gbkey=CDS;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,protein binding|0005515||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0784;product=UPF0053 protein;protein_id=EGT82386.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57133 57685 . + . ID=id-GGE_0784;Dbxref=InterPro:IPR002550,PFAM:PF01595;Note=duf21~domain of unknown function duf21;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57136 58375 . + . ID=id-GGE_0784-2;Note=HMMPanther:PTHR22777~family not named;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57136 57175 . + . ID=id-GGE_0784-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57136 57154 . + . ID=id-GGE_0784-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57184 58327 . + . ID=id-GGE_0784-5;Note=multi-dom%3B label: TlyC;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57184 57583 . + . ID=id-GGE_0784-6;Note=superfamily%3B label: DUF21 superfamily;gbkey=misc_feature;locus_tag=GGE_0784 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57139 57664 . - . ID=id-AFQR01000015.1:57139..57664;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57166 57418 . - . ID=id-AFQR01000015.1:57166..57418;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57175 57514 . - . ID=id-AFQR01000015.1:57175..57514;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57175 57307 . - . ID=id-AFQR01000015.1:57175..57307;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57253 57973 . - . ID=id-AFQR01000015.1:57253..57973;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57259 57766 . - . ID=id-AFQR01000015.1:57259..57766;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57286 57964 . - . ID=id-AFQR01000015.1:57286..57964;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57286 57946 . - . ID=id-AFQR01000015.1:57286..57946;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57286 57766 . - . ID=id-AFQR01000015.1:57286..57766;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57295 57739 . - . ID=id-AFQR01000015.1:57295..57739;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57343 58156 . - . ID=id-AFQR01000015.1:57343..58156;Dbxref=InterPro:IPR005170,PFAM:PF03471;Note=corc_hlyc~transporter-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57346 58153 . - . ID=id-AFQR01000015.1:57346..58153;Note=superfamily%3B label: CorC_HlyC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57352 58141 . - . ID=id-AFQR01000015.1:57352..58141;Dbxref=InterPro:IPR016169;Note=Gene3D:3.30.465.10~co dehydrogenase flavolike protein%2C fad-binding%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57436 57778 . - . ID=id-AFQR01000015.1:57436..57778;Note=specific~superfamily%3B label: CBS_pair superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57529 57718 . - . ID=id-AFQR01000015.1:57529..57718;Note=Gene3D:3.10.580.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 57793 57802 . - . ID=id-AFQR01000015.1:57793..57802;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 58477 59007 . + . ID=gene-GGE_0785;Name=GGE_0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0785 GCA_000222085.2|AFQR01000015.1 Genbank CDS 58477 59007 . + 0 ID=cds-EGT82387.1;Parent=gene-GGE_0785;Dbxref=GeneID:1175246,NCBI_GP:EGT82387.1;Name=EGT82387.1;Note=HI_0449;gbkey=CDS;locus_tag=GGE_0785;product=putative lipoprotein;protein_id=EGT82387.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 58477 58528 . + . ID=id-GGE_0785;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0785 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 58498 58546 . + . ID=id-GGE_0785-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0785 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 58513 58624 . - . ID=id-AFQR01000015.1:58513..58624;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 58516 58576 . - . ID=id-AFQR01000015.1:58516..58576;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 59079 60578 . + . ID=gene-GGE_0786;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank CDS 59079 60578 . + 0 ID=cds-EGT82388.1;Parent=gene-GGE_0786;Dbxref=GeneID:1172712,InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,InterPro:IPR002178,InterPro:IPR005698,InterPro:IPR016152,PFAM:PF00359,PFAM:PF00381,TIGRFAM:TIGR01003,NCBI_GP:EGT82388.1;Name=EGT82388.1;Ontology_term=GO:0009401,GO:0006810,GO:0005351,GO:0005215;gbkey=CDS;gene=fruB;go_function=sugar:hydrogen symporter activity|0005351||,transporter activity|0005215||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,transport|0006810||;locus_tag=GGE_0786;product=Multiphosphoryl transfer protein;protein_id=EGT82388.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59079 60576 . + . ID=id-GGE_0786;Note=multi-dom%3B label: PRK13779;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59079 59502 . + . ID=id-GGE_0786-2;Dbxref=InterPro:IPR016152;Note=superfamily:SSF55804~phoshotransferase/anion transport protein~phosphotransferase/anion transporter;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59085 59502 . + . ID=id-GGE_0786-3;Dbxref=InterPro:IPR002178;Note=ProfileScan:PS51094~pts_eiia_type_2~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59091 59493 . + . ID=id-GGE_0786-4;Dbxref=InterPro:IPR002178;Note=Gene3D:3.40.930.10~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59091 59490 . + . ID=id-GGE_0786-5;Dbxref=InterPro:IPR002178,PFAM:PF00359;Note=pts_eiia_2~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59091 59487 . + . ID=id-GGE_0786-6;Note=specific~superfamily%3B label: PTS_IIA_fru;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59607 59616 . + . ID=id-GGE_0786-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=fruB;locus_tag=GGE_0786 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59103 60345 . - . ID=id-AFQR01000015.1:59103..60345;Dbxref=InterPro:IPR001020;Note=PatternScan:PS00369~pts_hpr_his~phosphotransferase system%2C hpr histidine phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59103 59973 . - . ID=id-AFQR01000015.1:59103..59973;Dbxref=InterPro:IPR001020;Note=PatternScan:PS00369~pts_hpr_his~phosphotransferase system%2C hpr histidine phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59127 60432 . - . ID=id-AFQR01000015.1:59127..60432;Dbxref=InterPro:IPR002114;Note=PatternScan:PS00589~pts_hpr_ser~phosphotransferase system%2C hpr serine phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59127 60057 . - . ID=id-AFQR01000015.1:59127..60057;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59130 59973 . - . ID=id-AFQR01000015.1:59130..59973;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59130 59220 . - . ID=id-AFQR01000015.1:59130..59220;Dbxref=InterPro:IPR002178;Note=PatternScan:PS00372~pts_eiia_type_2_his~phosphotransferase system%2C phosphoenolpyruvate-dependent sugar eiia 2;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59133 60102 . - . ID=id-AFQR01000015.1:59133..60102;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59316 60324 . - . ID=id-AFQR01000015.1:59316..60324;Note=specific~superfamily%3B label: PTS-HPr_like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59319 59949 . - . ID=id-AFQR01000015.1:59319..59949;Note=specific~superfamily%3B label: PTS-HPr_like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59322 59949 . - . ID=id-AFQR01000015.1:59322..59949;Dbxref=InterPro:IPR005698,TIGRFAM:TIGR01003;Note=pts_hpr_family: phosphocarrier%2C hpr f~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59325 59949 . - . ID=id-AFQR01000015.1:59325..59949;Dbxref=InterPro:IPR005698,PFAM:PF00381;Note=pts-hpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59328 60315 . - . ID=id-AFQR01000015.1:59328..60315;Dbxref=InterPro:IPR005698,PFAM:PF00381;Note=pts-hpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59334 60309 . - . ID=id-AFQR01000015.1:59334..60309;Dbxref=InterPro:IPR005698,TIGRFAM:TIGR01003;Note=pts_hpr_family: phosphocarrier%2C hpr f~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59337 59949 . - . ID=id-AFQR01000015.1:59337..59949;Dbxref=InterPro:IPR000032;Note=Gene3D:3.30.1340.10~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59346 60312 . - . ID=id-AFQR01000015.1:59346..60312;Dbxref=InterPro:IPR000032;Note=superfamily:SSF55594~hpr-like~phosphotransferase system%2C phosphocarrier hpr like protein~Gene3D:3.30.1340.10~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59349 60309 . - . ID=id-AFQR01000015.1:59349..60309;Dbxref=InterPro:IPR000032;Note=ProfileScan:PS51350~pts_hpr_dom~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59352 59940 . - . ID=id-AFQR01000015.1:59352..59940;Dbxref=InterPro:IPR000032;Note=superfamily:SSF55594~hpr-like~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59352 59937 . - . ID=id-AFQR01000015.1:59352..59937;Dbxref=InterPro:IPR000032;Note=ProfileScan:PS51350~pts_hpr_dom~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59466 59517 . - . ID=id-AFQR01000015.1:59466..59517;Dbxref=InterPro:IPR016152;Note=superfamily:SSF55804~phoshotransferase/anion transport protein~phosphotransferase/anion transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 59882 59891 . - . ID=id-AFQR01000015.1:59882..59891;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 60580 61521 . + . ID=gene-GGE_0787;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank CDS 60580 61521 . + 0 ID=cds-EGT82389.1;Parent=gene-GGE_0787;Dbxref=GeneID:1170599,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR017583,InterPro:IPR022463,PFAM:PF00294,TIGRFAM:TIGR03168,TIGRFAM:TIGR03828,NCBI_GP:EGT82389.1;Name=EGT82389.1;Ontology_term=GO:0005975,GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0787;product=1-phosphofructokinase;protein_id=EGT82389.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60580 61465 . + . ID=id-GGE_0787;Note=HMMPanther:PTHR10584:SF37~1-phosphofructokinase~HMMPanther:PTHR10584~sugar kinase;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60592 61507 . + . ID=id-GGE_0787-2;Note=multi-dom%3B label: FruK;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60592 61498 . + . ID=id-GGE_0787-3;Dbxref=InterPro:IPR017583,InterPro:IPR022463,TIGRFAM:TIGR03168,TIGRFAM:TIGR03828;Note=1-pfk: hexose kinase%2C 1-phosphofructokinase~tagatose/fructose phosphokinase~pfkb: 1-phosphofructokinase~1-phosphofructokinase;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60592 61390 . + . ID=id-GGE_0787-4;Note=specific~superfamily%3B label: FruK_PfkB_like;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60595 61492 . + . ID=id-GGE_0787-5;Note=Gene3D:3.40.1190.20;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60595 61468 . + . ID=id-GGE_0787-6;Note=superfamily:SSF53613~ribokinase-like;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60613 61429 . + . ID=id-GGE_0787-7;Dbxref=InterPro:IPR011611,PFAM:PF00294;Note=pfkb~carbohydrate/purine kinase;gbkey=misc_feature;gene=fruK;locus_tag=GGE_0787 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60622 61402 . - . ID=id-AFQR01000015.1:60622..61402;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60622 61327 . - . ID=id-AFQR01000015.1:60622..61327;Dbxref=InterPro:IPR002173;Note=PatternScan:PS00584~pfkb_kinases_2~carbohydrate/puine kinase%2C pfkb%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 60655 60694 . - . ID=id-AFQR01000015.1:60655..60694;Dbxref=InterPro:IPR002173;Note=PatternScan:PS00583~pfkb_kinases_1~carbohydrate/puine kinase%2C pfkb%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 61523 63193 . + . ID=gene-GGE_0788;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank CDS 61523 63193 . + 0 ID=cds-EGT82390.1;Parent=gene-GGE_0788;Dbxref=GeneID:1172713,InterPro:IPR003352,InterPro:IPR003353,InterPro:IPR003501,InterPro:IPR006327,InterPro:IPR013011,InterPro:IPR013014,PFAM:PF02302,PFAM:PF02378,TIGRFAM:TIGR00829,TIGRFAM:TIGR01427,NCBI_GP:EGT82390.1;Name=EGT82390.1;Ontology_term=GO:0009401,GO:0016021,GO:0016020,GO:0008982,GO:0005351;gbkey=CDS;gene=fruA;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||,sugar:hydrogen symporter activity|0005351||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||;locus_tag=GGE_0788;product=PTS system fructose-specific EIIBC component;protein_id=EGT82390.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61523 63191 . + . ID=id-GGE_0788;Note=multi-dom%3B label: PRK10712;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61523 61832 . + . ID=id-GGE_0788-2;Note=superfamily%3B label: COG3925 superfamily;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61796 61805 . + . ID=id-GGE_0788-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 62153 62546 . + . ID=id-GGE_0788-4;Dbxref=InterPro:IPR006327,TIGRFAM:TIGR01427;Note=superfamily~pts_iic_fructo: pts system%2C fru family~phosphotransferase system%2C fructose iic component%3B label: PTS_EIIC superfamily;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 62195 62522 . + . ID=id-GGE_0788-5;Dbxref=InterPro:IPR013014;Note=ProfileScan:PS51104~pts_eiic_type_2~phosphotransferase system%2C eiic component%2C type 2;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 62213 62312 . + . ID=id-GGE_0788-6;Dbxref=InterPro:IPR003352,PFAM:PF02378;Note=pts_eiic~phosphotransferase system%2C eiic;gbkey=misc_feature;gene=fruA;locus_tag=GGE_0788 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61577 63119 . - . ID=id-AFQR01000015.1:61577..63119;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61577 61982 . - . ID=id-AFQR01000015.1:61577..61982;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61583 62921 . - . ID=id-AFQR01000015.1:61583..62921;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61583 62450 . - . ID=id-AFQR01000015.1:61583..62450;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62993 . - . ID=id-AFQR01000015.1:61592..62993;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62777 . - . ID=id-AFQR01000015.1:61592..62777;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62672 . - . ID=id-AFQR01000015.1:61592..62672;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62576 . - . ID=id-AFQR01000015.1:61592..62576;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62471 . - . ID=id-AFQR01000015.1:61592..62471;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62333 . - . ID=id-AFQR01000015.1:61592..62333;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61592 62228 . - . ID=id-AFQR01000015.1:61592..62228;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61775 61844 . - . ID=id-AFQR01000015.1:61775..61844;Dbxref=InterPro:IPR003353,TIGRFAM:TIGR00829;Note=fru: pts system%2C fru family%2C iib compo~phosphotransferase system%2C fructose-specific iib subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61781 61847 . - . ID=id-AFQR01000015.1:61781..61847;Dbxref=InterPro:IPR003501,PFAM:PF02302;Note=pts_iib~phosphotransferase system%2C eiib component%2C type 2/3;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61811 61841 . - . ID=id-AFQR01000015.1:61811..61841;Dbxref=InterPro:IPR013011;Note=specific~superfamily~ProfileScan:PS51099~pts_eiib_type_2~phosphotransferase system%2C eiib component%2C type 2%3B label: PTS_IIB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61823 61832 . - . ID=id-AFQR01000015.1:61823..61832;Note=superfamily:SSF52794~pts system%2C lactose/cellobiose specific iib subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 61829 61835 . - . ID=id-AFQR01000015.1:61829..61835;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63194 63203 . - . ID=id-AFQR01000015.1:63194..63203;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 63255 63935 . - . ID=gene-GGE_0789;Name=GGE_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0789 GCA_000222085.2|AFQR01000015.1 Genbank CDS 63255 63935 . - 0 ID=cds-EGT82391.1;Parent=gene-GGE_0789;Dbxref=GeneID:1175304,InterPro:IPR004843,InterPro:IPR017056,PFAM:PF00149,PIR:PIRSF036446,NCBI_GP:EGT82391.1;Name=EGT82391.1;Note=HI_0762;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||;locus_tag=GGE_0789;product=putative phosphoesterase-like protein;protein_id=EGT82391.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63255 63933 . - . ID=id-GGE_0789;Dbxref=InterPro:IPR017056,PIR:PIRSF036446;Note=predicted phosphoesterase%2C hi0762 type~phosphoesterase%2C hi0762%2C predicted;gbkey=misc_feature;locus_tag=GGE_0789 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63261 63912 . - . ID=id-GGE_0789-2;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;locus_tag=GGE_0789 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63261 63819 . - . ID=id-GGE_0789-3;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=multi-dom~metallophos~metallo-dependent phosphatase%3B label: Metallophos;gbkey=misc_feature;locus_tag=GGE_0789 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63261 63537 . - . ID=id-GGE_0789-4;Note=superfamily%3B label: MPP_superfamily superfamily;gbkey=misc_feature;locus_tag=GGE_0789 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63534 63645 . + . ID=id-AFQR01000015.1:63534..63645;Note=Gene3D:3.60.21.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 63932 65044 . - . ID=gene-GGE_0790;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank CDS 63932 65044 . - 0 ID=cds-EGT82392.1;Parent=gene-GGE_0790;Dbxref=GeneID:1171638,InterPro:IPR004821,InterPro:IPR006417,InterPro:IPR014729,InterPro:IPR016429,PIR:PIRSF004776,TIGRFAM:TIGR00125,TIGRFAM:TIGR01526,NCBI_GP:EGT82392.1;Name=EGT82392.1;Ontology_term=GO:0009058,GO:0016481,GO:0019363,GO:0045449,GO:0006810,GO:0003677,GO:0003824,GO:0030528;gbkey=CDS;gene=nadR;go_function=DNA binding|0003677||,catalytic activity|0003824||,transcription regulator activity|0030528||;go_process=biosynthetic process|0009058||,negative regulation of transcription|0016481||,pyridine nucleotide biosynthetic process|0019363||,regulation of transcription|0045449||,transport|0006810||;locus_tag=GGE_0790;product=Nicotinamide-nucleotide adenylyltransferase-like protein;protein_id=EGT82392.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63932 65033 . - . ID=id-GGE_0790;Dbxref=InterPro:IPR016429,PIR:PIRSF004776;Note=bifunctional transcription regulator nadr (nmn adenylytransferase/ribosylnicotinamide kinase)~bifunctional transcriptional regulator nadr;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63950 64421 . - . ID=id-GGE_0790-2;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63953 64931 . - . ID=id-GGE_0790-3;Dbxref=InterPro:IPR006417,TIGRFAM:TIGR01526;Note=multi-dom~nadr_nmn_atrans: nicotinamide-nucleot~nicotinamide-nucleotide adenylyltransferase%3B label: nadR_NMN_Atrans;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63953 64433 . - . ID=id-GGE_0790-4;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63959 64421 . - . ID=id-GGE_0790-5;Note=specific~superfamily%3B label: NMNAT_NadR;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63959 64148 . - . ID=id-GGE_0790-6;Dbxref=InterPro:IPR004821,TIGRFAM:TIGR00125;Note=cyt_tran_rel: cytidyltransferase-rela~cytidyltransferase-related;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 64436 64493 . - . ID=id-GGE_0790-7;Note=superfamily%3B label: NadR superfamily;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 64439 64493 . - . ID=id-GGE_0790-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=nadR;locus_tag=GGE_0790 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 63998 64841 . + . ID=id-AFQR01000015.1:63998..64841;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 64433 64460 . + . ID=id-AFQR01000015.1:64433..64460;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 64604 64613 . + . ID=id-AFQR01000015.1:64604..64613;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65206 65215 . + . ID=id-AFQR01000015.1:65206..65215;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 65416 66063 . + . ID=gene-GGE_0791;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank CDS 65416 66063 . + 0 ID=cds-EGT82393.1;Parent=gene-GGE_0791;Dbxref=GeneID:81336213,InterPro:IPR000422,InterPro:IPR017945,PFAM:PF00926,TIGRFAM:TIGR00506,NCBI_GP:EGT82393.1;Name=EGT82393.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3 4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||;go_process=riboflavin biosynthetic process|0009231||;locus_tag=GGE_0791;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=EGT82393.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65416 66061 . + . ID=id-GGE_0791;Note=superfamily%3B label: DHBP_synthase superfamily;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65416 66055 . + . ID=id-GGE_0791-2;Note=HMMPanther:PTHR21327~family not named;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65434 66043 . + . ID=id-GGE_0791-3;Dbxref=InterPro:IPR017945;Note=superfamily:SSF55821~yrdc/ribb~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65452 66025 . + . ID=id-GGE_0791-4;Dbxref=InterPro:IPR000422;Note=HAMAP:MF_00180~ribb~3%2C4-dihydroxy-2-butanone 4-phosphate synthase%2C ribb;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65455 66010 . + . ID=id-GGE_0791-5;Dbxref=InterPro:IPR000422,TIGRFAM:TIGR00506;Note=ribb: 3%2C4-dihydroxy-2-butanone-4-phosphate s~3%2C4-dihydroxy-2-butanone 4-phosphate synthase%2C ribb;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65461 66013 . + . ID=id-GGE_0791-6;Dbxref=InterPro:IPR017945;Note=Gene3D:3.90.870.10~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 65473 65992 . + . ID=id-GGE_0791-7;Dbxref=InterPro:IPR000422,PFAM:PF00926;Note=dhbp_synthase~3%2C4-dihydroxy-2-butanone 4-phosphate synthase%2C ribb;gbkey=misc_feature;gene=ribB;locus_tag=GGE_0791 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66099 66108 . - . ID=id-AFQR01000015.1:66099..66108;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 66160 66930 . + . ID=gene-GGE_0792;Name=GGE_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0792 GCA_000222085.2|AFQR01000015.1 Genbank CDS 66160 66930 . + 0 ID=cds-EGT82394.1;Parent=gene-GGE_0792;Dbxref=GeneID:229845811,InterPro:IPR002654,PFAM:PF01755,NCBI_GP:EGT82394.1;Name=EGT82394.1;Note=ZP_04465923;Ontology_term=GO:0009103;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_0792;product=lipooligosaccharide biosynthesis protein;protein_id=EGT82394.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66178 66685 . + . ID=id-GGE_0792;Dbxref=InterPro:IPR002654,PFAM:PF01755;Note=glyco_transf_25~glycosyl transferase%2C family 25;gbkey=misc_feature;locus_tag=GGE_0792 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66181 66685 . + . ID=id-GGE_0792-2;Note=specific~superfamily%3B label: Glyco_transf_25;gbkey=misc_feature;locus_tag=GGE_0792 GCA_000222085.2|AFQR01000015.1 Genbank gene 66980 67462 . - . ID=gene-GGE_0793;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank CDS 66980 67462 . - 0 ID=cds-EGT82395.1;Parent=gene-GGE_0793;Dbxref=GeneID:1176303,InterPro:IPR001537,InterPro:IPR016914,PFAM:PF00588,PIR:PIRSF029256,TIGRFAM:TIGR00185,NCBI_GP:EGT82395.1;Name=EGT82395.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:0008168;gbkey=CDS;gene=trmL;go_function=RNA binding|0003723||,RNA methyltransferase activity|0008173||,methyltransferase activity|0008168||;go_process=RNA processing|0006396||;locus_tag=GGE_0793;product=putative methyltransferase-like protein;protein_id=EGT82395.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66980 67448 . - . ID=id-GGE_0793;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66980 67442 . - . ID=id-GGE_0793-2;Dbxref=InterPro:IPR016914,PIR:PIRSF029256,TIGRFAM:TIGR00185;Note=superfamily~rrna_methyl_2: rna methyltransferase%2C t~trna (cytidine/uridine-2'-o-)-methyltransferase~predicted s-adenosyl-l-methionine dependent trna/rrna methyltransferase%2C spou type~trna (cytidine/uridine-2'-o-)-methyltransferase%3B label: SpoU_methylase superfamily;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66980 67439 . - . ID=id-GGE_0793-3;Note=Gene3D:3.40.1280.10;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66980 67433 . - . ID=id-GGE_0793-4;Note=HMMPanther:PTHR12029:SF26~subfamily not named~HMMPanther:PTHR12029~family not named;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66986 67430 . - . ID=id-GGE_0793-5;Dbxref=InterPro:IPR016914;Note=HAMAP:MF_01885~trna_methyltr_trml~trna (cytidine/uridine-2'-o-)-methyltransferase;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 66986 67403 . - . ID=id-GGE_0793-6;Dbxref=InterPro:IPR001537,PFAM:PF00588;Note=spou_methylase~trna/rrna methyltransferase%2C spou;gbkey=misc_feature;gene=trmL;locus_tag=GGE_0793 GCA_000222085.2|AFQR01000015.1 Genbank gene 67473 68054 . - . ID=gene-GGE_0794;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank CDS 67473 68054 . - 0 ID=cds-EGT82396.1;Parent=gene-GGE_0794;Dbxref=GeneID:1176277,InterPro:IPR002052,InterPro:IPR004398,PFAM:PF03602,PIR:PIRSF004553,TIGRFAM:TIGR00095,NCBI_GP:EGT82396.1;Name=EGT82396.1;Ontology_term=GO:0032259,GO:0031167,GO:0008168,GO:0003676;gbkey=CDS;gene=rsmD;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||;go_process=methylation|0032259||,rRNA methylation|0031167||;locus_tag=GGE_0794;product=Ribosomal RNA small subunit methyltransferase D;protein_id=EGT82396.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67485 68043 . - . ID=id-GGE_0794;Dbxref=InterPro:IPR004398,TIGRFAM:TIGR00095;Note=tigr00095: rna methyltransferase%2C rsmd fami~rna methyltransferase%2C rsmd;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67491 68037 . - . ID=id-GGE_0794-2;Dbxref=InterPro:IPR004398,PIR:PIRSF004553;Note=predicted methylase%2C yhhf type~rna methyltransferase%2C rsmd;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67506 68022 . - . ID=id-GGE_0794-3;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67512 68013 . - . ID=id-GGE_0794-4;Dbxref=InterPro:IPR004398,PFAM:PF03602;Note=cons_hypoth95~rna methyltransferase%2C rsmd;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67533 67830 . - . ID=id-GGE_0794-5;Note=HMMPanther:PTHR18895:SF28~subfamily not named~HMMPanther:PTHR18895~family not named;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67590 67860 . - . ID=id-GGE_0794-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67647 67797 . - . ID=id-GGE_0794-7;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;gene=rsmD;locus_tag=GGE_0794 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67494 67860 . + . ID=id-AFQR01000015.1:67494..67860;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67539 67740 . + . ID=id-AFQR01000015.1:67539..67740;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 67676 67685 . + . ID=id-AFQR01000015.1:67676..67685;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 68151 69497 . + . ID=gene-GGE_0795;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank CDS 68151 69497 . + 0 ID=cds-EGT82397.1;Parent=gene-GGE_0795;Dbxref=InterPro:IPR000897,InterPro:IPR004390,InterPro:IPR013822,PFAM:PF00448,PFAM:PF02881,TIGRFAM:TIGR00064,NCBI_GP:EGT82397.1;Name=EGT82397.1;Ontology_term=GO:0006614,GO:0005525;gbkey=CDS;gene=ftsY;go_function=GTP binding|0005525||;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||;locus_tag=GGE_0795;product=Cell division protein ftsY;protein_id=EGT82397.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68157 69477 . + . ID=id-GGE_0795;Note=HMMPanther:PTHR11564:SF6~cell division protein ftsy~HMMPanther:PTHR11564~family not named;gbkey=misc_feature;gene=ftsY;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68208 68208 . + . ID=id-GGE_0795-2;Note=seg;gbkey=misc_feature;gene=ftsY;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68331 68340 . + . ID=id-GGE_0795-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ftsY;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68559 69075 . + . ID=id-GGE_0795-4;Note=multi-dom%3B label: PRK10416;gbkey=misc_feature;gene=ftsY;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68664 68970 . + . ID=id-GGE_0795-5;Dbxref=InterPro:IPR004390,TIGRFAM:TIGR00064;Note=ftsy: signal recognition particle-docking pr~cell division transporter substrate-binding protein ftsy;gbkey=misc_feature;gene=ftsY;locus_tag=GGE_0795 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68184 68676 . - . ID=id-AFQR01000015.1:68184..68676;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68187 68481 . - . ID=id-AFQR01000015.1:68187..68481;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68193 69402 . - . ID=id-AFQR01000015.1:68193..69402;Dbxref=InterPro:IPR000897;Note=PatternScan:PS00300~srp54~signal recognition particle%2C srp54 subunit%2C gtpase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68202 68367 . - . ID=id-AFQR01000015.1:68202..68367;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68217 69171 . - . ID=id-AFQR01000015.1:68217..69171;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68217 68781 . - . ID=id-AFQR01000015.1:68217..68781;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68379 68598 . - . ID=id-AFQR01000015.1:68379..68598;Dbxref=InterPro:IPR013822,PFAM:PF02881;Note=srp54_n~signal recognition particle%2C srp54 subunit%2C helical bundle;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68382 68595 . - . ID=id-AFQR01000015.1:68382..68595;Note=superfamily%3B label: SRP54_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68394 68577 . - . ID=id-AFQR01000015.1:68394..68577;Dbxref=InterPro:IPR013822;Note=superfamily:SSF47364~domain of the srp/srp receptor g-proteins~signal recognition particle%2C srp54 subunit%2C helical bundle;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68424 68553 . - . ID=id-AFQR01000015.1:68424..68553;Dbxref=InterPro:IPR013822;Note=Gene3D:1.20.120.140~signal recognition particle%2C srp54 subunit%2C helical bundle;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68688 68883 . - . ID=id-AFQR01000015.1:68688..68883;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68751 68883 . - . ID=id-AFQR01000015.1:68751..68883;Dbxref=InterPro:IPR000897,PFAM:PF00448;Note=srp54~signal recognition particle%2C srp54 subunit%2C gtpase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68766 68868 . - . ID=id-AFQR01000015.1:68766..68868;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 68772 68871 . - . ID=id-AFQR01000015.1:68772..68871;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 69516 70172 . + . ID=gene-GGE_0796;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank CDS 69516 70172 . + 0 ID=cds-EGT82398.1;Parent=gene-GGE_0796;Dbxref=GeneID:1169752,InterPro:IPR003439,InterPro:IPR005286,InterPro:IPR013505,InterPro:IPR017871,PFAM:PF00005,TIGRFAM:TIGR00960,TIGRFAM:TIGR02673,NCBI_GP:EGT82398.1;Name=EGT82398.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||,ATPase activity|0016887||;go_process=cell division|0051301||;locus_tag=GGE_0796;product=Cell division ATP-binding protein FtsE;protein_id=EGT82398.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69516 70170 . + . ID=id-GGE_0796;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69516 70164 . + . ID=id-GGE_0796-2;Dbxref=InterPro:IPR013505,TIGRFAM:TIGR00960;Note=multi-dom~3a0501s02: type ii (general) secretory path~cell division protein ftse~Gene3D:3.40.50.300%3B label: 3a0501s02;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69516 70161 . + . ID=id-GGE_0796-3;Dbxref=InterPro:IPR005286,TIGRFAM:TIGR02673;Note=ftse: cell division atp-binding protein fts~cell division atp-binding protein ftse;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69522 70167 . + . ID=id-GGE_0796-4;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69522 70161 . + . ID=id-GGE_0796-5;Note=superfamily~HMMPanther:PTHR24220:SF36~subfamily not named~HMMPanther:PTHR24220~family not named%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69645 69888 . + . ID=id-GGE_0796-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=ftsE;locus_tag=GGE_0796 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 69561 69933 . - . ID=id-AFQR01000015.1:69561..69933;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 70182 71114 . + . ID=gene-GGE_0797;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=GGE_0797 GCA_000222085.2|AFQR01000015.1 Genbank CDS 70182 71114 . + 0 ID=cds-EGT82399.1;Parent=gene-GGE_0797;Dbxref=GeneID:1169763,InterPro:IPR003838,InterPro:IPR004513,PFAM:PF02687,TIGRFAM:TIGR00439,NCBI_GP:EGT82399.1;Name=EGT82399.1;Ontology_term=GO:0007049,GO:0016021,GO:0016020;gbkey=CDS;gene=ftsX;go_component=integral to membrane|0016021||,membrane|0016020||;go_process=cell cycle|0007049||;locus_tag=GGE_0797;product=Cell division protein ftsX;protein_id=EGT82399.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70182 71103 . + . ID=id-GGE_0797;Note=superfamily%3B label: FtsX superfamily;gbkey=misc_feature;gene=ftsX;locus_tag=GGE_0797 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70188 71109 . + . ID=id-GGE_0797-2;Dbxref=InterPro:IPR004513,TIGRFAM:TIGR00439;Note=ftsx: putative protein insertion permease ft~abc transporter%2C ftsx cell division permease;gbkey=misc_feature;gene=ftsX;locus_tag=GGE_0797 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70572 70701 . + . ID=id-GGE_0797-3;Dbxref=InterPro:IPR003838,PFAM:PF02687;Note=ftsx~domain of unknown function duf214%2C abc transporter permease;gbkey=misc_feature;gene=ftsX;locus_tag=GGE_0797 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70227 70914 . - . ID=id-AFQR01000015.1:70227..70914;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70227 70782 . - . ID=id-AFQR01000015.1:70227..70782;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70251 71010 . - . ID=id-AFQR01000015.1:70251..71010;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70251 70881 . - . ID=id-AFQR01000015.1:70251..70881;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70251 70710 . - . ID=id-AFQR01000015.1:70251..70710;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70251 70272 . - . ID=id-AFQR01000015.1:70251..70272;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 70694 70703 . - . ID=id-AFQR01000015.1:70694..70703;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71181 71190 . - . ID=id-AFQR01000015.1:71181..71190;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 71385 71747 . + . ID=gene-GGE_0798;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank CDS 71385 71747 . + 0 ID=cds-EGT82400.1;Parent=gene-GGE_0798;Dbxref=InterPro:IPR001848,InterPro:IPR005731,InterPro:IPR018268,PFAM:PF00338,TIGRFAM:TIGR01049,NCBI_GP:EGT82400.1;Name=EGT82400.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsJ;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0798;product=30S ribosomal protein S10;protein_id=EGT82400.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71436 71694 . + . ID=id-GGE_0798;Dbxref=InterPro:IPR001848,InterPro:IPR005731;Note=HMMPanther:PTHR11700:SF2~30s ribosomal protein s10~ribosomal protein s10 subgroup~HMMPanther:PTHR11700~family not named~ribosomal protein s10;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71439 71691 . + . ID=id-GGE_0798-2;Note=superfamily%3B label: Ribosomal_S10 superfamily;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71445 71685 . + . ID=id-GGE_0798-3;Dbxref=InterPro:IPR005731;Note=HAMAP:MF_00508~ribosomal_s10~ribosomal protein s10 subgroup;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71448 71682 . + . ID=id-GGE_0798-4;Dbxref=InterPro:IPR005731,TIGRFAM:TIGR01049;Note=rpsj_bact: ribosomal protein s10~ribosomal protein s10 subgroup;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71451 71679 . + . ID=id-GGE_0798-5;Dbxref=InterPro:IPR001848;Note=superfamily:SSF54999~ribosomal protein s10~ribosomal protein s10;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71451 71673 . + . ID=id-GGE_0798-6;Dbxref=InterPro:IPR001848;Note=Gene3D:3.30.70.600~ribosomal protein s10;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71454 71673 . + . ID=id-GGE_0798-7;Dbxref=InterPro:IPR001848,PFAM:PF00338;Note=ribosomal_s10~ribosomal protein s10;gbkey=misc_feature;gene=rpsJ;locus_tag=GGE_0798 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71427 71451 . - . ID=id-AFQR01000015.1:71427..71451;Dbxref=InterPro:IPR001848;Note=FPrintScan:PR00971~ribosomals10~ribosomal protein s10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71430 71619 . - . ID=id-AFQR01000015.1:71430..71619;Dbxref=InterPro:IPR001848;Note=FPrintScan:PR00971~ribosomals10~ribosomal protein s10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71433 71556 . - . ID=id-AFQR01000015.1:71433..71556;Dbxref=InterPro:IPR001848;Note=FPrintScan:PR00971~ribosomals10~ribosomal protein s10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71433 71523 . - . ID=id-AFQR01000015.1:71433..71523;Dbxref=InterPro:IPR018268;Note=PatternScan:PS00361~ribosomal_s10~ribosomal protein s10%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 71764 72390 . + . ID=gene-GGE_0799;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank CDS 71764 72390 . + 0 ID=cds-EGT82401.1;Parent=gene-GGE_0799;Dbxref=GeneID:1173047,InterPro:IPR000597,InterPro:IPR009000,InterPro:IPR019926,InterPro:IPR019927,PFAM:PF00297,TIGRFAM:TIGR03625,NCBI_GP:EGT82401.1;Name=EGT82401.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplC;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0799;product=50S ribosomal protein L3;protein_id=EGT82401.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71764 72388 . + . ID=id-GGE_0799;Note=superfamily~HMMPanther:PTHR11229~family not named%3B label: Ribosomal_L3 superfamily;gbkey=misc_feature;gene=rplC;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71764 72385 . + . ID=id-GGE_0799-2;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature;gene=rplC;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71773 72367 . + . ID=id-GGE_0799-3;Dbxref=InterPro:IPR019927,TIGRFAM:TIGR03625;Note=l3_bact: 50s ribosomal protein l3~ribosomal protein l3%2C bacterial/organelle-type;gbkey=misc_feature;gene=rplC;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71788 72352 . + . ID=id-GGE_0799-4;Dbxref=InterPro:IPR000597,PFAM:PF00297;Note=ribosomal_l3~ribosomal protein l3;gbkey=misc_feature;gene=rplC;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71992 72004 . + . ID=id-GGE_0799-5;Note=Gene3D:4.10.960.10;gbkey=misc_feature;gene=rplC;locus_tag=GGE_0799 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71836 72064 . - . ID=id-AFQR01000015.1:71836..72064;Dbxref=InterPro:IPR019926;Note=PatternScan:PS00474~ribosomal_l3~ribosomal protein l3%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 71920 72232 . - . ID=id-AFQR01000015.1:71920..72232;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 72406 73008 . + . ID=gene-GGE_0800;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=GGE_0800 GCA_000222085.2|AFQR01000015.1 Genbank CDS 72406 73008 . + 0 ID=cds-EGT82402.1;Parent=gene-GGE_0800;Dbxref=GeneID:1173051,InterPro:IPR002136,InterPro:IPR013005,InterPro:IPR023574,PFAM:PF00573,NCBI_GP:EGT82402.1;Name=EGT82402.1;Ontology_term=GO:0006412,GO:0005840,GO:0003735;gbkey=CDS;gene=rplD;go_component=ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0800;product=50S ribosomal protein L4;protein_id=EGT82402.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 72406 73006 . + . ID=id-GGE_0800;Note=superfamily%3B label: Ribosomal_L4 superfamily;gbkey=misc_feature;gene=rplD;locus_tag=GGE_0800 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 72406 73003 . + . ID=id-GGE_0800-2;Dbxref=InterPro:IPR023574;Note=superfamily:SSF52166~ribosomal protein l4~ribosomal protein l4 domain;gbkey=misc_feature;gene=rplD;locus_tag=GGE_0800 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 72442 72964 . + . ID=id-GGE_0800-3;Dbxref=InterPro:IPR002136,InterPro:IPR013005,PFAM:PF00573;Note=ribosomal_l4~ribosomal protein l4/l1e~HMMPanther:PTHR10746~50s ribosomal protein l4~ribosomal protein l4/l1e%2C bacterial-type;gbkey=misc_feature;gene=rplD;locus_tag=GGE_0800 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 72562 72853 . + . ID=id-GGE_0800-4;Dbxref=InterPro:IPR023574;Note=Gene3D:3.40.1370.10~ribosomal protein l4 domain;gbkey=misc_feature;gene=rplD;locus_tag=GGE_0800 GCA_000222085.2|AFQR01000015.1 Genbank gene 73005 73304 . + . ID=gene-GGE_0801;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank CDS 73005 73304 . + 0 ID=cds-EGT82403.1;Parent=gene-GGE_0801;Dbxref=GeneID:1172997,InterPro:IPR001014,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,PFAM:PF00276,NCBI_GP:EGT82403.1;Name=EGT82403.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003723,GO:0000166,GO:0003735;gbkey=CDS;gene=rplW;go_component=intracellular|0005622||,ribosome|0005840||;go_function=RNA binding|0003723||,nucleotide binding|0000166||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0801;product=50S ribosomal protein L23;protein_id=EGT82403.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73014 73290 . + . ID=id-GGE_0801;Dbxref=InterPro:IPR012678;Note=superfamily:SSF54189~ribosomal proteins s24e%2C l23 and l15e~ribosomal protein l23/l15e;gbkey=misc_feature;gene=rplW;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73026 73275 . + . ID=id-GGE_0801-2;Dbxref=InterPro:IPR012677;Note=Gene3D:3.30.70.330~nucleotide-binding%2C alpha-beta plait;gbkey=misc_feature;gene=rplW;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73026 73272 . + . ID=id-GGE_0801-3;Note=superfamily%3B label: Ribosomal_L23 superfamily;gbkey=misc_feature;gene=rplW;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73029 73272 . + . ID=id-GGE_0801-4;Dbxref=InterPro:IPR013025,PFAM:PF00276;Note=ribosomal_l23~ribosomal protein l25/l23;gbkey=misc_feature;gene=rplW;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73032 73263 . + . ID=id-GGE_0801-5;Note=HMMPanther:PTHR11620~family not named;gbkey=misc_feature;gene=rplW;locus_tag=GGE_0801 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73053 73245 . - . ID=id-AFQR01000015.1:73053..73245;Dbxref=InterPro:IPR001014;Note=PatternScan:PS00050~ribosomal_l23~ribosomal protein l23/l25%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73062 73161 . - . ID=id-AFQR01000015.1:73062..73161;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 73322 74143 . + . ID=gene-GGE_0802;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank CDS 73322 74143 . + 0 ID=cds-EGT82404.1;Parent=gene-GGE_0802;Dbxref=GeneID:1173020,InterPro:IPR002171,InterPro:IPR005880,InterPro:IPR008991,InterPro:IPR012340,InterPro:IPR014722,InterPro:IPR014726,InterPro:IPR016027,InterPro:IPR022666,InterPro:IPR022669,InterPro:IPR022671,PFAM:PF00181,PFAM:PF03947,PIR:PIRSF002158,TIGRFAM:TIGR01171,NCBI_GP:EGT82404.1;Name=EGT82404.1;Ontology_term=GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003723,GO:0003735,GO:0016740;gbkey=CDS;gene=rplB;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||,transferase activity|0016740||;go_process=translation|0006412||;locus_tag=GGE_0802;product=50S ribosomal protein L2;protein_id=EGT82404.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73322 74141 . + . ID=id-GGE_0802;Note=multi-dom%3B label: rplB;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73322 74135 . + . ID=id-GGE_0802-2;Dbxref=InterPro:IPR002171,InterPro:IPR005880;Note=HMMPanther:PTHR13691:SF5~50s ribosomal protein l2~ribosomal protein l2%2C bacterial-type~HMMPanther:PTHR13691~family not named~ribosomal protein l2;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73331 74135 . + . ID=id-GGE_0802-3;Dbxref=InterPro:IPR005880,TIGRFAM:TIGR01171;Note=rplb_bact: ribosomal protein l2~ribosomal protein l2%2C bacterial-type;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73331 74132 . + . ID=id-GGE_0802-4;Dbxref=InterPro:IPR002171,PIR:PIRSF002158;Note=ribosomal protein%2C l2p/l2a/l8e/organellar l2 types~ribosomal protein l2;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73331 73658 . + . ID=id-GGE_0802-5;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73436 73589 . + . ID=id-GGE_0802-6;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73448 73553 . + . ID=id-GGE_0802-7;Note=superfamily%3B label: Ribosomal_L2 superfamily;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73448 73550 . + . ID=id-GGE_0802-8;Dbxref=InterPro:IPR022666,PFAM:PF00181;Note=ribosomal_l2~ribosomal proteins l2%2C rna binding domain;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73694 73703 . + . ID=id-GGE_0802-9;Dbxref=InterPro:IPR022669,PFAM:PF03947;Note=ribosomal_l2_c~ribosomal protein l2;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73694 73700 . + . ID=id-GGE_0802-10;Note=superfamily%3B label: Ribosomal_L2_C superfamily;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73703 73745 . + . ID=id-GGE_0802-11;Dbxref=InterPro:IPR008991;Note=superfamily:SSF50104~translation proteins sh3-like domain~translation protein sh3-like;gbkey=misc_feature;gene=rplB;locus_tag=GGE_0802 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73358 73976 . - . ID=id-AFQR01000015.1:73358..73976;Dbxref=InterPro:IPR022671;Note=PatternScan:PS00467~ribosomal_l2~ribosomal protein l2%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73547 73679 . - . ID=id-AFQR01000015.1:73547..73679;Dbxref=InterPro:IPR014722;Note=Gene3D:2.30.30.30~translation protein sh3-like%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 73550 73910 . - . ID=id-AFQR01000015.1:73550..73910;Dbxref=InterPro:IPR014726;Note=Gene3D:4.10.950.10~ribosomal protein l2%2C domain 3;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 74168 74443 . + . ID=gene-GGE_0803;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=GGE_0803 GCA_000222085.2|AFQR01000015.1 Genbank CDS 74168 74443 . + 0 ID=cds-EGT82405.1;Parent=gene-GGE_0803;Dbxref=InterPro:IPR002222,InterPro:IPR005732,InterPro:IPR020934,InterPro:IPR023575,PFAM:PF00203,PIR:PIRSF002144,TIGRFAM:TIGR01050,NCBI_GP:EGT82405.1;Name=EGT82405.1;Ontology_term=GO:0006412,GO:0005840,GO:0015935,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsS;go_component=ribosome|0005840||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0803;product=30S ribosomal protein S19;protein_id=EGT82405.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74168 74441 . + . ID=id-GGE_0803;Dbxref=InterPro:IPR002222,InterPro:IPR005732,PIR:PIRSF002144,TIGRFAM:TIGR01050;Note=superfamily~rpss_bact: ribosomal protein s19~ribosomal protein s19%2C bacterial-type~ribosomal protein%2C s19p/s19a/s15e/organellar s19 types~ribosomal protein s19/s15~HMMPanther:PTHR11880:SF6~subfamily not named~HMMPanther:PTHR11880~family not named~ribosomal protein s19/s15%3B label: Ribosomal_S19 superfamily;gbkey=misc_feature;gene=rpsS;locus_tag=GGE_0803 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74174 74420 . + . ID=id-GGE_0803-2;Dbxref=InterPro:IPR023575;Note=superfamily:SSF54570~ribosomal protein s19~ribosomal protein s19%2C superfamily;gbkey=misc_feature;gene=rpsS;locus_tag=GGE_0803 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74177 74423 . + . ID=id-GGE_0803-3;Dbxref=InterPro:IPR023575;Note=Gene3D:3.30.860.10~ribosomal protein s19%2C superfamily;gbkey=misc_feature;gene=rpsS;locus_tag=GGE_0803 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74177 74411 . + . ID=id-GGE_0803-4;Dbxref=InterPro:IPR002222,PFAM:PF00203;Note=ribosomal_s19~ribosomal protein s19/s15;gbkey=misc_feature;gene=rpsS;locus_tag=GGE_0803 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74207 74327 . - . ID=id-AFQR01000015.1:74207..74327;Dbxref=InterPro:IPR002222;Note=FPrintScan:PR00975~ribosomals19~ribosomal protein s19/s15;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74216 74363 . - . ID=id-AFQR01000015.1:74216..74363;Dbxref=InterPro:IPR002222;Note=FPrintScan:PR00975~ribosomals19~ribosomal protein s19/s15;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74228 74267 . - . ID=id-AFQR01000015.1:74228..74267;Dbxref=InterPro:IPR002222;Note=FPrintScan:PR00975~ribosomals19~ribosomal protein s19/s15;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74243 74327 . - . ID=id-AFQR01000015.1:74243..74327;Dbxref=InterPro:IPR020934;Note=PatternScan:PS00323~ribosomal_s19~ribosomal protein s19 conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 74455 74787 . + . ID=gene-GGE_0804;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=GGE_0804 GCA_000222085.2|AFQR01000015.1 Genbank CDS 74455 74787 . + 0 ID=cds-EGT82406.1;Parent=gene-GGE_0804;Dbxref=GeneID:1172993,InterPro:IPR001063,InterPro:IPR005727,InterPro:IPR018260,PFAM:PF00237,TIGRFAM:TIGR01044,NCBI_GP:EGT82406.1;Name=EGT82406.1;Ontology_term=GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003735;gbkey=CDS;gene=rplV;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0804;product=50S ribosomal protein L22;protein_id=EGT82406.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74455 74785 . + . ID=id-GGE_0804;Dbxref=InterPro:IPR001063,InterPro:IPR005727;Note=superfamily:SSF54843~ribosomal protein l22~ribosomal protein l22/l17~HMMPanther:PTHR13501~family not named~ribosomal protein l22%2C bacterial-type;gbkey=misc_feature;gene=rplV;locus_tag=GGE_0804 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74455 74782 . + . ID=id-GGE_0804-2;Dbxref=InterPro:IPR001063;Note=Gene3D:3.90.470.10~ribosomal protein l22/l17;gbkey=misc_feature;gene=rplV;locus_tag=GGE_0804 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74470 74767 . + . ID=id-GGE_0804-3;Dbxref=InterPro:IPR001063,PFAM:PF00237;Note=ribosomal_l22~ribosomal protein l22/l17;gbkey=misc_feature;gene=rplV;locus_tag=GGE_0804 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74470 74764 . + . ID=id-GGE_0804-4;Dbxref=InterPro:IPR005727,TIGRFAM:TIGR01044;Note=specific~superfamily~rplv_bact: ribosomal protein l22~ribosomal protein l22%2C bacterial-type%3B label: Ribosomal_L22;gbkey=misc_feature;gene=rplV;locus_tag=GGE_0804 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74488 74578 . - . ID=id-AFQR01000015.1:74488..74578;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74530 74704 . - . ID=id-AFQR01000015.1:74530..74704;Dbxref=InterPro:IPR018260;Note=PatternScan:PS00464~ribosomal_l22~ribosomal protein l22/l17%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 74805 75512 . + . ID=gene-GGE_0805;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank CDS 74805 75512 . + 0 ID=cds-EGT82407.1;Parent=gene-GGE_0805;Dbxref=GeneID:172048056,InterPro:IPR001351,InterPro:IPR004044,InterPro:IPR004088,InterPro:IPR005704,InterPro:IPR008282,InterPro:IPR009019,InterPro:IPR015946,InterPro:IPR018280,PFAM:PF00189,PFAM:PF00417,PFAM:PF07650,TIGRFAM:TIGR01009,NCBI_GP:EGT82407.1;Name=EGT82407.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsC;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0805;product=30S ribosomal protein S3;protein_id=EGT82407.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74805 75510 . + . ID=id-GGE_0805;Note=HMMPanther:PTHR11760:SF10~pthr11760:sf10~HMMPanther:PTHR11760~pthr11760;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74805 75468 . + . ID=id-GGE_0805-2;Note=multi-dom%3B label: rpsC;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74805 75438 . + . ID=id-GGE_0805-3;Dbxref=InterPro:IPR005704,TIGRFAM:TIGR01009;Note=rpsc_bact~ribosomal protein s3%2C bacterial;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74805 74985 . + . ID=id-GGE_0805-4;Dbxref=InterPro:IPR008282,PFAM:PF00417;Note=ribosomal_s3_n~ribosomal protein s3;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74811 75129 . + . ID=id-GGE_0805-5;Note=specific~superfamily%3B label: 30S_S3_KH;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74811 75120 . + . ID=id-GGE_0805-6;Dbxref=InterPro:IPR009019;Note=superfamily:SSF54814~kh_prok~k homology%2C prokaryotic type;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74856 75078 . + . ID=id-GGE_0805-7;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~kh_prok~ky domain-like%2C alpha/beta;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74922 75012 . + . ID=id-GGE_0805-8;Dbxref=InterPro:IPR004044;Note=ProfileScan:PS50823~kh_type_2~k homology%2C type 2;gbkey=misc_feature;gene=rpsC;locus_tag=GGE_0805 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74910 75294 . - . ID=id-AFQR01000015.1:74910..75294;Dbxref=InterPro:IPR018280;Note=PatternScan:PS00548~ribosomal_s3~ribosomal protein s3%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74940 74988 . - . ID=id-AFQR01000015.1:74940..74988;Dbxref=InterPro:IPR004088;Note=ProfileScan:PS50084~kh_type_1~k homology%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 74967 74997 . - . ID=id-AFQR01000015.1:74967..74997;Dbxref=InterPro:IPR004044,PFAM:PF07650;Note=kh_2~k homology%2C type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75057 75162 . - . ID=id-AFQR01000015.1:75057..75162;Dbxref=InterPro:IPR001351,PFAM:PF00189;Note=superfamily~ribosomal_s3_c~ribosomal protein s3%3B label: Ribosomal_S3_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75105 75129 . - . ID=id-AFQR01000015.1:75105..75129;Dbxref=InterPro:IPR001351;Note=Gene3D:3.30.1140.32~ribosomal_s3_c~ribosomal protein s3;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75108 75126 . - . ID=id-AFQR01000015.1:75108..75126;Dbxref=InterPro:IPR001351;Note=superfamily:SSF54821~ribosomal_s3_c~ribosomal protein s3;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 75526 75936 . + . ID=gene-GGE_0806;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank CDS 75526 75936 . + 0 ID=cds-EGT82408.1;Parent=gene-GGE_0806;Dbxref=InterPro:IPR000114,InterPro:IPR016180,InterPro:IPR020798,PFAM:PF00252,TIGRFAM:TIGR01164,NCBI_GP:EGT82408.1;Name=EGT82408.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0019843,GO:0003735;gbkey=CDS;gene=rplP;go_component=intracellular|0005622||,ribosome|0005840||;go_function=rRNA binding|0019843||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0806;product=50S ribosomal protein L16;protein_id=EGT82408.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75526 75934 . + . ID=id-GGE_0806;Dbxref=InterPro:IPR000114;Note=HMMPanther:PTHR12220~family not named~ribosomal protein l16;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75526 75925 . + . ID=id-GGE_0806-2;Dbxref=InterPro:IPR000114;Note=HAMAP:MF_01342~ribosomal_l16~ribosomal protein l16;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75532 75901 . + . ID=id-GGE_0806-3;Dbxref=InterPro:IPR000114,TIGRFAM:TIGR01164;Note=rplp_bact: ribosomal protein l16~ribosomal protein l16;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75535 75919 . + . ID=id-GGE_0806-4;Dbxref=InterPro:IPR016180;Note=superfamily:SSF54686~ribosomal protein l16p/l10e~ribosomal protein l10e/l16;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75538 75913 . + . ID=id-GGE_0806-5;Note=Gene3D:3.90.1170.10;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75538 75910 . + . ID=id-GGE_0806-6;Dbxref=InterPro:IPR016180,PFAM:PF00252;Note=ribosomal_l16~ribosomal protein l10e/l16;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75592 75856 . + . ID=id-GGE_0806-7;Note=specific~superfamily%3B label: Ribosomal_L16_L10e;gbkey=misc_feature;gene=rplP;locus_tag=GGE_0806 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75556 75865 . - . ID=id-AFQR01000015.1:75556..75865;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75562 75769 . - . ID=id-AFQR01000015.1:75562..75769;Dbxref=InterPro:IPR020798;Note=PatternScan:PS00701~ribosomal_l16_2~ribosomal protein l16%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75562 75700 . - . ID=id-AFQR01000015.1:75562..75700;Dbxref=InterPro:IPR020798;Note=PatternScan:PS00586~ribosomal_l16_1~ribosomal protein l16%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75562 75649 . - . ID=id-AFQR01000015.1:75562..75649;Dbxref=InterPro:IPR000114;Note=FPrintScan:PR00060~ribosomall16~ribosomal protein l16;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75565 75595 . - . ID=id-AFQR01000015.1:75565..75595;Dbxref=InterPro:IPR000114;Note=FPrintScan:PR00060~ribosomall16~ribosomal protein l16;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75616 75787 . - . ID=id-AFQR01000015.1:75616..75787;Dbxref=InterPro:IPR000114;Note=FPrintScan:PR00060~ribosomall16~ribosomal protein l16;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75616 75697 . - . ID=id-AFQR01000015.1:75616..75697;Dbxref=InterPro:IPR000114;Note=FPrintScan:PR00060~ribosomall16~ribosomal protein l16;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 75936 76127 . + . ID=gene-GGE_0807;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank CDS 75936 76127 . + 0 ID=cds-EGT82409.1;Parent=gene-GGE_0807;Dbxref=GeneID:1173015,InterPro:IPR001854,InterPro:IPR018254,PFAM:PF00831,TIGRFAM:TIGR00012,NCBI_GP:EGT82409.1;Name=EGT82409.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmC;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0807;product=50S ribosomal protein L29;protein_id=EGT82409.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75936 76125 . + . ID=id-GGE_0807;Dbxref=InterPro:IPR001854;Note=superfamily~superfamily:SSF46561~ribosomal protein l29 (l29p)~ribosomal protein l29%3B label: Ribosomal_L29_HIP superfamily;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75936 76122 . + . ID=id-GGE_0807-2;Note=HMMPanther:PTHR10916~60s ribosomal protein l35/50s ribosomal protein l29;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75936 76116 . + . ID=id-GGE_0807-3;Dbxref=InterPro:IPR001854;Note=Gene3D:1.10.287.310~ribosomal protein l29;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75945 76110 . + . ID=id-GGE_0807-4;Dbxref=InterPro:IPR001854,PFAM:PF00831;Note=ribosomal_l29~ribosomal protein l29;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75951 76104 . + . ID=id-GGE_0807-5;Dbxref=InterPro:IPR001854,TIGRFAM:TIGR00012;Note=l29: ribosomal protein l29~ribosomal protein l29;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75969 75978 . + . ID=id-GGE_0807-6;Note=seg;gbkey=misc_feature;gene=rpmC;locus_tag=GGE_0807 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 75981 76053 . - . ID=id-AFQR01000015.1:75981..76053;Dbxref=InterPro:IPR018254;Note=PatternScan:PS00579~ribosomal_l29~ribosomal protein l29%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 76127 76384 . + . ID=gene-GGE_0808;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank CDS 76127 76384 . + 0 ID=cds-EGT82410.1;Parent=gene-GGE_0808;Dbxref=GeneID:1173213,InterPro:IPR000266,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR019979,InterPro:IPR019984,PFAM:PF00366,TIGRFAM:TIGR03635,NCBI_GP:EGT82410.1;Name=EGT82410.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsQ;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0808;product=30S ribosomal protein S17;protein_id=EGT82410.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76127 76376 . + . ID=id-GGE_0808;Note=superfamily%3B label: Ribosomal_S17 superfamily;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76139 76364 . + . ID=id-GGE_0808-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76142 76343 . + . ID=id-GGE_0808-3;Dbxref=InterPro:IPR019984,TIGRFAM:TIGR03635;Note=s17_bact: 30s ribosomal protein s17~ribosomal protein s17%2C bacterial-type;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76145 76358 . + . ID=id-GGE_0808-4;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76151 76352 . + . ID=id-GGE_0808-5;Dbxref=InterPro:IPR000266;Note=HMMPanther:PTHR10744~40s ribosomal protein s11 family member~ribosomal protein s17;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76157 76334 . + . ID=id-GGE_0808-6;Dbxref=InterPro:IPR000266,PFAM:PF00366;Note=ribosomal_s17~ribosomal protein s17;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76157 76328 . + . ID=id-GGE_0808-7;Dbxref=InterPro:IPR000266;Note=BlastProDom:PD001295~rs17_haein_p44383~ribosomal protein s17;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76199 76199 . + . ID=id-GGE_0808-8;Dbxref=InterPro:IPR000266;Note=FPrintScan:PR00973~ribosomals17~ribosomal protein s17;gbkey=misc_feature;gene=rpsQ;locus_tag=GGE_0808 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76151 76325 . - . ID=id-AFQR01000015.1:76151..76325;Dbxref=InterPro:IPR000266;Note=FPrintScan:PR00973~ribosomals17~ribosomal protein s17;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76160 76295 . - . ID=id-AFQR01000015.1:76160..76295;Dbxref=InterPro:IPR000266;Note=FPrintScan:PR00973~ribosomals17~ribosomal protein s17;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76166 76295 . - . ID=id-AFQR01000015.1:76166..76295;Dbxref=InterPro:IPR019979;Note=PatternScan:PS00056~ribosomal_s17~ribosomal protein s17%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 76962 77136 . - . ID=id-AFQR01000015.1:76962..77136;Note=HMMPanther:PTHR21339~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 77374 77679 . - . ID=gene-GGE_0809;Name=GGE_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0809 GCA_000222085.2|AFQR01000015.1 Genbank CDS 77374 77679 . - 0 ID=cds-EGT82411.1;Parent=gene-GGE_0809;Dbxref=NCBI_GP:EGT82411.1;Name=EGT82411.1;Note=Hypothetical radical SAM enzyme;gbkey=CDS;locus_tag=GGE_0809;product=putative radical SAM enzyme;protein_id=EGT82411.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 77386 77659 . - . ID=id-GGE_0809;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_0809 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 77404 77629 . - . ID=id-GGE_0809-2;Note=multi-dom%3B label: moaA;gbkey=misc_feature;locus_tag=GGE_0809 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 77709 77883 . + . ID=id-AFQR01000015.1:77709..77883;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 78156 78168 . + . ID=id-AFQR01000015.1:78156..78168;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 78692 79063 . + . ID=gene-GGE_0810;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=GGE_0810 GCA_000222085.2|AFQR01000015.1 Genbank CDS 78692 79063 . + 0 ID=cds-EGT82412.1;Parent=gene-GGE_0810;Dbxref=InterPro:IPR000218,InterPro:IPR005745,InterPro:IPR019972,InterPro:IPR023571,PFAM:PF00238,TIGRFAM:TIGR01067,NCBI_GP:EGT82412.1;Name=EGT82412.1;Ontology_term=GO:0006412,GO:0015934,GO:0005840,GO:0003735;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0810;product=50S ribosomal protein L14;protein_id=EGT82412.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 78692 79061 . + . ID=id-GGE_0810;Dbxref=InterPro:IPR000218,InterPro:IPR005745,InterPro:IPR023571,PFAM:PF00238,TIGRFAM:TIGR01067;Note=superfamily~superfamily:SSF50193~ribosomal protein l14~ribosomal protein l14 domain~ribosomal_l14~ribosomal protein l14b/l23e~HMMPanther:PTHR11761~family not named~ribosomal protein l14b/l23e~rpln_bact: ribosomal protein l14~ribosomal protein l14%2C bacterial-type~Gene3D:2.40.150.20~ribosomal protein l14 domain%3B label: Ribosomal_L14 superfamily;gbkey=misc_feature;gene=rplN;locus_tag=GGE_0810 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 78773 78872 . - . ID=id-AFQR01000015.1:78773..78872;Dbxref=InterPro:IPR019972;Note=PatternScan:PS00049~ribosomal_l14~ribosomal protein l14 conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 79074 79385 . + . ID=gene-GGE_0811;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank CDS 79074 79385 . + 0 ID=cds-EGT82413.1;Parent=gene-GGE_0811;Dbxref=GeneID:166222058,InterPro:IPR003256,InterPro:IPR005824,InterPro:IPR005825,InterPro:IPR008991,InterPro:IPR014723,PFAM:PF00467,TIGRFAM:TIGR01079,NCBI_GP:EGT82413.1;Name=EGT82413.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplX;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0811;product=50S ribosomal protein L24;protein_id=EGT82413.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79074 79383 . + . ID=id-GGE_0811;Note=superfamily%3B label: KOW superfamily;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79074 79371 . + . ID=id-GGE_0811-2;Dbxref=InterPro:IPR003256;Note=HMMPanther:PTHR12903~family not named~ribosomal protein l24;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79080 79380 . + . ID=id-GGE_0811-3;Dbxref=InterPro:IPR003256,TIGRFAM:TIGR01079;Note=rplx_bact: ribosomal protein l24~ribosomal protein l24;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79083 79344 . + . ID=id-GGE_0811-4;Dbxref=InterPro:IPR014723;Note=Gene3D:2.30.30.200~ribosomal protein l24%2C sh3-like;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79086 79371 . + . ID=id-GGE_0811-5;Dbxref=InterPro:IPR008991;Note=superfamily:SSF50104~translation proteins sh3-like domain~translation protein sh3-like;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79098 79164 . + . ID=id-GGE_0811-6;Dbxref=InterPro:IPR005824,PFAM:PF00467;Note=kow~kow;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79098 79128 . + . ID=id-GGE_0811-7;Dbxref=InterPro:IPR005825;Note=PatternScan:PS01108~ribosomal_l24~ribosomal protein l24/l26%2C conserved site;gbkey=misc_feature;gene=rplX;locus_tag=GGE_0811 GCA_000222085.2|AFQR01000015.1 Genbank gene 79403 79942 . + . ID=gene-GGE_0812;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank CDS 79403 79942 . + 0 ID=cds-EGT82414.1;Parent=gene-GGE_0812;Dbxref=GeneID:1173053,InterPro:IPR002132,InterPro:IPR020929,InterPro:IPR022803,PFAM:PF00281,PFAM:PF00673,PIR:PIRSF002161,NCBI_GP:EGT82414.1;Name=EGT82414.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplE;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0812;product=50S ribosomal protein L5;protein_id=EGT82414.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79403 79940 . + . ID=id-GGE_0812;Dbxref=InterPro:IPR002132,InterPro:IPR022803,PIR:PIRSF002161;Note=multi-dom~superfamily:SSF55282~ribosomal protein l5~ribosomal protein l5 domain~Gene3D:3.30.1440.10~ribosomal protein l5 domain~ribosomal protein%2C l5p/l5a/l11e/organellar l5 types~ribosomal protein l5%3B label: rplE;gbkey=misc_feature;gene=rplE;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79403 79937 . + . ID=id-GGE_0812-2;Dbxref=InterPro:IPR002132;Note=HMMPanther:PTHR11994:SF4~50s ribosomal protein l5~HMMPanther:PTHR11994~family not named~ribosomal protein l5;gbkey=misc_feature;gene=rplE;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79475 79574 . + . ID=id-GGE_0812-3;Dbxref=InterPro:IPR002132,PFAM:PF00281;Note=superfamily~ribosomal_l5~ribosomal protein l5%3B label: Ribosomal_L5 superfamily;gbkey=misc_feature;gene=rplE;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79655 79688 . + . ID=id-GGE_0812-4;Note=superfamily%3B label: Ribosomal_L5_C superfamily;gbkey=misc_feature;gene=rplE;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79655 79685 . + . ID=id-GGE_0812-5;Dbxref=InterPro:IPR002132,PFAM:PF00673;Note=ribosomal_l5_c~ribosomal protein l5;gbkey=misc_feature;gene=rplE;locus_tag=GGE_0812 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79454 79574 . - . ID=id-AFQR01000015.1:79454..79574;Dbxref=InterPro:IPR020929;Note=PatternScan:PS00358~ribosomal_l5~ribosomal protein l5%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 79954 80259 . + . ID=gene-GGE_0813;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=GGE_0813 GCA_000222085.2|AFQR01000015.1 Genbank CDS 79954 80259 . + 0 ID=cds-EGT82415.1;Parent=gene-GGE_0813;Dbxref=GeneID:1173203,InterPro:IPR001209,InterPro:IPR018271,InterPro:IPR023036,PFAM:PF00253,NCBI_GP:EGT82415.1;Name=EGT82415.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsN;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0813;product=30S ribosomal protein S14;protein_id=EGT82415.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 79954 80257 . + . ID=id-GGE_0813;Dbxref=InterPro:IPR001209,InterPro:IPR023036;Note=superfamily~HMMPanther:PTHR19836:SF1~chloroplast 30s ribosomal protein s14~HMMPanther:PTHR19836~family not named~ribosomal protein s14~HAMAP:MF_00537~ribosomal_s14_1~ribosomal protein s14%2C bacterial/plastid%3B label: Ribosomal_S14 superfamily;gbkey=misc_feature;gene=rpsN;locus_tag=GGE_0813 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80077 80137 . + . ID=id-GGE_0813-2;Note=Gene3D:4.10.830.10;gbkey=misc_feature;gene=rpsN;locus_tag=GGE_0813 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80080 80134 . + . ID=id-GGE_0813-3;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature;gene=rpsN;locus_tag=GGE_0813 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80092 80119 . + . ID=id-GGE_0813-4;Dbxref=InterPro:IPR001209,PFAM:PF00253;Note=ribosomal_s14~ribosomal protein s14;gbkey=misc_feature;gene=rpsN;locus_tag=GGE_0813 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80023 80143 . - . ID=id-AFQR01000015.1:80023..80143;Dbxref=InterPro:IPR018271;Note=PatternScan:PS00527~ribosomal_s14~ribosomal protein s14%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 80296 80688 . + . ID=gene-GGE_0814;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=GGE_0814 GCA_000222085.2|AFQR01000015.1 Genbank CDS 80296 80688 . + 0 ID=cds-EGT82416.1;Parent=gene-GGE_0814;Dbxref=GeneID:1173281,InterPro:IPR000630,PFAM:PF00410,NCBI_GP:EGT82416.1;Name=EGT82416.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsH;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0814;product=30S ribosomal protein S8;protein_id=EGT82416.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80296 80494 . + . ID=id-GGE_0814;Note=Gene3D:3.30.1370.30;gbkey=misc_feature;gene=rpsH;locus_tag=GGE_0814 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80302 80683 . + . ID=id-GGE_0814-2;Dbxref=InterPro:IPR000630;Note=superfamily~HMMPanther:PTHR11758~family not named~ribosomal protein s8%3B label: Ribosomal_S8 superfamily;gbkey=misc_feature;gene=rpsH;locus_tag=GGE_0814 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80311 80674 . + . ID=id-GGE_0814-3;Dbxref=InterPro:IPR000630;Note=superfamily:SSF56047~ribosomal protein s8~ribosomal protein s8;gbkey=misc_feature;gene=rpsH;locus_tag=GGE_0814 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80311 80671 . + . ID=id-GGE_0814-4;Dbxref=InterPro:IPR000630,PFAM:PF00410;Note=ribosomal_s8~ribosomal protein s8;gbkey=misc_feature;gene=rpsH;locus_tag=GGE_0814 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80350 80596 . - . ID=id-AFQR01000015.1:80350..80596;Dbxref=InterPro:IPR000630;Note=PatternScan:PS00053~ribosomal_s8~ribosomal protein s8;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80479 80500 . - . ID=id-AFQR01000015.1:80479..80500;Note=Gene3D:3.30.1490.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 80704 81237 . + . ID=gene-GGE_0815;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank CDS 80704 81237 . + 0 ID=cds-EGT82417.1;Parent=gene-GGE_0815;Dbxref=GeneID:1173060,InterPro:IPR000702,InterPro:IPR002358,InterPro:IPR019906,InterPro:IPR020040,PFAM:PF00347,PIR:PIRSF002162,TIGRFAM:TIGR03654,NCBI_GP:EGT82417.1;Name=EGT82417.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0019843,GO:0003735;gbkey=CDS;gene=rplF;go_component=intracellular|0005622||,ribosome|0005840||;go_function=rRNA binding|0019843||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0815;product=50S ribosomal protein L6;protein_id=EGT82417.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80704 81235 . + . ID=id-GGE_0815;Dbxref=InterPro:IPR000702,PIR:PIRSF002162;Note=multi-dom~ribosomal protein%2C l6p/l6a/l9e/organellar l9 types~ribosomal protein l6%3B label: rplF;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80704 81229 . + . ID=id-GGE_0815-2;Dbxref=InterPro:IPR000702;Note=HMMPanther:PTHR11655:SF6~50s ribosomal protein l6~HMMPanther:PTHR11655~family not named~ribosomal protein l6;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80710 81229 . + . ID=id-GGE_0815-3;Dbxref=InterPro:IPR019906,TIGRFAM:TIGR03654;Note=l6_bact: ribosomal protein l6~ribosomal protein l6%2C bacterial-type;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80710 80947 . + . ID=id-GGE_0815-4;Dbxref=InterPro:IPR020040;Note=Gene3D:3.90.930.12~ribosomal protein l6%2C alpha-beta domain;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80719 80938 . + . ID=id-GGE_0815-5;Dbxref=InterPro:IPR020040;Note=superfamily:SSF56053~ribosomal protein l6~ribosomal protein l6%2C alpha-beta domain;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80737 80920 . + . ID=id-GGE_0815-6;Dbxref=InterPro:IPR020040,PFAM:PF00347;Note=superfamily~ribosomal_l6~ribosomal protein l6%2C alpha-beta domain%3B label: Ribosomal_L6 superfamily;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80953 80989 . + . ID=id-GGE_0815-7;Dbxref=InterPro:IPR020040;Note=Gene3D:3.90.930.12~ribosomal protein l6%2C alpha-beta domain;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80953 80971 . + . ID=id-GGE_0815-8;Dbxref=InterPro:IPR020040;Note=superfamily:SSF56053~ribosomal protein l6~ribosomal protein l6%2C alpha-beta domain;gbkey=misc_feature;gene=rplF;locus_tag=GGE_0815 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80731 81166 . - . ID=id-AFQR01000015.1:80731..81166;Dbxref=InterPro:IPR002358;Note=PatternScan:PS00525~ribosomal_l6_1~ribosomal protein l6%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80755 81001 . - . ID=id-AFQR01000015.1:80755..81001;Dbxref=InterPro:IPR019906;Note=FPrintScan:PR00059~ribosomall6~ribosomal protein l6%2C bacterial-type;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80770 81127 . - . ID=id-AFQR01000015.1:80770..81127;Dbxref=InterPro:IPR019906;Note=FPrintScan:PR00059~ribosomall6~ribosomal protein l6%2C bacterial-type;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80782 80917 . - . ID=id-AFQR01000015.1:80782..80917;Dbxref=InterPro:IPR019906;Note=FPrintScan:PR00059~ribosomall6~ribosomal protein l6%2C bacterial-type;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 80929 80974 . - . ID=id-AFQR01000015.1:80929..80974;Dbxref=InterPro:IPR020040,PFAM:PF00347;Note=superfamily~ribosomal_l6~ribosomal protein l6%2C alpha-beta domain%3B label: Ribosomal_L6 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 81251 81604 . + . ID=gene-GGE_0816;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank CDS 81251 81604 . + 0 ID=cds-EGT82418.1;Parent=gene-GGE_0816;Dbxref=GeneID:1172979,InterPro:IPR004389,InterPro:IPR005484,PFAM:PF00861,TIGRFAM:TIGR00060,NCBI_GP:EGT82418.1;Name=EGT82418.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplR;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0816;product=50S ribosomal protein L18;protein_id=EGT82418.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81251 81602 . + . ID=id-GGE_0816;Note=HMMPanther:PTHR12899~family not named;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81257 81599 . + . ID=id-GGE_0816-2;Dbxref=InterPro:IPR005484,PFAM:PF00861;Note=ribosomal_l18p~ribosomal protein l18/l5;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81260 81596 . + . ID=id-GGE_0816-3;Dbxref=InterPro:IPR004389,TIGRFAM:TIGR00060;Note=l18_bact: ribosomal protein l18~ribosomal protein l18%2C bacterial~Gene3D:3.30.420.100;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81269 81281 . + . ID=id-GGE_0816-4;Note=seg;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81305 81545 . + . ID=id-GGE_0816-5;Note=specific~superfamily%3B label: Ribosomal_L18_L5e;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81308 81548 . + . ID=id-GGE_0816-6;Note=superfamily:SSF53137~translational machinery components;gbkey=misc_feature;gene=rplR;locus_tag=GGE_0816 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81296 81461 . - . ID=id-AFQR01000015.1:81296..81461;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 81619 82119 . + . ID=gene-GGE_0817;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank CDS 81619 82119 . + 0 ID=cds-EGT82419.1;Parent=gene-GGE_0817;Dbxref=GeneID:1173266,InterPro:IPR000851,InterPro:IPR005324,InterPro:IPR005712,InterPro:IPR013810,InterPro:IPR014720,InterPro:IPR014721,InterPro:IPR018192,InterPro:IPR020568,PFAM:PF00333,PFAM:PF03719,TIGRFAM:TIGR01021,NCBI_GP:EGT82419.1;Name=EGT82419.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003723,GO:0003735;gbkey=CDS;gene=rpsE;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0817;product=30S ribosomal protein S5;protein_id=EGT82419.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81619 82117 . + . ID=id-GGE_0817;Note=multi-dom%3B label: rpsE;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81619 81685 . + . ID=id-GGE_0817-2;Note=coiled-coil;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81643 82087 . + . ID=id-GGE_0817-3;Dbxref=InterPro:IPR005712,TIGRFAM:TIGR01021;Note=rpse_bact: ribosomal protein s5~ribosomal protein s5%2C bacterial-type;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81649 82087 . + . ID=id-GGE_0817-4;Dbxref=InterPro:IPR000851;Note=HMMPanther:PTHR13718:SF60~subfamily not named~HMMPanther:PTHR13718~family not named~ribosomal protein s5;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81649 81826 . + . ID=id-GGE_0817-5;Note=superfamily:SSF54768~dsrna-binding domain-like;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81649 81820 . + . ID=id-GGE_0817-6;Note=superfamily%3B label: Ribosomal_S5 superfamily;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81649 81817 . + . ID=id-GGE_0817-7;Dbxref=InterPro:IPR013810,PFAM:PF00333;Note=ribosomal_s5~ribosomal protein s5;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81649 81808 . + . ID=id-GGE_0817-8;Dbxref=InterPro:IPR014720;Note=Gene3D:3.30.160.20~double-stranded rna-binding-like;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81652 81811 . + . ID=id-GGE_0817-9;Dbxref=InterPro:IPR013810;Note=ProfileScan:PS50881~s5_dsrbd~ribosomal protein s5;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81703 81718 . + . ID=id-GGE_0817-10;Dbxref=InterPro:IPR018192;Note=PatternScan:PS00585~ribosomal_s5~ribosomal protein s5%2C conserved site;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81847 81865 . + . ID=id-GGE_0817-11;Dbxref=InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81856 81862 . + . ID=id-GGE_0817-12;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=rpsE;locus_tag=GGE_0817 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 81841 81874 . - . ID=id-AFQR01000015.1:81841..81874;Dbxref=InterPro:IPR005324,PFAM:PF03719;Note=superfamily~ribosomal_s5_c~ribosomal protein s5%3B label: Ribosomal_S5_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 82126 82305 . + . ID=gene-GGE_0818;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank CDS 82126 82305 . + 0 ID=cds-EGT82420.1;Parent=gene-GGE_0818;Dbxref=InterPro:IPR005996,InterPro:IPR016082,InterPro:IPR018038,PFAM:PF00327,PIR:PIRSF002211,TIGRFAM:TIGR01308,NCBI_GP:EGT82420.1;Name=EGT82420.1;Ontology_term=GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmD;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0818;product=50S ribosomal protein L30;protein_id=EGT82420.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82126 82303 . + . ID=id-GGE_0818;Dbxref=InterPro:IPR005996,PIR:PIRSF002211;Note=ribosomal protein l30p~ribosomal protein l30%2C bacterial-type;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82132 82300 . + . ID=id-GGE_0818-2;Dbxref=InterPro:IPR016082;Note=superfamily:SSF55129~ribosomal protein l30p/l7e~ribosomal protein l30%2C ferredoxin-like fold domain~Gene3D:3.30.1390.20~ribosomal protein l30%2C ferredoxin-like fold domain;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82138 82282 . + . ID=id-GGE_0818-3;Dbxref=InterPro:IPR016082,PFAM:PF00327;Note=ribosomal_l30~ribosomal protein l30%2C ferredoxin-like fold domain;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82141 82291 . + . ID=id-GGE_0818-4;Dbxref=InterPro:IPR005996,TIGRFAM:TIGR01308;Note=rpmd_bact: ribosomal protein l30~ribosomal protein l30%2C bacterial-type;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82141 82288 . + . ID=id-GGE_0818-5;Note=specific~superfamily%3B label: Ribosomal_L30;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82195 82225 . + . ID=id-GGE_0818-6;Dbxref=InterPro:IPR018038;Note=PatternScan:PS00634~ribosomal_l30~ribosomal protein l30%2C conserved site;gbkey=misc_feature;gene=rpmD;locus_tag=GGE_0818 GCA_000222085.2|AFQR01000015.1 Genbank gene 82309 82743 . + . ID=gene-GGE_0819;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank CDS 82309 82743 . + 0 ID=cds-EGT82421.1;Parent=gene-GGE_0819;Dbxref=GeneID:1172965,InterPro:IPR001196,InterPro:IPR005749,InterPro:IPR021131,PFAM:PF00828,TIGRFAM:TIGR01071,NCBI_GP:EGT82421.1;Name=EGT82421.1;Ontology_term=GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003735;gbkey=CDS;gene=rplO;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0819;product=50S ribosomal protein L15;protein_id=EGT82421.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82309 82741 . + . ID=id-GGE_0819;Dbxref=InterPro:IPR005749;Note=superfamily~HMMPanther:PTHR12934~family not named~ribosomal protein l15%2C bacterial-type%3B label: Ribosomal_L18e superfamily;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82315 82735 . + . ID=id-GGE_0819-2;Dbxref=InterPro:IPR005749,TIGRFAM:TIGR01071;Note=rplo_bact: ribosomal protein l15~ribosomal protein l15%2C bacterial-type;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82321 82729 . + . ID=id-GGE_0819-3;Dbxref=InterPro:IPR021131;Note=superfamily:SSF52080~ribosomal proteins l15p and l18e~ribosomal protein l18e/l15;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82360 82372 . + . ID=id-GGE_0819-4;Note=seg;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82390 82660 . + . ID=id-GGE_0819-5;Dbxref=InterPro:IPR021131,PFAM:PF00828;Note=ribosomal_l18e~ribosomal protein l18e/l15;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82405 82645 . + . ID=id-GGE_0819-6;Note=Gene3D:3.100.10.10;gbkey=misc_feature;gene=rplO;locus_tag=GGE_0819 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82345 82696 . - . ID=id-AFQR01000015.1:82345..82696;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82348 82432 . - . ID=id-AFQR01000015.1:82348..82432;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82402 82636 . - . ID=id-AFQR01000015.1:82402..82636;Dbxref=InterPro:IPR001196;Note=PatternScan:PS00475~ribosomal_l15~ribosomal protein l15%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 82751 84076 . + . ID=gene-GGE_0820;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank CDS 82751 84076 . + 0 ID=cds-EGT82422.1;Parent=gene-GGE_0820;Dbxref=GeneID:1173419,InterPro:IPR002208,InterPro:IPR023201,PFAM:PF00344,PIR:PIRSF004557,TIGRFAM:TIGR00967,NCBI_GP:EGT82422.1;Name=EGT82422.1;Ontology_term=GO:0015031,GO:0016020,GO:0015450;gbkey=CDS;gene=secY;go_component=membrane|0016020||;go_function=P-P-bond-hydrolysis-driven protein transmembrane transporter activity|0015450||;go_process=protein transport|0015031||;locus_tag=GGE_0820;product=Preprotein translocase subunit secY;protein_id=EGT82422.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82751 84065 . + . ID=id-GGE_0820;Dbxref=InterPro:IPR002208,PIR:PIRSF004557;Note=preprotein translocase sec%2C secy/sec61-alpha subunit~secy protein;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82784 84026 . + . ID=id-GGE_0820-2;Dbxref=InterPro:IPR023201;Note=Gene3D:1.10.3370.10~secy subunit domain;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82796 83978 . + . ID=id-GGE_0820-3;Dbxref=InterPro:IPR023201;Note=superfamily:SSF103491~preprotein translocase secy subunit~secy subunit domain;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82799 84020 . + . ID=id-GGE_0820-4;Dbxref=InterPro:IPR002208;Note=HMMPanther:PTHR10906:SF2~protein translocase secy subunit~HMMPanther:PTHR10906~secy/sec61-alpha family member~secy protein;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82805 83993 . + . ID=id-GGE_0820-5;Note=multi-dom%3B label: secY;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82811 83975 . + . ID=id-GGE_0820-6;Dbxref=InterPro:IPR002208,TIGRFAM:TIGR00967;Note=3a0501s007: preprotein translocase%2C secy s~secy protein;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82814 82820 . + . ID=id-GGE_0820-7;Note=transmembrane_regions;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82979 83771 . + . ID=id-GGE_0820-8;Dbxref=InterPro:IPR002208,PFAM:PF00344;Note=secy~secy protein;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82979 83741 . + . ID=id-GGE_0820-9;Note=superfamily%3B label: SecY superfamily;gbkey=misc_feature;gene=secY;locus_tag=GGE_0820 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82781 83399 . - . ID=id-AFQR01000015.1:82781..83399;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82790 83969 . - . ID=id-AFQR01000015.1:82790..83969;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82805 83264 . - . ID=id-AFQR01000015.1:82805..83264;Dbxref=InterPro:IPR002208;Note=PatternScan:PS00756~secy_2~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82808 83951 . - . ID=id-AFQR01000015.1:82808..83951;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82808 83855 . - . ID=id-AFQR01000015.1:82808..83855;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82808 82820 . - . ID=id-AFQR01000015.1:82808..82820;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82811 83942 . - . ID=id-AFQR01000015.1:82811..83942;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82811 83561 . - . ID=id-AFQR01000015.1:82811..83561;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82811 82979 . - . ID=id-AFQR01000015.1:82811..82979;Dbxref=InterPro:IPR002208;Note=PatternScan:PS00755~secy_1~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82814 82976 . - . ID=id-AFQR01000015.1:82814..82976;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83864 . - . ID=id-AFQR01000015.1:82820..83864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83690 . - . ID=id-AFQR01000015.1:82820..83690;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83675 . - . ID=id-AFQR01000015.1:82820..83675;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83564 . - . ID=id-AFQR01000015.1:82820..83564;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83387 . - . ID=id-AFQR01000015.1:82820..83387;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83291 . - . ID=id-AFQR01000015.1:82820..83291;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83204 . - . ID=id-AFQR01000015.1:82820..83204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 83108 . - . ID=id-AFQR01000015.1:82820..83108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82820 82979 . - . ID=id-AFQR01000015.1:82820..82979;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82823 83285 . - . ID=id-AFQR01000015.1:82823..83285;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82823 83099 . - . ID=id-AFQR01000015.1:82823..83099;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 82829 83207 . - . ID=id-AFQR01000015.1:82829..83207;Dbxref=InterPro:IPR002208;Note=FPrintScan:PR00303~secytrnlcase~secy protein;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 84105 84218 . + . ID=gene-GGE_0821;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=GGE_0821 GCA_000222085.2|AFQR01000015.1 Genbank CDS 84105 84218 . + 0 ID=cds-EGT82423.1;Parent=gene-GGE_0821;Dbxref=InterPro:IPR000473,PFAM:PF00444,TIGRFAM:TIGR01022,NCBI_GP:EGT82423.1;Name=EGT82423.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmJ;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0821;product=50S ribosomal protein L36;protein_id=EGT82423.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84105 84216 . + . ID=id-GGE_0821;Dbxref=InterPro:IPR000473,PFAM:PF00444,TIGRFAM:TIGR01022;Note=superfamily~superfamily:SSF57840~ribosomal protein l36~ribosomal protein l36~ribosomal_l36~ribosomal protein l36~HMMPanther:PTHR18804~family not named~ribosomal protein l36~rpmj_bact: ribosomal protein l36~ribosomal protein l36~HAMAP:MF_00251~ribosomal_l36~ribosomal protein l36%3B label: Ribosomal_L36 superfamily;gbkey=misc_feature;gene=rpmJ;locus_tag=GGE_0821 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84132 84192 . + . ID=id-GGE_0821-2;Note=BlastProDom:PD002101~rl36_haein_p46361;gbkey=misc_feature;gene=rpmJ;locus_tag=GGE_0821 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84138 84183 . + . ID=id-GGE_0821-3;Dbxref=InterPro:IPR000473;Note=PatternScan:PS00828~ribosomal_l36~ribosomal protein l36;gbkey=misc_feature;gene=rpmJ;locus_tag=GGE_0821 GCA_000222085.2|AFQR01000015.1 Genbank gene 84360 84716 . + . ID=gene-GGE_0822;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank CDS 84360 84716 . + 0 ID=cds-EGT82424.1;Parent=gene-GGE_0822;Dbxref=GeneID:158706236,InterPro:IPR001892,InterPro:IPR010979,InterPro:IPR018269,InterPro:IPR019980,PFAM:PF00416,PIR:PIRSF002134,TIGRFAM:TIGR03631,NCBI_GP:EGT82424.1;Name=EGT82424.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003723,GO:0003676,GO:0003735;gbkey=CDS;gene=rpsM;go_component=intracellular|0005622||,ribosome|0005840||;go_function=RNA binding|0003723||,nucleic acid binding|0003676||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0822;product=30S ribosomal protein S13;protein_id=EGT82424.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84360 84714 . + . ID=id-GGE_0822;Dbxref=InterPro:IPR001892,PIR:PIRSF002134;Note=multi-dom~ribosomal protein%2C s13p/s13a/s18e/organellar s13 types~ribosomal protein s13%3B label: RpsM;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84366 84711 . + . ID=id-GGE_0822-2;Dbxref=InterPro:IPR010979;Note=superfamily~superfamily:SSF46946~s13-like h2th domain~ribosomal protein s13-like%2C h2th%3B label: Ribosomal_S13 superfamily;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84366 84705 . + . ID=id-GGE_0822-3;Note=HMMPanther:PTHR10871~30s ribosomal protein s13/40s ribosomal protein s18;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84366 84552 . + . ID=id-GGE_0822-4;Note=Gene3D:1.10.8.50;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84369 84696 . + . ID=id-GGE_0822-5;Dbxref=InterPro:IPR019980,TIGRFAM:TIGR03631;Note=bact_s13: 30s ribosomal protein s13~ribosomal protein s13%2C bacterial-type;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84369 84678 . + . ID=id-GGE_0822-6;Dbxref=InterPro:IPR001892,PFAM:PF00416;Note=ribosomal_s13~ribosomal protein s13;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84372 84684 . + . ID=id-GGE_0822-7;Dbxref=InterPro:IPR001892;Note=ProfileScan:PS50159~ribosomal_s13_2~ribosomal protein s13;gbkey=misc_feature;gene=rpsM;locus_tag=GGE_0822 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84402 84621 . - . ID=id-AFQR01000015.1:84402..84621;Dbxref=InterPro:IPR018269;Note=PatternScan:PS00646~ribosomal_s13_1~ribosomal protein s13%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84426 84498 . - . ID=id-AFQR01000015.1:84426..84498;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84501 84576 . - . ID=id-AFQR01000015.1:84501..84576;Note=Gene3D:4.10.910.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 84733 85122 . + . ID=gene-GGE_0823;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank CDS 84733 85122 . + 0 ID=cds-EGT82425.1;Parent=gene-GGE_0823;Dbxref=GeneID:166231814,InterPro:IPR001971,InterPro:IPR018102,InterPro:IPR019981,PFAM:PF00411,PIR:PIRSF002131,TIGRFAM:TIGR03632,NCBI_GP:EGT82425.1;Name=EGT82425.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsK;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0823;product=30S ribosomal protein S11;protein_id=EGT82425.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84733 85120 . + . ID=id-GGE_0823;Dbxref=InterPro:IPR001971,PIR:PIRSF002131;Note=ribosomal protein%2C s11p/s11a/s14e/organellar s11 types~ribosomal protein s11;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84751 84769 . + . ID=id-GGE_0823-2;Note=seg;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84760 85096 . + . ID=id-GGE_0823-3;Dbxref=InterPro:IPR001971;Note=HMMPanther:PTHR11759~family not named~ribosomal protein s11;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84763 85084 . + . ID=id-GGE_0823-4;Dbxref=InterPro:IPR019981,TIGRFAM:TIGR03632;Note=bact_s11: 30s ribosomal protein s11~ribosomal protein s11%2C bacterial-type;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84772 85084 . + . ID=id-GGE_0823-5;Note=superfamily:SSF53137~translational machinery components;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84772 85081 . + . ID=id-GGE_0823-6;Dbxref=InterPro:IPR001971;Note=Gene3D:3.30.420.80~ribosomal protein s11;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84787 85069 . + . ID=id-GGE_0823-7;Note=superfamily%3B label: Ribosomal_S11 superfamily;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84790 85063 . + . ID=id-GGE_0823-8;Dbxref=InterPro:IPR001971,PFAM:PF00411;Note=ribosomal_s11~ribosomal protein s11;gbkey=misc_feature;gene=rpsK;locus_tag=GGE_0823 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 84802 85024 . - . ID=id-AFQR01000015.1:84802..85024;Dbxref=InterPro:IPR018102;Note=PatternScan:PS00054~ribosomal_s11~ribosomal s11%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 85152 85772 . + . ID=gene-GGE_0824;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank CDS 85152 85772 . + 0 ID=cds-EGT82426.1;Parent=gene-GGE_0824;Dbxref=GeneID:172048057,InterPro:IPR001912,InterPro:IPR002942,InterPro:IPR005709,InterPro:IPR018079,InterPro:IPR022801,PFAM:PF00163,PFAM:PF01479,TIGRFAM:TIGR01017,NCBI_GP:EGT82426.1;Name=EGT82426.1;Ontology_term=GO:0006412,GO:0005622,GO:0015935,GO:0003723,GO:0019843,GO:0003735;gbkey=CDS;gene=rpsD;go_component=intracellular|0005622||,small ribosomal subunit|0015935||;go_function=RNA binding|0003723||,rRNA binding|0019843||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0824;product=30S ribosomal protein S4;protein_id=EGT82426.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85152 85770 . + . ID=id-GGE_0824;Note=multi-dom%3B label: rpsD;gbkey=misc_feature;gene=rpsD;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85158 85767 . + . ID=id-GGE_0824-2;Dbxref=InterPro:IPR022801;Note=superfamily:SSF55174~alpha-l rna-binding motif~HMMPanther:PTHR11831:SF5~subfamily not named~HMMPanther:PTHR11831~family not named~ribosomal protein s4/s9;gbkey=misc_feature;gene=rpsD;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85158 85434 . + . ID=id-GGE_0824-3;Dbxref=InterPro:IPR001912,PFAM:PF00163;Note=superfamily~ribosomal_s4~ribosomal protein s4/s9%3B label: Ribosomal_S4 superfamily;gbkey=misc_feature;gene=rpsD;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85161 85764 . + . ID=id-GGE_0824-4;Dbxref=InterPro:IPR005709,TIGRFAM:TIGR01017;Note=rpsd_bact: ribosomal protein s4~ribosomal protein s4%2C bacterial-type;gbkey=misc_feature;gene=rpsD;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85161 85458 . + . ID=id-GGE_0824-5;Note=Gene3D:1.10.1050.10;gbkey=misc_feature;gene=rpsD;locus_tag=GGE_0824 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85227 85434 . - . ID=id-AFQR01000015.1:85227..85434;Dbxref=InterPro:IPR018079;Note=PatternScan:PS00632~ribosomal_s4~ribosomal protein s4%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85293 85443 . - . ID=id-AFQR01000015.1:85293..85443;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85332 85443 . - . ID=id-AFQR01000015.1:85332..85443;Note=specific~superfamily%3B label: S4;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85335 85440 . - . ID=id-AFQR01000015.1:85335..85440;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85410 85467 . - . ID=id-AFQR01000015.1:85410..85467;Note=Gene3D:3.10.290.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 85804 86793 . + . ID=gene-GGE_0825;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank CDS 85804 86793 . + 0 ID=cds-EGT82427.1;Parent=gene-GGE_0825;Dbxref=GeneID:172048058,InterPro:IPR009025,InterPro:IPR011260,InterPro:IPR011261,InterPro:IPR011262,InterPro:IPR011773,PFAM:PF01000,PFAM:PF01193,PFAM:PF03118,TIGRFAM:TIGR02027,NCBI_GP:EGT82427.1;Name=EGT82427.1;Ontology_term=GO:0006351,GO:0006350,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||,DNA-directed RNA polymerase activity|0003899||,protein dimerization activity|0046983||;go_process=transcription DNA-dependent|0006351||,transcription|0006350||;locus_tag=GGE_0825;product=DNA-directed RNA polymerase subunit alpha;protein_id=EGT82427.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85804 86737 . + . ID=id-GGE_0825;Note=HMMPanther:PTHR11800:SF4~dna-directed rna polymerase subunit alpha~HMMPanther:PTHR11800~family not named;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85816 86500 . + . ID=id-GGE_0825-2;Dbxref=InterPro:IPR009025;Note=superfamily:SSF55257~rbp11-like subunits of rna polymerase~dna-directed rna polymerase%2C rbp11-like;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85819 86743 . + . ID=id-GGE_0825-3;Dbxref=InterPro:IPR011773;Note=HAMAP:MF_00059~rnapol_bact_rpoa~dna-directed rna polymerase%2C alpha subunit;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85822 86737 . + . ID=id-GGE_0825-4;Note=multi-dom%3B label: PRK05182;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85846 86458 . + . ID=id-GGE_0825-5;Note=specific~superfamily%3B label: RNAP_alpha_NTD;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85873 86689 . + . ID=id-GGE_0825-6;Dbxref=InterPro:IPR011773,TIGRFAM:TIGR02027;Note=rpoa: dna-directed rna polymerase%2C alpha sub~dna-directed rna polymerase%2C alpha subunit;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85888 86419 . + . ID=id-GGE_0825-7;Dbxref=InterPro:IPR011261,PFAM:PF01193;Note=rna_pol_l~dna-directed rna polymerase%2C dimerization;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85963 86182 . + . ID=id-GGE_0825-8;Dbxref=InterPro:IPR011262;Note=superfamily:SSF56553~insert subdomain of rna polymerase alpha subunit~dna-directed rna polymerase%2C insert domain;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85963 86179 . + . ID=id-GGE_0825-9;Dbxref=InterPro:IPR011262;Note=Gene3D:2.170.120.12~dna-directed rna polymerase%2C insert domain;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85984 86095 . + . ID=id-GGE_0825-10;Dbxref=InterPro:IPR011262,PFAM:PF01000;Note=rna_pol_a_bac~dna-directed rna polymerase%2C insert domain;gbkey=misc_feature;gene=rpoA;locus_tag=GGE_0825 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85990 86548 . - . ID=id-AFQR01000015.1:85990..86548;Note=superfamily%3B label: RNA_pol_A_CTD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 85999 86536 . - . ID=id-AFQR01000015.1:85999..86536;Dbxref=InterPro:IPR011260,PFAM:PF03118;Note=rna_pol_a_ctd~rna polymerase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86026 86572 . - . ID=id-AFQR01000015.1:86026..86572;Dbxref=InterPro:IPR011260;Note=BlastProDom:PD001179~q4qm97_haei8_q4qm97~rna polymerase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86047 86551 . - . ID=id-AFQR01000015.1:86047..86551;Dbxref=InterPro:IPR011260;Note=superfamily:SSF47789~c-terminal domain of rna polymerase alpha subunit~rna polymerase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86050 86545 . - . ID=id-AFQR01000015.1:86050..86545;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 86834 87220 . + . ID=gene-GGE_0826;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank CDS 86834 87220 . + 0 ID=cds-EGT82428.1;Parent=gene-GGE_0826;Dbxref=GeneID:1172975,InterPro:IPR000456,PFAM:PF01196,TIGRFAM:TIGR00059,NCBI_GP:EGT82428.1;Name=EGT82428.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplQ;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0826;product=50S ribosomal protein L17;protein_id=EGT82428.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86834 87191 . + . ID=id-GGE_0826;Dbxref=InterPro:IPR000456;Note=HMMPanther:PTHR14413:SF13~subfamily not named~HMMPanther:PTHR14413~family not named~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86843 87176 . + . ID=id-GGE_0826-2;Dbxref=InterPro:IPR000456;Note=Gene3D:3.90.1030.10~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86846 87173 . + . ID=id-GGE_0826-3;Note=superfamily%3B label: Ribosomal_L17 superfamily;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86849 87170 . + . ID=id-GGE_0826-4;Dbxref=InterPro:IPR000456;Note=HAMAP:MF_01368~ribosomal_l17~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86852 87170 . + . ID=id-GGE_0826-5;Dbxref=InterPro:IPR000456,TIGRFAM:TIGR00059;Note=l17: ribosomal protein l17~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86876 87146 . + . ID=id-GGE_0826-6;Dbxref=InterPro:IPR000456;Note=superfamily:SSF64263~prokaryotic ribosomal protein l17~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86894 87125 . + . ID=id-GGE_0826-7;Dbxref=InterPro:IPR000456,PFAM:PF01196;Note=ribosomal_l17~ribosomal protein l17;gbkey=misc_feature;gene=rplQ;locus_tag=GGE_0826 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 86903 86936 . - . ID=id-AFQR01000015.1:86903..86936;Dbxref=InterPro:IPR000456;Note=PatternScan:PS01167~ribosomal_l17~ribosomal protein l17;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 87405 87869 . + . ID=gene-GGE_0827;Name=GGE_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0827 GCA_000222085.2|AFQR01000015.1 Genbank CDS 87405 87869 . + 0 ID=cds-EGT82429.1;Parent=gene-GGE_0827;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT82429.1;Name=EGT82429.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_0827;product=transposase like protein;protein_id=EGT82429.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 87420 87798 . + . ID=id-GGE_0827;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0827 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 87423 87798 . + . ID=id-GGE_0827-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0827 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 87450 87762 . + . ID=id-GGE_0827-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_0827 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 87453 87759 . + . ID=id-GGE_0827-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0827 GCA_000222085.2|AFQR01000015.1 Genbank gene 88002 88340 . + . ID=gene-GGE_0828;Name=GGE_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0828 GCA_000222085.2|AFQR01000015.1 Genbank CDS 88002 88340 . + 0 ID=cds-EGT82430.1;Parent=gene-GGE_0828;Dbxref=NCBI_GP:EGT82430.1;Name=EGT82430.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_0828;product=putative lipoprotein;protein_id=EGT82430.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 88002 88053 . + . ID=id-GGE_0828;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0828 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 88470 88500 . + . ID=id-AFQR01000015.1:88470..88500;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 88622 89332 . + . ID=gene-GGE_0829;Name=GGE_0829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0829 GCA_000222085.2|AFQR01000015.1 Genbank CDS 88622 89332 . + 0 ID=cds-EGT82431.1;Parent=gene-GGE_0829;Dbxref=GeneID:254360937,NCBI_GP:EGT82431.1;Name=EGT82431.1;Note=ZP_04977083;gbkey=CDS;locus_tag=GGE_0829;product=putative lipoprotein;protein_id=EGT82431.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 88622 88685 . + . ID=id-GGE_0829;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0829 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 88652 88682 . + . ID=id-GGE_0829-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0829 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 88691 89237 . - . ID=id-AFQR01000015.1:88691..89237;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 89972 92317 . - . ID=gene-GGE_0830;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank CDS 89972 92317 . - 0 ID=cds-EGT82432.1;Parent=gene-GGE_0830;Dbxref=GeneID:81336244,InterPro:IPR005653,InterPro:IPR007543,InterPro:IPR020889,PFAM:PF03968,PFAM:PF04453,NCBI_GP:EGT82432.1;Name=EGT82432.1;Ontology_term=GO:0043165,GO:0016044,GO:0010033,GO:0009279,GO:0019867;gbkey=CDS;gene=lptD;go_component=cell outer membrane|0009279||,outer membrane|0019867||;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||,cellular membrane organization|0016044||,response to organic substance|0010033||;locus_tag=GGE_0830;product=LPS-assembly protein lptD;protein_id=EGT82432.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 89972 92306 . - . ID=id-GGE_0830;Note=multi-dom%3B label: PRK03761;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 89987 90527 . - . ID=id-GGE_0830-2;Note=superfamily%3B label: OstA superfamily;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 89990 92297 . - . ID=id-GGE_0830-3;Dbxref=InterPro:IPR020889;Note=HAMAP:MF_01411~osta~lipopolysccharide assembly%2C lptd;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 89990 90524 . - . ID=id-GGE_0830-4;Dbxref=InterPro:IPR005653,PFAM:PF03968;Note=osta~organic solvent tolerance-like;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 90110 90359 . - . ID=id-GGE_0830-5;Note=Gene3D:2.60.450.10;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 90866 91148 . - . ID=id-GGE_0830-6;Note=superfamily%3B label: OstA_C superfamily;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 90869 91145 . - . ID=id-GGE_0830-7;Dbxref=InterPro:IPR007543,PFAM:PF04453;Note=osta_c~organic solvent tolerance protein;gbkey=misc_feature;gene=lptD;locus_tag=GGE_0830 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 92268 92277 . + . ID=id-AFQR01000015.1:92268..92277;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 92481 92951 . - . ID=gene-GGE_0831;Name=GGE_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0831 GCA_000222085.2|AFQR01000015.1 Genbank CDS 92481 92951 . - 0 ID=cds-EGT82433.1;Parent=gene-GGE_0831;Dbxref=GeneID:325579273,NCBI_GP:EGT82433.1;Name=EGT82433.1;Note=ZP_08149229~HMPREF9417_1970;gbkey=CDS;locus_tag=GGE_0831;product=Hypothetical protein;protein_id=EGT82433.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank gene 93016 94425 . - . ID=gene-GGE_0832;Name=GGE_0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank CDS 93016 94425 . - 0 ID=cds-EGT82434.1;Parent=gene-GGE_0832;Dbxref=GeneID:145630472,InterPro:IPR001117,InterPro:IPR006311,InterPro:IPR008972,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07732,TIGRFAM:TIGR01409,NCBI_GP:EGT82434.1;Name=EGT82434.1;Note=ZP_01786252;Ontology_term=GO:0055114,GO:0005507,GO:0016491;gbkey=CDS;go_function=copper ion binding|0005507||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0832;product=SufI;protein_id=EGT82434.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93016 93103 . - . ID=id-GGE_0832;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93028 94414 . - . ID=id-GGE_0832-2;Note=multi-dom%3B label: PRK10883;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93028 93091 . - . ID=id-GGE_0832-3;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93043 94330 . - . ID=id-GGE_0832-4;Note=HMMPanther:PTHR11709:SF2~spore coat protein~HMMPanther:PTHR11709~family not named;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93082 93466 . - . ID=id-GGE_0832-5;Dbxref=InterPro:IPR008972;Note=superfamily:SSF49503~cupredoxins~cupredoxin;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93121 93418 . - . ID=id-GGE_0832-6;Dbxref=InterPro:IPR008972;Note=Gene3D:2.60.40.420~cupredoxin;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93169 93370 . - . ID=id-GGE_0832-7;Note=superfamily%3B label: Cu-oxidase superfamily;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93172 93364 . - . ID=id-GGE_0832-8;Dbxref=InterPro:IPR011707,PFAM:PF07732;Note=cu-oxidase_3~multicopper oxidase%2C type 3;gbkey=misc_feature;locus_tag=GGE_0832 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93052 93703 . + . ID=id-AFQR01000015.1:93052..93703;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93193 93700 . + . ID=id-AFQR01000015.1:93193..93700;Dbxref=InterPro:IPR001117,PFAM:PF00394;Note=cu-oxidase~multicopper oxidase%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93328 94111 . + . ID=id-AFQR01000015.1:93328..94111;Dbxref=InterPro:IPR008972;Note=superfamily:SSF49503~cupredoxins~cupredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93370 93523 . + . ID=id-AFQR01000015.1:93370..93523;Dbxref=InterPro:IPR008972;Note=Gene3D:2.60.40.420~cupredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93427 94012 . + . ID=id-AFQR01000015.1:93427..94012;Dbxref=InterPro:IPR008972;Note=Gene3D:2.60.40.420~cupredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93433 93532 . + . ID=id-AFQR01000015.1:93433..93532;Dbxref=InterPro:IPR008972;Note=superfamily:SSF49503~cupredoxins~cupredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 93807 93816 . + . ID=id-AFQR01000015.1:93807..93816;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94367 94376 . + . ID=id-AFQR01000015.1:94367..94376;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 94427 95149 . - . ID=gene-GGE_0833;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank CDS 94427 95149 . - 0 ID=cds-EGT82435.1;Parent=gene-GGE_0833;Dbxref=GeneID:1172534,InterPro:IPR002123,InterPro:IPR004552,PFAM:PF01553,TIGRFAM:TIGR00530,NCBI_GP:EGT82435.1;Name=EGT82435.1;Ontology_term=GO:0008152,GO:0008654,GO:0016020,GO:0003841,GO:0008415;gbkey=CDS;gene=plsC;go_component=membrane|0016020||;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||,acyltransferase activity|0008415||;go_process=metabolic process|0008152||,phospholipid biosynthetic process|0008654||;locus_tag=GGE_0833;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=EGT82435.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94427 95147 . - . ID=id-GGE_0833;Note=HMMPanther:PTHR10434:SF0~1-acyl-sn-glycerol-3-phosphate acyltransferase~HMMPanther:PTHR10434~1-acyl-sn-glycerol-3-phosphate acyltransferase;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94439 95132 . - . ID=id-GGE_0833-2;Note=superfamily:SSF69593~glycerol-3-phosphate (1)-acyltransferase;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94439 94478 . - . ID=id-GGE_0833-3;Note=seg;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94448 94496 . - . ID=id-GGE_0833-4;Note=transmembrane_regions;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94544 94979 . - . ID=id-GGE_0833-5;Note=specific~superfamily%3B label: LPLAT_AGPAT-like;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94577 94820 . - . ID=id-GGE_0833-6;Dbxref=InterPro:IPR004552,TIGRFAM:TIGR00530;Note=agp_acyltrn: 1-acylglycerol-3-phosphate o~1-acyl-sn-glycerol-3-phosphate acyltransferase;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94601 94793 . - . ID=id-GGE_0833-7;Dbxref=InterPro:IPR002123,PFAM:PF01553;Note=acyltransferase~phospholipid/glycerol acyltransferase;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94604 94967 . - . ID=id-GGE_0833-8;Note=Gene3D:3.40.1130.10;gbkey=misc_feature;gene=plsC;locus_tag=GGE_0833 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 94484 94721 . + . ID=id-AFQR01000015.1:94484..94721;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 95235 95948 . + . ID=gene-GGE_0834;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank CDS 95235 95948 . + 0 ID=cds-EGT82436.1;Parent=gene-GGE_0834;Dbxref=GeneID:81336241,InterPro:IPR004843,InterPro:IPR010138,PFAM:PF00149,TIGRFAM:TIGR01854,NCBI_GP:EGT82436.1;Name=EGT82436.1;Ontology_term=GO:0009245,GO:0005737,GO:0016787,GO:0016462;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||;go_function=hydrolase activity|0016787||,pyrophosphatase activity|0016462||;go_process=lipid A biosynthetic process|0009245||;locus_tag=GGE_0834;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=EGT82436.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95235 95946 . + . ID=id-GGE_0834;Dbxref=InterPro:IPR010138;Note=HAMAP:MF_00575~lpxh~udp-2%2C3-diacylglucosamine hydrolase;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95235 95925 . + . ID=id-GGE_0834-2;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95247 95919 . + . ID=id-GGE_0834-3;Dbxref=InterPro:IPR010138,TIGRFAM:TIGR01854;Note=lipid_a_lpxh: udp-2%2C3-diacylglucosamine~udp-2%2C3-diacylglucosamine hydrolase;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95250 95925 . + . ID=id-GGE_0834-4;Note=multi-dom%3B label: COG2908;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95250 95871 . + . ID=id-GGE_0834-5;Note=specific~superfamily%3B label: MPP_superfamily superfamily;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95253 95817 . + . ID=id-GGE_0834-6;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=metallophos~metallo-dependent phosphatase;gbkey=misc_feature;gene=lpxH;locus_tag=GGE_0834 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95367 95775 . - . ID=id-AFQR01000015.1:95367..95775;Note=Gene3D:3.60.21.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95965 95974 . - . ID=id-AFQR01000015.1:95965..95974;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 95981 96796 . - . ID=gene-GGE_0835;Name=GGE_0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank CDS 95981 96796 . - 0 ID=cds-EGT82437.1;Parent=gene-GGE_0835;Dbxref=GeneID:1175770,InterPro:IPR006151,InterPro:IPR013708,InterPro:IPR016040,PFAM:PF01488,PFAM:PF08501,NCBI_GP:EGT82437.1;Name=EGT82437.1;Note=HI_0607;Ontology_term=GO:0008152,GO:0055114,GO:0005737,GO:0005488,GO:0003824,GO:0004764;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=binding|0005488||,catalytic activity|0003824||,shikimate 5-dehydrogenase activity|0004764||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0835;product=Shikimate 5-dehydrogenase-like protein;protein_id=EGT82437.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95981 96788 . - . ID=id-GGE_0835;Note=multi-dom%3B label: PRK12550;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 95981 96287 . - . ID=id-GGE_0835-2;Note=superfamily:SSF53223~aminoacid dehydrogenase-like domain;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96047 96239 . - . ID=id-GGE_0835-3;Note=Gene3D:3.40.192.10;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96047 96188 . - . ID=id-GGE_0835-4;Dbxref=InterPro:IPR013708,PFAM:PF08501;Note=shikimate_dh_n~shikimate dehydrogenase substrate binding;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96050 96728 . - . ID=id-GGE_0835-5;Note=HMMPanther:PTHR21089~family not named;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96053 96182 . - . ID=id-GGE_0835-6;Note=superfamily%3B label: Shikimate_dh_N superfamily;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96287 96434 . - . ID=id-GGE_0835-7;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96290 96482 . - . ID=id-GGE_0835-8;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96305 96452 . - . ID=id-GGE_0835-9;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_0835 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96248 96335 . + . ID=id-AFQR01000015.1:96248..96335;Dbxref=InterPro:IPR006151,PFAM:PF01488;Note=shikimate_dh~quinate/shikimate 5-dehydrogenase/glutamyl-trna reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 96806 97609 . - . ID=gene-GGE_0836;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank CDS 96806 97609 . - 0 ID=cds-EGT82438.1;Parent=gene-GGE_0836;Dbxref=GeneID:1169183,InterPro:IPR005881,InterPro:IPR010493,InterPro:IPR011004,InterPro:IPR018357,PFAM:PF06426,TIGRFAM:TIGR01172,NCBI_GP:EGT82438.1;Name=EGT82438.1;Ontology_term=GO:0006535,GO:0005737,GO:0009001,GO:0016740;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||;go_function=serine O-acetyltransferase activity|0009001||,transferase activity|0016740||;go_process=cysteine biosynthetic process from serine|0006535||;locus_tag=GGE_0836;product=Serine acetyltransferase;protein_id=EGT82438.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96806 97598 . - . ID=id-GGE_0836;Note=multi-dom%3B label: cysE;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96806 97526 . - . ID=id-GGE_0836-2;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96818 97193 . - . ID=id-GGE_0836-3;Note=Gene3D:1.10.3130.10;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96821 97556 . - . ID=id-GGE_0836-4;Note=HMMPanther:PTHR23416:SF2~serine acetyltransferase~HMMPanther:PTHR23416~family not named;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96821 97121 . - . ID=id-GGE_0836-5;Dbxref=InterPro:IPR010493,PFAM:PF06426;Note=superfamily~satase_n~serine acetyltransferase%3B label: SATase_N superfamily;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97037 97292 . - . ID=id-GGE_0836-6;Dbxref=InterPro:IPR005881,TIGRFAM:TIGR01172;Note=cyse: serine o-acetyltransferase~serine o-acetyltransferase;gbkey=misc_feature;gene=cysE;locus_tag=GGE_0836 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 96893 97400 . + . ID=id-AFQR01000015.1:96893..97400;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97109 97214 . + . ID=id-AFQR01000015.1:97109..97214;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97136 97205 . + . ID=id-AFQR01000015.1:97136..97205;Note=Gene3D:2.160.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 97621 98628 . - . ID=gene-GGE_0837;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank CDS 97621 98628 . - 0 ID=cds-EGT82439.1;Parent=gene-GGE_0837;Dbxref=GeneID:1169998,InterPro:IPR006109,InterPro:IPR006168,InterPro:IPR008927,InterPro:IPR011128,InterPro:IPR013328,InterPro:IPR016040,PFAM:PF01210,PFAM:PF07479,PIR:PIRSF000114,NCBI_GP:EGT82439.1;Name=EGT82439.1;Ontology_term=GO:0005975,GO:0046168,GO:0006072,GO:0008152,GO:0055114,GO:0005737,GO:0009331,GO:0051287,GO:0005488,GO:0003824,GO:0050662,GO:0004367,GO:0016614,GO:0016616,GO:0016491;gbkey=CDS;gene=gpsA;go_component=cytoplasm|0005737||,glycerol-3-phosphate dehydrogenase complex|0009331||;go_function=NAD or NADH binding|0051287||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||,oxidoreductase activity acting on CH-OH group of donors|0016614||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||,oxidoreductase activity|0016491||;go_process=carbohydrate metabolic process|0005975||,glycerol-3-phosphate catabolic process|0046168||,glycerol-3-phosphate metabolic process|0006072||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0837;product=Glycerol-3-phosphate dehydrogenase NADP+;protein_id=EGT82439.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97633 98617 . - . ID=id-GGE_0837;Dbxref=InterPro:IPR006168,PIR:PIRSF000114;Note=glycerol-3-phosphate dehydrogenase (nad)~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97633 98173 . - . ID=id-GGE_0837-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97636 98599 . - . ID=id-GGE_0837-3;Note=multi-dom%3B label: gpsA;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97639 98584 . - . ID=id-GGE_0837-4;Dbxref=InterPro:IPR006168;Note=HAMAP:MF_00394~nad_glyc3p_dehydrog~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97642 98098 . - . ID=id-GGE_0837-5;Dbxref=InterPro:IPR011128,PFAM:PF01210;Note=superfamily~nad_gly3p_dh_n~glycerol-3-phosphate dehydrogenase%2C nad-dependent%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97645 98593 . - . ID=id-GGE_0837-6;Dbxref=InterPro:IPR006168;Note=HMMPanther:PTHR11728~family not named~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97645 98149 . - . ID=id-GGE_0837-7;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97651 97675 . - . ID=id-GGE_0837-8;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature;gene=gpsA;locus_tag=GGE_0837 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97675 98347 . + . ID=id-AFQR01000015.1:97675..98347;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97684 98029 . + . ID=id-AFQR01000015.1:97684..98029;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97687 98197 . + . ID=id-AFQR01000015.1:97687..98197;Dbxref=InterPro:IPR006168;Note=PatternScan:PS00957~nad_g3pdh~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97696 98227 . + . ID=id-AFQR01000015.1:97696..98227;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97696 98152 . + . ID=id-AFQR01000015.1:97696..98152;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 97705 97801 . + . ID=id-AFQR01000015.1:97705..97801;Dbxref=InterPro:IPR006168;Note=FPrintScan:PR00077~gpdhdrgnase~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98050 98185 . + . ID=id-AFQR01000015.1:98050..98185;Dbxref=InterPro:IPR013328;Note=Gene3D:1.10.1040.10~dehydrogenase%2C multihelical;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98050 98170 . + . ID=id-AFQR01000015.1:98050..98170;Dbxref=InterPro:IPR006109,PFAM:PF07479;Note=nad_gly3p_dh_c~glycerol-3-phosphate dehydrogenase%2C nad-dependent;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98056 98170 . + . ID=id-AFQR01000015.1:98056..98170;Note=superfamily%3B label: NAD_Gly3P_dh_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98080 98170 . + . ID=id-AFQR01000015.1:98080..98170;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 98702 101233 . - . ID=gene-GGE_0838;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=GGE_0838 GCA_000222085.2|AFQR01000015.1 Genbank CDS 98702 101233 . - 0 ID=cds-EGT82440.1;Parent=gene-GGE_0838;Dbxref=GeneID:729246,InterPro:IPR000274,PFAM:PF01295,PIR:PIRSF001444,NCBI_GP:EGT82440.1;Name=EGT82440.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||;go_process=cAMP biosynthetic process|0006171||;locus_tag=GGE_0838;product=Adenylate cyclase;protein_id=EGT82440.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98708 101228 . - . ID=id-GGE_0838;Dbxref=InterPro:IPR000274,PIR:PIRSF001444;Note=adenylate cyclase~adenylate cyclase%2C class-i;gbkey=misc_feature;gene=cyaA;locus_tag=GGE_0838 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98708 101216 . - . ID=id-GGE_0838-2;Dbxref=InterPro:IPR000274,PFAM:PF01295;Note=superfamily~multi-dom~adenylate_cycl~adenylate cyclase%2C class-i%3B label: Adenylate_cycl superfamily;gbkey=misc_feature;gene=cyaA;locus_tag=GGE_0838 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 99080 99089 . - . ID=id-GGE_0838-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cyaA;locus_tag=GGE_0838 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 100955 100964 . - . ID=id-GGE_0838-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cyaA;locus_tag=GGE_0838 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98738 99452 . + . ID=id-AFQR01000015.1:98738..99452;Dbxref=InterPro:IPR000274;Note=PatternScan:PS01092~adenylate_cyclase_1_1~adenylate cyclase%2C class-i;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98747 100514 . + . ID=id-AFQR01000015.1:98747..100514;Dbxref=InterPro:IPR000274;Note=PatternScan:PS01093~adenylate_cyclase_1_2~adenylate cyclase%2C class-i;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 98756 98801 . + . ID=id-AFQR01000015.1:98756..98801;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 100257 100266 . + . ID=id-AFQR01000015.1:100257..100266;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 101660 102907 . + . ID=gene-GGE_0839;Name=GGE_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0839 GCA_000222085.2|AFQR01000015.1 Genbank CDS 101660 102907 . + 0 ID=cds-EGT82441.1;Parent=gene-GGE_0839;Dbxref=GeneID:145628423,InterPro:IPR007470,PFAM:PF04375,NCBI_GP:EGT82441.1;Name=EGT82441.1;Note=ZP_01784224;gbkey=CDS;locus_tag=GGE_0839;product=putative uroporphyrin-III C-methyltransferase;protein_id=EGT82441.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 101714 102755 . + . ID=id-GGE_0839;Dbxref=InterPro:IPR007470,PFAM:PF04375;Note=hemx~hemx;gbkey=misc_feature;locus_tag=GGE_0839 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 101834 102638 . + . ID=id-GGE_0839-2;Note=superfamily%3B label: HemX superfamily;gbkey=misc_feature;locus_tag=GGE_0839 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 101720 101774 . - . ID=id-AFQR01000015.1:101720..101774;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 101729 101777 . - . ID=id-AFQR01000015.1:101729..101777;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 101768 101942 . - . ID=id-AFQR01000015.1:101768..101942;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 102917 104203 . + . ID=gene-GGE_0840;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank CDS 102917 104203 . + 0 ID=cds-EGT82442.1;Parent=gene-GGE_0840;Dbxref=InterPro:IPR005254,InterPro:IPR010817,InterPro:IPR011990,PFAM:PF07219,TIGRFAM:TIGR00540,NCBI_GP:EGT82442.1;Name=EGT82442.1;Ontology_term=GO:0042168,GO:0016020,GO:0005488;gbkey=CDS;gene=hemY;go_component=membrane|0016020||;go_function=binding|0005488||;go_process=heme metabolic process|0042168||;locus_tag=GGE_0840;product=Protein hemY;protein_id=EGT82442.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102917 104144 . + . ID=id-GGE_0840;Dbxref=InterPro:IPR005254,TIGRFAM:TIGR00540;Note=multi-dom~hemy_coli: hemy protein~protohaem ix biosynthesis protein%3B label: hemY_coli;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102917 103316 . + . ID=id-GGE_0840-2;Dbxref=InterPro:IPR010817,PFAM:PF07219;Note=hemy_n~hemy;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102929 102977 . + . ID=id-GGE_0840-3;Note=transmembrane_regions;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102932 102968 . + . ID=id-GGE_0840-4;Note=seg;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102983 103253 . + . ID=id-GGE_0840-5;Note=superfamily%3B label: HemY_N superfamily;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 103124 103334 . + . ID=id-GGE_0840-6;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 103163 103292 . + . ID=id-GGE_0840-7;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;gene=hemY;locus_tag=GGE_0840 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 102986 103025 . - . ID=id-AFQR01000015.1:102986..103025;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104173 104182 . - . ID=id-AFQR01000015.1:104173..104182;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank gene 104268 104687 . - . ID=gene-GGE_0841;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=GGE_0841 GCA_000222085.2|AFQR01000015.1 Genbank CDS 104268 104687 . - 0 ID=cds-EGT82443.1;Parent=gene-GGE_0841;Dbxref=GeneID:81336275,InterPro:IPR009315,InterPro:IPR020948,PFAM:PF06146,PIR:PIRSF029598,NCBI_GP:EGT82443.1;Name=EGT82443.1;Ontology_term=GO:0016036,GO:0016021;gbkey=CDS;gene=psiE;go_component=integral to membrane|0016021||;go_process=cellular response to phosphate starvation|0016036||;locus_tag=GGE_0841;product=Protein psiE;protein_id=EGT82443.1;transl_table=11 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104277 104670 . - . ID=id-GGE_0841;Dbxref=InterPro:IPR009315,PIR:PIRSF029598;Note=phosphate-starvation-inducible protein%2C psie type~phosphate-starvation-induced psie;gbkey=misc_feature;gene=psiE;locus_tag=GGE_0841 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104289 104667 . - . ID=id-GGE_0841-2;Note=superfamily%3B label: PsiE superfamily;gbkey=misc_feature;gene=psiE;locus_tag=GGE_0841 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104328 104337 . - . ID=id-GGE_0841-3;Note=transmembrane_regions;gbkey=misc_feature;gene=psiE;locus_tag=GGE_0841 GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104310 104340 . + . ID=id-AFQR01000015.1:104310..104340;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104328 104526 . + . ID=id-AFQR01000015.1:104328..104526;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104337 104598 . + . ID=id-AFQR01000015.1:104337..104598;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104337 104439 . + . ID=id-AFQR01000015.1:104337..104439;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104457 104457 . + . ID=id-AFQR01000015.1:104457..104457;Dbxref=InterPro:IPR020948,PFAM:PF06146;Note=psie~phosphate-starvation-induced psie-like;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104816 104906 . + . ID=id-AFQR01000015.1:104816..104906;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 104945 105073 . + . ID=id-AFQR01000015.1:104945..105073;Note=VFDB hit~VFDB:VFG0706~VFDB hit~VFDB:VFG0694;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 105269 105419 . + . ID=id-AFQR01000015.1:105269..105419;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000015.1 Genbank sequence_feature 105458 105593 . + . ID=id-AFQR01000015.1:105458..105593;Dbxref=InterPro:IPR011089,PFAM:PF07510;Note=superfamily~duf1524~domain of unknown function duf1524 rlof%3B label: DUF1524 superfamily;gbkey=misc_feature ##sequence-region AFQR01000014.1 1 5206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000014.1 Genbank region 1 5206 . + . ID=AFQR01000014.1:1..5206;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000014.1 Genbank gene 89 409 . - . ID=gene-GGE_0728;Name=GGE_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0728 GCA_000222085.2|AFQR01000014.1 Genbank CDS 89 409 . - 0 ID=cds-EGT82448.1;Parent=gene-GGE_0728;Dbxref=InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT82448.1;Name=EGT82448.1;Note=Hypothetical transposase IS200-like;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_0728;product=putative transposase IS200-like protein;protein_id=EGT82448.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 104 392 . - . ID=id-GGE_0728;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0728 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 107 389 . - . ID=id-GGE_0728-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0728 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 134 359 . - . ID=id-GGE_0728-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_0728 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 137 359 . - . ID=id-GGE_0728-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0728 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 552 561 . + . ID=id-AFQR01000014.1:552..561;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank gene 585 1568 . - . ID=gene-GGE_0729;Name=yjeA;gbkey=Gene;gene=yjeA;gene_biotype=protein_coding;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank CDS 585 1568 . - 0 ID=cds-EGT82449.1;Parent=gene-GGE_0729;Dbxref=GeneID:166229785,InterPro:IPR004364,InterPro:IPR004525,InterPro:IPR006195,InterPro:IPR018149,InterPro:IPR018150,PFAM:PF00152,TIGRFAM:TIGR00462,NCBI_GP:EGT82449.1;Name=EGT82449.1;Ontology_term=GO:0006430,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004824,GO:0000166;gbkey=CDS;gene=yjeA;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,lysine-tRNA ligase activity|0004824||,nucleotide binding|0000166||;go_process=lysyl-tRNA aminoacylation|0006430||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0729;product=putative aminoacyl-tRNA synthetase%2C class II;protein_id=EGT82449.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 603 1551 . - . ID=id-GGE_0729;Dbxref=InterPro:IPR004525;Note=HAMAP:MF_00174~yjea~lysyl-trna synthetase-related;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 606 1533 . - . ID=id-GGE_0729-2;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 627 1527 . - . ID=id-GGE_0729-3;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 636 1509 . - . ID=id-GGE_0729-4;Dbxref=InterPro:IPR004364,PFAM:PF00152;Note=trna-synt_2~aminoacyl-trna synthetase%2C class ii (d/k/n);gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 636 1494 . - . ID=id-GGE_0729-5;Note=multi-dom%3B label: PRK09350;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 639 1500 . - . ID=id-GGE_0729-6;Note=superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 642 1497 . - . ID=id-GGE_0729-7;Dbxref=InterPro:IPR018150;Note=HMMPanther:PTHR22594:SF7~lysyl-trna synthetase~HMMPanther:PTHR22594~family not named~aminoacyl-trna synthetase%2C class ii (d/k/n)-like;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 645 1494 . - . ID=id-GGE_0729-8;Dbxref=InterPro:IPR004525,TIGRFAM:TIGR00462;Note=genx: lysyl-trna synthetase-like protein gen~lysyl-trna synthetase-related;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 654 1500 . - . ID=id-GGE_0729-9;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=yjeA;locus_tag=GGE_0729 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 618 690 . + . ID=id-AFQR01000014.1:618..690;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 639 894 . + . ID=id-AFQR01000014.1:639..894;Dbxref=InterPro:IPR018149;Note=FPrintScan:PR00982~trnasynthlys~lysyl-trna synthetase%2C class ii;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1190 1199 . + . ID=id-AFQR01000014.1:1190..1199;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank gene 1729 3570 . + . ID=gene-GGE_0730;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank CDS 1729 3570 . + 0 ID=cds-EGT82450.1;Parent=gene-GGE_0730;Dbxref=GeneID:1169737,InterPro:IPR003952,InterPro:IPR003953,InterPro:IPR004112,InterPro:IPR005884,InterPro:IPR013027,InterPro:IPR014006,InterPro:IPR015939,PFAM:PF00890,PFAM:PF02910,TIGRFAM:TIGR01176,TIGRFAM:TIGR01812,NCBI_GP:EGT82450.1;Name=EGT82450.1;Ontology_term=GO:0009061,GO:0022900,GO:0055114,GO:0009055,GO:0050660,GO:0016627,GO:0016491;gbkey=CDS;gene=frdA;go_function=electron carrier activity|0009055||,flavin adenine dinucleotide binding|0050660||,oxidoreductase activity acting on the CH-CH group of donors|0016627||,oxidoreductase activity|0016491||;go_process=anaerobic respiration|0009061||,electron transport chain|0022900||,oxidation-reduction process|0055114||;locus_tag=GGE_0730;product=Fumarate reductase flavoprotein subunit;protein_id=EGT82450.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1741 3004 . + . ID=id-GGE_0730;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1774 3517 . + . ID=id-GGE_0730-2;Note=HMMPanther:PTHR11632:SF5~succinate dehydrogenase 2 flavoprotein subunit~HMMPanther:PTHR11632~family not named;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1777 3469 . + . ID=id-GGE_0730-3;Note=multi-dom%3B label: PRK09231;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1780 3466 . + . ID=id-GGE_0730-4;Dbxref=InterPro:IPR005884,TIGRFAM:TIGR01176;Note=fum_red_fp: fumarate reductase%2C flavop~fumarate reductase%2C flavoprotein subunit;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1792 3451 . + . ID=id-GGE_0730-5;Dbxref=InterPro:IPR014006,TIGRFAM:TIGR01812;Note=sdha_frda_gneg: succinate dehydrogenas~succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1792 2905 . + . ID=id-GGE_0730-6;Dbxref=InterPro:IPR003953,PFAM:PF00890;Note=fad_binding_2~fumarate reductase/succinate dehydrogenase flavoprotein;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1792 1798 . + . ID=id-GGE_0730-7;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1861 2875 . + . ID=id-GGE_0730-8;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3040 3049 . + . ID=id-GGE_0730-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=frdA;locus_tag=GGE_0730 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1753 2899 . - . ID=id-AFQR01000014.1:1753..2899;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1759 1900 . - . ID=id-AFQR01000014.1:1759..1900;Dbxref=InterPro:IPR003952;Note=PatternScan:PS00504~frd_sdh_fad_binding~fumarate reductase/succinate dehydrogenase%2C fad-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1777 3517 . - . ID=id-AFQR01000014.1:1777..3517;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1789 1795 . - . ID=id-AFQR01000014.1:1789..1795;Dbxref=InterPro:IPR013027;Note=seg~FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1795 3193 . - . ID=id-AFQR01000014.1:1795..3193;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1798 2854 . - . ID=id-AFQR01000014.1:1798..2854;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 1927 2833 . - . ID=id-AFQR01000014.1:1927..2833;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 2083 3049 . - . ID=id-AFQR01000014.1:2083..3049;Dbxref=InterPro:IPR015939;Note=Gene3D:1.20.58.100~fumarate reductase/succinate dehydrogenase flavolike protein;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 2083 2479 . - . ID=id-AFQR01000014.1:2083..2479;Note=Gene3D:3.90.700.10;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 2110 3133 . - . ID=id-AFQR01000014.1:2110..3133;Dbxref=InterPro:IPR004112,PFAM:PF02910;Note=superfamily~succ_dh_flav_c~fumarate reductase/succinate dehydrogenase flavoprotein%3B label: Succ_DH_flav_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 2125 2452 . - . ID=id-AFQR01000014.1:2125..2452;Note=superfamily:SSF56425~succinate dehydrogenase/fumarate reductase flavoprotein%2C catalytic domain;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 2188 3106 . - . ID=id-AFQR01000014.1:2188..3106;Dbxref=InterPro:IPR015939;Note=superfamily:SSF46977~succinate dehydrogenase/fumarate reductase flavoprotein c-terminal domain~fumarate reductase/succinate dehydrogenase flavolike protein;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank gene 3563 4333 . + . ID=gene-GGE_0731;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank CDS 3563 4333 . + 0 ID=cds-EGT82451.1;Parent=gene-GGE_0731;Dbxref=GeneID:1169738,InterPro:IPR001041,InterPro:IPR004489,InterPro:IPR006058,InterPro:IPR009051,InterPro:IPR012285,InterPro:IPR012675,InterPro:IPR017896,InterPro:IPR017900,TIGRFAM:TIGR00384,NCBI_GP:EGT82451.1;Name=EGT82451.1;Ontology_term=GO:0055114,GO:0006099,GO:0009055,GO:0051536,GO:0016491;gbkey=CDS;gene=frdB;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,tricarboxylic acid cycle|0006099||;locus_tag=GGE_0731;product=Fumarate reductase iron-sulfur subunit;protein_id=EGT82451.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3563 4328 . + . ID=id-GGE_0731;Note=multi-dom%3B label: PRK12385;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3569 3878 . + . ID=id-GGE_0731-2;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3578 3869 . + . ID=id-GGE_0731-3;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3584 3836 . + . ID=id-GGE_0731-4;Dbxref=InterPro:IPR001041;Note=ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3590 4277 . + . ID=id-GGE_0731-5;Note=HMMPanther:PTHR11921~family not named;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3596 4253 . + . ID=id-GGE_0731-6;Dbxref=InterPro:IPR004489,TIGRFAM:TIGR00384;Note=dhsb: succinate dehydrogenase and fumarate r~succinate dehydrogenase/fumarate reductase iron-sulphur protein;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3884 3989 . + . ID=id-GGE_0731-7;Dbxref=InterPro:IPR009051;Note=superfamily:SSF46548~alpha-helical ferredoxin~alpha-helical ferredoxin;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3884 3977 . + . ID=id-GGE_0731-8;Dbxref=InterPro:IPR012285;Note=Gene3D:1.10.1060.10~fumarate reductase;gbkey=misc_feature;gene=frdB;locus_tag=GGE_0731 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3590 3737 . - . ID=id-AFQR01000014.1:3590..3737;Dbxref=InterPro:IPR006058;Note=PatternScan:PS00197~2fe2s_fer_1~2fe-2s ferredoxin%2C iron-sulphur binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3599 4043 . - . ID=id-AFQR01000014.1:3599..4043;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 3653 4016 . - . ID=id-AFQR01000014.1:3653..4016;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank gene 4344 4754 . + . ID=gene-GGE_0732;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank CDS 4344 4754 . + 0 ID=cds-EGT82452.1;Parent=gene-GGE_0732;Dbxref=GeneID:1169739,InterPro:IPR003510,PFAM:PF02300,NCBI_GP:EGT82452.1;Name=EGT82452.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||;locus_tag=GGE_0732;product=Fumarate reductase subunit C;protein_id=EGT82452.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4359 4740 . + . ID=id-GGE_0732;Note=superfamily:SSF81343~fumarate reductase respiratory complex transmembrane subunits;gbkey=misc_feature;gene=frdC;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4359 4734 . + . ID=id-GGE_0732-2;Dbxref=InterPro:IPR003510;Note=HAMAP:MF_00708~fumarate_red_c~fumarate reductase%2C subunit c;gbkey=misc_feature;gene=frdC;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4362 4737 . + . ID=id-GGE_0732-3;Dbxref=InterPro:IPR003510,PFAM:PF02300;Note=fumarate_red_c~fumarate reductase%2C subunit c~Gene3D:1.20.1300.10;gbkey=misc_feature;gene=frdC;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4368 4725 . + . ID=id-GGE_0732-4;Note=specific~superfamily%3B label: QFR_TypeD_subunitC;gbkey=misc_feature;gene=frdC;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4377 4716 . + . ID=id-GGE_0732-5;Dbxref=InterPro:IPR003510;Note=BlastProDom:PD015900~frdc_haein_p44892~fumarate reductase%2C subunit c;gbkey=misc_feature;gene=frdC;locus_tag=GGE_0732 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4401 4695 . - . ID=id-AFQR01000014.1:4401..4695;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4413 4566 . - . ID=id-AFQR01000014.1:4413..4566;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4413 4455 . - . ID=id-AFQR01000014.1:4413..4455;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank gene 4767 5111 . + . ID=gene-GGE_0733;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank CDS 4767 5111 . + 0 ID=cds-EGT82453.1;Parent=gene-GGE_0733;Dbxref=GeneID:166198770,InterPro:IPR003418,PFAM:PF02313,NCBI_GP:EGT82453.1;Name=EGT82453.1;Ontology_term=GO:0006106,GO:0016020;gbkey=CDS;gene=frdD;go_component=membrane|0016020||;go_process=fumarate metabolic process|0006106||;locus_tag=GGE_0733;product=Fumarate reductase subunit D;protein_id=EGT82453.1;transl_table=11 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4767 5109 . + . ID=id-GGE_0733;Dbxref=InterPro:IPR003418;Note=superfamily:SSF81343~fumarate reductase respiratory complex transmembrane subunits~Gene3D:1.20.1300.10~BlastProDom:PD015693~q4qm68_haei8_q4qm68~fumarate reductase%2C d subunit;gbkey=misc_feature;gene=frdD;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4773 5106 . + . ID=id-GGE_0733-2;Dbxref=InterPro:IPR003418;Note=HAMAP:MF_00709~fumarate_red_d~fumarate reductase%2C d subunit;gbkey=misc_feature;gene=frdD;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4776 5097 . + . ID=id-GGE_0733-3;Dbxref=InterPro:IPR003418,PFAM:PF02313;Note=fumarate_red_d~fumarate reductase%2C d subunit;gbkey=misc_feature;gene=frdD;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4782 5097 . + . ID=id-GGE_0733-4;Note=specific~superfamily%3B label: QFR_TypeD_subunitD;gbkey=misc_feature;gene=frdD;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4812 4836 . + . ID=id-GGE_0733-5;Note=transmembrane_regions;gbkey=misc_feature;gene=frdD;locus_tag=GGE_0733 GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4824 4848 . - . ID=id-AFQR01000014.1:4824..4848;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4836 5028 . - . ID=id-AFQR01000014.1:4836..5028;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000014.1 Genbank sequence_feature 4836 4917 . - . ID=id-AFQR01000014.1:4836..4917;Note=transmembrane_regions;gbkey=misc_feature ##sequence-region AFQR01000013.1 1 17170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000013.1 Genbank region 1 17170 . + . ID=AFQR01000013.1:1..17170;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000013.1 Genbank gene 510 1163 . - . ID=gene-GGE_0713;Name=tfoX;gbkey=Gene;gene=tfoX;gene_biotype=protein_coding;locus_tag=GGE_0713 GCA_000222085.2|AFQR01000013.1 Genbank CDS 510 1163 . - 0 ID=cds-EGT82462.1;Parent=gene-GGE_0713;Dbxref=InterPro:IPR007076,InterPro:IPR007077,PFAM:PF04993,PFAM:PF04994,NCBI_GP:EGT82462.1;Name=EGT82462.1;gbkey=CDS;gene=tfoX;locus_tag=GGE_0713;product=DNA transformation protein tfoX;protein_id=EGT82462.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 516 882 . - . ID=id-GGE_0713;Note=superfamily%3B label: TfoX_N superfamily;gbkey=misc_feature;gene=tfoX;locus_tag=GGE_0713 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 525 825 . - . ID=id-GGE_0713-2;Dbxref=InterPro:IPR007076;Note=Gene3D:3.30.1460.30~tfox;gbkey=misc_feature;gene=tfoX;locus_tag=GGE_0713 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 543 807 . - . ID=id-GGE_0713-3;Dbxref=InterPro:IPR007076,PFAM:PF04993;Note=tfox_n~tfox;gbkey=misc_feature;gene=tfoX;locus_tag=GGE_0713 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 741 879 . + . ID=id-AFQR01000013.1:741..879;Note=superfamily%3B label: TfoX_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 747 873 . + . ID=id-AFQR01000013.1:747..873;Dbxref=InterPro:IPR007077,PFAM:PF04994;Note=tfox_c~tfox;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 765 873 . + . ID=id-AFQR01000013.1:765..873;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 1551 2615 . + . ID=gene-GGE_0714;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank CDS 1551 2615 . + 0 ID=cds-EGT82463.1;Parent=gene-GGE_0714;Dbxref=GeneID:1172885,InterPro:IPR013765,InterPro:IPR020584,InterPro:IPR020587,InterPro:IPR020588,InterPro:IPR023400,PFAM:PF00154,TIGRFAM:TIGR02012,NCBI_GP:EGT82463.1;Name=EGT82463.1;Ontology_term=GO:0006259,GO:0006281,GO:0005524,GO:0003677,GO:0008094,GO:0003697;gbkey=CDS;gene=recA;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA-dependent ATPase activity|0008094||,single-stranded DNA binding|0003697||;go_process=DNA metabolic process|0006259||,DNA repair|0006281||;locus_tag=GGE_0714;product=Protein recA;protein_id=EGT82463.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1551 2535 . + . ID=id-GGE_0714;Note=multi-dom%3B label: recA;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1551 2358 . + . ID=id-GGE_0714-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1557 2397 . + . ID=id-GGE_0714-3;Dbxref=InterPro:IPR013765;Note=HMMPanther:PTHR22942:SF1~dna repair protein reca~dna recombination and repair protein reca~HMMPanther:PTHR22942~family not named;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1569 2529 . + . ID=id-GGE_0714-4;Dbxref=InterPro:IPR013765;Note=HAMAP:MF_00268~reca~dna recombination and repair protein reca;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1569 2520 . + . ID=id-GGE_0714-5;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1569 2514 . + . ID=id-GGE_0714-6;Dbxref=InterPro:IPR013765,TIGRFAM:TIGR02012;Note=tigrfam_reca: protein reca~dna recombination and repair protein reca;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1578 2511 . + . ID=id-GGE_0714-7;Dbxref=InterPro:IPR013765,PFAM:PF00154;Note=reca~dna recombination and repair protein reca;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1644 2271 . + . ID=id-GGE_0714-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1662 2043 . + . ID=id-GGE_0714-9;Dbxref=InterPro:IPR020588;Note=ProfileScan:PS50162~reca_2~dna recombination/repair protein reca/radb%2C atp-binding domain;gbkey=misc_feature;gene=recA;locus_tag=GGE_0714 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1569 1581 . - . ID=id-AFQR01000013.1:1569..1581;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1578 2196 . - . ID=id-AFQR01000013.1:1578..2196;Dbxref=InterPro:IPR020584;Note=PatternScan:PS00321~reca_1~dna recombination/repair protein reca%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1593 2574 . - . ID=id-AFQR01000013.1:1593..2574;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1605 2448 . - . ID=id-AFQR01000013.1:1605..2448;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1638 2187 . - . ID=id-AFQR01000013.1:1638..2187;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1641 2286 . - . ID=id-AFQR01000013.1:1641..2286;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1641 2052 . - . ID=id-AFQR01000013.1:1641..2052;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1641 1938 . - . ID=id-AFQR01000013.1:1641..1938;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1641 1836 . - . ID=id-AFQR01000013.1:1641..1836;Dbxref=InterPro:IPR013765;Note=FPrintScan:PR00142~reca~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1722 2364 . - . ID=id-AFQR01000013.1:1722..2364;Dbxref=InterPro:IPR023400;Note=Gene3D:3.30.250.10~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1731 2361 . - . ID=id-AFQR01000013.1:1731..2361;Dbxref=InterPro:IPR023400;Note=superfamily:SSF54752~reca protein domain~dna recombination and repair protein reca;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 1773 2154 . - . ID=id-AFQR01000013.1:1773..2154;Dbxref=InterPro:IPR020587;Note=ProfileScan:PS50163~reca_3~dna recombination/repair protein reca%2C monomer-monomer interface;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 2633 2642 . + . ID=id-AFQR01000013.1:2633..2642;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 2651 2660 . - . ID=id-AFQR01000013.1:2651..2660;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 2695 3153 . + . ID=gene-GGE_0715;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=GGE_0715 GCA_000222085.2|AFQR01000013.1 Genbank CDS 2695 3153 . + 0 ID=cds-EGT82464.1;Parent=gene-GGE_0715;Dbxref=GeneID:81336401,InterPro:IPR003783,PFAM:PF02631,NCBI_GP:EGT82464.1;Name=EGT82464.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||;locus_tag=GGE_0715;product=Regulatory protein recX;protein_id=EGT82464.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 2701 3145 . + . ID=id-GGE_0715;Dbxref=InterPro:IPR003783;Note=HAMAP:MF_01114~recx~regulatory protein recx;gbkey=misc_feature;gene=recX;locus_tag=GGE_0715 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 2704 3139 . + . ID=id-GGE_0715-2;Note=superfamily%3B label: RecX superfamily;gbkey=misc_feature;gene=recX;locus_tag=GGE_0715 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 2779 3052 . + . ID=id-GGE_0715-3;Dbxref=InterPro:IPR003783,PFAM:PF02631;Note=recx~regulatory protein recx;gbkey=misc_feature;gene=recX;locus_tag=GGE_0715 GCA_000222085.2|AFQR01000013.1 Genbank gene 3150 3536 . - . ID=gene-GGE_0716;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank CDS 3150 3536 . - 0 ID=cds-EGT82465.1;Parent=gene-GGE_0716;Dbxref=GeneID:166218172,InterPro:IPR003691,PFAM:PF02537,TIGRFAM:TIGR00494,NCBI_GP:EGT82465.1;Name=EGT82465.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||;locus_tag=GGE_0716;product=Protein CrcB;protein_id=EGT82465.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3150 3510 . - . ID=id-GGE_0716;Note=superfamily%3B label: CRCB superfamily;gbkey=misc_feature;gene=crcB;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3156 3510 . - . ID=id-GGE_0716-2;Dbxref=InterPro:IPR003691;Note=HAMAP:MF_00454~crbc~camphor resistance crcb protein;gbkey=misc_feature;gene=crcB;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3165 3498 . - . ID=id-GGE_0716-3;Dbxref=InterPro:IPR003691,TIGRFAM:TIGR00494;Note=crcb: crcb protein~camphor resistance crcb protein;gbkey=misc_feature;gene=crcB;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3165 3489 . - . ID=id-GGE_0716-4;Dbxref=InterPro:IPR003691,PFAM:PF02537;Note=crcb~camphor resistance crcb protein;gbkey=misc_feature;gene=crcB;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3165 3204 . - . ID=id-GGE_0716-5;Note=transmembrane_regions;gbkey=misc_feature;gene=crcB;locus_tag=GGE_0716 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3189 3273 . + . ID=id-AFQR01000013.1:3189..3273;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3216 3360 . + . ID=id-AFQR01000013.1:3216..3360;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3219 3444 . + . ID=id-AFQR01000013.1:3219..3444;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3219 3348 . + . ID=id-AFQR01000013.1:3219..3348;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3219 3246 . + . ID=id-AFQR01000013.1:3219..3246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 3536 4354 . - . ID=gene-GGE_0717;Name=GGE_0717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank CDS 3536 4354 . - 0 ID=cds-EGT82466.1;Parent=gene-GGE_0717;Dbxref=GeneID:1176317,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR013200,InterPro:IPR023214,PFAM:PF08282,TIGRFAM:TIGR00099,TIGRFAM:TIGR01484,NCBI_GP:EGT82466.1;Name=EGT82466.1;Note=HI_0597;Ontology_term=GO:0008152,GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||,hydrolase activity|0016787||;go_process=metabolic process|0008152||;locus_tag=GGE_0717;product=putative hAD-like domain-containing protein;protein_id=EGT82466.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3548 4331 . - . ID=id-GGE_0717;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3551 4328 . - . ID=id-GGE_0717-2;Note=multi-dom%3B label: PRK10976;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3557 4310 . - . ID=id-GGE_0717-3;Dbxref=InterPro:IPR000150,TIGRFAM:TIGR00099;Note=cof-subfamily: cof-like hydrolase~cof protein;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3557 4223 . - . ID=id-GGE_0717-4;Dbxref=InterPro:IPR006379,TIGRFAM:TIGR01484;Note=had-sf-iib: had hydrolase%2C family iib~had-superfamily hydrolase%2C subfamily iib;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3557 3572 . - . ID=id-GGE_0717-5;Dbxref=InterPro:IPR000150;Note=PatternScan:PS01228~cof_1~cof protein;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3563 4304 . - . ID=id-GGE_0717-6;Dbxref=InterPro:IPR013200,PFAM:PF08282;Note=hydrolase_3~had superfamily hydrolase-like%2C type 3;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3563 4217 . - . ID=id-GGE_0717-7;Note=HMMPanther:PTHR10000~phosphoserine phosphatase;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3563 3755 . - . ID=id-GGE_0717-8;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3797 3839 . - . ID=id-GGE_0717-9;Note=Gene3D:3.30.1240.10;gbkey=misc_feature;locus_tag=GGE_0717 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3773 4100 . + . ID=id-AFQR01000013.1:3773..4100;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 3860 3896 . + . ID=id-AFQR01000013.1:3860..3896;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4447 4456 . - . ID=id-AFQR01000013.1:4447..4456;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 4466 5488 . - . ID=gene-GGE_0718;Name=GGE_0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank CDS 4466 5488 . - 0 ID=cds-EGT82467.1;Parent=gene-GGE_0718;Dbxref=GeneID:52424347,InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001834,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012675,InterPro:IPR017927,InterPro:IPR017938,PFAM:PF00111,PFAM:PF00175,PFAM:PF00970,NCBI_GP:EGT82467.1;Name=EGT82467.1;Note=YP_087484;Ontology_term=GO:0055114,GO:0009055,GO:0051536,GO:0016491;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0718;product=HCP oxidoreductase%2C NADH-dependent;protein_id=EGT82467.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4466 5210 . - . ID=id-GGE_0718;Note=HMMPanther:PTHR19370:SF35~subfamily not named~HMMPanther:PTHR19370~family not named;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4466 4778 . - . ID=id-GGE_0718-2;Dbxref=InterPro:IPR017938;Note=superfamily:SSF63380~riboflavin synthase domain-like~riboflavin synthase-like beta-barrel;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4478 5465 . - . ID=id-GGE_0718-3;Note=multi-dom%3B label: PRK10684;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4490 4769 . - . ID=id-GGE_0718-4;Dbxref=InterPro:IPR017927;Note=ProfileScan:PS51384~fad_fr~ferredoxin reductase-type fad-binding domain;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4502 4724 . - . ID=id-GGE_0718-5;Note=Gene3D:2.40.30.10;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4505 5144 . - . ID=id-GGE_0718-6;Note=specific~superfamily%3B label: FNR_iron_sulfur_binding_1;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4505 4748 . - . ID=id-GGE_0718-7;Dbxref=InterPro:IPR008333,PFAM:PF00970;Note=fad_binding_6~oxidoreductase%2C fad-binding domain;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4751 4892 . - . ID=id-GGE_0718-8;Note=superfamily:SSF52343~ferredoxin reductase-like nadp-linked domain;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4760 4871 . - . ID=id-GGE_0718-9;Note=Gene3D:3.40.50.80;gbkey=misc_feature;locus_tag=GGE_0718 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4490 4634 . + . ID=id-AFQR01000013.1:4490..4634;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4493 5330 . + . ID=id-AFQR01000013.1:4493..5330;Dbxref=InterPro:IPR006058;Note=PatternScan:PS00197~2fe2s_fer_1~2fe-2s ferredoxin%2C iron-sulphur binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4493 5084 . + . ID=id-AFQR01000013.1:4493..5084;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4511 4745 . + . ID=id-AFQR01000013.1:4511..4745;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4526 4814 . + . ID=id-AFQR01000013.1:4526..4814;Dbxref=InterPro:IPR001834;Note=FPrintScan:PR00406~cytb5rdtase~nadh cytochrome b5 reductase (cbr);gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4685 5243 . + . ID=id-AFQR01000013.1:4685..5243;Dbxref=InterPro:IPR001041,PFAM:PF00111;Note=fer2~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4709 5237 . + . ID=id-AFQR01000013.1:4709..5237;Note=specific~superfamily%3B label: fer2;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4736 5219 . + . ID=id-AFQR01000013.1:4736..5219;Dbxref=InterPro:IPR001041;Note=ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4775 4817 . + . ID=id-AFQR01000013.1:4775..4817;Dbxref=InterPro:IPR001433,PFAM:PF00175;Note=nad_binding_1~oxidoreductase fad/nad(p)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4781 5165 . + . ID=id-AFQR01000013.1:4781..5165;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 4799 5150 . + . ID=id-AFQR01000013.1:4799..5150;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5513 5522 . + . ID=id-AFQR01000013.1:5513..5522;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5570 5579 . - . ID=id-AFQR01000013.1:5570..5579;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 5592 7244 . - . ID=gene-GGE_0719;Name=GGE_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank CDS 5592 7244 . - 0 ID=cds-EGT82468.1;Parent=gene-GGE_0719;Dbxref=GeneID:261345679,InterPro:IPR004137,InterPro:IPR010048,InterPro:IPR011254,InterPro:IPR016099,InterPro:IPR016100,PFAM:PF03063,PIR:PIRSF000076,TIGRFAM:TIGR01703,NCBI_GP:EGT82468.1;Name=EGT82468.1;Note=ZP_05973323;Ontology_term=GO:0055114,GO:0005737,GO:0003824,GO:0051536,GO:0016661,GO:0016491;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,oxidoreductase activity acting on other nitrogenous compounds as donors|0016661||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0719;product=hydroxylamine reductase;protein_id=EGT82468.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5592 7242 . - . ID=id-GGE_0719;Dbxref=InterPro:IPR010048,PIR:PIRSF000076;Note=hydroxylamine reductase~hybrid cluster protein;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5592 7239 . - . ID=id-GGE_0719-2;Dbxref=InterPro:IPR010048,InterPro:IPR011254;Note=superfamily:SSF56821~prismane like protein~prismane-like~HAMAP:MF_00069~hydroxylam_reduct~hybrid cluster protein;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5592 7236 . - . ID=id-GGE_0719-3;Dbxref=InterPro:IPR010048,TIGRFAM:TIGR01703;Note=multi-dom~hybrid_clust: hydroxylamine reductase~hybrid cluster protein%3B label: PRK05290;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5592 7233 . - . ID=id-GGE_0719-4;Dbxref=InterPro:IPR004137,PFAM:PF03063;Note=prismane~prismane;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5592 5856 . - . ID=id-GGE_0719-5;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5691 5814 . - . ID=id-GGE_0719-6;Dbxref=InterPro:IPR016100;Note=Gene3D:1.20.1270.20~prismane%2C alpha-bundle;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 6063 6768 . - . ID=id-GGE_0719-7;Note=specific~superfamily%3B label: HCP;gbkey=misc_feature;locus_tag=GGE_0719 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5727 5904 . + . ID=id-AFQR01000013.1:5727..5904;Note=superfamily%3B label: ribokinase_pfkB_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 5835 6045 . + . ID=id-AFQR01000013.1:5835..6045;Dbxref=InterPro:IPR016100;Note=Gene3D:1.20.1270.20~prismane%2C alpha-bundle;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 6030 6294 . + . ID=id-AFQR01000013.1:6030..6294;Dbxref=InterPro:IPR016099;Note=Gene3D:3.40.50.2030~prismane-like%2C alpha/beta-sandwich;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 6093 6732 . + . ID=id-AFQR01000013.1:6093..6732;Dbxref=InterPro:IPR016099;Note=Gene3D:3.40.50.2030~prismane-like%2C alpha/beta-sandwich;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 6816 6825 . + . ID=id-AFQR01000013.1:6816..6825;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 7607 8611 . + . ID=gene-GGE_0720;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank CDS 7607 8611 . + 0 ID=cds-EGT82469.1;Parent=gene-GGE_0720;Dbxref=GeneID:166918655,InterPro:IPR002292,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,PFAM:PF00185,PFAM:PF02729,TIGRFAM:TIGR00658,NCBI_GP:EGT82469.1;Name=EGT82469.1;Ontology_term=GO:0006520,GO:0009348,GO:0016597,GO:0016743,GO:0004585;gbkey=CDS;gene=arcB;go_component=ornithine carbamoyltransferase complex|0009348||;go_function=amino acid binding|0016597||,carboxyl- or carbamoyltransferase activity|0016743||,ornithine carbamoyltransferase activity|0004585||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_0720;product=Ornithine carbamoyltransferase;protein_id=EGT82469.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7607 8609 . + . ID=id-GGE_0720;Note=multi-dom%3B label: PRK01713;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7607 8606 . + . ID=id-GGE_0720-2;Note=HMMPanther:PTHR11405:SF1~ornithine carbamoyltransferase~HMMPanther:PTHR11405~family not named;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7613 8603 . + . ID=id-GGE_0720-3;Dbxref=InterPro:IPR006130;Note=superfamily:SSF53671~aspartate/ornithine carbamoyltransferase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7622 8027 . + . ID=id-GGE_0720-4;Note=Gene3D:3.40.50.1370;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7628 8591 . + . ID=id-GGE_0720-5;Dbxref=InterPro:IPR002292;Note=HAMAP:MF_01109~otcase~ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7631 8588 . + . ID=id-GGE_0720-6;Dbxref=InterPro:IPR002292,TIGRFAM:TIGR00658;Note=orni_carb_tr: ornithine carbamoyltransfe~ornithine carbamoyltransferase;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7631 8033 . + . ID=id-GGE_0720-7;Dbxref=InterPro:IPR006132,PFAM:PF02729;Note=superfamily~otcace_n~aspartate/ornithine carbamoyltransferase%2C carbamoyl-p binding%3B label: OTCace_N superfamily;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 8042 8135 . + . ID=id-GGE_0720-8;Note=Gene3D:3.40.50.1370;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 8078 8132 . + . ID=id-GGE_0720-9;Dbxref=InterPro:IPR006131,PFAM:PF00185;Note=otcace~aspartate/ornithine carbamoyltransferase%2C asp/orn-binding domain;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 8087 8123 . + . ID=id-GGE_0720-10;Note=superfamily%3B label: OTCace superfamily;gbkey=misc_feature;gene=arcB;locus_tag=GGE_0720 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7631 7766 . - . ID=id-AFQR01000013.1:7631..7766;Dbxref=InterPro:IPR006130;Note=PatternScan:PS00097~carbamoyltransferase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7637 8408 . - . ID=id-AFQR01000013.1:7637..8408;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7640 8294 . - . ID=id-AFQR01000013.1:7640..8294;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7643 8543 . - . ID=id-AFQR01000013.1:7643..8543;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7643 8012 . - . ID=id-AFQR01000013.1:7643..8012;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7649 7859 . - . ID=id-AFQR01000013.1:7649..7859;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7652 7979 . - . ID=id-AFQR01000013.1:7652..7979;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7652 7760 . - . ID=id-AFQR01000013.1:7652..7760;Dbxref=InterPro:IPR002292;Note=FPrintScan:PR00102~otcase~ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7667 7766 . - . ID=id-AFQR01000013.1:7667..7766;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 7679 8501 . - . ID=id-AFQR01000013.1:7679..8501;Dbxref=InterPro:IPR006130;Note=FPrintScan:PR00100~aotcase~aspartate/ornithine carbamoyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 8822 9016 . + . ID=gene-GGE_0721;Name=GGE_0721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0721 GCA_000222085.2|AFQR01000013.1 Genbank CDS 8822 9016 . + 0 ID=cds-EGT82470.1;Parent=gene-GGE_0721;Dbxref=GeneID:1175269,InterPro:IPR021237,PFAM:PF10940,NCBI_GP:EGT82470.1;Name=EGT82470.1;Note=HI_0592;gbkey=CDS;locus_tag=GGE_0721;product=hypothetical protein;protein_id=EGT82470.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 8897 8942 . + . ID=id-GGE_0721;Dbxref=InterPro:IPR021237,PFAM:PF10940;Note=superfamily~duf2618~protein of unknown function duf2618%3B label: DUF2618 superfamily;gbkey=misc_feature;locus_tag=GGE_0721 GCA_000222085.2|AFQR01000013.1 Genbank gene 9267 11429 . + . ID=gene-GGE_0722;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank CDS 9267 11429 . + 0 ID=cds-EGT82471.1;Parent=gene-GGE_0722;Dbxref=GeneID:1169250,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF01276,PFAM:PF03709,PFAM:PF03711,PIR:PIRSF009393,NCBI_GP:EGT82471.1;Name=EGT82471.1;Ontology_term=GO:0006520,GO:0005737,GO:0016831,GO:0003824,GO:0030170;gbkey=CDS;gene=speF;go_component=cytoplasm|0005737||;go_function=carboxy-lyase activity|0016831||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_0722;product=Ornithine decarboxylase;protein_id=EGT82471.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9267 11424 . + . ID=id-GGE_0722;Dbxref=InterPro:IPR011193,PIR:PIRSF009393;Note=multi-dom~ornithine/lysine/arginine decarboxylase~ornithine/lysine/arginine decarboxylase%3B label: PRK13578;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9267 9588 . + . ID=id-GGE_0722-2;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily~Gene3D:3.40.50.220;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9279 9564 . + . ID=id-GGE_0722-3;Dbxref=InterPro:IPR005308,PFAM:PF03709;Note=superfamily~okr_dc_1_n~orn/lys/arg decarboxylase%3B label: OKR_DC_1_N superfamily;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9591 10650 . + . ID=id-GGE_0722-4;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9591 10593 . + . ID=id-GGE_0722-5;Dbxref=InterPro:IPR000310,PFAM:PF01276;Note=okr_dc_1~orn/lys/arg decarboxylase%2C major domain;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9591 10200 . + . ID=id-GGE_0722-6;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9594 10245 . + . ID=id-GGE_0722-7;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=speF;locus_tag=GGE_0722 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9312 10314 . - . ID=id-AFQR01000013.1:9312..10314;Dbxref=InterPro:IPR000310;Note=PatternScan:PS00703~okr_dc_1~orn/lys/arg decarboxylase%2C major domain;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9462 9798 . - . ID=id-AFQR01000013.1:9462..9798;Note=HMMPanther:PTHR11751:SF131~uncharacterized protein yaao~HMMPanther:PTHR11751~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9645 11046 . - . ID=id-AFQR01000013.1:9645..11046;Dbxref=InterPro:IPR008286;Note=Gene3D:3.90.100.10~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9663 10992 . - . ID=id-AFQR01000013.1:9663..10992;Dbxref=InterPro:IPR008286,PFAM:PF03711;Note=okr_dc_1_c~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9669 10992 . - . ID=id-AFQR01000013.1:9669..10992;Note=superfamily%3B label: OKR_DC_1_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9717 10974 . - . ID=id-AFQR01000013.1:9717..10974;Dbxref=InterPro:IPR008286;Note=superfamily:SSF55904~ornithine decarboxylase c-terminal domain~orn/lys/arg decarboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 9786 10527 . - . ID=id-AFQR01000013.1:9786..10527;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11481 11490 . + . ID=id-AFQR01000013.1:11481..11490;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 11536 12855 . + . ID=gene-GGE_0723;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank CDS 11536 12855 . + 0 ID=cds-EGT82472.1;Parent=gene-GGE_0723;Dbxref=GeneID:1172565,InterPro:IPR002293,InterPro:IPR004754,InterPro:IPR004841,PFAM:PF00324,PIR:PIRSF006060,TIGRFAM:TIGR00905,NCBI_GP:EGT82472.1;Name=EGT82472.1;Ontology_term=GO:0006865,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0015171;gbkey=CDS;gene=potE;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=amino acid transmembrane transporter activity|0015171||;go_process=amino acid transport|0006865||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0723;product=Putrescine-ornithine antiporter;protein_id=EGT82472.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11536 12853 . + . ID=id-GGE_0723;Dbxref=InterPro:IPR002293,PIR:PIRSF006060;Note=amino acid transporter~amino acid/polyamine transporter i;gbkey=misc_feature;gene=potE;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11536 12850 . + . ID=id-GGE_0723-2;Dbxref=InterPro:IPR004754,TIGRFAM:TIGR00905;Note=superfamily~multi-dom~2a0302: transporter%2C basic amino acid/polyam~amino acid antiporter%3B label: Aa_trans superfamily;gbkey=misc_feature;gene=potE;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11542 12805 . + . ID=id-GGE_0723-3;Dbxref=InterPro:IPR002293;Note=HMMPanther:PTHR11785:SF107~subfamily not named~HMMPanther:PTHR11785~family not named~amino acid/polyamine transporter i;gbkey=misc_feature;gene=potE;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11563 11605 . + . ID=id-GGE_0723-4;Note=transmembrane_regions;gbkey=misc_feature;gene=potE;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11587 12700 . + . ID=id-GGE_0723-5;Dbxref=InterPro:IPR004841,PFAM:PF00324;Note=aa_permease~amino acid permease domain;gbkey=misc_feature;gene=potE;locus_tag=GGE_0723 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11572 11722 . - . ID=id-AFQR01000013.1:11572..11722;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11581 11995 . - . ID=id-AFQR01000013.1:11581..11995;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11590 12697 . - . ID=id-AFQR01000013.1:11590..12697;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12763 . - . ID=id-AFQR01000013.1:11605..12763;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12592 . - . ID=id-AFQR01000013.1:11605..12592;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12496 . - . ID=id-AFQR01000013.1:11605..12496;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12349 . - . ID=id-AFQR01000013.1:11605..12349;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12214 . - . ID=id-AFQR01000013.1:11605..12214;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 12085 . - . ID=id-AFQR01000013.1:11605..12085;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 11974 . - . ID=id-AFQR01000013.1:11605..11974;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 11887 . - . ID=id-AFQR01000013.1:11605..11887;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 11791 . - . ID=id-AFQR01000013.1:11605..11791;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 11605 11644 . - . ID=id-AFQR01000013.1:11605..11644;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 12957 13157 . - . ID=gene-GGE_0724;Name=GGE_0724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0724 GCA_000222085.2|AFQR01000013.1 Genbank CDS 12957 13157 . - 0 ID=cds-EGT82473.1;Parent=gene-GGE_0724;Dbxref=GeneID:301169305,InterPro:IPR007359,PFAM:PF04246,NCBI_GP:EGT82473.1;Name=EGT82473.1;Note=CBW28903;gbkey=CDS;locus_tag=GGE_0724;product=putative positive regulator of the sigmaE transcription factor;protein_id=EGT82473.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13005 13110 . - . ID=id-GGE_0724;Note=superfamily%3B label: RseC_MucC superfamily;gbkey=misc_feature;locus_tag=GGE_0724 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13005 13107 . - . ID=id-GGE_0724-2;Dbxref=InterPro:IPR007359,PFAM:PF04246;Note=rsec_mucc~positive regulator of sigma(e)%2C rsec/mucc;gbkey=misc_feature;locus_tag=GGE_0724 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13011 13038 . + . ID=id-AFQR01000013.1:13011..13038;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13039 13048 . + . ID=id-AFQR01000013.1:13039..13048;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 13280 13984 . + . ID=gene-GGE_0725;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank CDS 13280 13984 . + 0 ID=cds-EGT82474.1;Parent=gene-GGE_0725;Dbxref=GeneID:81336395,InterPro:IPR005320,InterPro:IPR023172,PFAM:PF03575,NCBI_GP:EGT82474.1;Name=EGT82474.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||;go_process=proteolysis|0006508||;locus_tag=GGE_0725;product=Peptidase E;protein_id=EGT82474.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13280 13979 . + . ID=id-GGE_0725;Note=superfamily:SSF52317~class i glutamine amidotransferase-like;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13280 13916 . + . ID=id-GGE_0725-2;Note=HMMPanther:PTHR20842~family not named;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13286 13967 . + . ID=id-GGE_0725-3;Note=Gene3D:3.40.50.880;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13286 13931 . + . ID=id-GGE_0725-4;Dbxref=InterPro:IPR023172;Note=HAMAP:MF_00510~peptidase_e~peptidase s51%2C dipeptidase e;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13289 13925 . + . ID=id-GGE_0725-5;Note=specific~superfamily%3B label: GAT1_Peptidase_E;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 13436 13739 . + . ID=id-GGE_0725-6;Dbxref=InterPro:IPR005320,PFAM:PF03575;Note=peptidase_s51~peptidase s51;gbkey=misc_feature;gene=pepE;locus_tag=GGE_0725 GCA_000222085.2|AFQR01000013.1 Genbank gene 14002 15297 . + . ID=gene-GGE_0726;Name=GGE_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0726 GCA_000222085.2|AFQR01000013.1 Genbank CDS 14002 15297 . + 0 ID=cds-EGT82475.1;Parent=gene-GGE_0726;Dbxref=GeneID:229847402,InterPro:IPR004669,InterPro:IPR018385,PFAM:PF03606,TIGRFAM:TIGR00771,NCBI_GP:EGT82475.1;Name=EGT82475.1;Note=ZP_04467502;Ontology_term=GO:0015740,GO:0016021,GO:0015556;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||;go_process=C4-dicarboxylate transport|0015740||;locus_tag=GGE_0726;product=Putative C4-dicarboxylate transporter;protein_id=EGT82475.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14014 14056 . + . ID=id-GGE_0726;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0726 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14017 15283 . + . ID=id-GGE_0726-2;Note=superfamily%3B label: DcuC superfamily;gbkey=misc_feature;locus_tag=GGE_0726 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14143 15136 . + . ID=id-GGE_0726-3;Dbxref=InterPro:IPR004669,TIGRFAM:TIGR00771;Note=dcuc: transporter%2C anaerobic c4-dicarboxylat~c4-dicarboxylate anaerobic carrier;gbkey=misc_feature;locus_tag=GGE_0726 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14161 15130 . + . ID=id-GGE_0726-4;Dbxref=InterPro:IPR018385,PFAM:PF03606;Note=dcuc~c4-dicarboxylate anaerobic carrier-like;gbkey=misc_feature;locus_tag=GGE_0726 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14029 15139 . - . ID=id-AFQR01000013.1:14029..15139;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14032 14350 . - . ID=id-AFQR01000013.1:14032..14350;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14047 15250 . - . ID=id-AFQR01000013.1:14047..15250;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14050 14689 . - . ID=id-AFQR01000013.1:14050..14689;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14062 14998 . - . ID=id-AFQR01000013.1:14062..14998;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 15154 . - . ID=id-AFQR01000013.1:14071..15154;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14887 . - . ID=id-AFQR01000013.1:14071..14887;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14782 . - . ID=id-AFQR01000013.1:14071..14782;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14671 . - . ID=id-AFQR01000013.1:14071..14671;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14542 . - . ID=id-AFQR01000013.1:14071..14542;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14290 . - . ID=id-AFQR01000013.1:14071..14290;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14164 . - . ID=id-AFQR01000013.1:14071..14164;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 14071 14086 . - . ID=id-AFQR01000013.1:14071..14086;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15326 15335 . + . ID=id-AFQR01000013.1:15326..15335;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank gene 15368 16639 . + . ID=gene-GGE_0727;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank CDS 15368 16639 . + 0 ID=cds-EGT82476.1;Parent=gene-GGE_0727;Dbxref=GeneID:1175265,InterPro:IPR002933,InterPro:IPR010168,InterPro:IPR011650,InterPro:IPR017439,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF005962,TIGRFAM:TIGR01891,NCBI_GP:EGT82476.1;Name=EGT82476.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=abgA;go_function=hydrolase activity|0016787||;go_process=metabolic process|0008152||;locus_tag=GGE_0727;product=Aminobenzoyl-glutamate utilization protein A;protein_id=EGT82476.1;transl_table=11 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15368 16637 . + . ID=id-GGE_0727;Dbxref=InterPro:IPR017439,PIR:PIRSF005962;Note=multi-dom~metal-dependent amidase/aminoacylase/carboxypeptidase~peptidase m20d%2C mername-aa028/carboxypeptidase ss1%3B label: AbgB;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15380 16625 . + . ID=id-GGE_0727-2;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15389 16613 . + . ID=id-GGE_0727-3;Note=HMMPanther:PTHR11014:SF44~n-acyl-l-amino acid amidohydrolase~HMMPanther:PTHR11014~family not named;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15392 16577 . + . ID=id-GGE_0727-4;Dbxref=InterPro:IPR010168,TIGRFAM:TIGR01891;Note=amidohydrolase: amidohydrolase~peptidase m20d%2C amidohydrolase;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15632 16028 . + . ID=id-GGE_0727-5;Note=superfamily%3B label: M20_dimer superfamily;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15680 16316 . + . ID=id-GGE_0727-6;Dbxref=InterPro:IPR002933,PFAM:PF01546;Note=peptidase_m20~peptidase m20;gbkey=misc_feature;gene=abgA;locus_tag=GGE_0727 GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15404 16382 . - . ID=id-AFQR01000013.1:15404..16382;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15632 16040 . - . ID=id-AFQR01000013.1:15632..16040;Dbxref=InterPro:IPR011650,PFAM:PF07687;Note=m20_dimer~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15650 16355 . - . ID=id-AFQR01000013.1:15650..16355;Note=Gene3D:3.40.630.10;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15686 16031 . - . ID=id-AFQR01000013.1:15686..16031;Note=Gene3D:3.30.70.360;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 15713 16022 . - . ID=id-AFQR01000013.1:15713..16022;Dbxref=InterPro:IPR011650;Note=superfamily:SSF55031~bacterial exopeptidase dimerization domain~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 16762 16768 . - . ID=id-AFQR01000013.1:16762..16768;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000013.1 Genbank sequence_feature 17027 17036 . + . ID=id-AFQR01000013.1:17027..17036;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000012.1 1 83956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000012.1 Genbank region 1 83956 . + . ID=AFQR01000012.1:1..83956;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1 551 . + . ID=id-GeneID:1841333-6;Dbxref=GeneID:1841333;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 566 1552 . + . ID=gene-GGE_0621;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank CDS 566 1552 . + 0 ID=cds-EGT82523.1;Parent=gene-GGE_0621;Dbxref=GeneID:6226713,InterPro:IPR000728,InterPro:IPR006283,InterPro:IPR010918,InterPro:IPR016188,PFAM:PF00586,PFAM:PF02769,PIR:PIRSF005303,TIGRFAM:TIGR01379,NCBI_GP:EGT82523.1;Name=EGT82523.1;Ontology_term=GO:0009228,GO:0003824,GO:0009030;gbkey=CDS;gene=thiL;go_function=catalytic activity|0003824||,thiamine-phosphate kinase activity|0009030||;go_process=thiamine biosynthetic process|0009228||;locus_tag=GGE_0621;product=Thiamine-monophosphate kinase;protein_id=EGT82523.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 566 1541 . + . ID=id-GGE_0621;Dbxref=InterPro:IPR006283,PIR:PIRSF005303;Note=thiamine monophosphate kinase~thiamine-monophosphate kinase;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 575 983 . + . ID=id-GGE_0621-2;Note=Gene3D:3.30.1330.10;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 575 977 . + . ID=id-GGE_0621-3;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 578 1529 . + . ID=id-GGE_0621-4;Dbxref=InterPro:IPR006283,TIGRFAM:TIGR01379;Note=multi-dom~thil: thiamine-monophosphate kinase~thiamine-monophosphate kinase%3B label: thiL;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 578 1442 . + . ID=id-GGE_0621-5;Note=specific~superfamily%3B label: PurM-like superfamily;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 650 854 . + . ID=id-GGE_0621-6;Dbxref=InterPro:IPR000728,PFAM:PF00586;Note=airs~air synthase-related protein;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 992 1079 . + . ID=id-GGE_0621-7;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1001 1106 . + . ID=id-GGE_0621-8;Note=Gene3D:3.90.650.10;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1088 1097 . + . ID=id-GGE_0621-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=thiL;locus_tag=GGE_0621 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1013 1016 . - . ID=id-AFQR01000012.1:1013..1016;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 1549 2040 . + . ID=gene-GGE_0622;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=GGE_0622 GCA_000222085.2|AFQR01000012.1 Genbank CDS 1549 2040 . + 0 ID=cds-EGT82524.1;Parent=gene-GGE_0622;Dbxref=GeneID:1175729,InterPro:IPR007686,PFAM:PF04608,NCBI_GP:EGT82524.1;Name=EGT82524.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||;go_process=lipid metabolic process|0006629||;locus_tag=GGE_0622;product=Phosphatidylglycerophosphatase A;protein_id=EGT82524.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1576 2008 . + . ID=id-GGE_0622;Dbxref=InterPro:IPR007686;Note=superfamily:SSF101307~yutg-like~phosphatidylglycerophosphatase a;gbkey=misc_feature;gene=pgpA;locus_tag=GGE_0622 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1585 1609 . + . ID=id-GGE_0622-2;Note=transmembrane_regions;gbkey=misc_feature;gene=pgpA;locus_tag=GGE_0622 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1597 1927 . + . ID=id-GGE_0622-3;Note=specific~superfamily%3B label: PgpA;gbkey=misc_feature;gene=pgpA;locus_tag=GGE_0622 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1600 1975 . + . ID=id-GGE_0622-4;Dbxref=InterPro:IPR007686,PFAM:PF04608;Note=pgpa~phosphatidylglycerophosphatase a;gbkey=misc_feature;gene=pgpA;locus_tag=GGE_0622 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1585 1675 . - . ID=id-AFQR01000012.1:1585..1675;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1600 1975 . - . ID=id-AFQR01000012.1:1600..1975;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1618 1957 . - . ID=id-AFQR01000012.1:1618..1957;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1618 1831 . - . ID=id-AFQR01000012.1:1618..1831;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1618 1687 . - . ID=id-AFQR01000012.1:1618..1687;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 1725 1734 . - . ID=id-AFQR01000012.1:1725..1734;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 2040 2666 . + . ID=gene-GGE_0623;Name=GGE_0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0623 GCA_000222085.2|AFQR01000012.1 Genbank CDS 2040 2666 . + 0 ID=cds-EGT82525.1;Parent=gene-GGE_0623;Dbxref=GeneID:2495691,InterPro:IPR001123,InterPro:IPR004778,PFAM:PF01810,TIGRFAM:TIGR00949,NCBI_GP:EGT82525.1;Name=EGT82525.1;Note=HI_1307;Ontology_term=GO:0006865,GO:0016021,GO:0016020;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_process=amino acid transport|0006865||;locus_tag=GGE_0623;product=putative homoserine/Threonine efflux protein;protein_id=EGT82525.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2052 2100 . + . ID=id-GGE_0623;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0623 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2067 2622 . + . ID=id-GGE_0623-2;Dbxref=InterPro:IPR001123,PFAM:PF01810;Note=lyse~lysine-type exporter protein (lyse/ygga);gbkey=misc_feature;locus_tag=GGE_0623 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2082 2595 . + . ID=id-GGE_0623-3;Dbxref=InterPro:IPR004778,TIGRFAM:TIGR00949;Note=superfamily~2a76: homoserine/threonine efflux protein~homoserine/threonine efflux protein%3B label: LysE superfamily;gbkey=misc_feature;locus_tag=GGE_0623 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2109 2583 . - . ID=id-AFQR01000012.1:2109..2583;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2109 2478 . - . ID=id-AFQR01000012.1:2109..2478;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2109 2382 . - . ID=id-AFQR01000012.1:2109..2382;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2109 2226 . - . ID=id-AFQR01000012.1:2109..2226;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2109 2145 . - . ID=id-AFQR01000012.1:2109..2145;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 2683 3495 . + . ID=gene-GGE_0624;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank CDS 2683 3495 . + 0 ID=cds-EGT82526.1;Parent=gene-GGE_0624;Dbxref=GeneID:166222638,InterPro:IPR000846,InterPro:IPR011770,InterPro:IPR016040,InterPro:IPR022663,InterPro:IPR022664,PFAM:PF01113,PFAM:PF05173,TIGRFAM:TIGR00036,NCBI_GP:EGT82526.1;Name=EGT82526.1;Ontology_term=GO:0009089,GO:0008152,GO:0055114,GO:0005737,GO:0005488,GO:0003824,GO:0008839;gbkey=CDS;gene=dapB;go_component=cytoplasm|0005737||;go_function=binding|0005488||,catalytic activity|0003824||,dihydrodipicolinate reductase activity|0008839||;go_process=lysine biosynthetic process via diaminopimelate|0009089||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0624;product=Dihydrodipicolinate reductase;protein_id=EGT82526.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2683 3493 . + . ID=id-GGE_0624;Dbxref=InterPro:IPR011770;Note=HMMPanther:PTHR20836~family not named~dihydrodipicolinate reductase%2C bacterial/plant;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2689 3490 . + . ID=id-GGE_0624-2;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2689 3484 . + . ID=id-GGE_0624-3;Dbxref=InterPro:IPR011770,TIGRFAM:TIGR00036;Note=dapb: dihydrodipicolinate reductase~dihydrodipicolinate reductase%2C bacterial/plant;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2689 3478 . + . ID=id-GGE_0624-4;Note=multi-dom%3B label: dapB;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2689 3106 . + . ID=id-GGE_0624-5;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2692 3475 . + . ID=id-GGE_0624-6;Dbxref=InterPro:IPR011770;Note=HAMAP:MF_00102~dapb~dihydrodipicolinate reductase%2C bacterial/plant;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2695 3052 . + . ID=id-GGE_0624-7;Dbxref=InterPro:IPR000846,PFAM:PF01113;Note=dapb_n~dihydrodipicolinate reductase;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2698 2707 . + . ID=id-GGE_0624-8;Note=seg;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2722 3025 . + . ID=id-GGE_0624-9;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3070 3094 . + . ID=id-GGE_0624-10;Dbxref=InterPro:IPR022663,PFAM:PF05173;Note=superfamily~dapb_c~dihydrodipicolinate reductase%3B label: DapB_C superfamily;gbkey=misc_feature;gene=dapB;locus_tag=GGE_0624 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2737 3136 . - . ID=id-AFQR01000012.1:2737..3136;Dbxref=InterPro:IPR022664;Note=PatternScan:PS01298~dapb~dihydrodipicolinate reductase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 2962 3112 . - . ID=id-AFQR01000012.1:2962..3112;Note=Gene3D:3.30.360.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3013 3067 . - . ID=id-AFQR01000012.1:3013..3067;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3180 3189 . - . ID=id-AFQR01000012.1:3180..3189;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 3490 3768 . - . ID=gene-GGE_0625;Name=GGE_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0625 GCA_000222085.2|AFQR01000012.1 Genbank CDS 3490 3768 . - 0 ID=cds-EGT82527.1;Parent=gene-GGE_0625;Dbxref=GeneID:1175918,InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR012675,PFAM:PF00111,NCBI_GP:EGT82527.1;Name=EGT82527.1;Note=HI_1309;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_0625;product=putative ferredoxin;protein_id=EGT82527.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3520 3736 . - . ID=id-GGE_0625;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature;locus_tag=GGE_0625 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3523 3736 . - . ID=id-GGE_0625-2;Dbxref=InterPro:IPR001041,InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type~ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature;locus_tag=GGE_0625 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3523 3733 . - . ID=id-GGE_0625-3;Note=specific~superfamily%3B label: fer2;gbkey=misc_feature;locus_tag=GGE_0625 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3547 3688 . - . ID=id-GGE_0625-4;Dbxref=InterPro:IPR001041,PFAM:PF00111;Note=fer2~ferredoxin;gbkey=misc_feature;locus_tag=GGE_0625 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3517 3625 . + . ID=id-AFQR01000012.1:3517..3625;Dbxref=InterPro:IPR006058;Note=PatternScan:PS00197~2fe2s_fer_1~2fe-2s ferredoxin%2C iron-sulphur binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 3727 4464 . + . ID=gene-GGE_0626;Name=GGE_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0626 GCA_000222085.2|AFQR01000012.1 Genbank CDS 3727 4464 . + 0 ID=cds-EGT82528.1;Parent=gene-GGE_0626;Dbxref=GeneID:1175730,NCBI_GP:EGT82528.1;Name=EGT82528.1;Note=HI_1310;gbkey=CDS;locus_tag=GGE_0626;product=hypothetical protein;protein_id=EGT82528.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3976 3985 . + . ID=id-GGE_0626;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0626 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3793 4318 . - . ID=id-AFQR01000012.1:3793..4318;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 3810 3819 . - . ID=id-AFQR01000012.1:3810..3819;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4116 4125 . - . ID=id-AFQR01000012.1:4116..4125;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 4613 5602 . + . ID=gene-GGE_0627;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank CDS 4613 5602 . + 0 ID=cds-EGT82529.1;Parent=gene-GGE_0627;Dbxref=GeneID:1174507,InterPro:IPR002319,InterPro:IPR004188,InterPro:IPR004529,InterPro:IPR006195,InterPro:IPR010978,PFAM:PF01409,PFAM:PF02912,TIGRFAM:TIGR00468,NCBI_GP:EGT82529.1;Name=EGT82529.1;Ontology_term=GO:0006432,GO:0043039,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0000166,GO:0004826,GO:0000049;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,phenylalanine-tRNA ligase activity|0004826||,tRNA binding|0000049||;go_process=phenylalanyl-tRNA aminoacylation|0006432||,tRNA aminoacylation|0043039||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0627;product=Phenylalanyl-tRNA synthetase alpha chain;protein_id=EGT82529.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4613 5597 . + . ID=id-GGE_0627;Note=multi-dom%3B label: pheS;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4652 5564 . + . ID=id-GGE_0627-2;Note=HMMPanther:PTHR11538:SF16~pthr11538:sf16~HMMPanther:PTHR11538~trna-synt_2d~Gene3D:3.30.930.10~g3dsa:3.30.930.10;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4655 4877 . + . ID=id-GGE_0627-3;Dbxref=InterPro:IPR010978;Note=superfamily:SSF46589~trna_binding_arm~trna-binding arm;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4676 4823 . + . ID=id-GGE_0627-4;Dbxref=InterPro:IPR004188,PFAM:PF02912;Note=superfamily~phe_trna-synt_n~phenylalanyl-trna synthetase%2C class ii%3B label: Phe_tRNA-synt_N superfamily;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4730 5486 . + . ID=id-GGE_0627-5;Dbxref=InterPro:IPR004529,TIGRFAM:TIGR00468;Note=phes~phenylalanyl-trna synthetase%2C class iic%2C alpha subunit;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4892 5324 . + . ID=id-GGE_0627-6;Note=superfamily:SSF55681~ssf55681;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4895 5318 . + . ID=id-GGE_0627-7;Dbxref=InterPro:IPR002319,PFAM:PF01409;Note=trna-synt_2d~phenylalanyl-trna synthetase;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4940 5258 . + . ID=id-GGE_0627-8;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 4967 5243 . + . ID=id-GGE_0627-9;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=pheS;locus_tag=GGE_0627 GCA_000222085.2|AFQR01000012.1 Genbank gene 5636 8023 . + . ID=gene-GGE_0628;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank CDS 5636 8023 . + 0 ID=cds-EGT82530.1;Parent=gene-GGE_0628;Dbxref=GeneID:81335604,InterPro:IPR002547,InterPro:IPR004532,InterPro:IPR005121,InterPro:IPR005146,InterPro:IPR005147,InterPro:IPR009061,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR020825,PFAM:PF01588,PFAM:PF03147,PFAM:PF03483,PFAM:PF03484,TIGRFAM:TIGR00472,NCBI_GP:EGT82530.1;Name=EGT82530.1;Ontology_term=GO:0006432,GO:0008033,GO:0006412,GO:0005737,GO:0005524,GO:0003723,GO:0000287,GO:0000166,GO:0004826,GO:0000049;gbkey=CDS;gene=pheT;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,RNA binding|0003723||,magnesium ion binding|0000287||,nucleotide binding|0000166||,phenylalanine-tRNA ligase activity|0004826||,tRNA binding|0000049||;go_process=phenylalanyl-tRNA aminoacylation|0006432||,tRNA processing|0008033||,translation|0006412||;locus_tag=GGE_0628;product=Phenylalanyl-tRNA synthetase beta chain;protein_id=EGT82530.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5636 8021 . + . ID=id-GGE_0628;Note=multi-dom%3B label: pheT;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5636 8018 . + . ID=id-GGE_0628-2;Dbxref=InterPro:IPR004532,TIGRFAM:TIGR00472;Note=phet_bact: phenylalanyl-trna synthetase%2C be~phenylalanyl-trna synthetase%2C class iic%2C beta subunit%2C bacterial;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5636 7988 . + . ID=id-GGE_0628-3;Dbxref=InterPro:IPR004532;Note=HAMAP:MF_00283~phe_trna_synth_beta1~phenylalanyl-trna synthetase%2C class iic%2C beta subunit%2C bacterial;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5642 8018 . + . ID=id-GGE_0628-4;Note=HMMPanther:PTHR10947:SF0~phenylalanyl-trna synthetase beta chain~HMMPanther:PTHR10947~phenylalanyl-trna synthetase beta chain and leucine-rich repeat-containing protein 47;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5741 6134 . + . ID=id-GGE_0628-5;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5753 5966 . + . ID=id-GGE_0628-6;Dbxref=InterPro:IPR002547;Note=ProfileScan:PS50886~trbd~trna-binding domain;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5756 5981 . + . ID=id-GGE_0628-7;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5771 5945 . + . ID=id-GGE_0628-8;Note=specific~superfamily%3B label: tRNA_bindingDomain superfamily;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5771 5942 . + . ID=id-GGE_0628-9;Dbxref=InterPro:IPR002547,PFAM:PF01588;Note=trna_bind~trna-binding domain;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6218 6254 . + . ID=id-GGE_0628-10;Dbxref=InterPro:IPR020825;Note=superfamily:SSF56037~phet/tils domain~phenylalanyl-trna synthetase%2C b3/b4;gbkey=misc_feature;gene=pheT;locus_tag=GGE_0628 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5669 6998 . - . ID=id-AFQR01000012.1:5669..6998;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5726 6101 . - . ID=id-AFQR01000012.1:5726..6101;Note=Gene3D:3.30.56.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5837 6851 . - . ID=id-AFQR01000012.1:5837..6851;Dbxref=InterPro:IPR005147,PFAM:PF03484;Note=b5~trna synthetase%2C b5;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5840 6848 . - . ID=id-AFQR01000012.1:5840..6848;Note=superfamily%3B label: B5 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5855 6845 . - . ID=id-AFQR01000012.1:5855..6845;Dbxref=InterPro:IPR005147;Note=Gene3D:3.30.56.20~trna synthetase%2C b5;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5861 6842 . - . ID=id-AFQR01000012.1:5861..6842;Dbxref=InterPro:IPR009061;Note=superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5864 6839 . - . ID=id-AFQR01000012.1:5864..6839;Dbxref=InterPro:IPR005147;Note=ProfileScan:PS51483~b5~trna synthetase%2C b5;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5915 7745 . - . ID=id-AFQR01000012.1:5915..7745;Dbxref=InterPro:IPR005121;Note=Gene3D:3.30.70.380~phenylalanyl-trna synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5918 7739 . - . ID=id-AFQR01000012.1:5918..7739;Dbxref=InterPro:IPR005121,PFAM:PF03147;Note=superfamily~fdx-acb~phenylalanyl-trna synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding~ProfileScan:PS51447~fdx_acb~phenylalanyl-trna synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding%3B label: FDX-ACB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 5936 7721 . - . ID=id-AFQR01000012.1:5936..7721;Dbxref=InterPro:IPR005121;Note=superfamily:SSF54991~anticodon-binding domain of phers~phenylalanyl-trna synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6158 6272 . - . ID=id-AFQR01000012.1:6158..6272;Dbxref=InterPro:IPR005146,PFAM:PF03483;Note=superfamily~b3_4~b3/b4 trna-binding domain%3B label: B3_4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6201 6210 . - . ID=id-AFQR01000012.1:6201..6210;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6215 7127 . - . ID=id-AFQR01000012.1:6215..7127;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6218 6230 . - . ID=id-AFQR01000012.1:6218..6230;Dbxref=InterPro:IPR020825;Note=Gene3D:3.50.40.10~phenylalanyl-trna synthetase%2C b3/b4;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6227 7118 . - . ID=id-AFQR01000012.1:6227..7118;Note=Gene3D:3.30.930.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 6308 7037 . - . ID=id-AFQR01000012.1:6308..7037;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 8025 8315 . + . ID=gene-GGE_0629;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank CDS 8025 8315 . + 0 ID=cds-EGT82531.1;Parent=gene-GGE_0629;Dbxref=GeneID:1170524,InterPro:IPR000119,InterPro:IPR005684,InterPro:IPR010992,InterPro:IPR020816,PFAM:PF00216,TIGRFAM:TIGR00987,NCBI_GP:EGT82531.1;Name=EGT82531.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||;go_process=DNA recombination|0006310||,regulation of transcription DNA-dependent|0006355||,regulation of translation|0006417||;locus_tag=GGE_0629;product=Integration host factor subunit alpha;protein_id=EGT82531.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8031 8310 . + . ID=id-GGE_0629;Dbxref=InterPro:IPR005684;Note=HAMAP:MF_00380~ihf_alpha~integration host factor%2C alpha subunit;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8031 8304 . + . ID=id-GGE_0629-2;Dbxref=InterPro:IPR000119;Note=Gene3D:4.10.520.10~histone-like bacterial dna-binding protein;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8034 8307 . + . ID=id-GGE_0629-3;Dbxref=InterPro:IPR005684,TIGRFAM:TIGR00987;Note=hima: integration host factor%2C alpha subunit~integration host factor%2C alpha subunit;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8037 8295 . + . ID=id-GGE_0629-4;Dbxref=InterPro:IPR010992;Note=superfamily:SSF47729~ihf-like dna-binding proteins~ihf-like dna-binding;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8037 8292 . + . ID=id-GGE_0629-5;Dbxref=InterPro:IPR000119,PFAM:PF00216;Note=bac_dna_binding~histone-like bacterial dna-binding protein;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8040 8286 . + . ID=id-GGE_0629-6;Note=specific~superfamily%3B label: HU_IHF;gbkey=misc_feature;gene=ihfA;locus_tag=GGE_0629 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8067 8208 . - . ID=id-AFQR01000012.1:8067..8208;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8070 8256 . - . ID=id-AFQR01000012.1:8070..8256;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8073 8154 . - . ID=id-AFQR01000012.1:8073..8154;Dbxref=InterPro:IPR000119;Note=FPrintScan:PR01727~dnabindinghu~histone-like bacterial dna-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8085 8172 . - . ID=id-AFQR01000012.1:8085..8172;Dbxref=InterPro:IPR020816;Note=PatternScan:PS00045~histone_like~histone-like dna-binding protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8325 8334 . + . ID=id-AFQR01000012.1:8325..8334;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8343 8352 . - . ID=id-AFQR01000012.1:8343..8352;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 8368 8853 . + . ID=gene-GGE_0630;Name=GGE_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank CDS 8368 8853 . + 0 ID=cds-EGT82532.1;Parent=gene-GGE_0630;Dbxref=GeneID:2833488,InterPro:IPR000064,PFAM:PF00877,NCBI_GP:EGT82532.1;Name=EGT82532.1;Note=HI_1314;gbkey=CDS;locus_tag=GGE_0630;product=putative lipoprotein;protein_id=EGT82532.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8368 8425 . + . ID=id-GGE_0630;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8458 8764 . + . ID=id-GGE_0630-2;Note=superfamily:SSF54001~cysteine proteinases;gbkey=misc_feature;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8509 8713 . + . ID=id-GGE_0630-3;Note=Gene3D:3.90.1720.10;gbkey=misc_feature;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8533 8689 . + . ID=id-GGE_0630-4;Note=HMMPanther:PTHR21666:SF1~nlp/p60 family secreted protein~HMMPanther:PTHR21666~family not named;gbkey=misc_feature;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8533 8686 . + . ID=id-GGE_0630-5;Dbxref=InterPro:IPR000064,PFAM:PF00877;Note=superfamily~nlpc_p60~nlp/p60%3B label: NLPC_P60 superfamily;gbkey=misc_feature;locus_tag=GGE_0630 GCA_000222085.2|AFQR01000012.1 Genbank gene 8918 9871 . + . ID=gene-GGE_0631;Name=GGE_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0631 GCA_000222085.2|AFQR01000012.1 Genbank CDS 8918 9871 . + 0 ID=cds-EGT82533.1;Parent=gene-GGE_0631;Dbxref=GeneID:145636217,NCBI_GP:EGT82533.1;Name=EGT82533.1;Note=ZP_01791887~CGSHiHH_09720;gbkey=CDS;locus_tag=GGE_0631;product=Hypothetical protein;protein_id=EGT82533.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 8951 9839 . + . ID=id-GGE_0631;Note=multi-dom%3B label: COG2378;gbkey=misc_feature;locus_tag=GGE_0631 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 9397 9406 . - . ID=id-AFQR01000012.1:9397..9406;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 9930 10820 . + . ID=gene-GGE_0632;Name=GGE_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0632 GCA_000222085.2|AFQR01000012.1 Genbank CDS 9930 10820 . + 0 ID=cds-EGT82534.1;Parent=gene-GGE_0632;Dbxref=GeneID:301155866,InterPro:IPR010708,InterPro:IPR023214,PFAM:PF06941,NCBI_GP:EGT82534.1;Name=EGT82534.1;Note=CBW15334;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||;locus_tag=GGE_0632;product=putative 5'3'-deoxyribonucleotidase;protein_id=EGT82534.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 9930 10377 . + . ID=id-GGE_0632;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_0632 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 9930 10296 . + . ID=id-GGE_0632-2;Note=superfamily%3B label: NT5C superfamily;gbkey=misc_feature;locus_tag=GGE_0632 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10017 10293 . + . ID=id-GGE_0632-3;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;locus_tag=GGE_0632 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10035 10200 . + . ID=id-GGE_0632-4;Dbxref=InterPro:IPR010708,PFAM:PF06941;Note=nt5c~5'(3')-deoxyribonucleotidase;gbkey=misc_feature;locus_tag=GGE_0632 GCA_000222085.2|AFQR01000012.1 Genbank gene 10917 11534 . + . ID=gene-GGE_0633;Name=GGE_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank CDS 10917 11534 . + 0 ID=cds-EGT82535.1;Parent=gene-GGE_0633;Dbxref=GeneID:301155867,InterPro:IPR003000,PFAM:PF02146,NCBI_GP:EGT82535.1;Name=EGT82535.1;Note=CBW15335;Ontology_term=GO:0006342,GO:0006476,GO:0045449,GO:0070403,GO:0016811,GO:0008270;gbkey=CDS;go_function=NAD binding|0070403||,hydrolase activity acting on carbon-nitrogen (but not peptide) bonds in linear amides|0016811||,zinc ion binding|0008270||;go_process=chromatin silencing|0006342||,protein deacetylation|0006476||,regulation of transcription|0045449||;locus_tag=GGE_0633;product=deacetylase of acetyl-CoA synthetase%2C NAD-dependent;protein_id=EGT82535.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10917 11526 . + . ID=id-GGE_0633;Dbxref=InterPro:IPR003000;Note=ProfileScan:PS50305~sirtuin~nad-dependent histone deacetylase%2C silent information regulator sir2;gbkey=misc_feature;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10917 11511 . + . ID=id-GGE_0633-2;Dbxref=InterPro:IPR003000;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain~HMMPanther:PTHR11085~family not named~nad-dependent histone deacetylase%2C silent information regulator sir2;gbkey=misc_feature;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10917 11502 . + . ID=id-GGE_0633-3;Note=specific~superfamily%3B label: SIR2 superfamily;gbkey=misc_feature;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10917 11367 . + . ID=id-GGE_0633-4;Dbxref=InterPro:IPR003000,PFAM:PF02146;Note=sir2~nad-dependent histone deacetylase%2C silent information regulator sir2;gbkey=misc_feature;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 10926 11511 . + . ID=id-GGE_0633-5;Note=Gene3D:3.40.50.1220;gbkey=misc_feature;locus_tag=GGE_0633 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11541 11550 . - . ID=id-AFQR01000012.1:11541..11550;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 11585 12586 . - . ID=gene-GGE_0634;Name=GGE_0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0634 GCA_000222085.2|AFQR01000012.1 Genbank CDS 11585 12586 . - 0 ID=cds-EGT82536.1;Parent=gene-GGE_0634;Dbxref=GeneID:325578838,InterPro:IPR003812,InterPro:IPR006440,PFAM:PF02661,TIGRFAM:TIGR01550,NCBI_GP:EGT82536.1;Name=EGT82536.1;Note=ZP_08148885;gbkey=CDS;locus_tag=GGE_0634;product=phosphoribosylaminoimidazole-succinocarboxamide synthetase;protein_id=EGT82536.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11606 11957 . - . ID=id-GGE_0634;Note=multi-dom%3B label: COG3943;gbkey=misc_feature;locus_tag=GGE_0634 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11651 11963 . + . ID=id-AFQR01000012.1:11651..11963;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11687 12329 . + . ID=id-AFQR01000012.1:11687..12329;Note=superfamily%3B label: Fic superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11690 12338 . + . ID=id-AFQR01000012.1:11690..12338;Note=superfamily:SSF140931~fic-like;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11753 12263 . + . ID=id-AFQR01000012.1:11753..12263;Dbxref=InterPro:IPR003812,PFAM:PF02661;Note=fic~filamentation induced by camp/death on curing-related;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11960 12176 . + . ID=id-AFQR01000012.1:11960..12176;Dbxref=InterPro:IPR006440,TIGRFAM:TIGR01550;Note=doc_p1: death-on-curing family protein~death-on-curing protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 11969 12179 . + . ID=id-AFQR01000012.1:11969..12179;Dbxref=InterPro:IPR003812;Note=ProfileScan:PS51459~fido~filamentation induced by camp/death on curing-related;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 12806 13006 . + . ID=gene-GGE_0635;Name=GGE_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0635 GCA_000222085.2|AFQR01000012.1 Genbank CDS 12806 13006 . + 0 ID=cds-EGT82537.1;Parent=gene-GGE_0635;Dbxref=GeneID:148826986,InterPro:IPR018541,PFAM:PF09397,NCBI_GP:EGT82537.1;Name=EGT82537.1;Note=YP_001291739;gbkey=CDS;locus_tag=GGE_0635;product=DNA translocase FtsK;protein_id=EGT82537.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 12821 12992 . + . ID=id-GGE_0635;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0635 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 12833 12980 . + . ID=id-GGE_0635-2;Dbxref=InterPro:IPR018541,PFAM:PF09397;Note=superfamily~ftsk_gamma~dna translocase ftsk gamma%3B label: Ftsk_gamma superfamily;gbkey=misc_feature;locus_tag=GGE_0635 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 12836 12977 . + . ID=id-GGE_0635-3;Note=HMMPanther:PTHR22683:SF1~dna translocase ftsk~HMMPanther:PTHR22683~family not named;gbkey=misc_feature;locus_tag=GGE_0635 GCA_000222085.2|AFQR01000012.1 Genbank gene 13142 13453 . + . ID=gene-GGE_0636;Name=GGE_0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank CDS 13142 13453 . + 0 ID=cds-EGT82538.1;Parent=gene-GGE_0636;Dbxref=InterPro:IPR003000,PFAM:PF02146,NCBI_GP:EGT82538.1;Name=EGT82538.1;Note=Hypothetical nAD-dependent histone deacetylase%2C silent information regulator Sir2;Ontology_term=GO:0006342,GO:0006476,GO:0045449,GO:0070403,GO:0016811,GO:0008270;gbkey=CDS;go_function=NAD binding|0070403||,hydrolase activity acting on carbon-nitrogen (but not peptide) bonds in linear amides|0016811||,zinc ion binding|0008270||;go_process=chromatin silencing|0006342||,protein deacetylation|0006476||,regulation of transcription|0045449||;locus_tag=GGE_0636;product=putative nAD-dependent histone deacetylase%2C silent information regulator Sir2;protein_id=EGT82538.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13142 13451 . + . ID=id-GGE_0636;Dbxref=InterPro:IPR003000;Note=ProfileScan:PS50305~sirtuin~nad-dependent histone deacetylase%2C silent information regulator sir2;gbkey=misc_feature;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13151 13439 . + . ID=id-GGE_0636-2;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain;gbkey=misc_feature;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13160 13409 . + . ID=id-GGE_0636-3;Dbxref=InterPro:IPR003000,PFAM:PF02146;Note=sir2~nad-dependent histone deacetylase%2C silent information regulator sir2;gbkey=misc_feature;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13166 13409 . + . ID=id-GGE_0636-4;Note=Gene3D:3.40.50.1220;gbkey=misc_feature;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13172 13397 . + . ID=id-GGE_0636-5;Note=specific~superfamily%3B label: SIR2;gbkey=misc_feature;locus_tag=GGE_0636 GCA_000222085.2|AFQR01000012.1 Genbank gene 13603 13983 . - . ID=gene-GGE_0637;Name=GGE_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0637 GCA_000222085.2|AFQR01000012.1 Genbank CDS 13603 13983 . - 0 ID=cds-EGT82539.1;Parent=gene-GGE_0637;Dbxref=GeneID:145635892,InterPro:IPR009363,PFAM:PF06252,NCBI_GP:EGT82539.1;Name=EGT82539.1;Note=ZP_01791580~CGSHiAA_00200;gbkey=CDS;locus_tag=GGE_0637;product=Hypothetical protein;protein_id=EGT82539.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13648 13927 . - . ID=id-GGE_0637;Dbxref=InterPro:IPR014875,PFAM:PF08765;Note=superfamily~mor~mor transcription activator%3B label: Mor superfamily;gbkey=misc_feature;locus_tag=GGE_0637 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13648 13903 . - . ID=id-GGE_0637-2;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_0637 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 13986 14223 . - . ID=id-AFQR01000012.1:13986..14223;Dbxref=InterPro:IPR009363,PFAM:PF06252;Note=superfamily~duf1018~protein of unknown function gp16%3B label: DUF1018 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 14034 14307 . - . ID=id-AFQR01000012.1:14034..14307;Dbxref=InterPro:IPR009363,PFAM:PF06252;Note=superfamily~duf1018~protein of unknown function gp16%3B label: DUF1018 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 14369 14429 . - . ID=id-AFQR01000012.1:14369..14429;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 14494 14701 . + . ID=id-AFQR01000012.1:14494..14701;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 14724 15203 . - . ID=gene-GGE_0638;Name=GGE_0638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0638 GCA_000222085.2|AFQR01000012.1 Genbank CDS 14724 15203 . - 0 ID=cds-EGT82540.1;Parent=gene-GGE_0638;Dbxref=GeneID:145635894,NCBI_GP:EGT82540.1;Name=EGT82540.1;Note=ZP_01791582~CGSHiAA_00210;gbkey=CDS;locus_tag=GGE_0638;product=Hypothetical protein;protein_id=EGT82540.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 14766 14781 . + . ID=id-AFQR01000012.1:14766..14781;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 15254 15412 . - . ID=gene-GGE_0639;Name=GGE_0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0639 GCA_000222085.2|AFQR01000012.1 Genbank CDS 15254 15412 . - 0 ID=cds-EGT82541.1;Parent=gene-GGE_0639;Dbxref=GeneID:145635896,NCBI_GP:EGT82541.1;Name=EGT82541.1;Note=ZP_01791584~CGSHiAA_00220;gbkey=CDS;locus_tag=GGE_0639;product=Hypothetical protein;protein_id=EGT82541.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15260 15350 . - . ID=id-GGE_0639;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0639 GCA_000222085.2|AFQR01000012.1 Genbank gene 15409 15630 . - . ID=gene-GGE_0640;Name=GGE_0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0640 GCA_000222085.2|AFQR01000012.1 Genbank CDS 15409 15630 . - 0 ID=cds-EGT82542.1;Parent=gene-GGE_0640;Dbxref=GeneID:145635897,InterPro:IPR020107,PFAM:PF06069,NCBI_GP:EGT82542.1;Name=EGT82542.1;Note=ZP_01791585;gbkey=CDS;locus_tag=GGE_0640;product=putative perC;protein_id=EGT82542.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15457 15577 . - . ID=id-GGE_0640;Dbxref=InterPro:IPR020107;Note=BlastProDom:PD056718~q7vld5_haedu_q7vld5~uncharacterised protein family hi1485;gbkey=misc_feature;locus_tag=GGE_0640 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15475 15538 . - . ID=id-GGE_0640-2;Dbxref=PFAM:PF06069;Note=perc;gbkey=misc_feature;locus_tag=GGE_0640 GCA_000222085.2|AFQR01000012.1 Genbank gene 15630 16151 . - . ID=gene-GGE_0641;Name=GGE_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0641 GCA_000222085.2|AFQR01000012.1 Genbank CDS 15630 16151 . - 0 ID=cds-EGT82543.1;Parent=gene-GGE_0641;Dbxref=GeneID:219871066,InterPro:IPR009951,PFAM:PF07352,NCBI_GP:EGT82543.1;Name=EGT82543.1;Note=YP_002475441;Ontology_term=GO:0042262,GO:0003690;gbkey=CDS;go_function=double-stranded DNA binding|0003690||;go_process=DNA protection|0042262||;locus_tag=GGE_0641;product=host-nuclease inhibitor protein;protein_id=EGT82543.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15639 16143 . - . ID=id-GGE_0641;Note=superfamily%3B label: Phage_Mu_Gam superfamily;gbkey=misc_feature;locus_tag=GGE_0641 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15678 15696 . - . ID=id-GGE_0641-2;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0641 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 15687 16077 . - . ID=id-GGE_0641-3;Dbxref=InterPro:IPR009951,PFAM:PF07352;Note=phage_mu_gam~bacteriophage mu gam-like;gbkey=misc_feature;locus_tag=GGE_0641 GCA_000222085.2|AFQR01000012.1 Genbank gene 16370 16573 . - . ID=gene-GGE_0642;Name=GGE_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0642 GCA_000222085.2|AFQR01000012.1 Genbank CDS 16370 16573 . - 0 ID=cds-EGT82544.1;Parent=gene-GGE_0642;Dbxref=GeneID:145635900,NCBI_GP:EGT82544.1;Name=EGT82544.1;Note=ZP_01791588;gbkey=CDS;locus_tag=GGE_0642;product=putative lipoprotein;protein_id=EGT82544.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16370 16418 . - . ID=id-GGE_0642;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0642 GCA_000222085.2|AFQR01000012.1 Genbank gene 16582 17754 . - . ID=gene-GGE_0643;Name=GGE_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank CDS 16582 17754 . - 0 ID=cds-EGT82545.1;Parent=gene-GGE_0643;Dbxref=GeneID:145635901,InterPro:IPR001387,PFAM:PF01381,NCBI_GP:EGT82545.1;Name=EGT82545.1;Note=ZP_01791589;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||;locus_tag=GGE_0643;product=Eha protein;protein_id=EGT82545.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16591 16693 . - . ID=id-GGE_0643;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16594 16675 . - . ID=id-GGE_0643-2;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16906 17422 . - . ID=id-GGE_0643-3;Note=multi-dom%3B label: ExeA;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16909 17296 . - . ID=id-GGE_0643-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16990 17026 . - . ID=id-GGE_0643-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 17005 17185 . - . ID=id-GGE_0643-6;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0643 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 16621 17464 . + . ID=id-AFQR01000012.1:16621..17464;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 18755 19765 . + . ID=gene-GGE_0644;Name=GGE_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0644 GCA_000222085.2|AFQR01000012.1 Genbank CDS 18755 19765 . + 0 ID=cds-EGT82546.1;Parent=gene-GGE_0644;Dbxref=GeneID:145635814,NCBI_GP:EGT82546.1;Name=EGT82546.1;Note=ZP_01791506~CGSHiAA_01032;gbkey=CDS;locus_tag=GGE_0644;product=Hypothetical protein;protein_id=EGT82546.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 18791 19247 . - . ID=id-AFQR01000012.1:18791..19247;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 18809 19346 . - . ID=id-AFQR01000012.1:18809..19346;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 18899 19295 . - . ID=id-AFQR01000012.1:18899..19295;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 19777 20703 . + . ID=gene-GGE_0645;Name=GGE_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0645 GCA_000222085.2|AFQR01000012.1 Genbank CDS 19777 20703 . + 0 ID=cds-EGT82547.1;Parent=gene-GGE_0645;Dbxref=GeneID:145635813,NCBI_GP:EGT82547.1;Name=EGT82547.1;Note=ZP_01791505~CGSHiAA_01027;gbkey=CDS;locus_tag=GGE_0645;product=Hypothetical protein;protein_id=EGT82547.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 19783 20698 . + . ID=id-GGE_0645;Note=Gene3D:3.90.1690.10;gbkey=misc_feature;locus_tag=GGE_0645 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 20035 20110 . + . ID=id-GGE_0645-2;Note=superfamily%3B label: Phage_cap_E superfamily;gbkey=misc_feature;locus_tag=GGE_0645 GCA_000222085.2|AFQR01000012.1 Genbank gene 21050 21484 . + . ID=gene-GGE_0646;Name=GGE_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0646 GCA_000222085.2|AFQR01000012.1 Genbank CDS 21050 21484 . + 0 ID=cds-EGT82548.1;Parent=gene-GGE_0646;Dbxref=GeneID:145635811,InterPro:IPR009752,PFAM:PF07030,NCBI_GP:EGT82548.1;Name=EGT82548.1;Note=ZP_01791503~CGSHiAA_01017;gbkey=CDS;locus_tag=GGE_0646;product=Hypothetical protein;protein_id=EGT82548.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21056 21455 . + . ID=id-GGE_0646;Note=superfamily%3B label: DUF1320 superfamily;gbkey=misc_feature;locus_tag=GGE_0646 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21056 21452 . + . ID=id-GGE_0646-2;Dbxref=InterPro:IPR009752,PFAM:PF07030;Note=duf1320~protein of unknown function duf1320;gbkey=misc_feature;locus_tag=GGE_0646 GCA_000222085.2|AFQR01000012.1 Genbank gene 21496 21963 . + . ID=gene-GGE_0647;Name=GGE_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0647 GCA_000222085.2|AFQR01000012.1 Genbank CDS 21496 21963 . + 0 ID=cds-EGT82549.1;Parent=gene-GGE_0647;Dbxref=GeneID:145635810,InterPro:IPR018602,PFAM:PF09646,NCBI_GP:EGT82549.1;Name=EGT82549.1;Note=ZP_01791502;gbkey=CDS;locus_tag=GGE_0647;product=putative Hypothetical protein domain Gp37;protein_id=EGT82549.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21502 21904 . + . ID=id-GGE_0647;Note=superfamily:SSF143749~phage tail like protein;gbkey=misc_feature;locus_tag=GGE_0647 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21529 21928 . + . ID=id-GGE_0647-2;Dbxref=InterPro:IPR018602,PFAM:PF09646;Note=superfamily~gp37~uncharacterised protein domain gp37%3B label: Gp37 superfamily;gbkey=misc_feature;locus_tag=GGE_0647 GCA_000222085.2|AFQR01000012.1 Genbank gene 21974 23359 . + . ID=gene-GGE_0648;Name=GGE_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0648 GCA_000222085.2|AFQR01000012.1 Genbank CDS 21974 23359 . + 0 ID=cds-EGT82550.1;Parent=gene-GGE_0648;Dbxref=GeneID:145635809,InterPro:IPR007067,PFAM:PF04984,NCBI_GP:EGT82550.1;Name=EGT82550.1;Note=ZP_01791501;gbkey=CDS;locus_tag=GGE_0648;product=putative phage tail sheath protein;protein_id=EGT82550.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21983 23270 . + . ID=id-GGE_0648;Dbxref=InterPro:IPR007067,PFAM:PF04984;Note=phage_sheath_1~phage tail sheath protein;gbkey=misc_feature;locus_tag=GGE_0648 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 21983 22235 . + . ID=id-GGE_0648-2;Note=superfamily%3B label: Phage_sheath_1 superfamily;gbkey=misc_feature;locus_tag=GGE_0648 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 22448 22877 . + . ID=id-GGE_0648-3;Note=superfamily%3B label: Phage_sheath_1 superfamily;gbkey=misc_feature;locus_tag=GGE_0648 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 22010 22592 . - . ID=id-AFQR01000012.1:22010..22592;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 23372 23890 . + . ID=gene-GGE_0649;Name=GGE_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0649 GCA_000222085.2|AFQR01000012.1 Genbank CDS 23372 23890 . + 0 ID=cds-EGT82551.1;Parent=gene-GGE_0649;Dbxref=GeneID:145635808,InterPro:IPR006498,PFAM:PF04985,TIGRFAM:TIGR01611,NCBI_GP:EGT82551.1;Name=EGT82551.1;Note=ZP_01791500;gbkey=CDS;locus_tag=GGE_0649;product=putative phage major tail tube protein;protein_id=EGT82551.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 23381 23882 . + . ID=id-GGE_0649;Dbxref=InterPro:IPR006498,TIGRFAM:TIGR01611;Note=tail_tube: phage major tail tube protein~phage major tail tube protein;gbkey=misc_feature;locus_tag=GGE_0649 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 23384 23876 . + . ID=id-GGE_0649-2;Note=superfamily%3B label: Phage_tube superfamily;gbkey=misc_feature;locus_tag=GGE_0649 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 23387 23873 . + . ID=id-GGE_0649-3;Dbxref=InterPro:IPR006498,PFAM:PF04985;Note=phage_tube~phage major tail tube protein;gbkey=misc_feature;locus_tag=GGE_0649 GCA_000222085.2|AFQR01000012.1 Genbank gene 23980 24264 . + . ID=gene-GGE_0650;Name=GGE_0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0650 GCA_000222085.2|AFQR01000012.1 Genbank CDS 23980 24264 . + 0 ID=cds-EGT82552.1;Parent=gene-GGE_0650;Dbxref=GeneID:319896817,NCBI_GP:EGT82552.1;Name=EGT82552.1;Note=YP_004135011;gbkey=CDS;locus_tag=GGE_0650;product=Hypothetical protein;protein_id=EGT82552.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank gene 24206 24394 . + . ID=gene-GGE_0651;Name=GGE_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0651 GCA_000222085.2|AFQR01000012.1 Genbank CDS 24206 24394 . + 0 ID=cds-EGT82553.1;Parent=gene-GGE_0651;Dbxref=InterPro:IPR009493,PFAM:PF06528,NCBI_GP:EGT82553.1;Name=EGT82553.1;Note=Hypothetical phage P2 GpE;gbkey=CDS;locus_tag=GGE_0651;product=putative phage P2 GpE;protein_id=EGT82553.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24272 24314 . + . ID=id-GGE_0651;Dbxref=InterPro:IPR009493,PFAM:PF06528;Note=phage_p2_gpe~phage p2 gpe;gbkey=misc_feature;locus_tag=GGE_0651 GCA_000222085.2|AFQR01000012.1 Genbank gene 24379 24693 . - . ID=gene-GGE_0652;Name=GGE_0652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0652 GCA_000222085.2|AFQR01000012.1 Genbank CDS 24379 24693 . - 0 ID=cds-EGT82554.1;Parent=gene-GGE_0652;Dbxref=GeneID:145635805,NCBI_GP:EGT82554.1;Name=EGT82554.1;Note=ZP_01791497~CGSHiAA_00987;gbkey=CDS;locus_tag=GGE_0652;product=Hypothetical protein;protein_id=EGT82554.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24445 24448 . - . ID=id-GGE_0652;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0652 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24448 24610 . + . ID=id-AFQR01000012.1:24448..24610;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24448 24532 . + . ID=id-AFQR01000012.1:24448..24532;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 24739 27513 . + . ID=gene-GGE_0653;Name=GGE_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0653 GCA_000222085.2|AFQR01000012.1 Genbank CDS 24739 27513 . + 0 ID=cds-EGT82555.1;Parent=gene-GGE_0653;Dbxref=GeneID:319896816,InterPro:IPR010090,PFAM:PF10145,TIGRFAM:TIGR01760,NCBI_GP:EGT82555.1;Name=EGT82555.1;Note=YP_004135010;gbkey=CDS;locus_tag=GGE_0653;product=Hypothetical protein;protein_id=EGT82555.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24808 24847 . + . ID=id-GGE_0653;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0653 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 25165 25855 . + . ID=id-GGE_0653-2;Dbxref=InterPro:IPR010090,TIGRFAM:TIGR01760;Note=tape_meas_tp901: phage tail tape meas~phage tail tape measure protein tp901%2C core region;gbkey=misc_feature;locus_tag=GGE_0653 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 25288 25405 . + . ID=id-GGE_0653-3;Dbxref=InterPro:IPR010090,PFAM:PF10145;Note=multi-dom~phagemin_tail~phage tail tape measure protein tp901%2C core region%3B label: PhageMin_Tail;gbkey=misc_feature;locus_tag=GGE_0653 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 26110 26119 . + . ID=id-GGE_0653-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0653 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 24781 26299 . - . ID=id-AFQR01000012.1:24781..26299;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 25276 26383 . - . ID=id-AFQR01000012.1:25276..26383;Note=multi-dom%3B label: COG5412;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 27513 28448 . + . ID=gene-GGE_0654;Name=GGE_0654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0654 GCA_000222085.2|AFQR01000012.1 Genbank CDS 27513 28448 . + 0 ID=cds-EGT82556.1;Parent=gene-GGE_0654;Dbxref=GeneID:145635803,InterPro:IPR009734,PFAM:PF06995,NCBI_GP:EGT82556.1;Name=EGT82556.1;Note=ZP_01791495;gbkey=CDS;locus_tag=GGE_0654;product=putative phage P2 GpU;protein_id=EGT82556.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 27519 27879 . + . ID=id-GGE_0654;Note=superfamily%3B label: Phage_P2_GpU superfamily;gbkey=misc_feature;locus_tag=GGE_0654 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 27552 27840 . + . ID=id-GGE_0654-2;Dbxref=InterPro:IPR009734,PFAM:PF06995;Note=phage_p2_gpu~phage p2 gpu;gbkey=misc_feature;locus_tag=GGE_0654 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 27981 27990 . + . ID=id-GGE_0654-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0654 GCA_000222085.2|AFQR01000012.1 Genbank gene 28429 28659 . + . ID=gene-GGE_0655;Name=GGE_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0655 GCA_000222085.2|AFQR01000012.1 Genbank CDS 28429 28659 . + 0 ID=cds-EGT82557.1;Parent=gene-GGE_0655;Dbxref=GeneID:145635802,InterPro:IPR008861,PFAM:PF05489,NCBI_GP:EGT82557.1;Name=EGT82557.1;Note=ZP_01791494;gbkey=CDS;locus_tag=GGE_0655;product=putative phage tail protein X;protein_id=EGT82557.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28456 28591 . + . ID=id-GGE_0655;Note=superfamily%3B label: Phage_tail_X superfamily;gbkey=misc_feature;locus_tag=GGE_0655 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28459 28588 . + . ID=id-GGE_0655-2;Dbxref=InterPro:IPR008861,PFAM:PF05489;Note=phage_tail_x~phage tail protein x;gbkey=misc_feature;locus_tag=GGE_0655 GCA_000222085.2|AFQR01000012.1 Genbank gene 28652 29716 . + . ID=gene-GGE_0656;Name=GGE_0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0656 GCA_000222085.2|AFQR01000012.1 Genbank CDS 28652 29716 . + 0 ID=cds-EGT82558.1;Parent=gene-GGE_0656;Dbxref=GeneID:145635801,InterPro:IPR010277,PFAM:PF05954,NCBI_GP:EGT82558.1;Name=EGT82558.1;Note=ZP_01791493;gbkey=CDS;locus_tag=GGE_0656;product=putative bacteriophage P2%2C GpD%2C late control;protein_id=EGT82558.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28652 29654 . + . ID=id-GGE_0656;Note=superfamily%3B label: COG3500 superfamily;gbkey=misc_feature;locus_tag=GGE_0656 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28673 29642 . + . ID=id-GGE_0656-2;Note=multi-dom%3B label: Phage_GPD;gbkey=misc_feature;locus_tag=GGE_0656 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28673 29636 . + . ID=id-GGE_0656-3;Dbxref=InterPro:IPR010277,PFAM:PF05954;Note=phage_gpd~bacteriophage p2%2C gpd%2C late control;gbkey=misc_feature;locus_tag=GGE_0656 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 28679 29330 . - . ID=id-AFQR01000012.1:28679..29330;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 29703 30209 . + . ID=gene-GGE_0657;Name=GGE_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0657 GCA_000222085.2|AFQR01000012.1 Genbank CDS 29703 30209 . + 0 ID=cds-EGT82559.1;Parent=gene-GGE_0657;Dbxref=GeneID:145635800,InterPro:IPR006531,InterPro:IPR013046,PFAM:PF04717,TIGRFAM:TIGR01644,NCBI_GP:EGT82559.1;Name=EGT82559.1;Note=ZP_01791492;gbkey=CDS;locus_tag=GGE_0657;product=putative gp5 N-terminal-like domain-containing protein;protein_id=EGT82559.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 29715 30192 . + . ID=id-GGE_0657;Dbxref=InterPro:IPR013046,TIGRFAM:TIGR01644;Note=phage_p2_v: phage baseplate assembly prote~phage-related baseplate assembly protein v;gbkey=misc_feature;locus_tag=GGE_0657 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 29742 29937 . + . ID=id-GGE_0657-2;Note=superfamily%3B label: Phage_base_V superfamily;gbkey=misc_feature;locus_tag=GGE_0657 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 29742 29934 . + . ID=id-GGE_0657-3;Dbxref=InterPro:IPR006531,PFAM:PF04717;Note=phage_base_v~gp5 n-terminal-like domain;gbkey=misc_feature;locus_tag=GGE_0657 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 29771 29780 . + . ID=id-GGE_0657-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0657 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 29775 30063 . - . ID=id-AFQR01000012.1:29775..30063;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30217 30226 . - . ID=id-AFQR01000012.1:30217..30226;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 30281 30643 . + . ID=gene-GGE_0658;Name=GGE_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0658 GCA_000222085.2|AFQR01000012.1 Genbank CDS 30281 30643 . + 0 ID=cds-EGT82560.1;Parent=gene-GGE_0658;Dbxref=GeneID:145635799,InterPro:IPR007048,InterPro:IPR015801,PFAM:PF04965,NCBI_GP:EGT82560.1;Name=EGT82560.1;Note=ZP_01791491;Ontology_term=GO:0009308,GO:0055114,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;go_function=copper ion binding|0005507||,primary amine oxidase activity|0008131||,quinone binding|0048038||;go_process=amine metabolic process|0009308||,oxidation-reduction process|0055114||;locus_tag=GGE_0658;product=putative copper amine oxidase%2C N2/N3-terminal;protein_id=EGT82560.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30290 30599 . + . ID=id-GGE_0658;Dbxref=InterPro:IPR015801;Note=Gene3D:3.10.450.40~copper amine oxidase%2C n2/n3-terminal;gbkey=misc_feature;locus_tag=GGE_0658 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30305 30575 . + . ID=id-GGE_0658-2;Note=superfamily%3B label: GPW_gp25 superfamily;gbkey=misc_feature;locus_tag=GGE_0658 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30344 30497 . + . ID=id-GGE_0658-3;Dbxref=InterPro:IPR007048,PFAM:PF04965;Note=gpw_gp25~gpw/gp25;gbkey=misc_feature;locus_tag=GGE_0658 GCA_000222085.2|AFQR01000012.1 Genbank gene 30640 31740 . + . ID=gene-GGE_0659;Name=GGE_0659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0659 GCA_000222085.2|AFQR01000012.1 Genbank CDS 30640 31740 . + 0 ID=cds-EGT82561.1;Parent=gene-GGE_0659;Dbxref=GeneID:52424136,InterPro:IPR006949,InterPro:IPR014507,PFAM:PF04865,PIR:PIRSF020481,NCBI_GP:EGT82561.1;Name=EGT82561.1;Note=YP_087273;gbkey=CDS;locus_tag=GGE_0659;product=putative baseplate assembly protein J%2C predicted;protein_id=EGT82561.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30661 31714 . + . ID=id-GGE_0659;Dbxref=InterPro:IPR014507,PIR:PIRSF020481;Note=predicted baseplate assembly protein%2C phage type~baseplate assembly protein j%2C predicted;gbkey=misc_feature;locus_tag=GGE_0659 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30754 31606 . + . ID=id-GGE_0659-2;Note=superfamily%3B label: Baseplate_J superfamily;gbkey=misc_feature;locus_tag=GGE_0659 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 30850 31402 . + . ID=id-GGE_0659-3;Dbxref=InterPro:IPR006949,PFAM:PF04865;Note=baseplate_j~baseplate assembly protein j-like%2C predicted;gbkey=misc_feature;locus_tag=GGE_0659 GCA_000222085.2|AFQR01000012.1 Genbank gene 31733 32311 . + . ID=gene-GGE_0660;Name=GGE_0660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0660 GCA_000222085.2|AFQR01000012.1 Genbank CDS 31733 32311 . + 0 ID=cds-EGT82562.1;Parent=gene-GGE_0660;Dbxref=GeneID:52424135,PFAM:PF09684,NCBI_GP:EGT82562.1;Name=EGT82562.1;Note=YP_087272;gbkey=CDS;locus_tag=GGE_0660;product=Hypothetical protein;protein_id=EGT82562.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 31784 32171 . + . ID=id-GGE_0660;Dbxref=PFAM:PF09684;Note=tail_p2_i;gbkey=misc_feature;locus_tag=GGE_0660 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 31850 32105 . + . ID=id-GGE_0660-2;Note=superfamily%3B label: Tail_P2_I superfamily;gbkey=misc_feature;locus_tag=GGE_0660 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 32380 32866 . - . ID=id-AFQR01000012.1:32380..32866;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 33393 34016 . + . ID=gene-GGE_0661;Name=GGE_0661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0661 GCA_000222085.2|AFQR01000012.1 Genbank CDS 33393 34016 . + 0 ID=cds-EGT82563.1;Parent=gene-GGE_0661;Dbxref=GeneID:229844526,NCBI_GP:EGT82563.1;Name=EGT82563.1;Note=ZP_04464666~CGSHi6P18H1_09430;gbkey=CDS;locus_tag=GGE_0661;product=Hypothetical protein;protein_id=EGT82563.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 33459 33942 . - . ID=id-AFQR01000012.1:33459..33942;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 34009 34497 . + . ID=gene-GGE_0662;Name=GGE_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0662 GCA_000222085.2|AFQR01000012.1 Genbank CDS 34009 34497 . + 0 ID=cds-EGT82564.1;Parent=gene-GGE_0662;Dbxref=GeneID:145639959,NCBI_GP:EGT82564.1;Name=EGT82564.1;Note=ZP_01795558~CGSHiII_07033;gbkey=CDS;locus_tag=GGE_0662;product=Hypothetical protein;protein_id=EGT82564.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34081 34339 . + . ID=id-GGE_0662;Note=Gene3D:2.30.30.330;gbkey=misc_feature;locus_tag=GGE_0662 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34315 34324 . - . ID=id-AFQR01000012.1:34315..34324;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 34673 34792 . + . ID=gene-GGE_0663;Name=GGE_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0663 GCA_000222085.2|AFQR01000012.1 Genbank CDS 34673 34792 . + 0 ID=cds-EGT82565.1;Parent=gene-GGE_0663;Dbxref=InterPro:IPR019294,PFAM:PF10122,NCBI_GP:EGT82565.1;Name=EGT82565.1;Note=HI_1522.1;gbkey=CDS;locus_tag=GGE_0663;product=Mu-like prophage FluMu protein com;protein_id=EGT82565.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34682 34781 . + . ID=id-GGE_0663;Note=superfamily%3B label: Mu-like_Com superfamily;gbkey=misc_feature;locus_tag=GGE_0663 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34685 34775 . + . ID=id-GGE_0663-2;Dbxref=InterPro:IPR019294,PFAM:PF10122;Note=mu-like_com~mu-like prophage protein com;gbkey=misc_feature;locus_tag=GGE_0663 GCA_000222085.2|AFQR01000012.1 Genbank gene 34849 35694 . + . ID=gene-GGE_0664;Name=GGE_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0664 GCA_000222085.2|AFQR01000012.1 Genbank CDS 34849 35694 . + 0 ID=cds-EGT82566.1;Parent=gene-GGE_0664;Dbxref=GeneID:319896806,InterPro:IPR012327,PFAM:PF02086,NCBI_GP:EGT82566.1;Name=EGT82566.1;Note=YP_004135000;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||;locus_tag=GGE_0664;product=putative d12 class N6 adenine-specific DNA methyltransferase;protein_id=EGT82566.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34876 35665 . + . ID=id-GGE_0664;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0664 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 34891 35431 . + . ID=id-GGE_0664-2;Dbxref=InterPro:IPR012327,PFAM:PF02086;Note=methyltransfd12~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;locus_tag=GGE_0664 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 35002 35365 . - . ID=id-AFQR01000012.1:35002..35365;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 35734 35997 . - . ID=gene-GGE_0665;Name=GGE_0665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0665 GCA_000222085.2|AFQR01000012.1 Genbank CDS 35734 35997 . - 0 ID=cds-EGT82567.1;Parent=gene-GGE_0665;Dbxref=GeneID:229844531,NCBI_GP:EGT82567.1;Name=EGT82567.1;Note=ZP_04464671~CGSHi6P18H1_09455;gbkey=CDS;locus_tag=GGE_0665;product=Hypothetical protein;protein_id=EGT82567.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank gene 36411 36929 . + . ID=gene-GGE_0666;Name=GGE_0666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0666 GCA_000222085.2|AFQR01000012.1 Genbank CDS 36411 36929 . + 0 ID=cds-EGT82568.1;Parent=gene-GGE_0666;Dbxref=GeneID:319897197,InterPro:IPR018875,PFAM:PF10547,NCBI_GP:EGT82568.1;Name=EGT82568.1;Note=YP_004135392;gbkey=CDS;locus_tag=GGE_0666;product=Hypothetical protein;protein_id=EGT82568.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36411 36759 . + . ID=id-GGE_0666;Note=superfamily%3B label: P22_AR_N superfamily;gbkey=misc_feature;locus_tag=GGE_0666 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36417 36759 . + . ID=id-GGE_0666-2;Dbxref=InterPro:IPR018875,PFAM:PF10547;Note=p22_ar_n~antirepressor protein ant;gbkey=misc_feature;locus_tag=GGE_0666 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36477 36849 . - . ID=id-AFQR01000012.1:36477..36849;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36477 36765 . - . ID=id-AFQR01000012.1:36477..36765;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36477 36480 . - . ID=id-AFQR01000012.1:36477..36480;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36480 36687 . - . ID=id-AFQR01000012.1:36480..36687;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36483 36615 . - . ID=id-AFQR01000012.1:36483..36615;Dbxref=InterPro:IPR018875;Note=FPrintScan:PR01994~antirepressr~antirepressor protein ant;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 36928 36937 . - . ID=id-AFQR01000012.1:36928..36937;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 36950 37624 . + . ID=gene-GGE_0667;Name=GGE_0667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0667 GCA_000222085.2|AFQR01000012.1 Genbank CDS 36950 37624 . + 0 ID=cds-EGT82569.1;Parent=gene-GGE_0667;Dbxref=GeneID:145640042,InterPro:IPR006487,PFAM:PF05100,TIGRFAM:TIGR01600,NCBI_GP:EGT82569.1;Name=EGT82569.1;Note=ZP_01795639;gbkey=CDS;locus_tag=GGE_0667;product=minor tail protein L;protein_id=EGT82569.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37022 37547 . + . ID=id-GGE_0667;Dbxref=InterPro:IPR006487,TIGRFAM:TIGR01600;Note=phage_tail_l: phage minor tail protein l~phage minor tail protein l;gbkey=misc_feature;locus_tag=GGE_0667 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37022 37538 . + . ID=id-GGE_0667-2;Note=superfamily%3B label: Phage_tail_L superfamily;gbkey=misc_feature;locus_tag=GGE_0667 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37046 37517 . + . ID=id-GGE_0667-3;Dbxref=InterPro:IPR006487,PFAM:PF05100;Note=phage_tail_l~phage minor tail protein l;gbkey=misc_feature;locus_tag=GGE_0667 GCA_000222085.2|AFQR01000012.1 Genbank gene 37626 38333 . + . ID=gene-GGE_0668;Name=GGE_0668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0668 GCA_000222085.2|AFQR01000012.1 Genbank CDS 37626 38333 . + 0 ID=cds-EGT82570.1;Parent=gene-GGE_0668;Dbxref=GeneID:145640043,InterPro:IPR000064,PFAM:PF00877,NCBI_GP:EGT82570.1;Name=EGT82570.1;Note=ZP_01795640;gbkey=CDS;locus_tag=GGE_0668;product=Putative phage-related protein;protein_id=EGT82570.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37632 38043 . + . ID=id-GGE_0668;Note=superfamily:SSF102712~jab1/mpn domain;gbkey=misc_feature;locus_tag=GGE_0668 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37632 37944 . + . ID=id-GGE_0668-2;Note=specific~superfamily%3B label: MPN superfamily;gbkey=misc_feature;locus_tag=GGE_0668 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37635 37977 . + . ID=id-GGE_0668-3;Note=Gene3D:3.40.140.10;gbkey=misc_feature;locus_tag=GGE_0668 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37905 38046 . + . ID=id-GGE_0668-4;Note=superfamily:SSF54001~cysteine proteinases;gbkey=misc_feature;locus_tag=GGE_0668 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37962 37986 . - . ID=id-AFQR01000012.1:37962..37986;Note=Gene3D:3.90.1720.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 37965 37977 . - . ID=id-AFQR01000012.1:37965..37977;Dbxref=InterPro:IPR000064,PFAM:PF00877;Note=superfamily~nlpc_p60~nlp/p60%3B label: NLPC_P60 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 38272 38991 . + . ID=gene-GGE_0669;Name=GGE_0669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0669 GCA_000222085.2|AFQR01000012.1 Genbank CDS 38272 38991 . + 0 ID=cds-EGT82571.1;Parent=gene-GGE_0669;Dbxref=GeneID:145629869,InterPro:IPR010654,PFAM:PF06805,NCBI_GP:EGT82571.1;Name=EGT82571.1;Note=ZP_01785662;gbkey=CDS;locus_tag=GGE_0669;product=Putative phage-related protein;protein_id=EGT82571.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 38332 38851 . + . ID=id-GGE_0669;Dbxref=InterPro:IPR010654,PFAM:PF06805;Note=superfamily~lambda_tail_i~bacteriophage lambda tail assembly i%3B label: Lambda_tail_I superfamily;gbkey=misc_feature;locus_tag=GGE_0669 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 38341 38689 . - . ID=id-AFQR01000012.1:38341..38689;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 38341 38593 . - . ID=id-AFQR01000012.1:38341..38593;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 38995 42642 . + . ID=gene-GGE_0670;Name=GGE_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0670 GCA_000222085.2|AFQR01000012.1 Genbank CDS 38995 42642 . + 0 ID=cds-EGT82572.1;Parent=gene-GGE_0670;Dbxref=GeneID:145640045,InterPro:IPR003961,InterPro:IPR008957,InterPro:IPR013783,NCBI_GP:EGT82572.1;Name=EGT82572.1;Note=ZP_01795642;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_0670;product=Putative bacteriophage protein;protein_id=EGT82572.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39010 39034 . + . ID=id-GGE_0670;Note=seg;gbkey=misc_feature;locus_tag=GGE_0670 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39049 41218 . + . ID=id-GGE_0670-2;Note=multi-dom%3B label: COG4733;gbkey=misc_feature;locus_tag=GGE_0670 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39031 42607 . - . ID=id-AFQR01000012.1:39031..42607;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39043 39268 . - . ID=id-AFQR01000012.1:39043..39268;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39190 40918 . - . ID=id-AFQR01000012.1:39190..40918;Dbxref=InterPro:IPR008957,InterPro:IPR013783;Note=superfamily:SSF49265~fibronectin type iii~fibronectin type iii domain~Gene3D:2.60.40.10~immunoglobulin-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39262 41152 . - . ID=id-AFQR01000012.1:39262..41152;Dbxref=InterPro:IPR003961;Note=ProfileScan:PS50853~fn3~fibronectin%2C type iii;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39265 41665 . - . ID=id-AFQR01000012.1:39265..41665;Dbxref=InterPro:IPR003961;Note=ProfileScan:PS50853~fn3~fibronectin%2C type iii;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 39283 40852 . - . ID=id-AFQR01000012.1:39283..40852;Dbxref=InterPro:IPR003961;Note=ProfileScan:PS50853~fn3~fibronectin%2C type iii;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 42653 44377 . + . ID=gene-GGE_0671;Name=GGE_0671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0671 GCA_000222085.2|AFQR01000012.1 Genbank CDS 42653 44377 . + 0 ID=cds-EGT82573.1;Parent=gene-GGE_0671;Dbxref=InterPro:IPR011083,PFAM:PF07484,NCBI_GP:EGT82573.1;Name=EGT82573.1;Note=Hypothetical phage tail collar;gbkey=CDS;locus_tag=GGE_0671;product=putative phage tail collar;protein_id=EGT82573.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 42689 42971 . - . ID=id-AFQR01000012.1:42689..42971;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 42785 43313 . - . ID=id-AFQR01000012.1:42785..43313;Dbxref=InterPro:IPR011083,PFAM:PF07484;Note=collar~phage tail collar;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 42788 43313 . - . ID=id-AFQR01000012.1:42788..43313;Note=superfamily%3B label: Collar superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 42827 43271 . - . ID=id-AFQR01000012.1:42827..43271;Note=superfamily:SSF88874~receptor-binding domain of short tail fibre protein gp12;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 43112 43445 . - . ID=id-AFQR01000012.1:43112..43445;Note=superfamily:SSF88874~receptor-binding domain of short tail fibre protein gp12;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 44377 44991 . + . ID=gene-GGE_0672;Name=GGE_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0672 GCA_000222085.2|AFQR01000012.1 Genbank CDS 44377 44991 . + 0 ID=cds-EGT82574.1;Parent=gene-GGE_0672;Dbxref=GeneID:319896501,InterPro:IPR003458,InterPro:IPR020088,PFAM:PF02413,NCBI_GP:EGT82574.1;Name=EGT82574.1;Note=YP_004134694;gbkey=CDS;locus_tag=GGE_0672;product=Hypothetical protein;protein_id=EGT82574.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44413 44665 . + . ID=id-GGE_0672;Dbxref=InterPro:IPR003458,PFAM:PF02413;Note=caudo_tap~phage tail assembly chaperone gp38;gbkey=misc_feature;locus_tag=GGE_0672 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44434 44917 . - . ID=id-AFQR01000012.1:44434..44917;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44443 44923 . - . ID=id-AFQR01000012.1:44443..44923;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44443 44626 . - . ID=id-AFQR01000012.1:44443..44626;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44509 44785 . - . ID=id-AFQR01000012.1:44509..44785;Dbxref=InterPro:IPR020088;Note=BlastProDom:PD055258~y1402_haein_p44177~uncharacterised protein family hi1402;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 44610 44619 . - . ID=id-AFQR01000012.1:44610..44619;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 44970 45248 . + . ID=gene-GGE_0673;Name=GGE_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0673 GCA_000222085.2|AFQR01000012.1 Genbank CDS 44970 45248 . + 0 ID=cds-EGT82575.1;Parent=gene-GGE_0673;Dbxref=GeneID:301155064,NCBI_GP:EGT82575.1;Name=EGT82575.1;Note=CBW14527;gbkey=CDS;locus_tag=GGE_0673;product=Hypothetical protein;protein_id=EGT82575.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank gene 45747 46466 . + . ID=gene-GGE_0674;Name=GGE_0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank CDS 45747 46466 . + 0 ID=cds-EGT82576.1;Parent=gene-GGE_0674;Dbxref=GeneID:20178339,InterPro:IPR001537,InterPro:IPR004384,PFAM:PF00588,PIR:PIRSF004808,TIGRFAM:TIGR00050,NCBI_GP:EGT82576.1;Name=EGT82576.1;Note=HI_0380;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||,RNA methyltransferase activity|0008173||;go_process=RNA processing|0006396||;locus_tag=GGE_0674;product=putative rNA methyltransferase TrmH%2C group 1;protein_id=EGT82576.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45747 46452 . + . ID=id-GGE_0674;Dbxref=InterPro:IPR004384,TIGRFAM:TIGR00050;Note=rrna_methyl_1: rna methyltransferase%2C t~rna methyltransferase trmh%2C group 1;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45747 46284 . + . ID=id-GGE_0674-2;Note=HMMPanther:PTHR12029:SF27~subfamily not named~HMMPanther:PTHR12029~family not named;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45753 46449 . + . ID=id-GGE_0674-3;Note=multi-dom%3B label: rRNA_methyl_1;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45756 46458 . + . ID=id-GGE_0674-4;Dbxref=InterPro:IPR004384,PIR:PIRSF004808;Note=predicted trna/rrna methyltransferase%2C last type~rna methyltransferase trmh%2C group 1;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45759 46299 . + . ID=id-GGE_0674-5;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45759 46224 . + . ID=id-GGE_0674-6;Note=Gene3D:3.40.1280.10;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45759 46191 . + . ID=id-GGE_0674-7;Note=superfamily%3B label: SpoU_methylase superfamily;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 45762 46188 . + . ID=id-GGE_0674-8;Dbxref=InterPro:IPR001537,PFAM:PF00588;Note=spou_methylase~trna/rrna methyltransferase%2C spou;gbkey=misc_feature;locus_tag=GGE_0674 GCA_000222085.2|AFQR01000012.1 Genbank gene 46523 46978 . + . ID=gene-GGE_0675;Name=GGE_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank CDS 46523 46978 . + 0 ID=cds-EGT82577.1;Parent=gene-GGE_0675;Dbxref=InterPro:IPR000944,InterPro:IPR010242,InterPro:IPR011991,PFAM:PF02082,TIGRFAM:TIGR00738,TIGRFAM:TIGR02010,NCBI_GP:EGT82577.1;Name=EGT82577.1;Note=HI_0379;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;go_function=double-stranded DNA binding|0003690||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0675;product=Putative HTH-type transcriptional regulator;protein_id=EGT82577.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46523 46928 . + . ID=id-GGE_0675;Dbxref=InterPro:IPR010242,TIGRFAM:TIGR02010;Note=iscr: iron-sulfur cluster assembly transcr~isc system fes cluster assembly%2C iscr transcription factor;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46523 46925 . + . ID=id-GGE_0675-2;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46523 46916 . + . ID=id-GGE_0675-3;Dbxref=InterPro:IPR000944,TIGRFAM:TIGR00738;Note=multi-dom~rrf2_super: rrf2 family protein (putative~transcription regulator rrf2%3B label: rrf2_super;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46523 46772 . + . ID=id-GGE_0675-4;Dbxref=InterPro:IPR000944,PFAM:PF02082;Note=rrf2~transcription regulator rrf2;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46529 46925 . + . ID=id-GGE_0675-5;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46529 46913 . + . ID=id-GGE_0675-6;Dbxref=InterPro:IPR000944;Note=ProfileScan:PS51197~hth_rrf2_2~transcription regulator rrf2;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46577 46679 . + . ID=id-GGE_0675-7;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0675 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 46580 46670 . - . ID=id-AFQR01000012.1:46580..46670;Dbxref=InterPro:IPR000944;Note=PatternScan:PS01332~hth_rrf2_1~transcription regulator rrf2;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47011 47020 . + . ID=id-AFQR01000012.1:47011..47020;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 47050 48264 . + . ID=gene-GGE_0676;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank CDS 47050 48264 . + 0 ID=cds-EGT82578.1;Parent=gene-GGE_0676;Dbxref=GeneID:13432196,InterPro:IPR000192,InterPro:IPR010240,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR016454,InterPro:IPR020578,PFAM:PF00266,PIR:PIRSF005572,TIGRFAM:TIGR02006,NCBI_GP:EGT82578.1;Name=EGT82578.1;Ontology_term=GO:0006534,GO:0008152,GO:0003824,GO:0031071,GO:0030170;gbkey=CDS;gene=iscS;go_function=catalytic activity|0003824||,cysteine desulfurase activity|0031071||,pyridoxal phosphate binding|0030170||;go_process=cysteine metabolic process|0006534||,metabolic process|0008152||;locus_tag=GGE_0676;product=Cysteine desulfurase;protein_id=EGT82578.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47050 48262 . + . ID=id-GGE_0676;Dbxref=InterPro:IPR010240,TIGRFAM:TIGR02006;Note=HMMPanther:PTHR11601~family not named~iscs: cysteine desulfurase iscs~cysteine desulfurase;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47050 48202 . + . ID=id-GGE_0676-2;Dbxref=InterPro:IPR016454,PIR:PIRSF005572;Note=cysteine desulphurase%2C nifs type~cysteine desulfurase%2C nifs;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47056 48184 . + . ID=id-GGE_0676-3;Note=multi-dom%3B label: csdA;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47062 48202 . + . ID=id-GGE_0676-4;Dbxref=InterPro:IPR010240;Note=HAMAP:MF_00331~cys_desulf_aminotr_5~cysteine desulfurase;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47062 48184 . + . ID=id-GGE_0676-5;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47065 48142 . + . ID=id-GGE_0676-6;Dbxref=InterPro:IPR000192,PFAM:PF00266;Note=aminotran_5~aminotransferase%2C class v/cysteine desulfurase;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47065 48139 . + . ID=id-GGE_0676-7;Note=superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47092 47770 . + . ID=id-GGE_0676-8;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=iscS;locus_tag=GGE_0676 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47110 47641 . - . ID=id-AFQR01000012.1:47110..47641;Dbxref=InterPro:IPR020578;Note=PatternScan:PS00595~aa_transfer_class_5~aminotransferase class-v pyridoxal-phosphate binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 47413 47812 . - . ID=id-AFQR01000012.1:47413..47812;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 48322 48705 . + . ID=gene-GGE_0677;Name=nifU;gbkey=Gene;gene=nifU;gene_biotype=protein_coding;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank CDS 48322 48705 . + 0 ID=cds-EGT82579.1;Parent=gene-GGE_0677;Dbxref=GeneID:7387940,InterPro:IPR002871,InterPro:IPR011339,PFAM:PF01592,TIGRFAM:TIGR01999,NCBI_GP:EGT82579.1;Name=EGT82579.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;gene=nifU;go_function=iron ion binding|0005506||,iron-sulfur cluster binding|0051536||;go_process=iron-sulfur cluster assembly|0016226||;locus_tag=GGE_0677;product=NifU-like protein;protein_id=EGT82579.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48322 48700 . + . ID=id-GGE_0677;Note=HMMPanther:PTHR10093~iron-sulfur cluster assembly enzyme (nifu homolog)~Gene3D:3.90.1010.10;gbkey=misc_feature;gene=nifU;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48322 48697 . + . ID=id-GGE_0677-2;Note=superfamily:SSF82649~sufe/nifu;gbkey=misc_feature;gene=nifU;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48328 48697 . + . ID=id-GGE_0677-3;Dbxref=InterPro:IPR002871,PFAM:PF01592;Note=nifu_n~nif system fes cluster assembly%2C nifu;gbkey=misc_feature;gene=nifU;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48331 48694 . + . ID=id-GGE_0677-4;Dbxref=InterPro:IPR011339,TIGRFAM:TIGR01999;Note=iscu: fes cluster assembly scaffold iscu~isc system fes cluster assembly%2C iscu scaffold;gbkey=misc_feature;gene=nifU;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48331 48667 . + . ID=id-GGE_0677-5;Note=specific~superfamily%3B label: IscU_like;gbkey=misc_feature;gene=nifU;locus_tag=GGE_0677 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48729 48738 . - . ID=id-AFQR01000012.1:48729..48738;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 48759 49082 . + . ID=gene-GGE_0678;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank CDS 48759 49082 . + 0 ID=cds-EGT82580.1;Parent=gene-GGE_0678;Dbxref=GeneID:1175982,InterPro:IPR000361,InterPro:IPR011302,InterPro:IPR016092,InterPro:IPR017870,PFAM:PF01521,TIGRFAM:TIGR00049,TIGRFAM:TIGR02011,NCBI_GP:EGT82580.1;Name=EGT82580.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536,GO:0005198;gbkey=CDS;gene=iscA;go_function=iron ion binding|0005506||,iron-sulfur cluster binding|0051536||,structural molecule activity|0005198||;go_process=iron-sulfur cluster assembly|0016226||;locus_tag=GGE_0678;product=Iron-binding protein iscA;protein_id=EGT82580.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48759 49050 . + . ID=id-GGE_0678;Dbxref=InterPro:IPR000361;Note=superfamily:SSF89360~hesb-like domain~fes cluster biogenesis;gbkey=misc_feature;gene=iscA;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48759 49038 . + . ID=id-GGE_0678-2;Dbxref=InterPro:IPR000361;Note=Gene3D:2.60.300.12~fes cluster biogenesis;gbkey=misc_feature;gene=iscA;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48765 49077 . + . ID=id-GGE_0678-3;Note=HMMPanther:PTHR10072~iron-sulfur cluster assembly protein;gbkey=misc_feature;gene=iscA;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48768 49074 . + . ID=id-GGE_0678-4;Dbxref=InterPro:IPR011302,InterPro:IPR016092,TIGRFAM:TIGR00049,TIGRFAM:TIGR02011;Note=superfamily~tigr00049: iron-sulfur cluster assembly acc~fes cluster insertion~isca: iron-sulfur cluster assembly protein~isc system fes cluster assembly%2C isca scaffold%3B label: Fe-S_biosyn superfamily;gbkey=misc_feature;gene=iscA;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48768 49032 . + . ID=id-GGE_0678-5;Dbxref=InterPro:IPR000361,PFAM:PF01521;Note=fe-s_biosyn~fes cluster biogenesis;gbkey=misc_feature;gene=iscA;locus_tag=GGE_0678 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 48813 49023 . - . ID=id-AFQR01000012.1:48813..49023;Dbxref=InterPro:IPR017870;Note=PatternScan:PS01152~hesb~fes cluster insertion%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 49095 49616 . + . ID=gene-GGE_0679;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank CDS 49095 49616 . + 0 ID=cds-EGT82581.1;Parent=gene-GGE_0679;Dbxref=InterPro:IPR001623,InterPro:IPR004640,InterPro:IPR009073,PFAM:PF00226,PFAM:PF07743,TIGRFAM:TIGR00714,NCBI_GP:EGT82581.1;Name=EGT82581.1;Ontology_term=GO:0006457,GO:0051087,GO:0031072;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||,heat shock protein binding|0031072||;go_process=protein folding|0006457||;locus_tag=GGE_0679;product=Co-chaperone protein hscB;protein_id=EGT82581.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49095 49563 . + . ID=id-GGE_0679;Note=multi-dom%3B label: hscB;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49101 49605 . + . ID=id-GGE_0679-2;Dbxref=InterPro:IPR004640;Note=HAMAP:MF_00682~hscb~co-chaperone hsc20;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49101 49323 . + . ID=id-GGE_0679-3;Dbxref=InterPro:IPR001623;Note=superfamily:SSF46565~chaperone j-domain~heat shock protein dnaj;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49104 49299 . + . ID=id-GGE_0679-4;Dbxref=InterPro:IPR001623,PFAM:PF00226;Note=superfamily~dnaj~heat shock protein dnaj~Gene3D:1.10.287.110~heat shock protein dnaj%3B label: DnaJ superfamily;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49110 49599 . + . ID=id-GGE_0679-5;Note=HMMPanther:PTHR14021:SF10~co-chaperone protein hscb~HMMPanther:PTHR14021~family not named;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49137 49569 . + . ID=id-GGE_0679-6;Dbxref=InterPro:IPR004640,TIGRFAM:TIGR00714;Note=hscb: fe-s protein assembly co-chaperone hsc~co-chaperone hsc20;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49332 49380 . + . ID=id-GGE_0679-7;Dbxref=InterPro:IPR009073;Note=superfamily:SSF47144~hsc20 (hscb) oligomerisation domain~heat shock cognate protein b oligomerisation;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49347 49359 . + . ID=id-GGE_0679-8;Dbxref=InterPro:IPR009073;Note=Gene3D:1.20.1280.20~heat shock cognate protein b oligomerisation;gbkey=misc_feature;gene=hscB;locus_tag=GGE_0679 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49146 49566 . - . ID=id-AFQR01000012.1:49146..49566;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49146 49473 . - . ID=id-AFQR01000012.1:49146..49473;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49158 49377 . - . ID=id-AFQR01000012.1:49158..49377;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49161 49386 . - . ID=id-AFQR01000012.1:49161..49386;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49329 49359 . - . ID=id-AFQR01000012.1:49329..49359;Dbxref=InterPro:IPR009073,PFAM:PF07743;Note=hscb_c~heat shock cognate protein b oligomerisation;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 49647 50333 . + . ID=gene-GGE_0680;Name=GGE_0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0680 GCA_000222085.2|AFQR01000012.1 Genbank CDS 49647 50333 . + 0 ID=cds-EGT82582.1;Parent=gene-GGE_0680;Dbxref=InterPro:IPR021239,PFAM:PF10946,NCBI_GP:EGT82582.1;Name=EGT82582.1;Note=HI_0374;gbkey=CDS;locus_tag=GGE_0680;product=hypothetical protein;protein_id=EGT82582.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 49659 50271 . + . ID=id-GGE_0680;Dbxref=InterPro:IPR021239,PFAM:PF10946;Note=superfamily~duf2625~protein of unknown function duf2625%3B label: DUF2625 superfamily;gbkey=misc_feature;locus_tag=GGE_0680 GCA_000222085.2|AFQR01000012.1 Genbank gene 50352 52211 . + . ID=gene-GGE_0681;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank CDS 50352 52211 . + 0 ID=cds-EGT82583.1;Parent=gene-GGE_0681;Dbxref=GeneID:1170385,InterPro:IPR001023,InterPro:IPR010236,InterPro:IPR013126,InterPro:IPR018181,PFAM:PF00012,TIGRFAM:TIGR01991,NCBI_GP:EGT82583.1;Name=EGT82583.1;Ontology_term=GO:0016226,GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=hscA;go_function=ATP binding|0005524||,ATPase activity|0016887||,unfolded protein binding|0051082||;go_process=iron-sulfur cluster assembly|0016226||,protein folding|0006457||;locus_tag=GGE_0681;product=Chaperone protein hscA;protein_id=EGT82583.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50352 52200 . + . ID=id-GGE_0681;Dbxref=InterPro:IPR010236;Note=multi-dom~HAMAP:MF_00679~hsca~isc system fes cluster assembly%2C hsca chaperone%3B label: hscA;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50385 52104 . + . ID=id-GGE_0681-2;Dbxref=InterPro:IPR001023;Note=HMMPanther:PTHR19375:SF1~heat shock protein 70 (hsp70)~HMMPanther:PTHR19375~family not named~heat shock protein hsp70;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50406 50895 . + . ID=id-GGE_0681-3;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50415 52137 . + . ID=id-GGE_0681-4;Dbxref=InterPro:IPR010236,TIGRFAM:TIGR01991;Note=hsca: fe-s protein assembly chaperone hsca~isc system fes cluster assembly%2C hsca chaperone;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50415 52089 . + . ID=id-GGE_0681-5;Dbxref=InterPro:IPR013126,PFAM:PF00012;Note=hsp70~heat shock protein 70;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 51192 51201 . + . ID=id-GGE_0681-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hscA;locus_tag=GGE_0681 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50376 50424 . - . ID=id-AFQR01000012.1:50376..50424;Dbxref=InterPro:IPR018181;Note=PatternScan:PS00297~hsp70_1~heat shock protein 70%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50385 50985 . - . ID=id-AFQR01000012.1:50385..50985;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50394 50967 . - . ID=id-AFQR01000012.1:50394..50967;Dbxref=InterPro:IPR018181;Note=PatternScan:PS00329~hsp70_2~heat shock protein 70%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50394 50412 . - . ID=id-AFQR01000012.1:50394..50412;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50397 51345 . - . ID=id-AFQR01000012.1:50397..51345;Dbxref=InterPro:IPR018181;Note=PatternScan:PS01036~hsp70_3~heat shock protein 70%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50397 51036 . - . ID=id-AFQR01000012.1:50397..51036;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50403 51747 . - . ID=id-AFQR01000012.1:50403..51747;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50403 51336 . - . ID=id-AFQR01000012.1:50403..51336;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50412 51504 . - . ID=id-AFQR01000012.1:50412..51504;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50415 51429 . - . ID=id-AFQR01000012.1:50415..51429;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50415 50808 . - . ID=id-AFQR01000012.1:50415..50808;Dbxref=InterPro:IPR001023;Note=FPrintScan:PR00301~heatshock70~heat shock protein hsp70;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50487 51288 . - . ID=id-AFQR01000012.1:50487..51288;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50499 50562 . - . ID=id-AFQR01000012.1:50499..50562;Note=Gene3D:3.30.30.30;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50565 51069 . - . ID=id-AFQR01000012.1:50565..51069;Note=Gene3D:3.90.640.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50592 50748 . - . ID=id-AFQR01000012.1:50592..50748;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50610 51936 . - . ID=id-AFQR01000012.1:50610..51936;Note=Gene3D:1.20.1270.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50691 51861 . - . ID=id-AFQR01000012.1:50691..51861;Note=superfamily:SSF100934~heat shock protein 70kd (hsp70) subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50778 51510 . - . ID=id-AFQR01000012.1:50778..51510;Note=Gene3D:2.60.34.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50826 51489 . - . ID=id-AFQR01000012.1:50826..51489;Note=superfamily:SSF100920~heat shock protein 70kd (hsp70)%2C peptide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 50892 50943 . - . ID=id-AFQR01000012.1:50892..50943;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52210 52219 . + . ID=id-AFQR01000012.1:52210..52219;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 52252 52593 . + . ID=gene-GGE_0682;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank CDS 52252 52593 . + 0 ID=cds-EGT82584.1;Parent=gene-GGE_0682;Dbxref=GeneID:1169674,InterPro:IPR001041,InterPro:IPR001055,InterPro:IPR011536,InterPro:IPR012675,InterPro:IPR018298,PFAM:PF00111,TIGRFAM:TIGR02007,NCBI_GP:EGT82584.1;Name=EGT82584.1;Ontology_term=GO:0051537,GO:0009055,GO:0051536;gbkey=CDS;gene=fdx;go_function=2 iron 2 sulfur cluster binding|0051537||,electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_0682;product=2Fe-2S ferredoxin;protein_id=EGT82584.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52252 52582 . + . ID=id-GGE_0682;Note=HMMPanther:PTHR23426:SF8~subfamily not named~HMMPanther:PTHR23426~family not named;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52258 52582 . + . ID=id-GGE_0682-2;Dbxref=InterPro:IPR011536,TIGRFAM:TIGR02007;Note=fdx_isc: ferredoxin%2C 2fe-2s type%2C isc system~ferredoxin%2C 2fe-2s type;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52258 52561 . + . ID=id-GGE_0682-3;Dbxref=InterPro:IPR001041;Note=ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52258 52552 . + . ID=id-GGE_0682-4;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52267 52564 . + . ID=id-GGE_0682-5;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52294 52510 . + . ID=id-GGE_0682-6;Note=specific~superfamily%3B label: fer2;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52294 52486 . + . ID=id-GGE_0682-7;Dbxref=InterPro:IPR001041,PFAM:PF00111;Note=fer2~ferredoxin;gbkey=misc_feature;gene=fdx;locus_tag=GGE_0682 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52279 52501 . - . ID=id-AFQR01000012.1:52279..52501;Dbxref=InterPro:IPR001055;Note=FPrintScan:PR00355~adrenodoxin~adrenodoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52285 52378 . - . ID=id-AFQR01000012.1:52285..52378;Dbxref=InterPro:IPR001055,InterPro:IPR018298;Note=PatternScan:PS00814~adx~adrenodoxin%2C iron-sulphur binding site~FPrintScan:PR00355~adrenodoxin~adrenodoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52297 52432 . - . ID=id-AFQR01000012.1:52297..52432;Dbxref=InterPro:IPR001055;Note=FPrintScan:PR00355~adrenodoxin~adrenodoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 52593 52787 . + . ID=gene-GGE_0683;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=GGE_0683 GCA_000222085.2|AFQR01000012.1 Genbank CDS 52593 52787 . + 0 ID=cds-EGT82585.1;Parent=gene-GGE_0683;Dbxref=GeneID:1175984,InterPro:IPR007479,PFAM:PF04384,TIGRFAM:TIGR03412,NCBI_GP:EGT82585.1;Name=EGT82585.1;Ontology_term=GO:0016226;gbkey=CDS;gene=iscX;go_process=iron-sulfur cluster assembly|0016226||;locus_tag=GGE_0683;product=Protein iscX;protein_id=EGT82585.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52593 52785 . + . ID=id-GGE_0683;Dbxref=InterPro:IPR007479,PFAM:PF04384;Note=superfamily~duf528~isc system fes cluster assembly%2C iscx~Gene3D:1.10.10.600~isc system fes cluster assembly%2C iscx%3B label: DUF528 superfamily;gbkey=misc_feature;gene=iscX;locus_tag=GGE_0683 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52593 52782 . + . ID=id-GGE_0683-2;Note=superfamily:SSF140319~iscx-like;gbkey=misc_feature;gene=iscX;locus_tag=GGE_0683 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52599 52782 . + . ID=id-GGE_0683-3;Dbxref=InterPro:IPR007479,TIGRFAM:TIGR03412;Note=iscx_yfhj: fes assembly protein iscx~isc system fes cluster assembly%2C iscx;gbkey=misc_feature;gene=iscX;locus_tag=GGE_0683 GCA_000222085.2|AFQR01000012.1 Genbank gene 52838 53452 . - . ID=gene-GGE_0684;Name=GGE_0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0684 GCA_000222085.2|AFQR01000012.1 Genbank CDS 52838 53452 . - 0 ID=cds-EGT82586.1;Parent=gene-GGE_0684;Dbxref=GeneID:1175233,InterPro:IPR018704,PFAM:PF09976,NCBI_GP:EGT82586.1;Name=EGT82586.1;Note=HI_0370;gbkey=CDS;locus_tag=GGE_0684;product=UPF0070 protein;protein_id=EGT82586.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52838 53450 . - . ID=id-GGE_0684;Note=multi-dom%3B label: COG2976;gbkey=misc_feature;locus_tag=GGE_0684 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52865 52961 . - . ID=id-GGE_0684-2;Dbxref=InterPro:IPR018704,PFAM:PF09976;Note=superfamily~duf2133~uncharacterised protein family upf0070%3B label: DUF2133 superfamily;gbkey=misc_feature;locus_tag=GGE_0684 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52877 53387 . + . ID=id-AFQR01000012.1:52877..53387;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52892 52913 . + . ID=id-AFQR01000012.1:52892..52913;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 52904 53384 . + . ID=id-AFQR01000012.1:52904..53384;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 53470 54741 . - . ID=gene-GGE_0685;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank CDS 53470 54741 . - 0 ID=cds-EGT82587.1;Parent=gene-GGE_0685;Dbxref=GeneID:166227972,InterPro:IPR002314,InterPro:IPR004154,InterPro:IPR004516,InterPro:IPR006195,InterPro:IPR015807,PFAM:PF00587,PFAM:PF03129,PIR:PIRSF001549,TIGRFAM:TIGR00442,NCBI_GP:EGT82587.1;Name=EGT82587.1;Ontology_term=GO:0006427,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004821,GO:0000166;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,histidine-tRNA ligase activity|0004821||,nucleotide binding|0000166||;go_process=histidyl-tRNA aminoacylation|0006427||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0685;product=Histidyl-tRNA synthetase;protein_id=EGT82587.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53476 54736 . - . ID=id-GGE_0685;Dbxref=InterPro:IPR004516,PIR:PIRSF001549;Note=histidyl-trna synthetase~histidyl-trna synthetase%2C class iia;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53479 54727 . - . ID=id-GGE_0685-2;Dbxref=InterPro:IPR015807;Note=HAMAP:MF_00127~his_trna_synth~histidyl-trna synthetase%2C class iia%2C subgroup;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53482 54730 . - . ID=id-GGE_0685-3;Dbxref=InterPro:IPR004516;Note=multi-dom~HMMPanther:PTHR11476~family not named~histidyl-trna synthetase%2C class iia%3B label: hisS;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53482 54418 . - . ID=id-GGE_0685-4;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53488 54691 . - . ID=id-GGE_0685-5;Dbxref=InterPro:IPR015807,TIGRFAM:TIGR00442;Note=hiss: histidyl-trna synthetase~histidyl-trna synthetase%2C class iia%2C subgroup;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53524 54367 . - . ID=id-GGE_0685-6;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53533 53941 . - . ID=id-GGE_0685-7;Dbxref=InterPro:IPR002314,PFAM:PF00587;Note=trna-synt_2b~aminoacyl-trna synthetase%2C class ii (g/ h/ p/ s)%2C conserved domain;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53545 54367 . - . ID=id-GGE_0685-8;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53758 53767 . - . ID=id-GGE_0685-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hisS;locus_tag=GGE_0685 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53746 54460 . + . ID=id-AFQR01000012.1:53746..54460;Dbxref=InterPro:IPR004154,PFAM:PF03129;Note=hgtp_anticodon~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53752 54451 . + . ID=id-AFQR01000012.1:53752..54451;Note=specific~superfamily%3B label: HGTP_anticodon superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53758 54445 . + . ID=id-AFQR01000012.1:53758..54445;Dbxref=InterPro:IPR004154;Note=Gene3D:3.40.50.800~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53767 54445 . + . ID=id-AFQR01000012.1:53767..54445;Dbxref=InterPro:IPR004154;Note=superfamily:SSF52954~class ii aars abd-related~anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 53773 54127 . + . ID=id-AFQR01000012.1:53773..54127;Note=Gene3D:3.30.930.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 54751 55857 . - . ID=gene-GGE_0686;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank CDS 54751 55857 . - 0 ID=cds-EGT82588.1;Parent=gene-GGE_0686;Dbxref=GeneID:1169879,InterPro:IPR004588,InterPro:IPR011005,InterPro:IPR013785,InterPro:IPR016425,PFAM:PF04551,PIR:PIRSF004640,TIGRFAM:TIGR00612,NCBI_GP:EGT82588.1;Name=EGT82588.1;Ontology_term=GO:0044237,GO:0008299,GO:0008152,GO:0055114,GO:0016114,GO:0046429,GO:0003824,GO:0005506;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||,catalytic activity|0003824||,iron ion binding|0005506||;go_process=cellular metabolic process|0044237||,isoprenoid biosynthetic process|0008299||,metabolic process|0008152||,oxidation-reduction process|0055114||,terpenoid biosynthetic process|0016114||;locus_tag=GGE_0686;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=EGT82588.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54769 55834 . - . ID=id-GGE_0686;Dbxref=InterPro:IPR016425,PIR:PIRSF004640;Note=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54769 55816 . - . ID=id-GGE_0686-2;Note=multi-dom%3B label: ispG;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54775 55807 . - . ID=id-GGE_0686-3;Dbxref=InterPro:IPR004588;Note=HAMAP:MF_00159~ispg~4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54781 55789 . - . ID=id-GGE_0686-4;Dbxref=InterPro:IPR004588,TIGRFAM:TIGR00612;Note=ispg_gcpe: 4-hydroxy-3-methylbut-2-en-1-yl~4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54781 55777 . - . ID=id-GGE_0686-5;Note=superfamily%3B label: ispG_gcpE superfamily;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54793 55780 . - . ID=id-GGE_0686-6;Dbxref=InterPro:IPR004588,PFAM:PF04551;Note=gcpe~4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54796 55333 . - . ID=id-GGE_0686-7;Dbxref=InterPro:IPR011005;Note=superfamily:SSF51717~dihydropteroate synthetase-like~dihydropteroate synthase-like;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 54826 55078 . - . ID=id-GGE_0686-8;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=ispG;locus_tag=GGE_0686 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 55069 55540 . + . ID=id-AFQR01000012.1:55069..55540;Note=superfamily:SSF56014~sulfite reductase hemoprotein (sirhp)%2C domains 2 and 4;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 55869 56780 . - . ID=gene-GGE_0687;Name=GGE_0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0687 GCA_000222085.2|AFQR01000012.1 Genbank CDS 55869 56780 . - 0 ID=cds-EGT82589.1;Parent=gene-GGE_0687;Dbxref=NCBI_GP:EGT82589.1;Name=EGT82589.1;Note=HI_0367;gbkey=CDS;locus_tag=GGE_0687;product=hypothetical protein;protein_id=EGT82589.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 55881 56001 . - . ID=id-GGE_0687;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0687 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 55896 56640 . - . ID=id-GGE_0687-2;Note=multi-dom%3B label: COG1426;gbkey=misc_feature;locus_tag=GGE_0687 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 55935 56106 . + . ID=id-AFQR01000012.1:55935..56106;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 55938 56193 . + . ID=id-AFQR01000012.1:55938..56193;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 56851 57393 . - . ID=gene-GGE_0688;Name=GGE_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank CDS 56851 57393 . - 0 ID=cds-EGT82590.1;Parent=gene-GGE_0688;Dbxref=InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013360,TIGRFAM:TIGR02521,NCBI_GP:EGT82590.1;Name=EGT82590.1;Note=HI_0366;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_0688;product=putative tetratricopeptide repeat-containing;protein_id=EGT82590.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56851 56911 . - . ID=id-GGE_0688;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56878 57367 . - . ID=id-GGE_0688-2;Dbxref=InterPro:IPR013360,TIGRFAM:TIGR02521;Note=type_iv_pilw: type iv pilus biogenesis/s~pilus biogenesis/stability type iv%2C pilw;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56878 57361 . - . ID=id-GGE_0688-3;Note=multi-dom%3B label: type_IV_pilW;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56941 57253 . - . ID=id-GGE_0688-4;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56953 57274 . - . ID=id-GGE_0688-5;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56956 57271 . - . ID=id-GGE_0688-6;Note=HMMPanther:PTHR23083~family not named;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56956 57157 . - . ID=id-GGE_0688-7;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56971 57076 . - . ID=id-GGE_0688-8;Note=superfamily%3B label: TPR superfamily;gbkey=misc_feature;locus_tag=GGE_0688 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 56896 57199 . + . ID=id-AFQR01000012.1:56896..57199;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 57498 58670 . - . ID=gene-GGE_0689;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank CDS 57498 58670 . - 0 ID=cds-EGT82591.1;Parent=gene-GGE_0689;Dbxref=GeneID:81336620,InterPro:IPR004383,InterPro:IPR007197,PFAM:PF04055,PIR:PIRSF006004,TIGRFAM:TIGR00048,NCBI_GP:EGT82591.1;Name=EGT82591.1;Ontology_term=GO:0006364,GO:0005737,GO:0008173,GO:0003824,GO:0051536;gbkey=CDS;gene=rlmN;go_component=cytoplasm|0005737||;go_function=RNA methyltransferase activity|0008173||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||;go_process=rRNA processing|0006364||;locus_tag=GGE_0689;product=Ribosomal RNA large subunit methyltransferase N;protein_id=EGT82591.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57537 58599 . - . ID=id-GGE_0689;Dbxref=InterPro:IPR004383,PIR:PIRSF006004;Note=predicted radical sam enzyme%2C cfr type~ribosomal rna large subunit methyltransferase rlmn;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57555 58569 . - . ID=id-GGE_0689-2;Dbxref=InterPro:IPR004383,TIGRFAM:TIGR00048;Note=tigr00048: radical sam enzyme%2C cfr family~ribosomal rna large subunit methyltransferase rlmn;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57558 58608 . - . ID=id-GGE_0689-3;Note=multi-dom%3B label: PRK11194;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57564 58542 . - . ID=id-GGE_0689-4;Dbxref=InterPro:IPR004383;Note=HAMAP:MF_01849~23srrna_methyltr_n~ribosomal rna large subunit methyltransferase rlmn;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57861 58197 . - . ID=id-GGE_0689-5;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57873 58002 . - . ID=id-GGE_0689-6;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57885 58101 . - . ID=id-GGE_0689-7;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=rlmN;locus_tag=GGE_0689 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 57993 58050 . + . ID=id-AFQR01000012.1:57993..58050;Note=Gene3D:3.80.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58802 58811 . - . ID=id-AFQR01000012.1:58802..58811;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58852 58861 . + . ID=id-AFQR01000012.1:58852..58861;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 58962 59774 . + . ID=gene-GGE_0690;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank CDS 58962 59774 . + 0 ID=cds-EGT82592.1;Parent=gene-GGE_0690;Dbxref=InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR018044,PFAM:PF00768,NCBI_GP:EGT82592.1;Name=EGT82592.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||;go_process=proteolysis|0006508||;locus_tag=GGE_0690;product=D-alanyl-D-alanine endopeptidase;protein_id=EGT82592.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58962 59673 . + . ID=id-GGE_0690;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=pbpG;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58962 59634 . + . ID=id-GGE_0690-2;Note=Gene3D:3.40.710.10;gbkey=misc_feature;gene=pbpG;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58962 59571 . + . ID=id-GGE_0690-3;Note=superfamily%3B label: Beta-lactamase superfamily;gbkey=misc_feature;gene=pbpG;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58971 59559 . + . ID=id-GGE_0690-4;Dbxref=InterPro:IPR001967,PFAM:PF00768;Note=peptidase_s11~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature;gene=pbpG;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59172 59349 . + . ID=id-GGE_0690-5;Note=HMMPanther:PTHR21581~family not named;gbkey=misc_feature;gene=pbpG;locus_tag=GGE_0690 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58995 59322 . - . ID=id-AFQR01000012.1:58995..59322;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58998 59601 . - . ID=id-AFQR01000012.1:58998..59601;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 58998 59028 . - . ID=id-AFQR01000012.1:58998..59028;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59004 59259 . - . ID=id-AFQR01000012.1:59004..59259;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59016 59178 . - . ID=id-AFQR01000012.1:59016..59178;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 59886 60314 . - . ID=gene-GGE_0691;Name=GGE_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0691 GCA_000222085.2|AFQR01000012.1 Genbank CDS 59886 60314 . - 0 ID=cds-EGT82593.1;Parent=gene-GGE_0691;Dbxref=GeneID:68248966,NCBI_GP:EGT82593.1;Name=EGT82593.1;Note=YP_248078;gbkey=CDS;locus_tag=GGE_0691;product=putative lipoprotein;protein_id=EGT82593.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59886 59940 . - . ID=id-GGE_0691;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0691 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59943 60141 . - . ID=id-GGE_0691-2;Note=multi-dom%3B label: PRK12472;gbkey=misc_feature;locus_tag=GGE_0691 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 59934 60198 . + . ID=id-AFQR01000012.1:59934..60198;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 60674 61555 . + . ID=gene-GGE_0692;Name=GGE_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0692 GCA_000222085.2|AFQR01000012.1 Genbank CDS 60674 61555 . + 0 ID=cds-EGT82594.1;Parent=gene-GGE_0692;Dbxref=GeneID:14195456,InterPro:IPR006127,InterPro:IPR006128,InterPro:IPR006129,PFAM:PF01297,NCBI_GP:EGT82594.1;Name=EGT82594.1;Note=HI_0362;Ontology_term=GO:0007155,GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||;go_process=cell adhesion|0007155||,metal ion transport|0030001||;locus_tag=GGE_0692;product=putative adhesion lipoprotein;protein_id=EGT82594.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60698 61529 . + . ID=id-GGE_0692;Note=specific~superfamily%3B label: PsaA;gbkey=misc_feature;locus_tag=GGE_0692 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60704 61520 . + . ID=id-GGE_0692-2;Dbxref=InterPro:IPR006127,PFAM:PF01297;Note=sbp_bac_9~abc transporter%2C metal-binding lipoprotein;gbkey=misc_feature;locus_tag=GGE_0692 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60722 61139 . + . ID=id-GGE_0692-3;Note=Gene3D:3.40.50.1980;gbkey=misc_feature;locus_tag=GGE_0692 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60740 61490 . + . ID=id-GGE_0692-4;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature;locus_tag=GGE_0692 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60716 60836 . - . ID=id-AFQR01000012.1:60716..60836;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60728 61355 . - . ID=id-AFQR01000012.1:60728..61355;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60728 61208 . - . ID=id-AFQR01000012.1:60728..61208;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60728 60875 . - . ID=id-AFQR01000012.1:60728..60875;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60731 61421 . - . ID=id-AFQR01000012.1:60731..61421;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60731 61367 . - . ID=id-AFQR01000012.1:60731..61367;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60731 61286 . - . ID=id-AFQR01000012.1:60731..61286;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60731 60818 . - . ID=id-AFQR01000012.1:60731..60818;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60731 60743 . - . ID=id-AFQR01000012.1:60731..60743;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60734 61445 . - . ID=id-AFQR01000012.1:60734..61445;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60734 60875 . - . ID=id-AFQR01000012.1:60734..60875;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60740 61208 . - . ID=id-AFQR01000012.1:60740..61208;Dbxref=InterPro:IPR006128;Note=FPrintScan:PR00690~adhesnfamily~adhesion lipoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 60740 60743 . - . ID=id-AFQR01000012.1:60740..60743;Dbxref=InterPro:IPR006129;Note=FPrintScan:PR00691~adhesinb~adhesin b;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61040 61187 . - . ID=id-AFQR01000012.1:61040..61187;Note=Gene3D:3.40.50.1980;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 61555 62475 . + . ID=gene-GGE_0693;Name=GGE_0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank CDS 61555 62475 . + 0 ID=cds-EGT82595.1;Parent=gene-GGE_0693;Dbxref=GeneID:1169664,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT82595.1;Name=EGT82595.1;Note=HI_0361;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0693;product=Putative iron transport system ATP-binding protein;protein_id=EGT82595.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61570 62362 . + . ID=id-GGE_0693;Note=multi-dom%3B label: PRK15056;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61573 62263 . + . ID=id-GGE_0693-2;Note=HMMPanther:PTHR24220:SF73~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61579 62263 . + . ID=id-GGE_0693-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61579 62242 . + . ID=id-GGE_0693-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61579 62218 . + . ID=id-GGE_0693-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61582 62203 . + . ID=id-GGE_0693-6;Note=specific~superfamily%3B label: ABC_Metallic_Cations;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61633 62323 . + . ID=id-GGE_0693-7;Note=multi-dom%3B label: ZnuC;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61633 62284 . + . ID=id-GGE_0693-8;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61633 62278 . + . ID=id-GGE_0693-9;Note=HMMPanther:PTHR24220:SF73~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61633 62227 . + . ID=id-GGE_0693-10;Note=specific~superfamily%3B label: ABC_Metallic_Cations;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61639 62260 . + . ID=id-GGE_0693-11;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61639 62215 . + . ID=id-GGE_0693-12;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61699 62005 . + . ID=id-GGE_0693-13;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61699 61927 . + . ID=id-GGE_0693-14;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62446 62455 . + . ID=id-GGE_0693-15;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0693 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61600 61987 . - . ID=id-AFQR01000012.1:61600..61987;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 61678 61987 . - . ID=id-AFQR01000012.1:61678..61987;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 62479 63327 . + . ID=gene-GGE_0694;Name=GGE_0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank CDS 62479 63327 . + 0 ID=cds-EGT82596.1;Parent=gene-GGE_0694;Dbxref=GeneID:1175231,InterPro:IPR001626,PFAM:PF00950,NCBI_GP:EGT82596.1;Name=EGT82596.1;Note=HI_0360;Ontology_term=GO:0006810,GO:0016020,GO:0005524,GO:0042626;gbkey=CDS;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||;go_process=transport|0006810||;locus_tag=GGE_0694;product=Putative iron transport system membrane protein;protein_id=EGT82596.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62494 63247 . + . ID=id-GGE_0694;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62509 63247 . + . ID=id-GGE_0694-2;Dbxref=InterPro:IPR001626,PFAM:PF00950;Note=abc-3~abc-3;gbkey=misc_feature;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62521 63229 . + . ID=id-GGE_0694-3;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62542 62548 . + . ID=id-GGE_0694-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62644 63046 . + . ID=id-GGE_0694-5;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;locus_tag=GGE_0694 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62527 62917 . - . ID=id-AFQR01000012.1:62527..62917;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62527 62677 . - . ID=id-AFQR01000012.1:62527..62677;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62536 62884 . - . ID=id-AFQR01000012.1:62536..62884;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62539 63220 . - . ID=id-AFQR01000012.1:62539..63220;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62548 63142 . - . ID=id-AFQR01000012.1:62548..63142;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62548 63055 . - . ID=id-AFQR01000012.1:62548..63055;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62548 62977 . - . ID=id-AFQR01000012.1:62548..62977;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62548 62758 . - . ID=id-AFQR01000012.1:62548..62758;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 62548 62653 . - . ID=id-AFQR01000012.1:62548..62653;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 63320 64135 . + . ID=gene-GGE_0695;Name=GGE_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank CDS 63320 64135 . + 0 ID=cds-EGT82597.1;Parent=gene-GGE_0695;Dbxref=GeneID:301169062,InterPro:IPR001626,PFAM:PF00950,NCBI_GP:EGT82597.1;Name=EGT82597.1;Note=CBW28659;Ontology_term=GO:0006810,GO:0016020,GO:0005524,GO:0042626;gbkey=CDS;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||;go_process=transport|0006810||;locus_tag=GGE_0695;product=putative ABC-type chelated iron transport system%2C permease component;protein_id=EGT82597.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63329 64112 . + . ID=id-GGE_0695;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63350 64088 . + . ID=id-GGE_0695-2;Dbxref=InterPro:IPR001626,PFAM:PF00950;Note=abc-3~abc-3;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63362 64070 . + . ID=id-GGE_0695-3;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63383 63389 . + . ID=id-GGE_0695-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63485 63953 . + . ID=id-GGE_0695-5;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63728 63737 . + . ID=id-GGE_0695-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0695 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63374 64064 . - . ID=id-AFQR01000012.1:63374..64064;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63374 63725 . - . ID=id-AFQR01000012.1:63374..63725;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63389 63983 . - . ID=id-AFQR01000012.1:63389..63983;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63389 63872 . - . ID=id-AFQR01000012.1:63389..63872;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63389 63599 . - . ID=id-AFQR01000012.1:63389..63599;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 63389 63494 . - . ID=id-AFQR01000012.1:63389..63494;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 64541 65611 . - . ID=gene-GGE_0696;Name=GGE_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank CDS 64541 65611 . - 0 ID=cds-EGT82598.1;Parent=gene-GGE_0696;Dbxref=GeneID:319898107,InterPro:IPR001702,PFAM:PF00267,NCBI_GP:EGT82598.1;Name=EGT82598.1;Note=YP_004136304;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0696;product=outer membrane protein p2;protein_id=EGT82598.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64541 65611 . - . ID=id-GGE_0696;Note=VFDB hit~VFDB:VFG0336;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64556 64601 . - . ID=id-GGE_0696-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64559 64589 . - . ID=id-GGE_0696-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64604 65549 . - . ID=id-GGE_0696-4;Dbxref=InterPro:IPR001702;Note=superfamily:SSF56935~porins~Gene3D:2.40.160.10~porin%2C gram-negative type;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64628 65525 . - . ID=id-GGE_0696-5;Note=specific~superfamily%3B label: gram_neg_porins;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64655 65495 . - . ID=id-GGE_0696-6;Dbxref=InterPro:IPR001702,PFAM:PF00267;Note=porin_1~porin%2C gram-negative type;gbkey=misc_feature;locus_tag=GGE_0696 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 64574 65315 . + . ID=id-AFQR01000012.1:64574..65315;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 66046 66339 . - . ID=gene-GGE_0697;Name=GGE_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank CDS 66046 66339 . - 0 ID=cds-EGT82599.1;Parent=gene-GGE_0697;Dbxref=GeneID:148825594,InterPro:IPR002156,InterPro:IPR012337,PFAM:PF00075,NCBI_GP:EGT82599.1;Name=EGT82599.1;Note=YP_001290347;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||,ribonuclease H activity|0004523||;locus_tag=GGE_0697;product=ribonuclease H;protein_id=EGT82599.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66046 66337 . - . ID=id-GGE_0697;Dbxref=InterPro:IPR002156;Note=ProfileScan:PS50879~rnase_h~ribonuclease h domain;gbkey=misc_feature;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66046 66307 . - . ID=id-GGE_0697-2;Note=HMMPanther:PTHR10642~ribonuclease h1;gbkey=misc_feature;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66052 66304 . - . ID=id-GGE_0697-3;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like~Gene3D:3.30.420.10;gbkey=misc_feature;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66055 66292 . - . ID=id-GGE_0697-4;Dbxref=InterPro:IPR002156,PFAM:PF00075;Note=rnaseh~ribonuclease h domain;gbkey=misc_feature;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66058 66298 . - . ID=id-GGE_0697-5;Note=specific~superfamily%3B label: RNase_H superfamily;gbkey=misc_feature;locus_tag=GGE_0697 GCA_000222085.2|AFQR01000012.1 Genbank gene 66400 67170 . + . ID=gene-GGE_0698;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank CDS 66400 67170 . + 0 ID=cds-EGT82600.1;Parent=gene-GGE_0698;Dbxref=GeneID:1169396,InterPro:IPR006054,InterPro:IPR006309,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,TIGRFAM:TIGR00573,TIGRFAM:TIGR01406,NCBI_GP:EGT82600.1;Name=EGT82600.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0003676;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||,nucleic acid binding|0003676||;go_process=DNA replication|0006260||;locus_tag=GGE_0698;product=DNA polymerase III subunit epsilon;protein_id=EGT82600.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66409 66940 . + . ID=id-GGE_0698;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66415 67075 . + . ID=id-GGE_0698-2;Dbxref=InterPro:IPR006054,TIGRFAM:TIGR00573;Note=multi-dom~dnaq: exonuclease%2C dna polymerase iii%2C ep~dna polymerase iii%2C epsilon subunit%3B label: dnaq;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66415 66949 . + . ID=id-GGE_0698-3;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66418 67129 . + . ID=id-GGE_0698-4;Dbxref=InterPro:IPR006309,TIGRFAM:TIGR01406;Note=dnaq_proteo: dna polymerase iii%2C epsilon~dna polymerase 3%2C epsilon subunit;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66421 66913 . + . ID=id-GGE_0698-5;Note=specific~superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66424 66907 . + . ID=id-GGE_0698-6;Note=HMMPanther:PTHR23044:SF10~subfamily not named~HMMPanther:PTHR23044~family not named;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66424 66898 . + . ID=id-GGE_0698-7;Dbxref=InterPro:IPR013520,PFAM:PF00929;Note=exonuc_x-t~exonuclease%2C rnase t/dna polymerase iii;gbkey=misc_feature;gene=dnaQ;locus_tag=GGE_0698 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 66445 66958 . - . ID=id-AFQR01000012.1:66445..66958;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 67853 69364 . + . ID=gene-GGE_0699;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank CDS 67853 69364 . + 0 ID=cds-EGT82601.1;Parent=gene-GGE_0699;Dbxref=GeneID:1175159,InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR015946,InterPro:IPR016484,PFAM:PF01926,PIR:PIRSF006485,TIGRFAM:TIGR00231,TIGRFAM:TIGR03594,NCBI_GP:EGT82601.1;Name=EGT82601.1;Ontology_term=GO:0005622,GO:0005525;gbkey=CDS;gene=der;go_component=intracellular|0005622||;go_function=GTP binding|0005525||;locus_tag=GGE_0699;product=GTPase Der;protein_id=EGT82601.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67853 69284 . + . ID=id-GGE_0699;Dbxref=InterPro:IPR016484,PIR:PIRSF006485;Note=gtp-binding protein enga~gtp-binding%2C enga;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67853 69266 . + . ID=id-GGE_0699-2;Note=HMMPanther:PTHR11649:SF5~gtp-binding protein enga~HMMPanther:PTHR11649~family not named;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67853 68339 . + . ID=id-GGE_0699-3;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein doma~small gtp-binding protein;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67859 68369 . + . ID=id-GGE_0699-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67862 69266 . + . ID=id-GGE_0699-5;Dbxref=InterPro:IPR016484;Note=HAMAP:MF_00195~gtpase_der~gtp-binding%2C enga;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67865 69293 . + . ID=id-GGE_0699-6;Note=multi-dom%3B label: PRK00093;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67865 69254 . + . ID=id-GGE_0699-7;Dbxref=InterPro:IPR016484,TIGRFAM:TIGR03594;Note=gtpase_enga: ribosome-associated gtpase e~gtp-binding%2C enga;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67865 68387 . + . ID=id-GGE_0699-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67871 67916 . + . ID=id-GGE_0699-9;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67874 68327 . + . ID=id-GGE_0699-10;Note=specific~superfamily%3B label: EngA1;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67898 68174 . + . ID=id-GGE_0699-11;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68399 68741 . + . ID=id-GGE_0699-12;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=der;locus_tag=GGE_0699 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67910 68072 . - . ID=id-AFQR01000012.1:67910..68072;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 67952 68387 . - . ID=id-AFQR01000012.1:67952..68387;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68081 69041 . - . ID=id-AFQR01000012.1:68081..69041;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~ky domain-like%2C alpha/beta;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68180 68531 . - . ID=id-AFQR01000012.1:68180..68531;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68366 68489 . - . ID=id-AFQR01000012.1:68366..68489;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein doma~small gtp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68369 68492 . - . ID=id-AFQR01000012.1:68369..68492;Note=specific~superfamily%3B label: EngA2;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 68414 68480 . - . ID=id-AFQR01000012.1:68414..68480;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69426 69435 . + . ID=id-AFQR01000012.1:69426..69435;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 69444 70634 . - . ID=gene-GGE_0700;Name=sotB;gbkey=Gene;gene=sotB;gene_biotype=protein_coding;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank CDS 69444 70634 . - 0 ID=cds-EGT82602.1;Parent=gene-GGE_0700;Dbxref=GeneID:1175761,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR023495,PFAM:PF07690,NCBI_GP:EGT82602.1;Name=EGT82602.1;Ontology_term=GO:0055085;gbkey=CDS;gene=sotB;go_process=transmembrane transport|0055085||;locus_tag=GGE_0700;product=Putative sugar efflux transporter;protein_id=EGT82602.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69444 70614 . - . ID=id-GGE_0700;Dbxref=InterPro:IPR023495;Note=HAMAP:MF_00517~mfs_sotb~sugar efflux transporter%2C putative;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69444 70611 . - . ID=id-GGE_0700-2;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69465 70608 . - . ID=id-GGE_0700-3;Note=multi-dom%3B label: PRK03545;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69468 70005 . - . ID=id-GGE_0700-4;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69483 69513 . - . ID=id-GGE_0700-5;Note=transmembrane_regions;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69486 70569 . - . ID=id-GGE_0700-6;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69489 70566 . - . ID=id-GGE_0700-7;Note=HMMPanther:PTHR24003:SF146~subfamily not named~HMMPanther:PTHR24003~family not named;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69489 70542 . - . ID=id-GGE_0700-8;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69501 70404 . - . ID=id-GGE_0700-9;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;gene=sotB;locus_tag=GGE_0700 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69474 69684 . + . ID=id-AFQR01000012.1:69474..69684;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69483 70284 . + . ID=id-AFQR01000012.1:69483..70284;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69483 70050 . + . ID=id-AFQR01000012.1:69483..70050;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69498 70272 . + . ID=id-AFQR01000012.1:69498..70272;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 70539 . + . ID=id-AFQR01000012.1:69513..70539;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 70443 . + . ID=id-AFQR01000012.1:69513..70443;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 70338 . + . ID=id-AFQR01000012.1:69513..70338;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 70185 . + . ID=id-AFQR01000012.1:69513..70185;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 70074 . + . ID=id-AFQR01000012.1:69513..70074;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 69942 . + . ID=id-AFQR01000012.1:69513..69942;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 69861 . + . ID=id-AFQR01000012.1:69513..69861;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 69759 . + . ID=id-AFQR01000012.1:69513..69759;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 69681 . + . ID=id-AFQR01000012.1:69513..69681;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69513 69594 . + . ID=id-AFQR01000012.1:69513..69594;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 69957 70077 . + . ID=id-AFQR01000012.1:69957..70077;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 70634 71809 . - . ID=gene-GGE_0701;Name=GGE_0701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0701 GCA_000222085.2|AFQR01000012.1 Genbank CDS 70634 71809 . - 0 ID=cds-EGT82603.1;Parent=gene-GGE_0701;Dbxref=GeneID:1175158,NCBI_GP:EGT82603.1;Name=EGT82603.1;Note=HI_0134;gbkey=CDS;locus_tag=GGE_0701;product=hypothetical protein;protein_id=EGT82603.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 70646 70913 . - . ID=id-GGE_0701;Note=multi-dom%3B label: TIGR03545;gbkey=misc_feature;locus_tag=GGE_0701 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 70649 70694 . - . ID=id-GGE_0701-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0701 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71168 71177 . - . ID=id-GGE_0701-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0701 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 70676 71528 . + . ID=id-AFQR01000012.1:70676..71528;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 71813 72400 . - . ID=gene-GGE_0702;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank CDS 71813 72400 . - 0 ID=cds-EGT82604.1;Parent=gene-GGE_0702;Dbxref=GeneID:166225800,InterPro:IPR010550,InterPro:IPR011962,PFAM:PF06559,TIGRFAM:TIGR02274,NCBI_GP:EGT82604.1;Name=EGT82604.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||;go_process=dUTP biosynthetic process|0006229||;locus_tag=GGE_0702;product=Deoxycytidine triphosphate deaminase;protein_id=EGT82604.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71813 72392 . - . ID=id-GGE_0702;Note=superfamily:SSF51283~dutpase-like;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71813 72389 . - . ID=id-GGE_0702-2;Note=Gene3D:2.70.40.10;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71813 72383 . - . ID=id-GGE_0702-3;Dbxref=InterPro:IPR011962;Note=HAMAP:MF_00146~dctp_deaminase~deoxycytidine triphosphate deaminase;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71819 72380 . - . ID=id-GGE_0702-4;Dbxref=InterPro:IPR011962,TIGRFAM:TIGR02274;Note=dctp_deam: deoxycytidine triphosphate deami~deoxycytidine triphosphate deaminase;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71822 72221 . - . ID=id-GGE_0702-5;Note=multi-dom%3B label: DCD;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71822 72215 . - . ID=id-GGE_0702-6;Dbxref=InterPro:IPR010550,PFAM:PF06559;Note=dcd~deoxycytidine triphosphate deaminase%2C bacterial;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 71843 71852 . - . ID=id-GGE_0702-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72044 72065 . - . ID=id-GGE_0702-8;Note=specific~superfamily%3B label: trimeric_dUTPase;gbkey=misc_feature;gene=dcd;locus_tag=GGE_0702 GCA_000222085.2|AFQR01000012.1 Genbank gene 72409 73050 . - . ID=gene-GGE_0703;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank CDS 72409 73050 . - 0 ID=cds-EGT82605.1;Parent=gene-GGE_0703;Dbxref=GeneID:1174909,InterPro:IPR000764,InterPro:IPR006083,PFAM:PF00485,TIGRFAM:TIGR00235,NCBI_GP:EGT82605.1;Name=EGT82605.1;Ontology_term=GO:0008152,GO:0005524,GO:0016301,GO:0016773;gbkey=CDS;gene=udk;go_function=ATP binding|0005524||,kinase activity|0016301||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=metabolic process|0008152||;locus_tag=GGE_0703;product=Uridine kinase;protein_id=EGT82605.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72409 73042 . - . ID=id-GGE_0703;Dbxref=InterPro:IPR000764,TIGRFAM:TIGR00235;Note=udk: uridine kinase~uridine kinase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72418 73036 . - . ID=id-GGE_0703-2;Dbxref=InterPro:IPR000764;Note=HAMAP:MF_00551~uridine_kinase~uridine kinase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72418 73012 . - . ID=id-GGE_0703-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72427 72463 . - . ID=id-GGE_0703-4;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72430 72994 . - . ID=id-GGE_0703-5;Note=HMMPanther:PTHR10285~uridine kinase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72430 72466 . - . ID=id-GGE_0703-6;Note=seg;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72433 73000 . - . ID=id-GGE_0703-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72433 72979 . - . ID=id-GGE_0703-8;Dbxref=InterPro:IPR006083,PFAM:PF00485;Note=prk~phosphoribulokinase/uridine kinase;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72487 72961 . - . ID=id-GGE_0703-9;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=udk;locus_tag=GGE_0703 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72442 72832 . + . ID=id-AFQR01000012.1:72442..72832;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72445 72874 . + . ID=id-AFQR01000012.1:72445..72874;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72445 72529 . + . ID=id-AFQR01000012.1:72445..72529;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72451 72940 . + . ID=id-AFQR01000012.1:72451..72940;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 72457 72664 . + . ID=id-AFQR01000012.1:72457..72664;Dbxref=InterPro:IPR000764;Note=FPrintScan:PR00988~uridinkinase~uridine kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 73216 74256 . + . ID=gene-GGE_0704;Name=GGE_0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank CDS 73216 74256 . + 0 ID=cds-EGT82606.1;Parent=gene-GGE_0704;Dbxref=GeneID:1175157,InterPro:IPR006059,PFAM:PF01547,NCBI_GP:EGT82606.1;Name=EGT82606.1;Note=HI_0131;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0704;product=putative bacterial extracellular solute-binding%2C family 1;protein_id=EGT82606.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73234 73276 . + . ID=id-GGE_0704;Note=seg;gbkey=misc_feature;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73294 74164 . + . ID=id-GGE_0704-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73351 74119 . + . ID=id-GGE_0704-3;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73354 73939 . + . ID=id-GGE_0704-4;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73612 73633 . + . ID=id-GGE_0704-5;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_0704 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 73396 74029 . - . ID=id-AFQR01000012.1:73396..74029;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74293 74302 . - . ID=id-AFQR01000012.1:74293..74302;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 74379 75413 . + . ID=gene-GGE_0705;Name=GGE_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank CDS 74379 75413 . + 0 ID=cds-EGT82607.1;Parent=gene-GGE_0705;Dbxref=GeneID:251792916,InterPro:IPR006059,PFAM:PF01547,NCBI_GP:EGT82607.1;Name=EGT82607.1;Note=YP_003007642;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0705;product=TbpA protein;protein_id=EGT82607.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74409 74415 . + . ID=id-GGE_0705;Note=seg;gbkey=misc_feature;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74466 75315 . + . ID=id-GGE_0705-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74520 75270 . + . ID=id-GGE_0705-3;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74520 75093 . + . ID=id-GGE_0705-4;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74772 74793 . + . ID=id-GGE_0705-5;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_0705 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 74553 75186 . - . ID=id-AFQR01000012.1:74553..75186;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 75435 77534 . + . ID=gene-GGE_0706;Name=fbpB;gbkey=Gene;gene=fbpB;gene_biotype=protein_coding;locus_tag=GGE_0706 GCA_000222085.2|AFQR01000012.1 Genbank CDS 75435 77534 . + 0 ID=cds-EGT82608.1;Parent=gene-GGE_0706;Dbxref=InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT82608.1;Name=EGT82608.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=fbpB;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0706;product=Ferric transport system permease protein fbpB;protein_id=EGT82608.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75897 76200 . + . ID=id-GGE_0706;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=fbpB;locus_tag=GGE_0706 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75930 76995 . + . ID=id-GGE_0706-2;Note=multi-dom%3B label: ThiP;gbkey=misc_feature;gene=fbpB;locus_tag=GGE_0706 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 76035 76053 . + . ID=id-GGE_0706-3;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=fbpB;locus_tag=GGE_0706 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75471 77268 . - . ID=id-AFQR01000012.1:75471..77268;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75471 75825 . - . ID=id-AFQR01000012.1:75471..75825;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75480 76605 . - . ID=id-AFQR01000012.1:75480..76605;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75480 76050 . - . ID=id-AFQR01000012.1:75480..76050;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75486 75879 . - . ID=id-AFQR01000012.1:75486..75879;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75489 75720 . - . ID=id-AFQR01000012.1:75489..75720;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75492 77337 . - . ID=id-AFQR01000012.1:75492..77337;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75495 77103 . - . ID=id-AFQR01000012.1:75495..77103;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75495 76518 . - . ID=id-AFQR01000012.1:75495..76518;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75495 75498 . - . ID=id-AFQR01000012.1:75495..75498;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 77421 . - . ID=id-AFQR01000012.1:75504..77421;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 77250 . - . ID=id-AFQR01000012.1:75504..77250;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 77016 . - . ID=id-AFQR01000012.1:75504..77016;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76920 . - . ID=id-AFQR01000012.1:75504..76920;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76743 . - . ID=id-AFQR01000012.1:75504..76743;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76596 . - . ID=id-AFQR01000012.1:75504..76596;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76422 . - . ID=id-AFQR01000012.1:75504..76422;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76275 . - . ID=id-AFQR01000012.1:75504..76275;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76149 . - . ID=id-AFQR01000012.1:75504..76149;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 76044 . - . ID=id-AFQR01000012.1:75504..76044;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 75885 . - . ID=id-AFQR01000012.1:75504..75885;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 75783 . - . ID=id-AFQR01000012.1:75504..75783;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75504 75615 . - . ID=id-AFQR01000012.1:75504..75615;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75731 75740 . - . ID=id-AFQR01000012.1:75731..75740;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75927 76098 . - . ID=id-AFQR01000012.1:75927..76098;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 75969 76956 . - . ID=id-AFQR01000012.1:75969..76956;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 76002 76908 . - . ID=id-AFQR01000012.1:76002..76908;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 76008 76908 . - . ID=id-AFQR01000012.1:76008..76908;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 76011 76083 . - . ID=id-AFQR01000012.1:76011..76083;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 76179 76755 . - . ID=id-AFQR01000012.1:76179..76755;Note=Gene3D:1.10.3720.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 77559 78608 . + . ID=gene-GGE_0707;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank CDS 77559 78608 . + 0 ID=cds-EGT82609.1;Parent=gene-GGE_0707;Dbxref=InterPro:IPR003439,InterPro:IPR008995,InterPro:IPR013611,InterPro:IPR015853,InterPro:IPR017871,PFAM:PF00005,PFAM:PF08402,NCBI_GP:EGT82609.1;Name=EGT82609.1;Ontology_term=GO:0006810,GO:0043190,GO:0016020,GO:0005524,GO:0016887,GO:0016820,GO:0005215;gbkey=CDS;gene=fbpC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0707;product=Fe3+ ions import ATP-binding protein FbpC;protein_id=EGT82609.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77559 78606 . + . ID=id-GGE_0707;Note=multi-dom%3B label: fbpC;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77565 78270 . + . ID=id-GGE_0707-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77571 78510 . + . ID=id-GGE_0707-3;Note=HMMPanther:PTHR24220:SF85~fe(3+) ions import atp-binding protein fbpc~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77577 78255 . + . ID=id-GGE_0707-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77580 78252 . + . ID=id-GGE_0707-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77580 78192 . + . ID=id-GGE_0707-6;Note=specific~superfamily%3B label: ABC_Carb_Solutes_like;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77697 77916 . + . ID=id-GGE_0707-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78450 78459 . + . ID=id-GGE_0707-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=fbpC;locus_tag=GGE_0707 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77604 77970 . - . ID=id-AFQR01000012.1:77604..77970;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77694 78387 . - . ID=id-AFQR01000012.1:77694..78387;Dbxref=InterPro:IPR013611,PFAM:PF08402;Note=superfamily~tobe_2~transport-associated ob%2C type 2%3B label: TOBE_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 77889 78276 . - . ID=id-AFQR01000012.1:77889..78276;Dbxref=InterPro:IPR008995;Note=superfamily:SSF50331~mop-like~molybdate/tungstate binding;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78015 78147 . - . ID=id-AFQR01000012.1:78015..78147;Dbxref=InterPro:IPR015853;Note=ProfileScan:PS51242~fbpc~abc transporter%2C ferric cation import%2C fbpc;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78639 78648 . - . ID=id-AFQR01000012.1:78639..78648;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 78698 80014 . - . ID=gene-GGE_0708;Name=GGE_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0708 GCA_000222085.2|AFQR01000012.1 Genbank CDS 78698 80014 . - 0 ID=cds-EGT82610.1;Parent=gene-GGE_0708;Dbxref=GeneID:1176347,InterPro:IPR006043,PFAM:PF00860,NCBI_GP:EGT82610.1;Name=EGT82610.1;Note=HI_0125;Ontology_term=GO:0055085,GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0708;product=Putative permease;protein_id=EGT82610.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78698 80006 . - . ID=id-GGE_0708;Note=superfamily%3B label: Xan_ur_permease superfamily;gbkey=misc_feature;locus_tag=GGE_0708 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78710 79943 . - . ID=id-GGE_0708-2;Dbxref=InterPro:IPR006043;Note=HMMPanther:PTHR11119:SF9~xanthine-uracil / vitamin c permease family member~HMMPanther:PTHR11119~family not named~xanthine/uracil/vitamin c permease;gbkey=misc_feature;locus_tag=GGE_0708 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78752 79841 . - . ID=id-GGE_0708-3;Dbxref=InterPro:IPR006043,PFAM:PF00860;Note=xan_ur_permease~xanthine/uracil/vitamin c permease;gbkey=misc_feature;locus_tag=GGE_0708 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78761 78767 . - . ID=id-GGE_0708-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0708 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78734 79682 . + . ID=id-AFQR01000012.1:78734..79682;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78746 79634 . + . ID=id-AFQR01000012.1:78746..79634;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78752 79664 . + . ID=id-AFQR01000012.1:78752..79664;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78752 79283 . + . ID=id-AFQR01000012.1:78752..79283;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78752 79097 . + . ID=id-AFQR01000012.1:78752..79097;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78752 78857 . + . ID=id-AFQR01000012.1:78752..78857;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78755 79208 . + . ID=id-AFQR01000012.1:78755..79208;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78758 79949 . + . ID=id-AFQR01000012.1:78758..79949;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79847 . + . ID=id-AFQR01000012.1:78767..79847;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79721 . + . ID=id-AFQR01000012.1:78767..79721;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79586 . + . ID=id-AFQR01000012.1:78767..79586;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79394 . + . ID=id-AFQR01000012.1:78767..79394;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79097 . + . ID=id-AFQR01000012.1:78767..79097;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 79010 . + . ID=id-AFQR01000012.1:78767..79010;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 78767 78929 . + . ID=id-AFQR01000012.1:78767..78929;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80114 80123 . + . ID=id-AFQR01000012.1:80114..80123;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 80248 80781 . + . ID=gene-GGE_0709;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank CDS 80248 80781 . + 0 ID=cds-EGT82611.1;Parent=gene-GGE_0709;Dbxref=GeneID:1170585,InterPro:IPR008162,PFAM:PF00719,NCBI_GP:EGT82611.1;Name=EGT82611.1;Ontology_term=GO:0006796,GO:0005737,GO:0004427,GO:0000287;gbkey=CDS;gene=ppa;go_component=cytoplasm|0005737||;go_function=inorganic diphosphatase activity|0004427||,magnesium ion binding|0000287||;go_process=phosphate metabolic process|0006796||;locus_tag=GGE_0709;product=Inorganic pyrophosphatase;protein_id=EGT82611.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80257 80767 . + . ID=id-GGE_0709;Dbxref=InterPro:IPR008162;Note=Gene3D:3.90.80.10~inorganic pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80260 80764 . + . ID=id-GGE_0709-2;Dbxref=InterPro:IPR008162;Note=superfamily:SSF50324~inorganic pyrophosphatase~inorganic pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80296 80725 . + . ID=id-GGE_0709-3;Dbxref=InterPro:IPR008162;Note=HAMAP:MF_00209~inorganic_ppase~inorganic pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80296 80716 . + . ID=id-GGE_0709-4;Note=specific~superfamily%3B label: pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80305 80719 . + . ID=id-GGE_0709-5;Dbxref=InterPro:IPR008162,PFAM:PF00719;Note=pyrophosphatase~inorganic pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80410 80614 . + . ID=id-GGE_0709-6;Dbxref=InterPro:IPR008162;Note=HMMPanther:PTHR10286~inorganic pyrophosphatase~inorganic pyrophosphatase;gbkey=misc_feature;gene=ppa;locus_tag=GGE_0709 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80269 80449 . - . ID=id-AFQR01000012.1:80269..80449;Dbxref=InterPro:IPR008162;Note=PatternScan:PS00387~ppase~inorganic pyrophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 80284 80440 . - . ID=id-AFQR01000012.1:80284..80440;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81324 81333 . - . ID=id-AFQR01000012.1:81324..81333;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 81343 81900 . - . ID=gene-GGE_0710;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank CDS 81343 81900 . - 0 ID=cds-EGT82612.1;Parent=gene-GGE_0710;Dbxref=GeneID:1172466,InterPro:IPR000462,InterPro:IPR004570,PFAM:PF01066,PIR:PIRSF000847,TIGRFAM:TIGR00560,NCBI_GP:EGT82612.1;Name=EGT82612.1;Ontology_term=GO:0008654,GO:0016021,GO:0016020,GO:0008444,GO:0016780;gbkey=CDS;gene=pgsA;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||,phosphotransferase activity for other substituted phosphate groups|0016780||;go_process=phospholipid biosynthetic process|0008654||;locus_tag=GGE_0710;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=EGT82612.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81343 81895 . - . ID=id-GGE_0710;Dbxref=InterPro:IPR004570,PIR:PIRSF000847;Note=cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81343 81886 . - . ID=id-GGE_0710-2;Note=superfamily%3B label: CDP-OH_P_transf superfamily;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81352 81883 . - . ID=id-GGE_0710-3;Dbxref=InterPro:IPR004570,TIGRFAM:TIGR00560;Note=pgsa: cdp-diacylglycerol--glycerol-3-phospha~cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81352 81856 . - . ID=id-GGE_0710-4;Note=HMMPanther:PTHR14269~family not named;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81355 81637 . - . ID=id-GGE_0710-5;Dbxref=InterPro:IPR000462,PFAM:PF01066;Note=cdp-oh_p_transf~cdp-alcohol phosphatidyltransferase;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81358 81412 . - . ID=id-GGE_0710-6;Note=transmembrane_regions;gbkey=misc_feature;gene=pgsA;locus_tag=GGE_0710 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81370 81442 . + . ID=id-AFQR01000012.1:81370..81442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81382 81796 . + . ID=id-AFQR01000012.1:81382..81796;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81382 81622 . + . ID=id-AFQR01000012.1:81382..81622;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81412 81796 . + . ID=id-AFQR01000012.1:81412..81796;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81412 81490 . + . ID=id-AFQR01000012.1:81412..81490;Dbxref=InterPro:IPR000462;Note=PatternScan:PS00379~cdp_alcohol_p_transf~cdp-alcohol phosphatidyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 81412 81436 . + . ID=id-AFQR01000012.1:81412..81436;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 82001 82603 . - . ID=gene-GGE_0711;Name=GGE_0711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank CDS 82001 82603 . - 0 ID=cds-EGT82613.1;Parent=gene-GGE_0711;Dbxref=GeneID:145636415,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,InterPro:IPR019479,PFAM:PF00578,PFAM:PF10417,NCBI_GP:EGT82613.1;Name=EGT82613.1;Note=ZP_01792083;Ontology_term=GO:0045454,GO:0016209,GO:0016491,GO:0051920;gbkey=CDS;go_function=antioxidant activity|0016209||,oxidoreductase activity|0016491||,peroxiredoxin activity|0051920||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_0711;product=Putative peroxiredoxin;protein_id=EGT82613.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82001 82601 . - . ID=id-GGE_0711;Dbxref=InterPro:IPR012336;Note=multi-dom~superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold%3B label: PRK15000;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82001 82580 . - . ID=id-GGE_0711-2;Note=HMMPanther:PTHR10681~thioredoxin peroxidase;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82007 82487 . - . ID=id-GGE_0711-3;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82013 82526 . - . ID=id-GGE_0711-4;Note=specific~superfamily%3B label: PRX_Typ2cys;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82013 82475 . - . ID=id-GGE_0711-5;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82016 82406 . - . ID=id-GGE_0711-6;Dbxref=InterPro:IPR000866,PFAM:PF00578;Note=ahpc-tsa~alkyl hydroperoxide reductase subunit c/ thiol specific antioxidant;gbkey=misc_feature;locus_tag=GGE_0711 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82106 82487 . + . ID=id-AFQR01000012.1:82106..82487;Note=Gene3D:3.30.1020.10;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82106 82481 . + . ID=id-AFQR01000012.1:82106..82481;Dbxref=InterPro:IPR019479,PFAM:PF10417;Note=1-cysprx_c~peroxiredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank gene 82741 83928 . + . ID=gene-GGE_0712;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank CDS 82741 83928 . + 0 ID=cds-EGT82614.1;Parent=gene-GGE_0712;Dbxref=GeneID:1170930,InterPro:IPR000277,InterPro:IPR006233,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF01053,PIR:PIRSF001434,TIGRFAM:TIGR01324,NCBI_GP:EGT82614.1;Name=EGT82614.1;Ontology_term=GO:0006520,GO:0005737,GO:0003824,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,cystathionine beta-lyase activity|0004121||,pyridoxal phosphate binding|0030170||;go_process=cellular amino acid metabolic process|0006520||;locus_tag=GGE_0712;product=Cystathionine beta-lyase;protein_id=EGT82614.1;transl_table=11 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82741 83926 . + . ID=id-GGE_0712;Dbxref=InterPro:IPR000277,InterPro:IPR006233;Note=multi-dom~HMMPanther:PTHR11808:SF8~cystathionine beta-lyase~cystathionine beta-lyase%2C bacterial~HMMPanther:PTHR11808~family not named~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme%3B label: PRK08114;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82759 83500 . + . ID=id-GGE_0712-2;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82762 83908 . + . ID=id-GGE_0712-3;Dbxref=InterPro:IPR000277,PIR:PIRSF001434;Note=cystathionine gamma-synthase~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82765 83902 . + . ID=id-GGE_0712-4;Dbxref=InterPro:IPR006233,TIGRFAM:TIGR01324;Note=cysta_beta_ly_b: cystathionine beta-l~cystathionine beta-lyase%2C bacterial;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82765 83896 . + . ID=id-GGE_0712-5;Dbxref=InterPro:IPR000277,PFAM:PF01053;Note=cys_met_meta_pp~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82807 83854 . + . ID=id-GGE_0712-6;Note=superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82810 83857 . + . ID=id-GGE_0712-7;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=metC;locus_tag=GGE_0712 GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82786 83638 . - . ID=id-AFQR01000012.1:82786..83638;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 82786 83347 . - . ID=id-AFQR01000012.1:82786..83347;Dbxref=InterPro:IPR000277;Note=PatternScan:PS00868~cys_met_metab_pp~cys/met metabolism%2C pyridoxal phosphate-dependent enzyme;gbkey=misc_feature GCA_000222085.2|AFQR01000012.1 Genbank sequence_feature 83149 83518 . - . ID=id-AFQR01000012.1:83149..83518;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature ##sequence-region AFQR01000011.1 1 4335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000011.1 Genbank region 1 4335 . + . ID=AFQR01000011.1:1..4335;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 977 1523 . + . ID=id-AFQR01000011.1:977..1523;Dbxref=InterPro:IPR021234,PFAM:PF10933;Note=duf2827~protein of unknown function duf2827;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 977 1505 . + . ID=id-AFQR01000011.1:977..1505;Note=superfamily%3B label: DUF2827 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 998 1181 . - . ID=id-AFQR01000011.1:998..1181;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 1666 2077 . + . ID=id-AFQR01000011.1:1666..2077;Dbxref=InterPro:IPR021234,PFAM:PF10933;Note=duf2827~protein of unknown function duf2827;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 1666 2065 . + . ID=id-AFQR01000011.1:1666..2065;Note=superfamily%3B label: DUF2827 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank gene 2107 3234 . + . ID=gene-GGE_0620;Name=GGE_0620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0620 GCA_000222085.2|AFQR01000011.1 Genbank CDS 2107 3234 . + 0 ID=cds-EGT82624.1;Parent=gene-GGE_0620;Dbxref=GeneID:167859084,InterPro:IPR021234,PFAM:PF10933,NCBI_GP:EGT82624.1;Name=EGT82624.1;Note=ACA04479;gbkey=CDS;locus_tag=GGE_0620;product=Hypothetical protein;protein_id=EGT82624.1;transl_table=11 GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 2122 3205 . + . ID=id-GGE_0620;Dbxref=InterPro:IPR021234,PFAM:PF10933;Note=superfamily~duf2827~protein of unknown function duf2827%3B label: DUF2827 superfamily;gbkey=misc_feature;locus_tag=GGE_0620 GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 3256 3340 . + . ID=id-AFQR01000011.1:3256..3340;Note=superfamily%3B label: DUF2827 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 3298 3310 . + . ID=id-AFQR01000011.1:3298..3310;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 3568 4030 . + . ID=id-AFQR01000011.1:3568..4030;Dbxref=InterPro:IPR021234,PFAM:PF10933;Note=duf2827~protein of unknown function duf2827;gbkey=misc_feature GCA_000222085.2|AFQR01000011.1 Genbank sequence_feature 3574 4027 . + . ID=id-AFQR01000011.1:3574..4027;Note=superfamily%3B label: DUF2827 superfamily;gbkey=misc_feature ##sequence-region AFQR01000010.1 1 472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000010.1 Genbank region 1 472 . + . ID=AFQR01000010.1:1..472;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 ##sequence-region AFQR01000009.1 1 152435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000009.1 Genbank region 1 152435 . + . ID=AFQR01000009.1:1..152435;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000009.1 Genbank gene 326 811 . + . ID=gene-GGE_0490;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank CDS 326 811 . + 0 ID=cds-EGT82659.1;Parent=gene-GGE_0490;Dbxref=GeneID:14286132,InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,PFAM:PF00210,NCBI_GP:EGT82659.1;Name=EGT82659.1;Ontology_term=GO:0006879,GO:0006826,GO:0055114,GO:0005488,GO:0008199,GO:0016491,GO:0046914;gbkey=CDS;gene=ftnA;go_function=binding|0005488||,ferric iron binding|0008199||,oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=cellular iron ion homeostasis|0006879||,iron ion transport|0006826||,oxidation-reduction process|0055114||;locus_tag=GGE_0490;product=Putative ferritin-1;protein_id=EGT82659.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 326 806 . + . ID=id-GGE_0490;Dbxref=InterPro:IPR012347;Note=Gene3D:1.20.1260.10~ferritin-related;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 326 803 . + . ID=id-GGE_0490-2;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 326 761 . + . ID=id-GGE_0490-3;Dbxref=InterPro:IPR009040;Note=ProfileScan:PS50905~ferritin_like~ferritin-like;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 335 794 . + . ID=id-GGE_0490-4;Note=specific~superfamily%3B label: Ferritin_like superfamily;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 344 785 . + . ID=id-GGE_0490-5;Dbxref=InterPro:IPR001519;Note=HMMPanther:PTHR11431:SF4~ferritin~HMMPanther:PTHR11431~family not named~ferritin;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 350 737 . + . ID=id-GGE_0490-6;Note=multi-dom%3B label: Ferritin;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 350 731 . + . ID=id-GGE_0490-7;Dbxref=InterPro:IPR008331,PFAM:PF00210;Note=ferritin~ferritin/dps protein domain;gbkey=misc_feature;gene=ftnA;locus_tag=GGE_0490 GCA_000222085.2|AFQR01000009.1 Genbank gene 829 1326 . + . ID=gene-GGE_0491;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank CDS 829 1326 . + 0 ID=cds-EGT82660.1;Parent=gene-GGE_0491;Dbxref=InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,PFAM:PF00210,NCBI_GP:EGT82660.1;Name=EGT82660.1;Ontology_term=GO:0006879,GO:0006826,GO:0055114,GO:0005488,GO:0008199,GO:0016491,GO:0046914;gbkey=CDS;gene=ftnB;go_function=binding|0005488||,ferric iron binding|0008199||,oxidoreductase activity|0016491||,transition metal ion binding|0046914||;go_process=cellular iron ion homeostasis|0006879||,iron ion transport|0006826||,oxidation-reduction process|0055114||;locus_tag=GGE_0491;product=Putative ferritin-2;protein_id=EGT82660.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 829 1315 . + . ID=id-GGE_0491;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 829 1312 . + . ID=id-GGE_0491-2;Dbxref=InterPro:IPR012347;Note=Gene3D:1.20.1260.10~ferritin-related;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 829 1303 . + . ID=id-GGE_0491-3;Dbxref=InterPro:IPR001519;Note=HMMPanther:PTHR11431:SF4~ferritin~HMMPanther:PTHR11431~family not named~ferritin;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 829 1264 . + . ID=id-GGE_0491-4;Dbxref=InterPro:IPR009040;Note=ProfileScan:PS50905~ferritin_like~ferritin-like;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 838 1297 . + . ID=id-GGE_0491-5;Note=specific~superfamily%3B label: Ferritin_like superfamily;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 850 1243 . + . ID=id-GGE_0491-6;Note=multi-dom%3B label: Ferritin;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 853 1234 . + . ID=id-GGE_0491-7;Dbxref=InterPro:IPR008331,PFAM:PF00210;Note=ferritin~ferritin/dps protein domain;gbkey=misc_feature;gene=ftnB;locus_tag=GGE_0491 GCA_000222085.2|AFQR01000009.1 Genbank gene 2286 2579 . - . ID=gene-GGE_0492;Name=GGE_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0492 GCA_000222085.2|AFQR01000009.1 Genbank CDS 2286 2579 . - 0 ID=cds-EGT82661.1;Parent=gene-GGE_0492;Dbxref=GeneID:251792292,NCBI_GP:EGT82661.1;Name=EGT82661.1;Note=YP_003007014~NT05HA_0514;gbkey=CDS;locus_tag=GGE_0492;product=Hypothetical protein;protein_id=EGT82661.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 3404 3446 . - . ID=id-AFQR01000009.1:3404..3446;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 3879 4733 . - . ID=gene-GGE_0493;Name=GGE_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0493 GCA_000222085.2|AFQR01000009.1 Genbank CDS 3879 4733 . - 0 ID=cds-EGT82662.1;Parent=gene-GGE_0493;Dbxref=GeneID:145629863,PFAM:PF09718,NCBI_GP:EGT82662.1;Name=EGT82662.1;Note=ZP_01785656;gbkey=CDS;locus_tag=GGE_0493;product=Hypothetical protein;protein_id=EGT82662.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 3906 3987 . - . ID=id-GGE_0493;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0493 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 3939 4536 . - . ID=id-GGE_0493-2;Note=multi-dom%3B label: tape_meas_lam_C;gbkey=misc_feature;locus_tag=GGE_0493 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4023 4113 . - . ID=id-GGE_0493-3;Note=superfamily%3B label: Tape_meas_lam_C superfamily;gbkey=misc_feature;locus_tag=GGE_0493 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4026 4107 . - . ID=id-GGE_0493-4;Dbxref=PFAM:PF09718;Note=tape_meas_lam_c;gbkey=misc_feature;locus_tag=GGE_0493 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 3915 4344 . + . ID=id-AFQR01000009.1:3915..4344;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 3927 4260 . + . ID=id-AFQR01000009.1:3927..4260;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 4740 7250 . - . ID=gene-GGE_0494;Name=GGE_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0494 GCA_000222085.2|AFQR01000009.1 Genbank CDS 4740 7250 . - 0 ID=cds-EGT82663.1;Parent=gene-GGE_0494;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675,NCBI_GP:EGT82663.1;Name=EGT82663.1;Note=Hypothetical tape measure domain;gbkey=CDS;locus_tag=GGE_0494;product=putative tape measure domain-containing protein;protein_id=EGT82663.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4746 4782 . - . ID=id-GGE_0494;Note=seg;gbkey=misc_feature;locus_tag=GGE_0494 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4770 6213 . + . ID=id-AFQR01000009.1:4770..6213;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4773 5970 . + . ID=id-AFQR01000009.1:4773..5970;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4782 6738 . + . ID=id-AFQR01000009.1:4782..6738;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4785 4977 . + . ID=id-AFQR01000009.1:4785..4977;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4794 5244 . + . ID=id-AFQR01000009.1:4794..5244;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4806 6936 . + . ID=id-AFQR01000009.1:4806..6936;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4806 6192 . + . ID=id-AFQR01000009.1:4806..6192;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4815 5751 . + . ID=id-AFQR01000009.1:4815..5751;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4827 6303 . + . ID=id-AFQR01000009.1:4827..6303;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4896 5298 . + . ID=id-AFQR01000009.1:4896..5298;Note=superfamily%3B label: COG3941 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 4965 5244 . + . ID=id-AFQR01000009.1:4965..5244;Dbxref=InterPro:IPR013491,TIGRFAM:TIGR02675;Note=tape_meas_nterm: tape measure domain~tape measure domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 7303 7539 . - . ID=gene-GGE_0495;Name=GGE_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0495 GCA_000222085.2|AFQR01000009.1 Genbank CDS 7303 7539 . - 0 ID=cds-EGT82664.1;Parent=gene-GGE_0495;Dbxref=GeneID:301168937,NCBI_GP:EGT82664.1;Name=EGT82664.1;Note=CBW28532;gbkey=CDS;locus_tag=GGE_0495;product=Conserved putative Hypothetical protein;protein_id=EGT82664.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7324 7363 . - . ID=id-GGE_0495;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0495 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7339 7351 . - . ID=id-GGE_0495-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0495 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7372 7396 . + . ID=id-AFQR01000009.1:7372..7396;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 7555 7857 . - . ID=gene-GGE_0496;Name=GGE_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0496 GCA_000222085.2|AFQR01000009.1 Genbank CDS 7555 7857 . - 0 ID=cds-EGT82665.1;Parent=gene-GGE_0496;Dbxref=GeneID:145629859,InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT82665.1;Name=EGT82665.1;Note=ZP_01785652;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_0496;product=Putative transcription regulator;protein_id=EGT82665.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7615 7741 . - . ID=id-GGE_0496;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0496 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7624 7756 . - . ID=id-GGE_0496-2;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_0496 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7654 7717 . - . ID=id-GGE_0496-3;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_0496 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7654 7702 . - . ID=id-GGE_0496-4;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=superfamily~hth_3~helix-turn-helix type 3%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_0496 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 7847 7907 . - . ID=id-AFQR01000009.1:7847..7907;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 8054 8210 . - . ID=id-AFQR01000009.1:8054..8210;Note=superfamily%3B label: Gp49 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 8084 8180 . - . ID=id-AFQR01000009.1:8084..8180;Dbxref=InterPro:IPR009241,PFAM:PF05973;Note=gp49~protein of unknown function duf891;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 8293 8517 . - . ID=gene-GGE_0497;Name=GGE_0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0497 GCA_000222085.2|AFQR01000009.1 Genbank CDS 8293 8517 . - 0 ID=cds-EGT82666.1;Parent=gene-GGE_0497;Dbxref=GeneID:145629857,NCBI_GP:EGT82666.1;Name=EGT82666.1;Note=ZP_01785650~CGSHi22121_00202;gbkey=CDS;locus_tag=GGE_0497;product=Hypothetical protein;protein_id=EGT82666.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank gene 8562 8969 . - . ID=gene-GGE_0498;Name=GGE_0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0498 GCA_000222085.2|AFQR01000009.1 Genbank CDS 8562 8969 . - 0 ID=cds-EGT82667.1;Parent=gene-GGE_0498;Dbxref=GeneID:145629856,NCBI_GP:EGT82667.1;Name=EGT82667.1;Note=ZP_01785649~CGSHi22121_00197;gbkey=CDS;locus_tag=GGE_0498;product=Hypothetical protein;protein_id=EGT82667.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 8592 8862 . + . ID=id-AFQR01000009.1:8592..8862;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9001 9025 . - . ID=id-AFQR01000009.1:9001..9025;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9046 9055 . - . ID=id-AFQR01000009.1:9046..9055;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9219 9228 . + . ID=id-AFQR01000009.1:9219..9228;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9237 9246 . - . ID=id-AFQR01000009.1:9237..9246;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 9252 9902 . - . ID=gene-GGE_0499;Name=GGE_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0499 GCA_000222085.2|AFQR01000009.1 Genbank CDS 9252 9902 . - 0 ID=cds-EGT82668.1;Parent=gene-GGE_0499;Dbxref=GeneID:145635844,NCBI_GP:EGT82668.1;Name=EGT82668.1;Note=ZP_01791535~CGSHiAA_00080;gbkey=CDS;locus_tag=GGE_0499;product=Hypothetical protein;protein_id=EGT82668.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9288 9519 . + . ID=id-AFQR01000009.1:9288..9519;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 9905 10315 . - . ID=gene-GGE_0500;Name=GGE_0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0500 GCA_000222085.2|AFQR01000009.1 Genbank CDS 9905 10315 . - 0 ID=cds-EGT82669.1;Parent=gene-GGE_0500;Dbxref=GeneID:145629853,InterPro:IPR009312,PFAM:PF06141,NCBI_GP:EGT82669.1;Name=EGT82669.1;Note=ZP_01785646;gbkey=CDS;locus_tag=GGE_0500;product=putative phage minor tail U;protein_id=EGT82669.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9905 10310 . - . ID=id-GGE_0500;Dbxref=InterPro:IPR009312,PFAM:PF06141;Note=phage_tail_u~phage minor tail u;gbkey=misc_feature;locus_tag=GGE_0500 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9914 10304 . - . ID=id-GGE_0500-2;Note=superfamily~superfamily:SSF143749~phage tail like protein%3B label: Phage_tail_U superfamily;gbkey=misc_feature;locus_tag=GGE_0500 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 9947 10130 . + . ID=id-AFQR01000009.1:9947..10130;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 10302 10853 . - . ID=gene-GGE_0501;Name=GGE_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0501 GCA_000222085.2|AFQR01000009.1 Genbank CDS 10302 10853 . - 0 ID=cds-EGT82670.1;Parent=gene-GGE_0501;Dbxref=GeneID:301168945,InterPro:IPR010633,PFAM:PF06763,PIR:PIRSF004395,NCBI_GP:EGT82670.1;Name=EGT82670.1;Note=CBW28540;gbkey=CDS;locus_tag=GGE_0501;product=putative phage minor tail protein;protein_id=EGT82670.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 10302 10806 . - . ID=id-GGE_0501;Dbxref=InterPro:IPR010633,PIR:PIRSF004395;Note=tail component protein z%2C bacteriophage lambda type~prophage minor tail z;gbkey=misc_feature;locus_tag=GGE_0501 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 10323 10794 . - . ID=id-GGE_0501-2;Dbxref=InterPro:IPR010633,PFAM:PF06763;Note=minor_tail_z~prophage minor tail z;gbkey=misc_feature;locus_tag=GGE_0501 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 10353 10368 . - . ID=id-GGE_0501-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0501 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 10431 10686 . - . ID=id-GGE_0501-4;Note=superfamily%3B label: Minor_tail_Z superfamily;gbkey=misc_feature;locus_tag=GGE_0501 GCA_000222085.2|AFQR01000009.1 Genbank gene 10856 11167 . - . ID=gene-GGE_0502;Name=GGE_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0502 GCA_000222085.2|AFQR01000009.1 Genbank CDS 10856 11167 . - 0 ID=cds-EGT82671.1;Parent=gene-GGE_0502;Dbxref=GeneID:145635841,NCBI_GP:EGT82671.1;Name=EGT82671.1;Note=ZP_01791532~CGSHiAA_00065;gbkey=CDS;locus_tag=GGE_0502;product=Hypothetical protein;protein_id=EGT82671.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 10940 11084 . - . ID=id-GGE_0502;Note=Gene3D:2.40.10.210;gbkey=misc_feature;locus_tag=GGE_0502 GCA_000222085.2|AFQR01000009.1 Genbank gene 11737 13764 . - . ID=gene-GGE_0503;Name=GGE_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank CDS 11737 13764 . - 0 ID=cds-EGT82672.1;Parent=gene-GGE_0503;Dbxref=GeneID:145640030,InterPro:IPR001907,InterPro:IPR018774,InterPro:IPR023562,PFAM:PF00574,PFAM:PF10124,NCBI_GP:EGT82672.1;Name=EGT82672.1;Note=ZP_01795627;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0503;product=putative Clp-like protease;protein_id=EGT82672.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11791 12298 . - . ID=id-GGE_0503;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11797 12259 . - . ID=id-GGE_0503-2;Note=Gene3D:3.90.226.10;gbkey=misc_feature;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11839 12217 . - . ID=id-GGE_0503-3;Note=specific~superfamily%3B label: crotonase-like superfamily;gbkey=misc_feature;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11911 12151 . - . ID=id-GGE_0503-4;Dbxref=InterPro:IPR001907,PFAM:PF00574;Note=clp_protease~peptidase s14%2C clpp;gbkey=misc_feature;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11920 12307 . - . ID=id-GGE_0503-5;Dbxref=InterPro:IPR023562;Note=HMMPanther:PTHR10381:SF3~atp-dependent clp protease proteolytic subunit~HMMPanther:PTHR10381~atp-dependent clp protease proteolytic subunit~peptidase s14/s49;gbkey=misc_feature;locus_tag=GGE_0503 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11770 12235 . + . ID=id-AFQR01000009.1:11770..12235;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11782 13078 . + . ID=id-AFQR01000009.1:11782..13078;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11791 12025 . + . ID=id-AFQR01000009.1:11791..12025;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11797 12253 . + . ID=id-AFQR01000009.1:11797..12253;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11800 11932 . + . ID=id-AFQR01000009.1:11800..11932;Dbxref=InterPro:IPR001907;Note=FPrintScan:PR00127~clpproteasep~peptidase s14%2C clpp;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 11914 13339 . + . ID=id-AFQR01000009.1:11914..13339;Dbxref=InterPro:IPR018774,PFAM:PF10124;Note=superfamily~mu-like_gpt~mu-like major head subunit gpt%2C prophage%3B label: Mu-like_gpT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 13700 15223 . - . ID=gene-GGE_0504;Name=GGE_0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0504 GCA_000222085.2|AFQR01000009.1 Genbank CDS 13700 15223 . - 0 ID=cds-EGT82673.1;Parent=gene-GGE_0504;Dbxref=GeneID:145640029,InterPro:IPR006429,PFAM:PF05136,TIGRFAM:TIGR01539,NCBI_GP:EGT82673.1;Name=EGT82673.1;Note=ZP_01795626;Ontology_term=GO:0019028,GO:0003677;gbkey=CDS;go_component=viral capsid|0019028||;go_function=DNA binding|0003677||;locus_tag=GGE_0504;product=bacteriophage capsid protein;protein_id=EGT82673.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 13715 15176 . - . ID=id-GGE_0504;Note=multi-dom%3B label: COG5511;gbkey=misc_feature;locus_tag=GGE_0504 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 13790 15050 . - . ID=id-GGE_0504-2;Dbxref=InterPro:IPR006429,TIGRFAM:TIGR01539;Note=portal_lambda: phage portal protein%2C la~phage portal protein%2C lambda;gbkey=misc_feature;locus_tag=GGE_0504 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 13796 14735 . - . ID=id-GGE_0504-3;Dbxref=InterPro:IPR006429,PFAM:PF05136;Note=phage_portal_2~phage portal protein%2C lambda;gbkey=misc_feature;locus_tag=GGE_0504 GCA_000222085.2|AFQR01000009.1 Genbank gene 15227 15472 . - . ID=gene-GGE_0505;Name=GGE_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0505 GCA_000222085.2|AFQR01000009.1 Genbank CDS 15227 15472 . - 0 ID=cds-EGT82674.1;Parent=gene-GGE_0505;Dbxref=GeneID:301168950,NCBI_GP:EGT82674.1;Name=EGT82674.1;Note=CBW28545;gbkey=CDS;locus_tag=GGE_0505;product=Conserved putative Hypothetical protein;protein_id=EGT82674.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15248 15314 . - . ID=id-GGE_0505;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0505 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15293 15365 . + . ID=id-AFQR01000009.1:15293..15365;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 15574 16038 . - . ID=gene-GGE_0506;Name=GGE_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0506 GCA_000222085.2|AFQR01000009.1 Genbank CDS 15574 16038 . - 0 ID=cds-EGT82675.1;Parent=gene-GGE_0506;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT82675.1;Name=EGT82675.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_0506;product=transposase like protein;protein_id=EGT82675.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15589 15967 . - . ID=id-GGE_0506;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0506 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15592 15967 . - . ID=id-GGE_0506-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0506 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15619 15931 . - . ID=id-GGE_0506-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_0506 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 15622 15928 . - . ID=id-GGE_0506-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0506 GCA_000222085.2|AFQR01000009.1 Genbank gene 16211 18250 . - . ID=gene-GGE_0507;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank CDS 16211 18250 . - 0 ID=cds-EGT82676.1;Parent=gene-GGE_0507;Dbxref=GeneID:81335357,InterPro:IPR001650,InterPro:IPR001943,InterPro:IPR004807,InterPro:IPR006935,InterPro:IPR009055,InterPro:IPR014001,PFAM:PF00271,PFAM:PF02151,PFAM:PF04851,PFAM:PF12344,TIGRFAM:TIGR00631,NCBI_GP:EGT82676.1;Name=EGT82676.1;Ontology_term=GO:0006281,GO:0009432,GO:0006289,GO:0005524,GO:0003677,GO:0009381,GO:0004386,GO:0016787,GO:0004518,GO:0003676;gbkey=CDS;gene=uvrB;go_function=ATP binding|0005524||,DNA binding|0003677||,excinuclease ABC activity|0009381||,helicase activity|0004386||,hydrolase activity|0016787||,nuclease activity|0004518||,nucleic acid binding|0003676||;go_process=DNA repair|0006281||,SOS response|0009432||,nucleotide-excision repair|0006289||;locus_tag=GGE_0507;product=UvrABC system protein B;protein_id=EGT82676.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16232 18218 . - . ID=id-GGE_0507;Note=multi-dom%3B label: PRK05298;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16232 17453 . - . ID=id-GGE_0507-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16235 18212 . - . ID=id-GGE_0507-3;Dbxref=InterPro:IPR004807;Note=HAMAP:MF_00204~uvrb~excinuclease abc%2C b subunit;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16235 18209 . - . ID=id-GGE_0507-4;Note=HMMPanther:PTHR24029:SF65~uvrabc system protein b~HMMPanther:PTHR24029~family not named;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16238 18203 . - . ID=id-GGE_0507-5;Dbxref=InterPro:IPR004807,TIGRFAM:TIGR00631;Note=uvrb: excinuclease abc subunit b~excinuclease abc%2C b subunit;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16247 16529 . - . ID=id-GGE_0507-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16274 16505 . - . ID=id-GGE_0507-7;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16304 16613 . - . ID=id-GGE_0507-8;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16328 16409 . - . ID=id-GGE_0507-9;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature;gene=uvrB;locus_tag=GGE_0507 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16298 18095 . + . ID=id-AFQR01000009.1:16298..18095;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16316 18131 . + . ID=id-AFQR01000009.1:16316..18131;Dbxref=InterPro:IPR001943,PFAM:PF02151;Note=uvr~uvrb/uvrc protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16319 18128 . + . ID=id-AFQR01000009.1:16319..18128;Dbxref=InterPro:IPR001943;Note=superfamily~ProfileScan:PS50151~uvr~uvrb/uvrc protein%3B label: UVR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16334 18119 . + . ID=id-AFQR01000009.1:16334..18119;Note=Gene3D:4.10.860.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16340 17882 . + . ID=id-AFQR01000009.1:16340..17882;Dbxref=PFAM:PF12344;Note=uvrb;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16343 18119 . + . ID=id-AFQR01000009.1:16343..18119;Dbxref=InterPro:IPR009055;Note=superfamily:SSF46600~c-terminal uvrc-binding domain of uvrb~uvrb uvrc-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16343 17882 . + . ID=id-AFQR01000009.1:16343..17882;Note=superfamily%3B label: UvrB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16365 16374 . + . ID=id-AFQR01000009.1:16365..16374;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16451 17621 . + . ID=id-AFQR01000009.1:16451..17621;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16586 17513 . + . ID=id-AFQR01000009.1:16586..17513;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16700 17519 . + . ID=id-AFQR01000009.1:16700..17519;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16706 17492 . + . ID=id-AFQR01000009.1:16706..17492;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16727 16793 . + . ID=id-AFQR01000009.1:16727..16793;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 16769 17468 . + . ID=id-AFQR01000009.1:16769..17468;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18250 18259 . + . ID=id-AFQR01000009.1:18250..18259;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 18869 19837 . - . ID=gene-GGE_0508;Name=GGE_0508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank CDS 18869 19837 . - 0 ID=cds-EGT82677.1;Parent=gene-GGE_0508;Dbxref=GeneID:1175587,InterPro:IPR011541,PFAM:PF03824,NCBI_GP:EGT82677.1;Name=EGT82677.1;Note=HI_1248;Ontology_term=GO:0030001,GO:0055085,GO:0016021,GO:0046872;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=metal ion binding|0046872||;go_process=metal ion transport|0030001||,transmembrane transport|0055085||;locus_tag=GGE_0508;product=Putative nickel/cobalt efflux system;protein_id=EGT82677.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18890 18938 . - . ID=id-GGE_0508;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18893 18902 . - . ID=id-GGE_0508-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19745 . - . ID=id-GGE_0508-3;Note=superfamily%3B label: NicO superfamily;gbkey=misc_feature;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19037 19637 . - . ID=id-GGE_0508-4;Dbxref=InterPro:IPR011541,PFAM:PF03824;Note=nico~nickel/cobalt transporter%2C high-affinity;gbkey=misc_feature;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19301 19310 . - . ID=id-GGE_0508-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0508 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18911 19190 . + . ID=id-AFQR01000009.1:18911..19190;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18920 19256 . + . ID=id-AFQR01000009.1:18920..19256;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19742 . + . ID=id-AFQR01000009.1:18938..19742;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19589 . + . ID=id-AFQR01000009.1:18938..19589;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19508 . + . ID=id-AFQR01000009.1:18938..19508;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19256 . + . ID=id-AFQR01000009.1:18938..19256;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19160 . + . ID=id-AFQR01000009.1:18938..19160;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 18938 19031 . + . ID=id-AFQR01000009.1:18938..19031;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19283 19292 . + . ID=id-AFQR01000009.1:19283..19292;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 19840 20460 . - . ID=gene-GGE_0509;Name=GGE_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0509 GCA_000222085.2|AFQR01000009.1 Genbank CDS 19840 20460 . - 0 ID=cds-EGT82678.1;Parent=gene-GGE_0509;Dbxref=InterPro:IPR010412,InterPro:IPR016537,PFAM:PF06226,PIR:PIRSF008159,NCBI_GP:EGT82678.1;Name=EGT82678.1;Note=HI_1249;gbkey=CDS;locus_tag=GGE_0509;product=putative uncharacterized;protein_id=EGT82678.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19840 20458 . - . ID=id-GGE_0509;Dbxref=InterPro:IPR016537,PIR:PIRSF008159;Note=uncharacterised conserved protein ucp008159~uncharacterised conserved protein ucp008159;gbkey=misc_feature;locus_tag=GGE_0509 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19846 20452 . - . ID=id-GGE_0509-2;Note=superfamily%3B label: DUF1007 superfamily;gbkey=misc_feature;locus_tag=GGE_0509 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 19861 20437 . - . ID=id-GGE_0509-3;Dbxref=InterPro:IPR010412,PFAM:PF06226;Note=duf1007~protein of unknown function duf1007;gbkey=misc_feature;locus_tag=GGE_0509 GCA_000222085.2|AFQR01000009.1 Genbank gene 20786 22456 . + . ID=gene-GGE_0510;Name=GGE_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank CDS 20786 22456 . + 0 ID=cds-EGT82679.1;Parent=gene-GGE_0510;Dbxref=InterPro:IPR003439,InterPro:IPR017871,InterPro:IPR022374,PFAM:PF00005,TIGRFAM:TIGR03719,NCBI_GP:EGT82679.1;Name=EGT82679.1;Note=HI_1252;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0510;product=putative aBC transporter-like protein;protein_id=EGT82679.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20786 22454 . + . ID=id-GGE_0510;Note=multi-dom~HMMPanther:PTHR19211:SF37~subfamily not named~HMMPanther:PTHR19211~family not named%3B label: PRK11819;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20795 22442 . + . ID=id-GGE_0510-2;Dbxref=InterPro:IPR022374,TIGRFAM:TIGR03719;Note=abc_abc_chvd: atp-binding cassette prote~abc transporter%2C atp-binding protein%2C chvd;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20807 21551 . + . ID=id-GGE_0510-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20807 21509 . + . ID=id-GGE_0510-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20843 20963 . + . ID=id-GGE_0510-5;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20927 21224 . + . ID=id-GGE_0510-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20927 21176 . + . ID=id-GGE_0510-7;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21164 21254 . + . ID=id-GGE_0510-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0510 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20822 21047 . - . ID=id-AFQR01000009.1:20822..21047;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20825 21836 . - . ID=id-AFQR01000009.1:20825..21836;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20828 21317 . - . ID=id-AFQR01000009.1:20828..21317;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20831 21533 . - . ID=id-AFQR01000009.1:20831..21533;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 20831 21278 . - . ID=id-AFQR01000009.1:20831..21278;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21017 21269 . - . ID=id-AFQR01000009.1:21017..21269;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21119 21878 . - . ID=id-AFQR01000009.1:21119..21878;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21371 21761 . - . ID=id-AFQR01000009.1:21371..21761;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21404 21761 . - . ID=id-AFQR01000009.1:21404..21761;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21452 21752 . - . ID=id-AFQR01000009.1:21452..21752;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21467 21761 . - . ID=id-AFQR01000009.1:21467..21761;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 21791 21800 . - . ID=id-AFQR01000009.1:21791..21800;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22467 22476 . + . ID=id-AFQR01000009.1:22467..22476;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 22512 22859 . + . ID=gene-GGE_0511;Name=GGE_0511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0511 GCA_000222085.2|AFQR01000009.1 Genbank CDS 22512 22859 . + 0 ID=cds-EGT82680.1;Parent=gene-GGE_0511;Dbxref=GeneID:1175590,InterPro:IPR007360,PFAM:PF04247,NCBI_GP:EGT82680.1;Name=EGT82680.1;Note=HI_1253;gbkey=CDS;locus_tag=GGE_0511;product=Hypothetical protein;protein_id=EGT82680.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22512 22857 . + . ID=id-GGE_0511;Note=superfamily%3B label: SirB superfamily;gbkey=misc_feature;locus_tag=GGE_0511 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22518 22854 . + . ID=id-GGE_0511-2;Dbxref=InterPro:IPR007360,PFAM:PF04247;Note=sirb~protein;gbkey=misc_feature;locus_tag=GGE_0511 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22524 22566 . + . ID=id-GGE_0511-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0511 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22566 22710 . - . ID=id-AFQR01000009.1:22566..22710;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22572 22797 . - . ID=id-AFQR01000009.1:22572..22797;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22581 22632 . - . ID=id-AFQR01000009.1:22581..22632;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 22863 24707 . + . ID=gene-GGE_0512;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank CDS 22863 24707 . + 0 ID=cds-EGT82681.1;Parent=gene-GGE_0512;Dbxref=InterPro:IPR000182,InterPro:IPR007807,InterPro:IPR013562,InterPro:IPR016181,PFAM:PF00583,PFAM:PF05127,PFAM:PF08351,NCBI_GP:EGT82681.1;Name=EGT82681.1;Ontology_term=GO:0008152,GO:0008080;gbkey=CDS;gene=tmcA;go_function=N-acetyltransferase activity|0008080||;go_process=metabolic process|0008152||;locus_tag=GGE_0512;product=tRNAMet cytidine acetyltransferase TmcA;protein_id=EGT82681.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22872 24699 . + . ID=id-GGE_0512;Note=multi-dom%3B label: COG1444;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22959 23112 . + . ID=id-GGE_0512-2;Dbxref=InterPro:IPR013562,PFAM:PF08351;Note=duf1726~domain of unknown function duf1726;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 22974 24252 . + . ID=id-GGE_0512-3;Note=HMMPanther:PTHR10925:SF1~gb def: hypothetical protein ypfi~HMMPanther:PTHR10925~n-acetyltransferase 10;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23436 23445 . + . ID=id-GGE_0512-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23550 23637 . + . ID=id-GGE_0512-5;Dbxref=InterPro:IPR016181;Note=superfamily:SSF55729~acyl-coa n-acyltransferases (nat)~acyl-coa n-acyltransferase;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 24283 24292 . + . ID=id-GGE_0512-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tmcA;locus_tag=GGE_0512 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23025 24138 . - . ID=id-AFQR01000009.1:23025..24138;Dbxref=InterPro:IPR000182,PFAM:PF00583;Note=acetyltransf_1~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23217 23277 . - . ID=id-AFQR01000009.1:23217..23277;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23268 23385 . - . ID=id-AFQR01000009.1:23268..23385;Note=superfamily%3B label: DUF699 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23307 23349 . - . ID=id-AFQR01000009.1:23307..23349;Dbxref=InterPro:IPR007807,PFAM:PF05127;Note=duf699~domain of unknown function duf699%2C exodeoxyribonuclease v alpha chain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23328 23868 . - . ID=id-AFQR01000009.1:23328..23868;Dbxref=InterPro:IPR016181;Note=Gene3D:3.40.630.30~acyl-coa n-acyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23391 23838 . - . ID=id-AFQR01000009.1:23391..23838;Dbxref=InterPro:IPR000182;Note=ProfileScan:PS51186~gnat~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 23694 23703 . - . ID=id-AFQR01000009.1:23694..23703;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 24704 24877 . + . ID=gene-GGE_0513;Name=GGE_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0513 GCA_000222085.2|AFQR01000009.1 Genbank CDS 24704 24877 . + 0 ID=cds-EGT82682.1;Parent=gene-GGE_0513;Dbxref=GeneID:1175594,NCBI_GP:EGT82682.1;Name=EGT82682.1;Note=HI_1257;gbkey=CDS;locus_tag=GGE_0513;product=Hypothetical protein;protein_id=EGT82682.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 24704 24875 . + . ID=id-GGE_0513;Note=BlastProDom:PD052088~q4qjy2_haei8_q4qjy2;gbkey=misc_feature;locus_tag=GGE_0513 GCA_000222085.2|AFQR01000009.1 Genbank gene 24938 28420 . + . ID=gene-GGE_0514;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank CDS 24938 28420 . + 0 ID=cds-EGT82683.1;Parent=gene-GGE_0514;Dbxref=GeneID:1170943,InterPro:IPR001650,InterPro:IPR003711,InterPro:IPR004576,InterPro:IPR005118,InterPro:IPR011545,InterPro:IPR014001,PFAM:PF00270,PFAM:PF00271,PFAM:PF02559,PFAM:PF03461,TIGRFAM:TIGR00580,NCBI_GP:EGT82683.1;Name=EGT82683.1;Ontology_term=GO:0006281,GO:0006355,GO:0005524,GO:0008026,GO:0003684,GO:0004386,GO:0003676,GO:0003700;gbkey=CDS;gene=mfd;go_function=ATP binding|0005524||,ATP-dependent helicase activity|0008026||,damaged DNA binding|0003684||,helicase activity|0004386||,nucleic acid binding|0003676||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=DNA repair|0006281||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0514;product=Transcription-repair-coupling factor;protein_id=EGT82683.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 24989 25979 . + . ID=id-GGE_0514;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25007 28349 . + . ID=id-GGE_0514-2;Note=multi-dom%3B label: PRK10689;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25418 27746 . + . ID=id-GGE_0514-3;Dbxref=InterPro:IPR004576,TIGRFAM:TIGR00580;Note=mfd: transcription-repair coupling factor~transcription-repair coupling factor;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 26008 26017 . + . ID=id-GGE_0514-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 26273 26894 . + . ID=id-GGE_0514-5;Note=HMMPanther:PTHR14025:SF19~transcription-repair coupling factor~HMMPanther:PTHR14025~family not named;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28369 28378 . + . ID=id-GGE_0514-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mfd;locus_tag=GGE_0514 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 24977 26177 . - . ID=id-AFQR01000009.1:24977..26177;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 24983 25133 . - . ID=id-AFQR01000009.1:24983..25133;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25151 27494 . - . ID=id-AFQR01000009.1:25151..27494;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25178 26384 . - . ID=id-AFQR01000009.1:25178..26384;Note=superfamily:SSF141259~card-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25232 26414 . - . ID=id-AFQR01000009.1:25232..26414;Dbxref=InterPro:IPR003711,PFAM:PF02559;Note=superfamily~card_trcf~transcription factor card%3B label: CarD_TRCF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25238 28001 . - . ID=id-AFQR01000009.1:25238..28001;Dbxref=InterPro:IPR005118,PFAM:PF03461;Note=trcf~transcription-repair-coupling factor domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25241 28001 . - . ID=id-AFQR01000009.1:25241..28001;Note=superfamily%3B label: TRCF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25292 26030 . - . ID=id-AFQR01000009.1:25292..26030;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25328 27344 . - . ID=id-AFQR01000009.1:25328..27344;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25349 26852 . - . ID=id-AFQR01000009.1:25349..26852;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25397 26774 . - . ID=id-AFQR01000009.1:25397..26774;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25400 27380 . - . ID=id-AFQR01000009.1:25400..27380;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25403 27956 . - . ID=id-AFQR01000009.1:25403..27956;Note=superfamily:SSF143517~trcf domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25415 26798 . - . ID=id-AFQR01000009.1:25415..26798;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25424 26831 . - . ID=id-AFQR01000009.1:25424..26831;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25496 27332 . - . ID=id-AFQR01000009.1:25496..27332;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25571 27323 . - . ID=id-AFQR01000009.1:25571..27323;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 25811 26621 . - . ID=id-AFQR01000009.1:25811..26621;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 28476 29867 . - . ID=gene-GGE_0515;Name=GGE_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank CDS 28476 29867 . - 0 ID=cds-EGT82684.1;Parent=gene-GGE_0515;Dbxref=GeneID:1170411,InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011782,PFAM:PF00089,PFAM:PF00595,TIGRFAM:TIGR02037,NCBI_GP:EGT82684.1;Name=EGT82684.1;Note=HI_1259;Ontology_term=GO:0006508,GO:0003824,GO:0005515,GO:0004252;gbkey=CDS;go_function=catalytic activity|0003824||,protein binding|0005515||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0515;product=Putative periplasmic serine protease do/hhoA-like protein;protein_id=EGT82684.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28476 29334 . - . ID=id-GGE_0515;Dbxref=InterPro:IPR009003;Note=superfamily:SSF50494~trypsin-like serine proteases~peptidase cysteine/serine%2C trypsin-like;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28551 29790 . - . ID=id-GGE_0515-2;Note=HMMPanther:PTHR22939:SF10~serine protease do/htra-related~HMMPanther:PTHR22939~family not named;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28581 28890 . - . ID=id-GGE_0515-3;Note=Gene3D:2.40.10.10;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28584 29757 . - . ID=id-GGE_0515-4;Dbxref=InterPro:IPR011782,TIGRFAM:TIGR02037;Note=multi-dom~degp_htra_do: protease do~peptidase s1c%2C do%3B label: degP_htrA_DO;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28755 28992 . - . ID=id-GGE_0515-5;Note=superfamily%3B label: Tryp_SPc superfamily;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28773 28968 . - . ID=id-GGE_0515-6;Dbxref=InterPro:IPR001254,PFAM:PF00089;Note=trypsin~peptidase s1/s6%2C chymotrypsin/hap;gbkey=misc_feature;locus_tag=GGE_0515 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28515 29424 . + . ID=id-AFQR01000009.1:28515..29424;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28515 28806 . + . ID=id-AFQR01000009.1:28515..28806;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28530 29166 . + . ID=id-AFQR01000009.1:28530..29166;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28530 29100 . + . ID=id-AFQR01000009.1:28530..29100;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28539 28869 . + . ID=id-AFQR01000009.1:28539..28869;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28551 28992 . + . ID=id-AFQR01000009.1:28551..28992;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28680 29661 . + . ID=id-AFQR01000009.1:28680..29661;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28686 29622 . + . ID=id-AFQR01000009.1:28686..29622;Dbxref=InterPro:IPR001478,PFAM:PF00595;Note=pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28713 29628 . + . ID=id-AFQR01000009.1:28713..29628;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28722 29622 . + . ID=id-AFQR01000009.1:28722..29622;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28725 29292 . + . ID=id-AFQR01000009.1:28725..29292;Dbxref=InterPro:IPR001478,PFAM:PF00595;Note=pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28746 29304 . + . ID=id-AFQR01000009.1:28746..29304;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28752 29568 . + . ID=id-AFQR01000009.1:28752..29568;Dbxref=InterPro:IPR001478;Note=ProfileScan:PS50106~pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28752 29277 . + . ID=id-AFQR01000009.1:28752..29277;Dbxref=InterPro:IPR001478;Note=ProfileScan:PS50106~pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28767 29301 . + . ID=id-AFQR01000009.1:28767..29301;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28776 29301 . + . ID=id-AFQR01000009.1:28776..29301;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 28782 28995 . + . ID=id-AFQR01000009.1:28782..28995;Note=Gene3D:2.40.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 30069 30959 . + . ID=gene-GGE_0516;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank CDS 30069 30959 . + 0 ID=cds-EGT82685.1;Parent=gene-GGE_0516;Dbxref=GeneID:221271833,InterPro:IPR000022,InterPro:IPR000438,InterPro:IPR011762,PFAM:PF01039,TIGRFAM:TIGR00515,NCBI_GP:EGT82685.1;Name=EGT82685.1;Ontology_term=GO:0006633,GO:0009317,GO:0003989,GO:0016874;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||;go_function=acetyl-CoA carboxylase activity|0003989||,ligase activity|0016874||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_0516;product=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;protein_id=EGT82685.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30069 30957 . + . ID=id-GGE_0516;Note=HMMPanther:PTHR22855:SF4~acetyl-coa carboxylase carboxyltransferase-related~HMMPanther:PTHR22855~family not named;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30069 30924 . + . ID=id-GGE_0516-2;Dbxref=InterPro:IPR000438,TIGRFAM:TIGR00515;Note=superfamily~multi-dom~accd: acetyl-coa carboxylase%2C carboxyl trans~acetyl-coa carboxylase carboxyl transferase%2C beta subunit%3B label: ACCA superfamily;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30069 30912 . + . ID=id-GGE_0516-3;Dbxref=InterPro:IPR000438;Note=HAMAP:MF_01395~acetylcoa_ct_beta~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30123 30867 . + . ID=id-GGE_0516-4;Note=Gene3D:3.90.226.10;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30144 30846 . + . ID=id-GGE_0516-5;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30162 30753 . + . ID=id-GGE_0516-6;Dbxref=InterPro:IPR011762;Note=ProfileScan:PS50980~coa_ct_nter~acetyl-coenzyme a carboxyltransferase;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30348 30516 . + . ID=id-GGE_0516-7;Dbxref=InterPro:IPR000022,PFAM:PF01039;Note=carboxyl_trans~carboxyl transferase;gbkey=misc_feature;gene=accD;locus_tag=GGE_0516 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30099 30822 . - . ID=id-AFQR01000009.1:30099..30822;Dbxref=InterPro:IPR000438;Note=FPrintScan:PR01070~accctrfraseb~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30105 30756 . - . ID=id-AFQR01000009.1:30105..30756;Dbxref=InterPro:IPR000438;Note=FPrintScan:PR01070~accctrfraseb~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30114 30456 . - . ID=id-AFQR01000009.1:30114..30456;Dbxref=InterPro:IPR000438;Note=FPrintScan:PR01070~accctrfraseb~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30123 30669 . - . ID=id-AFQR01000009.1:30123..30669;Dbxref=InterPro:IPR000438;Note=FPrintScan:PR01070~accctrfraseb~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30126 30558 . - . ID=id-AFQR01000009.1:30126..30558;Dbxref=InterPro:IPR000438;Note=FPrintScan:PR01070~accctrfraseb~acetyl-coa carboxylase carboxyl transferase%2C beta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 30961 32265 . + . ID=gene-GGE_0517;Name=GGE_0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank CDS 30961 32265 . + 0 ID=cds-EGT82686.1;Parent=gene-GGE_0517;Dbxref=GeneID:16273179,InterPro:IPR001645,InterPro:IPR004101,InterPro:IPR013221,InterPro:IPR018109,PFAM:PF08245,TIGRFAM:TIGR01499,NCBI_GP:EGT82686.1;Name=EGT82686.1;Note=NP_439416;Ontology_term=GO:0009058,GO:0009396,GO:0005524,GO:0016874,GO:0004326;gbkey=CDS;go_function=ATP binding|0005524||,ligase activity|0016874||,tetrahydrofolylpolyglutamate synthase activity|0004326||;go_process=biosynthetic process|0009058||,folic acid-containing compound biosynthetic process|0009396||;locus_tag=GGE_0517;product=folylpolyglutamate synthase/dihydrofolate synthase;protein_id=EGT82686.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30973 32254 . + . ID=id-GGE_0517;Note=multi-dom%3B label: PRK10846;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30973 31798 . + . ID=id-GGE_0517-2;Dbxref=InterPro:IPR013221;Note=superfamily:SSF53623~murd-like peptide ligases%2C catalytic domain~mur ligase%2C central;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30982 31783 . + . ID=id-GGE_0517-3;Dbxref=InterPro:IPR013221;Note=Gene3D:3.40.1190.10~mur ligase%2C central;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31027 32182 . + . ID=id-GGE_0517-4;Dbxref=InterPro:IPR001645;Note=HMMPanther:PTHR11136~family not named~folylpolyglutamate synthetase;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31045 32179 . + . ID=id-GGE_0517-5;Dbxref=InterPro:IPR001645,TIGRFAM:TIGR01499;Note=folc: bifunctional protein folc~folylpolyglutamate synthetase;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31111 31513 . + . ID=id-GGE_0517-6;Dbxref=InterPro:IPR013221,PFAM:PF08245;Note=mur_ligase_m~mur ligase%2C central;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31111 31399 . + . ID=id-GGE_0517-7;Note=superfamily%3B label: Mur_ligase_M superfamily;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31668 31677 . + . ID=id-GGE_0517-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 32185 32194 . + . ID=id-GGE_0517-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0517 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 30991 31711 . - . ID=id-AFQR01000009.1:30991..31711;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31009 31378 . - . ID=id-AFQR01000009.1:31009..31378;Dbxref=InterPro:IPR018109;Note=PatternScan:PS01012~folylpolyglu_synt_2~folylpolyglutamate synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31033 31105 . - . ID=id-AFQR01000009.1:31033..31105;Dbxref=InterPro:IPR018109;Note=PatternScan:PS01011~folylpolyglu_synt_1~folylpolyglutamate synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31093 31885 . - . ID=id-AFQR01000009.1:31093..31885;Note=superfamily%3B label: Mur_ligase_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31339 31885 . - . ID=id-AFQR01000009.1:31339..31885;Dbxref=InterPro:IPR004101;Note=Gene3D:3.90.190.20~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 31417 31810 . - . ID=id-AFQR01000009.1:31417..31810;Dbxref=InterPro:IPR004101;Note=superfamily:SSF53244~murd-like peptide ligases%2C peptide-binding domain~mur ligase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 32325 34835 . - . ID=gene-GGE_0518;Name=GGE_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0518 GCA_000222085.2|AFQR01000009.1 Genbank CDS 32325 34835 . - 0 ID=cds-EGT82687.1;Parent=gene-GGE_0518;Dbxref=InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF03797,TIGRFAM:TIGR01414,NCBI_GP:EGT82687.1;Name=EGT82687.1;Note=Hypothetical autotransporter beta-domain;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_0518;product=putative autotransporter betadomain-containing protein;protein_id=EGT82687.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 32325 33549 . - . ID=id-GGE_0518;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_0518 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 32388 33492 . - . ID=id-GGE_0518-2;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature;locus_tag=GGE_0518 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33360 33798 . - . ID=id-GGE_0518-3;Dbxref=InterPro:IPR006315,TIGRFAM:TIGR01414;Note=autotrans_barl: outer membrane autotra~outer membrane autotransporter barrel;gbkey=misc_feature;locus_tag=GGE_0518 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33381 33777 . - . ID=id-GGE_0518-4;Note=multi-dom%3B label: autotrans_barl;gbkey=misc_feature;locus_tag=GGE_0518 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 32370 33693 . + . ID=id-AFQR01000009.1:32370..33693;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 32601 33273 . + . ID=id-AFQR01000009.1:32601..33273;Note=specific~superfamily%3B label: PL2_Passenger_AT;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33081 34032 . + . ID=id-AFQR01000009.1:33081..34032;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33132 33972 . + . ID=id-AFQR01000009.1:33132..33972;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33225 33933 . + . ID=id-AFQR01000009.1:33225..33933;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 33324 33834 . + . ID=id-AFQR01000009.1:33324..33834;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 35721 36455 . - . ID=gene-GGE_0519;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=GGE_0519 GCA_000222085.2|AFQR01000009.1 Genbank CDS 35721 36455 . - 0 ID=cds-EGT82688.1;Parent=gene-GGE_0519;Dbxref=InterPro:IPR003848,PFAM:PF02698,NCBI_GP:EGT82688.1;Name=EGT82688.1;gbkey=CDS;gene=sanA;locus_tag=GGE_0519;product=Protein sanA;protein_id=EGT82688.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 35949 36099 . - . ID=id-GGE_0519;Dbxref=InterPro:IPR003848,PFAM:PF02698;Note=duf218~domain of unknown function duf218;gbkey=misc_feature;gene=sanA;locus_tag=GGE_0519 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 35952 36141 . - . ID=id-GGE_0519-2;Note=specific~superfamily%3B label: YdcF-like;gbkey=misc_feature;gene=sanA;locus_tag=GGE_0519 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 35781 35823 . + . ID=id-AFQR01000009.1:35781..35823;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36349 36358 . + . ID=id-AFQR01000009.1:36349..36358;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 36559 37635 . + . ID=gene-GGE_0520;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank CDS 36559 37635 . + 0 ID=cds-EGT82689.1;Parent=gene-GGE_0520;Dbxref=GeneID:81335371,InterPro:IPR000073,InterPro:IPR008220,PFAM:PF00561,PIR:PIRSF000443,TIGRFAM:TIGR01392,NCBI_GP:EGT82689.1;Name=EGT82689.1;Ontology_term=GO:0005737,GO:0016413;gbkey=CDS;gene=metX;go_component=cytoplasm|0005737||;go_function=O-acetyltransferase activity|0016413||;locus_tag=GGE_0520;product=Homoserine O-acetyltransferase;protein_id=EGT82689.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36559 37633 . + . ID=id-GGE_0520;Dbxref=InterPro:IPR008220,PIR:PIRSF000443;Note=multi-dom~homoserine acetyltransferase~homoserine acetyltransferase%3B label: MET2;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36559 37630 . + . ID=id-GGE_0520-2;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36568 37624 . + . ID=id-GGE_0520-3;Dbxref=InterPro:IPR008220;Note=HAMAP:MF_00296~homoser_o_acetyltr~homoserine acetyltransferase;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36589 37600 . + . ID=id-GGE_0520-4;Dbxref=InterPro:IPR008220,TIGRFAM:TIGR01392;Note=homosero_ac_trn: homoserine o-acetylt~homoserine acetyltransferase;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36625 37555 . + . ID=id-GGE_0520-5;Note=HMMPanther:PTHR10992:SF262~homoserine o-acetyltransferase~HMMPanther:PTHR10992~alpha/beta hydrolase fold-containing protein;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36628 37561 . + . ID=id-GGE_0520-6;Note=superfamily:SSF53474~alpha/beta-hydrolases;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36844 37333 . + . ID=id-GGE_0520-7;Dbxref=InterPro:IPR000073,PFAM:PF00561;Note=abhydrolase_1~alpha/beta hydrolase fold-1;gbkey=misc_feature;gene=metX;locus_tag=GGE_0520 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 36961 37219 . - . ID=id-AFQR01000009.1:36961..37219;Note=Gene3D:3.40.50.1820;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37642 37651 . + . ID=id-AFQR01000009.1:37642..37651;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37759 37768 . - . ID=id-AFQR01000009.1:37759..37768;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 37957 38943 . + . ID=gene-GGE_0521;Name=GGE_0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank CDS 37957 38943 . + 0 ID=cds-EGT82690.1;Parent=gene-GGE_0521;Dbxref=GeneID:307250957,InterPro:IPR004701,InterPro:IPR004720,InterPro:IPR013789,PFAM:PF03610,PFAM:PF03830,TIGRFAM:TIGR00824,NCBI_GP:EGT82690.1;Name=EGT82690.1;Note=ZP_07532883;Ontology_term=GO:0008643,GO:0009401,GO:0005737,GO:0016021,GO:0016773,GO:0008982;gbkey=CDS;go_component=cytoplasm|0005737||,integral to membrane|0016021||;go_function=phosphotransferase activity alcohol group as acceptor|0016773||,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||;go_process=carbohydrate transport|0008643||,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||;locus_tag=GGE_0521;product=PTS system%2C mannose/fructose/sorbose family%2C IIA subunit;protein_id=EGT82690.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37957 38344 . + . ID=id-GGE_0521;Dbxref=InterPro:IPR004701;Note=superfamily:SSF53062~iia domain of mannose transporter%2C iia-man~phosphotransferase system%2C fructose subfamily iia component~Gene3D:3.40.50.510~phosphotransferase system%2C fructose subfamily iia component;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37957 38332 . + . ID=id-GGE_0521-2;Dbxref=InterPro:IPR004701;Note=ProfileScan:PS51096~pts_eiia_type_4~phosphotransferase system%2C fructose subfamily iia component;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37957 38308 . + . ID=id-GGE_0521-3;Dbxref=InterPro:IPR013789,TIGRFAM:TIGR00824;Note=eiia-man: pts system%2C mannose/fructose/sorbo~phosphotransferase system%2C fructose subfamily iia component%2C subgroup;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37963 38899 . + . ID=id-GGE_0521-4;Note=multi-dom%3B label: PRK15088;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37963 38320 . + . ID=id-GGE_0521-5;Note=specific~superfamily%3B label: PTS_IIA_man;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 37963 38299 . + . ID=id-GGE_0521-6;Dbxref=InterPro:IPR004701,PFAM:PF03610;Note=eiia-man~phosphotransferase system%2C fructose subfamily iia component;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38449 38452 . + . ID=id-GGE_0521-7;Dbxref=InterPro:IPR004720;Note=ProfileScan:PS51101~pts_eiib_type_4~phosphotransferase system%2C sorbose subfamily iib component;gbkey=misc_feature;locus_tag=GGE_0521 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38011 38371 . - . ID=id-AFQR01000009.1:38011..38371;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38401 38461 . - . ID=id-AFQR01000009.1:38401..38461;Dbxref=InterPro:IPR004720,PFAM:PF03830;Note=ptsiib_sorb~phosphotransferase system%2C sorbose subfamily iib component;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38410 38461 . - . ID=id-AFQR01000009.1:38410..38461;Note=specific~superfamily%3B label: PTS_IIB_man;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38419 38455 . - . ID=id-AFQR01000009.1:38419..38455;Dbxref=InterPro:IPR004720;Note=Gene3D:3.40.35.10~phosphotransferase system%2C sorbose subfamily iib component;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38428 38455 . - . ID=id-AFQR01000009.1:38428..38455;Dbxref=InterPro:IPR004720;Note=superfamily:SSF52728~pts iib component~phosphotransferase system%2C sorbose subfamily iib component;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 38955 39749 . + . ID=gene-GGE_0522;Name=GGE_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank CDS 38955 39749 . + 0 ID=cds-EGT82691.1;Parent=gene-GGE_0522;Dbxref=GeneID:293391635,InterPro:IPR004700,InterPro:IPR018404,PFAM:PF03609,TIGRFAM:TIGR00822,NCBI_GP:EGT82691.1;Name=EGT82691.1;Note=ZP_06635969;Ontology_term=GO:0009401,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||;locus_tag=GGE_0522;product=fructose permease iic component;protein_id=EGT82691.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38955 39747 . + . ID=id-GGE_0522;Dbxref=InterPro:IPR018404,TIGRFAM:TIGR00822;Note=eii-sor: pts system%2C mannose/fructose/sorbos~phosphotransferase system%2C sorbose-specific iic subunit%2C subgroup;gbkey=misc_feature;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38955 39711 . + . ID=id-GGE_0522-2;Note=superfamily%3B label: EII-Sor superfamily;gbkey=misc_feature;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38955 39660 . + . ID=id-GGE_0522-3;Dbxref=InterPro:IPR004700;Note=ProfileScan:PS51106~pts_eiic_type_4~phosphotransferase system%2C sorbose-specific iic subunit;gbkey=misc_feature;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38961 39660 . + . ID=id-GGE_0522-4;Dbxref=InterPro:IPR004700,PFAM:PF03609;Note=eii-sor~phosphotransferase system%2C sorbose-specific iic subunit;gbkey=misc_feature;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38970 39009 . + . ID=id-GGE_0522-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0522 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 38988 39234 . - . ID=id-AFQR01000009.1:38988..39234;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39015 39483 . - . ID=id-AFQR01000009.1:39015..39483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39024 39576 . - . ID=id-AFQR01000009.1:39024..39576;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39024 39372 . - . ID=id-AFQR01000009.1:39024..39372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39024 39243 . - . ID=id-AFQR01000009.1:39024..39243;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39024 39132 . - . ID=id-AFQR01000009.1:39024..39132;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39024 39051 . - . ID=id-AFQR01000009.1:39024..39051;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 39760 40593 . + . ID=gene-GGE_0523;Name=GGE_0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0523 GCA_000222085.2|AFQR01000009.1 Genbank CDS 39760 40593 . + 0 ID=cds-EGT82692.1;Parent=gene-GGE_0523;Dbxref=GeneID:52426432,InterPro:IPR004704,InterPro:IPR018405,PFAM:PF03613,TIGRFAM:TIGR00828,NCBI_GP:EGT82692.1;Name=EGT82692.1;Note=YP_089569;Ontology_term=GO:0009401,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||;locus_tag=GGE_0523;product=putative phosphotransferase system%2C mannose/fructose/sorbose family IID component;protein_id=EGT82692.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39760 40591 . + . ID=id-GGE_0523;Note=superfamily%3B label: EIID-AGA superfamily;gbkey=misc_feature;locus_tag=GGE_0523 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39778 40573 . + . ID=id-GGE_0523-2;Dbxref=InterPro:IPR004704,InterPro:IPR018405,TIGRFAM:TIGR00828;Note=ProfileScan:PS51108~pts_eiid~phosphotransferase system%2C mannose/fructose/sorbose family iid component~eiid-aga: pts system%2C mannose/fructose/sorbo~phosphotransferase system%2C mannose/fructose/sorbose family iid component%2C subgroup;gbkey=misc_feature;locus_tag=GGE_0523 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39781 40570 . + . ID=id-GGE_0523-3;Dbxref=InterPro:IPR004704,PFAM:PF03613;Note=eiid-aga~phosphotransferase system%2C mannose/fructose/sorbose family iid component;gbkey=misc_feature;locus_tag=GGE_0523 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39799 40534 . - . ID=id-AFQR01000009.1:39799..40534;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39808 40138 . - . ID=id-AFQR01000009.1:39808..40138;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39820 40531 . - . ID=id-AFQR01000009.1:39820..40531;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39829 40444 . - . ID=id-AFQR01000009.1:39829..40444;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39829 40318 . - . ID=id-AFQR01000009.1:39829..40318;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39829 40141 . - . ID=id-AFQR01000009.1:39829..40141;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 39838 40438 . - . ID=id-AFQR01000009.1:39838..40438;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41072 41081 . + . ID=id-AFQR01000009.1:41072..41081;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41090 41099 . - . ID=id-AFQR01000009.1:41090..41099;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 41105 42439 . - . ID=gene-GGE_0524;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank CDS 41105 42439 . - 0 ID=cds-EGT82693.1;Parent=gene-GGE_0524;Dbxref=GeneID:1168540,InterPro:IPR001518,InterPro:IPR014729,InterPro:IPR018223,InterPro:IPR023437,PFAM:PF00764,TIGRFAM:TIGR00032,NCBI_GP:EGT82693.1;Name=EGT82693.1;Ontology_term=GO:0006526,GO:0005524,GO:0004055;gbkey=CDS;gene=argG;go_function=ATP binding|0005524||,argininosuccinate synthase activity|0004055||;go_process=arginine biosynthetic process|0006526||;locus_tag=GGE_0524;product=Argininosuccinate synthase;protein_id=EGT82693.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41111 42434 . - . ID=id-GGE_0524;Dbxref=InterPro:IPR023437;Note=HAMAP:MF_00581~arg_succ_synth_type2~argininosuccinate synthase%2C type 2 subfamily;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41114 41669 . - . ID=id-GGE_0524-2;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41120 42392 . - . ID=id-GGE_0524-3;Dbxref=InterPro:IPR001518;Note=HMMPanther:PTHR11587~family not named~argininosuccinate synthase;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41120 41621 . - . ID=id-GGE_0524-4;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41147 42332 . - . ID=id-GGE_0524-5;Dbxref=InterPro:IPR001518,TIGRFAM:TIGR00032;Note=multi-dom~argg: argininosuccinate synthase~argininosuccinate synthase%3B label: argG;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41150 42302 . - . ID=id-GGE_0524-6;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41156 42293 . - . ID=id-GGE_0524-7;Dbxref=InterPro:IPR001518,PFAM:PF00764;Note=arginosuc_synth~argininosuccinate synthase;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41636 41696 . - . ID=id-GGE_0524-8;Note=Gene3D:3.90.1260.10;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41678 41864 . - . ID=id-GGE_0524-9;Note=superfamily:SSF69864~argininosuccinate synthetase domain;gbkey=misc_feature;gene=argG;locus_tag=GGE_0524 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41132 41159 . + . ID=id-AFQR01000009.1:41132..41159;Dbxref=InterPro:IPR018223;Note=PatternScan:PS00564~argininosuccin_syn_1~argininosuccinate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41141 41495 . + . ID=id-AFQR01000009.1:41141..41495;Dbxref=InterPro:IPR018223;Note=PatternScan:PS00565~argininosuccin_syn_2~argininosuccinate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 41297 42239 . + . ID=id-AFQR01000009.1:41297..42239;Note=Gene3D:1.10.287.400;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 42615 43403 . - . ID=gene-GGE_0525;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank CDS 42615 43403 . - 0 ID=cds-EGT82694.1;Parent=gene-GGE_0525;Dbxref=GeneID:166229549,InterPro:IPR001636,InterPro:IPR013816,InterPro:IPR018236,PFAM:PF01259,TIGRFAM:TIGR00081,NCBI_GP:EGT82694.1;Name=EGT82694.1;Ontology_term=GO:0006164,GO:0005524,GO:0016874,GO:0004639;gbkey=CDS;gene=purC;go_function=ATP binding|0005524||,ligase activity|0016874||,phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||;go_process=purine nucleotide biosynthetic process|0006164||;locus_tag=GGE_0525;product=Phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=EGT82694.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42615 43401 . - . ID=id-GGE_0525;Dbxref=InterPro:IPR001636,TIGRFAM:TIGR00081;Note=purc: phosphoribosylaminoimidazolesuccinocar~saicar synthetase~superfamily:SSF56104~saicar synthase-like~HAMAP:MF_00137~saicar_synth~saicar synthetase;gbkey=misc_feature;gene=purC;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42615 43398 . - . ID=id-GGE_0525-2;Dbxref=InterPro:IPR001636;Note=specific~superfamily~HMMPanther:PTHR11609:SF1~purine biosynthesis protein 7%2C pur7~HMMPanther:PTHR11609~family not named~saicar synthetase%3B label: SAICAR_synt superfamily;gbkey=misc_feature;gene=purC;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42615 43350 . - . ID=id-GGE_0525-3;Dbxref=InterPro:IPR001636,PFAM:PF01259;Note=saicar_synt~saicar synthetase;gbkey=misc_feature;gene=purC;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42615 42873 . - . ID=id-GGE_0525-4;Note=Gene3D:3.30.200.20;gbkey=misc_feature;gene=purC;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42876 43011 . - . ID=id-GGE_0525-5;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature;gene=purC;locus_tag=GGE_0525 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42642 43137 . + . ID=id-AFQR01000009.1:42642..43137;Dbxref=InterPro:IPR018236;Note=PatternScan:PS01058~saicar_synthetase_2~saicar synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 42660 42840 . + . ID=id-AFQR01000009.1:42660..42840;Dbxref=InterPro:IPR018236;Note=PatternScan:PS01057~saicar_synthetase_1~saicar synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43529 43538 . - . ID=id-AFQR01000009.1:43529..43538;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 43656 46013 . - . ID=gene-GGE_0526;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank CDS 43656 46013 . - 0 ID=cds-EGT82695.1;Parent=gene-GGE_0526;Dbxref=InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011813,InterPro:IPR012338,PFAM:PF00905,PFAM:PF00912,PIR:PIRSF002799,TIGRFAM:TIGR02071,NCBI_GP:EGT82695.1;Name=EGT82695.1;Ontology_term=GO:0009252,GO:0009273,GO:0046677,GO:0009274,GO:0003824,GO:0008658,GO:0008233,GO:0008955;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||;go_function=catalytic activity|0003824||,penicillin binding|0008658||,peptidase activity|0008233||,peptidoglycan glycosyltransferase activity|0008955||;go_process=peptidoglycan biosynthetic process|0009252||,peptidoglycan-based cell wall biogenesis|0009273||,response to antibiotic|0046677||;locus_tag=GGE_0526;product=Penicillin-binding protein 1B;protein_id=EGT82695.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43656 46005 . - . ID=id-GGE_0526;Dbxref=InterPro:IPR011813,PIR:PIRSF002799;Note=penicillin-binding protein 1b~penicillin-binding protein 1b;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43719 43725 . - . ID=id-GGE_0526-2;Note=transmembrane_regions;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43725 45834 . - . ID=id-GGE_0526-3;Dbxref=InterPro:IPR011813,TIGRFAM:TIGR02071;Note=multi-dom~pbp_1b: penicillin-binding protein 1b~penicillin-binding protein 1b%3B label: PBP_1b;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44127 44193 . - . ID=id-GGE_0526-4;Dbxref=InterPro:IPR001264,PFAM:PF00912;Note=transgly~glycosyl transferase%2C family 51;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44148 44175 . - . ID=id-GGE_0526-5;Note=superfamily%3B label: Transgly superfamily;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44607 44937 . - . ID=id-GGE_0526-6;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=mrcB;locus_tag=GGE_0526 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43692 45906 . + . ID=id-AFQR01000009.1:43692..45906;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 43692 45114 . + . ID=id-AFQR01000009.1:43692..45114;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44418 44946 . + . ID=id-AFQR01000009.1:44418..44946;Dbxref=InterPro:IPR001460,PFAM:PF00905;Note=transpeptidase~penicillin-binding protein%2C transpeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44463 44949 . + . ID=id-AFQR01000009.1:44463..44949;Note=superfamily%3B label: Transpeptidase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44580 44847 . + . ID=id-AFQR01000009.1:44580..44847;Note=Gene3D:3.40.710.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 44581 44590 . + . ID=id-AFQR01000009.1:44581..44590;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 46020 46418 . - . ID=gene-GGE_0527;Name=GGE_0527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0527 GCA_000222085.2|AFQR01000009.1 Genbank CDS 46020 46418 . - 0 ID=cds-EGT82696.1;Parent=gene-GGE_0527;Dbxref=InterPro:IPR008249,PFAM:PF06062,PIR:PIRSF006287,NCBI_GP:EGT82696.1;Name=EGT82696.1;Note=HI_1724;gbkey=CDS;locus_tag=GGE_0527;product=UPF0231 protein;protein_id=EGT82696.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46026 46056 . - . ID=id-GGE_0527;Note=seg;gbkey=misc_feature;locus_tag=GGE_0527 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46068 46371 . - . ID=id-GGE_0527-2;Dbxref=InterPro:IPR008249,PIR:PIRSF006287;Note=uncharacterised conserved protein%2C ucp006287 type~uncharacterised protein family upf0231~BlastProDom:PD020773~q4qjm3_haei8_q4qjm3~uncharacterised protein family upf0231;gbkey=misc_feature;locus_tag=GGE_0527 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46068 46368 . - . ID=id-GGE_0527-3;Dbxref=InterPro:IPR008249,PFAM:PF06062;Note=superfamily~upf0231~uncharacterised protein family upf0231%3B label: UPF0231 superfamily;gbkey=misc_feature;locus_tag=GGE_0527 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46246 46255 . + . ID=id-AFQR01000009.1:46246..46255;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 46375 46719 . - . ID=gene-GGE_0528;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank CDS 46375 46719 . - 0 ID=cds-EGT82697.1;Parent=gene-GGE_0528;Dbxref=GeneID:160380676,InterPro:IPR000361,InterPro:IPR016092,InterPro:IPR017870,InterPro:IPR023063,PFAM:PF01521,TIGRFAM:TIGR00049,NCBI_GP:EGT82697.1;Name=EGT82697.1;Ontology_term=GO:0016226,GO:0051536,GO:0005198;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||,structural molecule activity|0005198||;go_process=iron-sulfur cluster assembly|0016226||;locus_tag=GGE_0528;product=Iron-sulfur cluster insertion protein erpA;protein_id=EGT82697.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46375 46717 . - . ID=id-GGE_0528;Dbxref=InterPro:IPR023063;Note=superfamily~HAMAP:MF_01380~fe_s_insert_erpa~fes cluster insertion erpa%3B label: Fe-S_biosyn superfamily;gbkey=misc_feature;gene=erpA;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46396 46669 . - . ID=id-GGE_0528-2;Dbxref=InterPro:IPR000361;Note=superfamily:SSF89360~hesb-like domain~fes cluster biogenesis;gbkey=misc_feature;gene=erpA;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46396 46657 . - . ID=id-GGE_0528-3;Dbxref=InterPro:IPR000361;Note=Gene3D:2.60.300.12~fes cluster biogenesis;gbkey=misc_feature;gene=erpA;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46402 46693 . - . ID=id-GGE_0528-4;Dbxref=InterPro:IPR016092,TIGRFAM:TIGR00049;Note=HMMPanther:PTHR10072~iron-sulfur cluster assembly protein~tigr00049: iron-sulfur cluster assembly acc~fes cluster insertion;gbkey=misc_feature;gene=erpA;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46402 46651 . - . ID=id-GGE_0528-5;Dbxref=InterPro:IPR000361,PFAM:PF01521;Note=fe-s_biosyn~fes cluster biogenesis;gbkey=misc_feature;gene=erpA;locus_tag=GGE_0528 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46429 46660 . + . ID=id-AFQR01000009.1:46429..46660;Dbxref=InterPro:IPR017870;Note=PatternScan:PS01152~hesb~fes cluster insertion%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 46857 47663 . + . ID=gene-GGE_0529;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank CDS 46857 47663 . + 0 ID=cds-EGT82698.1;Parent=gene-GGE_0529;Dbxref=GeneID:1168444,InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,PFAM:PF00557,TIGRFAM:TIGR00500,NCBI_GP:EGT82698.1;Name=EGT82698.1;Ontology_term=GO:0009987,GO:0006508,GO:0004177,GO:0008235;gbkey=CDS;gene=map;go_function=aminopeptidase activity|0004177||,metalloexopeptidase activity|0008235||;go_process=cellular process|0009987||,proteolysis|0006508||;locus_tag=GGE_0529;product=Methionine aminopeptidase;protein_id=EGT82698.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46857 47661 . + . ID=id-GGE_0529;Note=HMMPanther:PTHR10804:SF45~methionine aminopeptidase 2~HMMPanther:PTHR10804~protease family m24 (methionyl aminopeptidase%2C aminopeptidase p);gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46863 47622 . + . ID=id-GGE_0529-2;Dbxref=InterPro:IPR000994;Note=superfamily:SSF55920~creatinase/aminopeptidase~peptidase m24%2C structural domain;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46866 47616 . + . ID=id-GGE_0529-3;Note=multi-dom%3B label: PRK07281;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46866 47607 . + . ID=id-GGE_0529-4;Dbxref=InterPro:IPR002467,TIGRFAM:TIGR00500;Note=met_pdase_i: methionine aminopeptidase%2C t~peptidase m24a%2C methionine aminopeptidase%2C subfamily 1;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46872 47613 . + . ID=id-GGE_0529-5;Dbxref=InterPro:IPR000994;Note=Gene3D:3.90.230.10~peptidase m24%2C structural domain;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46890 47577 . + . ID=id-GGE_0529-6;Note=specific~superfamily%3B label: APP_MetAP superfamily;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46896 47550 . + . ID=id-GGE_0529-7;Dbxref=InterPro:IPR000994,PFAM:PF00557;Note=peptidase_m24~peptidase m24%2C structural domain;gbkey=misc_feature;gene=map;locus_tag=GGE_0529 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46896 47439 . - . ID=id-AFQR01000009.1:46896..47439;Dbxref=InterPro:IPR001714;Note=FPrintScan:PR00599~mapeptidase~peptidase m24%2C methionine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46896 47346 . - . ID=id-AFQR01000009.1:46896..47346;Dbxref=InterPro:IPR001714;Note=FPrintScan:PR00599~mapeptidase~peptidase m24%2C methionine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46899 47064 . - . ID=id-AFQR01000009.1:46899..47064;Dbxref=InterPro:IPR001714;Note=FPrintScan:PR00599~mapeptidase~peptidase m24%2C methionine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46908 47133 . - . ID=id-AFQR01000009.1:46908..47133;Dbxref=InterPro:IPR001714;Note=FPrintScan:PR00599~mapeptidase~peptidase m24%2C methionine aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 46914 47364 . - . ID=id-AFQR01000009.1:46914..47364;Dbxref=InterPro:IPR002467;Note=PatternScan:PS00680~map_1~peptidase m24a%2C methionine aminopeptidase%2C subfamily 1;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 47711 48286 . - . ID=gene-GGE_0530;Name=GGE_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0530 GCA_000222085.2|AFQR01000009.1 Genbank CDS 47711 48286 . - 0 ID=cds-EGT82699.1;Parent=gene-GGE_0530;Dbxref=GeneID:251792597,InterPro:IPR020945,PFAM:PF02613,NCBI_GP:EGT82699.1;Name=EGT82699.1;Note=YP_003007323;gbkey=CDS;locus_tag=GGE_0530;product=chaperone protein TorD;protein_id=EGT82699.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 47711 48269 . - . ID=id-GGE_0530;Note=superfamily%3B label: Nitrate_red_del superfamily;gbkey=misc_feature;locus_tag=GGE_0530 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 47720 48278 . - . ID=id-GGE_0530-2;Note=superfamily:SSF89155~tord-like;gbkey=misc_feature;locus_tag=GGE_0530 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 47879 48041 . - . ID=id-GGE_0530-3;Dbxref=InterPro:IPR020945,PFAM:PF02613;Note=nitrate_red_del~dmso/nitrate reductase chaperone;gbkey=misc_feature;locus_tag=GGE_0530 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 47897 48098 . - . ID=id-GGE_0530-4;Note=Gene3D:1.10.3480.10;gbkey=misc_feature;locus_tag=GGE_0530 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 47747 48095 . + . ID=id-AFQR01000009.1:47747..48095;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 48279 50738 . - . ID=gene-GGE_0531;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank CDS 48279 50738 . - 0 ID=cds-EGT82700.1;Parent=gene-GGE_0531;Dbxref=InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,InterPro:IPR011887,PFAM:PF00384,PFAM:PF01568,TIGRFAM:TIGR01409,TIGRFAM:TIGR02164,NCBI_GP:EGT82700.1;Name=EGT82700.1;Ontology_term=GO:0055114,GO:0042597,GO:0005488,GO:0009055,GO:0030151,GO:0016491,GO:0050626;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||;go_function=binding|0005488||,electron carrier activity|0009055||,molybdenum ion binding|0030151||,oxidoreductase activity|0016491||,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0531;product=Trimethylamine-N-oxide reductase;protein_id=EGT82700.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48279 50736 . - . ID=id-GGE_0531;Dbxref=InterPro:IPR011887,TIGRFAM:TIGR02164;Note=tora: trimethylamine-n-oxide reductase~trimethylamine-n-oxide reductase tora;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48288 50724 . - . ID=id-GGE_0531-2;Note=multi-dom%3B label: PRK15102;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48288 48354 . - . ID=id-GGE_0531-3;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48333 50577 . - . ID=id-GGE_0531-4;Note=HMMPanther:PTHR11615:SF19~trimethylamine n-oxide reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48399 50154 . - . ID=id-GGE_0531-5;Note=specific~superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48408 50136 . - . ID=id-GGE_0531-6;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48534 49704 . - . ID=id-GGE_0531-7;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48825 48981 . - . ID=id-GGE_0531-8;Note=Gene3D:3.40.228.10;gbkey=misc_feature;gene=torA;locus_tag=GGE_0531 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48333 49785 . + . ID=id-AFQR01000009.1:48333..49785;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00490~molybdopterin_prok_2~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48363 50424 . + . ID=id-AFQR01000009.1:48363..50424;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00932~molybdopterin_prok_3~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48642 50304 . + . ID=id-AFQR01000009.1:48642..50304;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48642 49620 . + . ID=id-AFQR01000009.1:48642..49620;Note=Gene3D:3.40.50.740;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48666 50298 . + . ID=id-AFQR01000009.1:48666..50298;Note=specific~superfamily%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48762 50223 . + . ID=id-AFQR01000009.1:48762..50223;Dbxref=InterPro:IPR009010;Note=Gene3D:2.40.40.20~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 48783 50181 . + . ID=id-AFQR01000009.1:48783..50181;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 50751 51926 . - . ID=gene-GGE_0532;Name=GGE_0532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank CDS 50751 51926 . - 0 ID=cds-EGT82701.1;Parent=gene-GGE_0532;Dbxref=GeneID:251792599,InterPro:IPR005126,InterPro:IPR009154,InterPro:IPR011031,PFAM:PF03264,PIR:PIRSF000014,TIGRFAM:TIGR02162,NCBI_GP:EGT82701.1;Name=EGT82701.1;Note=YP_003007325;Ontology_term=GO:0009276,GO:0016021,GO:0009055,GO:0020037,GO:0005506;gbkey=CDS;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||;locus_tag=GGE_0532;product=trimethylamine-N-oxide reductase c-type cytochrome TorC;protein_id=EGT82701.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50751 51915 . - . ID=id-GGE_0532;Dbxref=InterPro:IPR009154,PIR:PIRSF000014;Note=cytochrome c-type protein~membrane-bound tetrahaem cytochrome torc/yeck;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50760 51909 . - . ID=id-GGE_0532-2;Dbxref=InterPro:IPR009154,TIGRFAM:TIGR02162;Note=torc: trimethylamine-n-oxide reductase c-typ~membrane-bound tetrahaem cytochrome torc/yeck;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50763 51903 . - . ID=id-GGE_0532-3;Note=multi-dom%3B label: torC;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50766 51288 . - . ID=id-GGE_0532-4;Note=superfamily%3B label: PRK10617 superfamily;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50775 51276 . - . ID=id-GGE_0532-5;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50787 51267 . - . ID=id-GGE_0532-6;Dbxref=InterPro:IPR005126,PFAM:PF03264;Note=cytochrom_nnt~napc/nirt cytochrome c;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50790 50820 . - . ID=id-GGE_0532-7;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50883 51159 . - . ID=id-GGE_0532-8;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature;locus_tag=GGE_0532 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50796 51738 . + . ID=id-AFQR01000009.1:50796..51738;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 50811 51723 . + . ID=id-AFQR01000009.1:50811..51723;Note=Gene3D:1.10.780.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 51068 51077 . + . ID=id-AFQR01000009.1:51068..51077;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 51954 52115 . - . ID=gene-GGE_0533;Name=GGE_0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0533 GCA_000222085.2|AFQR01000009.1 Genbank CDS 51954 52115 . - 0 ID=cds-EGT82702.1;Parent=gene-GGE_0533;Dbxref=InterPro:IPR010649,PFAM:PF06796,NCBI_GP:EGT82702.1;Name=EGT82702.1;Note=Hypothetical nitrate/trimethylamine N-oxide reductase NapE/TorE;gbkey=CDS;locus_tag=GGE_0533;product=putative nitrate/trimethylamine N-oxide reductase NapE/TorE;protein_id=EGT82702.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 51975 52092 . - . ID=id-GGE_0533;Dbxref=InterPro:IPR010649,PFAM:PF06796;Note=nape~nitrate/trimethylamine n-oxide reductase nape/tore;gbkey=misc_feature;locus_tag=GGE_0533 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52014 52023 . - . ID=id-GGE_0533-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0533 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 51987 52005 . + . ID=id-AFQR01000009.1:51987..52005;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 52349 54940 . + . ID=gene-GGE_0534;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank CDS 52349 54940 . + 0 ID=cds-EGT82703.1;Parent=gene-GGE_0534;Dbxref=GeneID:166226151,InterPro:IPR002912,InterPro:IPR006674,InterPro:IPR010043,InterPro:IPR013546,InterPro:IPR023279,PFAM:PF01842,PFAM:PF01966,PFAM:PF08335,PIR:PIRSF006288,TIGRFAM:TIGR01693,NCBI_GP:EGT82703.1;Name=EGT82703.1;Ontology_term=GO:0008152,GO:0006807,GO:0008773,GO:0016597,GO:0016779;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||,amino acid binding|0016597||,nucleotidyltransferase activity|0016779||;go_process=metabolic process|0008152||,nitrogen compound metabolic process|0006807||;locus_tag=GGE_0534;product=Protein-PII uridylyltransferase;protein_id=EGT82703.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52349 54938 . + . ID=id-GGE_0534;Dbxref=InterPro:IPR010043,PIR:PIRSF006288;Note=[protein pii] uridylyltransferase~protein-pii uridylyltransferase~HAMAP:MF_00277~pii_uridylyl_transf~protein-pii uridylyltransferase;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52355 52379 . + . ID=id-GGE_0534-2;Note=seg;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52385 54905 . + . ID=id-GGE_0534-3;Note=multi-dom%3B label: glnD;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52400 52754 . + . ID=id-GGE_0534-4;Note=specific~superfamily%3B label: NT_GlnE_GlnD_like;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52421 54869 . + . ID=id-GGE_0534-5;Dbxref=InterPro:IPR010043,TIGRFAM:TIGR01693;Note=utase_glnd: protein-p-ii uridylyltransfera~protein-pii uridylyltransferase;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52451 52757 . + . ID=id-GGE_0534-6;Note=superfamily:SSF81301~nucleotidyltransferase;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52529 52649 . + . ID=id-GGE_0534-7;Note=Gene3D:3.30.460.10;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52712 54017 . + . ID=id-GGE_0534-8;Dbxref=InterPro:IPR010043;Note=HMMPanther:PTHR13734:SF1~[protein-pii] uridylyltransferase (pii uridylyl- transferase) (uridylyl removing enzyme) (utase)~protein-pii uridylyltransferase~HMMPanther:PTHR13734~family not named;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 53095 53104 . + . ID=id-GGE_0534-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=glnD;locus_tag=GGE_0534 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52478 54737 . - . ID=id-AFQR01000009.1:52478..54737;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52493 54413 . - . ID=id-AFQR01000009.1:52493..54413;Dbxref=InterPro:IPR002912,PFAM:PF01842;Note=act~amino acid-binding act;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52526 54716 . - . ID=id-AFQR01000009.1:52526..54716;Note=Gene3D:3.30.70.260;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52547 54728 . - . ID=id-AFQR01000009.1:52547..54728;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52565 54407 . - . ID=id-AFQR01000009.1:52565..54407;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52568 54713 . - . ID=id-AFQR01000009.1:52568..54713;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52628 54395 . - . ID=id-AFQR01000009.1:52628..54395;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52751 53687 . - . ID=id-AFQR01000009.1:52751..53687;Dbxref=InterPro:IPR006674,PFAM:PF01966;Note=hd~metal-dependent phosphohydrolase%2C hd subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52763 52865 . - . ID=id-AFQR01000009.1:52763..52865;Dbxref=InterPro:IPR013546,PFAM:PF08335;Note=glnd_ur_utase~pii-uridylyltransferase/glutamine-synthetase adenylyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52769 52862 . - . ID=id-AFQR01000009.1:52769..52862;Note=superfamily%3B label: GlnD_UR_UTase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52796 52838 . - . ID=id-AFQR01000009.1:52796..52838;Note=superfamily:SSF81593~nucleotidyltransferase substrate binding subunit/domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52800 52809 . - . ID=id-AFQR01000009.1:52800..52809;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52814 53681 . - . ID=id-AFQR01000009.1:52814..53681;Note=specific~superfamily%3B label: HDc;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 52934 53597 . - . ID=id-AFQR01000009.1:52934..53597;Dbxref=InterPro:IPR023279;Note=Gene3D:1.10.3210.10~hd domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 53291 53372 . - . ID=id-AFQR01000009.1:53291..53372;Note=superfamily:SSF81891~poly a polymerase c-terminal region-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 53789 53798 . - . ID=id-AFQR01000009.1:53789..53798;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 55016 56083 . + . ID=gene-GGE_0535;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank CDS 55016 56083 . + 0 ID=cds-EGT82704.1;Parent=gene-GGE_0535;Dbxref=GeneID:1172919,InterPro:IPR000715,InterPro:IPR012750,InterPro:IPR018480,PFAM:PF00953,TIGRFAM:TIGR02380,NCBI_GP:EGT82704.1;Name=EGT82704.1;Ontology_term=GO:0009103,GO:0009276,GO:0016021,GO:0000287,GO:0030145,GO:0008963,GO:0016780;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=magnesium ion binding|0000287||,manganese ion binding|0030145||,phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||,phosphotransferase activity for other substituted phosphate groups|0016780||;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_0535;product=Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=EGT82704.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55016 56060 . + . ID=id-GGE_0535;Dbxref=InterPro:IPR000715;Note=HMMPanther:PTHR22926:SF2~glycosyl transferase~HMMPanther:PTHR22926~family not named~glycosyl transferase%2C family 4;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55016 56051 . + . ID=id-GGE_0535-2;Dbxref=InterPro:IPR012750,TIGRFAM:TIGR02380;Note=eca_weca: undecaprenyl-phosphate alpha-n-ace~undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphatetransferase;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55016 55934 . + . ID=id-GGE_0535-3;Note=multi-dom%3B label: Rfe;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55028 55085 . + . ID=id-GGE_0535-4;Note=transmembrane_regions;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55118 55769 . + . ID=id-GGE_0535-5;Note=specific~superfamily%3B label: GT_MraY-like superfamily;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55223 55499 . + . ID=id-GGE_0535-6;Dbxref=InterPro:IPR000715,PFAM:PF00953;Note=glycos_transf_4~glycosyl transferase%2C family 4;gbkey=misc_feature;gene=wecA;locus_tag=GGE_0535 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55049 55463 . - . ID=id-AFQR01000009.1:55049..55463;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55052 55448 . - . ID=id-AFQR01000009.1:55052..55448;Dbxref=InterPro:IPR018480;Note=PatternScan:PS01348~mray_2~phospho-n-acetylmuramoyl-pentapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55061 56036 . - . ID=id-AFQR01000009.1:55061..56036;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55070 55481 . - . ID=id-AFQR01000009.1:55070..55481;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55070 55214 . - . ID=id-AFQR01000009.1:55070..55214;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55073 55736 . - . ID=id-AFQR01000009.1:55073..55736;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55076 55562 . - . ID=id-AFQR01000009.1:55076..55562;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55076 55286 . - . ID=id-AFQR01000009.1:55076..55286;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55085 55964 . - . ID=id-AFQR01000009.1:55085..55964;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55085 55883 . - . ID=id-AFQR01000009.1:55085..55883;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55085 55640 . - . ID=id-AFQR01000009.1:55085..55640;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55085 55388 . - . ID=id-AFQR01000009.1:55085..55388;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55085 55133 . - . ID=id-AFQR01000009.1:55085..55133;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 55735 55744 . - . ID=id-AFQR01000009.1:55735..55744;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 56372 56920 . - . ID=gene-GGE_0536;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank CDS 56372 56920 . - 0 ID=cds-EGT82705.1;Parent=gene-GGE_0536;Dbxref=GeneID:166216262,InterPro:IPR012337,InterPro:IPR013520,InterPro:IPR022894,PFAM:PF00929,NCBI_GP:EGT82705.1;Name=EGT82705.1;Ontology_term=GO:0016788,GO:0003676;gbkey=CDS;gene=orn;go_function=hydrolase activity acting on ester bonds|0016788||,nucleic acid binding|0003676||;locus_tag=GGE_0536;product=Oligoribonuclease;protein_id=EGT82705.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56378 56912 . - . ID=id-GGE_0536;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56381 56909 . - . ID=id-GGE_0536-2;Dbxref=InterPro:IPR022894;Note=HAMAP:MF_00045~oligoribonuclease~oligoribonuclease;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56384 56903 . - . ID=id-GGE_0536-3;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56387 56903 . - . ID=id-GGE_0536-4;Note=HMMPanther:PTHR11046~family not named;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56396 56888 . - . ID=id-GGE_0536-5;Note=specific~superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56396 56861 . - . ID=id-GGE_0536-6;Dbxref=InterPro:IPR013520,PFAM:PF00929;Note=exonuc_x-t~exonuclease%2C rnase t/dna polymerase iii;gbkey=misc_feature;gene=orn;locus_tag=GGE_0536 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56979 56988 . - . ID=id-AFQR01000009.1:56979..56988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 56991 58031 . + . ID=gene-GGE_0537;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank CDS 56991 58031 . + 0 ID=cds-EGT82706.1;Parent=gene-GGE_0537;Dbxref=GeneID:1176351,InterPro:IPR004881,InterPro:IPR010914,InterPro:IPR016027,PFAM:PF03193,TIGRFAM:TIGR00157,NCBI_GP:EGT82706.1;Name=EGT82706.1;Ontology_term=GO:0005525,GO:0003924;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||,GTPase activity|0003924||;locus_tag=GGE_0537;product=Putative ribosome biogenesis GTPase RsgA;protein_id=EGT82706.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 56991 58026 . + . ID=id-GGE_0537;Note=multi-dom%3B label: PRK12288;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57078 57780 . + . ID=id-GGE_0537-2;Note=HMMPanther:PTHR11649:SF48~putative ribosome biogenesis gtpase rsga~HMMPanther:PTHR11649~family not named;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57111 57183 . + . ID=id-GGE_0537-3;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57114 57885 . + . ID=id-GGE_0537-4;Dbxref=InterPro:IPR004881;Note=HAMAP:MF_01820~gtpase_rsga~ribosome biogenesis gtpase rsga%2C putative;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57120 57861 . + . ID=id-GGE_0537-5;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57213 57768 . + . ID=id-GGE_0537-6;Dbxref=InterPro:IPR004881,TIGRFAM:TIGR00157;Note=tigr00157: ribosome small subunit-dependent~ribosome biogenesis gtpase rsga%2C putative;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57327 57681 . + . ID=id-GGE_0537-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57327 57474 . + . ID=id-GGE_0537-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57351 57441 . + . ID=id-GGE_0537-9;Dbxref=InterPro:IPR010914;Note=ProfileScan:PS50936~engc_gtpase~engc gtpase;gbkey=misc_feature;gene=rsgA;locus_tag=GGE_0537 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57195 57813 . - . ID=id-AFQR01000009.1:57195..57813;Note=Gene3D:1.10.40.50;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57468 57510 . - . ID=id-AFQR01000009.1:57468..57510;Dbxref=InterPro:IPR004881,PFAM:PF03193;Note=duf258~ribosome biogenesis gtpase rsga%2C putative;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 57590 57599 . - . ID=id-AFQR01000009.1:57590..57599;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 58192 58449 . + . ID=gene-GGE_0538;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank CDS 58192 58449 . + 0 ID=cds-EGT82707.1;Parent=gene-GGE_0538;Dbxref=InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,InterPro:IPR005698,PFAM:PF00381,TIGRFAM:TIGR01003,NCBI_GP:EGT82707.1;Name=EGT82707.1;Ontology_term=GO:0009401,GO:0006810,GO:0005351;gbkey=CDS;gene=ptsH;go_function=sugar:hydrogen symporter activity|0005351||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,transport|0006810||;locus_tag=GGE_0538;product=Phosphocarrier protein HPr;protein_id=EGT82707.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58192 58447 . + . ID=id-GGE_0538;Dbxref=InterPro:IPR000032;Note=ProfileScan:PS51350~pts_hpr_dom~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature;gene=ptsH;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58192 58438 . + . ID=id-GGE_0538-2;Dbxref=InterPro:IPR005698,TIGRFAM:TIGR01003;Note=pts_hpr_family: phosphocarrier%2C hpr f~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature;gene=ptsH;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58192 58435 . + . ID=id-GGE_0538-3;Dbxref=InterPro:IPR000032,InterPro:IPR005698,PFAM:PF00381;Note=Gene3D:3.30.1340.10~phosphotransferase system%2C phosphocarrier hpr like protein~pts-hpr~phosphotransferase system%2C phosphocarrier hpr protein~superfamily:SSF55594~hpr-like~phosphotransferase system%2C phosphocarrier hpr like protein;gbkey=misc_feature;gene=ptsH;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58210 58420 . + . ID=id-GGE_0538-4;Note=specific~superfamily%3B label: PTS-HPr_like;gbkey=misc_feature;gene=ptsH;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58231 58243 . + . ID=id-GGE_0538-5;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature;gene=ptsH;locus_tag=GGE_0538 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58216 58231 . - . ID=id-AFQR01000009.1:58216..58231;Dbxref=InterPro:IPR001020;Note=PatternScan:PS00369~pts_hpr_his~phosphotransferase system%2C hpr histidine phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58240 58309 . - . ID=id-AFQR01000009.1:58240..58309;Dbxref=InterPro:IPR002114;Note=PatternScan:PS00589~pts_hpr_ser~phosphotransferase system%2C hpr serine phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58240 58306 . - . ID=id-AFQR01000009.1:58240..58306;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58246 58351 . - . ID=id-AFQR01000009.1:58246..58351;Dbxref=InterPro:IPR005698;Note=FPrintScan:PR00107~phosphocphpr~phosphotransferase system%2C phosphocarrier hpr protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 58529 60256 . + . ID=gene-GGE_0539;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank CDS 58529 60256 . + 0 ID=cds-EGT82708.1;Parent=gene-GGE_0539;Dbxref=GeneID:1172700,InterPro:IPR000121,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,InterPro:IPR015813,InterPro:IPR018274,InterPro:IPR023151,PFAM:PF00391,PFAM:PF02896,PFAM:PF05524,TIGRFAM:TIGR01417,NCBI_GP:EGT82708.1;Name=EGT82708.1;Ontology_term=GO:0009401,GO:0016310,GO:0005737,GO:0003824,GO:0008965,GO:0005351,GO:0016772;gbkey=CDS;gene=ptsI;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,phosphoenolpyruvate-protein phosphotransferase activity|0008965||,sugar:hydrogen symporter activity|0005351||,transferase activity transferring phosphorus-containing groups|0016772||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,phosphorylation|0016310||;locus_tag=GGE_0539;product=Phosphoenolpyruvate-protein phosphotransferase;protein_id=EGT82708.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58529 60254 . + . ID=id-GGE_0539;Note=multi-dom%3B label: PRK11177;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58535 60224 . + . ID=id-GGE_0539-2;Dbxref=InterPro:IPR006318,TIGRFAM:TIGR01417;Note=pts_i_fam: phosphoenolpyruvate-protein phos~phosphoenolpyruvate-protein phosphotransferase;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58535 58907 . + . ID=id-GGE_0539-3;Note=superfamily%3B label: PEP-utilizers_N superfamily;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58538 58904 . + . ID=id-GGE_0539-4;Dbxref=InterPro:IPR008731,PFAM:PF05524;Note=pep-utilisers_n~phosphotransferase system%2C pep-utilising enzyme;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58574 60209 . + . ID=id-GGE_0539-5;Note=HMMPanther:PTHR22931:SF10~phosphoenolpyruvate-protein phosphotransferase~HMMPanther:PTHR22931~family not named;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58595 58898 . + . ID=id-GGE_0539-6;Dbxref=InterPro:IPR008731;Note=superfamily:SSF47831~enzyme i of the pep:sugar phosphotransferase system hpr-binding (sub)domain~phosphotransferase system%2C pep-utilising enzyme;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58604 58853 . + . ID=id-GGE_0539-7;Dbxref=InterPro:IPR008731;Note=Gene3D:1.10.274.10~phosphotransferase system%2C pep-utilising enzyme;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58850 58904 . + . ID=id-GGE_0539-8;Dbxref=InterPro:IPR008279;Note=superfamily:SSF52009~phosphohistidine domain~pep-utilising enzyme%2C mobile domain;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 59273 59438 . + . ID=id-GGE_0539-9;Dbxref=InterPro:IPR015813;Note=superfamily:SSF51621~phosphoenolpyruvate/pyruvate domain~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 59279 59408 . + . ID=id-GGE_0539-10;Note=superfamily%3B label: malate_synt superfamily;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 59279 59405 . + . ID=id-GGE_0539-11;Dbxref=InterPro:IPR000121,PFAM:PF02896;Note=pep-utilizers_c~pep-utilising enzyme;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 59297 59477 . + . ID=id-GGE_0539-12;Dbxref=InterPro:IPR015813;Note=Gene3D:3.20.20.60~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature;gene=ptsI;locus_tag=GGE_0539 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58565 59081 . - . ID=id-AFQR01000009.1:58565..59081;Dbxref=InterPro:IPR018274;Note=PatternScan:PS00370~pep_enzymes_phos_site~pep-utilising enzyme%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58568 60029 . - . ID=id-AFQR01000009.1:58568..60029;Dbxref=InterPro:IPR006318;Note=FPrintScan:PR01736~phphtrnfrase~phosphoenolpyruvate-protein phosphotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58568 58766 . - . ID=id-AFQR01000009.1:58568..58766;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58577 59921 . - . ID=id-AFQR01000009.1:58577..59921;Dbxref=InterPro:IPR006318;Note=FPrintScan:PR01736~phphtrnfrase~phosphoenolpyruvate-protein phosphotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58577 59870 . - . ID=id-AFQR01000009.1:58577..59870;Dbxref=InterPro:IPR006318;Note=FPrintScan:PR01736~phphtrnfrase~phosphoenolpyruvate-protein phosphotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58586 59870 . - . ID=id-AFQR01000009.1:58586..59870;Dbxref=InterPro:IPR023151;Note=PatternScan:PS00742~pep_enzymes_2~pep-utilising enzyme%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58589 59408 . - . ID=id-AFQR01000009.1:58589..59408;Dbxref=InterPro:IPR006318;Note=FPrintScan:PR01736~phphtrnfrase~phosphoenolpyruvate-protein phosphotransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58616 59705 . - . ID=id-AFQR01000009.1:58616..59705;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58616 59225 . - . ID=id-AFQR01000009.1:58616..59225;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58748 58985 . - . ID=id-AFQR01000009.1:58748..58985;Note=superfamily%3B label: PEP-utilizers superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58751 58982 . - . ID=id-AFQR01000009.1:58751..58982;Dbxref=InterPro:IPR008279,PFAM:PF00391;Note=pep-utilizers~pep-utilising enzyme%2C mobile domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 58898 58928 . - . ID=id-AFQR01000009.1:58898..58928;Dbxref=InterPro:IPR008279;Note=Gene3D:3.50.30.10~pep-utilising enzyme%2C mobile domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 60317 60817 . + . ID=gene-GGE_0540;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank CDS 60317 60817 . + 0 ID=cds-EGT82709.1;Parent=gene-GGE_0540;Dbxref=GeneID:1172715,InterPro:IPR001127,InterPro:IPR011055,PFAM:PF00358,TIGRFAM:TIGR00830,NCBI_GP:EGT82709.1;Name=EGT82709.1;Ontology_term=GO:0009401,GO:0006810,GO:0016020,GO:0005351;gbkey=CDS;gene=crr;go_component=membrane|0016020||;go_function=sugar:hydrogen symporter activity|0005351||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,transport|0006810||;locus_tag=GGE_0540;product=Glucose-specific phosphotransferase enzyme IIA component;protein_id=EGT82709.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60350 60779 . + . ID=id-GGE_0540;Dbxref=InterPro:IPR011055;Note=superfamily:SSF51261~protein~protein;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60350 60770 . + . ID=id-GGE_0540-2;Note=Gene3D:2.70.70.10;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60368 60704 . + . ID=id-GGE_0540-3;Dbxref=InterPro:IPR001127,PFAM:PF00358;Note=pts_eiia_1~phosphotransferase system%2C sugar-specific permease eiia 1 domain;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60377 60689 . + . ID=id-GGE_0540-4;Note=superfamily%3B label: PTS_IIA_glc superfamily;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60377 60680 . + . ID=id-GGE_0540-5;Dbxref=InterPro:IPR001127,TIGRFAM:TIGR00830;Note=ptba: pts system%2C glucose subfamily%2C iia com~phosphotransferase system%2C sugar-specific permease eiia 1 domain;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60425 60632 . + . ID=id-GGE_0540-6;Dbxref=InterPro:IPR001127;Note=ProfileScan:PS51093~pts_eiia_type_1~phosphotransferase system%2C sugar-specific permease eiia 1 domain;gbkey=misc_feature;gene=crr;locus_tag=GGE_0540 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60356 60563 . - . ID=id-AFQR01000009.1:60356..60563;Dbxref=InterPro:IPR001127;Note=PatternScan:PS00371~pts_eiia_type_1_his~phosphotransferase system%2C sugar-specific permease eiia 1 domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 60896 62110 . + . ID=gene-GGE_0541;Name=GGE_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank CDS 60896 62110 . + 0 ID=cds-EGT82710.1;Parent=gene-GGE_0541;Dbxref=GeneID:52424669,InterPro:IPR001250,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR016305,InterPro:IPR018050,PFAM:PF01238,PIR:PIRSF001480,TIGRFAM:TIGR00218,NCBI_GP:EGT82710.1;Name=EGT82710.1;Note=YP_087806;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||,zinc ion binding|0008270||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0541;product=ManA protein;protein_id=EGT82710.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60902 62105 . + . ID=id-GGE_0541;Dbxref=InterPro:IPR016305,PIR:PIRSF001480;Note=mannose-6-phosphate isomerase~mannose-6-phosphate isomerase;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60905 62066 . + . ID=id-GGE_0541-2;Dbxref=InterPro:IPR011051;Note=superfamily:SSF51182~rmlc-like cupins~cupin%2C rmlc-type;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60908 62087 . + . ID=id-GGE_0541-3;Dbxref=InterPro:IPR001250,TIGRFAM:TIGR00218;Note=mana: mannose-6-phosphate isomerase%2C class i~mannose-6-phosphate isomerase%2C type i;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60911 62057 . + . ID=id-GGE_0541-4;Note=HMMPanther:PTHR10309~mannose-6-phosphate isomerase;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60917 61973 . + . ID=id-GGE_0541-5;Dbxref=InterPro:IPR001250,PFAM:PF01238;Note=multi-dom~pmi_typei~mannose-6-phosphate isomerase%2C type i%3B label: PMI_typeI;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60923 62033 . + . ID=id-GGE_0541-6;Note=superfamily%3B label: PRK15131 superfamily;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60926 60953 . + . ID=id-GGE_0541-7;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature;locus_tag=GGE_0541 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60923 61289 . - . ID=id-AFQR01000009.1:60923..61289;Dbxref=InterPro:IPR018050;Note=PatternScan:PS00965~pmi_i_1~phosphomannose isomerase%2C type i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60944 61010 . - . ID=id-AFQR01000009.1:60944..61010;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60956 61757 . - . ID=id-AFQR01000009.1:60956..61757;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60956 61754 . - . ID=id-AFQR01000009.1:60956..61754;Note=Gene3D:1.10.441.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60956 61700 . - . ID=id-AFQR01000009.1:60956..61700;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60956 61643 . - . ID=id-AFQR01000009.1:60956..61643;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60962 61154 . - . ID=id-AFQR01000009.1:60962..61154;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 60968 61289 . - . ID=id-AFQR01000009.1:60968..61289;Dbxref=InterPro:IPR016305;Note=FPrintScan:PR00714~man6pismrase~mannose-6-phosphate isomerase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 61013 61637 . - . ID=id-AFQR01000009.1:61013..61637;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 61034 61973 . - . ID=id-AFQR01000009.1:61034..61973;Note=BlastProDom:PD049684~y1710_haein_p44294;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 61136 61832 . - . ID=id-AFQR01000009.1:61136..61832;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62002 62011 . - . ID=id-AFQR01000009.1:62002..62011;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 62194 63111 . + . ID=gene-GGE_0542;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank CDS 62194 63111 . + 0 ID=cds-EGT82711.1;Parent=gene-GGE_0542;Dbxref=InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR018080,PFAM:PF01145,NCBI_GP:EGT82711.1;Name=EGT82711.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||;locus_tag=GGE_0542;product=Protein QmcA;protein_id=EGT82711.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62194 63085 . + . ID=id-GGE_0542;Dbxref=InterPro:IPR001972;Note=HMMPanther:PTHR10264:SF27~uncharacterized~HMMPanther:PTHR10264~band 7 protein-related~stomatin;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62209 62254 . + . ID=id-GGE_0542-2;Note=transmembrane_regions;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62224 62230 . + . ID=id-GGE_0542-3;Note=seg;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 63022 . + . ID=id-GGE_0542-4;Note=multi-dom%3B label: HflC;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62269 62707 . + . ID=id-GGE_0542-5;Dbxref=InterPro:IPR001107,PFAM:PF01145;Note=band_7~band 7 protein;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62275 62764 . + . ID=id-GGE_0542-6;Note=specific~superfamily%3B label: Band_7 superfamily;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62353 62599 . + . ID=id-GGE_0542-7;Note=superfamily:SSF117892~band 7/spfh domain;gbkey=misc_feature;gene=qmcA;locus_tag=GGE_0542 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62248 62530 . - . ID=id-AFQR01000009.1:62248..62530;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62251 62662 . - . ID=id-AFQR01000009.1:62251..62662;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 62869 . - . ID=id-AFQR01000009.1:62260..62869;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 62782 . - . ID=id-AFQR01000009.1:62260..62782;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 62719 . - . ID=id-AFQR01000009.1:62260..62719;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 62713 . - . ID=id-AFQR01000009.1:62260..62713;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62260 62425 . - . ID=id-AFQR01000009.1:62260..62425;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62266 62848 . - . ID=id-AFQR01000009.1:62266..62848;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62266 62590 . - . ID=id-AFQR01000009.1:62266..62590;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 62281 62602 . - . ID=id-AFQR01000009.1:62281..62602;Dbxref=InterPro:IPR018080;Note=PatternScan:PS01270~band_7~band 7/stomatin-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63118 63127 . + . ID=id-AFQR01000009.1:63118..63127;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 63195 63647 . + . ID=gene-GGE_0543;Name=GGE_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0543 GCA_000222085.2|AFQR01000009.1 Genbank CDS 63195 63647 . + 0 ID=cds-EGT82712.1;Parent=gene-GGE_0543;Dbxref=GeneID:301156559,InterPro:IPR002810,InterPro:IPR012340,PFAM:PF01957,NCBI_GP:EGT82712.1;Name=EGT82712.1;Note=CBW16030;gbkey=CDS;locus_tag=GGE_0543;product=conserved inner membrane protein;protein_id=EGT82712.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63216 63621 . + . ID=id-GGE_0543;Note=superfamily%3B label: NfeD superfamily;gbkey=misc_feature;locus_tag=GGE_0543 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63231 63606 . + . ID=id-GGE_0543-2;Dbxref=InterPro:IPR002810,PFAM:PF01957;Note=nfed~nodulation efficiency%2C nfed;gbkey=misc_feature;locus_tag=GGE_0543 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63234 63264 . + . ID=id-GGE_0543-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0543 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63219 63348 . - . ID=id-AFQR01000009.1:63219..63348;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63264 63345 . - . ID=id-AFQR01000009.1:63264..63345;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63357 63480 . - . ID=id-AFQR01000009.1:63357..63480;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63728 63737 . - . ID=id-AFQR01000009.1:63728..63737;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 63743 64510 . - . ID=gene-GGE_0544;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank CDS 63743 64510 . - 0 ID=cds-EGT82713.1;Parent=gene-GGE_0544;Dbxref=GeneID:1709071,InterPro:IPR000847,InterPro:IPR003725,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011991,InterPro:IPR016462,PFAM:PF00126,PFAM:PF03459,PIR:PIRSF005763,TIGRFAM:TIGR00637,TIGRFAM:TIGR00638,NCBI_GP:EGT82713.1;Name=EGT82713.1;Ontology_term=GO:0015689,GO:0006355,GO:0006810,GO:0043190,GO:0005524,GO:0016820,GO:0015098,GO:0015412,GO:0030151,GO:0003700,GO:0005215;gbkey=CDS;gene=modE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||;go_function=ATP binding|0005524||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,molybdate ion transmembrane transporter activity|0015098||,molybdate transmembrane-transporting ATPase activity|0015412||,molybdenum ion binding|0030151||,sequence-specific DNA binding transcription factor activity|0003700||,transporter activity|0005215||;go_process=molybdate ion transport|0015689||,regulation of transcription DNA-dependent|0006355||,transport|0006810||;locus_tag=GGE_0544;product=Transcriptional regulator modE;protein_id=EGT82713.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63743 64508 . - . ID=id-GGE_0544;Dbxref=InterPro:IPR016462,PIR:PIRSF005763;Note=molybdate-dependent transcriptional regulator%2C mode type~molybdate-dependent transcriptional regulator%2C mode;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63743 64145 . - . ID=id-GGE_0544-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63755 64091 . - . ID=id-GGE_0544-3;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63758 64493 . - . ID=id-GGE_0544-4;Note=multi-dom%3B label: PRK10676;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63758 64124 . - . ID=id-GGE_0544-5;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63794 64037 . - . ID=id-GGE_0544-6;Dbxref=InterPro:IPR003725,TIGRFAM:TIGR00637;Note=mode_repress: mode molybdate transport r~molybdenum-binding protein;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63809 63929 . - . ID=id-GGE_0544-7;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=hth_1~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=modE;locus_tag=GGE_0544 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63935 64118 . + . ID=id-AFQR01000009.1:63935..64118;Dbxref=InterPro:IPR005116,PFAM:PF03459;Note=tobe~transport-associated ob%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63944 64103 . + . ID=id-AFQR01000009.1:63944..64103;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63950 64112 . + . ID=id-AFQR01000009.1:63950..64112;Note=superfamily%3B label: TOBE_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63956 64112 . + . ID=id-AFQR01000009.1:63956..64112;Dbxref=InterPro:IPR004606,TIGRFAM:TIGR00638;Note=mop: molybdenum-pterin binding domain~molybdenum-pterin binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 63974 64112 . + . ID=id-AFQR01000009.1:63974..64112;Dbxref=InterPro:IPR008995;Note=superfamily:SSF50331~mop-like~molybdate/tungstate binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 64634 65398 . + . ID=gene-GGE_0545;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank CDS 64634 65398 . + 0 ID=cds-EGT82714.1;Parent=gene-GGE_0545;Dbxref=GeneID:1170988,InterPro:IPR005950,InterPro:IPR006059,PFAM:PF01547,TIGRFAM:TIGR01256,NCBI_GP:EGT82714.1;Name=EGT82714.1;Ontology_term=GO:0015689,GO:0006810,GO:0030288,GO:0015412,GO:0005215;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=molybdate transmembrane-transporting ATPase activity|0015412||,transporter activity|0005215||;go_process=molybdate ion transport|0015689||,transport|0006810||;locus_tag=GGE_0545;product=Molybdate-binding periplasmic protein;protein_id=EGT82714.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64655 64703 . + . ID=id-GGE_0545;Note=transmembrane_regions;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64706 65318 . + . ID=id-GGE_0545-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64727 65294 . + . ID=id-GGE_0545-3;Dbxref=InterPro:IPR005950,TIGRFAM:TIGR01256;Note=moda: molybdate abc transporter%2C periplasmic~molybdenum abc transporter%2C periplasmic binding protein;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64727 65273 . + . ID=id-GGE_0545-4;Dbxref=InterPro:IPR006059,PFAM:PF01547;Note=sbp_bac_1~bacterial extracellular solute-binding%2C family 1;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64736 65297 . + . ID=id-GGE_0545-5;Note=superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64973 64982 . + . ID=id-GGE_0545-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=modA;locus_tag=GGE_0545 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64657 64666 . - . ID=id-AFQR01000009.1:64657..64666;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64682 64688 . - . ID=id-AFQR01000009.1:64682..64688;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64733 65282 . - . ID=id-AFQR01000009.1:64733..65282;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 64934 64982 . - . ID=id-AFQR01000009.1:64934..64982;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 65532 66260 . + . ID=gene-GGE_0546;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank CDS 65532 66260 . + 0 ID=cds-EGT82715.1;Parent=gene-GGE_0546;Dbxref=GeneID:1170989,InterPro:IPR000515,InterPro:IPR011867,PFAM:PF00528,TIGRFAM:TIGR02141,NCBI_GP:EGT82715.1;Name=EGT82715.1;Ontology_term=GO:0015689,GO:0006810,GO:0016021,GO:0016020,GO:0015098,GO:0005215;gbkey=CDS;gene=modB;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=molybdate ion transmembrane transporter activity|0015098||,transporter activity|0005215||;go_process=molybdate ion transport|0015689||,transport|0006810||;locus_tag=GGE_0546;product=Molybdenum transport system permease protein modB;protein_id=EGT82715.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65556 66213 . + . ID=id-GGE_0546;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65589 66159 . + . ID=id-GGE_0546-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65592 66165 . + . ID=id-GGE_0546-3;Dbxref=InterPro:IPR011867,TIGRFAM:TIGR02141;Note=modb_abc: molybdate abc transporter%2C permeas~molybdate abc transporter%2C permease protein;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65598 66063 . + . ID=id-GGE_0546-4;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65601 65601 . + . ID=id-GGE_0546-5;Note=transmembrane_regions;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65634 66132 . + . ID=id-GGE_0546-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=modB;locus_tag=GGE_0546 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65565 66174 . - . ID=id-AFQR01000009.1:65565..66174;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65577 65982 . - . ID=id-AFQR01000009.1:65577..65982;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65592 65703 . - . ID=id-AFQR01000009.1:65592..65703;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65601 66147 . - . ID=id-AFQR01000009.1:65601..66147;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65601 65964 . - . ID=id-AFQR01000009.1:65601..65964;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65601 65814 . - . ID=id-AFQR01000009.1:65601..65814;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 65601 65703 . - . ID=id-AFQR01000009.1:65601..65703;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 66247 67302 . + . ID=gene-GGE_0547;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank CDS 66247 67302 . + 0 ID=cds-EGT82716.1;Parent=gene-GGE_0547;Dbxref=GeneID:1170991,InterPro:IPR003439,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011868,InterPro:IPR015852,InterPro:IPR017871,PFAM:PF00005,PFAM:PF03459,TIGRFAM:TIGR02142,NCBI_GP:EGT82716.1;Name=EGT82716.1;Ontology_term=GO:0030001,GO:0015689,GO:0006810,GO:0043190,GO:0009276,GO:0016020,GO:0005524,GO:0016887,GO:0016820,GO:0015098,GO:0042888,GO:0005215;gbkey=CDS;gene=modC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||,Gram-negative-bacterium-type cell wall|0009276||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,molybdate ion transmembrane transporter activity|0015098||,molybdenum ion transmembrane transporter activity|0042888||,transporter activity|0005215||;go_process=metal ion transport|0030001||,molybdate ion transport|0015689||,transport|0006810||;locus_tag=GGE_0547;product=Molybdenum import ATP-binding protein ModC;protein_id=EGT82716.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66247 67300 . + . ID=id-GGE_0547;Note=multi-dom%3B label: modC;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66247 66934 . + . ID=id-GGE_0547-2;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66247 66880 . + . ID=id-GGE_0547-3;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66253 67297 . + . ID=id-GGE_0547-4;Dbxref=InterPro:IPR011868,TIGRFAM:TIGR02142;Note=modc_abc: molybdate abc transporter%2C atp-bin~molybdate abc transporter%2C atp-binding protein;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66295 66859 . + . ID=id-GGE_0547-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66298 66856 . + . ID=id-GGE_0547-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66301 66847 . + . ID=id-GGE_0547-7;Note=HMMPanther:PTHR24220:SF49~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66361 66604 . + . ID=id-GGE_0547-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=modC;locus_tag=GGE_0547 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66292 66634 . - . ID=id-AFQR01000009.1:66292..66634;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66421 66430 . - . ID=id-AFQR01000009.1:66421..66430;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66433 67117 . - . ID=id-AFQR01000009.1:66433..67117;Dbxref=InterPro:IPR005116,PFAM:PF03459;Note=tobe~transport-associated ob%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66436 67114 . - . ID=id-AFQR01000009.1:66436..67114;Dbxref=InterPro:IPR008995;Note=Gene3D:2.40.50.100~superfamily:SSF50331~mop-like~molybdate/tungstate binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66439 67111 . - . ID=id-AFQR01000009.1:66439..67111;Note=superfamily%3B label: TOBE_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66721 66829 . - . ID=id-AFQR01000009.1:66721..66829;Dbxref=InterPro:IPR015852;Note=ProfileScan:PS51241~modc~abc transporter%2C molybdenum import%2C modc;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 66990 66999 . - . ID=id-AFQR01000009.1:66990..66999;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67310 67319 . - . ID=id-AFQR01000009.1:67310..67319;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67426 67435 . - . ID=id-AFQR01000009.1:67426..67435;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 67652 69679 . + . ID=gene-GGE_0548;Name=GGE_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank CDS 67652 69679 . + 0 ID=cds-EGT82717.1;Parent=gene-GGE_0548;Dbxref=GeneID:145631586,InterPro:IPR000060,InterPro:IPR018093,PFAM:PF02028,TIGRFAM:TIGR00842,NCBI_GP:EGT82717.1;Name=EGT82717.1;Note=ZP_01787352;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0548;product=glucose-specific PTS system enzyme IIA component;protein_id=EGT82717.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67676 69605 . + . ID=id-GGE_0548;Note=multi-dom%3B label: PRK09928;gbkey=misc_feature;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67691 67721 . + . ID=id-GGE_0548-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67703 69110 . + . ID=id-GGE_0548-3;Note=superfamily%3B label: BCCT superfamily;gbkey=misc_feature;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67706 69101 . + . ID=id-GGE_0548-4;Dbxref=InterPro:IPR000060,PFAM:PF02028;Note=bcct~bcct transporter family;gbkey=misc_feature;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67817 68996 . + . ID=id-GGE_0548-5;Dbxref=InterPro:IPR000060,TIGRFAM:TIGR00842;Note=bcct: transporter%2C betaine/carnitine/choline~bcct transporter family;gbkey=misc_feature;locus_tag=GGE_0548 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67682 68609 . - . ID=id-AFQR01000009.1:67682..68609;Dbxref=InterPro:IPR018093;Note=PatternScan:PS01303~bcct~bcct transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67697 68447 . - . ID=id-AFQR01000009.1:67697..68447;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67712 68705 . - . ID=id-AFQR01000009.1:67712..68705;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 69086 . - . ID=id-AFQR01000009.1:67721..69086;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68990 . - . ID=id-AFQR01000009.1:67721..68990;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68885 . - . ID=id-AFQR01000009.1:67721..68885;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68600 . - . ID=id-AFQR01000009.1:67721..68600;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68453 . - . ID=id-AFQR01000009.1:67721..68453;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68348 . - . ID=id-AFQR01000009.1:67721..68348;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68237 . - . ID=id-AFQR01000009.1:67721..68237;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 68081 . - . ID=id-AFQR01000009.1:67721..68081;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 67931 . - . ID=id-AFQR01000009.1:67721..67931;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 67721 67802 . - . ID=id-AFQR01000009.1:67721..67802;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 69715 71190 . - . ID=gene-GGE_0549;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank CDS 69715 71190 . - 0 ID=cds-EGT82718.1;Parent=gene-GGE_0549;Dbxref=GeneID:166215781,InterPro:IPR000819,InterPro:IPR008283,InterPro:IPR011356,InterPro:IPR023042,PFAM:PF00883,PFAM:PF02789,NCBI_GP:EGT82718.1;Name=EGT82718.1;Ontology_term=GO:0019538,GO:0006508,GO:0005737,GO:0005622,GO:0004177,GO:0030145,GO:0008235;gbkey=CDS;gene=pepA;go_component=cytoplasm|0005737||,intracellular|0005622||;go_function=aminopeptidase activity|0004177||,manganese ion binding|0030145||,metalloexopeptidase activity|0008235||;go_process=protein metabolic process|0019538||,proteolysis|0006508||;locus_tag=GGE_0549;product=Putative cytosol aminopeptidase;protein_id=EGT82718.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69715 71182 . - . ID=id-GGE_0549;Note=multi-dom%3B label: PRK00913;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69715 70249 . - . ID=id-GGE_0549-2;Note=superfamily:SSF52949~macro domain-like;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69715 70237 . - . ID=id-GGE_0549-3;Note=Gene3D:3.40.220.10;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69721 71185 . - . ID=id-GGE_0549-4;Dbxref=InterPro:IPR023042;Note=HAMAP:MF_00181~cytosol_peptidase_m17~peptidase%2C m17%2C probable cytosol aminopeptidase;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69727 71173 . - . ID=id-GGE_0549-5;Dbxref=InterPro:IPR011356;Note=HMMPanther:PTHR11963:SF3~leucine aminopeptidase~peptidase m17~HMMPanther:PTHR11963~family not named;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69757 71134 . - . ID=id-GGE_0549-6;Note=specific~superfamily%3B label: Peptidase_M17;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69769 70102 . - . ID=id-GGE_0549-7;Dbxref=InterPro:IPR008283,PFAM:PF02789;Note=peptidase_m17_n~peptidase m17%2C leucyl aminopeptidase;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 70234 70666 . - . ID=id-GGE_0549-8;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 70240 70663 . - . ID=id-GGE_0549-9;Note=Gene3D:3.40.630.10;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 70252 70633 . - . ID=id-GGE_0549-10;Dbxref=InterPro:IPR000819,PFAM:PF00883;Note=peptidase_m17~peptidase m17%2C leucyl aminopeptidase;gbkey=misc_feature;gene=pepA;locus_tag=GGE_0549 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69739 70744 . + . ID=id-AFQR01000009.1:69739..70744;Dbxref=InterPro:IPR000819;Note=PatternScan:PS00631~cytosol_ap~peptidase m17%2C leucyl aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69754 70204 . + . ID=id-AFQR01000009.1:69754..70204;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69763 70816 . + . ID=id-AFQR01000009.1:69763..70816;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69769 70489 . + . ID=id-AFQR01000009.1:69769..70489;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69778 70732 . + . ID=id-AFQR01000009.1:69778..70732;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69781 70666 . + . ID=id-AFQR01000009.1:69781..70666;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 69781 70555 . + . ID=id-AFQR01000009.1:69781..70555;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 70556 70565 . + . ID=id-AFQR01000009.1:70556..70565;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 71298 72392 . + . ID=gene-GGE_0550;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=GGE_0550 GCA_000222085.2|AFQR01000009.1 Genbank CDS 71298 72392 . + 0 ID=cds-EGT82719.1;Parent=gene-GGE_0550;Dbxref=InterPro:IPR005495,PFAM:PF03739,NCBI_GP:EGT82719.1;Name=EGT82719.1;Ontology_term=GO:0016021;gbkey=CDS;gene=lptF;go_component=integral to membrane|0016021||;locus_tag=GGE_0550;product=Lipopolysaccharide export system permease protein lptF;protein_id=EGT82719.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71298 72390 . + . ID=id-GGE_0550;Note=superfamily%3B label: COG0795 superfamily;gbkey=misc_feature;gene=lptF;locus_tag=GGE_0550 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71313 72321 . + . ID=id-GGE_0550-2;Dbxref=InterPro:IPR005495,PFAM:PF03739;Note=multi-dom~yjgp_yjgq~permease yjgp/yjgq%2C predicted%3B label: YjgP_YjgQ;gbkey=misc_feature;gene=lptF;locus_tag=GGE_0550 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71334 71367 . + . ID=id-GGE_0550-3;Note=transmembrane_regions;gbkey=misc_feature;gene=lptF;locus_tag=GGE_0550 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71328 71352 . - . ID=id-AFQR01000009.1:71328..71352;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71349 72186 . - . ID=id-AFQR01000009.1:71349..72186;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71352 72186 . - . ID=id-AFQR01000009.1:71352..72186;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71358 72282 . - . ID=id-AFQR01000009.1:71358..72282;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71367 72099 . - . ID=id-AFQR01000009.1:71367..72099;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71367 71589 . - . ID=id-AFQR01000009.1:71367..71589;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 71367 71460 . - . ID=id-AFQR01000009.1:71367..71460;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 72398 73474 . + . ID=gene-GGE_0551;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=GGE_0551 GCA_000222085.2|AFQR01000009.1 Genbank CDS 72398 73474 . + 0 ID=cds-EGT82720.1;Parent=gene-GGE_0551;Dbxref=InterPro:IPR005495,PFAM:PF03739,NCBI_GP:EGT82720.1;Name=EGT82720.1;Ontology_term=GO:0016021;gbkey=CDS;gene=lptG;go_component=integral to membrane|0016021||;locus_tag=GGE_0551;product=Lipopolysaccharide export system permease protein lptG;protein_id=EGT82720.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72398 73469 . + . ID=id-GGE_0551;Note=superfamily%3B label: COG0795 superfamily;gbkey=misc_feature;gene=lptG;locus_tag=GGE_0551 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72419 73445 . + . ID=id-GGE_0551-2;Dbxref=InterPro:IPR005495,PFAM:PF03739;Note=multi-dom~yjgp_yjgq~permease yjgp/yjgq%2C predicted%3B label: YjgP_YjgQ;gbkey=misc_feature;gene=lptG;locus_tag=GGE_0551 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72434 72467 . + . ID=id-GGE_0551-3;Note=transmembrane_regions;gbkey=misc_feature;gene=lptG;locus_tag=GGE_0551 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72443 72602 . - . ID=id-AFQR01000009.1:72443..72602;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72452 72593 . - . ID=id-AFQR01000009.1:72452..72593;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72458 73400 . - . ID=id-AFQR01000009.1:72458..73400;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72458 73226 . - . ID=id-AFQR01000009.1:72458..73226;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72467 73304 . - . ID=id-AFQR01000009.1:72467..73304;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 72467 72704 . - . ID=id-AFQR01000009.1:72467..72704;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 73507 74403 . + . ID=gene-GGE_0552;Name=GGE_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank CDS 73507 74403 . + 0 ID=cds-EGT82721.1;Parent=gene-GGE_0552;Dbxref=GeneID:315635021,InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,NCBI_GP:EGT82721.1;Name=EGT82721.1;Note=ZP_07890302;Ontology_term=GO:0006629,GO:0008152;gbkey=CDS;go_process=lipid metabolic process|0006629||,metabolic process|0008152||;locus_tag=GGE_0552;product=alpha-beta hydrolase superfamily esterase;protein_id=EGT82721.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73558 74317 . + . ID=id-GGE_0552;Dbxref=InterPro:IPR016035;Note=superfamily:SSF52151~fabd/lysophospholipase-like~acyl transferase/acyl hydrolase/lysophospholipase;gbkey=misc_feature;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73564 74347 . + . ID=id-GGE_0552-2;Note=multi-dom%3B label: COG4667;gbkey=misc_feature;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73570 73576 . + . ID=id-GGE_0552-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73576 74296 . + . ID=id-GGE_0552-4;Note=specific~superfamily%3B label: Patatin_and_cPLA2 superfamily;gbkey=misc_feature;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73576 74002 . + . ID=id-GGE_0552-5;Dbxref=InterPro:IPR002641,PFAM:PF01734;Note=patatin~patatin/phospholipase a2-related;gbkey=misc_feature;locus_tag=GGE_0552 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 73567 73648 . - . ID=id-AFQR01000009.1:73567..73648;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 74449 77091 . - . ID=gene-GGE_0553;Name=GGE_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0553 GCA_000222085.2|AFQR01000009.1 Genbank CDS 74449 77091 . - 0 ID=cds-EGT82722.1;Parent=gene-GGE_0553;Dbxref=GeneID:1176069,InterPro:IPR003399,PFAM:PF02470,NCBI_GP:EGT82722.1;Name=EGT82722.1;Note=HI_1672;gbkey=CDS;locus_tag=GGE_0553;product=putative mammalian cell entry-like protein;protein_id=EGT82722.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74488 76144 . - . ID=id-GGE_0553;Note=multi-dom%3B label: PqiB;gbkey=misc_feature;locus_tag=GGE_0553 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74602 74728 . - . ID=id-GGE_0553-2;Note=superfamily%3B label: MCE superfamily;gbkey=misc_feature;locus_tag=GGE_0553 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74605 74725 . - . ID=id-GGE_0553-3;Dbxref=InterPro:IPR003399,PFAM:PF02470;Note=mce~mammalian cell entry-related;gbkey=misc_feature;locus_tag=GGE_0553 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 75658 75835 . - . ID=id-GGE_0553-4;Note=multi-dom%3B label: PqiB;gbkey=misc_feature;locus_tag=GGE_0553 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74518 74527 . + . ID=id-AFQR01000009.1:74518..74527;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74623 76705 . + . ID=id-AFQR01000009.1:74623..76705;Dbxref=InterPro:IPR003399,PFAM:PF02470;Note=mce~mammalian cell entry-related;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74653 76693 . + . ID=id-AFQR01000009.1:74653..76693;Note=superfamily%3B label: MCE superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74710 76363 . + . ID=id-AFQR01000009.1:74710..76363;Dbxref=InterPro:IPR003399,PFAM:PF02470;Note=mce~mammalian cell entry-related;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 74716 76357 . + . ID=id-AFQR01000009.1:74716..76357;Note=superfamily%3B label: MCE superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 77075 78325 . - . ID=gene-GGE_0554;Name=GGE_0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0554 GCA_000222085.2|AFQR01000009.1 Genbank CDS 77075 78325 . - 0 ID=cds-EGT82723.1;Parent=gene-GGE_0554;Dbxref=GeneID:229845077,InterPro:IPR005219,InterPro:IPR007498,PFAM:PF04403,TIGRFAM:TIGR00155,NCBI_GP:EGT82723.1;Name=EGT82723.1;Note=ZP_04465213;gbkey=CDS;locus_tag=GGE_0554;product=putative paraquat-inducible protein A;protein_id=EGT82723.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77075 78308 . - . ID=id-GGE_0554;Dbxref=InterPro:IPR005219,TIGRFAM:TIGR00155;Note=multi-dom~pqia_fam: integral membrane protein%2C pqia fa~conserved hypothetical protein chp00155%3B label: pqiA_fam;gbkey=misc_feature;locus_tag=GGE_0554 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77228 77546 . - . ID=id-GGE_0554-2;Note=superfamily%3B label: PqiA superfamily;gbkey=misc_feature;locus_tag=GGE_0554 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77228 77543 . - . ID=id-GGE_0554-3;Dbxref=InterPro:IPR007498,PFAM:PF04403;Note=pqia~paraquat-inducible protein a;gbkey=misc_feature;locus_tag=GGE_0554 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77123 77993 . + . ID=id-AFQR01000009.1:77123..77993;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77135 77606 . + . ID=id-AFQR01000009.1:77135..77606;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 78206 . + . ID=id-AFQR01000009.1:77144..78206;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 78125 . + . ID=id-AFQR01000009.1:77144..78125;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77999 . + . ID=id-AFQR01000009.1:77144..77999;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77855 . + . ID=id-AFQR01000009.1:77144..77855;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77585 . + . ID=id-AFQR01000009.1:77144..77585;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77489 . + . ID=id-AFQR01000009.1:77144..77489;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77387 . + . ID=id-AFQR01000009.1:77144..77387;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77144 77249 . + . ID=id-AFQR01000009.1:77144..77249;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77555 77843 . + . ID=id-AFQR01000009.1:77555..77843;Dbxref=InterPro:IPR007498,PFAM:PF04403;Note=pqia~paraquat-inducible protein a;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77558 77843 . + . ID=id-AFQR01000009.1:77558..77843;Note=superfamily%3B label: PqiA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 77769 77778 . + . ID=id-AFQR01000009.1:77769..77778;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 78505 79143 . + . ID=gene-GGE_0555;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank CDS 78505 79143 . + 0 ID=cds-EGT82724.1;Parent=gene-GGE_0555;Dbxref=InterPro:IPR016103,InterPro:IPR023529,PFAM:PF04352,NCBI_GP:EGT82724.1;Name=EGT82724.1;gbkey=CDS;gene=proQ;locus_tag=GGE_0555;product=Protein proQ;protein_id=EGT82724.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78553 79096 . + . ID=id-GGE_0555;Dbxref=InterPro:IPR023529;Note=HAMAP:MF_00749~proq~transporter prop effector%2C proq;gbkey=misc_feature;gene=proQ;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78562 78853 . + . ID=id-GGE_0555-2;Dbxref=InterPro:IPR016103;Note=superfamily:SSF48657~repressor of bacterial conjugation fino~fertility inhibition fino/proq;gbkey=misc_feature;gene=proQ;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78562 78844 . + . ID=id-GGE_0555-3;Dbxref=InterPro:IPR016103,PFAM:PF04352;Note=proq~fertility inhibition fino/proq;gbkey=misc_feature;gene=proQ;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78607 78727 . + . ID=id-GGE_0555-4;Note=superfamily%3B label: FinO_conjug_rep superfamily;gbkey=misc_feature;gene=proQ;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78619 78754 . + . ID=id-GGE_0555-5;Dbxref=InterPro:IPR016103;Note=Gene3D:1.10.1710.10~fertility inhibition fino/proq;gbkey=misc_feature;gene=proQ;locus_tag=GGE_0555 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78607 78832 . - . ID=id-AFQR01000009.1:78607..78832;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 78622 78829 . - . ID=id-AFQR01000009.1:78622..78829;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 79171 81246 . + . ID=gene-GGE_0556;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank CDS 79171 81246 . + 0 ID=cds-EGT82725.1;Parent=gene-GGE_0556;Dbxref=InterPro:IPR001478,InterPro:IPR004447,InterPro:IPR005151,InterPro:IPR020992,PFAM:PF00595,PFAM:PF03572,PFAM:PF11818,TIGRFAM:TIGR00225,NCBI_GP:EGT82725.1;Name=EGT82725.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||,serine-type peptidase activity|0008236||;go_process=proteolysis|0006508||;locus_tag=GGE_0556;product=Tail-specific protease;protein_id=EGT82725.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79195 81163 . + . ID=id-GGE_0556;Note=multi-dom%3B label: PRK11186;gbkey=misc_feature;gene=prc;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79198 79231 . + . ID=id-GGE_0556-2;Note=transmembrane_regions;gbkey=misc_feature;gene=prc;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79675 80353 . + . ID=id-GGE_0556-3;Note=superfamily:SSF52096~clpp/crotonase;gbkey=misc_feature;gene=prc;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79771 80230 . + . ID=id-GGE_0556-4;Dbxref=InterPro:IPR004447,TIGRFAM:TIGR00225;Note=prc: c-terminal processing peptidase~peptidase s41a peptidase;gbkey=misc_feature;gene=prc;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 80127 80136 . + . ID=id-GGE_0556-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=prc;locus_tag=GGE_0556 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79237 81013 . - . ID=id-AFQR01000009.1:79237..81013;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79354 79933 . - . ID=id-AFQR01000009.1:79354..79933;Dbxref=InterPro:IPR001478;Note=ProfileScan:PS50106~pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79411 79912 . - . ID=id-AFQR01000009.1:79411..79912;Dbxref=InterPro:IPR001478,PFAM:PF00595;Note=pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79417 79948 . - . ID=id-AFQR01000009.1:79417..79948;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79420 79699 . - . ID=id-AFQR01000009.1:79420..79699;Note=Gene3D:3.30.750.34;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79447 79924 . - . ID=id-AFQR01000009.1:79447..79924;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79534 79861 . - . ID=id-AFQR01000009.1:79534..79861;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79582 80773 . - . ID=id-AFQR01000009.1:79582..80773;Dbxref=InterPro:IPR020992,PFAM:PF11818;Note=duf3340~peptidase s41a peptidase-1;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79585 80773 . - . ID=id-AFQR01000009.1:79585..80773;Note=superfamily%3B label: DUF3340 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79663 80338 . - . ID=id-AFQR01000009.1:79663..80338;Note=HMMPanther:PTHR19964:SF38~carboxy-terminal processing protease~HMMPanther:PTHR19964~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79681 80254 . - . ID=id-AFQR01000009.1:79681..80254;Dbxref=InterPro:IPR005151,PFAM:PF03572;Note=peptidase_s41~peptidase s41;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79684 80257 . - . ID=id-AFQR01000009.1:79684..80257;Note=specific~superfamily%3B label: Peptidase_S41 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 79783 80194 . - . ID=id-AFQR01000009.1:79783..80194;Note=Gene3D:3.90.226.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81281 81290 . + . ID=id-AFQR01000009.1:81281..81290;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 81314 82780 . + . ID=gene-GGE_0557;Name=GGE_0557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0557 GCA_000222085.2|AFQR01000009.1 Genbank CDS 81314 82780 . + 0 ID=cds-EGT82726.1;Parent=gene-GGE_0557;Dbxref=GeneID:145639176,InterPro:IPR005490,PFAM:PF03734,NCBI_GP:EGT82726.1;Name=EGT82726.1;Note=ZP_01794783;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||;locus_tag=GGE_0557;product=putative ykuD domain-containing protein;protein_id=EGT82726.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81314 82007 . + . ID=id-GGE_0557;Note=multi-dom%3B label: COG2989;gbkey=misc_feature;locus_tag=GGE_0557 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81314 81386 . + . ID=id-GGE_0557-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0557 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81359 81758 . - . ID=id-AFQR01000009.1:81359..81758;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81359 81452 . - . ID=id-AFQR01000009.1:81359..81452;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81380 81467 . - . ID=id-AFQR01000009.1:81380..81467;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81797 82064 . - . ID=id-AFQR01000009.1:81797..82064;Note=superfamily:SSF141523~l%2Cd-transpeptidase catalytic domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81800 82079 . - . ID=id-AFQR01000009.1:81800..82079;Dbxref=InterPro:IPR005490,PFAM:PF03734;Note=ykud~ykud domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 81803 82082 . - . ID=id-AFQR01000009.1:81803..82082;Note=superfamily%3B label: YkuD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 82811 83371 . + . ID=gene-GGE_0558;Name=GGE_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank CDS 82811 83371 . + 0 ID=cds-EGT82727.1;Parent=gene-GGE_0558;Dbxref=GeneID:145631484,InterPro:IPR009045,InterPro:IPR010275,PFAM:PF05951,NCBI_GP:EGT82727.1;Name=EGT82727.1;Note=ZP_01787253;gbkey=CDS;locus_tag=GGE_0558;product=putative peptidase M15A%2C non-peptidaseue;protein_id=EGT82727.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 82811 83369 . + . ID=id-GGE_0558;Note=multi-dom%3B label: COG3108;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 82847 82880 . + . ID=id-GGE_0558-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 82907 83267 . + . ID=id-GGE_0558-3;Note=superfamily%3B label: Peptidase_M15_3 superfamily;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 82916 83258 . + . ID=id-GGE_0558-4;Dbxref=InterPro:IPR010275,PFAM:PF05951;Note=peptidase_m15_2~peptidase m15a%2C non-peptidaseue;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 82994 83186 . + . ID=id-GGE_0558-5;Dbxref=InterPro:IPR009045;Note=superfamily:SSF55166~hedgehog/dd-peptidase~hedgehog/dd-peptidase-like protein;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83003 83177 . + . ID=id-GGE_0558-6;Dbxref=InterPro:IPR009045;Note=Gene3D:3.30.1380.10~hedgehog/dd-peptidase-like protein;gbkey=misc_feature;locus_tag=GGE_0558 GCA_000222085.2|AFQR01000009.1 Genbank gene 83331 84179 . + . ID=gene-GGE_0559;Name=GGE_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank CDS 83331 84179 . + 0 ID=cds-EGT82728.1;Parent=gene-GGE_0559;Dbxref=InterPro:IPR001130,InterPro:IPR012278,InterPro:IPR015992,InterPro:IPR018228,PFAM:PF01026,PIR:PIRSF005902,NCBI_GP:EGT82728.1;Name=EGT82728.1;Note=HI_1664;Ontology_term=GO:0016888;gbkey=CDS;go_function=endodeoxyribonuclease activity producing 5'-phosphomonoesters|0016888||;locus_tag=GGE_0559;product=putative deoxyribonuclease%2C TatD-like protein;protein_id=EGT82728.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83424 84087 . + . ID=id-GGE_0559;Dbxref=InterPro:IPR012278,PIR:PIRSF005902;Note=mg-dependent dnase%2C tatd type~deoxyribonuclease%2C tatd mg-dependent;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83424 84084 . + . ID=id-GGE_0559-2;Note=Gene3D:3.20.20.140;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83430 84081 . + . ID=id-GGE_0559-3;Note=superfamily:SSF51556~metallo-dependent hydrolase;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83430 84078 . + . ID=id-GGE_0559-4;Note=specific~superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83430 84075 . + . ID=id-GGE_0559-5;Dbxref=InterPro:IPR015992;Note=HMMPanther:PTHR10060:SF3~deoxyribonuclease tatdn3~HMMPanther:PTHR10060~tatd family deoxyribonuclease~deoxyribonuclease%2C tatd;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83433 84072 . + . ID=id-GGE_0559-6;Dbxref=InterPro:IPR001130,PFAM:PF01026;Note=tatd_dnase~deoxyribonuclease%2C tatd-related;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83436 84075 . + . ID=id-GGE_0559-7;Note=multi-dom%3B label: PRK11449;gbkey=misc_feature;locus_tag=GGE_0559 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83376 83610 . - . ID=id-AFQR01000009.1:83376..83610;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83382 83988 . - . ID=id-AFQR01000009.1:83382..83988;Dbxref=InterPro:IPR018228;Note=PatternScan:PS01091~tatd_3~deoxyribonuclease%2C tatd-related%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 83387 83396 . - . ID=id-AFQR01000009.1:83387..83396;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 84189 84821 . + . ID=gene-GGE_0560;Name=GGE_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0560 GCA_000222085.2|AFQR01000009.1 Genbank CDS 84189 84821 . + 0 ID=cds-EGT82729.1;Parent=gene-GGE_0560;Dbxref=GeneID:2494857,InterPro:IPR001279,PFAM:PF00753,NCBI_GP:EGT82729.1;Name=EGT82729.1;Note=HI_1663;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||;locus_tag=GGE_0560;product=putative metallo-hydrolase/oxidoreductase;protein_id=EGT82729.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 84189 84816 . + . ID=id-GGE_0560;Note=Gene3D:3.60.15.10~superfamily:SSF56281~metallo-hydrolase/oxidoreductase;gbkey=misc_feature;locus_tag=GGE_0560 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 84189 84813 . + . ID=id-GGE_0560-2;Note=HMMPanther:PTHR11935:SF8~beta lactamase domain~HMMPanther:PTHR11935~family not named;gbkey=misc_feature;locus_tag=GGE_0560 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 84213 84744 . + . ID=id-GGE_0560-3;Note=superfamily%3B label: Lactamase_B superfamily;gbkey=misc_feature;locus_tag=GGE_0560 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 84219 84738 . + . ID=id-GGE_0560-4;Dbxref=InterPro:IPR001279,PFAM:PF00753;Note=lactamase_b~beta-lactamase-like;gbkey=misc_feature;locus_tag=GGE_0560 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 84826 84835 . + . ID=id-AFQR01000009.1:84826..84835;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 85032 87839 . + . ID=gene-GGE_0561;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank CDS 85032 87839 . + 0 ID=cds-EGT82730.1;Parent=gene-GGE_0561;Dbxref=GeneID:1171886,InterPro:IPR001017,InterPro:IPR005475,InterPro:IPR011603,PFAM:PF00676,PFAM:PF02779,PIR:PIRSF000157,TIGRFAM:TIGR00239,NCBI_GP:EGT82730.1;Name=EGT82730.1;Ontology_term=GO:0006096,GO:0008152,GO:0016624,GO:0004591,GO:0030976;gbkey=CDS;gene=sucA;go_function=oxidoreductase activity acting on the aldehyde or oxo group of donors disulfide as acceptor|0016624||,oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||,thiamine pyrophosphate binding|0030976||;go_process=glycolysis|0006096||,metabolic process|0008152||;locus_tag=GGE_0561;product=2-oxoglutarate dehydrogenase E1 component;protein_id=EGT82730.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85032 87837 . + . ID=id-GGE_0561;Dbxref=InterPro:IPR011603,PIR:PIRSF000157;Note=2-oxoglutarate dehydrogenase%2C e1 component~2-oxoglutarate dehydrogenase%2C e1 component;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85041 87828 . + . ID=id-GGE_0561-2;Note=multi-dom%3B label: sucA;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85077 87789 . + . ID=id-GGE_0561-3;Dbxref=InterPro:IPR011603,TIGRFAM:TIGR00239;Note=2oxo_dh_e1: oxoglutarate dehydrogenase (su~2-oxoglutarate dehydrogenase%2C e1 component;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85080 87792 . + . ID=id-GGE_0561-4;Dbxref=InterPro:IPR011603;Note=HMMPanther:PTHR23152~family not named~2-oxoglutarate dehydrogenase%2C e1 component;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85500 86244 . + . ID=id-GGE_0561-5;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85524 86202 . + . ID=id-GGE_0561-6;Note=Gene3D:3.40.50.970;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85683 85815 . + . ID=id-GGE_0561-7;Note=specific~superfamily%3B label: TPP_E1_OGDC_like;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85707 85911 . + . ID=id-GGE_0561-8;Dbxref=InterPro:IPR001017,PFAM:PF00676;Note=e1_dh~dehydrogenase%2C e1 component;gbkey=misc_feature;gene=sucA;locus_tag=GGE_0561 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85068 86019 . - . ID=id-AFQR01000009.1:85068..86019;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85611 86814 . - . ID=id-AFQR01000009.1:85611..86814;Note=superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85617 86814 . - . ID=id-AFQR01000009.1:85617..86814;Dbxref=InterPro:IPR005475,PFAM:PF02779;Note=transket_pyr~transketolase-like%2C pyrimidine-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85626 86829 . - . ID=id-AFQR01000009.1:85626..86829;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 85698 86802 . - . ID=id-AFQR01000009.1:85698..86802;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87837 87846 . + . ID=id-AFQR01000009.1:87837..87846;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 87961 89190 . + . ID=gene-GGE_0562;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank CDS 87961 89190 . + 0 ID=cds-EGT82731.1;Parent=gene-GGE_0562;Dbxref=GeneID:1171887,InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006255,InterPro:IPR011053,InterPro:IPR023213,PFAM:PF00198,PFAM:PF00364,PFAM:PF02817,TIGRFAM:TIGR01347,NCBI_GP:EGT82731.1;Name=EGT82731.1;Ontology_term=GO:0008152,GO:0006099,GO:0045252,GO:0008415,GO:0004149;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||;go_function=acyltransferase activity|0008415||,dihydrolipoyllysine-residue succinyltransferase activity|0004149||;go_process=metabolic process|0008152||,tricarboxylic acid cycle|0006099||;locus_tag=GGE_0562;product=Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex;protein_id=EGT82731.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87961 89188 . + . ID=id-GGE_0562;Note=multi-dom~HMMPanther:PTHR23151:SF8~dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex~HMMPanther:PTHR23151~family not named%3B label: PRK05704;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87961 88255 . + . ID=id-GGE_0562-2;Dbxref=InterPro:IPR011053;Note=superfamily:SSF51230~single hybrid motif~single hybrid motif;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87961 88240 . + . ID=id-GGE_0562-3;Note=Gene3D:2.40.50.100;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87970 89182 . + . ID=id-GGE_0562-4;Dbxref=InterPro:IPR006255,TIGRFAM:TIGR01347;Note=sucb: dihydrolipoyllysine-residue succinyltr~dihydrolipoamide succinyltransferase;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87970 88183 . + . ID=id-GGE_0562-5;Dbxref=InterPro:IPR000089;Note=specific~superfamily~ProfileScan:PS50968~biotinyl_lipoyl~biotin/lipoyl attachment%3B label: Biotinyl_lipoyl_domains superfamily;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 87973 88180 . + . ID=id-GGE_0562-6;Dbxref=InterPro:IPR000089,PFAM:PF00364;Note=biotin_lipoyl~biotin/lipoyl attachment;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88042 88051 . + . ID=id-GGE_0562-7;Dbxref=InterPro:IPR003016;Note=PatternScan:PS00189~lipoyl~2-oxo acid dehydrogenase%2C lipoyl-binding site;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88459 88687 . + . ID=id-GGE_0562-8;Note=superfamily:SSF52777~coa-dependent acyltransferases;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88492 88654 . + . ID=id-GGE_0562-9;Note=superfamily%3B label: 2-oxoacid_dh superfamily;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88498 88651 . + . ID=id-GGE_0562-10;Dbxref=InterPro:IPR023213;Note=Gene3D:3.30.559.10~chloramphenicol acetyltransferase-like domain;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88498 88648 . + . ID=id-GGE_0562-11;Dbxref=InterPro:IPR001078,PFAM:PF00198;Note=2-oxoacid_dh~2-oxoacid dehydrogenase acyltransferase%2C catalytic domain;gbkey=misc_feature;gene=sucB;locus_tag=GGE_0562 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88033 88402 . - . ID=id-AFQR01000009.1:88033..88402;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88069 88300 . - . ID=id-AFQR01000009.1:88069..88300;Dbxref=InterPro:IPR004167,PFAM:PF02817;Note=e3_binding~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88072 88300 . - . ID=id-AFQR01000009.1:88072..88300;Note=superfamily%3B label: E3_binding superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88081 88309 . - . ID=id-AFQR01000009.1:88081..88309;Dbxref=InterPro:IPR004167;Note=Gene3D:4.10.320.10~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 88114 88273 . - . ID=id-AFQR01000009.1:88114..88273;Dbxref=InterPro:IPR004167;Note=superfamily:SSF47005~peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex~e3 binding;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89274 89283 . + . ID=id-AFQR01000009.1:89274..89283;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 89306 90436 . - . ID=gene-GGE_0563;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank CDS 89306 90436 . - 0 ID=cds-EGT82732.1;Parent=gene-GGE_0563;Dbxref=GeneID:1172943,InterPro:IPR000358,InterPro:IPR009078,InterPro:IPR012348,PFAM:PF00268,NCBI_GP:EGT82732.1;Name=EGT82732.1;Ontology_term=GO:0009186,GO:0055114,GO:0016491,GO:0004748,GO:0046914;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||,ribonucleoside-diphosphate reductase activity|0004748||,transition metal ion binding|0046914||;go_process=deoxyribonucleoside diphosphate metabolic process|0009186||,oxidation-reduction process|0055114||;locus_tag=GGE_0563;product=Ribonucleoside-diphosphate reductase subunit beta;protein_id=EGT82732.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89306 90317 . - . ID=id-GGE_0563;Dbxref=InterPro:IPR000358;Note=HMMPanther:PTHR23409:SF17~subfamily not named~HMMPanther:PTHR23409~family not named~ribonucleotide reductase;gbkey=misc_feature;gene=nrdB;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89312 90326 . - . ID=id-GGE_0563-2;Dbxref=InterPro:IPR009078;Note=superfamily:SSF47240~ferritin-like~ferritin/ribonucleotide reductase-like;gbkey=misc_feature;gene=nrdB;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89315 90317 . - . ID=id-GGE_0563-3;Dbxref=InterPro:IPR012348;Note=Gene3D:1.10.620.20~ribonucleotide reductase-related;gbkey=misc_feature;gene=nrdB;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89393 90245 . - . ID=id-GGE_0563-4;Note=specific~superfamily%3B label: Ferritin_like superfamily;gbkey=misc_feature;gene=nrdB;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89393 89684 . - . ID=id-GGE_0563-5;Dbxref=InterPro:IPR000358,PFAM:PF00268;Note=ribonuc_red_sm~ribonucleotide reductase;gbkey=misc_feature;gene=nrdB;locus_tag=GGE_0563 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89357 89651 . + . ID=id-AFQR01000009.1:89357..89651;Dbxref=InterPro:IPR000358;Note=PatternScan:PS00368~ribored_small~ribonucleotide reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 89693 89906 . + . ID=id-AFQR01000009.1:89693..89906;Dbxref=InterPro:IPR000358,PFAM:PF00268;Note=ribonuc_red_sm~ribonucleotide reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 90461 90470 . + . ID=id-AFQR01000009.1:90461..90470;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 91427 93697 . - . ID=gene-GGE_0564;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank CDS 91427 93697 . - 0 ID=cds-EGT82733.1;Parent=gene-GGE_0564;Dbxref=GeneID:1172938,InterPro:IPR000788,InterPro:IPR005144,InterPro:IPR008926,InterPro:IPR013346,InterPro:IPR013509,PFAM:PF00317,PFAM:PF02867,PFAM:PF03477,TIGRFAM:TIGR02506,NCBI_GP:EGT82733.1;Name=EGT82733.1;Ontology_term=GO:0006260,GO:0055114,GO:0005971,GO:0005524,GO:0004748;gbkey=CDS;gene=nrdA;go_component=ribonucleoside-diphosphate reductase complex|0005971||;go_function=ATP binding|0005524||,ribonucleoside-diphosphate reductase activity|0004748||;go_process=DNA replication|0006260||,oxidation-reduction process|0055114||;locus_tag=GGE_0564;product=Ribonucleoside-diphosphate reductase subunit alpha;protein_id=EGT82733.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91427 93635 . - . ID=id-GGE_0564;Note=HMMPanther:PTHR11573:SF5~ribonucleoside-diphosphate reductase large chain~HMMPanther:PTHR11573~family not named;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91439 93686 . - . ID=id-GGE_0564-2;Note=multi-dom%3B label: PRK09103;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91442 91700 . - . ID=id-GGE_0564-3;Dbxref=InterPro:IPR005144;Note=ProfileScan:PS51161~atp_cone~atp-cone;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91442 91691 . - . ID=id-GGE_0564-4;Note=superfamily%3B label: ATP-cone superfamily;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91445 91688 . - . ID=id-GGE_0564-5;Dbxref=InterPro:IPR005144,PFAM:PF03477;Note=atp-cone~atp-cone;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91457 92063 . - . ID=id-GGE_0564-6;Dbxref=InterPro:IPR008926;Note=superfamily:SSF48168~r1 subunit of ribonucleotide reductase domain~ribonucleotide reductase r1 subunit;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91862 93200 . - . ID=id-GGE_0564-7;Dbxref=InterPro:IPR013346,TIGRFAM:TIGR02506;Note=nrde_nrda: ribonucleoside-diphosphate reduc~ribonucleoside-diphosphate reductase%2C alpha subunit;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91934 93125 . - . ID=id-GGE_0564-8;Note=specific~superfamily%3B label: RNR_I;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 92093 92984 . - . ID=id-GGE_0564-9;Note=superfamily:SSF51998~pfl-like glycyl radical enzyme;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 92093 92957 . - . ID=id-GGE_0564-10;Dbxref=InterPro:IPR000788,PFAM:PF02867;Note=ribonuc_red_lgc~ribonucleotide reductase large subunit;gbkey=misc_feature;gene=nrdA;locus_tag=GGE_0564 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91457 92183 . + . ID=id-AFQR01000009.1:91457..92183;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91463 92726 . + . ID=id-AFQR01000009.1:91463..92726;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91487 92321 . + . ID=id-AFQR01000009.1:91487..92321;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91496 93224 . + . ID=id-AFQR01000009.1:91496..93224;Dbxref=InterPro:IPR000788;Note=PatternScan:PS00089~ribored_large~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91496 92960 . + . ID=id-AFQR01000009.1:91496..92960;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91499 93044 . + . ID=id-AFQR01000009.1:91499..93044;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91499 92846 . + . ID=id-AFQR01000009.1:91499..92846;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91508 92831 . + . ID=id-AFQR01000009.1:91508..92831;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91511 93257 . + . ID=id-AFQR01000009.1:91511..93257;Dbxref=InterPro:IPR000788;Note=FPrintScan:PR01183~ribordtasem1~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91661 91853 . + . ID=id-AFQR01000009.1:91661..91853;Dbxref=InterPro:IPR013509,PFAM:PF00317;Note=ribonuc_red_lgn~ribonucleotide reductase large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 91703 93260 . + . ID=id-AFQR01000009.1:91703..93260;Note=Gene3D:3.20.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 92066 92075 . + . ID=id-AFQR01000009.1:92066..92075;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 93898 93907 . + . ID=id-AFQR01000009.1:93898..93907;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 93927 93936 . - . ID=id-AFQR01000009.1:93927..93936;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 93943 94524 . - . ID=gene-GGE_0565;Name=GGE_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank CDS 93943 94524 . - 0 ID=cds-EGT82734.1;Parent=gene-GGE_0565;Dbxref=InterPro:IPR007055,PFAM:PF04972,NCBI_GP:EGT82734.1;Name=EGT82734.1;Note=HI_1658;gbkey=CDS;locus_tag=GGE_0565;product=putative transport-associated protein;protein_id=EGT82734.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 93943 94009 . - . ID=id-GGE_0565;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 93973 94012 . - . ID=id-GGE_0565-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94087 94153 . - . ID=id-GGE_0565-3;Dbxref=InterPro:IPR007055;Note=ProfileScan:PS50914~bon~transport-associated;gbkey=misc_feature;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94102 94138 . - . ID=id-GGE_0565-4;Note=superfamily%3B label: BON superfamily;gbkey=misc_feature;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94108 94132 . - . ID=id-GGE_0565-5;Dbxref=InterPro:IPR007055,PFAM:PF04972;Note=bon~transport-associated;gbkey=misc_feature;locus_tag=GGE_0565 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 93973 94018 . + . ID=id-AFQR01000009.1:93973..94018;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94015 94444 . + . ID=id-AFQR01000009.1:94015..94444;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94042 94336 . + . ID=id-AFQR01000009.1:94042..94336;Note=superfamily%3B label: BON superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94117 94336 . + . ID=id-AFQR01000009.1:94117..94336;Dbxref=InterPro:IPR007055,PFAM:PF04972;Note=bon~transport-associated;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94147 94321 . + . ID=id-AFQR01000009.1:94147..94321;Dbxref=InterPro:IPR007055;Note=ProfileScan:PS50914~bon~transport-associated;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 94581 95168 . - . ID=gene-GGE_0566;Name=GGE_0566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank CDS 94581 95168 . - 0 ID=cds-EGT82735.1;Parent=gene-GGE_0566;Dbxref=GeneID:2506715,InterPro:IPR001347,PFAM:PF01380,NCBI_GP:EGT82735.1;Name=EGT82735.1;Note=HI_1657;Ontology_term=GO:0005975,GO:0005529;gbkey=CDS;go_function=sugar binding|0005529||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0566;product=putative sIS domain-containing protein;protein_id=EGT82735.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94581 95163 . - . ID=id-GGE_0566;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94590 95157 . - . ID=id-GGE_0566-2;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94650 95082 . - . ID=id-GGE_0566-3;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94686 95058 . - . ID=id-GGE_0566-4;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94854 94860 . - . ID=id-GGE_0566-5;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94911 94920 . - . ID=id-GGE_0566-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0566 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 94611 94620 . + . ID=id-AFQR01000009.1:94611..94620;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 95178 95537 . - . ID=gene-GGE_0567;Name=GGE_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank CDS 95178 95537 . - 0 ID=cds-EGT82736.1;Parent=gene-GGE_0567;Dbxref=GeneID:166232641,InterPro:IPR003509,InterPro:IPR011335,InterPro:IPR011856,PFAM:PF02021,TIGRFAM:TIGR00252,NCBI_GP:EGT82736.1;Name=EGT82736.1;Note=CGSHiEE_03775;Ontology_term=GO:0003677,GO:0004518,GO:0003676;gbkey=CDS;go_function=DNA binding|0003677||,nuclease activity|0004518||,nucleic acid binding|0003676||;locus_tag=GGE_0567;product=UPF0102 protein;protein_id=EGT82736.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95178 95535 . - . ID=id-GGE_0567;Dbxref=InterPro:IPR003509,TIGRFAM:TIGR00252;Note=superfamily~tigr00252: conserved hypothetical protein t~uncharacterised protein family upf0102%3B label: UPF0102 superfamily;gbkey=misc_feature;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95193 95523 . - . ID=id-GGE_0567-2;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95193 95517 . - . ID=id-GGE_0567-3;Dbxref=InterPro:IPR003509;Note=HAMAP:MF_00048~upf0102~uncharacterised protein family upf0102;gbkey=misc_feature;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95193 95421 . - . ID=id-GGE_0567-4;Dbxref=InterPro:IPR011856;Note=Gene3D:3.40.1350.10~endonuclease tnsa/resolvase hjc/trna endonuclease;gbkey=misc_feature;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95214 95457 . - . ID=id-GGE_0567-5;Dbxref=InterPro:IPR003509,PFAM:PF02021;Note=upf0102~uncharacterised protein family upf0102;gbkey=misc_feature;locus_tag=GGE_0567 GCA_000222085.2|AFQR01000009.1 Genbank gene 95537 97264 . - . ID=gene-GGE_0568;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=GGE_0568 GCA_000222085.2|AFQR01000009.1 Genbank CDS 95537 97264 . - 0 ID=cds-EGT82737.1;Parent=gene-GGE_0568;Dbxref=InterPro:IPR007443,PFAM:PF04348,NCBI_GP:EGT82737.1;Name=EGT82737.1;gbkey=CDS;gene=lpoA;locus_tag=GGE_0568;product=Penicillin-binding protein activator LpoA;protein_id=EGT82737.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95654 97127 . - . ID=id-GGE_0568;Dbxref=InterPro:IPR007443,PFAM:PF04348;Note=multi-dom~lppc~lppc putative lipoprotein%3B label: LppC;gbkey=misc_feature;gene=lpoA;locus_tag=GGE_0568 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 96302 96500 . - . ID=id-GGE_0568-2;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=lpoA;locus_tag=GGE_0568 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 96311 96455 . - . ID=id-GGE_0568-3;Note=specific~superfamily%3B label: PBP1_YraM_LppC_lipoprotein_like;gbkey=misc_feature;gene=lpoA;locus_tag=GGE_0568 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95576 96923 . + . ID=id-AFQR01000009.1:95576..96923;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95603 95858 . + . ID=id-AFQR01000009.1:95603..95858;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95729 97028 . + . ID=id-AFQR01000009.1:95729..97028;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95945 96620 . + . ID=id-AFQR01000009.1:95945..96620;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 95958 95967 . + . ID=id-AFQR01000009.1:95958..95967;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 97336 98187 . + . ID=gene-GGE_0569;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank CDS 97336 98187 . + 0 ID=cds-EGT82738.1;Parent=gene-GGE_0569;Dbxref=GeneID:1176815,InterPro:IPR000878,InterPro:IPR008189,InterPro:IPR014777,InterPro:IPR018063,PFAM:PF00590,TIGRFAM:TIGR00096,NCBI_GP:EGT82738.1;Name=EGT82738.1;Ontology_term=GO:0008152,GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||;go_process=metabolic process|0008152||;locus_tag=GGE_0569;product=Ribosomal RNA small subunit methyltransferase I;protein_id=EGT82738.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97336 97933 . + . ID=id-GGE_0569;Note=HMMPanther:PTHR21091:SF18~s-adenosylmethionine-dependent methytransferase~HMMPanther:PTHR21091~family not named;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97351 98173 . + . ID=id-GGE_0569-2;Note=superfamily%3B label: TP_methylase superfamily;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97351 98005 . + . ID=id-GGE_0569-3;Dbxref=InterPro:IPR000878;Note=superfamily:SSF53790~tetrapyrrole methylase~tetrapyrrole methylase;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97357 98161 . + . ID=id-GGE_0569-4;Dbxref=InterPro:IPR008189,TIGRFAM:TIGR00096;Note=tigr00096: putative s-adenosylmethionine-d~rrna small subunit methyltransferase i;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97357 98002 . + . ID=id-GGE_0569-5;Dbxref=InterPro:IPR008189;Note=HAMAP:MF_01877~16srrna_methyltr_i~rrna small subunit methyltransferase i;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97357 97666 . + . ID=id-GGE_0569-6;Dbxref=InterPro:IPR014777;Note=Gene3D:3.40.1010.10~tetrapyrrole methylase%2C subdomain 1;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97360 97933 . + . ID=id-GGE_0569-7;Dbxref=InterPro:IPR000878,PFAM:PF00590;Note=tp_methylase~tetrapyrrole methylase;gbkey=misc_feature;gene=rsmI;locus_tag=GGE_0569 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97372 97591 . - . ID=id-AFQR01000009.1:97372..97591;Dbxref=InterPro:IPR018063;Note=PatternScan:PS01296~rsmi~sam-dependent methyltransferase rsmi%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97695 97704 . - . ID=id-AFQR01000009.1:97695..97704;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 97804 97813 . - . ID=id-AFQR01000009.1:97804..97813;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 98198 98207 . - . ID=id-AFQR01000009.1:98198..98207;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 98287 99735 . + . ID=gene-GGE_0570;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=GGE_0570 GCA_000222085.2|AFQR01000009.1 Genbank CDS 98287 99735 . + 0 ID=cds-EGT82739.1;Parent=gene-GGE_0570;Dbxref=GeneID:1176217,InterPro:IPR002510,PFAM:PF01523,NCBI_GP:EGT82739.1;Name=EGT82739.1;gbkey=CDS;gene=tldD;locus_tag=GGE_0570;product=Protein tldD;protein_id=EGT82739.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 98293 99727 . + . ID=id-GGE_0570;Note=superfamily%3B label: PmbA_TldD superfamily;gbkey=misc_feature;gene=tldD;locus_tag=GGE_0570 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 98320 99700 . + . ID=id-GGE_0570-2;Note=superfamily:SSF111283~putative modulator of dna gyrase%2C pmba/tldd;gbkey=misc_feature;gene=tldD;locus_tag=GGE_0570 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 98386 99190 . + . ID=id-GGE_0570-3;Dbxref=InterPro:IPR002510,PFAM:PF01523;Note=pmba_tldd~peptidase u62%2C modulator of dna gyrase;gbkey=misc_feature;gene=tldD;locus_tag=GGE_0570 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 98323 98887 . - . ID=id-AFQR01000009.1:98323..98887;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 99452 99461 . - . ID=id-AFQR01000009.1:99452..99461;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 99857 100408 . + . ID=gene-GGE_0571;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank CDS 99857 100408 . + 0 ID=cds-EGT82740.1;Parent=gene-GGE_0571;Dbxref=InterPro:IPR000064,PFAM:PF00877,NCBI_GP:EGT82740.1;Name=EGT82740.1;gbkey=CDS;gene=nlpC;locus_tag=GGE_0571;product=Putative lipoprotein nlpC;protein_id=EGT82740.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 99857 99911 . + . ID=id-GGE_0571;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 99869 100397 . + . ID=id-GGE_0571-2;Note=multi-dom%3B label: spr;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100025 100241 . + . ID=id-GGE_0571-3;Note=superfamily:SSF54001~cysteine proteinases;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100064 100202 . + . ID=id-GGE_0571-4;Note=Gene3D:3.90.1720.10;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100076 100190 . + . ID=id-GGE_0571-5;Note=HMMPanther:PTHR21666:SF1~nlp/p60 family secreted protein~HMMPanther:PTHR21666~family not named;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100097 100163 . + . ID=id-GGE_0571-6;Dbxref=InterPro:IPR000064,PFAM:PF00877;Note=superfamily~nlpc_p60~nlp/p60%3B label: NLPC_P60 superfamily;gbkey=misc_feature;gene=nlpC;locus_tag=GGE_0571 GCA_000222085.2|AFQR01000009.1 Genbank gene 100492 101493 . - . ID=gene-GGE_0572;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank CDS 100492 101493 . - 0 ID=cds-EGT82741.1;Parent=gene-GGE_0572;Dbxref=GeneID:1169583,InterPro:IPR000146,InterPro:IPR020548,PFAM:PF00316,NCBI_GP:EGT82741.1;Name=EGT82741.1;Ontology_term=GO:0005975,GO:0042578;gbkey=CDS;gene=fbp;go_function=phosphoric ester hydrolase activity|0042578||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0572;product=Fructose-1%2C6-bisphosphatase class 1;protein_id=EGT82741.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100492 101479 . - . ID=id-GGE_0572;Note=superfamily:SSF56655~carbohydrate phosphatase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100498 101479 . - . ID=id-GGE_0572-2;Dbxref=InterPro:IPR000146;Note=HAMAP:MF_01855~fbpase_class1~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100498 101074 . - . ID=id-GGE_0572-3;Note=Gene3D:3.30.540.10;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100501 101485 . - . ID=id-GGE_0572-4;Dbxref=InterPro:IPR000146;Note=HMMPanther:PTHR11556:SF1~fructose-1%2C6-bisphosphatase~HMMPanther:PTHR11556~family not named~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100501 101476 . - . ID=id-GGE_0572-5;Dbxref=InterPro:IPR000146,PFAM:PF00316;Note=fbpase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100519 101452 . - . ID=id-GGE_0572-6;Note=specific~superfamily%3B label: FBPase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100573 100576 . - . ID=id-GGE_0572-7;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature;gene=fbp;locus_tag=GGE_0572 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100531 101302 . + . ID=id-AFQR01000009.1:100531..101302;Dbxref=InterPro:IPR020548;Note=PatternScan:PS00124~fbpase~fructose-1%2C6-bisphosphatase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100543 100735 . + . ID=id-AFQR01000009.1:100543..100735;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100564 101029 . + . ID=id-AFQR01000009.1:100564..101029;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100564 100936 . + . ID=id-AFQR01000009.1:100564..100936;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100570 101404 . + . ID=id-AFQR01000009.1:100570..101404;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100573 100684 . + . ID=id-AFQR01000009.1:100573..100684;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100576 101107 . + . ID=id-AFQR01000009.1:100576..101107;Dbxref=InterPro:IPR000146;Note=FPrintScan:PR00115~f16bphphtase~fructose-1%2C6-bisphosphatase class 1/sedoheputulose-1%2C7-bisphosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 100897 101080 . + . ID=id-AFQR01000009.1:100897..101080;Note=Gene3D:3.40.190.80;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101697 101706 . - . ID=id-AFQR01000009.1:101697..101706;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 101728 102537 . + . ID=gene-GGE_0573;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank CDS 101728 102537 . + 0 ID=cds-EGT82742.1;Parent=gene-GGE_0573;Dbxref=GeneID:81335806,InterPro:IPR001406,InterPro:IPR020094,InterPro:IPR020095,InterPro:IPR020097,InterPro:IPR020103,PFAM:PF01416,PIR:PIRSF001430,TIGRFAM:TIGR00071,NCBI_GP:EGT82742.1;Name=EGT82742.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_0573;product=tRNA pseudouridine synthase A;protein_id=EGT82742.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101728 102511 . + . ID=id-GGE_0573;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101728 102508 . + . ID=id-GGE_0573-2;Dbxref=InterPro:IPR001406,PIR:PIRSF001430;Note=trna-pseudouridine synthase a%2C prokaryotic type~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101728 102457 . + . ID=id-GGE_0573-3;Dbxref=InterPro:IPR001406;Note=multi-dom~HAMAP:MF_00171~trua~pseudouridine synthase i%2C trua%3B label: truA;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101734 102508 . + . ID=id-GGE_0573-4;Dbxref=InterPro:IPR001406;Note=HMMPanther:PTHR11142~family not named~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101734 102439 . + . ID=id-GGE_0573-5;Dbxref=InterPro:IPR001406,TIGRFAM:TIGR00071;Note=hist_trua: trna pseudouridine synthase a~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101734 102037 . + . ID=id-GGE_0573-6;Dbxref=InterPro:IPR020094;Note=Gene3D:3.30.70.580~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101743 102445 . + . ID=id-GGE_0573-7;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 101749 102019 . + . ID=id-GGE_0573-8;Dbxref=InterPro:IPR020097,PFAM:PF01416;Note=pseudou_synth_1~pseudouridine synthase i%2C trua%2C alpha/beta domain;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102046 102136 . + . ID=id-GGE_0573-9;Dbxref=InterPro:IPR020095;Note=Gene3D:3.30.70.660~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102247 102511 . + . ID=id-GGE_0573-10;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102247 102457 . + . ID=id-GGE_0573-11;Note=superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102253 102448 . + . ID=id-GGE_0573-12;Dbxref=InterPro:IPR020095;Note=Gene3D:3.30.70.660~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102265 102445 . + . ID=id-GGE_0573-13;Dbxref=InterPro:IPR020097,PFAM:PF01416;Note=pseudou_synth_1~pseudouridine synthase i%2C trua%2C alpha/beta domain;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102268 102493 . + . ID=id-GGE_0573-14;Dbxref=InterPro:IPR001406;Note=HMMPanther:PTHR11142~family not named~pseudouridine synthase i%2C trua;gbkey=misc_feature;gene=truA;locus_tag=GGE_0573 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102025 102166 . - . ID=id-AFQR01000009.1:102025..102166;Dbxref=InterPro:IPR020097,PFAM:PF01416;Note=pseudou_synth_1~pseudouridine synthase i%2C trua%2C alpha/beta domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102592 102601 . - . ID=id-AFQR01000009.1:102592..102601;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 102629 103645 . - . ID=gene-GGE_0574;Name=GGE_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0574 GCA_000222085.2|AFQR01000009.1 Genbank CDS 102629 103645 . - 0 ID=cds-EGT82743.1;Parent=gene-GGE_0574;Dbxref=GeneID:1175855,InterPro:IPR004630,InterPro:IPR018383,PFAM:PF03601,TIGRFAM:TIGR00698,NCBI_GP:EGT82743.1;Name=EGT82743.1;Note=HI_1643;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_0574;product=UPF0324 membrane protein;protein_id=EGT82743.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102641 103634 . - . ID=id-GGE_0574;Dbxref=InterPro:IPR004630,TIGRFAM:TIGR00698;Note=superfamily~tigr00698: conserved hypothetical protein~uncharacterised protein family upf0324%2C bacteria%3B label: Cons_hypoth698 superfamily;gbkey=misc_feature;locus_tag=GGE_0574 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102644 102686 . - . ID=id-GGE_0574-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0574 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102656 103553 . - . ID=id-GGE_0574-3;Dbxref=InterPro:IPR018383,PFAM:PF03601;Note=cons_hypoth698~uncharacterised protein family upf0324%2C prokaryote;gbkey=misc_feature;locus_tag=GGE_0574 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102671 102731 . + . ID=id-AFQR01000009.1:102671..102731;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102683 103295 . + . ID=id-AFQR01000009.1:102683..103295;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102689 103391 . + . ID=id-AFQR01000009.1:102689..103391;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 103565 . + . ID=id-AFQR01000009.1:102698..103565;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 103469 . + . ID=id-AFQR01000009.1:102698..103469;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 103094 . + . ID=id-AFQR01000009.1:102698..103094;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 102998 . + . ID=id-AFQR01000009.1:102698..102998;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 102911 . + . ID=id-AFQR01000009.1:102698..102911;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 102815 . + . ID=id-AFQR01000009.1:102698..102815;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 102698 102728 . + . ID=id-AFQR01000009.1:102698..102728;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103311 103320 . + . ID=id-AFQR01000009.1:103311..103320;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 103657 104466 . - . ID=gene-GGE_0575;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank CDS 103657 104466 . - 0 ID=cds-EGT82744.1;Parent=gene-GGE_0575;Dbxref=InterPro:IPR003439,PFAM:PF00005,NCBI_GP:EGT82744.1;Name=EGT82744.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=sapF;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0575;product=Peptide transport system ATP-binding protein SapF;protein_id=EGT82744.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103657 104455 . - . ID=id-GGE_0575;Note=multi-dom%3B label: SapF;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103657 104404 . - . ID=id-GGE_0575-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103663 104407 . - . ID=id-GGE_0575-3;Note=HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103663 104389 . - . ID=id-GGE_0575-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103666 104344 . - . ID=id-GGE_0575-5;Note=specific~superfamily%3B label: ABC_NikE_OppD_transporters;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103669 104395 . - . ID=id-GGE_0575-6;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103813 104029 . - . ID=id-GGE_0575-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=sapF;locus_tag=GGE_0575 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103696 104215 . + . ID=id-AFQR01000009.1:103696..104215;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 103720 104125 . + . ID=id-AFQR01000009.1:103720..104125;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 104466 105515 . - . ID=gene-GGE_0576;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank CDS 104466 105515 . - 0 ID=cds-EGT82745.1;Parent=gene-GGE_0576;Dbxref=InterPro:IPR003439,InterPro:IPR010066,InterPro:IPR013563,PFAM:PF00005,PFAM:PF08352,TIGRFAM:TIGR01727,NCBI_GP:EGT82745.1;Name=EGT82745.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0000166,GO:0015197;gbkey=CDS;gene=sapD;go_function=ATP binding|0005524||,ATPase activity|0016887||,nucleotide binding|0000166||,peptide transporter activity|0015197||;go_process=peptide transport|0015833||;locus_tag=GGE_0576;product=Peptide transport system ATP-binding protein SapD;protein_id=EGT82745.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104466 105456 . - . ID=id-GGE_0576;Note=multi-dom%3B label: SapD;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104466 105390 . - . ID=id-GGE_0576-2;Note=HMMPanther:PTHR24220:SF108~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104466 105243 . - . ID=id-GGE_0576-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104475 105240 . - . ID=id-GGE_0576-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104475 105183 . - . ID=id-GGE_0576-5;Note=specific~superfamily%3B label: ABC_NikE_OppD_transporters;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104484 105228 . - . ID=id-GGE_0576-6;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104616 104880 . - . ID=id-GGE_0576-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=sapD;locus_tag=GGE_0576 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104505 104829 . + . ID=id-AFQR01000009.1:104505..104829;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104667 105183 . + . ID=id-AFQR01000009.1:104667..105183;Dbxref=InterPro:IPR013563,PFAM:PF08352;Note=superfamily~oligo_hpy~oligopeptide/dipeptide abc transporter%3B label: oligo_HPY superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 104730 105174 . + . ID=id-AFQR01000009.1:104730..105174;Dbxref=InterPro:IPR010066,TIGRFAM:TIGR01727;Note=oligo_hpy: oligopeptide/dipeptide abc trans~oligopeptide/dipeptide abc transporter%2C atp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 105519 106406 . - . ID=gene-GGE_0577;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=GGE_0577 GCA_000222085.2|AFQR01000009.1 Genbank CDS 105519 106406 . - 0 ID=cds-EGT82746.1;Parent=gene-GGE_0577;Dbxref=InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT82746.1;Name=EGT82746.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=sapC;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0577;product=Peptide transport system permease protein sapC;protein_id=EGT82746.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105813 106062 . - . ID=id-GGE_0577;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=sapC;locus_tag=GGE_0577 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105855 106062 . - . ID=id-GGE_0577-2;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=sapC;locus_tag=GGE_0577 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105873 105969 . - . ID=id-GGE_0577-3;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=sapC;locus_tag=GGE_0577 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105555 106335 . + . ID=id-AFQR01000009.1:105555..106335;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105573 105603 . + . ID=id-AFQR01000009.1:105573..105603;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105579 105813 . + . ID=id-AFQR01000009.1:105579..105813;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 106302 . + . ID=id-AFQR01000009.1:105588..106302;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 106176 . + . ID=id-AFQR01000009.1:105588..106176;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 105984 . + . ID=id-AFQR01000009.1:105588..105984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 105906 . + . ID=id-AFQR01000009.1:105588..105906;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 105819 . + . ID=id-AFQR01000009.1:105588..105819;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 105588 105600 . + . ID=id-AFQR01000009.1:105588..105600;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106276 106285 . + . ID=id-AFQR01000009.1:106276..106285;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 106396 107361 . - . ID=gene-GGE_0578;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=GGE_0578 GCA_000222085.2|AFQR01000009.1 Genbank CDS 106396 107361 . - 0 ID=cds-EGT82747.1;Parent=gene-GGE_0578;Dbxref=InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT82747.1;Name=EGT82747.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=sapB;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0578;product=Peptide transport system permease protein sapB;protein_id=EGT82747.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106426 106453 . - . ID=id-GGE_0578;Note=seg~transmembrane_regions;gbkey=misc_feature;gene=sapB;locus_tag=GGE_0578 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106621 107083 . - . ID=id-GGE_0578-2;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=sapB;locus_tag=GGE_0578 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106621 107035 . - . ID=id-GGE_0578-3;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;gene=sapB;locus_tag=GGE_0578 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106675 107065 . - . ID=id-GGE_0578-4;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;gene=sapB;locus_tag=GGE_0578 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106432 107260 . + . ID=id-AFQR01000009.1:106432..107260;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106456 106645 . + . ID=id-AFQR01000009.1:106456..106645;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106465 107260 . + . ID=id-AFQR01000009.1:106465..107260;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106465 106939 . + . ID=id-AFQR01000009.1:106465..106939;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106465 106741 . + . ID=id-AFQR01000009.1:106465..106741;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 106465 106519 . + . ID=id-AFQR01000009.1:106465..106519;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107102 107111 . + . ID=id-AFQR01000009.1:107102..107111;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 107361 109055 . - . ID=gene-GGE_0579;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank CDS 107361 109055 . - 0 ID=cds-EGT82748.1;Parent=gene-GGE_0579;Dbxref=InterPro:IPR000914,PFAM:PF00496,NCBI_GP:EGT82748.1;Name=EGT82748.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;gene=sapA;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0579;product=Peptide transport periplasmic protein sapA;protein_id=EGT82748.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107361 108909 . - . ID=id-GGE_0579;Note=multi-dom%3B label: OppA;gbkey=misc_feature;gene=sapA;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107463 108939 . - . ID=id-GGE_0579-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=sapA;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107466 108891 . - . ID=id-GGE_0579-3;Note=specific~superfamily%3B label: PBP2_DppA_like;gbkey=misc_feature;gene=sapA;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107499 107925 . - . ID=id-GGE_0579-4;Note=Gene3D:3.90.76.10;gbkey=misc_feature;gene=sapA;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107598 108564 . - . ID=id-GGE_0579-5;Dbxref=InterPro:IPR000914,PFAM:PF00496;Note=sbp_bac_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature;gene=sapA;locus_tag=GGE_0579 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107394 108645 . + . ID=id-AFQR01000009.1:107394..108645;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107397 108912 . + . ID=id-AFQR01000009.1:107397..108912;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107430 107613 . + . ID=id-AFQR01000009.1:107430..107613;Dbxref=InterPro:IPR000914;Note=PatternScan:PS01040~sbp_bacterial_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107634 108063 . + . ID=id-AFQR01000009.1:107634..108063;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 107976 108336 . + . ID=id-AFQR01000009.1:107976..108336;Note=Gene3D:3.10.105.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 108508 108517 . + . ID=id-AFQR01000009.1:108508..108517;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 109125 110537 . + . ID=gene-GGE_0580;Name=GGE_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0580 GCA_000222085.2|AFQR01000009.1 Genbank CDS 109125 110537 . + 0 ID=cds-EGT82749.1;Parent=gene-GGE_0580;Dbxref=GeneID:1176052,InterPro:IPR007413,PFAM:PF04317,NCBI_GP:EGT82749.1;Name=EGT82749.1;Note=HI_1637;gbkey=CDS;locus_tag=GGE_0580;product=hypothetical protein;protein_id=EGT82749.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 109125 110535 . + . ID=id-GGE_0580;Note=superfamily%3B label: DUF463 superfamily;gbkey=misc_feature;locus_tag=GGE_0580 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 109188 110472 . + . ID=id-GGE_0580-2;Dbxref=InterPro:IPR007413,PFAM:PF04317;Note=duf463~protein of unknown function duf463%2C ycjx-like protein;gbkey=misc_feature;locus_tag=GGE_0580 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 109155 109551 . - . ID=id-AFQR01000009.1:109155..109551;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 109176 109185 . - . ID=id-AFQR01000009.1:109176..109185;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110422 110431 . - . ID=id-AFQR01000009.1:110422..110431;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 110575 113214 . - . ID=gene-GGE_0581;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=GGE_0581 GCA_000222085.2|AFQR01000009.1 Genbank CDS 110575 113214 . - 0 ID=cds-EGT82750.1;Parent=gene-GGE_0581;Dbxref=GeneID:1168759,InterPro:IPR015813,InterPro:IPR018129,InterPro:IPR021135,InterPro:IPR022805,PFAM:PF00311,NCBI_GP:EGT82750.1;Name=EGT82750.1;Ontology_term=GO:0015977,GO:0006099,GO:0003824,GO:0008964;gbkey=CDS;gene=ppc;go_function=catalytic activity|0003824||,phosphoenolpyruvate carboxylase activity|0008964||;go_process=carbon fixation|0015977||,tricarboxylic acid cycle|0006099||;locus_tag=GGE_0581;product=Phosphoenolpyruvate carboxylase;protein_id=EGT82750.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110575 113212 . - . ID=id-GGE_0581;Dbxref=InterPro:IPR022805;Note=superfamily~HAMAP:MF_00595~pepcase_type1~phosphoenolpyruvate carboxylase%2C bacterial/plant-type%3B label: COG1892 superfamily;gbkey=misc_feature;gene=ppc;locus_tag=GGE_0581 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110587 113203 . - . ID=id-GGE_0581-2;Dbxref=InterPro:IPR015813;Note=multi-dom~superfamily:SSF51621~phosphoenolpyruvate/pyruvate domain~pyruvate/phosphoenolpyruvate kinase%3B label: Ppc;gbkey=misc_feature;gene=ppc;locus_tag=GGE_0581 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 111859 111919 . - . ID=id-GGE_0581-3;Dbxref=InterPro:IPR021135,PFAM:PF00311;Note=pepcase~phosphoenolpyruvate carboxylase;gbkey=misc_feature;gene=ppc;locus_tag=GGE_0581 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110605 112312 . + . ID=id-AFQR01000009.1:110605..112312;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110608 110863 . + . ID=id-AFQR01000009.1:110608..110863;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110611 110977 . + . ID=id-AFQR01000009.1:110611..110977;Dbxref=InterPro:IPR018129;Note=PatternScan:PS00781~pepcase_1~phosphoenolpyruvate carboxylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110614 112183 . + . ID=id-AFQR01000009.1:110614..112183;Dbxref=InterPro:IPR018129;Note=PatternScan:PS00393~pepcase_2~phosphoenolpyruvate carboxylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110617 110974 . + . ID=id-AFQR01000009.1:110617..110974;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110623 111310 . + . ID=id-AFQR01000009.1:110623..111310;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110623 111085 . + . ID=id-AFQR01000009.1:110623..111085;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110626 111133 . + . ID=id-AFQR01000009.1:110626..111133;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110638 112177 . + . ID=id-AFQR01000009.1:110638..112177;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110638 111730 . + . ID=id-AFQR01000009.1:110638..111730;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110656 112699 . + . ID=id-AFQR01000009.1:110656..112699;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 110665 112303 . + . ID=id-AFQR01000009.1:110665..112303;Dbxref=InterPro:IPR021135;Note=FPrintScan:PR00150~pepcarbxlase~phosphoenolpyruvate carboxylase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113345 113354 . - . ID=id-AFQR01000009.1:113345..113354;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113370 113379 . + . ID=id-AFQR01000009.1:113370..113379;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 113397 114407 . - . ID=gene-GGE_0582;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank CDS 113397 114407 . - 0 ID=cds-EGT82751.1;Parent=gene-GGE_0582;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR023588,PFAM:PF00356,PFAM:PF00532,NCBI_GP:EGT82751.1;Name=EGT82751.1;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0003677,GO:0003700;gbkey=CDS;gene=purR;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_0582;product=HTH-type transcriptional repressor purR;protein_id=EGT82751.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113397 114405 . - . ID=id-GGE_0582;Dbxref=InterPro:IPR023588;Note=HAMAP:MF_01277~hth_type_purr~transcription regulator hth%2C purr;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113397 114396 . - . ID=id-GGE_0582-2;Note=multi-dom%3B label: PRK10703;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113397 113571 . - . ID=id-GGE_0582-3;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113403 113562 . - . ID=id-GGE_0582-4;Dbxref=InterPro:IPR000843;Note=ProfileScan:PS50932~hth_laci_2~transcription regulator hth%2C laci;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113403 113553 . - . ID=id-GGE_0582-5;Note=Gene3D:1.10.260.40;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113406 113535 . - . ID=id-GGE_0582-6;Dbxref=InterPro:IPR000843,PFAM:PF00356;Note=laci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113406 113430 . - . ID=id-GGE_0582-7;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113409 113454 . - . ID=id-GGE_0582-8;Dbxref=InterPro:IPR000843;Note=PatternScan:PS00356~hth_laci_1~transcription regulator hth%2C laci;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113412 113550 . - . ID=id-GGE_0582-9;Note=specific~superfamily%3B label: HTH_LacI;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113559 113757 . - . ID=id-GGE_0582-10;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113574 114183 . - . ID=id-GGE_0582-11;Dbxref=InterPro:IPR001761,PFAM:PF00532;Note=peripla_bp_1~periplasmic binding protein/laci transcriptional regulator;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113577 114219 . - . ID=id-GGE_0582-12;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113580 114210 . - . ID=id-GGE_0582-13;Note=specific~superfamily%3B label: PBP1_PurR;gbkey=misc_feature;gene=purR;locus_tag=GGE_0582 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113430 113784 . + . ID=id-AFQR01000009.1:113430..113784;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113430 113436 . + . ID=id-AFQR01000009.1:113430..113436;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 113811 113919 . + . ID=id-AFQR01000009.1:113811..113919;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114538 114559 . - . ID=id-AFQR01000009.1:114538..114559;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114669 114678 . + . ID=id-AFQR01000009.1:114669..114678;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 114691 115590 . + . ID=gene-GGE_0583;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank CDS 114691 115590 . + 0 ID=cds-EGT82752.1;Parent=gene-GGE_0583;Dbxref=InterPro:IPR005664,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR023180,TIGRFAM:TIGR00965,NCBI_GP:EGT82752.1;Name=EGT82752.1;Ontology_term=GO:0009089,GO:0005737,GO:0008666,GO:0016740;gbkey=CDS;gene=dapD;go_component=cytoplasm|0005737||;go_function=2 3 4 5-tetrahydropyridine-2 6-dicarboxylate N-succinyltransferase activity|0008666||,transferase activity|0016740||;go_process=lysine biosynthetic process via diaminopimelate|0009089||;locus_tag=GGE_0583;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=EGT82752.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114724 115534 . + . ID=id-GGE_0583;Note=HMMPanther:PTHR19136:SF52~2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate n-succinyltransferase~HMMPanther:PTHR19136~family not named;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114766 115507 . + . ID=id-GGE_0583-2;Dbxref=InterPro:IPR005664;Note=HAMAP:MF_00811~dapd~2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate n-succinyltransferase;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114766 115504 . + . ID=id-GGE_0583-3;Note=multi-dom%3B label: dapD;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114766 115459 . + . ID=id-GGE_0583-4;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114766 114901 . + . ID=id-GGE_0583-5;Dbxref=InterPro:IPR023180;Note=Gene3D:1.10.166.10~tetrahydrodipicolinate-n-succinyltransferase%2C chain a%2C domain 1;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114772 115504 . + . ID=id-GGE_0583-6;Dbxref=InterPro:IPR005664,TIGRFAM:TIGR00965;Note=dapd: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarbo~2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate n-succinyltransferase;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115051 115219 . + . ID=id-GGE_0583-7;Note=Gene3D:2.160.10.10;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115069 115105 . + . ID=id-GGE_0583-8;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature;gene=dapD;locus_tag=GGE_0583 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114730 114781 . - . ID=id-AFQR01000009.1:114730..114781;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 114778 115165 . - . ID=id-AFQR01000009.1:114778..115165;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115608 115617 . - . ID=id-AFQR01000009.1:115608..115617;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115619 115628 . + . ID=id-AFQR01000009.1:115619..115628;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 115646 116944 . - . ID=gene-GGE_0584;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank CDS 115646 116944 . - 0 ID=cds-EGT82753.1;Parent=gene-GGE_0584;Dbxref=GeneID:81335795,InterPro:IPR001114,InterPro:IPR018220,PFAM:PF00709,TIGRFAM:TIGR00184,NCBI_GP:EGT82753.1;Name=EGT82753.1;Ontology_term=GO:0006164,GO:0005737,GO:0005525,GO:0004019,GO:0000287;gbkey=CDS;gene=purA;go_component=cytoplasm|0005737||;go_function=GTP binding|0005525||,adenylosuccinate synthase activity|0004019||,magnesium ion binding|0000287||;go_process=purine nucleotide biosynthetic process|0006164||;locus_tag=GGE_0584;product=Adenylosuccinate synthetase;protein_id=EGT82753.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115646 116942 . - . ID=id-GGE_0584;Dbxref=InterPro:IPR001114;Note=HAMAP:MF_00011~adenylosucc_synth~adenylosuccinate synthetase;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115646 116933 . - . ID=id-GGE_0584-2;Dbxref=InterPro:IPR001114;Note=HMMPanther:PTHR11846~family not named~adenylosuccinate synthetase;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115646 116924 . - . ID=id-GGE_0584-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115652 116939 . - . ID=id-GGE_0584-4;Note=multi-dom%3B label: PRK01117;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115658 116891 . - . ID=id-GGE_0584-5;Note=specific~superfamily%3B label: AdSS;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115661 116906 . - . ID=id-GGE_0584-6;Dbxref=InterPro:IPR001114,PFAM:PF00709;Note=adenylsucc_synt~adenylosuccinate synthetase;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115664 116924 . - . ID=id-GGE_0584-7;Dbxref=InterPro:IPR001114,TIGRFAM:TIGR00184;Note=pura: adenylosuccinate synthetase~adenylosuccinate synthetase;gbkey=misc_feature;gene=purA;locus_tag=GGE_0584 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115670 115679 . + . ID=id-AFQR01000009.1:115670..115679;Dbxref=InterPro:IPR018220;Note=PatternScan:PS01266~adenylosuccin_syn_1~adenylosuccinate synthase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115682 116045 . + . ID=id-AFQR01000009.1:115682..116045;Dbxref=InterPro:IPR018220;Note=PatternScan:PS00513~adenylosuccin_syn_2~adenylosuccinate synthase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115862 116231 . + . ID=id-AFQR01000009.1:115862..116231;Note=Gene3D:3.40.440.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 115922 115955 . + . ID=id-AFQR01000009.1:115922..115955;Note=Gene3D:1.10.300.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 116126 116447 . + . ID=id-AFQR01000009.1:116126..116447;Note=Gene3D:3.90.170.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117012 117045 . + . ID=id-AFQR01000009.1:117012..117045;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117033 117042 . + . ID=id-AFQR01000009.1:117033..117042;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 117277 117561 . - . ID=gene-GGE_0585;Name=GGE_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0585 GCA_000222085.2|AFQR01000009.1 Genbank CDS 117277 117561 . - 0 ID=cds-EGT82754.1;Parent=gene-GGE_0585;Dbxref=InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019759,PFAM:PF00717,NCBI_GP:EGT82754.1;Name=EGT82754.1;Note=Hypothetical peptidase S24/S26A/S26B;gbkey=CDS;locus_tag=GGE_0585;product=putative peptidase S24/S26A/S26B;protein_id=EGT82754.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117319 117514 . - . ID=id-GGE_0585;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;locus_tag=GGE_0585 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117322 117487 . - . ID=id-GGE_0585-2;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature;locus_tag=GGE_0585 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117325 117511 . - . ID=id-GGE_0585-3;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature;locus_tag=GGE_0585 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117325 117451 . - . ID=id-GGE_0585-4;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature;locus_tag=GGE_0585 GCA_000222085.2|AFQR01000009.1 Genbank gene 117575 118123 . - . ID=gene-GGE_0586;Name=GGE_0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0586 GCA_000222085.2|AFQR01000009.1 Genbank CDS 117575 118123 . - 0 ID=cds-EGT82755.1;Parent=gene-GGE_0586;Dbxref=GeneID:170718803,InterPro:IPR010744,PFAM:PF07022,NCBI_GP:EGT82755.1;Name=EGT82755.1;Note=YP_001783984;Ontology_term=GO:0016481,GO:0003677,GO:0016564;gbkey=CDS;go_function=DNA binding|0003677||,transcription repressor activity|0016564||;go_process=negative regulation of transcription|0016481||;locus_tag=GGE_0586;product=putative bacteriophage CI repressor;protein_id=EGT82755.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117608 117767 . - . ID=id-GGE_0586;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_0586 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 117611 117764 . - . ID=id-GGE_0586-2;Dbxref=InterPro:IPR010744,PFAM:PF07022;Note=phage_ci_repr~bacteriophage ci repressor;gbkey=misc_feature;locus_tag=GGE_0586 GCA_000222085.2|AFQR01000009.1 Genbank gene 118245 118433 . + . ID=gene-GGE_0587;Name=GGE_0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0587 GCA_000222085.2|AFQR01000009.1 Genbank CDS 118245 118433 . + 0 ID=cds-EGT82756.1;Parent=gene-GGE_0587;Dbxref=GeneID:296314022,NCBI_GP:EGT82756.1;Name=EGT82756.1;Note=ZP_06863963;gbkey=CDS;locus_tag=GGE_0587;product=putative phage-related DNA-binding protein;protein_id=EGT82756.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118254 118422 . + . ID=id-GGE_0587;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0587 GCA_000222085.2|AFQR01000009.1 Genbank gene 118442 118555 . + . ID=gene-GGE_0588;Name=GGE_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0588 GCA_000222085.2|AFQR01000009.1 Genbank CDS 118442 118555 . + 0 ID=cds-EGT82757.1;Parent=gene-GGE_0588;Dbxref=InterPro:IPR011991,NCBI_GP:EGT82757.1;Name=EGT82757.1;Note=Hypothetical winged helix-turn-helix transcription repressor DNA-binding;gbkey=CDS;locus_tag=GGE_0588;product=putative winged helix-turn-helix transcription repressor DNA-binding protein;protein_id=EGT82757.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118457 118541 . + . ID=id-GGE_0588;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0588 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118643 118652 . + . ID=id-AFQR01000009.1:118643..118652;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 118652 120430 . + . ID=gene-GGE_0589;Name=GGE_0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank CDS 118652 120430 . + 0 ID=cds-EGT82758.1;Parent=gene-GGE_0589;Dbxref=GeneID:145633899,InterPro:IPR004189,InterPro:IPR009004,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,InterPro:IPR015126,InterPro:IPR015378,PFAM:PF02914,PFAM:PF09039,PFAM:PF09299,NCBI_GP:EGT82758.1;Name=EGT82758.1;Note=ZP_01789620;Ontology_term=GO:0015074,GO:0045449,GO:0006313,GO:0003677,GO:0003676,GO:0005515,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,nucleic acid binding|0003676||,protein binding|0005515||,transposase activity|0004803||;go_process=DNA integration|0015074||,regulation of transcription|0045449||,transposition DNA-mediated|0006313||;locus_tag=GGE_0589;product=transposase;protein_id=EGT82758.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118670 118952 . + . ID=id-GGE_0589;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118691 118925 . + . ID=id-GGE_0589-2;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118892 118976 . + . ID=id-GGE_0589-3;Dbxref=InterPro:IPR015126,PFAM:PF09039;Note=superfamily~mu_i-gamma~mu dna binding%2C i gamma subdomain%3B label: Mu_I-gamma superfamily;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 119192 119366 . + . ID=id-GGE_0589-4;Note=Gene3D:3.30.420.10;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 119216 119303 . + . ID=id-GGE_0589-5;Dbxref=InterPro:IPR004189,PFAM:PF02914;Note=superfamily~mu_transposase~transposase%2C bacteriophage mu-type%3B label: rve superfamily;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 119219 119321 . + . ID=id-GGE_0589-6;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 119240 119297 . + . ID=id-GGE_0589-7;Note=BlastProDom:PD223702~q8edt9_sheon_q8edt9;gbkey=misc_feature;locus_tag=GGE_0589 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118697 120266 . - . ID=id-AFQR01000009.1:118697..120266;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118700 120173 . - . ID=id-AFQR01000009.1:118700..120173;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118853 119924 . - . ID=id-AFQR01000009.1:118853..119924;Dbxref=InterPro:IPR009004;Note=Gene3D:2.30.30.130~transposase%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118871 119900 . - . ID=id-AFQR01000009.1:118871..119900;Dbxref=InterPro:IPR015378,PFAM:PF09299;Note=superfamily~mu-transpos_c~transposase-like%2C mu%3B label: Mu-transpos_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118871 118970 . - . ID=id-AFQR01000009.1:118871..118970;Dbxref=InterPro:IPR012287;Note=Gene3D:1.10.10.60~homeodomain-related;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118880 118961 . - . ID=id-AFQR01000009.1:118880..118961;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 118892 119888 . - . ID=id-AFQR01000009.1:118892..119888;Dbxref=InterPro:IPR015378;Note=superfamily:SSF50610~mu transposase domain~transposase-like%2C mu;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 120682 121020 . - . ID=gene-GGE_0590;Name=GGE_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0590 GCA_000222085.2|AFQR01000009.1 Genbank CDS 120682 121020 . - 0 ID=cds-EGT82759.1;Parent=gene-GGE_0590;Dbxref=GeneID:219870509,InterPro:IPR021874,PFAM:PF11985,NCBI_GP:EGT82759.1;Name=EGT82759.1;Note=YP_002474884;gbkey=CDS;locus_tag=GGE_0590;product=bacteriophage Mu GP27-like protein;protein_id=EGT82759.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 120691 120823 . - . ID=id-GGE_0590;Note=superfamily%3B label: DUF3486 superfamily;gbkey=misc_feature;locus_tag=GGE_0590 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 120694 120838 . - . ID=id-GGE_0590-2;Dbxref=InterPro:IPR021874,PFAM:PF11985;Note=duf3486~protein of unknown function duf3486;gbkey=misc_feature;locus_tag=GGE_0590 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 120724 120919 . + . ID=id-AFQR01000009.1:120724..120919;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 120769 120928 . + . ID=id-AFQR01000009.1:120769..120928;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 121119 122090 . - . ID=gene-GGE_0591;Name=GGE_0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0591 GCA_000222085.2|AFQR01000009.1 Genbank CDS 121119 122090 . - 0 ID=cds-EGT82760.1;Parent=gene-GGE_0591;Dbxref=GeneID:219870508,NCBI_GP:EGT82760.1;Name=EGT82760.1;Note=YP_002474883~HAPS_0246;gbkey=CDS;locus_tag=GGE_0591;product=Hypothetical protein;protein_id=EGT82760.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 121128 121185 . - . ID=id-GGE_0591;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0591 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 121413 121587 . - . ID=id-GGE_0591-2;Note=multi-dom%3B label: V_ATPase_I;gbkey=misc_feature;locus_tag=GGE_0591 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 121149 121260 . + . ID=id-AFQR01000009.1:121149..121260;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 121281 121551 . + . ID=id-AFQR01000009.1:121281..121551;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 122135 122144 . + . ID=id-AFQR01000009.1:122135..122144;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 122157 122381 . - . ID=gene-GGE_0592;Name=GGE_0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0592 GCA_000222085.2|AFQR01000009.1 Genbank CDS 122157 122381 . - 0 ID=cds-EGT82761.1;Parent=gene-GGE_0592;Dbxref=GeneID:219870507,NCBI_GP:EGT82761.1;Name=EGT82761.1;Note=YP_002474882~HAPS_0245;gbkey=CDS;locus_tag=GGE_0592;product=Hypothetical protein;protein_id=EGT82761.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 122223 122316 . + . ID=id-AFQR01000009.1:122223..122316;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 122384 123037 . - . ID=gene-GGE_0593;Name=GGE_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0593 GCA_000222085.2|AFQR01000009.1 Genbank CDS 122384 123037 . - 0 ID=cds-EGT82762.1;Parent=gene-GGE_0593;Dbxref=GeneID:219870506,NCBI_GP:EGT82762.1;Name=EGT82762.1;Note=YP_002474881~HAPS_0244;gbkey=CDS;locus_tag=GGE_0593;product=Hypothetical protein;protein_id=EGT82762.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 122471 122954 . + . ID=id-AFQR01000009.1:122471..122954;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 123813 124136 . + . ID=gene-GGE_0594;Name=GGE_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0594 GCA_000222085.2|AFQR01000009.1 Genbank CDS 123813 124136 . + 0 ID=cds-EGT82763.1;Parent=gene-GGE_0594;Dbxref=InterPro:IPR009057,InterPro:IPR014875,PFAM:PF08765,NCBI_GP:EGT82763.1;Name=EGT82763.1;Note=Hypothetical mor transcription activator;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||;locus_tag=GGE_0594;product=putative mor transcription activator;protein_id=EGT82763.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 123840 124104 . + . ID=id-GGE_0594;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_0594 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 123936 123999 . + . ID=id-GGE_0594-2;Dbxref=InterPro:IPR014875,PFAM:PF08765;Note=mor~mor transcription activator;gbkey=misc_feature;locus_tag=GGE_0594 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 123957 123972 . + . ID=id-GGE_0594-3;Note=superfamily%3B label: Mor superfamily;gbkey=misc_feature;locus_tag=GGE_0594 GCA_000222085.2|AFQR01000009.1 Genbank gene 124123 125001 . + . ID=gene-GGE_0595;Name=GGE_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0595 GCA_000222085.2|AFQR01000009.1 Genbank CDS 124123 125001 . + 0 ID=cds-EGT82764.1;Parent=gene-GGE_0595;Dbxref=GeneID:240948070,NCBI_GP:EGT82764.1;Name=EGT82764.1;Note=ZP_04752480;gbkey=CDS;locus_tag=GGE_0595;product=putative bacteriophage protein;protein_id=EGT82764.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 124210 124558 . - . ID=id-AFQR01000009.1:124210..124558;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 125005 125937 . + . ID=gene-GGE_0596;Name=GGE_0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0596 GCA_000222085.2|AFQR01000009.1 Genbank CDS 125005 125937 . + 0 ID=cds-EGT82765.1;Parent=gene-GGE_0596;Dbxref=GeneID:219870504,NCBI_GP:EGT82765.1;Name=EGT82765.1;Note=YP_002474879;gbkey=CDS;locus_tag=GGE_0596;product=putative bacteriophage protein;protein_id=EGT82765.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 125005 125932 . + . ID=id-GGE_0596;Note=Gene3D:3.90.1690.10;gbkey=misc_feature;locus_tag=GGE_0596 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 126607 126616 . + . ID=id-AFQR01000009.1:126607..126616;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 126714 126723 . - . ID=id-AFQR01000009.1:126714..126723;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 126979 127629 . + . ID=gene-GGE_0597;Name=GGE_0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank CDS 126979 127629 . + 0 ID=cds-EGT82766.1;Parent=gene-GGE_0597;Dbxref=GeneID:325578553,InterPro:IPR001450,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00037,NCBI_GP:EGT82766.1;Name=EGT82766.1;Note=ZP_08148653;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_0597;product=hydrogenase-4 component A;protein_id=EGT82766.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127021 127558 . + . ID=id-GGE_0597;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127033 127576 . + . ID=id-GGE_0597-2;Note=multi-dom%3B label: PRK12769;gbkey=misc_feature;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127033 127555 . + . ID=id-GGE_0597-3;Note=HMMPanther:PTHR11938:SF73~formate hydrogenlyase subunit 2~HMMPanther:PTHR11938~family not named;gbkey=misc_feature;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127036 127078 . + . ID=id-GGE_0597-4;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127054 127147 . + . ID=id-GGE_0597-5;Note=Gene3D:3.30.70.20;gbkey=misc_feature;locus_tag=GGE_0597 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127015 127276 . - . ID=id-AFQR01000009.1:127015..127276;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127048 127258 . - . ID=id-AFQR01000009.1:127048..127258;Dbxref=InterPro:IPR001450,PFAM:PF00037;Note=fer4~4fe-4s binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127051 127255 . - . ID=id-AFQR01000009.1:127051..127255;Note=superfamily%3B label: Fer4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127054 127222 . - . ID=id-AFQR01000009.1:127054..127222;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127069 127249 . - . ID=id-AFQR01000009.1:127069..127249;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127126 127450 . - . ID=id-AFQR01000009.1:127126..127450;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 127672 129693 . + . ID=gene-GGE_0598;Name=GGE_0598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank CDS 127672 129693 . + 0 ID=cds-EGT82767.1;Parent=gene-GGE_0598;Dbxref=GeneID:251792884,InterPro:IPR001750,InterPro:IPR003918,PFAM:PF00361,NCBI_GP:EGT82767.1;Name=EGT82767.1;Note=YP_003007610;Ontology_term=GO:0042773,GO:0055114,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||;go_process=ATP synthesis coupled electron transport|0042773||,oxidation-reduction process|0055114||;locus_tag=GGE_0598;product=hydrogenase-4 subunit B;protein_id=EGT82767.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127672 129691 . + . ID=id-GGE_0598;Note=HMMPanther:PTHR22773:SF13~formate dehydrogenlyase subunit 3 (hydrogenase-3%2C subunit c)~HMMPanther:PTHR22773~family not named;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127678 127711 . + . ID=id-GGE_0598-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127684 127741 . + . ID=id-GGE_0598-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127717 129604 . + . ID=id-GGE_0598-4;Note=multi-dom%3B label: PRK06521;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 128068 128518 . + . ID=id-GGE_0598-5;Note=superfamily%3B label: Oxidored_q1 superfamily;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 128068 128506 . + . ID=id-GGE_0598-6;Dbxref=InterPro:IPR001750,PFAM:PF00361;Note=oxidored_q1~nadh ubiquinone/plastoquinone oxidoreductase;gbkey=misc_feature;locus_tag=GGE_0598 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127702 128680 . - . ID=id-AFQR01000009.1:127702..128680;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127711 129652 . - . ID=id-AFQR01000009.1:127711..129652;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127714 128377 . - . ID=id-AFQR01000009.1:127714..128377;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127717 128605 . - . ID=id-AFQR01000009.1:127717..128605;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127720 128419 . - . ID=id-AFQR01000009.1:127720..128419;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127732 129628 . - . ID=id-AFQR01000009.1:127732..129628;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127732 128077 . - . ID=id-AFQR01000009.1:127732..128077;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 129259 . - . ID=id-AFQR01000009.1:127741..129259;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 129091 . - . ID=id-AFQR01000009.1:127741..129091;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128962 . - . ID=id-AFQR01000009.1:127741..128962;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128818 . - . ID=id-AFQR01000009.1:127741..128818;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128689 . - . ID=id-AFQR01000009.1:127741..128689;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128578 . - . ID=id-AFQR01000009.1:127741..128578;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128491 . - . ID=id-AFQR01000009.1:127741..128491;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128386 . - . ID=id-AFQR01000009.1:127741..128386;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128281 . - . ID=id-AFQR01000009.1:127741..128281;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 128170 . - . ID=id-AFQR01000009.1:127741..128170;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 127996 . - . ID=id-AFQR01000009.1:127741..127996;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 127915 . - . ID=id-AFQR01000009.1:127741..127915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127741 127789 . - . ID=id-AFQR01000009.1:127741..127789;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127747 128383 . - . ID=id-AFQR01000009.1:127747..128383;Dbxref=InterPro:IPR003918;Note=FPrintScan:PR01437~nuoxdrdtase4~nadh ubiquinone oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127747 128176 . - . ID=id-AFQR01000009.1:127747..128176;Dbxref=InterPro:IPR003918;Note=FPrintScan:PR01437~nuoxdrdtase4~nadh ubiquinone oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127753 128836 . - . ID=id-AFQR01000009.1:127753..128836;Dbxref=InterPro:IPR003918;Note=FPrintScan:PR01437~nuoxdrdtase4~nadh ubiquinone oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 127956 127965 . - . ID=id-AFQR01000009.1:127956..127965;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129177 129186 . - . ID=id-AFQR01000009.1:129177..129186;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 129703 130665 . + . ID=gene-GGE_0599;Name=GGE_0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank CDS 129703 130665 . + 0 ID=cds-EGT82768.1;Parent=gene-GGE_0599;Dbxref=GeneID:325578551,InterPro:IPR001694,InterPro:IPR018086,PFAM:PF00146,NCBI_GP:EGT82768.1;Name=EGT82768.1;Note=ZP_08148651;Ontology_term=GO:0055114,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0599;product=hydrogenase-4 component C;protein_id=EGT82768.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129703 130663 . + . ID=id-GGE_0599;Dbxref=InterPro:IPR001694;Note=HMMPanther:PTHR11432~family not named~nadh ubiquinone oxidoreductase%2C subunit 1/f420h2 oxidoreductase subunit h;gbkey=misc_feature;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129748 129772 . + . ID=id-GGE_0599-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129751 129751 . + . ID=id-GGE_0599-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129757 130540 . + . ID=id-GGE_0599-4;Dbxref=InterPro:IPR001694,PFAM:PF00146;Note=nadhdh~nadh ubiquinone oxidoreductase%2C subunit 1/f420h2 oxidoreductase subunit h;gbkey=misc_feature;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129799 130564 . + . ID=id-GGE_0599-5;Note=superfamily%3B label: NADHdh superfamily;gbkey=misc_feature;locus_tag=GGE_0599 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129745 130321 . - . ID=id-AFQR01000009.1:129745..130321;Dbxref=InterPro:IPR018086;Note=PatternScan:PS00668~complex1_nd1_2~nadh ubiquinone oxidoreductase%2C subunit 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129751 130258 . - . ID=id-AFQR01000009.1:129751..130258;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129751 129853 . - . ID=id-AFQR01000009.1:129751..129853;Dbxref=InterPro:IPR018086;Note=PatternScan:PS00667~complex1_nd1_1~nadh ubiquinone oxidoreductase%2C subunit 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129763 130246 . - . ID=id-AFQR01000009.1:129763..130246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 130594 . - . ID=id-AFQR01000009.1:129772..130594;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 130489 . - . ID=id-AFQR01000009.1:129772..130489;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 130408 . - . ID=id-AFQR01000009.1:129772..130408;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 130135 . - . ID=id-AFQR01000009.1:129772..130135;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 130030 . - . ID=id-AFQR01000009.1:129772..130030;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 129772 129919 . - . ID=id-AFQR01000009.1:129772..129919;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130221 130230 . - . ID=id-AFQR01000009.1:130221..130230;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 130675 132120 . + . ID=gene-GGE_0600;Name=GGE_0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank CDS 130675 132120 . + 0 ID=cds-EGT82769.1;Parent=gene-GGE_0600;Dbxref=GeneID:301156412,InterPro:IPR001750,PFAM:PF00361,NCBI_GP:EGT82769.1;Name=EGT82769.1;Note=CBW15883;Ontology_term=GO:0042773,GO:0055114,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||;go_process=ATP synthesis coupled electron transport|0042773||,oxidation-reduction process|0055114||;locus_tag=GGE_0600;product=hydrogenase 4%2C membrane subunit;protein_id=EGT82769.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130675 132103 . + . ID=id-GGE_0600;Note=HMMPanther:PTHR22773:SF39~nadh dehydrogenase subunit 5~HMMPanther:PTHR22773~family not named;gbkey=misc_feature;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130681 132106 . + . ID=id-GGE_0600-2;Note=multi-dom%3B label: PRK06525;gbkey=misc_feature;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130687 130732 . + . ID=id-GGE_0600-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 131068 131485 . + . ID=id-GGE_0600-4;Note=superfamily%3B label: Oxidored_q1 superfamily;gbkey=misc_feature;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 131071 131479 . + . ID=id-GGE_0600-5;Dbxref=InterPro:IPR001750,PFAM:PF00361;Note=oxidored_q1~nadh ubiquinone/plastoquinone oxidoreductase;gbkey=misc_feature;locus_tag=GGE_0600 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130699 131209 . - . ID=id-AFQR01000009.1:130699..131209;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130711 131614 . - . ID=id-AFQR01000009.1:130711..131614;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130714 131593 . - . ID=id-AFQR01000009.1:130714..131593;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130720 131134 . - . ID=id-AFQR01000009.1:130720..131134;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130723 130765 . - . ID=id-AFQR01000009.1:130723..130765;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130738 130999 . - . ID=id-AFQR01000009.1:130738..130999;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130741 131320 . - . ID=id-AFQR01000009.1:130741..131320;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130741 131137 . - . ID=id-AFQR01000009.1:130741..131137;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 132046 . - . ID=id-AFQR01000009.1:130744..132046;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131902 . - . ID=id-AFQR01000009.1:130744..131902;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131776 . - . ID=id-AFQR01000009.1:130744..131776;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131647 . - . ID=id-AFQR01000009.1:130744..131647;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131569 . - . ID=id-AFQR01000009.1:130744..131569;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131482 . - . ID=id-AFQR01000009.1:130744..131482;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131296 . - . ID=id-AFQR01000009.1:130744..131296;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131167 . - . ID=id-AFQR01000009.1:130744..131167;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 131017 . - . ID=id-AFQR01000009.1:130744..131017;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 130888 . - . ID=id-AFQR01000009.1:130744..130888;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130744 130762 . - . ID=id-AFQR01000009.1:130744..130762;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130753 130897 . - . ID=id-AFQR01000009.1:130753..130897;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 130756 131386 . - . ID=id-AFQR01000009.1:130756..131386;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 132131 132769 . + . ID=gene-GGE_0601;Name=GGE_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0601 GCA_000222085.2|AFQR01000009.1 Genbank CDS 132131 132769 . + 0 ID=cds-EGT82770.1;Parent=gene-GGE_0601;Dbxref=GeneID:261868401,InterPro:IPR001133,PFAM:PF00420,NCBI_GP:EGT82770.1;Name=EGT82770.1;Note=YP_003256323;Ontology_term=GO:0042773,GO:0055114,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity acting on NADH or NADPH|0016651||;go_process=ATP synthesis coupled electron transport|0042773||,oxidation-reduction process|0055114||;locus_tag=GGE_0601;product=hydrogenase 4 membrane subunit;protein_id=EGT82770.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132131 132767 . + . ID=id-GGE_0601;Note=superfamily%3B label: HyfE superfamily;gbkey=misc_feature;locus_tag=GGE_0601 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132143 132185 . + . ID=id-GGE_0601-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0601 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132161 132683 . + . ID=id-GGE_0601-3;Note=BlastProDom:PD037531~q6d7t2_erwct_q6d7t2;gbkey=misc_feature;locus_tag=GGE_0601 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132161 132239 . - . ID=id-AFQR01000009.1:132161..132239;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132173 132599 . - . ID=id-AFQR01000009.1:132173..132599;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132200 132644 . - . ID=id-AFQR01000009.1:132200..132644;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132200 132401 . - . ID=id-AFQR01000009.1:132200..132401;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132200 132296 . - . ID=id-AFQR01000009.1:132200..132296;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132200 132215 . - . ID=id-AFQR01000009.1:132200..132215;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132392 132506 . - . ID=id-AFQR01000009.1:132392..132506;Dbxref=InterPro:IPR001133,PFAM:PF00420;Note=oxidored_q2~nadh-ubiquinone oxidoreductase chain 4l/k;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132716 132725 . - . ID=id-AFQR01000009.1:132716..132725;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 132774 134312 . + . ID=gene-GGE_0602;Name=GGE_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank CDS 132774 134312 . + 0 ID=cds-EGT82771.1;Parent=gene-GGE_0602;Dbxref=GeneID:325578548,InterPro:IPR001750,PFAM:PF00361,NCBI_GP:EGT82771.1;Name=EGT82771.1;Note=ZP_08148648;Ontology_term=GO:0042773,GO:0055114,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||;go_process=ATP synthesis coupled electron transport|0042773||,oxidation-reduction process|0055114||;locus_tag=GGE_0602;product=hydrogenase-4 component F;protein_id=EGT82771.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132774 134244 . + . ID=id-GGE_0602;Note=HMMPanther:PTHR22773:SF56~subfamily not named~HMMPanther:PTHR22773~family not named;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132786 132834 . + . ID=id-GGE_0602-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132792 132810 . + . ID=id-GGE_0602-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132834 134193 . + . ID=id-GGE_0602-4;Note=multi-dom%3B label: PRK06458;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 133164 133608 . + . ID=id-GGE_0602-5;Dbxref=InterPro:IPR001750,PFAM:PF00361;Note=oxidored_q1~nadh ubiquinone/plastoquinone oxidoreductase;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 133164 133578 . + . ID=id-GGE_0602-6;Note=superfamily%3B label: Oxidored_q1 superfamily;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134226 134235 . + . ID=id-GGE_0602-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0602 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132804 133971 . - . ID=id-AFQR01000009.1:132804..133971;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132807 134151 . - . ID=id-AFQR01000009.1:132807..134151;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132813 133917 . - . ID=id-AFQR01000009.1:132813..133917;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132813 133728 . - . ID=id-AFQR01000009.1:132813..133728;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132834 134001 . - . ID=id-AFQR01000009.1:132834..134001;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132840 133449 . - . ID=id-AFQR01000009.1:132840..133449;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 134151 . - . ID=id-AFQR01000009.1:132843..134151;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 134022 . - . ID=id-AFQR01000009.1:132843..134022;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133890 . - . ID=id-AFQR01000009.1:132843..133890;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133734 . - . ID=id-AFQR01000009.1:132843..133734;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133629 . - . ID=id-AFQR01000009.1:132843..133629;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133524 . - . ID=id-AFQR01000009.1:132843..133524;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133413 . - . ID=id-AFQR01000009.1:132843..133413;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133260 . - . ID=id-AFQR01000009.1:132843..133260;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 133119 . - . ID=id-AFQR01000009.1:132843..133119;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 132990 . - . ID=id-AFQR01000009.1:132843..132990;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132843 132864 . - . ID=id-AFQR01000009.1:132843..132864;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132852 132984 . - . ID=id-AFQR01000009.1:132852..132984;Note=FPrintScan:PR01434~nadhdhgnase5;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 132855 134028 . - . ID=id-AFQR01000009.1:132855..134028;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 134332 136062 . + . ID=gene-GGE_0603;Name=GGE_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank CDS 134332 136062 . + 0 ID=cds-EGT82772.1;Parent=gene-GGE_0603;Dbxref=GeneID:301156409,InterPro:IPR001135,InterPro:IPR001268,InterPro:IPR001501,InterPro:IPR014029,PFAM:PF00329,PFAM:PF00346,PFAM:PF00374,NCBI_GP:EGT82772.1;Name=EGT82772.1;Note=CBW15880;Ontology_term=GO:0055114,GO:0051287,GO:0008137,GO:0008901,GO:0016151,GO:0016651,GO:0048038;gbkey=CDS;go_function=NAD or NADH binding|0051287||,NADH dehydrogenase (ubiquinone) activity|0008137||,ferredoxin hydrogenase activity|0008901||,nickel ion binding|0016151||,oxidoreductase activity acting on NADH or NADPH|0016651||,quinone binding|0048038||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0603;product=formate hydrogenlyase subunit 5;protein_id=EGT82772.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134377 134815 . + . ID=id-GGE_0603;Note=superfamily%3B label: Complex1_30kDa superfamily;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134383 134887 . + . ID=id-GGE_0603-2;Note=superfamily:SSF143243~nqo5-like;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134389 135958 . + . ID=id-GGE_0603-3;Note=HMMPanther:PTHR11993:SF16~subfamily not named~HMMPanther:PTHR11993~family not named;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134392 135883 . + . ID=id-GGE_0603-4;Note=multi-dom%3B label: PRK11742;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134494 134650 . + . ID=id-GGE_0603-5;Dbxref=InterPro:IPR001268,PFAM:PF00329;Note=complex1_30kda~nadh ubiquinone oxidoreductase%2C 30kda subunit;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134875 135415 . + . ID=id-GGE_0603-6;Note=superfamily%3B label: Complex1_49kDa superfamily;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134890 135406 . + . ID=id-GGE_0603-7;Note=Gene3D:1.10.645.10;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134920 135379 . + . ID=id-GGE_0603-8;Note=superfamily:SSF56762~hydb/nqo4-like;gbkey=misc_feature;locus_tag=GGE_0603 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134368 135001 . - . ID=id-AFQR01000009.1:134368..135001;Dbxref=InterPro:IPR014029;Note=PatternScan:PS00535~complex1_49k~nadh ubiquinone oxidoreductase%2C 49kda subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134371 135958 . - . ID=id-AFQR01000009.1:134371..135958;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134371 135196 . - . ID=id-AFQR01000009.1:134371..135196;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134383 134758 . - . ID=id-AFQR01000009.1:134383..134758;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134398 135358 . - . ID=id-AFQR01000009.1:134398..135358;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134470 134620 . - . ID=id-AFQR01000009.1:134470..134620;Dbxref=InterPro:IPR001268;Note=BlastProDom:PD001581~q6d7t4_erwct_q6d7t4~nadh ubiquinone oxidoreductase%2C 30kda subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134533 135766 . - . ID=id-AFQR01000009.1:134533..135766;Dbxref=InterPro:IPR001135,PFAM:PF00346;Note=complex1_49kda~nadh-quinone oxidoreductase%2C subunit d;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134539 135007 . - . ID=id-AFQR01000009.1:134539..135007;Dbxref=InterPro:IPR001501,PFAM:PF00374;Note=nifese_hases~nickel-dependent hydrogenase%2C large subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 134839 135247 . - . ID=id-AFQR01000009.1:134839..135247;Dbxref=InterPro:IPR001135,PFAM:PF00346;Note=complex1_49kda~nadh-quinone oxidoreductase%2C subunit d;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 136073 136648 . + . ID=gene-GGE_0604;Name=GGE_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0604 GCA_000222085.2|AFQR01000009.1 Genbank CDS 136073 136648 . + 0 ID=cds-EGT82773.1;Parent=gene-GGE_0604;Dbxref=GeneID:261868404,InterPro:IPR001450,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00037,NCBI_GP:EGT82773.1;Name=EGT82773.1;Note=YP_003256326;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||;locus_tag=GGE_0604;product=hydrogenase-4 subunit H;protein_id=EGT82773.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136073 136571 . + . ID=id-GGE_0604;Note=multi-dom%3B label: PRK08222;gbkey=misc_feature;locus_tag=GGE_0604 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136115 136523 . + . ID=id-GGE_0604-2;Note=HMMPanther:PTHR10849:SF4~nadh dehydrogenase [ubiquinone] iron-sulfur protein 8%2C mitochondrial~HMMPanther:PTHR10849~nadh dehydrogenase [ubiquinone] iron-sulfur protein 8%2C mitochondrial;gbkey=misc_feature;locus_tag=GGE_0604 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136127 136376 . + . ID=id-GGE_0604-3;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_0604 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136163 136235 . + . ID=id-GGE_0604-4;Note=Gene3D:3.30.70.20;gbkey=misc_feature;locus_tag=GGE_0604 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136109 136298 . - . ID=id-AFQR01000009.1:136109..136298;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136109 136193 . - . ID=id-AFQR01000009.1:136109..136193;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136127 136295 . - . ID=id-AFQR01000009.1:136127..136295;Dbxref=InterPro:IPR001450,PFAM:PF00037;Note=superfamily~fer4~4fe-4s binding domain%3B label: Fer4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136163 136271 . - . ID=id-AFQR01000009.1:136163..136271;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136163 136166 . - . ID=id-AFQR01000009.1:136163..136166;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136190 136325 . - . ID=id-AFQR01000009.1:136190..136325;Note=Gene3D:3.30.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 136645 137421 . + . ID=gene-GGE_0605;Name=GGE_0605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank CDS 136645 137421 . + 0 ID=cds-EGT82774.1;Parent=gene-GGE_0605;Dbxref=GeneID:261868405,InterPro:IPR006137,InterPro:IPR014406,PFAM:PF01058,NCBI_GP:EGT82774.1;Name=EGT82774.1;Note=YP_003256327;Ontology_term=GO:0055114,GO:0051539,GO:0008137,GO:0016651,GO:0048038;gbkey=CDS;go_function=4 iron 4 sulfur cluster binding|0051539||,NADH dehydrogenase (ubiquinone) activity|0008137||,oxidoreductase activity acting on NADH or NADPH|0016651||,quinone binding|0048038||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0605;product=hydrogenase-4 subunit I;protein_id=EGT82774.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136675 137305 . + . ID=id-GGE_0605;Dbxref=InterPro:IPR014406;Note=HMMPanther:PTHR11995:SF3~formate hydrogenlyase 7~HMMPanther:PTHR11995~family not named~[nife]-hydrogenase-3-type complex%2C small subunit/nadh quinone oxidoreductase%2C subunit nuob;gbkey=misc_feature;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136732 137035 . + . ID=id-GGE_0605-2;Note=superfamily%3B label: Oxidored_q6 superfamily;gbkey=misc_feature;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136750 137080 . + . ID=id-GGE_0605-3;Note=superfamily:SSF56770~hyda/nqo6-like;gbkey=misc_feature;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136750 137020 . + . ID=id-GGE_0605-4;Dbxref=InterPro:IPR006137;Note=Gene3D:3.40.50.700~nadh ubiquinone oxidoreductase-like%2C 20kda subunit;gbkey=misc_feature;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136786 136975 . + . ID=id-GGE_0605-5;Dbxref=InterPro:IPR006137,PFAM:PF01058;Note=oxidored_q6~nadh ubiquinone oxidoreductase-like%2C 20kda subunit;gbkey=misc_feature;locus_tag=GGE_0605 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136681 137122 . - . ID=id-AFQR01000009.1:136681..137122;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 136687 137209 . - . ID=id-AFQR01000009.1:136687..137209;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 137899 138306 . + . ID=gene-GGE_0606;Name=GGE_0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0606 GCA_000222085.2|AFQR01000009.1 Genbank CDS 137899 138306 . + 0 ID=cds-EGT82775.1;Parent=gene-GGE_0606;Dbxref=GeneID:325578544,InterPro:IPR010005,PFAM:PF07450,NCBI_GP:EGT82775.1;Name=EGT82775.1;Note=ZP_08148644;gbkey=CDS;locus_tag=GGE_0606;product=formate hydrogenlyase maturation protein HycH;protein_id=EGT82775.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 137899 138298 . + . ID=id-GGE_0606;Note=superfamily%3B label: HycH superfamily;gbkey=misc_feature;locus_tag=GGE_0606 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 137899 138295 . + . ID=id-GGE_0606-2;Dbxref=InterPro:IPR010005;Note=BlastProDom:PD021295~q34g37_rhopa_q34g37~formate hydrogenlyase maturation hych;gbkey=misc_feature;locus_tag=GGE_0606 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 137911 138286 . + . ID=id-GGE_0606-3;Dbxref=InterPro:IPR010005,PFAM:PF07450;Note=hych~formate hydrogenlyase maturation hych;gbkey=misc_feature;locus_tag=GGE_0606 GCA_000222085.2|AFQR01000009.1 Genbank gene 138299 138757 . + . ID=gene-GGE_0607;Name=GGE_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank CDS 138299 138757 . + 0 ID=cds-EGT82776.1;Parent=gene-GGE_0607;Dbxref=GeneID:261868407,InterPro:IPR000671,InterPro:IPR004420,InterPro:IPR023430,PFAM:PF01750,TIGRFAM:TIGR00072,TIGRFAM:TIGR00142,NCBI_GP:EGT82776.1;Name=EGT82776.1;Note=YP_003256329;Ontology_term=GO:0008047,GO:0008233;gbkey=CDS;go_function=enzyme activator activity|0008047||,peptidase activity|0008233||;locus_tag=GGE_0607;product=hydrogenase 3 maturation protease;protein_id=EGT82776.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138305 138731 . + . ID=id-GGE_0607;Note=superfamily:SSF53163~hybd-like;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138308 138713 . + . ID=id-GGE_0607-2;Note=multi-dom%3B label: frhD;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138311 138731 . + . ID=id-GGE_0607-3;Dbxref=InterPro:IPR004420,TIGRFAM:TIGR00142;Note=hyci: hydrogenase maturation peptidase hy~peptidase a31%2C hydrogenase maturation protease hyci;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138311 138716 . + . ID=id-GGE_0607-4;Dbxref=InterPro:IPR023430;Note=Gene3D:3.40.50.1450~peptidase hybd-like domain;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138311 138338 . + . ID=id-GGE_0607-5;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138314 138719 . + . ID=id-GGE_0607-6;Dbxref=InterPro:IPR000671,TIGRFAM:TIGR00072;Note=hydrog_prot: hydrogenase maturation prote~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138314 138707 . + . ID=id-GGE_0607-7;Note=specific~superfamily%3B label: H2MP superfamily;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138392 138620 . + . ID=id-GGE_0607-8;Dbxref=InterPro:IPR000671,PFAM:PF01750;Note=hyci~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138686 138695 . + . ID=id-GGE_0607-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0607 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138332 138470 . - . ID=id-AFQR01000009.1:138332..138470;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138335 138347 . - . ID=id-AFQR01000009.1:138335..138347;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138350 138503 . - . ID=id-AFQR01000009.1:138350..138503;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138353 138401 . - . ID=id-AFQR01000009.1:138353..138401;Dbxref=InterPro:IPR000671;Note=FPrintScan:PR00446~hydrgnuptake~peptidase a31%2C hydrogen uptake protein;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 138844 141114 . - . ID=gene-GGE_0608;Name=GGE_0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank CDS 138844 141114 . - 0 ID=cds-EGT82777.1;Parent=gene-GGE_0608;Dbxref=GeneID:315634610,InterPro:IPR001792,InterPro:IPR004421,InterPro:IPR006070,InterPro:IPR011125,InterPro:IPR017945,InterPro:IPR017968,PFAM:PF00708,PFAM:PF01300,PFAM:PF07503,PIR:PIRSF006256,TIGRFAM:TIGR00143,NCBI_GP:EGT82777.1;Name=EGT82777.1;Note=ZP_07889894;Ontology_term=GO:0046944,GO:0016743,GO:0046872,GO:0008270;gbkey=CDS;go_function=carboxyl- or carbamoyltransferase activity|0016743||,metal ion binding|0046872||,zinc ion binding|0008270||;go_process=protein carbamoylation|0046944||;locus_tag=GGE_0608;product=hydrogenase maturation protein HypF;protein_id=EGT82777.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138844 141112 . - . ID=id-GGE_0608;Dbxref=InterPro:IPR004421,PIR:PIRSF006256;Note=carbamoyltransferase%2C hypf type~carbamoyltransferase%2C hypf-type;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138844 141100 . - . ID=id-GGE_0608-2;Note=HMMPanther:PTHR10029:SF4~hydrogenase maturation protein~HMMPanther:PTHR10029~acylphosphatase;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138844 139123 . - . ID=id-GGE_0608-3;Dbxref=InterPro:IPR001792;Note=superfamily:SSF54975~acylphosphatase/bluf domain-like~acylphosphatase-like;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138853 139117 . - . ID=id-GGE_0608-4;Dbxref=InterPro:IPR001792;Note=ProfileScan:PS51160~acylphosphatase_3~acylphosphatase-like;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138853 139114 . - . ID=id-GGE_0608-5;Note=Gene3D:3.30.70.100;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138853 139111 . - . ID=id-GGE_0608-6;Dbxref=InterPro:IPR001792,PFAM:PF00708;Note=acylphosphatase~acylphosphatase-like;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138856 139111 . - . ID=id-GGE_0608-7;Note=superfamily%3B label: Acylphosphatase superfamily;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138859 141091 . - . ID=id-GGE_0608-8;Note=multi-dom%3B label: HypF;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138862 141085 . - . ID=id-GGE_0608-9;Dbxref=InterPro:IPR004421,TIGRFAM:TIGR00143;Note=hypf: carbamoyltransferase hypf~carbamoyltransferase%2C hypf-type;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138868 138877 . - . ID=id-GGE_0608-10;Dbxref=InterPro:IPR017968;Note=PatternScan:PS00150~acylphosphatase_1~acylphosphatase%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 139372 139489 . - . ID=id-GGE_0608-11;Dbxref=InterPro:IPR017945;Note=superfamily:SSF55821~yrdc/ribb~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 140086 140095 . - . ID=id-GGE_0608-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0608 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138892 140449 . + . ID=id-AFQR01000009.1:138892..140449;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138946 139324 . + . ID=id-AFQR01000009.1:138946..139324;Dbxref=InterPro:IPR011125,PFAM:PF07503;Note=superfamily~zf-hypf~zinc finger%2C hypf-type%3B label: zf-HYPF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 138949 139171 . + . ID=id-AFQR01000009.1:138949..139171;Dbxref=InterPro:IPR011125,PFAM:PF07503;Note=superfamily~zf-hypf~zinc finger%2C hypf-type%3B label: zf-HYPF superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 139360 139477 . + . ID=id-AFQR01000009.1:139360..139477;Dbxref=InterPro:IPR006070,PFAM:PF01300;Note=superfamily~sua5_ycio_yrdc~sua5/ycio/yrdc%3B label: Sua5_yciO_yrdC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 139360 139447 . + . ID=id-AFQR01000009.1:139360..139447;Dbxref=InterPro:IPR017945;Note=Gene3D:3.90.870.10~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 139393 139450 . + . ID=id-AFQR01000009.1:139393..139450;Dbxref=InterPro:IPR006070;Note=ProfileScan:PS51163~yrdc~sua5/ycio/yrdc;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 140483 140492 . + . ID=id-AFQR01000009.1:140483..140492;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 140856 140865 . + . ID=id-AFQR01000009.1:140856..140865;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 141214 141957 . - . ID=gene-GGE_0609;Name=GGE_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0609 GCA_000222085.2|AFQR01000009.1 Genbank CDS 141214 141957 . - 0 ID=cds-EGT82778.1;Parent=gene-GGE_0609;Dbxref=InterPro:IPR003848,InterPro:IPR014729,PFAM:PF02698,NCBI_GP:EGT82778.1;Name=EGT82778.1;Note=HI_1701;gbkey=CDS;locus_tag=GGE_0609;product=putative rossmann-like alpha/beta/alpha sandwich fold-containing protein;protein_id=EGT82778.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 141244 141283 . - . ID=id-GGE_0609;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0609 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 141427 141622 . - . ID=id-GGE_0609-2;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;locus_tag=GGE_0609 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 141445 141706 . - . ID=id-GGE_0609-3;Dbxref=InterPro:IPR003848,PFAM:PF02698;Note=duf218~domain of unknown function duf218;gbkey=misc_feature;locus_tag=GGE_0609 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 141448 141703 . - . ID=id-GGE_0609-4;Note=specific~superfamily%3B label: YdcF-like;gbkey=misc_feature;locus_tag=GGE_0609 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 141283 141331 . + . ID=id-AFQR01000009.1:141283..141331;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142074 142083 . + . ID=id-AFQR01000009.1:142074..142083;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 142092 143297 . + . ID=gene-GGE_0610;Name=GGE_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0610 GCA_000222085.2|AFQR01000009.1 Genbank CDS 142092 143297 . + 0 ID=cds-EGT82779.1;Parent=gene-GGE_0610;Dbxref=GeneID:14285535,InterPro:IPR002797,PFAM:PF01943,NCBI_GP:EGT82779.1;Name=EGT82779.1;Note=HI_1700;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=polysaccharide biosynthetic process|0000271||;locus_tag=GGE_0610;product=Lsg locus putative protein 1;protein_id=EGT82779.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142107 142881 . + . ID=id-GGE_0610;Dbxref=InterPro:IPR002797,PFAM:PF01943;Note=polysacc_synt~polysaccharide biosynthesis protein;gbkey=misc_feature;locus_tag=GGE_0610 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142107 142875 . + . ID=id-GGE_0610-2;Note=superfamily%3B label: Polysacc_synt superfamily;gbkey=misc_feature;locus_tag=GGE_0610 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142113 142161 . + . ID=id-GGE_0610-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0610 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142146 142938 . - . ID=id-AFQR01000009.1:142146..142938;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142146 142584 . - . ID=id-AFQR01000009.1:142146..142584;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142146 142398 . - . ID=id-AFQR01000009.1:142146..142398;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142146 142209 . - . ID=id-AFQR01000009.1:142146..142209;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142152 143214 . - . ID=id-AFQR01000009.1:142152..143214;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142152 142692 . - . ID=id-AFQR01000009.1:142152..142692;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142161 143136 . - . ID=id-AFQR01000009.1:142161..143136;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142161 143049 . - . ID=id-AFQR01000009.1:142161..143049;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142161 142809 . - . ID=id-AFQR01000009.1:142161..142809;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142161 142488 . - . ID=id-AFQR01000009.1:142161..142488;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 142161 142320 . - . ID=id-AFQR01000009.1:142161..142320;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 143294 143755 . + . ID=gene-GGE_0611;Name=GGE_0611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0611 GCA_000222085.2|AFQR01000009.1 Genbank CDS 143294 143755 . + 0 ID=cds-EGT82780.1;Parent=gene-GGE_0611;Dbxref=GeneID:145637639,InterPro:IPR012477,PFAM:PF07922,NCBI_GP:EGT82780.1;Name=EGT82780.1;Note=ZP_01793294;gbkey=CDS;locus_tag=GGE_0611;product=CMP-N-acetylneuraminate-beta-galactosamide-alpha-2%2C 3-sialyltransferase;protein_id=EGT82780.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 143366 143684 . + . ID=id-GGE_0611;Note=superfamily%3B label: Glyco_transf_52 superfamily;gbkey=misc_feature;locus_tag=GGE_0611 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 143366 143681 . + . ID=id-GGE_0611-2;Dbxref=InterPro:IPR012477,PFAM:PF07922;Note=glyco_transf_52~glycosyltransferase family 52;gbkey=misc_feature;locus_tag=GGE_0611 GCA_000222085.2|AFQR01000009.1 Genbank gene 143881 144207 . + . ID=gene-GGE_0612;Name=GGE_0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0612 GCA_000222085.2|AFQR01000009.1 Genbank CDS 143881 144207 . + 0 ID=cds-EGT82781.1;Parent=gene-GGE_0612;Dbxref=InterPro:IPR012477,PFAM:PF07922,NCBI_GP:EGT82781.1;Name=EGT82781.1;Note=Hypothetical glycosyltransferase family 52;gbkey=CDS;locus_tag=GGE_0612;product=putative glycosyltransferase family 52;protein_id=EGT82781.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 143881 144142 . + . ID=id-GGE_0612;Note=superfamily%3B label: Glyco_transf_52 superfamily;gbkey=misc_feature;locus_tag=GGE_0612 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 143881 144139 . + . ID=id-GGE_0612-2;Dbxref=InterPro:IPR012477,PFAM:PF07922;Note=glyco_transf_52~glycosyltransferase family 52;gbkey=misc_feature;locus_tag=GGE_0612 GCA_000222085.2|AFQR01000009.1 Genbank gene 144209 145270 . + . ID=gene-GGE_0613;Name=GGE_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0613 GCA_000222085.2|AFQR01000009.1 Genbank CDS 144209 145270 . + 0 ID=cds-EGT82782.1;Parent=gene-GGE_0613;Dbxref=InterPro:IPR001296,PFAM:PF00534,NCBI_GP:EGT82782.1;Name=EGT82782.1;Note=HI_1698;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||;locus_tag=GGE_0613;product=putative glycosyl transferase%2C group 1;protein_id=EGT82782.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 144209 145268 . + . ID=id-GGE_0613;Note=multi-dom%3B label: RfaG;gbkey=misc_feature;locus_tag=GGE_0613 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 144218 145262 . + . ID=id-GGE_0613-2;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase~HMMPanther:PTHR12526~family not named;gbkey=misc_feature;locus_tag=GGE_0613 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 144218 145256 . + . ID=id-GGE_0613-3;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;locus_tag=GGE_0613 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 144677 144746 . - . ID=id-AFQR01000009.1:144677..144746;Dbxref=InterPro:IPR001296,PFAM:PF00534;Note=glycos_transf_1~glycosyl transferase%2C group 1;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 145252 146055 . + . ID=gene-GGE_0614;Name=GGE_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0614 GCA_000222085.2|AFQR01000009.1 Genbank CDS 145252 146055 . + 0 ID=cds-EGT82783.1;Parent=gene-GGE_0614;Dbxref=GeneID:7387855,InterPro:IPR002654,PFAM:PF01755,NCBI_GP:EGT82783.1;Name=EGT82783.1;Note=HI_1697;Ontology_term=GO:0009103;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||;locus_tag=GGE_0614;product=Lsg locus putative protein 4;protein_id=EGT82783.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 145285 145840 . + . ID=id-GGE_0614;Dbxref=InterPro:IPR002654,PFAM:PF01755;Note=glyco_transf_25~glycosyl transferase%2C family 25;gbkey=misc_feature;locus_tag=GGE_0614 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 145291 145555 . + . ID=id-GGE_0614-2;Note=specific~superfamily%3B label: Glyco_transf_25;gbkey=misc_feature;locus_tag=GGE_0614 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 145423 145456 . - . ID=id-AFQR01000009.1:145423..145456;Note=HMMPanther:PTHR10730:SF2~glycosyltransferase 25 family member~HMMPanther:PTHR10730~procollagen-lysine%2C2-oxoglutarate 5-dioxygenase/glycosyltransferase 25 family member;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 145605 145614 . - . ID=id-AFQR01000009.1:145605..145614;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 146067 146948 . + . ID=gene-GGE_0615;Name=GGE_0615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank CDS 146067 146948 . + 0 ID=cds-EGT82784.1;Parent=gene-GGE_0615;Dbxref=GeneID:12643769,InterPro:IPR001173,PFAM:PF00535,NCBI_GP:EGT82784.1;Name=EGT82784.1;Note=HI_1696;gbkey=CDS;locus_tag=GGE_0615;product=putative glycosyl transferase%2C family 2;protein_id=EGT82784.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146067 146892 . + . ID=id-GGE_0615;Note=multi-dom%3B label: COG1216;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146067 146745 . + . ID=id-GGE_0615-2;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146073 146763 . + . ID=id-GGE_0615-3;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146073 146685 . + . ID=id-GGE_0615-4;Note=HMMPanther:PTHR22916~family not named;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146076 146532 . + . ID=id-GGE_0615-5;Dbxref=InterPro:IPR001173,PFAM:PF00535;Note=glycos_transf_2~glycosyl transferase%2C family 2;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146079 146604 . + . ID=id-GGE_0615-6;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type;gbkey=misc_feature;locus_tag=GGE_0615 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146097 146301 . - . ID=id-AFQR01000009.1:146097..146301;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 146958 147761 . + . ID=gene-GGE_0616;Name=GGE_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank CDS 146958 147761 . + 0 ID=cds-EGT82785.1;Parent=gene-GGE_0616;Dbxref=InterPro:IPR001173,PFAM:PF00535,NCBI_GP:EGT82785.1;Name=EGT82785.1;Note=HI_1695;gbkey=CDS;locus_tag=GGE_0616;product=putative glycosyl transferase%2C family 2;protein_id=EGT82785.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146958 147759 . + . ID=id-GGE_0616;Note=multi-dom%3B label: COG1216;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146958 147750 . + . ID=id-GGE_0616-2;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146958 147732 . + . ID=id-GGE_0616-3;Note=HMMPanther:PTHR22916~family not named;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146958 147636 . + . ID=id-GGE_0616-4;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146970 147558 . + . ID=id-GGE_0616-5;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 146970 147420 . + . ID=id-GGE_0616-6;Dbxref=InterPro:IPR001173,PFAM:PF00535;Note=glycos_transf_2~glycosyl transferase%2C family 2;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 147444 147453 . + . ID=id-GGE_0616-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0616 GCA_000222085.2|AFQR01000009.1 Genbank gene 147858 148865 . + . ID=gene-GGE_0617;Name=GGE_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0617 GCA_000222085.2|AFQR01000009.1 Genbank CDS 147858 148865 . + 0 ID=cds-EGT82786.1;Parent=gene-GGE_0617;Dbxref=GeneID:325578523,InterPro:IPR011970,InterPro:IPR023346,TIGRFAM:TIGR02283,NCBI_GP:EGT82786.1;Name=EGT82786.1;Note=ZP_08148623;gbkey=CDS;locus_tag=GGE_0617;product=lytic transglycosylase;protein_id=EGT82786.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 147894 148830 . + . ID=id-GGE_0617;Dbxref=InterPro:IPR023346;Note=superfamily:SSF53955~lysozyme-like~lysozyme-like domain;gbkey=misc_feature;locus_tag=GGE_0617 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 147897 148812 . + . ID=id-GGE_0617-2;Note=superfamily%3B label: lysozyme_like superfamily;gbkey=misc_feature;locus_tag=GGE_0617 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 147903 148809 . + . ID=id-GGE_0617-3;Dbxref=InterPro:IPR011970,TIGRFAM:TIGR02283;Note=mltb_2: lytic murein transglycosylase~lytic murein transglycosylase;gbkey=misc_feature;locus_tag=GGE_0617 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 147903 148806 . + . ID=id-GGE_0617-4;Note=multi-dom%3B label: MltB_2;gbkey=misc_feature;locus_tag=GGE_0617 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 148230 148482 . - . ID=id-AFQR01000009.1:148230..148482;Note=Gene3D:1.10.530.10;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 148954 150096 . + . ID=gene-GGE_0618;Name=GGE_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0618 GCA_000222085.2|AFQR01000009.1 Genbank CDS 148954 150096 . + 0 ID=cds-EGT82787.1;Parent=gene-GGE_0618;Dbxref=GeneID:149242189,InterPro:IPR021574,PFAM:PF11477,NCBI_GP:EGT82787.1;Name=EGT82787.1;Note=2ILV_A;gbkey=CDS;locus_tag=GGE_0618;product=putative sialyltransferase-like protein;protein_id=EGT82787.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 148960 150091 . + . ID=id-GGE_0618;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;locus_tag=GGE_0618 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 148966 150064 . + . ID=id-GGE_0618-2;Dbxref=InterPro:IPR021574,PFAM:PF11477;Note=superfamily~pm0188~sialyltransferase pmo188%3B label: PM0188 superfamily;gbkey=misc_feature;locus_tag=GGE_0618 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 150253 150472 . - . ID=id-AFQR01000009.1:150253..150472;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 150253 150391 . - . ID=id-AFQR01000009.1:150253..150391;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 150253 150289 . - . ID=id-AFQR01000009.1:150253..150289;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000009.1 Genbank gene 151433 151921 . - . ID=gene-GGE_0619;Name=GGE_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0619 GCA_000222085.2|AFQR01000009.1 Genbank CDS 151433 151921 . - 0 ID=cds-EGT82788.1;Parent=gene-GGE_0619;Dbxref=InterPro:IPR001296,PFAM:PF00534,NCBI_GP:EGT82788.1;Name=EGT82788.1;Note=Hypothetical glycosyl transferase%2C group 1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||;locus_tag=GGE_0619;product=putative glycosyl transferase%2C group 1;protein_id=EGT82788.1;transl_table=11 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 151433 151898 . - . ID=id-GGE_0619;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase~HMMPanther:PTHR12526~family not named;gbkey=misc_feature;locus_tag=GGE_0619 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 151433 151892 . - . ID=id-GGE_0619-2;Note=superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;locus_tag=GGE_0619 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 151454 151814 . - . ID=id-GGE_0619-3;Dbxref=InterPro:IPR001296,PFAM:PF00534;Note=glycos_transf_1~glycosyl transferase%2C group 1;gbkey=misc_feature;locus_tag=GGE_0619 GCA_000222085.2|AFQR01000009.1 Genbank sequence_feature 151478 151538 . + . ID=id-AFQR01000009.1:151478..151538;Note=seg;gbkey=misc_feature ##sequence-region AFQR01000008.1 1 48906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000008.1 Genbank region 1 48906 . + . ID=AFQR01000008.1:1..48906;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000008.1 Genbank gene 227 2419 . + . ID=gene-GGE_0443;Name=GGE_0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0443 GCA_000222085.2|AFQR01000008.1 Genbank CDS 227 2419 . + 0 ID=cds-EGT82795.1;Parent=gene-GGE_0443;Dbxref=GeneID:319896971,InterPro:IPR009270,PFAM:PF06048,NCBI_GP:EGT82795.1;Name=EGT82795.1;Note=YP_004135166;gbkey=CDS;locus_tag=GGE_0443;product=Hypothetical protein;protein_id=EGT82795.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 347 356 . + . ID=id-GGE_0443;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0443 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 704 1901 . + . ID=id-GGE_0443-2;Note=superfamily%3B label: DUF927 superfamily;gbkey=misc_feature;locus_tag=GGE_0443 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 1817 1826 . + . ID=id-GGE_0443-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0443 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 269 2378 . - . ID=id-AFQR01000008.1:269..2378;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 863 941 . - . ID=id-AFQR01000008.1:863..941;Dbxref=InterPro:IPR009270,PFAM:PF06048;Note=duf927~protein of unknown function duf927;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 3084 3638 . + . ID=gene-GGE_0444;Name=GGE_0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0444 GCA_000222085.2|AFQR01000008.1 Genbank CDS 3084 3638 . + 0 ID=cds-EGT82796.1;Parent=gene-GGE_0444;Dbxref=GeneID:237704836,NCBI_GP:EGT82796.1;Name=EGT82796.1;Note=ZP_04535317;gbkey=CDS;locus_tag=GGE_0444;product=phage-associated protein;protein_id=EGT82796.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3105 3495 . + . ID=id-GGE_0444;Note=superfamily%3B label: GepA superfamily;gbkey=misc_feature;locus_tag=GGE_0444 GCA_000222085.2|AFQR01000008.1 Genbank gene 3635 3943 . + . ID=gene-GGE_0445;Name=GGE_0445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0445 GCA_000222085.2|AFQR01000008.1 Genbank CDS 3635 3943 . + 0 ID=cds-EGT82797.1;Parent=gene-GGE_0445;Dbxref=GeneID:251793506,InterPro:IPR001387,InterPro:IPR010982,PFAM:PF01381,NCBI_GP:EGT82797.1;Name=EGT82797.1;Note=YP_003008235;Ontology_term=GO:0003677,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||;locus_tag=GGE_0445;product=putative regulatory protein;protein_id=EGT82797.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3698 3854 . + . ID=id-GGE_0445;Note=superfamily%3B label: HTH_XRE superfamily;gbkey=misc_feature;locus_tag=GGE_0445 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3737 3776 . + . ID=id-GGE_0445-2;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_0445 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3761 3794 . + . ID=id-GGE_0445-3;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0445 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3764 3797 . + . ID=id-GGE_0445-4;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_0445 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 3749 3764 . - . ID=id-AFQR01000008.1:3749..3764;Dbxref=InterPro:IPR001387,PFAM:PF01381;Note=hth_3~helix-turn-helix type 3;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 4337 5440 . + . ID=gene-GGE_0446;Name=GGE_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank CDS 4337 5440 . + 0 ID=cds-EGT82798.1;Parent=gene-GGE_0446;Dbxref=GeneID:319775448,InterPro:IPR011579,PFAM:PF01637,NCBI_GP:EGT82798.1;Name=EGT82798.1;Note=YP_004137936;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||;locus_tag=GGE_0446;product=putative aTPase domain%2C prokaryote;protein_id=EGT82798.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 4358 5099 . + . ID=id-GGE_0446;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 4364 4919 . + . ID=id-GGE_0446-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 4370 4373 . + . ID=id-GGE_0446-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 4385 4904 . + . ID=id-GGE_0446-4;Dbxref=InterPro:IPR011579,PFAM:PF01637;Note=arch_atpase~atpase domain%2C prokaryote;gbkey=misc_feature;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 4433 4832 . + . ID=id-GGE_0446-5;Note=multi-dom%3B label: Arch_ATPase;gbkey=misc_feature;locus_tag=GGE_0446 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 5441 5450 . + . ID=id-AFQR01000008.1:5441..5450;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 6017 7471 . - . ID=gene-GGE_0447;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank CDS 6017 7471 . - 0 ID=cds-EGT82799.1;Parent=gene-GGE_0447;Dbxref=GeneID:1172061,InterPro:IPR001160,InterPro:IPR002933,InterPro:IPR011650,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF016599,TIGRFAM:TIGR01893,NCBI_GP:EGT82799.1;Name=EGT82799.1;Ontology_term=GO:0008152,GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||;go_process=metabolic process|0008152||,proteolysis|0006508||;locus_tag=GGE_0447;product=Aminoacyl-histidine dipeptidase;protein_id=EGT82799.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6017 7469 . - . ID=id-GGE_0447;Dbxref=InterPro:IPR001160,PIR:PIRSF016599;Note=HMMPanther:PTHR11014:SF2~aminoacyl-histidine peptidase~peptidase m20c%2C xaa-his dipeptidase~HMMPanther:PTHR11014~family not named~aminoacyl-histidine dipeptidase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature;gene=pepD;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6038 7445 . - . ID=id-GGE_0447-2;Dbxref=InterPro:IPR001160,TIGRFAM:TIGR01893;Note=superfamily~aa-his-dipept: aminoacyl-histidine dipe~peptidase m20c%2C xaa-his dipeptidase%3B label: M20_dimer superfamily;gbkey=misc_feature;gene=pepD;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6044 7436 . - . ID=id-GGE_0447-3;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=pepD;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6233 7241 . - . ID=id-GGE_0447-4;Dbxref=InterPro:IPR002933,PFAM:PF01546;Note=peptidase_m20~peptidase m20;gbkey=misc_feature;gene=pepD;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6635 6644 . - . ID=id-GGE_0447-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=pepD;locus_tag=GGE_0447 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6068 7298 . + . ID=id-AFQR01000008.1:6068..7298;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6071 6632 . + . ID=id-AFQR01000008.1:6071..6632;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6071 6422 . + . ID=id-AFQR01000008.1:6071..6422;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6074 7103 . + . ID=id-AFQR01000008.1:6074..7103;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6074 6494 . + . ID=id-AFQR01000008.1:6074..6494;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6074 6320 . + . ID=id-AFQR01000008.1:6074..6320;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6077 6770 . + . ID=id-AFQR01000008.1:6077..6770;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6077 6257 . + . ID=id-AFQR01000008.1:6077..6257;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6086 7364 . + . ID=id-AFQR01000008.1:6086..7364;Dbxref=InterPro:IPR001160;Note=FPrintScan:PR00934~xhisdiptase~peptidase m20c%2C xaa-his dipeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6263 6635 . + . ID=id-AFQR01000008.1:6263..6635;Dbxref=InterPro:IPR011650,PFAM:PF07687;Note=m20_dimer~peptidase m20%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6281 7202 . + . ID=id-AFQR01000008.1:6281..7202;Note=Gene3D:3.40.630.10;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 6739 6748 . + . ID=id-AFQR01000008.1:6739..6748;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 7578 8045 . + . ID=gene-GGE_0448;Name=gpt2;gbkey=Gene;gene=gpt2;gene_biotype=protein_coding;locus_tag=GGE_0448 GCA_000222085.2|AFQR01000008.1 Genbank CDS 7578 8045 . + 0 ID=cds-EGT82800.1;Parent=gene-GGE_0448;Dbxref=GeneID:81336327,InterPro:IPR000836,PFAM:PF00156,NCBI_GP:EGT82800.1;Name=EGT82800.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gpt2;go_process=nucleoside metabolic process|0009116||;locus_tag=GGE_0448;product=Xanthine phosphoribosyltransferase 2;protein_id=EGT82800.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 7578 8043 . + . ID=id-GGE_0448;Note=superfamily~HAMAP:MF_01903~xgprt%3B label: Pribosyltran superfamily;gbkey=misc_feature;gene=gpt2;locus_tag=GGE_0448 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 7584 8025 . + . ID=id-GGE_0448-2;Note=Gene3D:3.40.50.2020;gbkey=misc_feature;gene=gpt2;locus_tag=GGE_0448 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 7587 8001 . + . ID=id-GGE_0448-3;Note=superfamily:SSF53271~prtase-like;gbkey=misc_feature;gene=gpt2;locus_tag=GGE_0448 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 7590 7902 . + . ID=id-GGE_0448-4;Dbxref=InterPro:IPR000836,PFAM:PF00156;Note=pribosyltran~phosphoribosyltransferase;gbkey=misc_feature;gene=gpt2;locus_tag=GGE_0448 GCA_000222085.2|AFQR01000008.1 Genbank gene 8122 9633 . - . ID=gene-GGE_0449;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank CDS 8122 9633 . - 0 ID=cds-EGT82801.1;Parent=gene-GGE_0449;Dbxref=GeneID:1169953,InterPro:IPR000577,InterPro:IPR005999,InterPro:IPR018483,InterPro:IPR018484,InterPro:IPR018485,PFAM:PF00370,PFAM:PF02782,TIGRFAM:TIGR01311,NCBI_GP:EGT82801.1;Name=EGT82801.1;Ontology_term=GO:0005975,GO:0006072,GO:0004370,GO:0016773;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||,phosphotransferase activity alcohol group as acceptor|0016773||;go_process=carbohydrate metabolic process|0005975||,glycerol-3-phosphate metabolic process|0006072||;locus_tag=GGE_0449;product=Glycerol kinase;protein_id=EGT82801.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8122 9631 . - . ID=id-GGE_0449;Dbxref=InterPro:IPR000577,InterPro:IPR005999;Note=HMMPanther:PTHR10196:SF9~glycerol kinase~glycerol kinase~HMMPanther:PTHR10196~sugar kinase~carbohydrate kinase%2C fggy;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8122 9616 . - . ID=id-GGE_0449-2;Note=multi-dom%3B label: glpK;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8128 8878 . - . ID=id-GGE_0449-3;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8134 9607 . - . ID=id-GGE_0449-4;Dbxref=InterPro:IPR005999;Note=HAMAP:MF_00186~glycerol_kin~glycerol kinase;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8137 9601 . - . ID=id-GGE_0449-5;Dbxref=InterPro:IPR005999,TIGRFAM:TIGR01311;Note=glycerol_kin: glycerol kinase~glycerol kinase;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8137 8878 . - . ID=id-GGE_0449-6;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8140 8866 . - . ID=id-GGE_0449-7;Dbxref=InterPro:IPR018484,PFAM:PF00370;Note=superfamily~fggy_n~carbohydrate kinase%2C fggy%3B label: FGGY_N superfamily;gbkey=misc_feature;gene=glpK;locus_tag=GGE_0449 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8161 8530 . + . ID=id-AFQR01000008.1:8161..8530;Dbxref=InterPro:IPR018483;Note=PatternScan:PS00933~fggy_kinases_1~carbohydrate kinase%2C fggy%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8164 9442 . + . ID=id-AFQR01000008.1:8164..9442;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8185 9211 . + . ID=id-AFQR01000008.1:8185..9211;Dbxref=InterPro:IPR018483;Note=PatternScan:PS00445~fggy_kinases_2~carbohydrate kinase%2C fggy%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8653 8908 . + . ID=id-AFQR01000008.1:8653..8908;Note=superfamily%3B label: FGGY_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8695 8908 . + . ID=id-AFQR01000008.1:8695..8908;Dbxref=InterPro:IPR018485,PFAM:PF02782;Note=fggy_c~carbohydrate kinase%2C fggy;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8854 8890 . + . ID=id-AFQR01000008.1:8854..8890;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 8860 8887 . + . ID=id-AFQR01000008.1:8860..8887;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 9654 10448 . - . ID=gene-GGE_0450;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank CDS 9654 10448 . - 0 ID=cds-EGT82802.1;Parent=gene-GGE_0450;Dbxref=GeneID:1169949,InterPro:IPR000425,InterPro:IPR012269,InterPro:IPR022357,InterPro:IPR023271,PFAM:PF00230,TIGRFAM:TIGR00861,NCBI_GP:EGT82802.1;Name=EGT82802.1;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;gene=glpF;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0450;product=Glycerol uptake facilitator protein;protein_id=EGT82802.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9654 9732 . - . ID=id-GGE_0450;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9660 10413 . - . ID=id-GGE_0450-2;Dbxref=InterPro:IPR023271;Note=Gene3D:1.20.1080.10~aquaporin-like;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9666 10425 . - . ID=id-GGE_0450-3;Dbxref=InterPro:IPR000425;Note=HMMPanther:PTHR19139:SF69~subfamily not named~HMMPanther:PTHR19139~family not named~major intrinsic protein;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9666 10416 . - . ID=id-GGE_0450-4;Dbxref=InterPro:IPR023271;Note=superfamily:SSF81338~aquaporin-like~aquaporin-like;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9672 10386 . - . ID=id-GGE_0450-5;Dbxref=InterPro:IPR000425,PFAM:PF00230;Note=mip~major intrinsic protein;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9675 9714 . - . ID=id-GGE_0450-6;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9678 10383 . - . ID=id-GGE_0450-7;Note=specific~superfamily%3B label: MIP;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9687 10371 . - . ID=id-GGE_0450-8;Dbxref=InterPro:IPR012269,TIGRFAM:TIGR00861;Note=mip: mip family channel proteins~aquaporin;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9693 9714 . - . ID=id-GGE_0450-9;Note=transmembrane_regions;gbkey=misc_feature;gene=glpF;locus_tag=GGE_0450 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9681 9846 . + . ID=id-AFQR01000008.1:9681..9846;Dbxref=InterPro:IPR022357;Note=PatternScan:PS00221~mip~major intrinsic protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9690 9939 . + . ID=id-AFQR01000008.1:9690..9939;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9705 10176 . + . ID=id-AFQR01000008.1:9705..10176;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9711 10101 . + . ID=id-AFQR01000008.1:9711..10101;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9714 9903 . + . ID=id-AFQR01000008.1:9714..9903;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9717 10350 . + . ID=id-AFQR01000008.1:9717..10350;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 10335 . + . ID=id-AFQR01000008.1:9723..10335;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 10200 . + . ID=id-AFQR01000008.1:9723..10200;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 10182 . + . ID=id-AFQR01000008.1:9723..10182;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 10080 . + . ID=id-AFQR01000008.1:9723..10080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 9906 . + . ID=id-AFQR01000008.1:9723..9906;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9723 9780 . + . ID=id-AFQR01000008.1:9723..9780;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 9729 9792 . + . ID=id-AFQR01000008.1:9729..9792;Dbxref=InterPro:IPR000425;Note=FPrintScan:PR00783~mintrinsicp~major intrinsic protein;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 10658 11773 . - . ID=gene-GGE_0451;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank CDS 10658 11773 . - 0 ID=cds-EGT82803.1;Parent=gene-GGE_0451;Dbxref=GeneID:1169954,InterPro:IPR004129,InterPro:IPR017946,PFAM:PF03009,NCBI_GP:EGT82803.1;Name=EGT82803.1;Ontology_term=GO:0006071,GO:0006629,GO:0008889,GO:0008081;gbkey=CDS;gene=glpQ;go_function=glycerophosphodiester phosphodiesterase activity|0008889||,phosphoric diester hydrolase activity|0008081||;go_process=glycerol metabolic process|0006071||,lipid metabolic process|0006629||;locus_tag=GGE_0451;product=Glycerophosphoryl diester phosphodiesterase;protein_id=EGT82803.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10658 10715 . - . ID=id-GGE_0451;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10676 10697 . - . ID=id-GGE_0451-2;Note=seg;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10757 11645 . - . ID=id-GGE_0451-3;Dbxref=InterPro:IPR017946;Note=superfamily:SSF51695~plc-like phosphodiesterases~plc-like phosphodiesterase%2C tim beta/alpha-barrel domain;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10763 11618 . - . ID=id-GGE_0451-4;Note=specific~superfamily%3B label: GDPD_EcGlpQ_like;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10766 11636 . - . ID=id-GGE_0451-5;Dbxref=InterPro:IPR004129;Note=HMMPanther:PTHR23344~family not named~glycerophosphoryl diester phosphodiesterase;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10766 11633 . - . ID=id-GGE_0451-6;Dbxref=InterPro:IPR017946;Note=Gene3D:3.20.20.190~plc-like phosphodiesterase%2C tim beta/alpha-barrel domain;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 10778 11606 . - . ID=id-GGE_0451-7;Dbxref=InterPro:IPR004129,PFAM:PF03009;Note=multi-dom~gdpd~glycerophosphoryl diester phosphodiesterase%3B label: GDPD;gbkey=misc_feature;gene=glpQ;locus_tag=GGE_0451 GCA_000222085.2|AFQR01000008.1 Genbank gene 11877 13319 . - . ID=gene-GGE_0452;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank CDS 11877 13319 . - 0 ID=cds-EGT82804.1;Parent=gene-GGE_0452;Dbxref=GeneID:3913741,InterPro:IPR000849,InterPro:IPR005267,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR021159,PFAM:PF07690,TIGRFAM:TIGR00712,TIGRFAM:TIGR00881,NCBI_GP:EGT82804.1;Name=EGT82804.1;Ontology_term=GO:0015794,GO:0055085,GO:0006810,GO:0016021,GO:0015169,GO:0005215;gbkey=CDS;gene=glpT;go_component=integral to membrane|0016021||;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||,transporter activity|0005215||;go_process=glycerol-3-phosphate transport|0015794||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0452;product=Glycerol-3-phosphate transporter;protein_id=EGT82804.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11877 13281 . - . ID=id-GGE_0452;Dbxref=InterPro:IPR005267,TIGRFAM:TIGR00712;Note=glpt: glycerol-3-phosphate transporter~glycerol-3-phosphate transporter;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11886 13218 . - . ID=id-GGE_0452-2;Note=multi-dom%3B label: glpT;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11892 13281 . - . ID=id-GGE_0452-3;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11895 13260 . - . ID=id-GGE_0452-4;Note=HMMPanther:PTHR11662:SF13~glycerol-3-phosphate transporter (hexose transporter)~HMMPanther:PTHR11662~family not named;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11949 12513 . - . ID=id-GGE_0452-5;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11952 13209 . - . ID=id-GGE_0452-6;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11970 12858 . - . ID=id-GGE_0452-7;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11979 13059 . - . ID=id-GGE_0452-8;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11982 13110 . - . ID=id-GGE_0452-9;Dbxref=InterPro:IPR000849,TIGRFAM:TIGR00881;Note=2a0104: phosphoglycerate transporter family~glpt transporter;gbkey=misc_feature;gene=glpT;locus_tag=GGE_0452 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11922 13227 . + . ID=id-AFQR01000008.1:11922..13227;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11928 12339 . + . ID=id-AFQR01000008.1:11928..12339;Dbxref=InterPro:IPR021159;Note=PatternScan:PS00942~glpt~glycerate/sugar phosphate transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11934 11961 . + . ID=id-AFQR01000008.1:11934..11961;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11937 13212 . + . ID=id-AFQR01000008.1:11937..13212;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11937 12795 . + . ID=id-AFQR01000008.1:11937..12795;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11937 12678 . + . ID=id-AFQR01000008.1:11937..12678;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11937 12480 . + . ID=id-AFQR01000008.1:11937..12480;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 13116 . + . ID=id-AFQR01000008.1:11946..13116;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 13086 . + . ID=id-AFQR01000008.1:11946..13086;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 13014 . + . ID=id-AFQR01000008.1:11946..13014;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 12888 . + . ID=id-AFQR01000008.1:11946..12888;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 12369 . + . ID=id-AFQR01000008.1:11946..12369;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 12240 . + . ID=id-AFQR01000008.1:11946..12240;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 12162 . + . ID=id-AFQR01000008.1:11946..12162;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 11946 12075 . + . ID=id-AFQR01000008.1:11946..12075;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 12498 12660 . + . ID=id-AFQR01000008.1:12498..12660;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 13613 15304 . + . ID=gene-GGE_0453;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank CDS 13613 15304 . + 0 ID=cds-EGT82805.1;Parent=gene-GGE_0453;Dbxref=GeneID:1169945,InterPro:IPR000447,InterPro:IPR006076,InterPro:IPR007419,InterPro:IPR017752,PFAM:PF01266,PFAM:PF04324,TIGRFAM:TIGR03377,NCBI_GP:EGT82805.1;Name=EGT82805.1;Ontology_term=GO:0006072,GO:0055114,GO:0046174,GO:0009331,GO:0005886,GO:0010181,GO:0050660,GO:0004368,GO:0016491;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||,plasma membrane|0005886||;go_function=FMN binding|0010181||,flavin adenine dinucleotide binding|0050660||,glycerol-3-phosphate dehydrogenase activity|0004368||,oxidoreductase activity|0016491||;go_process=glycerol-3-phosphate metabolic process|0006072||,oxidation-reduction process|0055114||,polyol catabolic process|0046174||;locus_tag=GGE_0453;product=Anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=EGT82805.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13652 15266 . + . ID=id-GGE_0453;Note=multi-dom%3B label: glpA;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13667 14561 . + . ID=id-GGE_0453-2;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13673 15206 . + . ID=id-GGE_0453-3;Dbxref=InterPro:IPR017752,TIGRFAM:TIGR03377;Note=glycerol3p_glpa: glycerol-3-phosphate~glycerol-3-phosphate dehydrogenase%2C anaerobic a subunit;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13673 15035 . + . ID=id-GGE_0453-4;Note=HMMPanther:PTHR11985~family not named;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13673 14618 . + . ID=id-GGE_0453-5;Dbxref=InterPro:IPR006076,PFAM:PF01266;Note=dao~fad dependent oxidoreductase;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13982 14246 . + . ID=id-GGE_0453-6;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;gene=glpA;locus_tag=GGE_0453 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13634 14576 . - . ID=id-AFQR01000008.1:13634..14576;Dbxref=InterPro:IPR000447;Note=FPrintScan:PR01001~fadg3pdh~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13646 14699 . - . ID=id-AFQR01000008.1:13646..14699;Dbxref=InterPro:IPR000447;Note=PatternScan:PS00978~fad_g3pdh_2~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13646 13709 . - . ID=id-AFQR01000008.1:13646..13709;Dbxref=InterPro:IPR000447;Note=FPrintScan:PR01001~fadg3pdh~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13652 14684 . - . ID=id-AFQR01000008.1:13652..14684;Dbxref=InterPro:IPR000447;Note=FPrintScan:PR01001~fadg3pdh~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13652 13757 . - . ID=id-AFQR01000008.1:13652..13757;Dbxref=InterPro:IPR000447;Note=FPrintScan:PR01001~fadg3pdh~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13652 13679 . - . ID=id-AFQR01000008.1:13652..13679;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13652 13670 . - . ID=id-AFQR01000008.1:13652..13670;Dbxref=InterPro:IPR000447;Note=FPrintScan:PR01001~fadg3pdh~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13667 13685 . - . ID=id-AFQR01000008.1:13667..13685;Dbxref=InterPro:IPR000447;Note=PatternScan:PS00977~fad_g3pdh_1~fad-dependent glycerol-3-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13736 14939 . - . ID=id-AFQR01000008.1:13736..14939;Dbxref=InterPro:IPR007419,PFAM:PF04324;Note=fer2_bfd~bfd-like [2fe-2s]-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13751 14630 . - . ID=id-AFQR01000008.1:13751..14630;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13772 14942 . - . ID=id-AFQR01000008.1:13772..14942;Note=superfamily%3B label: Fer2_BFD superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 13931 14276 . - . ID=id-AFQR01000008.1:13931..14276;Note=Gene3D:3.30.9.10;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 15294 16592 . + . ID=gene-GGE_0454;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=GGE_0454 GCA_000222085.2|AFQR01000008.1 Genbank CDS 15294 16592 . + 0 ID=cds-EGT82806.1;Parent=gene-GGE_0454;Dbxref=GeneID:1169946,InterPro:IPR003953,InterPro:IPR009158,PFAM:PF00890,PIR:PIRSF000141,TIGRFAM:TIGR03378,NCBI_GP:EGT82806.1;Name=EGT82806.1;Ontology_term=GO:0055114,GO:0009055,GO:0004368,GO:0016491;gbkey=CDS;gene=glpB;go_function=electron carrier activity|0009055||,glycerol-3-phosphate dehydrogenase activity|0004368||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0454;product=Anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=EGT82806.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15294 16590 . + . ID=id-GGE_0454;Dbxref=InterPro:IPR009158,PIR:PIRSF000141;Note=multi-dom~anaerobic glycerol-3-phosphate dehydrogenase%2C subunit b~glycerol-3-phosphate dehydrogenase%2C anaerobic b subunit~superfamily:SSF51905~fad/nad(p)-binding domain~HAMAP:MF_00753~glycerol3p_glpb~glycerol-3-phosphate dehydrogenase%2C anaerobic b subunit%3B label: PRK05329;gbkey=misc_feature;gene=glpB;locus_tag=GGE_0454 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15300 15393 . + . ID=id-GGE_0454-2;Note=HMMPanther:PTHR10668~phytoene dehydrogenase;gbkey=misc_feature;gene=glpB;locus_tag=GGE_0454 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15303 16578 . + . ID=id-GGE_0454-3;Dbxref=InterPro:IPR009158,TIGRFAM:TIGR03378;Note=superfamily~glycerol3p_glpb: glycerol-3-phosphate~glycerol-3-phosphate dehydrogenase%2C anaerobic b subunit%3B label: GlpB superfamily;gbkey=misc_feature;gene=glpB;locus_tag=GGE_0454 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15306 16536 . + . ID=id-GGE_0454-4;Dbxref=InterPro:IPR003953,PFAM:PF00890;Note=fad_binding_2~fumarate reductase/succinate dehydrogenase flavoprotein;gbkey=misc_feature;gene=glpB;locus_tag=GGE_0454 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15360 15552 . - . ID=id-AFQR01000008.1:15360..15552;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 15765 16116 . - . ID=id-AFQR01000008.1:15765..16116;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 16603 17883 . + . ID=gene-GGE_0455;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank CDS 16603 17883 . + 0 ID=cds-EGT82807.1;Parent=gene-GGE_0455;Dbxref=GeneID:1169947,InterPro:IPR004017,InterPro:IPR009051,InterPro:IPR012285,InterPro:IPR017753,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF02754,TIGRFAM:TIGR03379,NCBI_GP:EGT82807.1;Name=EGT82807.1;Ontology_term=GO:0055114,GO:0006810,GO:0016020,GO:0009055,GO:0051536,GO:0016491;gbkey=CDS;gene=glpC;go_component=membrane|0016020||;go_function=electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,transport|0006810||;locus_tag=GGE_0455;product=Anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=EGT82807.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16630 16912 . + . ID=id-GGE_0455;Note=superfamily%3B label: HCP_like superfamily;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16633 17854 . + . ID=id-GGE_0455-2;Note=HMMPanther:PTHR11921:SF7~subfamily not named~HMMPanther:PTHR11921~family not named;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16636 16915 . + . ID=id-GGE_0455-3;Dbxref=InterPro:IPR012285;Note=Gene3D:1.10.1060.10~fumarate reductase;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16642 16900 . + . ID=id-GGE_0455-4;Dbxref=InterPro:IPR009051;Note=superfamily:SSF46548~alpha-helical ferredoxin~alpha-helical ferredoxin;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16666 16702 . + . ID=id-GGE_0455-5;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16681 17803 . + . ID=id-GGE_0455-6;Dbxref=InterPro:IPR017753,TIGRFAM:TIGR03379;Note=multi-dom~glycerol3p_glpc: glycerol-3-phosphate~glycerol-3-phosphate dehydrogenase%2C anaerobic c subunit%3B label: glycerol3P_GlpC;gbkey=misc_feature;gene=glpC;locus_tag=GGE_0455 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16639 16840 . - . ID=id-AFQR01000008.1:16639..16840;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16639 16699 . - . ID=id-AFQR01000008.1:16639..16699;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16684 16804 . - . ID=id-AFQR01000008.1:16684..16804;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16774 17269 . - . ID=id-AFQR01000008.1:16774..17269;Note=superfamily%3B label: CCG superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16789 17638 . - . ID=id-AFQR01000008.1:16789..17638;Dbxref=InterPro:IPR004017,PFAM:PF02754;Note=ccg~cysteine-rich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16789 17254 . - . ID=id-AFQR01000008.1:16789..17254;Dbxref=InterPro:IPR004017,PFAM:PF02754;Note=ccg~cysteine-rich domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 16792 17635 . - . ID=id-AFQR01000008.1:16792..17635;Note=superfamily%3B label: CCG superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 18251 19243 . - . ID=gene-GGE_0456;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank CDS 18251 19243 . - 0 ID=cds-EGT82808.1;Parent=gene-GGE_0456;Dbxref=GeneID:81336433,InterPro:IPR004618,InterPro:IPR006195,PFAM:PF03590,PIR:PIRSF001555,TIGRFAM:TIGR00669,NCBI_GP:EGT82808.1;Name=EGT82808.1;Ontology_term=GO:0006529,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004071,GO:0000166;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,aspartate-ammonia ligase activity|0004071||,nucleotide binding|0000166||;go_process=asparagine biosynthetic process|0006529||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0456;product=Aspartate--ammonia ligase;protein_id=EGT82808.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18251 19241 . - . ID=id-GGE_0456;Dbxref=InterPro:IPR004618,PIR:PIRSF001555,TIGRFAM:TIGR00669;Note=aspartate-ammonia ligase~aspartate--ammonia ligase~asna: aspartate--ammonia ligase~aspartate--ammonia ligase~HAMAP:MF_00555~asna~aspartate--ammonia ligase;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18257 19232 . - . ID=id-GGE_0456-2;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18260 18983 . - . ID=id-GGE_0456-3;Dbxref=InterPro:IPR004618,PFAM:PF03590;Note=asna~aspartate--ammonia ligase;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18263 19232 . - . ID=id-GGE_0456-4;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18278 19205 . - . ID=id-GGE_0456-5;Note=specific~superfamily%3B label: AsnA;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 18290 19205 . - . ID=id-GGE_0456-6;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=asnA;locus_tag=GGE_0456 GCA_000222085.2|AFQR01000008.1 Genbank gene 19395 19847 . + . ID=gene-GGE_0457;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank CDS 19395 19847 . + 0 ID=cds-EGT82809.1;Parent=gene-GGE_0457;Dbxref=GeneID:1168532,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019885,InterPro:IPR019887,PFAM:PF01037,NCBI_GP:EGT82809.1;Name=EGT82809.1;Ontology_term=GO:0006355,GO:0005622,GO:0043565,GO:0003700;gbkey=CDS;gene=asnC;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0457;product=Regulatory protein AsnC;protein_id=EGT82809.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19395 19845 . + . ID=id-GGE_0457;Note=multi-dom%3B label: PRK11179;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19395 19560 . + . ID=id-GGE_0457-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19401 19584 . + . ID=id-GGE_0457-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19407 19719 . + . ID=id-GGE_0457-4;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19407 19581 . + . ID=id-GGE_0457-5;Dbxref=InterPro:IPR000485;Note=ProfileScan:PS50956~hth_asnc_2~transcription regulator hth%2C asnc-type;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19407 19446 . + . ID=id-GGE_0457-6;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19461 19476 . + . ID=id-GGE_0457-7;Dbxref=InterPro:IPR019885;Note=PatternScan:PS00519~hth_asnc_1~transcription regulator hth%2C asnc-type%2C conserved site;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19566 19641 . + . ID=id-GGE_0457-8;Dbxref=InterPro:IPR019887;Note=Gene3D:3.30.70.920~transcription regulator asnc-type;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19590 19653 . + . ID=id-GGE_0457-9;Dbxref=InterPro:IPR011008;Note=superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel;gbkey=misc_feature;gene=asnC;locus_tag=GGE_0457 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19431 19455 . - . ID=id-AFQR01000008.1:19431..19455;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19455 19488 . - . ID=id-AFQR01000008.1:19455..19488;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19605 19611 . - . ID=id-AFQR01000008.1:19605..19611;Dbxref=InterPro:IPR019887,PFAM:PF01037;Note=asnc_trans_reg~transcription regulator asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 19873 20268 . - . ID=gene-GGE_0458;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank CDS 19873 20268 . - 0 ID=cds-EGT82810.1;Parent=gene-GGE_0458;Dbxref=GeneID:1176867,InterPro:IPR002942,PFAM:PF01479,NCBI_GP:EGT82810.1;Name=EGT82810.1;Ontology_term=GO:0003723;gbkey=CDS;gene=hslR;go_function=RNA binding|0003723||;locus_tag=GGE_0458;product=Heat shock protein 15;protein_id=EGT82810.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19879 20185 . - . ID=id-GGE_0458;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature;gene=hslR;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19879 20176 . - . ID=id-GGE_0458-2;Note=Gene3D:3.10.290.10;gbkey=misc_feature;gene=hslR;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19891 20059 . - . ID=id-GGE_0458-3;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature;gene=hslR;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19891 20050 . - . ID=id-GGE_0458-4;Note=specific~superfamily%3B label: S4;gbkey=misc_feature;gene=hslR;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 19891 20011 . - . ID=id-GGE_0458-5;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature;gene=hslR;locus_tag=GGE_0458 GCA_000222085.2|AFQR01000008.1 Genbank gene 20339 20686 . + . ID=gene-GGE_0459;Name=GGE_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank CDS 20339 20686 . + 0 ID=cds-EGT82811.1;Parent=gene-GGE_0459;Dbxref=InterPro:IPR000086,InterPro:IPR015797,NCBI_GP:EGT82811.1;Name=EGT82811.1;Note=Hypothetical nUDIX hydrolase domain;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||;locus_tag=GGE_0459;product=putative nUDIX hydrolase domain-containing protein;protein_id=EGT82811.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20345 20678 . + . ID=id-GGE_0459;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20354 20666 . + . ID=id-GGE_0459-2;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20366 20618 . + . ID=id-GGE_0459-3;Note=HMMPanther:PTHR11839~family not named;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20480 20546 . + . ID=id-GGE_0459-4;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20492 20522 . + . ID=id-GGE_0459-5;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20495 20519 . + . ID=id-GGE_0459-6;Note=specific~superfamily%3B label: ADPRase_NUDT5;gbkey=misc_feature;locus_tag=GGE_0459 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20405 20585 . - . ID=id-AFQR01000008.1:20405..20585;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20689 20881 . + . ID=id-AFQR01000008.1:20689..20881;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20689 20872 . + . ID=id-AFQR01000008.1:20689..20872;Note=superfamily%3B label: Nudix_Hydrolase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20692 20884 . + . ID=id-AFQR01000008.1:20692..20884;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 20853 20862 . - . ID=id-AFQR01000008.1:20853..20862;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 21139 23118 . + . ID=gene-GGE_0460;Name=GGE_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank CDS 21139 23118 . + 0 ID=cds-EGT82812.1;Parent=gene-GGE_0460;Dbxref=GeneID:2506742,InterPro:IPR004813,InterPro:IPR004814,PFAM:PF03169,TIGRFAM:TIGR00728,TIGRFAM:TIGR00733,NCBI_GP:EGT82812.1;Name=EGT82812.1;Note=HI_0561;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||;locus_tag=GGE_0460;product=Putative oligopeptide transporter;protein_id=EGT82812.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21139 22978 . + . ID=id-GGE_0460;Dbxref=InterPro:IPR004813,TIGRFAM:TIGR00728;Note=opt_sfam: oligopeptide transporters%2C opt su~oligopeptide transporter opt superfamily;gbkey=misc_feature;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21148 23002 . + . ID=id-GGE_0460-2;Note=superfamily%3B label: COG1297 superfamily;gbkey=misc_feature;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21163 22948 . + . ID=id-GGE_0460-3;Dbxref=InterPro:IPR004814,TIGRFAM:TIGR00733;Note=multi-dom~tigr00733: oligopeptide transporter%2C opt fa~oligopeptide transporter opt%3B label: TIGR00733;gbkey=misc_feature;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21163 22942 . + . ID=id-GGE_0460-4;Dbxref=InterPro:IPR004813,PFAM:PF03169;Note=opt~oligopeptide transporter opt superfamily;gbkey=misc_feature;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21169 21208 . + . ID=id-GGE_0460-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0460 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21175 21838 . - . ID=id-AFQR01000008.1:21175..21838;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21178 23047 . - . ID=id-AFQR01000008.1:21178..23047;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21190 21727 . - . ID=id-AFQR01000008.1:21190..21727;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21199 22351 . - . ID=id-AFQR01000008.1:21199..22351;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21205 22252 . - . ID=id-AFQR01000008.1:21205..22252;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 23032 . - . ID=id-AFQR01000008.1:21208..23032;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22906 . - . ID=id-AFQR01000008.1:21208..22906;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22768 . - . ID=id-AFQR01000008.1:21208..22768;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22657 . - . ID=id-AFQR01000008.1:21208..22657;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22468 . - . ID=id-AFQR01000008.1:21208..22468;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22141 . - . ID=id-AFQR01000008.1:21208..22141;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 22054 . - . ID=id-AFQR01000008.1:21208..22054;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 21901 . - . ID=id-AFQR01000008.1:21208..21901;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 21748 . - . ID=id-AFQR01000008.1:21208..21748;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 21598 . - . ID=id-AFQR01000008.1:21208..21598;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 21430 . - . ID=id-AFQR01000008.1:21208..21430;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21208 21352 . - . ID=id-AFQR01000008.1:21208..21352;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 21226 22225 . - . ID=id-AFQR01000008.1:21226..22225;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 23172 23588 . + . ID=gene-GGE_0461;Name=GGE_0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0461 GCA_000222085.2|AFQR01000008.1 Genbank CDS 23172 23588 . + 0 ID=cds-EGT82813.1;Parent=gene-GGE_0461;Dbxref=GeneID:6831719,NCBI_GP:EGT82813.1;Name=EGT82813.1;Note=HI_0559.1;gbkey=CDS;locus_tag=GGE_0461;product=hypothetical protein;protein_id=EGT82813.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23193 23232 . + . ID=id-GGE_0461;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0461 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23214 23379 . - . ID=id-AFQR01000008.1:23214..23379;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23228 23237 . - . ID=id-AFQR01000008.1:23228..23237;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23232 23295 . - . ID=id-AFQR01000008.1:23232..23295;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23241 23502 . - . ID=id-AFQR01000008.1:23241..23502;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23241 23391 . - . ID=id-AFQR01000008.1:23241..23391;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23333 23342 . - . ID=id-AFQR01000008.1:23333..23342;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 23593 24402 . + . ID=gene-GGE_0462;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank CDS 23593 24402 . + 0 ID=cds-EGT82814.1;Parent=gene-GGE_0462;Dbxref=GeneID:205371748,InterPro:IPR000760,InterPro:IPR006240,InterPro:IPR020550,InterPro:IPR020583,PFAM:PF00459,TIGRFAM:TIGR01331,NCBI_GP:EGT82814.1;Name=EGT82814.1;Ontology_term=GO:0016020,GO:0004437,GO:0000287;gbkey=CDS;gene=cysQ;go_component=membrane|0016020||;go_function=inositol or phosphatidylinositol phosphatase activity|0004437||,magnesium ion binding|0000287||;locus_tag=GGE_0462;product=putative nucleotidase CysQ-like protein;protein_id=EGT82814.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23599 24370 . + . ID=id-GGE_0462;Note=superfamily:SSF56655~carbohydrate phosphatase;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23611 24340 . + . ID=id-GGE_0462-2;Dbxref=InterPro:IPR000760;Note=HMMPanther:PTHR20854:SF5~diphosphonucleoside phosphohydrolase~HMMPanther:PTHR20854~family not named~inositol monophosphatase;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23611 23959 . + . ID=id-GGE_0462-3;Note=Gene3D:3.30.540.10;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23617 24340 . + . ID=id-GGE_0462-4;Dbxref=InterPro:IPR006240,TIGRFAM:TIGR01331;Note=bisphos_cysq: 3'(2')%2C5'-bisphosphate nuc~3(2)%2C5 -bisphosphate nucleotidase%2C bacterial;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23617 24334 . + . ID=id-GGE_0462-5;Note=specific~superfamily%3B label: CysQ;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23629 24310 . + . ID=id-GGE_0462-6;Dbxref=InterPro:IPR000760,PFAM:PF00459;Note=inositol_p~inositol monophosphatase;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23977 24010 . + . ID=id-GGE_0462-7;Note=Gene3D:3.40.190.80;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24105 24114 . + . ID=id-GGE_0462-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=cysQ;locus_tag=GGE_0462 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23632 24151 . - . ID=id-AFQR01000008.1:23632..24151;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23635 23851 . - . ID=id-AFQR01000008.1:23635..23851;Dbxref=InterPro:IPR020583;Note=PatternScan:PS00629~imp_1~inositol monophosphatase%2C metal-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23638 24238 . - . ID=id-AFQR01000008.1:23638..24238;Dbxref=InterPro:IPR020550;Note=PatternScan:PS00630~imp_2~inositol monophosphatase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23644 23851 . - . ID=id-AFQR01000008.1:23644..23851;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23644 23779 . - . ID=id-AFQR01000008.1:23644..23779;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23656 23713 . - . ID=id-AFQR01000008.1:23656..23713;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23668 24229 . - . ID=id-AFQR01000008.1:23668..24229;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 23763 23772 . - . ID=id-AFQR01000008.1:23763..23772;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 24477 25961 . + . ID=gene-GGE_0463;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank CDS 24477 25961 . + 0 ID=cds-EGT82815.1;Parent=gene-GGE_0463;Dbxref=GeneID:1169801,InterPro:IPR001282,InterPro:IPR016040,InterPro:IPR019796,InterPro:IPR022674,InterPro:IPR022675,PFAM:PF00479,PFAM:PF02781,PIR:PIRSF000110,TIGRFAM:TIGR00871,NCBI_GP:EGT82815.1;Name=EGT82815.1;Ontology_term=GO:0006006,GO:0008152,GO:0055114,GO:0050661,GO:0005488,GO:0003824,GO:0004345;gbkey=CDS;gene=zwf;go_function=NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,glucose-6-phosphate dehydrogenase activity|0004345||;go_process=glucose metabolic process|0006006||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0463;product=Glucose-6-phosphate 1-dehydrogenase;protein_id=EGT82815.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24477 25938 . + . ID=id-GGE_0463;Dbxref=InterPro:IPR001282,PIR:PIRSF000110;Note=glucose-6-phosphate dehydrogenase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24477 25935 . + . ID=id-GGE_0463-2;Note=multi-dom%3B label: PRK05722;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24477 25086 . + . ID=id-GGE_0463-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24486 25035 . + . ID=id-GGE_0463-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24489 25926 . + . ID=id-GGE_0463-5;Dbxref=InterPro:IPR001282,TIGRFAM:TIGR00871;Note=zwf: glucose-6-phosphate dehydrogenase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24498 25911 . + . ID=id-GGE_0463-6;Dbxref=InterPro:IPR001282;Note=HMMPanther:PTHR23429~family not named~glucose-6-phosphate dehydrogenase;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24504 25020 . + . ID=id-GGE_0463-7;Dbxref=InterPro:IPR022674,PFAM:PF00479;Note=superfamily~g6pd_n~glucose-6-phosphate dehydrogenase%2C nad-binding%3B label: G6PD_N superfamily;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 25014 25416 . + . ID=id-GGE_0463-8;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 25044 25365 . + . ID=id-GGE_0463-9;Note=Gene3D:3.30.360.10;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 25050 25365 . + . ID=id-GGE_0463-10;Note=superfamily%3B label: G6PD_C superfamily;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 25050 25362 . + . ID=id-GGE_0463-11;Dbxref=InterPro:IPR022675,PFAM:PF02781;Note=g6pd_c~glucose-6-phosphate dehydrogenase;gbkey=misc_feature;gene=zwf;locus_tag=GGE_0463 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24498 25014 . - . ID=id-AFQR01000008.1:24498..25014;Dbxref=InterPro:IPR019796;Note=PatternScan:PS00069~g6p_dehydrogenase~glucose-6-phosphate dehydrogenase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24519 24912 . - . ID=id-AFQR01000008.1:24519..24912;Dbxref=InterPro:IPR001282;Note=FPrintScan:PR00079~g6pdhdrgnase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24528 25194 . - . ID=id-AFQR01000008.1:24528..25194;Dbxref=InterPro:IPR001282;Note=FPrintScan:PR00079~g6pdhdrgnase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24531 25140 . - . ID=id-AFQR01000008.1:24531..25140;Dbxref=InterPro:IPR001282;Note=FPrintScan:PR00079~g6pdhdrgnase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24558 25467 . - . ID=id-AFQR01000008.1:24558..25467;Dbxref=InterPro:IPR001282;Note=FPrintScan:PR00079~g6pdhdrgnase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 24564 24984 . - . ID=id-AFQR01000008.1:24564..24984;Dbxref=InterPro:IPR001282;Note=FPrintScan:PR00079~g6pdhdrgnase~glucose-6-phosphate dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 26050 26748 . + . ID=gene-GGE_0464;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank CDS 26050 26748 . + 0 ID=cds-EGT82816.1;Parent=gene-GGE_0464;Dbxref=GeneID:7404327,InterPro:IPR005900,InterPro:IPR006148,PFAM:PF01182,TIGRFAM:TIGR01198,NCBI_GP:EGT82816.1;Name=EGT82816.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||;go_process=carbohydrate metabolic process|0005975||,pentose-phosphate shunt|0006098||;locus_tag=GGE_0464;product=6-phosphogluconolactonase;protein_id=EGT82816.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26050 26746 . + . ID=id-GGE_0464;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26050 26728 . + . ID=id-GGE_0464-2;Note=Gene3D:3.40.50.1360;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26050 26134 . + . ID=id-GGE_0464-3;Note=BlastProDom:PD884061~y557_haein_p44015;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26059 26740 . + . ID=id-GGE_0464-4;Dbxref=InterPro:IPR005900,TIGRFAM:TIGR01198;Note=pgl: 6-phosphogluconolactonase~6-phosphogluconolactonase%2C devb-type;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26077 26698 . + . ID=id-GGE_0464-5;Note=specific~superfamily%3B label: 6PGL;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26125 26398 . + . ID=id-GGE_0464-6;Dbxref=InterPro:IPR006148,PFAM:PF01182;Note=glucosamine_iso~glucosamine/galactosamine-6-phosphate isomerase;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26143 26656 . + . ID=id-GGE_0464-7;Note=HMMPanther:PTHR11054~family not named;gbkey=misc_feature;gene=pgl;locus_tag=GGE_0464 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26366 26375 . - . ID=id-AFQR01000008.1:26366..26375;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 26781 27173 . + . ID=gene-GGE_0465;Name=GGE_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank CDS 26781 27173 . + 0 ID=cds-EGT82817.1;Parent=gene-GGE_0465;Dbxref=GeneID:301155367,InterPro:IPR000182,InterPro:IPR016181,PFAM:PF00583,NCBI_GP:EGT82817.1;Name=EGT82817.1;Note=CBW14833;Ontology_term=GO:0008152,GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||;go_process=metabolic process|0008152||;locus_tag=GGE_0465;product=Hypothetical protein;protein_id=EGT82817.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26787 27168 . + . ID=id-GGE_0465;Dbxref=InterPro:IPR000182;Note=ProfileScan:PS51186~gnat~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26787 27141 . + . ID=id-GGE_0465-2;Dbxref=InterPro:IPR016181;Note=superfamily:SSF55729~acyl-coa n-acyltransferases (nat)~acyl-coa n-acyltransferase;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26802 27129 . + . ID=id-GGE_0465-3;Dbxref=InterPro:IPR016181;Note=Gene3D:3.40.630.30~acyl-coa n-acyltransferase;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26820 27036 . + . ID=id-GGE_0465-4;Note=HMMPanther:PTHR23091~family not named;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26919 26940 . + . ID=id-GGE_0465-5;Note=specific~superfamily%3B label: NAT_SF;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 26928 27000 . + . ID=id-GGE_0465-6;Dbxref=InterPro:IPR000182,PFAM:PF00583;Note=acetyltransf_1~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;locus_tag=GGE_0465 GCA_000222085.2|AFQR01000008.1 Genbank gene 27234 27566 . + . ID=gene-GGE_0466;Name=GGE_0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0466 GCA_000222085.2|AFQR01000008.1 Genbank CDS 27234 27566 . + 0 ID=cds-EGT82818.1;Parent=gene-GGE_0466;Dbxref=GeneID:301155366,NCBI_GP:EGT82818.1;Name=EGT82818.1;Note=CBW14832;gbkey=CDS;locus_tag=GGE_0466;product=Hypothetical protein;protein_id=EGT82818.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank gene 27666 29120 . + . ID=gene-GGE_0467;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank CDS 27666 29120 . + 0 ID=cds-EGT82819.1;Parent=gene-GGE_0467;Dbxref=GeneID:1168235,InterPro:IPR006113,InterPro:IPR006114,InterPro:IPR006115,InterPro:IPR006184,InterPro:IPR008927,InterPro:IPR012284,InterPro:IPR013328,InterPro:IPR016040,PFAM:PF00393,PFAM:PF03446,TIGRFAM:TIGR00873,NCBI_GP:EGT82819.1;Name=EGT82819.1;Ontology_term=GO:0008152,GO:0055114,GO:0006098,GO:0050661,GO:0005488,GO:0003824,GO:0050662,GO:0016491,GO:0004616;gbkey=CDS;gene=gnd;go_function=NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,oxidoreductase activity|0016491||,phosphogluconate dehydrogenase (decarboxylating) activity|0004616||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||,pentose-phosphate shunt|0006098||;locus_tag=GGE_0467;product=6-phosphogluconate dehydrogenase%2C decarboxylating;protein_id=EGT82819.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27675 28194 . + . ID=id-GGE_0467;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27681 27738 . + . ID=id-GGE_0467-2;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27684 29103 . + . ID=id-GGE_0467-3;Note=HMMPanther:PTHR11811~family not named;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27684 29067 . + . ID=id-GGE_0467-4;Dbxref=InterPro:IPR006113,TIGRFAM:TIGR00873;Note=gnd: 6-phosphogluconate dehydrogenase%2C decar~6-phosphogluconate dehydrogenase%2C decarboxylating;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27684 28569 . + . ID=id-GGE_0467-5;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27684 28197 . + . ID=id-GGE_0467-6;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27684 28179 . + . ID=id-GGE_0467-7;Dbxref=InterPro:IPR006115,PFAM:PF03446;Note=nad_binding_2~6-phosphogluconate dehydrogenase%2C nad-binding;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27711 29046 . + . ID=id-GGE_0467-8;Note=multi-dom%3B label: PRK09287;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 28203 28560 . + . ID=id-GGE_0467-9;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 28209 28539 . + . ID=id-GGE_0467-10;Dbxref=InterPro:IPR006114,PFAM:PF00393;Note=superfamily~6pgd~6-phosphogluconate dehydrogenase%3B label: 6PGD superfamily;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 28215 28425 . + . ID=id-GGE_0467-11;Dbxref=InterPro:IPR013328;Note=Gene3D:1.10.1040.10~dehydrogenase%2C multihelical;gbkey=misc_feature;gene=gnd;locus_tag=GGE_0467 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27705 28431 . - . ID=id-AFQR01000008.1:27705..28431;Dbxref=InterPro:IPR006184;Note=PatternScan:PS00461~6pgd~6-phosphogluconate-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27735 28740 . - . ID=id-AFQR01000008.1:27735..28740;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27744 28029 . - . ID=id-AFQR01000008.1:27744..28029;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27750 28419 . - . ID=id-AFQR01000008.1:27750..28419;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27753 28176 . - . ID=id-AFQR01000008.1:27753..28176;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27756 27870 . - . ID=id-AFQR01000008.1:27756..27870;Note=FPrintScan:PR00076~6pgdhdrgnase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 27804 28980 . - . ID=id-AFQR01000008.1:27804..28980;Dbxref=InterPro:IPR012284;Note=Gene3D:1.20.5.320~fibritin/6-phosphogluconate dehydrogenase extension;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29141 29150 . - . ID=id-AFQR01000008.1:29141..29150;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29159 29168 . + . ID=id-AFQR01000008.1:29159..29168;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 29253 30575 . - . ID=gene-GGE_0468;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank CDS 29253 30575 . - 0 ID=cds-EGT82820.1;Parent=gene-GGE_0468;Dbxref=GeneID:1169253,InterPro:IPR004668,PFAM:PF03605,PIR:PIRSF004539,TIGRFAM:TIGR00770,NCBI_GP:EGT82820.1;Name=EGT82820.1;Ontology_term=GO:0015740,GO:0016021,GO:0015556;gbkey=CDS;gene=dcuB;go_component=integral to membrane|0016021||;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||;go_process=C4-dicarboxylate transport|0015740||;locus_tag=GGE_0468;product=Anaerobic C4-dicarboxylate transporter dcuB;protein_id=EGT82820.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29253 30573 . - . ID=id-GGE_0468;Dbxref=InterPro:IPR004668,PIR:PIRSF004539;Note=anaerobic c4-dicarboxylate transporter~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29265 30564 . - . ID=id-GGE_0468-2;Note=superfamily%3B label: DcuA_DcuB superfamily;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29277 30552 . - . ID=id-GGE_0468-3;Dbxref=InterPro:IPR004668,TIGRFAM:TIGR00770;Note=dcu: transporter%2C anaerobic c4-dicarboxylate~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29277 30348 . - . ID=id-GGE_0468-4;Dbxref=InterPro:IPR004668,PFAM:PF03605;Note=dcua_dcub~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29304 29319 . - . ID=id-GGE_0468-5;Note=seg;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29313 29322 . - . ID=id-GGE_0468-6;Note=transmembrane_regions;gbkey=misc_feature;gene=dcuB;locus_tag=GGE_0468 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29289 29958 . + . ID=id-AFQR01000008.1:29289..29958;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29295 30060 . + . ID=id-AFQR01000008.1:29295..30060;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29301 29685 . + . ID=id-AFQR01000008.1:29301..29685;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29307 30048 . + . ID=id-AFQR01000008.1:29307..30048;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29307 29412 . + . ID=id-AFQR01000008.1:29307..29412;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29313 29766 . + . ID=id-AFQR01000008.1:29313..29766;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 30504 . + . ID=id-AFQR01000008.1:29322..30504;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 30333 . + . ID=id-AFQR01000008.1:29322..30333;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 30246 . + . ID=id-AFQR01000008.1:29322..30246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 30135 . + . ID=id-AFQR01000008.1:29322..30135;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 29952 . + . ID=id-AFQR01000008.1:29322..29952;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 29670 . + . ID=id-AFQR01000008.1:29322..29670;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 29544 . + . ID=id-AFQR01000008.1:29322..29544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 29322 29418 . + . ID=id-AFQR01000008.1:29322..29418;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30686 30695 . + . ID=id-AFQR01000008.1:30686..30695;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30704 30713 . - . ID=id-AFQR01000008.1:30704..30713;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 30733 31782 . - . ID=gene-GGE_0469;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank CDS 30733 31782 . - 0 ID=cds-EGT82821.1;Parent=gene-GGE_0469;Dbxref=GeneID:1168528,InterPro:IPR004550,InterPro:IPR006034,InterPro:IPR020827,PFAM:PF00710,TIGRFAM:TIGR00520,NCBI_GP:EGT82821.1;Name=EGT82821.1;Ontology_term=GO:0006528,GO:0006520,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||;go_process=asparagine metabolic process|0006528||,cellular amino acid metabolic process|0006520||;locus_tag=GGE_0469;product=Putative L-asparaginase periplasmic;protein_id=EGT82821.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30733 31780 . - . ID=id-GGE_0469;Dbxref=InterPro:IPR004550,TIGRFAM:TIGR00520;Note=asnase_ii: l-asparaginases%2C type ii~l-asparaginase%2C type ii;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30781 31729 . - . ID=id-GGE_0469-2;Dbxref=InterPro:IPR006034;Note=HMMPanther:PTHR11707:SF4~l-asparaginase ii~HMMPanther:PTHR11707~family not named~asparaginase/glutaminase;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30802 31366 . - . ID=id-GGE_0469-3;Note=Gene3D:3.40.50.1170;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30805 31711 . - . ID=id-GGE_0469-4;Dbxref=InterPro:IPR006034;Note=superfamily:SSF53774~glutaminase/asparaginase~asparaginase/glutaminase;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30808 31699 . - . ID=id-GGE_0469-5;Note=specific~superfamily%3B label: Asparaginase;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30811 31684 . - . ID=id-GGE_0469-6;Dbxref=InterPro:IPR006034,PFAM:PF00710;Note=asparaginase~asparaginase/glutaminase;gbkey=misc_feature;gene=ansB;locus_tag=GGE_0469 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30760 30820 . + . ID=id-AFQR01000008.1:30760..30820;Dbxref=InterPro:IPR020827;Note=PatternScan:PS00144~asn_gln_ase_1~asparaginase/glutaminase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30766 31048 . + . ID=id-AFQR01000008.1:30766..31048;Dbxref=InterPro:IPR020827;Note=PatternScan:PS00917~asn_gln_ase_2~asparaginase/glutaminase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30769 30814 . + . ID=id-AFQR01000008.1:30769..30814;Dbxref=InterPro:IPR006034;Note=FPrintScan:PR00139~asnglnase~asparaginase/glutaminase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30790 31582 . + . ID=id-AFQR01000008.1:30790..31582;Dbxref=InterPro:IPR006034;Note=FPrintScan:PR00139~asnglnase~asparaginase/glutaminase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 30790 31045 . + . ID=id-AFQR01000008.1:30790..31045;Dbxref=InterPro:IPR006034;Note=FPrintScan:PR00139~asnglnase~asparaginase/glutaminase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 31069 31441 . + . ID=id-AFQR01000008.1:31069..31441;Note=Gene3D:3.40.50.40;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 32003 32449 . + . ID=gene-GGE_0470;Name=GGE_0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank CDS 32003 32449 . + 0 ID=cds-EGT82822.1;Parent=gene-GGE_0470;Dbxref=InterPro:IPR001763,PFAM:PF00581,NCBI_GP:EGT82822.1;Name=EGT82822.1;Note=HI_0744;gbkey=CDS;locus_tag=GGE_0470;product=putative rhodanese-like protein;protein_id=EGT82822.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32048 32063 . + . ID=id-GGE_0470;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32054 32387 . + . ID=id-GGE_0470-2;Dbxref=InterPro:IPR001763;Note=superfamily:SSF52821~rhodanese/cell cycle control phosphatase~rhodanese-like;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32078 32369 . + . ID=id-GGE_0470-3;Dbxref=InterPro:IPR001763;Note=Gene3D:3.40.250.10~rhodanese-like;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32135 32309 . + . ID=id-GGE_0470-4;Note=HMMPanther:PTHR13253:SF10~subfamily not named~HMMPanther:PTHR13253~family not named;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32141 32282 . + . ID=id-GGE_0470-5;Dbxref=InterPro:IPR001763,PFAM:PF00581;Note=rhodanese~rhodanese-like;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32147 32273 . + . ID=id-GGE_0470-6;Note=specific~superfamily%3B label: RHOD;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32165 32279 . + . ID=id-GGE_0470-7;Dbxref=InterPro:IPR001763;Note=ProfileScan:PS50206~rhodanese_3~rhodanese-like;gbkey=misc_feature;locus_tag=GGE_0470 GCA_000222085.2|AFQR01000008.1 Genbank gene 32463 32972 . + . ID=gene-GGE_0471;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank CDS 32463 32972 . + 0 ID=cds-EGT82823.1;Parent=gene-GGE_0471;Dbxref=GeneID:1173413,InterPro:IPR003708,PFAM:PF02556,TIGRFAM:TIGR00809,NCBI_GP:EGT82823.1;Name=EGT82823.1;Ontology_term=GO:0051262,GO:0015031,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||;go_process=protein tetramerization|0051262||,protein transport|0015031||;locus_tag=GGE_0471;product=Protein-export protein secB;protein_id=EGT82823.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32463 32928 . + . ID=id-GGE_0471;Dbxref=InterPro:IPR003708,PFAM:PF02556;Note=secb~bacterial protein export chaperone secb;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32463 32925 . + . ID=id-GGE_0471-2;Dbxref=InterPro:IPR003708;Note=HAMAP:MF_00821~secb~bacterial protein export chaperone secb;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32478 32904 . + . ID=id-GGE_0471-3;Dbxref=InterPro:IPR003708;Note=superfamily:SSF54611~bacterial protein-export protein secb~bacterial protein export chaperone secb;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32496 32913 . + . ID=id-GGE_0471-4;Dbxref=InterPro:IPR003708;Note=Gene3D:3.10.420.10~bacterial protein export chaperone secb;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32499 32898 . + . ID=id-GGE_0471-5;Dbxref=InterPro:IPR003708,TIGRFAM:TIGR00809;Note=secb: protein-export chaperone secb~bacterial protein export chaperone secb;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32517 32856 . + . ID=id-GGE_0471-6;Note=specific~superfamily%3B label: Translocase_SecB;gbkey=misc_feature;gene=secB;locus_tag=GGE_0471 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32517 32523 . - . ID=id-AFQR01000008.1:32517..32523;Dbxref=InterPro:IPR003708;Note=FPrintScan:PR01594~secbchaprone~bacterial protein export chaperone secb;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32520 32859 . - . ID=id-AFQR01000008.1:32520..32859;Dbxref=InterPro:IPR003708;Note=FPrintScan:PR01594~secbchaprone~bacterial protein export chaperone secb;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32526 32709 . - . ID=id-AFQR01000008.1:32526..32709;Dbxref=InterPro:IPR003708;Note=FPrintScan:PR01594~secbchaprone~bacterial protein export chaperone secb;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 32532 32781 . - . ID=id-AFQR01000008.1:32532..32781;Dbxref=InterPro:IPR003708;Note=FPrintScan:PR01594~secbchaprone~bacterial protein export chaperone secb;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33027 33036 . + . ID=id-AFQR01000008.1:33027..33036;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 33041 33748 . - . ID=gene-GGE_0472;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank CDS 33041 33748 . - 0 ID=cds-EGT82824.1;Parent=gene-GGE_0472;Dbxref=InterPro:IPR005519,InterPro:IPR010025,InterPro:IPR023214,PFAM:PF03767,PIR:PIRSF017818,TIGRFAM:TIGR01672,NCBI_GP:EGT82824.1;Name=EGT82824.1;Ontology_term=GO:0030288,GO:0003993;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=acid phosphatase activity|0003993||;locus_tag=GGE_0472;product=Class B acid phosphatase;protein_id=EGT82824.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33041 33746 . - . ID=id-GGE_0472;Dbxref=InterPro:IPR010025,PIR:PIRSF017818,TIGRFAM:TIGR01672;Note=acid phosphatase%2C class b~had-superfamily phosphatase%2C subfamily iiib%2C apha~apha: had phosphatase%2C family iiib~had-superfamily phosphatase%2C subfamily iiib%2C apha;gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33074 33077 . - . ID=id-GGE_0472-2;Note=seg;gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33110 33680 . - . ID=id-GGE_0472-3;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33122 33668 . - . ID=id-GGE_0472-4;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33125 33665 . - . ID=id-GGE_0472-5;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33188 33551 . - . ID=id-GGE_0472-6;Dbxref=InterPro:IPR005519,PFAM:PF03767;Note=acid_phosphat_b~acid phosphatase (class b);gbkey=misc_feature;gene=aphA;locus_tag=GGE_0472 GCA_000222085.2|AFQR01000008.1 Genbank gene 33966 34493 . + . ID=gene-GGE_0473;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank CDS 33966 34493 . + 0 ID=cds-EGT82825.1;Parent=gene-GGE_0473;Dbxref=GeneID:81336499,InterPro:IPR001353,InterPro:IPR022281,PFAM:PF00227,TIGRFAM:TIGR03692,NCBI_GP:EGT82825.1;Name=EGT82825.1;Ontology_term=GO:0006508,GO:0051603,GO:0009376,GO:0005839,GO:0004298;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||,proteasome core complex|0005839||;go_function=threonine-type endopeptidase activity|0004298||;go_process=proteolysis|0006508||,proteolysis involved in cellular protein catabolic process|0051603||;locus_tag=GGE_0473;product=ATP-dependent protease subunit HslV;protein_id=EGT82825.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33966 34485 . + . ID=id-GGE_0473;Dbxref=InterPro:IPR022281;Note=HMMPanther:PTHR11599:SF38~subfamily not named~HMMPanther:PTHR11599~family not named~HAMAP:MF_00248~hslv~atp-dependent protease%2C hslv subunit;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33972 34485 . + . ID=id-GGE_0473-2;Note=superfamily:SSF56235~n-terminal nucleophile aminohydrolase (ntn hydrolase);gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33972 34482 . + . ID=id-GGE_0473-3;Dbxref=InterPro:IPR022281,TIGRFAM:TIGR03692;Note=Gene3D:3.60.20.10~atp_dep_hslv: atp-dependent protease hsl~atp-dependent protease%2C hslv subunit;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33972 34476 . + . ID=id-GGE_0473-4;Dbxref=InterPro:IPR001353,PFAM:PF00227;Note=proteasome~proteasome%2C subunit alpha/beta;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 33981 34026 . + . ID=id-GGE_0473-5;Note=seg;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34041 34413 . + . ID=id-GGE_0473-6;Note=specific~superfamily%3B label: Ntn_hydrolase superfamily;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34185 34194 . + . ID=id-GGE_0473-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hslV;locus_tag=GGE_0473 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34002 34101 . - . ID=id-AFQR01000008.1:34002..34101;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34026 34080 . - . ID=id-AFQR01000008.1:34026..34080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 34504 35838 . + . ID=gene-GGE_0474;Name=GGE_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank CDS 34504 35838 . + 0 ID=cds-EGT82826.1;Parent=gene-GGE_0474;Dbxref=GeneID:145630324,InterPro:IPR003959,InterPro:IPR004491,InterPro:IPR013093,InterPro:IPR019489,PFAM:PF00004,PFAM:PF07724,PFAM:PF10431,TIGRFAM:TIGR00390,NCBI_GP:EGT82826.1;Name=EGT82826.1;Note=ZP_01786105;Ontology_term=GO:0009376,GO:0005737,GO:0005524,GO:0016887,GO:0070011;gbkey=CDS;go_component=HslUV protease complex|0009376||,cytoplasm|0005737||;go_function=ATP binding|0005524||,ATPase activity|0016887||,peptidase activity acting on L-amino acid peptides|0070011||;locus_tag=GGE_0474;product=ATP-dependent protease ATP-binding subunit;protein_id=EGT82826.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34504 35836 . + . ID=id-GGE_0474;Dbxref=InterPro:IPR004491;Note=multi-dom~HMMPanther:PTHR11262:SF3~atp-dependent hsl protease atp-binding subunit hslu~heat shock protein hslu~HMMPanther:PTHR11262~family not named~HAMAP:MF_00249~hslu~heat shock protein hslu%3B label: hslU;gbkey=misc_feature;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34510 35833 . + . ID=id-GGE_0474-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34516 35827 . + . ID=id-GGE_0474-3;Dbxref=InterPro:IPR004491,TIGRFAM:TIGR00390;Note=hslu: atp-dependent protease hslvu%2C atpase s~heat shock protein hslu;gbkey=misc_feature;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34558 34762 . + . ID=id-GGE_0474-4;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34663 34759 . + . ID=id-GGE_0474-5;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature;locus_tag=GGE_0474 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34534 35137 . - . ID=id-AFQR01000008.1:34534..35137;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34555 34864 . - . ID=id-AFQR01000008.1:34555..34864;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34600 35143 . - . ID=id-AFQR01000008.1:34600..35143;Note=Gene3D:1.10.8.10;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34717 35512 . - . ID=id-AFQR01000008.1:34717..35512;Dbxref=InterPro:IPR019489,PFAM:PF10431;Note=clpb_d2-small~clp atpase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34792 35239 . - . ID=id-AFQR01000008.1:34792..35239;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34801 35200 . - . ID=id-AFQR01000008.1:34801..35200;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34813 35527 . - . ID=id-AFQR01000008.1:34813..35527;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 34933 35068 . - . ID=id-AFQR01000008.1:34933..35068;Dbxref=InterPro:IPR013093,PFAM:PF07724;Note=aaa_2~atpase%2C aaa-2;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36039 36048 . - . ID=id-AFQR01000008.1:36039..36048;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 36067 36741 . - . ID=gene-GGE_0475;Name=GGE_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank CDS 36067 36741 . - 0 ID=cds-EGT82827.1;Parent=gene-GGE_0475;Dbxref=GeneID:81336428,InterPro:IPR000150,InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006346,InterPro:IPR006402,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,PFAM:PF00702,TIGRFAM:TIGR01449,TIGRFAM:TIGR01509,TIGRFAM:TIGR01549,NCBI_GP:EGT82827.1;Name=EGT82827.1;Note=NTHI0697;Ontology_term=GO:0008152,GO:0003824,GO:0016787,GO:0008967;gbkey=CDS;go_function=catalytic activity|0003824||,hydrolase activity|0016787||,phosphoglycolate phosphatase activity|0008967||;go_process=metabolic process|0008152||;locus_tag=GGE_0475;product=Phosphoglycolate phosphatase;protein_id=EGT82827.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36067 36727 . - . ID=id-GGE_0475;Note=HMMPanther:PTHR18901~family not named;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36076 36733 . - . ID=id-GGE_0475-2;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36082 36727 . - . ID=id-GGE_0475-3;Dbxref=InterPro:IPR006346;Note=HAMAP:MF_00495~gph_hydrolase_bact~2-phosphoglycolate phosphatase%2C prokaryotic;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36082 36622 . - . ID=id-GGE_0475-4;Note=multi-dom%3B label: Hydrolase;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36082 36103 . - . ID=id-GGE_0475-5;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36085 36619 . - . ID=id-GGE_0475-6;Dbxref=InterPro:IPR005834,PFAM:PF00702;Note=hydrolase~haloacid dehalogenase-like hydrolase;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36088 36634 . - . ID=id-GGE_0475-7;Dbxref=InterPro:IPR006402,TIGRFAM:TIGR01509;Note=had-sf-ia-v3: had hydrolase%2C family ia%2C~had-superfamily hydrolase%2C subfamily ia%2C variant 3;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36088 36103 . - . ID=id-GGE_0475-8;Dbxref=InterPro:IPR000150;Note=PatternScan:PS01228~cof_1~cof protein;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36091 36718 . - . ID=id-GGE_0475-9;Dbxref=InterPro:IPR006346,TIGRFAM:TIGR01449;Note=pgp_bact: phosphoglycolate phosphatase%2C~2-phosphoglycolate phosphatase%2C prokaryotic;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36097 36454 . - . ID=id-GGE_0475-10;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36127 36247 . - . ID=id-GGE_0475-11;Dbxref=InterPro:IPR023198;Note=Gene3D:1.10.150.240~phosphoglycolate phosphatase%2C domain 2;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36196 36508 . - . ID=id-GGE_0475-12;Dbxref=InterPro:IPR006439,TIGRFAM:TIGR01549;Note=had-sf-ia-v1: had hydrolase%2C family ia%2C~had-superfamily hydrolase%2C subfamily ia%2C variant 1;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36307 36502 . - . ID=id-GGE_0475-13;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36352 36367 . - . ID=id-GGE_0475-14;Note=specific~superfamily%3B label: HAD_like;gbkey=misc_feature;locus_tag=GGE_0475 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36109 36391 . + . ID=id-AFQR01000008.1:36109..36391;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36118 36484 . + . ID=id-AFQR01000008.1:36118..36484;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36130 36538 . + . ID=id-AFQR01000008.1:36130..36538;Dbxref=InterPro:IPR005833;Note=FPrintScan:PR00413~hadhalognase~haloacid dehydrogenase/epoxide hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 36787 37461 . - . ID=gene-GGE_0476;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank CDS 36787 37461 . - 0 ID=cds-EGT82828.1;Parent=gene-GGE_0476;Dbxref=GeneID:1169388,InterPro:IPR000056,InterPro:IPR011060,InterPro:IPR013785,PFAM:PF00834,TIGRFAM:TIGR01163,NCBI_GP:EGT82828.1;Name=EGT82828.1;Ontology_term=GO:0005975,GO:0008152,GO:0003824,GO:0004750;gbkey=CDS;gene=rpe;go_function=catalytic activity|0003824||,ribulose-phosphate 3-epimerase activity|0004750||;go_process=carbohydrate metabolic process|0005975||,metabolic process|0008152||;locus_tag=GGE_0476;product=Ribulose-phosphate 3-epimerase;protein_id=EGT82828.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36787 37438 . - . ID=id-GGE_0476;Dbxref=InterPro:IPR000056,InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel~HMMPanther:PTHR11749~family not named~ribulose-phosphate 3-epimerase;gbkey=misc_feature;gene=rpe;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36793 37447 . - . ID=id-GGE_0476-2;Dbxref=InterPro:IPR011060;Note=superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel;gbkey=misc_feature;gene=rpe;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36802 37423 . - . ID=id-GGE_0476-3;Dbxref=InterPro:IPR000056,TIGRFAM:TIGR01163;Note=specific~superfamily~rpe: ribulose-phosphate 3-epimerase~ribulose-phosphate 3-epimerase%3B label: RPE;gbkey=misc_feature;gene=rpe;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36805 37420 . - . ID=id-GGE_0476-4;Note=multi-dom%3B label: rpe;gbkey=misc_feature;gene=rpe;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36805 37387 . - . ID=id-GGE_0476-5;Dbxref=InterPro:IPR000056,PFAM:PF00834;Note=ribul_p_3_epim~ribulose-phosphate 3-epimerase;gbkey=misc_feature;gene=rpe;locus_tag=GGE_0476 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36832 36886 . + . ID=id-AFQR01000008.1:36832..36886;Dbxref=InterPro:IPR000056;Note=PatternScan:PS01085~ribul_p_3_epimer_1~ribulose-phosphate 3-epimerase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36844 37156 . + . ID=id-AFQR01000008.1:36844..37156;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 36856 37195 . + . ID=id-AFQR01000008.1:36856..37195;Dbxref=InterPro:IPR000056;Note=PatternScan:PS01086~ribul_p_3_epimer_2~ribulose-phosphate 3-epimerase;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 37609 38964 . - . ID=gene-GGE_0477;Name=GGE_0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank CDS 37609 38964 . - 0 ID=cds-EGT82829.1;Parent=gene-GGE_0477;Dbxref=InterPro:IPR000565,InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,InterPro:IPR014721,InterPro:IPR018522,InterPro:IPR020568,PFAM:PF00204,PFAM:PF00986,NCBI_GP:EGT82829.1;Name=EGT82829.1;Note=Hypothetical dNA topoisomerase%2C type IIA%2C conserved site;Ontology_term=GO:0006265,GO:0005694,GO:0005524,GO:0003677,GO:0003918;gbkey=CDS;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||;go_process=DNA topological change|0006265||;locus_tag=GGE_0477;product=putative dNA topoisomerase%2C type IIA%2C conserved site;protein_id=EGT82829.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37609 38962 . - . ID=id-GGE_0477;Note=multi-dom~HMMPanther:PTHR10169:SF20~dna gyrase subunit b~HMMPanther:PTHR10169~dna topoisomerase/gyrase%3B label: gyrB;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37609 37729 . - . ID=id-GGE_0477-2;Dbxref=InterPro:IPR014721,InterPro:IPR020568;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup~superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37615 37723 . - . ID=id-GGE_0477-3;Dbxref=InterPro:IPR013506,PFAM:PF00204;Note=dna_gyraseb~dna topoisomerase%2C type iia%2C subunit b%2C domain 2;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37633 37654 . - . ID=id-GGE_0477-4;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37735 38809 . - . ID=id-GGE_0477-5;Dbxref=InterPro:IPR013760;Note=superfamily:SSF56719~type ii dna topoisomerase~dna topoisomerase%2C type iia%2C central;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37807 37954 . - . ID=id-GGE_0477-6;Note=specific~superfamily%3B label: TOPRIM superfamily;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38143 38152 . - . ID=id-GGE_0477-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0477 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37636 37819 . + . ID=id-AFQR01000008.1:37636..37819;Dbxref=InterPro:IPR018522;Note=PatternScan:PS00177~topoisomerase_ii~dna topoisomerase%2C type iia%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37639 37963 . + . ID=id-AFQR01000008.1:37639..37963;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37648 38824 . + . ID=id-AFQR01000008.1:37648..38824;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37648 38128 . + . ID=id-AFQR01000008.1:37648..38128;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37654 37813 . + . ID=id-AFQR01000008.1:37654..37813;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37660 38872 . + . ID=id-AFQR01000008.1:37660..38872;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37660 38761 . + . ID=id-AFQR01000008.1:37660..38761;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37660 38014 . + . ID=id-AFQR01000008.1:37660..38014;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37663 38068 . + . ID=id-AFQR01000008.1:37663..38068;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37666 37684 . + . ID=id-AFQR01000008.1:37666..37684;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37672 37675 . + . ID=id-AFQR01000008.1:37672..37675;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37777 38722 . + . ID=id-AFQR01000008.1:37777..38722;Dbxref=InterPro:IPR013759;Note=Gene3D:3.40.50.670~dna topoisomerase%2C type iia%2C subunit b/n-terminal%2C alpha-beta;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37801 38743 . + . ID=id-AFQR01000008.1:37801..38743;Dbxref=InterPro:IPR002288,PFAM:PF00986;Note=dna_gyraseb_c~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 37804 38740 . + . ID=id-AFQR01000008.1:37804..38740;Note=superfamily%3B label: DNA_gyraseB_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 38957 40030 . - . ID=gene-GGE_0478;Name=GGE_0478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank CDS 38957 40030 . - 0 ID=cds-EGT82830.1;Parent=gene-GGE_0478;Dbxref=InterPro:IPR000565,InterPro:IPR001241,InterPro:IPR003594,InterPro:IPR013506,InterPro:IPR014721,InterPro:IPR020568,PFAM:PF00204,PFAM:PF02518,NCBI_GP:EGT82830.1;Name=EGT82830.1;Note=Hypothetical aTPase-like%2C ATP-binding domain;Ontology_term=GO:0006265,GO:0005694,GO:0005524,GO:0003677,GO:0003918;gbkey=CDS;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA topoisomerase (ATP-hydrolyzing) activity|0003918||;go_process=DNA topological change|0006265||;locus_tag=GGE_0478;product=putative aTPase-like%2C ATP-binding domain-containing protein;protein_id=EGT82830.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38957 40004 . - . ID=id-GGE_0478;Note=HMMPanther:PTHR10169:SF20~dna gyrase subunit b~HMMPanther:PTHR10169~dna topoisomerase/gyrase;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38974 38983 . - . ID=id-GGE_0478-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38978 39602 . - . ID=id-GGE_0478-3;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38981 39602 . - . ID=id-GGE_0478-4;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38984 38990 . - . ID=id-GGE_0478-5;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39065 39377 . - . ID=id-GGE_0478-6;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=superfamily~hatpase_c~atpase-like%2C atp-binding domain%3B label: HATPase_c superfamily;gbkey=misc_feature;locus_tag=GGE_0478 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38996 39302 . + . ID=id-AFQR01000008.1:38996..39302;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38999 39770 . + . ID=id-AFQR01000008.1:38999..39770;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38999 39554 . + . ID=id-AFQR01000008.1:38999..39554;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 38999 39179 . + . ID=id-AFQR01000008.1:38999..39179;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39002 39308 . + . ID=id-AFQR01000008.1:39002..39308;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39005 39509 . + . ID=id-AFQR01000008.1:39005..39509;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39005 39074 . + . ID=id-AFQR01000008.1:39005..39074;Dbxref=InterPro:IPR001241;Note=FPrintScan:PR00418~tpi2family~dna topoisomerase%2C type iia%2C subunit b/n-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39008 39902 . + . ID=id-AFQR01000008.1:39008..39902;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39026 39626 . + . ID=id-AFQR01000008.1:39026..39626;Dbxref=InterPro:IPR000565;Note=FPrintScan:PR01159~dnagyraseb~dna topoisomerase%2C type iia%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39338 39629 . + . ID=id-AFQR01000008.1:39338..39629;Dbxref=InterPro:IPR013506,PFAM:PF00204;Note=dna_gyraseb~dna topoisomerase%2C type iia%2C subunit b%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39341 39626 . + . ID=id-AFQR01000008.1:39341..39626;Dbxref=InterPro:IPR014721;Note=specific~superfamily~Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup%3B label: TopoII_MutL_Trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 39347 39617 . + . ID=id-AFQR01000008.1:39347..39617;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 40156 42468 . - . ID=gene-GGE_0479;Name=GGE_0479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank CDS 40156 42468 . - 0 ID=cds-EGT82831.1;Parent=gene-GGE_0479;Dbxref=GeneID:2501167,InterPro:IPR003029,InterPro:IPR006641,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018974,InterPro:IPR023097,InterPro:IPR023319,InterPro:IPR023323,PFAM:PF00575,PFAM:PF09371,NCBI_GP:EGT82831.1;Name=EGT82831.1;Note=HI_0568;Ontology_term=GO:0006139,GO:0003723,GO:0016788;gbkey=CDS;go_function=RNA binding|0003723||,hydrolase activity acting on ester bonds|0016788||;go_process=nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||;locus_tag=GGE_0479;product=putative nucleic acid-binding%2C OB-fold-like protein;protein_id=EGT82831.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40156 42460 . - . ID=id-GGE_0479;Note=multi-dom%3B label: Tex;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40165 42319 . - . ID=id-GGE_0479-2;Note=HMMPanther:PTHR10724~s1 rna-binding domain-containing protein 1;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40165 40480 . - . ID=id-GGE_0479-3;Dbxref=InterPro:IPR023319;Note=Gene3D:1.10.10.650~tex-like protein%2C hth domain;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40186 40735 . - . ID=id-GGE_0479-4;Note=superfamily%3B label: Tex_N superfamily;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40186 40732 . - . ID=id-GGE_0479-5;Dbxref=InterPro:IPR018974,PFAM:PF09371;Note=tex_n~tex-like protein;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40291 40300 . - . ID=id-GGE_0479-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0479 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40192 40213 . + . ID=id-AFQR01000008.1:40192..40213;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40261 40270 . + . ID=id-AFQR01000008.1:40261..40270;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40297 41512 . + . ID=id-AFQR01000008.1:40297..41512;Dbxref=InterPro:IPR023323;Note=Gene3D:1.10.3500.10~tex-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40360 42109 . + . ID=id-AFQR01000008.1:40360..42109;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40366 42109 . + . ID=id-AFQR01000008.1:40366..42109;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40375 42100 . + . ID=id-AFQR01000008.1:40375..42100;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40420 42055 . + . ID=id-AFQR01000008.1:40420..42055;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40444 41143 . + . ID=id-AFQR01000008.1:40444..41143;Note=superfamily%3B label: UPF0081 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40447 42046 . + . ID=id-AFQR01000008.1:40447..42046;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40531 41137 . + . ID=id-AFQR01000008.1:40531..41137;Dbxref=InterPro:IPR006641;Note=Gene3D:3.30.420.140~yqgf/rnase h-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 40552 41653 . + . ID=id-AFQR01000008.1:40552..41653;Dbxref=InterPro:IPR023097;Note=Gene3D:1.10.150.310~tex ruvx-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 41513 41522 . + . ID=id-AFQR01000008.1:41513..41522;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42038 42047 . + . ID=id-AFQR01000008.1:42038..42047;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 42576 43052 . + . ID=gene-GGE_0480;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank CDS 42576 43052 . + 0 ID=cds-EGT82832.1;Parent=gene-GGE_0480;Dbxref=GeneID:1170017,InterPro:IPR001437,InterPro:IPR006358,InterPro:IPR018151,InterPro:IPR022691,InterPro:IPR023459,PFAM:PF01272,PFAM:PF03449,TIGRFAM:TIGR01461,NCBI_GP:EGT82832.1;Name=EGT82832.1;Ontology_term=GO:0006355,GO:0003677,GO:0003711;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||,transcription elongation regulator activity|0003711||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0480;product=Transcription elongation factor greB;protein_id=EGT82832.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42576 43047 . + . ID=id-GGE_0480;Note=multi-dom%3B label: greB;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42582 43041 . + . ID=id-GGE_0480-2;Dbxref=InterPro:IPR023459;Note=HAMAP:MF_00105~grea_greb~transcription elongation factor grea/greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42582 42798 . + . ID=id-GGE_0480-3;Dbxref=InterPro:IPR022691,PFAM:PF03449;Note=grea_greb_n~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42585 43044 . + . ID=id-GGE_0480-4;Dbxref=InterPro:IPR006358,TIGRFAM:TIGR01461;Note=greb: transcription elongation factor greb~transcription elongation factor greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42585 42810 . + . ID=id-GGE_0480-5;Dbxref=InterPro:IPR022691;Note=superfamily:SSF46557~grea transcript cleavage protein domain~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42585 42798 . + . ID=id-GGE_0480-6;Dbxref=InterPro:IPR022691;Note=Gene3D:1.10.287.180~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42591 42789 . + . ID=id-GGE_0480-7;Note=superfamily%3B label: GreA_GreB_N superfamily;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42630 42672 . + . ID=id-GGE_0480-8;Dbxref=InterPro:IPR018151;Note=PatternScan:PS00829~greab_1~transcription elongation factor%2C grea/greb%2C conserved site;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42807 42816 . + . ID=id-GGE_0480-9;Dbxref=InterPro:IPR001437;Note=Gene3D:3.10.50.30~transcription elongation factor%2C grea/greb;gbkey=misc_feature;gene=greB;locus_tag=GGE_0480 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42627 42936 . - . ID=id-AFQR01000008.1:42627..42936;Dbxref=InterPro:IPR018151;Note=PatternScan:PS00830~greab_2~transcription elongation factor%2C grea/greb%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42801 42822 . - . ID=id-AFQR01000008.1:42801..42822;Dbxref=InterPro:IPR001437,PFAM:PF01272;Note=grea_greb~transcription elongation factor%2C grea/greb;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42804 42819 . - . ID=id-AFQR01000008.1:42804..42819;Note=superfamily%3B label: GreA_GreB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 42810 42816 . - . ID=id-AFQR01000008.1:42810..42816;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 43122 43739 . - . ID=gene-GGE_0481;Name=GGE_0481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank CDS 43122 43739 . - 0 ID=cds-EGT82833.1;Parent=gene-GGE_0481;Dbxref=GeneID:1176332,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR015893,PFAM:PF00440,NCBI_GP:EGT82833.1;Name=EGT82833.1;Note=HI_0570;Ontology_term=GO:0016481,GO:0006355,GO:0005515,GO:0003700,GO:0016566;gbkey=CDS;go_function=protein binding|0005515||,sequence-specific DNA binding transcription factor activity|0003700||,specific transcriptional repressor activity|0016566||;go_process=negative regulation of transcription|0016481||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0481;product=putative transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal;protein_id=EGT82833.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43122 43707 . - . ID=id-GGE_0481;Note=multi-dom%3B label: PRK11202;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43122 43698 . - . ID=id-GGE_0481-2;Dbxref=InterPro:IPR015893;Note=Gene3D:1.10.357.10~tetracycline transcriptional regulator%2C tetr-like;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43152 43326 . - . ID=id-GGE_0481-3;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43155 43305 . - . ID=id-GGE_0481-4;Dbxref=InterPro:IPR001647;Note=ProfileScan:PS50977~hth_tetr_2~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43170 43266 . - . ID=id-GGE_0481-5;Dbxref=InterPro:IPR001647,PFAM:PF00440;Note=superfamily~tetr_n~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal%3B label: TetR_N superfamily;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43209 43215 . - . ID=id-GGE_0481-6;Dbxref=InterPro:IPR001647;Note=PatternScan:PS01081~hth_tetr_1~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_0481 GCA_000222085.2|AFQR01000008.1 Genbank gene 43739 44644 . - . ID=gene-GGE_0482;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank CDS 43739 44644 . - 0 ID=cds-EGT82834.1;Parent=gene-GGE_0482;Dbxref=GeneID:1171941,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT82834.1;Name=EGT82834.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0482;product=putative oxidative stress regulatory protein;protein_id=EGT82834.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43739 44633 . - . ID=id-GGE_0482;Note=multi-dom%3B label: PRK11151;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43739 44558 . - . ID=id-GGE_0482-2;Note=HMMPanther:PTHR11439:SF73~probable transcriptional regulator~HMMPanther:PTHR11439~family not named;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43739 44075 . - . ID=id-GGE_0482-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43739 43991 . - . ID=id-GGE_0482-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43739 43913 . - . ID=id-GGE_0482-5;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43748 43916 . - . ID=id-GGE_0482-6;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43994 44369 . - . ID=id-GGE_0482-7;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44003 44351 . - . ID=id-GGE_0482-8;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44003 44015 . - . ID=id-GGE_0482-9;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44012 44336 . - . ID=id-GGE_0482-10;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;gene=oxyR;locus_tag=GGE_0482 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43772 43826 . + . ID=id-AFQR01000008.1:43772..43826;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43775 43856 . + . ID=id-AFQR01000008.1:43775..43856;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 43775 43793 . + . ID=id-AFQR01000008.1:43775..43793;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44003 44279 . + . ID=id-AFQR01000008.1:44003..44279;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 44767 45492 . + . ID=gene-GGE_0483;Name=GGE_0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank CDS 44767 45492 . + 0 ID=cds-EGT82835.1;Parent=gene-GGE_0483;Dbxref=GeneID:1723174,InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011906,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR014025,PFAM:PF00462,PFAM:PF08534,TIGRFAM:TIGR02190,NCBI_GP:EGT82835.1;Name=EGT82835.1;Note=HI_0572;Ontology_term=GO:0045454,GO:0009055,GO:0016491,GO:0015035;gbkey=CDS;go_function=electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||;locus_tag=GGE_0483;product=Hybrid peroxiredoxin hyPrx5;protein_id=EGT82835.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44767 45490 . + . ID=id-GGE_0483;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44788 45235 . + . ID=id-GGE_0483-2;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44788 45229 . + . ID=id-GGE_0483-3;Note=specific~superfamily%3B label: PRX5_like;gbkey=misc_feature;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44788 45226 . + . ID=id-GGE_0483-4;Dbxref=InterPro:IPR013740,PFAM:PF08534;Note=redoxin~redoxin;gbkey=misc_feature;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44842 45175 . + . ID=id-GGE_0483-5;Note=HMMPanther:PTHR10430~peroxiredoxin;gbkey=misc_feature;locus_tag=GGE_0483 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44809 45448 . - . ID=id-AFQR01000008.1:44809..45448;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44809 45406 . - . ID=id-AFQR01000008.1:44809..45406;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44818 45289 . - . ID=id-AFQR01000008.1:44818..45289;Dbxref=InterPro:IPR011767;Note=PatternScan:PS00195~glutaredoxin_1~glutaredoxin active site;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44824 45283 . - . ID=id-AFQR01000008.1:44824..45283;Dbxref=InterPro:IPR014025;Note=FPrintScan:PR00160~glutaredoxin~glutaredoxin subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44941 45286 . - . ID=id-AFQR01000008.1:44941..45286;Dbxref=InterPro:IPR002109,PFAM:PF00462;Note=glutaredoxin~glutaredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44977 45280 . - . ID=id-AFQR01000008.1:44977..45280;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 44983 45277 . - . ID=id-AFQR01000008.1:44983..45277;Note=specific~superfamily%3B label: GRX_hybridPRX5;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45004 45256 . - . ID=id-AFQR01000008.1:45004..45256;Dbxref=InterPro:IPR011906,TIGRFAM:TIGR02190;Note=glrx-dom: glutaredoxin-family domain~glutaredoxin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45013 45247 . - . ID=id-AFQR01000008.1:45013..45247;Dbxref=InterPro:IPR002109;Note=ProfileScan:PS51354~glutaredoxin_2~glutaredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 45584 45805 . - . ID=gene-GGE_0484;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=GGE_0484 GCA_000222085.2|AFQR01000008.1 Genbank CDS 45584 45805 . - 0 ID=cds-EGT82836.1;Parent=gene-GGE_0484;Dbxref=GeneID:166219494,InterPro:IPR007236,PFAM:PF04102,NCBI_GP:EGT82836.1;Name=EGT82836.1;gbkey=CDS;gene=slyX;locus_tag=GGE_0484;product=Protein slyX;protein_id=EGT82836.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45584 45803 . - . ID=id-GGE_0484;Note=superfamily%3B label: SlyX superfamily;gbkey=misc_feature;gene=slyX;locus_tag=GGE_0484 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45596 45671 . - . ID=id-GGE_0484-2;Note=coiled-coil;gbkey=misc_feature;gene=slyX;locus_tag=GGE_0484 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45602 45788 . - . ID=id-GGE_0484-3;Dbxref=InterPro:IPR007236,PFAM:PF04102;Note=slyx~slyx~HAMAP:MF_00715~slyx~slyx;gbkey=misc_feature;gene=slyX;locus_tag=GGE_0484 GCA_000222085.2|AFQR01000008.1 Genbank gene 45903 46628 . + . ID=gene-GGE_0485;Name=GGE_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank CDS 45903 46628 . + 0 ID=cds-EGT82837.1;Parent=gene-GGE_0485;Dbxref=GeneID:1169691,InterPro:IPR000774,InterPro:IPR001179,InterPro:IPR023566,PFAM:PF00254,PFAM:PF01346,NCBI_GP:EGT82837.1;Name=EGT82837.1;Note=HI_0574;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||;locus_tag=GGE_0485;product=Putative FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=EGT82837.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45909 46614 . + . ID=id-GGE_0485;Dbxref=InterPro:IPR023566;Note=HMMPanther:PTHR10516~peptidyl-prolyl cis-trans isomerase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45942 46281 . + . ID=id-GGE_0485-2;Note=superfamily%3B label: FKBP_N superfamily;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45945 46278 . + . ID=id-GGE_0485-3;Dbxref=InterPro:IPR000774,PFAM:PF01346;Note=fkbp_n~peptidyl-prolyl cis-trans isomerase%2C fkbp-type;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45984 46533 . + . ID=id-GGE_0485-4;Note=multi-dom%3B label: FkpA;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45990 46533 . + . ID=id-GGE_0485-5;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45993 46170 . + . ID=id-GGE_0485-6;Dbxref=InterPro:IPR000774;Note=Gene3D:1.10.287.460~peptidyl-prolyl cis-trans isomerase%2C fkbp-type;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46260 46260 . + . ID=id-GGE_0485-7;Note=Gene3D:3.10.50.40;gbkey=misc_feature;locus_tag=GGE_0485 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45954 46194 . - . ID=id-AFQR01000008.1:45954..46194;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 45969 46203 . - . ID=id-AFQR01000008.1:45969..46203;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46164 46353 . - . ID=id-AFQR01000008.1:46164..46353;Dbxref=InterPro:IPR001179;Note=ProfileScan:PS50059~fkbp_ppiase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46179 46329 . - . ID=id-AFQR01000008.1:46179..46329;Dbxref=InterPro:IPR001179,PFAM:PF00254;Note=superfamily~fkbp_c~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain%3B label: FKBP_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46694 46703 . - . ID=id-AFQR01000008.1:46694..46703;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000008.1 Genbank gene 46717 47382 . + . ID=gene-GGE_0486;Name=GGE_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0486 GCA_000222085.2|AFQR01000008.1 Genbank CDS 46717 47382 . + 0 ID=cds-EGT82838.1;Parent=gene-GGE_0486;Dbxref=GeneID:1176237,InterPro:IPR013559,PFAM:PF08348,NCBI_GP:EGT82838.1;Name=EGT82838.1;Note=HI_0575;gbkey=CDS;locus_tag=GGE_0486;product=putative yheO-like protein;protein_id=EGT82838.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46738 47362 . + . ID=id-GGE_0486;Note=multi-dom%3B label: COG2964;gbkey=misc_feature;locus_tag=GGE_0486 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46765 47059 . + . ID=id-GGE_0486-2;Dbxref=InterPro:IPR013559,PFAM:PF08348;Note=superfamily~pas_6~yheo-like%3B label: PAS_6 superfamily;gbkey=misc_feature;locus_tag=GGE_0486 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 46765 47029 . + . ID=id-GGE_0486-3;Dbxref=InterPro:IPR013559;Note=BlastProDom:PD037769~q4qmx0_haei8_q4qmx0~yheo-like;gbkey=misc_feature;locus_tag=GGE_0486 GCA_000222085.2|AFQR01000008.1 Genbank gene 47382 47762 . + . ID=gene-GGE_0487;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=GGE_0487 GCA_000222085.2|AFQR01000008.1 Genbank CDS 47382 47762 . + 0 ID=cds-EGT82839.1;Parent=gene-GGE_0487;Dbxref=GeneID:1176235,InterPro:IPR003787,InterPro:IPR017463,PFAM:PF02635,TIGRFAM:TIGR03012,NCBI_GP:EGT82839.1;Name=EGT82839.1;Ontology_term=GO:0008033,GO:0005737,GO:0016783;gbkey=CDS;gene=tusD;go_component=cytoplasm|0005737||;go_function=sulfurtransferase activity|0016783||;go_process=tRNA processing|0008033||;locus_tag=GGE_0487;product=Sulfurtransferase tusD;protein_id=EGT82839.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 47382 47760 . + . ID=id-GGE_0487;Note=superfamily:SSF75169~dsrefh-like;gbkey=misc_feature;gene=tusD;locus_tag=GGE_0487 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 47382 47754 . + . ID=id-GGE_0487-2;Dbxref=InterPro:IPR003787,PFAM:PF02635;Note=superfamily~Gene3D:3.40.1260.10~drse~sulphur relay%2C dsre/f-like protein%3B label: DrsE superfamily;gbkey=misc_feature;gene=tusD;locus_tag=GGE_0487 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 47388 47757 . + . ID=id-GGE_0487-3;Dbxref=InterPro:IPR017463,TIGRFAM:TIGR03012;Note=sulf_tusd_dsre: sulfur relay protein t~sulphur relay%2C tusd/dsre;gbkey=misc_feature;gene=tusD;locus_tag=GGE_0487 GCA_000222085.2|AFQR01000008.1 Genbank gene 47759 48118 . + . ID=gene-GGE_0488;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=GGE_0488 GCA_000222085.2|AFQR01000008.1 Genbank CDS 47759 48118 . + 0 ID=cds-EGT82840.1;Parent=gene-GGE_0488;Dbxref=InterPro:IPR003787,InterPro:IPR017462,PFAM:PF02635,TIGRFAM:TIGR03010,NCBI_GP:EGT82840.1;Name=EGT82840.1;gbkey=CDS;gene=tusC;locus_tag=GGE_0488;product=Protein tusC;protein_id=EGT82840.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 47759 48116 . + . ID=id-GGE_0488;Dbxref=InterPro:IPR003787,PFAM:PF02635;Note=superfamily~Gene3D:3.40.1260.10~drse~sulphur relay%2C dsre/f-like protein~superfamily:SSF75169~dsrefh-like%3B label: DrsE superfamily;gbkey=misc_feature;gene=tusC;locus_tag=GGE_0488 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 47765 48113 . + . ID=id-GGE_0488-2;Dbxref=InterPro:IPR017462,TIGRFAM:TIGR03010;Note=sulf_tusc_dsrf: sulfur relay protein t~sulphur relay%2C tusc/dsrf;gbkey=misc_feature;gene=tusC;locus_tag=GGE_0488 GCA_000222085.2|AFQR01000008.1 Genbank gene 48127 48414 . + . ID=gene-GGE_0489;Name=GGE_0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0489 GCA_000222085.2|AFQR01000008.1 Genbank CDS 48127 48414 . + 0 ID=cds-EGT82841.1;Parent=gene-GGE_0489;Dbxref=GeneID:1175264,InterPro:IPR007215,PFAM:PF04077,NCBI_GP:EGT82841.1;Name=EGT82841.1;Note=HI_0577;Ontology_term=GO:0002143,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||;go_process=tRNA wobble position uridine thiolation|0002143||;locus_tag=GGE_0489;product=putative dsrEFH-like protein;protein_id=EGT82841.1;transl_table=11 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 48127 48412 . + . ID=id-GGE_0489;Note=superfamily~superfamily:SSF75169~dsrefh-like%3B label: DsrH superfamily;gbkey=misc_feature;locus_tag=GGE_0489 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 48127 48403 . + . ID=id-GGE_0489-2;Note=Gene3D:3.40.1260.10;gbkey=misc_feature;locus_tag=GGE_0489 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 48151 48376 . + . ID=id-GGE_0489-3;Dbxref=InterPro:IPR007215,PFAM:PF04077;Note=dsrh~sulphur relay%2C tusb/dsrh;gbkey=misc_feature;locus_tag=GGE_0489 GCA_000222085.2|AFQR01000008.1 Genbank sequence_feature 48318 48327 . - . ID=id-AFQR01000008.1:48318..48327;Note=Haemophilus USS 10bp intact;gbkey=misc_feature ##sequence-region AFQR01000007.1 1 182798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000007.1 Genbank region 1 182798 . + . ID=AFQR01000007.1:1..182798;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000007.1 Genbank gene 20 775 . - . ID=gene-GGE_0269;Name=GGE_0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank CDS 20 775 . - 0 ID=cds-EGT82906.1;Parent=gene-GGE_0269;Dbxref=GeneID:2495672,InterPro:IPR013216,PFAM:PF08241,NCBI_GP:EGT82906.1;Name=EGT82906.1;Note=HI_0095;Ontology_term=GO:0008152,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||;go_process=metabolic process|0008152||;locus_tag=GGE_0269;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT82906.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 74 542 . - . ID=id-GGE_0269;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83 671 . - . ID=id-GGE_0269-2;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104 506 . - . ID=id-GGE_0269-3;Note=HMMPanther:PTHR10108~family not named;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128 656 . - . ID=id-GGE_0269-4;Note=multi-dom%3B label: SmtA;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143 338 . - . ID=id-GGE_0269-5;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149 320 . - . ID=id-GGE_0269-6;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature;locus_tag=GGE_0269 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 86 227 . + . ID=id-AFQR01000007.1:86..227;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 894 903 . - . ID=id-AFQR01000007.1:894..903;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 908 2053 . - . ID=gene-GGE_0270;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank CDS 908 2053 . - 0 ID=cds-EGT82907.1;Parent=gene-GGE_0270;Dbxref=GeneID:1171640,InterPro:IPR003764,InterPro:IPR006680,InterPro:IPR011059,PFAM:PF01979,TIGRFAM:TIGR00221,NCBI_GP:EGT82907.1;Name=EGT82907.1;Ontology_term=GO:0006044,GO:0008448,GO:0016810,GO:0016787;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||,hydrolase activity acting on carbon-nitrogen (but not peptide) bonds|0016810||,hydrolase activity|0016787||;go_process=N-acetylglucosamine metabolic process|0006044||;locus_tag=GGE_0270;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=EGT82907.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 908 2042 . - . ID=id-GGE_0270;Note=HMMPanther:PTHR11113~family not named;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 908 2039 . - . ID=id-GGE_0270-2;Dbxref=InterPro:IPR003764,TIGRFAM:TIGR00221;Note=naga: n-acetylglucosamine-6-phosphate deacet~n-acetylglucosamine-6-phosphate deacetylase;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 914 1067 . - . ID=id-GGE_0270-3;Dbxref=InterPro:IPR011059;Note=superfamily:SSF51338~composite domain of metallo-dependent hydrolase~metal-dependent hydrolase%2C composite domain;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 917 2030 . - . ID=id-GGE_0270-4;Note=specific~superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 1064 1844 . - . ID=id-GGE_0270-5;Dbxref=InterPro:IPR006680,PFAM:PF01979;Note=amidohydro_1~amidohydrolase 1;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 1073 1796 . - . ID=id-GGE_0270-6;Note=superfamily:SSF51556~metallo-dependent hydrolase;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 1076 1787 . - . ID=id-GGE_0270-7;Note=Gene3D:3.20.20.140;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 1727 1736 . - . ID=id-GGE_0270-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nagA;locus_tag=GGE_0270 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 989 1958 . + . ID=id-AFQR01000007.1:989..1958;Dbxref=InterPro:IPR011059;Note=superfamily:SSF51338~composite domain of metallo-dependent hydrolase~metal-dependent hydrolase%2C composite domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 998 1955 . + . ID=id-AFQR01000007.1:998..1955;Note=Gene3D:2.30.40.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 2111 2914 . - . ID=gene-GGE_0271;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank CDS 2111 2914 . - 0 ID=cds-EGT82908.1;Parent=gene-GGE_0271;Dbxref=InterPro:IPR004547,InterPro:IPR006148,InterPro:IPR018321,PFAM:PF01182,TIGRFAM:TIGR00502,NCBI_GP:EGT82908.1;Name=EGT82908.1;Ontology_term=GO:0006044,GO:0005975,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||;go_process=N-acetylglucosamine metabolic process|0006044||,carbohydrate metabolic process|0005975||;locus_tag=GGE_0271;product=Glucosamine-6-phosphate deaminase;protein_id=EGT82908.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2111 2909 . - . ID=id-GGE_0271;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2111 2894 . - . ID=id-GGE_0271-2;Note=Gene3D:3.40.50.1360;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2111 2891 . - . ID=id-GGE_0271-3;Dbxref=InterPro:IPR004547;Note=HMMPanther:PTHR11280~family not named~glucosamine-6-phosphate isomerase;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2111 2888 . - . ID=id-GGE_0271-4;Dbxref=InterPro:IPR004547,TIGRFAM:TIGR00502;Note=nagb: glucosamine-6-phosphate isomerase~glucosamine-6-phosphate isomerase;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2111 2852 . - . ID=id-GGE_0271-5;Dbxref=InterPro:IPR004547;Note=HAMAP:MF_01241~glcn6p_deamin~glucosamine-6-phosphate isomerase;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2141 2825 . - . ID=id-GGE_0271-6;Note=specific~superfamily%3B label: GlcN6P_deaminase;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2156 2819 . - . ID=id-GGE_0271-7;Dbxref=InterPro:IPR006148,PFAM:PF01182;Note=glucosamine_iso~glucosamine/galactosamine-6-phosphate isomerase;gbkey=misc_feature;gene=nagB;locus_tag=GGE_0271 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 2168 2486 . + . ID=id-AFQR01000007.1:2168..2486;Dbxref=InterPro:IPR018321;Note=PatternScan:PS01161~glc_galnac_isomerase~glucosamine-6-phosphate isomerase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 3093 3971 . - . ID=gene-GGE_0272;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank CDS 3093 3971 . - 0 ID=cds-EGT82909.1;Parent=gene-GGE_0272;Dbxref=GeneID:1171757,InterPro:IPR002220,InterPro:IPR002491,InterPro:IPR005264,InterPro:IPR013785,InterPro:IPR018717,InterPro:IPR020624,InterPro:IPR020625,PFAM:PF00701,PFAM:PF01497,PFAM:PF10000,TIGRFAM:TIGR00683,NCBI_GP:EGT82909.1;Name=EGT82909.1;Ontology_term=GO:0005975,GO:0006827,GO:0008152,GO:0005737,GO:0008747,GO:0003824,GO:0005381,GO:0016829;gbkey=CDS;gene=nanA;go_component=cytoplasm|0005737||;go_function=N-acetylneuraminate lyase activity|0008747||,catalytic activity|0003824||,iron ion transmembrane transporter activity|0005381||,lyase activity|0016829||;go_process=carbohydrate metabolic process|0005975||,high-affinity iron ion transport|0006827||,metabolic process|0008152||;locus_tag=GGE_0272;product=N-acetylneuraminate lyase;protein_id=EGT82909.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3093 3960 . - . ID=id-GGE_0272;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3102 3948 . - . ID=id-GGE_0272-2;Dbxref=InterPro:IPR002220,InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel~HMMPanther:PTHR12128:SF10~subfamily not named~HMMPanther:PTHR12128~family not named~dihydrodipicolinate synthetase;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3105 3960 . - . ID=id-GGE_0272-3;Dbxref=InterPro:IPR005264,TIGRFAM:TIGR00683;Note=HAMAP:MF_01237~n_acetylneuram_lyase~n-acetylneuraminate lyase~nana: n-acetylneuraminate lyase~n-acetylneuraminate lyase;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3105 3954 . - . ID=id-GGE_0272-4;Dbxref=InterPro:IPR002220,PFAM:PF00701;Note=dhdps~dihydrodipicolinate synthetase;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3105 3918 . - . ID=id-GGE_0272-5;Note=multi-dom%3B label: nanA;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3105 3906 . - . ID=id-GGE_0272-6;Note=specific~superfamily%3B label: NAL;gbkey=misc_feature;gene=nanA;locus_tag=GGE_0272 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3135 3930 . + . ID=id-AFQR01000007.1:3135..3930;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3144 3411 . + . ID=id-AFQR01000007.1:3144..3411;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3147 3486 . + . ID=id-AFQR01000007.1:3147..3486;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3147 3216 . + . ID=id-AFQR01000007.1:3147..3216;Dbxref=InterPro:IPR020624;Note=PatternScan:PS00665~dhdps_1~dihydrodipicolinate synthetase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3150 3315 . + . ID=id-AFQR01000007.1:3150..3315;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3159 3207 . + . ID=id-AFQR01000007.1:3159..3207;Dbxref=InterPro:IPR002220;Note=FPrintScan:PR00146~dhpicsnthase~dihydrodipicolinate synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3186 3501 . + . ID=id-AFQR01000007.1:3186..3501;Dbxref=InterPro:IPR020625;Note=PatternScan:PS00666~dhdps_2~dihydrodipicolinate synthetase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 3982 4848 . - . ID=gene-GGE_0273;Name=GGE_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank CDS 3982 4848 . - 0 ID=cds-EGT82910.1;Parent=gene-GGE_0273;Dbxref=GeneID:2507342,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR011991,PFAM:PF01380,PFAM:PF01418,NCBI_GP:EGT82910.1;Name=EGT82910.1;Note=HI_0143;Ontology_term=GO:0005975,GO:0006355,GO:0003700,GO:0005529;gbkey=CDS;go_function=sequence-specific DNA binding transcription factor activity|0003700||,sugar binding|0005529||;go_process=carbohydrate metabolic process|0005975||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0273;product=putative glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing;protein_id=EGT82910.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3991 4837 . - . ID=id-GGE_0273;Note=multi-dom%3B label: RpiR;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3991 4219 . - . ID=id-GGE_0273-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 3997 4213 . - . ID=id-GGE_0273-3;Dbxref=InterPro:IPR000281;Note=ProfileScan:PS51071~hth_rpir~helix-turn-helix protein rpir;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4000 4309 . - . ID=id-GGE_0273-4;Dbxref=InterPro:IPR000281,PFAM:PF01418;Note=hth_6~helix-turn-helix protein rpir;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4273 4522 . - . ID=id-GGE_0273-5;Note=superfamily:SSF53697~sis domain;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4285 4480 . - . ID=id-GGE_0273-6;Note=Gene3D:3.40.50.10490;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4309 4354 . - . ID=id-GGE_0273-7;Note=HMMPanther:PTHR10937~glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4354 4399 . - . ID=id-GGE_0273-8;Note=specific~superfamily%3B label: SIS superfamily;gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4369 4405 . - . ID=id-GGE_0273-9;Dbxref=InterPro:IPR001347;Note=ProfileScan:PS51464~sis~sugar isomerase (sis);gbkey=misc_feature;locus_tag=GGE_0273 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4363 4381 . + . ID=id-AFQR01000007.1:4363..4381;Dbxref=InterPro:IPR001347,PFAM:PF01380;Note=sis~sugar isomerase (sis);gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 4841 5743 . - . ID=gene-GGE_0274;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank CDS 4841 5743 . - 0 ID=cds-EGT82911.1;Parent=gene-GGE_0274;Dbxref=InterPro:IPR000600,PFAM:PF00480,NCBI_GP:EGT82911.1;Name=EGT82911.1;gbkey=CDS;gene=nanK;locus_tag=GGE_0274;product=N-acetylmannosamine kinase;protein_id=EGT82911.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4841 5723 . - . ID=id-GGE_0274;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4841 5714 . - . ID=id-GGE_0274-2;Note=multi-dom%3B label: PRK05082;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4841 5711 . - . ID=id-GGE_0274-3;Note=HAMAP:MF_01234~mannac_kinase;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4850 5234 . - . ID=id-GGE_0274-4;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4853 5681 . - . ID=id-GGE_0274-5;Note=HMMPanther:PTHR18964:SF19~glucose kinase~HMMPanther:PTHR18964~family not named;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4856 5378 . - . ID=id-GGE_0274-6;Dbxref=InterPro:IPR000600,PFAM:PF00480;Note=superfamily~rok~rok%3B label: FGGY_N superfamily;gbkey=misc_feature;gene=nanK;locus_tag=GGE_0274 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4886 5213 . + . ID=id-AFQR01000007.1:4886..5213;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 4925 5228 . + . ID=id-AFQR01000007.1:4925..5228;Dbxref=InterPro:IPR000600;Note=PatternScan:PS01125~rok~rok;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5219 5243 . + . ID=id-AFQR01000007.1:5219..5243;Note=Gene3D:3.30.420.160;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 5788 6474 . - . ID=gene-GGE_0275;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank CDS 5788 6474 . - 0 ID=cds-EGT82912.1;Parent=gene-GGE_0275;Dbxref=GeneID:2495664,InterPro:IPR007260,InterPro:IPR011060,InterPro:IPR013785,PFAM:PF04131,NCBI_GP:EGT82912.1;Name=EGT82912.1;Ontology_term=GO:0006051,GO:0008152,GO:0047465,GO:0003824;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||,catalytic activity|0003824||;go_process=N-acetylmannosamine metabolic process|0006051||,metabolic process|0008152||;locus_tag=GGE_0275;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=EGT82912.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5788 5851 . - . ID=id-GGE_0275;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5809 6430 . - . ID=id-GGE_0275-2;Note=specific~superfamily%3B label: NanE;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5821 6433 . - . ID=id-GGE_0275-3;Dbxref=InterPro:IPR007260,InterPro:IPR011060;Note=HAMAP:MF_01235~mannac6p_epimer~putative n-acetylmannosamine-6-phosphate epimerase~superfamily:SSF51366~ribulose-phoshate binding barrel~ribulose-phosphate binding barrel;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5824 6433 . - . ID=id-GGE_0275-4;Note=multi-dom%3B label: PRK01130;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5881 6343 . - . ID=id-GGE_0275-5;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 5893 6364 . - . ID=id-GGE_0275-6;Dbxref=InterPro:IPR007260,PFAM:PF04131;Note=nane~putative n-acetylmannosamine-6-phosphate epimerase;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 6118 6127 . - . ID=id-GGE_0275-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nanE;locus_tag=GGE_0275 GCA_000222085.2|AFQR01000007.1 Genbank gene 6837 7820 . + . ID=gene-GGE_0276;Name=siaP;gbkey=Gene;gene=siaP;gene_biotype=protein_coding;locus_tag=GGE_0276 GCA_000222085.2|AFQR01000007.1 Genbank CDS 6837 7820 . + 0 ID=cds-EGT82913.1;Parent=gene-GGE_0276;Dbxref=GeneID:1175165,InterPro:IPR004682,InterPro:IPR018389,PFAM:PF03480,TIGRFAM:TIGR00787,NCBI_GP:EGT82913.1;Name=EGT82913.1;Ontology_term=GO:0006810,GO:0030288;gbkey=CDS;gene=siaP;go_component=outer membrane-bounded periplasmic space|0030288||;go_process=transport|0006810||;locus_tag=GGE_0276;product=Sialic acid-binding periplasmic protein siaP;protein_id=EGT82913.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 6924 7686 . + . ID=id-GGE_0276;Dbxref=InterPro:IPR018389,PFAM:PF03480;Note=sbp_bac_7~extracellular solute-binding protein%2C family 7%2C bacteria;gbkey=misc_feature;gene=siaP;locus_tag=GGE_0276 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 6924 7611 . + . ID=id-GGE_0276-2;Dbxref=InterPro:IPR004682,TIGRFAM:TIGR00787;Note=superfamily~dctp: trap transporter solute receptor%2C dctp~trap dicarboxylate transporter%2C dctp subunit%3B label: SBP_bac_7 superfamily;gbkey=misc_feature;gene=siaP;locus_tag=GGE_0276 GCA_000222085.2|AFQR01000007.1 Genbank gene 7890 9740 . + . ID=gene-GGE_0277;Name=siaT;gbkey=Gene;gene=siaT;gene_biotype=protein_coding;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank CDS 7890 9740 . + 0 ID=cds-EGT82914.1;Parent=gene-GGE_0277;Dbxref=InterPro:IPR004681,InterPro:IPR007387,InterPro:IPR010656,PFAM:PF04290,PFAM:PF06808,TIGRFAM:TIGR00786,NCBI_GP:EGT82914.1;Name=EGT82914.1;Ontology_term=GO:0016021;gbkey=CDS;gene=siaT;go_component=integral to membrane|0016021||;locus_tag=GGE_0277;product=Sialic acid TRAP transporter permease protein siaT;protein_id=EGT82914.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7890 8397 . + . ID=id-GGE_0277;Note=superfamily%3B label: DctQ superfamily;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7911 7959 . + . ID=id-GGE_0277-2;Note=transmembrane_regions;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7947 8262 . + . ID=id-GGE_0277-3;Dbxref=InterPro:IPR007387,PFAM:PF04290;Note=dctq~tripartite atp-independent periplasmic transporter%2C dctq component;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 8484 9117 . + . ID=id-GGE_0277-4;Dbxref=InterPro:IPR010656,PFAM:PF06808;Note=dctm~trap c4-dicarboxylate transport system permease dctm subunit;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 8493 9108 . + . ID=id-GGE_0277-5;Note=multi-dom%3B label: DctM;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 8511 9105 . + . ID=id-GGE_0277-6;Dbxref=InterPro:IPR004681,TIGRFAM:TIGR00786;Note=superfamily~dctm: trap transporter%2C dctm subunit~trap dicarboxylate transporter%2C dctm subunit%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature;gene=siaT;locus_tag=GGE_0277 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7941 8775 . - . ID=id-AFQR01000007.1:7941..8775;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7944 8259 . - . ID=id-AFQR01000007.1:7944..8259;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7944 8148 . - . ID=id-AFQR01000007.1:7944..8148;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7944 8022 . - . ID=id-AFQR01000007.1:7944..8022;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7956 8136 . - . ID=id-AFQR01000007.1:7956..8136;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 9645 . - . ID=id-AFQR01000007.1:7959..9645;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 9540 . - . ID=id-AFQR01000007.1:7959..9540;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 9399 . - . ID=id-AFQR01000007.1:7959..9399;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 9273 . - . ID=id-AFQR01000007.1:7959..9273;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 9108 . - . ID=id-AFQR01000007.1:7959..9108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8973 . - . ID=id-AFQR01000007.1:7959..8973;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8877 . - . ID=id-AFQR01000007.1:7959..8877;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8748 . - . ID=id-AFQR01000007.1:7959..8748;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8622 . - . ID=id-AFQR01000007.1:7959..8622;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8472 . - . ID=id-AFQR01000007.1:7959..8472;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 7959 8346 . - . ID=id-AFQR01000007.1:7959..8346;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9744 9753 . + . ID=id-AFQR01000007.1:9744..9753;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9776 9785 . - . ID=id-AFQR01000007.1:9776..9785;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 9852 10991 . + . ID=gene-GGE_0278;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank CDS 9852 10991 . + 0 ID=cds-EGT82915.1;Parent=gene-GGE_0278;Dbxref=GeneID:189030807,InterPro:IPR006652,InterPro:IPR015915,InterPro:IPR019936,PFAM:PF01344,TIGRFAM:TIGR03547,NCBI_GP:EGT82915.1;Name=EGT82915.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nanM;go_function=protein binding|0005515||;locus_tag=GGE_0278;product=N-acetylneuraminate epimerase;protein_id=EGT82915.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9870 10974 . + . ID=id-GGE_0278;Note=multi-dom%3B label: PRK14131;gbkey=misc_feature;gene=nanM;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9876 10968 . + . ID=id-GGE_0278-2;Dbxref=InterPro:IPR019936;Note=HAMAP:MF_01195~nanm~mutatrotase%2C yjht-like;gbkey=misc_feature;gene=nanM;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9939 10884 . + . ID=id-GGE_0278-3;Dbxref=InterPro:IPR019936,TIGRFAM:TIGR03547;Note=muta_rot_yjht: mutatrotase%2C yjht family~mutatrotase%2C yjht-like;gbkey=misc_feature;gene=nanM;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9987 10845 . + . ID=id-GGE_0278-4;Note=superfamily:SSF117281~kelch motif;gbkey=misc_feature;gene=nanM;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 10062 10710 . + . ID=id-GGE_0278-5;Note=HMMPanther:PTHR23244:SF132~n-acetylneuraminate epimerase~HMMPanther:PTHR23244~family not named;gbkey=misc_feature;gene=nanM;locus_tag=GGE_0278 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9897 10353 . - . ID=id-AFQR01000007.1:9897..10353;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9993 10101 . - . ID=id-AFQR01000007.1:9993..10101;Dbxref=InterPro:IPR006652,PFAM:PF01344;Note=kelch_1~kelch repeat type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 9996 10098 . - . ID=id-AFQR01000007.1:9996..10098;Note=superfamily%3B label: Kelch_1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 10383 10443 . - . ID=id-AFQR01000007.1:10383..10443;Dbxref=InterPro:IPR015915;Note=Gene3D:2.120.10.80~kelch-type beta propeller;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 11180 12040 . + . ID=gene-GGE_0279;Name=GGE_0279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0279 GCA_000222085.2|AFQR01000007.1 Genbank CDS 11180 12040 . + 0 ID=cds-EGT82916.1;Parent=gene-GGE_0279;Dbxref=InterPro:IPR003352,InterPro:IPR013013,PFAM:PF02378,NCBI_GP:EGT82916.1;Name=EGT82916.1;Note=Hypothetical phosphotransferase system%2C EIIC;Ontology_term=GO:0009401,GO:0016020,GO:0008982,GO:0005351;gbkey=CDS;go_component=membrane|0016020||;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||,sugar:hydrogen symporter activity|0005351||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||;locus_tag=GGE_0279;product=putative phosphotransferase system%2C EIIC;protein_id=EGT82916.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11180 12038 . + . ID=id-GGE_0279;Dbxref=InterPro:IPR013013;Note=ProfileScan:PS51103~pts_eiic_type_1~phosphotransferase system%2C eiic component%2C type 1;gbkey=misc_feature;locus_tag=GGE_0279 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11180 11969 . + . ID=id-GGE_0279-2;Dbxref=InterPro:IPR003352,PFAM:PF02378;Note=superfamily~pts_eiic~phosphotransferase system%2C eiic%3B label: PTS_EIIC superfamily;gbkey=misc_feature;locus_tag=GGE_0279 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11240 11249 . + . ID=id-GGE_0279-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0279 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11234 11369 . - . ID=id-AFQR01000007.1:11234..11369;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11240 11849 . - . ID=id-AFQR01000007.1:11240..11849;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11249 11762 . - . ID=id-AFQR01000007.1:11249..11762;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11249 11585 . - . ID=id-AFQR01000007.1:11249..11585;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 11249 11480 . - . ID=id-AFQR01000007.1:11249..11480;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 12001 12468 . + . ID=gene-GGE_0280;Name=GGE_0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0280 GCA_000222085.2|AFQR01000007.1 Genbank CDS 12001 12468 . + 0 ID=cds-EGT82917.1;Parent=gene-GGE_0280;Dbxref=InterPro:IPR001996,InterPro:IPR011535,InterPro:IPR018113,PFAM:PF00367,TIGRFAM:TIGR00826,NCBI_GP:EGT82917.1;Name=EGT82917.1;Note=Hypothetical phosphotransferase system EIIB/cysteine%2C phosphorylation site;Ontology_term=GO:0009401,GO:0006810,GO:0016020,GO:0008982,GO:0005351;gbkey=CDS;go_component=membrane|0016020||;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||,sugar:hydrogen symporter activity|0005351||;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||,transport|0006810||;locus_tag=GGE_0280;product=putative phosphotransferase system EIIB/cysteine%2C phosphorylation site;protein_id=EGT82917.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12001 12211 . + . ID=id-GGE_0280;Note=superfamily%3B label: PTS_EIIC superfamily;gbkey=misc_feature;locus_tag=GGE_0280 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12154 12271 . + . ID=id-GGE_0280-2;Dbxref=InterPro:IPR011535,TIGRFAM:TIGR00826;Note=eiib_glc: pts system%2C glucose-like iib compo~phosphotransferase system%2C glucose-like iib component;gbkey=misc_feature;locus_tag=GGE_0280 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12235 12235 . + . ID=id-GGE_0280-3;Dbxref=InterPro:IPR001996;Note=specific~superfamily~ProfileScan:PS51098~pts_eiib_type_1~phosphotransferase system%2C eiib component%2C type 1%3B label: PTS_IIB_glc;gbkey=misc_feature;locus_tag=GGE_0280 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12055 12280 . - . ID=id-AFQR01000007.1:12055..12280;Dbxref=InterPro:IPR018113;Note=PatternScan:PS01035~pts_eiib_type_1_cys~phosphotransferase system eiib/cysteine%2C phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12070 12073 . - . ID=id-AFQR01000007.1:12070..12073;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12106 12244 . - . ID=id-AFQR01000007.1:12106..12244;Dbxref=InterPro:IPR018113,PFAM:PF00367;Note=pts_eiib~phosphotransferase system eiib/cysteine%2C phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12232 12238 . - . ID=id-AFQR01000007.1:12232..12238;Dbxref=InterPro:IPR001996;Note=superfamily:SSF55604~glucose permease domain iib~phosphotransferase system%2C eiib component%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12232 12235 . - . ID=id-AFQR01000007.1:12232..12235;Dbxref=InterPro:IPR001996;Note=Gene3D:3.30.1360.60~phosphotransferase system%2C eiib component%2C type 1;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12474 12483 . - . ID=id-AFQR01000007.1:12474..12483;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 12532 12966 . + . ID=gene-GGE_0281;Name=GGE_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank CDS 12532 12966 . + 0 ID=cds-EGT82918.1;Parent=gene-GGE_0281;Dbxref=GeneID:319775979,InterPro:IPR001171,PFAM:PF01222,NCBI_GP:EGT82918.1;Name=EGT82918.1;Note=YP_004138467;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0281;product=putative ergosterol biosynthesis ERG4/ERG24;protein_id=EGT82918.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12544 12601 . + . ID=id-GGE_0281;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12547 12556 . + . ID=id-GGE_0281-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12571 12928 . + . ID=id-GGE_0281-3;Note=superfamily%3B label: ICMT superfamily;gbkey=misc_feature;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12724 12766 . + . ID=id-GGE_0281-4;Dbxref=InterPro:IPR001171,PFAM:PF01222;Note=erg4_erg24~ergosterol biosynthesis erg4/erg24;gbkey=misc_feature;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12739 12760 . + . ID=id-GGE_0281-5;Note=HMMPanther:PTHR12714~family not named;gbkey=misc_feature;locus_tag=GGE_0281 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12574 12784 . - . ID=id-AFQR01000007.1:12574..12784;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12601 12802 . - . ID=id-AFQR01000007.1:12601..12802;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12601 12625 . - . ID=id-AFQR01000007.1:12601..12625;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 12673 12826 . - . ID=id-AFQR01000007.1:12673..12826;Note=BlastProDom:PD049902~q4qp38_haei8_q4qp38;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 13009 13896 . - . ID=gene-GGE_0282;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank CDS 13009 13896 . - 0 ID=cds-EGT82919.1;Parent=gene-GGE_0282;Dbxref=GeneID:1170266,InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR010200,PFAM:PF01145,TIGRFAM:TIGR01932,NCBI_GP:EGT82919.1;Name=EGT82919.1;Ontology_term=GO:0016021,GO:0016020,GO:0008233;gbkey=CDS;gene=hflC;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=peptidase activity|0008233||;locus_tag=GGE_0282;product=Protein HflC;protein_id=EGT82919.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13009 13894 . - . ID=id-GGE_0282;Note=multi-dom%3B label: PRK11029;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13009 13882 . - . ID=id-GGE_0282-2;Dbxref=InterPro:IPR010200,TIGRFAM:TIGR01932;Note=hflc: hflc protein~hflc;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13021 13873 . - . ID=id-GGE_0282-3;Dbxref=InterPro:IPR001972;Note=HMMPanther:PTHR10264:SF19~band 7 protein-related~HMMPanther:PTHR10264~band 7 protein-related~stomatin;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13024 13078 . - . ID=id-GGE_0282-4;Note=transmembrane_regions;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13042 13048 . - . ID=id-GGE_0282-5;Note=seg;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13075 13567 . - . ID=id-GGE_0282-6;Dbxref=InterPro:IPR001107,PFAM:PF01145;Note=band_7~band 7 protein;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13081 13753 . - . ID=id-GGE_0282-7;Note=specific~superfamily%3B label: Band_7 superfamily;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13177 13438 . - . ID=id-GGE_0282-8;Note=superfamily:SSF117892~band 7/spfh domain;gbkey=misc_feature;gene=hflC;locus_tag=GGE_0282 GCA_000222085.2|AFQR01000007.1 Genbank gene 13896 15143 . - . ID=gene-GGE_0283;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank CDS 13896 15143 . - 0 ID=cds-EGT82920.1;Parent=gene-GGE_0283;Dbxref=InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR010201,InterPro:IPR020980,PFAM:PF01145,PFAM:PF12221,TIGRFAM:TIGR01933,NCBI_GP:EGT82920.1;Name=EGT82920.1;Ontology_term=GO:0016021,GO:0016020;gbkey=CDS;gene=hflK;go_component=integral to membrane|0016021||,membrane|0016020||;locus_tag=GGE_0283;product=Protein HflK;protein_id=EGT82920.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13902 15021 . - . ID=id-GGE_0283;Dbxref=InterPro:IPR001972;Note=HMMPanther:PTHR10264:SF19~band 7 protein-related~HMMPanther:PTHR10264~band 7 protein-related~stomatin;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13953 13983 . - . ID=id-GGE_0283-2;Note=seg;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13971 14025 . - . ID=id-GGE_0283-3;Dbxref=InterPro:IPR020980,PFAM:PF12221;Note=hflk_n~menbrane protein hflk;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 14166 14655 . - . ID=id-GGE_0283-4;Note=specific~superfamily%3B label: Band_7 superfamily;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 14208 14679 . - . ID=id-GGE_0283-5;Dbxref=InterPro:IPR010201,TIGRFAM:TIGR01933;Note=multi-dom~hflk: hflk protein~hflk%3B label: hflK;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 14211 14421 . - . ID=id-GGE_0283-6;Dbxref=InterPro:IPR001107,PFAM:PF01145;Note=band_7~band 7 protein;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 14295 14307 . - . ID=id-GGE_0283-7;Note=superfamily:SSF117892~band 7/spfh domain;gbkey=misc_feature;gene=hflK;locus_tag=GGE_0283 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13950 14469 . + . ID=id-AFQR01000007.1:13950..14469;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13962 14364 . + . ID=id-AFQR01000007.1:13962..14364;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13965 14223 . + . ID=id-AFQR01000007.1:13965..14223;Dbxref=InterPro:IPR001972;Note=FPrintScan:PR00721~stomatin~stomatin;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 13968 14064 . + . ID=id-AFQR01000007.1:13968..14064;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 15508 15517 . + . ID=id-AFQR01000007.1:15508..15517;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 15553 15562 . - . ID=id-AFQR01000007.1:15553..15562;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 15699 16199 . - . ID=gene-GGE_0284;Name=GGE_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0284 GCA_000222085.2|AFQR01000007.1 Genbank CDS 15699 16199 . - 0 ID=cds-EGT82921.1;Parent=gene-GGE_0284;Dbxref=GeneID:325576952,InterPro:IPR018958,PFAM:PF09346,NCBI_GP:EGT82921.1;Name=EGT82921.1;Note=ZP_08147523;gbkey=CDS;locus_tag=GGE_0284;product=SMI1/KNR4 family protein;protein_id=EGT82921.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 15735 16134 . - . ID=id-GGE_0284;Note=Gene3D:3.40.1580.10;gbkey=misc_feature;locus_tag=GGE_0284 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 15762 16107 . - . ID=id-GGE_0284-2;Note=superfamily%3B label: SMI1_KNR4 superfamily;gbkey=misc_feature;locus_tag=GGE_0284 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 15765 16101 . - . ID=id-GGE_0284-3;Dbxref=InterPro:IPR018958,PFAM:PF09346;Note=smi1_knr4~cell wall assembly/cell proliferation coordinating protein%2C knr4-like;gbkey=misc_feature;locus_tag=GGE_0284 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 16657 16735 . + . ID=id-AFQR01000007.1:16657..16735;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 17072 17455 . - . ID=gene-GGE_0285;Name=GGE_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0285 GCA_000222085.2|AFQR01000007.1 Genbank CDS 17072 17455 . - 0 ID=cds-EGT82922.1;Parent=gene-GGE_0285;Dbxref=NCBI_GP:EGT82922.1;Name=EGT82922.1;Note=Hypothetical lipoprotein;gbkey=CDS;locus_tag=GGE_0285;product=putative lipoprotein;protein_id=EGT82922.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17072 17147 . - . ID=id-GGE_0285;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0285 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17090 17123 . - . ID=id-GGE_0285-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0285 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17093 17126 . - . ID=id-GGE_0285-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0285 GCA_000222085.2|AFQR01000007.1 Genbank gene 17540 18247 . - . ID=gene-GGE_0286;Name=GGE_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank CDS 17540 18247 . - 0 ID=cds-EGT82923.1;Parent=gene-GGE_0286;Dbxref=GeneID:1175173,InterPro:IPR008278,PFAM:PF01648,NCBI_GP:EGT82923.1;Name=EGT82923.1;Note=HI_0152;Ontology_term=GO:0009059,GO:0008897,GO:0000287;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||,magnesium ion binding|0000287||;go_process=macromolecule biosynthetic process|0009059||;locus_tag=GGE_0286;product=putative transferase-like protein;protein_id=EGT82923.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17540 18206 . - . ID=id-GGE_0286;Note=multi-dom%3B label: Sfp;gbkey=misc_feature;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17549 17873 . - . ID=id-GGE_0286-2;Dbxref=InterPro:IPR008278;Note=superfamily:SSF56214~4'-phosphopantetheinyl transferase~4'-phosphopantetheinyl transferase;gbkey=misc_feature;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17753 17825 . - . ID=id-GGE_0286-3;Note=HMMPanther:PTHR12215~family not named;gbkey=misc_feature;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17861 17900 . - . ID=id-GGE_0286-4;Dbxref=InterPro:IPR008278;Note=superfamily:SSF56214~4'-phosphopantetheinyl transferase~4'-phosphopantetheinyl transferase;gbkey=misc_feature;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17921 17930 . - . ID=id-GGE_0286-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0286 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17570 17681 . + . ID=id-AFQR01000007.1:17570..17681;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17608 17617 . + . ID=id-AFQR01000007.1:17608..17617;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17702 17867 . + . ID=id-AFQR01000007.1:17702..17867;Note=superfamily%3B label: ACPS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17714 17867 . + . ID=id-AFQR01000007.1:17714..17867;Dbxref=InterPro:IPR008278,PFAM:PF01648;Note=acps~4'-phosphopantetheinyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 17720 17867 . + . ID=id-AFQR01000007.1:17720..17867;Dbxref=InterPro:IPR008278;Note=Gene3D:3.90.470.20~4'-phosphopantetheinyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18051 18060 . + . ID=id-AFQR01000007.1:18051..18060;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 18308 19639 . - . ID=gene-GGE_0287;Name=GGE_0287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank CDS 18308 19639 . - 0 ID=cds-EGT82924.1;Parent=gene-GGE_0287;Dbxref=GeneID:68248761,InterPro:IPR004668,PFAM:PF03605,PIR:PIRSF004539,TIGRFAM:TIGR00770,NCBI_GP:EGT82924.1;Name=EGT82924.1;Note=YP_247873;Ontology_term=GO:0015740,GO:0016021,GO:0015556;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||;go_process=C4-dicarboxylate transport|0015740||;locus_tag=GGE_0287;product=anaerobic C4-dicarboxylate transporter;protein_id=EGT82924.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18308 19634 . - . ID=id-GGE_0287;Dbxref=InterPro:IPR004668,PIR:PIRSF004539;Note=anaerobic c4-dicarboxylate transporter~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18308 18353 . - . ID=id-GGE_0287-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18323 19622 . - . ID=id-GGE_0287-3;Dbxref=InterPro:IPR004668,TIGRFAM:TIGR00770;Note=dcu: transporter%2C anaerobic c4-dicarboxylate~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18323 19418 . - . ID=id-GGE_0287-4;Dbxref=InterPro:IPR004668,PFAM:PF03605;Note=dcua_dcub~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18356 19529 . - . ID=id-GGE_0287-5;Note=superfamily%3B label: DcuA_DcuB superfamily;gbkey=misc_feature;locus_tag=GGE_0287 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18344 19103 . + . ID=id-AFQR01000007.1:18344..19103;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18347 19031 . + . ID=id-AFQR01000007.1:18347..19031;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18347 18368 . + . ID=id-AFQR01000007.1:18347..18368;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18356 19577 . + . ID=id-AFQR01000007.1:18356..19577;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18368 19313 . + . ID=id-AFQR01000007.1:18368..19313;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18368 18368 . + . ID=id-AFQR01000007.1:18368..18368;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 19565 . + . ID=id-AFQR01000007.1:18377..19565;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 19391 . + . ID=id-AFQR01000007.1:18377..19391;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 19187 . + . ID=id-AFQR01000007.1:18377..19187;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 19100 . + . ID=id-AFQR01000007.1:18377..19100;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 19019 . + . ID=id-AFQR01000007.1:18377..19019;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 18815 . + . ID=id-AFQR01000007.1:18377..18815;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 18704 . + . ID=id-AFQR01000007.1:18377..18704;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 18575 . + . ID=id-AFQR01000007.1:18377..18575;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 18377 18464 . + . ID=id-AFQR01000007.1:18377..18464;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19773 19782 . + . ID=id-AFQR01000007.1:19773..19782;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 19843 20073 . - . ID=gene-GGE_0288;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank CDS 19843 20073 . - 0 ID=cds-EGT82925.1;Parent=gene-GGE_0288;Dbxref=GeneID:1168312,InterPro:IPR003231,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,PFAM:PF00550,TIGRFAM:TIGR00517,NCBI_GP:EGT82925.1;Name=EGT82925.1;Ontology_term=GO:0006633,GO:0000036,GO:0048037,GO:0031177;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||,cofactor binding|0048037||,phosphopantetheine binding|0031177||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_0288;product=Acyl carrier protein;protein_id=EGT82925.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19843 20071 . - . ID=id-GGE_0288;Dbxref=InterPro:IPR003231,InterPro:IPR009081,TIGRFAM:TIGR00517;Note=superfamily~Gene3D:1.10.1200.10~acyl carrier like protein~superfamily:SSF47336~acp-like~acyl carrier like protein~acyl_carrier: acyl carrier protein~acyl carrier protein (acp)%3B label: PP-binding superfamily;gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19849 20068 . - . ID=id-GGE_0288-2;Dbxref=InterPro:IPR003231;Note=HAMAP:MF_01217~acyl_carrier~acyl carrier protein (acp);gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19849 20056 . - . ID=id-GGE_0288-3;Note=HMMPanther:PTHR20863:SF21~acyl carrier protein~HMMPanther:PTHR20863~family not named;gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19852 20056 . - . ID=id-GGE_0288-4;Dbxref=InterPro:IPR009081;Note=ProfileScan:PS50075~acp_domain~acyl carrier like protein;gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19858 20047 . - . ID=id-GGE_0288-5;Dbxref=InterPro:IPR006163,PFAM:PF00550;Note=pp-binding~phosphopantetheine-binding;gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19942 19969 . - . ID=id-GGE_0288-6;Note=BlastProDom:PD000887~acp_cylsn_p27060;gbkey=misc_feature;gene=acpP;locus_tag=GGE_0288 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19885 19984 . + . ID=id-AFQR01000007.1:19885..19984;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 19891 19936 . + . ID=id-AFQR01000007.1:19891..19936;Dbxref=InterPro:IPR006162;Note=PatternScan:PS00012~phosphopantetheine~phosphopantetheine attachment site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 20346 21074 . - . ID=gene-GGE_0289;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank CDS 20346 21074 . - 0 ID=cds-EGT82926.1;Parent=gene-GGE_0289;Dbxref=GeneID:1169591,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011284,InterPro:IPR016040,InterPro:IPR020904,PFAM:PF00106,TIGRFAM:TIGR01830,NCBI_GP:EGT82926.1;Name=EGT82926.1;Ontology_term=GO:0006633,GO:0008152,GO:0055114,GO:0004316,GO:0051287,GO:0005488,GO:0003824,GO:0016491;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase activity|0004316||,NAD or NADH binding|0051287||,binding|0005488||,catalytic activity|0003824||,oxidoreductase activity|0016491||;go_process=fatty acid biosynthetic process|0006633||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0289;product=3-oxoacyl-acyl-carrier-protein reductase;protein_id=EGT82926.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20346 21069 . - . ID=id-GGE_0289;Dbxref=InterPro:IPR016040;Note=multi-dom~Gene3D:3.40.50.720~nad(p)-binding domain~HMMPanther:PTHR24322~family not named%3B label: fabG;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20346 21060 . - . ID=id-GGE_0289-2;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20358 21057 . - . ID=id-GGE_0289-3;Note=specific~superfamily%3B label: BKR_SDR_c;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20358 20838 . - . ID=id-GGE_0289-4;Dbxref=InterPro:IPR002198,PFAM:PF00106;Note=adh_short~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20361 20400 . - . ID=id-GGE_0289-5;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20364 21051 . - . ID=id-GGE_0289-6;Dbxref=InterPro:IPR011284,TIGRFAM:TIGR01830;Note=3oxo_acp_reduc: 3-oxoacyl-[acyl-carrie~3-oxoacyl-(acyl-carrier-protein) reductase;gbkey=misc_feature;gene=fabG;locus_tag=GGE_0289 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20373 20733 . + . ID=id-AFQR01000007.1:20373..20733;Dbxref=InterPro:IPR002198;Note=FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20382 20574 . + . ID=id-AFQR01000007.1:20382..20574;Dbxref=InterPro:IPR002198,InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase~FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20397 20715 . + . ID=id-AFQR01000007.1:20397..20715;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20400 20856 . + . ID=id-AFQR01000007.1:20400..20856;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20406 20793 . + . ID=id-AFQR01000007.1:20406..20793;Dbxref=InterPro:IPR002198,InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase~FPrintScan:PR00080~sdrfamily~short-chain dehydrogenase/reductase sdr;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20409 20955 . + . ID=id-AFQR01000007.1:20409..20955;Dbxref=InterPro:IPR002347;Note=FPrintScan:PR00081~gdhrdh~glucose/ribitol dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 20433 20754 . + . ID=id-AFQR01000007.1:20433..20754;Dbxref=InterPro:IPR020904;Note=PatternScan:PS00061~adh_short~short-chain dehydrogenase/reductase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 21087 22025 . - . ID=gene-GGE_0290;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank CDS 21087 22025 . - 0 ID=cds-EGT82927.1;Parent=gene-GGE_0290;Dbxref=GeneID:1169590,InterPro:IPR001227,InterPro:IPR004410,InterPro:IPR014043,InterPro:IPR016035,InterPro:IPR016036,PFAM:PF00698,TIGRFAM:TIGR00128,NCBI_GP:EGT82927.1;Name=EGT82927.1;Ontology_term=GO:0006633,GO:0008152,GO:0004314,GO:0005488,GO:0003824,GO:0016740;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||,binding|0005488||,catalytic activity|0003824||,transferase activity|0016740||;go_process=fatty acid biosynthetic process|0006633||,metabolic process|0008152||;locus_tag=GGE_0290;product=Malonyl CoA-acyl carrier protein transacylase;protein_id=EGT82927.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21087 22014 . - . ID=id-GGE_0290;Note=superfamily%3B label: Acyl_transf_1 superfamily;gbkey=misc_feature;gene=fabD;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21093 22020 . - . ID=id-GGE_0290-2;Dbxref=InterPro:IPR016035;Note=superfamily:SSF52151~fabd/lysophospholipase-like~acyl transferase/acyl hydrolase/lysophospholipase;gbkey=misc_feature;gene=fabD;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21093 21963 . - . ID=id-GGE_0290-3;Dbxref=InterPro:IPR004410,TIGRFAM:TIGR00128;Note=multi-dom~fabd: malonyl coa-acyl carrier protein trans~malonyl coa-acyl carrier protein transacylase%3B label: fabD;gbkey=misc_feature;gene=fabD;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21102 22002 . - . ID=id-GGE_0290-4;Note=HMMPanther:PTHR10982~malonyl coa-acyl carrier protein transacylase;gbkey=misc_feature;gene=fabD;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21108 21939 . - . ID=id-GGE_0290-5;Dbxref=InterPro:IPR014043,PFAM:PF00698;Note=acyl_transf_1~acyl transferase;gbkey=misc_feature;gene=fabD;locus_tag=GGE_0290 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21297 21474 . + . ID=id-AFQR01000007.1:21297..21474;Dbxref=InterPro:IPR016036;Note=superfamily:SSF55048~probable acp-binding domain of malonyl-coa acp transacylase~malonyl-coa acp transacylase%2C acp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21300 21465 . + . ID=id-AFQR01000007.1:21300..21465;Note=Gene3D:3.30.70.250;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 21396 21678 . + . ID=id-AFQR01000007.1:21396..21678;Dbxref=InterPro:IPR001227;Note=Gene3D:3.40.366.10~acyl transferase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22351 22360 . - . ID=id-AFQR01000007.1:22351..22360;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 22392 23342 . - . ID=gene-GGE_0291;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank CDS 22392 23342 . - 0 ID=cds-EGT82928.1;Parent=gene-GGE_0291;Dbxref=GeneID:1169592,InterPro:IPR004655,InterPro:IPR013747,InterPro:IPR013751,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08541,PFAM:PF08545,TIGRFAM:TIGR00747,NCBI_GP:EGT82928.1;Name=EGT82928.1;Ontology_term=GO:0006633,GO:0008610,GO:0008152,GO:0004315,GO:0003824,GO:0016747;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||,catalytic activity|0003824||,transferase activity transferring acyl groups other than amino-acyl groups|0016747||;go_process=fatty acid biosynthetic process|0006633||,lipid biosynthetic process|0008610||,metabolic process|0008152||;locus_tag=GGE_0291;product=3-oxoacyl-acyl-carrier-protein synthase 3;protein_id=EGT82928.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22392 23340 . - . ID=id-GGE_0291;Dbxref=InterPro:IPR004655,TIGRFAM:TIGR00747;Note=multi-dom~HAMAP:MF_01815~fabh~beta-ketoacyl-acyl carrier protein synthase iii (fabh)~fabh: 3-oxoacyl-[acyl-carrier-protein] synth~beta-ketoacyl-acyl carrier protein synthase iii (fabh)%3B label: PRK09352;gbkey=misc_feature;gene=fabH;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22392 23337 . - . ID=id-GGE_0291-2;Note=HMMPanther:PTHR11877:SF13~subfamily not named~HMMPanther:PTHR11877~family not named;gbkey=misc_feature;gene=fabH;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22392 22872 . - . ID=id-GGE_0291-3;Dbxref=InterPro:IPR016038;Note=Gene3D:3.40.47.10~thiolase-like%2C subgroup;gbkey=misc_feature;gene=fabH;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22398 23337 . - . ID=id-GGE_0291-4;Dbxref=InterPro:IPR016039;Note=superfamily:SSF53901~thiolase-like~thiolase-like;gbkey=misc_feature;gene=fabH;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22398 23331 . - . ID=id-GGE_0291-5;Note=specific~superfamily%3B label: cond_enzyme superfamily;gbkey=misc_feature;gene=fabH;locus_tag=GGE_0291 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22434 23073 . + . ID=id-AFQR01000007.1:22434..23073;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22620 22710 . + . ID=id-AFQR01000007.1:22620..22710;Dbxref=InterPro:IPR013751,PFAM:PF08545;Note=acp_syn_iii~3-oxoacyl-[acyl-carrier-protein (acp)] synthase iii;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22656 23079 . + . ID=id-AFQR01000007.1:22656..23079;Dbxref=InterPro:IPR013747,PFAM:PF08541;Note=acp_syn_iii_c~3-oxoacyl-[acyl-carrier-protein (acp)] synthase iii c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 22857 22875 . + . ID=id-AFQR01000007.1:22857..22875;Dbxref=InterPro:IPR016038;Note=Gene3D:3.40.47.10~thiolase-like%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 23363 24382 . - . ID=gene-GGE_0292;Name=GGE_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank CDS 23363 24382 . - 0 ID=cds-EGT82929.1;Parent=gene-GGE_0292;Dbxref=GeneID:52425925,InterPro:IPR003664,InterPro:IPR012281,PFAM:PF02504,PIR:PIRSF002465,TIGRFAM:TIGR00182,NCBI_GP:EGT82929.1;Name=EGT82929.1;Note=YP_089062;Ontology_term=GO:0006633,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;go_process=fatty acid biosynthetic process|0006633||;locus_tag=GGE_0292;product=putative glycerol-3-phosphate acyltransferase PlsX;protein_id=EGT82929.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23363 24380 . - . ID=id-GGE_0292;Dbxref=InterPro:IPR012281;Note=HAMAP:MF_00019~plsx~phospholipid biosynthesis protein%2C plsx-like;gbkey=misc_feature;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23369 24377 . - . ID=id-GGE_0292-2;Dbxref=InterPro:IPR012281,PIR:PIRSF002465;Note=phospholipid biosynthesis protein%2C plsx type~phospholipid biosynthesis protein%2C plsx-like;gbkey=misc_feature;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23372 24374 . - . ID=id-GGE_0292-3;Note=superfamily~superfamily:SSF53659~isocitrate/isopropylmalate dehydrogenase-like%3B label: PTA_PTB superfamily;gbkey=misc_feature;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23375 24368 . - . ID=id-GGE_0292-4;Dbxref=InterPro:IPR012281,TIGRFAM:TIGR00182;Note=plsx: fatty acid/phospholipid synthesis prot~phospholipid biosynthesis protein%2C plsx-like;gbkey=misc_feature;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23375 24341 . - . ID=id-GGE_0292-5;Dbxref=InterPro:IPR003664,PFAM:PF02504;Note=fa_synthesis~fatty acid synthesis plsx protein;gbkey=misc_feature;locus_tag=GGE_0292 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 23414 24287 . + . ID=id-AFQR01000007.1:23414..24287;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 24404 24574 . - . ID=gene-GGE_0293;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank CDS 24404 24574 . - 0 ID=cds-EGT82930.1;Parent=gene-GGE_0293;Dbxref=InterPro:IPR002677,InterPro:IPR011332,PFAM:PF01783,TIGRFAM:TIGR01031,NCBI_GP:EGT82930.1;Name=EGT82930.1;Ontology_term=GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmF;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0293;product=50S ribosomal protein L32;protein_id=EGT82930.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24404 24572 . - . ID=id-GGE_0293;Note=superfamily%3B label: Ribosomal_L32p superfamily;gbkey=misc_feature;gene=rpmF;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24404 24569 . - . ID=id-GGE_0293-2;Dbxref=InterPro:IPR002677;Note=HAMAP:MF_00340~ribosomal_l32~ribosomal protein l32p;gbkey=misc_feature;gene=rpmF;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24410 24569 . - . ID=id-GGE_0293-3;Dbxref=InterPro:IPR002677,InterPro:IPR011332,PFAM:PF01783;Note=superfamily:SSF57829~zn-binding ribosomal proteins~ribosomal protein%2C zinc-binding domain~ribosomal_l32p~ribosomal protein l32p;gbkey=misc_feature;gene=rpmF;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24410 24566 . - . ID=id-GGE_0293-4;Dbxref=InterPro:IPR002677,TIGRFAM:TIGR01031;Note=rpmf_bact: ribosomal protein l32~ribosomal protein l32p;gbkey=misc_feature;gene=rpmF;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24431 24434 . - . ID=id-GGE_0293-5;Note=seg;gbkey=misc_feature;gene=rpmF;locus_tag=GGE_0293 GCA_000222085.2|AFQR01000007.1 Genbank gene 24597 25121 . - . ID=gene-GGE_0294;Name=GGE_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0294 GCA_000222085.2|AFQR01000007.1 Genbank CDS 24597 25121 . - 0 ID=cds-EGT82931.1;Parent=gene-GGE_0294;Dbxref=GeneID:1175640,InterPro:IPR003772,PFAM:PF02620,NCBI_GP:EGT82931.1;Name=EGT82931.1;Note=HI_0159;gbkey=CDS;locus_tag=GGE_0294;product=hypothetical protein;protein_id=EGT82931.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24597 25116 . - . ID=id-GGE_0294;Note=superfamily%3B label: DUF177 superfamily;gbkey=misc_feature;locus_tag=GGE_0294 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 24780 24933 . - . ID=id-GGE_0294-2;Dbxref=InterPro:IPR003772,PFAM:PF02620;Note=duf177~protein of unknown function duf177;gbkey=misc_feature;locus_tag=GGE_0294 GCA_000222085.2|AFQR01000007.1 Genbank gene 25278 26150 . + . ID=gene-GGE_0295;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank CDS 25278 26150 . + 0 ID=cds-EGT82932.1;Parent=gene-GGE_0295;Dbxref=GeneID:1169420,InterPro:IPR003817,InterPro:IPR005221,PFAM:PF02666,TIGRFAM:TIGR00163,NCBI_GP:EGT82932.1;Name=EGT82932.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||;go_process=phospholipid biosynthetic process|0008654||;locus_tag=GGE_0295;product=Phosphatidylserine decarboxylase proenzyme;protein_id=EGT82932.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25299 26130 . + . ID=id-GGE_0295;Note=superfamily%3B label: PS_Dcarbxylase superfamily;gbkey=misc_feature;gene=psd;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25326 26103 . + . ID=id-GGE_0295-2;Dbxref=InterPro:IPR005221;Note=HAMAP:MF_00662~ps_decarb_type1~phosphatidylserine decarboxylase;gbkey=misc_feature;gene=psd;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25407 26004 . + . ID=id-GGE_0295-3;Dbxref=InterPro:IPR005221;Note=HMMPanther:PTHR10067~phosphatidylserine decarboxylase~phosphatidylserine decarboxylase;gbkey=misc_feature;gene=psd;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25443 25986 . + . ID=id-GGE_0295-4;Dbxref=InterPro:IPR005221,TIGRFAM:TIGR00163;Note=ps_decarb: phosphatidylserine decarboxylase~phosphatidylserine decarboxylase;gbkey=misc_feature;gene=psd;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25485 25935 . + . ID=id-GGE_0295-5;Dbxref=InterPro:IPR003817,PFAM:PF02666;Note=ps_dcarbxylase~phosphatidylserine decarboxylase-related;gbkey=misc_feature;gene=psd;locus_tag=GGE_0295 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 25541 25550 . - . ID=id-AFQR01000007.1:25541..25550;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 26175 26798 . + . ID=gene-GGE_0296;Name=GGE_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank CDS 26175 26798 . + 0 ID=cds-EGT82933.1;Parent=gene-GGE_0296;Dbxref=GeneID:325579154,InterPro:IPR000774,InterPro:IPR001179,InterPro:IPR023566,PFAM:PF00254,PFAM:PF01346,NCBI_GP:EGT82933.1;Name=EGT82933.1;Note=ZP_08149110;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||;locus_tag=GGE_0296;product=peptidyl-prolyl cis-trans isomerase;protein_id=EGT82933.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26175 26793 . + . ID=id-GGE_0296;Dbxref=InterPro:IPR023566;Note=HMMPanther:PTHR10516~peptidyl-prolyl cis-trans isomerase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26187 26442 . + . ID=id-GGE_0296-2;Dbxref=InterPro:IPR000774;Note=Gene3D:1.10.287.460~peptidyl-prolyl cis-trans isomerase%2C fkbp-type;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26193 26487 . + . ID=id-GGE_0296-3;Dbxref=InterPro:IPR000774,PFAM:PF01346;Note=superfamily~fkbp_n~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%3B label: FKBP_N superfamily;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26196 26775 . + . ID=id-GGE_0296-4;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26199 26775 . + . ID=id-GGE_0296-5;Note=multi-dom%3B label: PRK11570;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26454 26517 . + . ID=id-GGE_0296-6;Note=Gene3D:3.10.50.40;gbkey=misc_feature;locus_tag=GGE_0296 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26217 26367 . - . ID=id-AFQR01000007.1:26217..26367;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26262 26343 . - . ID=id-AFQR01000007.1:26262..26343;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26436 26538 . - . ID=id-AFQR01000007.1:26436..26538;Dbxref=InterPro:IPR001179;Note=ProfileScan:PS50059~fkbp_ppiase~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26451 26514 . - . ID=id-AFQR01000007.1:26451..26514;Dbxref=InterPro:IPR001179,PFAM:PF00254;Note=superfamily~fkbp_c~peptidyl-prolyl cis-trans isomerase%2C fkbp-type%2C domain%3B label: FKBP_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 26862 28064 . - . ID=gene-GGE_0297;Name=GGE_0297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank CDS 26862 28064 . - 0 ID=cds-EGT82934.1;Parent=gene-GGE_0297;Dbxref=GeneID:1176289,InterPro:IPR004792,InterPro:IPR023166,PFAM:PF03486,TIGRFAM:TIGR00275,NCBI_GP:EGT82934.1;Name=EGT82934.1;Note=HI_0933;gbkey=CDS;locus_tag=GGE_0297;product=Hypothetical protein;protein_id=EGT82934.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26868 28059 . - . ID=id-GGE_0297;Note=multi-dom%3B label: COG2081;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26880 26931 . - . ID=id-GGE_0297-2;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26883 28032 . - . ID=id-GGE_0297-3;Dbxref=InterPro:IPR004792,PFAM:PF03486,TIGRFAM:TIGR00275;Note=hi0933_like~conserved hypothetical protein chp00275%2C flavoprotein hi0933-like~tigr00275: flavoprotein%2C hi0933 family~conserved hypothetical protein chp00275%2C flavoprotein hi0933-like;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26883 26916 . - . ID=id-GGE_0297-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26886 28041 . - . ID=id-GGE_0297-5;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26886 28032 . - . ID=id-GGE_0297-6;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26886 27138 . - . ID=id-GGE_0297-7;Note=HMMPanther:PTHR10668~phytoene dehydrogenase;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26895 26913 . - . ID=id-GGE_0297-8;Note=seg;gbkey=misc_feature;locus_tag=GGE_0297 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26886 27960 . + . ID=id-AFQR01000007.1:26886..27960;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 26892 27342 . + . ID=id-AFQR01000007.1:26892..27342;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 27021 27684 . + . ID=id-AFQR01000007.1:27021..27684;Dbxref=InterPro:IPR023166;Note=Gene3D:1.10.8.260~hi0933 insert-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 27036 27891 . + . ID=id-AFQR01000007.1:27036..27891;Note=Gene3D:3.50.50.60;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 27105 27441 . + . ID=id-AFQR01000007.1:27105..27441;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 27430 27439 . + . ID=id-AFQR01000007.1:27430..27439;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 28061 29218 . - . ID=gene-GGE_0298;Name=GGE_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0298 GCA_000222085.2|AFQR01000007.1 Genbank CDS 28061 29218 . - 0 ID=cds-EGT82935.1;Parent=gene-GGE_0298;Dbxref=GeneID:319897575,InterPro:IPR005616,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR017565,InterPro:IPR019734,PFAM:PF03918,TIGRFAM:TIGR03147,NCBI_GP:EGT82935.1;Name=EGT82935.1;Note=YP_004135772;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_0298;product=cytochrome c-type biogenesis protein;protein_id=EGT82935.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28118 28439 . - . ID=id-GGE_0298;Dbxref=InterPro:IPR017565,TIGRFAM:TIGR03147;Note=cyt_nit_nrff: cytochrome c nitrite reduc~formate-dependent nitrite reductase complex%2C subunit nrff;gbkey=misc_feature;locus_tag=GGE_0298 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28118 28121 . - . ID=id-GGE_0298-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0298 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28124 28469 . - . ID=id-GGE_0298-3;Dbxref=InterPro:IPR005616,PFAM:PF03918;Note=ccmh~cytochrome c biogenesis protein ccmh;gbkey=misc_feature;locus_tag=GGE_0298 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28163 28394 . - . ID=id-GGE_0298-4;Note=superfamily%3B label: CcmH superfamily;gbkey=misc_feature;locus_tag=GGE_0298 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28103 28121 . + . ID=id-AFQR01000007.1:28103..28121;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28115 28421 . + . ID=id-AFQR01000007.1:28115..28421;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28121 28631 . + . ID=id-AFQR01000007.1:28121..28631;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28130 28412 . + . ID=id-AFQR01000007.1:28130..28412;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28163 28829 . + . ID=id-AFQR01000007.1:28163..28829;Dbxref=InterPro:IPR019734;Note=ProfileScan:PS50005~tpr~tetratricopeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28265 28742 . + . ID=id-AFQR01000007.1:28265..28742;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28292 28946 . + . ID=id-AFQR01000007.1:28292..28946;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28317 28326 . + . ID=id-AFQR01000007.1:28317..28326;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28358 28742 . + . ID=id-AFQR01000007.1:28358..28742;Note=specific~superfamily%3B label: TPR;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28406 28784 . + . ID=id-AFQR01000007.1:28406..28784;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28463 28796 . + . ID=id-AFQR01000007.1:28463..28796;Note=HMMPanther:PTHR26312:SF50~formate-dependent nitrite reductase complex subunit nrfg~HMMPanther:PTHR26312~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28478 28727 . + . ID=id-AFQR01000007.1:28478..28727;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 28616 28652 . + . ID=id-AFQR01000007.1:28616..28652;Note=multi-dom%3B label: PRK10370;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 29215 29745 . - . ID=gene-GGE_0299;Name=nrfX;gbkey=Gene;gene=nrfX;gene_biotype=protein_coding;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank CDS 29215 29745 . - 0 ID=cds-EGT82936.1;Parent=gene-GGE_0299;Dbxref=GeneID:1169433,InterPro:IPR004799,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF08534,TIGRFAM:TIGR00385,NCBI_GP:EGT82936.1;Name=EGT82936.1;Ontology_term=GO:0045454,GO:0017004,GO:0006662,GO:0030288,GO:0015036,GO:0009055,GO:0016491,GO:0015035;gbkey=CDS;gene=nrfX;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=disulfide oxidoreductase activity|0015036||,electron carrier activity|0009055||,oxidoreductase activity|0016491||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,cytochrome complex assembly|0017004||,glycerol ether metabolic process|0006662||;locus_tag=GGE_0299;product=Putative thiol:disulfide interchange protein DsbE-2;protein_id=EGT82936.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29230 29719 . - . ID=id-GGE_0299;Dbxref=InterPro:IPR004799,TIGRFAM:TIGR00385;Note=dsbe: periplasmic protein thiol:disulfide ox~periplasmic protein thiol disulfide oxidoreductase dsbe;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29230 29284 . - . ID=id-GGE_0299-2;Note=transmembrane_regions;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29233 29719 . - . ID=id-GGE_0299-3;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29257 29689 . - . ID=id-GGE_0299-4;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29320 29638 . - . ID=id-GGE_0299-5;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29332 29590 . - . ID=id-GGE_0299-6;Note=specific~superfamily%3B label: Thioredoxin_like superfamily;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29332 29566 . - . ID=id-GGE_0299-7;Dbxref=InterPro:IPR013740,PFAM:PF08534;Note=redoxin~redoxin;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29410 29506 . - . ID=id-GGE_0299-8;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438:SF20~subfamily not named~HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature;gene=nrfX;locus_tag=GGE_0299 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29272 29416 . + . ID=id-AFQR01000007.1:29272..29416;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 29745 31652 . - . ID=gene-GGE_0300;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank CDS 29745 31652 . - 0 ID=cds-EGT82937.1;Parent=gene-GGE_0300;Dbxref=GeneID:1171768,InterPro:IPR002541,InterPro:IPR003567,InterPro:IPR003568,InterPro:IPR003570,InterPro:IPR017563,PFAM:PF01578,TIGRFAM:TIGR00353,TIGRFAM:TIGR03145,NCBI_GP:EGT82937.1;Name=EGT82937.1;Ontology_term=GO:0017004,GO:0015886,GO:0006461,GO:0008535,GO:0016020,GO:0015232;gbkey=CDS;gene=nrfE;go_component=membrane|0016020||;go_function=heme transporter activity|0015232||;go_process=cytochrome complex assembly|0017004||,heme transport|0015886||,protein complex assembly|0006461||,respiratory chain complex IV assembly|0008535||;locus_tag=GGE_0300;product=Cytochrome c-type biogenesis protein NrfE;protein_id=EGT82937.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29745 31626 . - . ID=id-GGE_0300;Dbxref=InterPro:IPR017563,TIGRFAM:TIGR03145;Note=superfamily~cyt_nit_nrfe: cytochrome c nitrate reduc~cytochrome c nitrate reductase biogenesis protein nrfe%3B label: Cytochrom_C_asm superfamily;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29760 29814 . - . ID=id-GGE_0300-2;Note=transmembrane_regions;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29760 29799 . - . ID=id-GGE_0300-3;Note=seg;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29904 31485 . - . ID=id-GGE_0300-4;Dbxref=InterPro:IPR003568,TIGRFAM:TIGR00353;Note=nrfe: cytochrome c-type biogenesis prote~cytochrome c-type biogenesis protein ccmf;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 30012 30366 . - . ID=id-GGE_0300-5;Dbxref=InterPro:IPR002541,PFAM:PF01578;Note=cytochrom_c_asm~cytochrome c assembly protein;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 30630 30639 . - . ID=id-GGE_0300-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nrfE;locus_tag=GGE_0300 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29775 30801 . + . ID=id-AFQR01000007.1:29775..30801;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29775 30504 . + . ID=id-AFQR01000007.1:29775..30504;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29781 30570 . + . ID=id-AFQR01000007.1:29781..30570;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29784 30867 . + . ID=id-AFQR01000007.1:29784..30867;Dbxref=InterPro:IPR003570;Note=FPrintScan:PR01413~nrfebiognsis~cytochrome c-type biogenesis protein nrfe;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29787 31608 . + . ID=id-AFQR01000007.1:29787..31608;Dbxref=InterPro:IPR003570;Note=FPrintScan:PR01413~nrfebiognsis~cytochrome c-type biogenesis protein nrfe;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29787 30684 . + . ID=id-AFQR01000007.1:29787..30684;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29793 30699 . + . ID=id-AFQR01000007.1:29793..30699;Dbxref=InterPro:IPR003570;Note=FPrintScan:PR01413~nrfebiognsis~cytochrome c-type biogenesis protein nrfe;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29796 30627 . + . ID=id-AFQR01000007.1:29796..30627;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29796 30036 . + . ID=id-AFQR01000007.1:29796..30036;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29799 30483 . + . ID=id-AFQR01000007.1:29799..30483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29799 30141 . + . ID=id-AFQR01000007.1:29799..30141;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29802 30765 . + . ID=id-AFQR01000007.1:29802..30765;Dbxref=InterPro:IPR003570;Note=FPrintScan:PR01413~nrfebiognsis~cytochrome c-type biogenesis protein nrfe;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29805 31269 . + . ID=id-AFQR01000007.1:29805..31269;Dbxref=InterPro:IPR003570;Note=FPrintScan:PR01413~nrfebiognsis~cytochrome c-type biogenesis protein nrfe;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29805 31020 . + . ID=id-AFQR01000007.1:29805..31020;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29805 30675 . + . ID=id-AFQR01000007.1:29805..30675;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29805 30030 . + . ID=id-AFQR01000007.1:29805..30030;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29808 30567 . + . ID=id-AFQR01000007.1:29808..30567;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29808 30477 . + . ID=id-AFQR01000007.1:29808..30477;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 31566 . + . ID=id-AFQR01000007.1:29814..31566;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 31194 . + . ID=id-AFQR01000007.1:29814..31194;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 31092 . + . ID=id-AFQR01000007.1:29814..31092;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30915 . + . ID=id-AFQR01000007.1:29814..30915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30804 . + . ID=id-AFQR01000007.1:29814..30804;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30681 . + . ID=id-AFQR01000007.1:29814..30681;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30555 . + . ID=id-AFQR01000007.1:29814..30555;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30372 . + . ID=id-AFQR01000007.1:29814..30372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30267 . + . ID=id-AFQR01000007.1:29814..30267;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30222 . + . ID=id-AFQR01000007.1:29814..30222;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 30108 . + . ID=id-AFQR01000007.1:29814..30108;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29814 29865 . + . ID=id-AFQR01000007.1:29814..29865;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29826 30375 . + . ID=id-AFQR01000007.1:29826..30375;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 29826 29985 . + . ID=id-AFQR01000007.1:29826..29985;Dbxref=InterPro:IPR003567;Note=FPrintScan:PR01410~ccbiogenesis~cytochrome c-type biogenesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31290 31299 . + . ID=id-AFQR01000007.1:31290..31299;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 31896 32699 . - . ID=gene-GGE_0301;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank CDS 31896 32699 . - 0 ID=cds-EGT82938.1;Parent=gene-GGE_0301;Dbxref=GeneID:1174479,InterPro:IPR000760,InterPro:IPR020550,InterPro:IPR020583,InterPro:IPR022337,PFAM:PF00459,NCBI_GP:EGT82938.1;Name=EGT82938.1;Ontology_term=GO:0004437,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol or phosphatidylinositol phosphatase activity|0004437||,inositol-1(or 4)-monophosphatase activity|0008934||;locus_tag=GGE_0301;product=Inositol-1-monophosphatase;protein_id=EGT82938.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31896 32694 . - . ID=id-GGE_0301;Note=superfamily:SSF56655~carbohydrate phosphatase;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31896 32670 . - . ID=id-GGE_0301-2;Dbxref=InterPro:IPR000760;Note=HMMPanther:PTHR20854:SF10~subfamily not named~HMMPanther:PTHR20854~family not named~inositol monophosphatase;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31902 32667 . - . ID=id-GGE_0301-3;Dbxref=InterPro:IPR000760,PFAM:PF00459;Note=inositol_p~inositol monophosphatase;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31902 32343 . - . ID=id-GGE_0301-4;Note=Gene3D:3.30.540.10;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31908 32625 . - . ID=id-GGE_0301-5;Note=specific~superfamily%3B label: FIG superfamily;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31947 31965 . - . ID=id-GGE_0301-6;Dbxref=InterPro:IPR022337;Note=FPrintScan:PR01959~sbimphphtase~inositol monophosphatase%2C suhb;gbkey=misc_feature;gene=suhB;locus_tag=GGE_0301 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31926 32034 . + . ID=id-AFQR01000007.1:31926..32034;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31935 32490 . + . ID=id-AFQR01000007.1:31935..32490;Dbxref=InterPro:IPR022337;Note=FPrintScan:PR01959~sbimphphtase~inositol monophosphatase%2C suhb;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31938 32139 . + . ID=id-AFQR01000007.1:31938..32139;Dbxref=InterPro:IPR020583;Note=PatternScan:PS00629~imp_1~inositol monophosphatase%2C metal-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31941 32529 . + . ID=id-AFQR01000007.1:31941..32529;Dbxref=InterPro:IPR020550;Note=PatternScan:PS00630~imp_2~inositol monophosphatase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31947 32139 . + . ID=id-AFQR01000007.1:31947..32139;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31947 32076 . + . ID=id-AFQR01000007.1:31947..32076;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31956 32208 . + . ID=id-AFQR01000007.1:31956..32208;Dbxref=InterPro:IPR022337;Note=FPrintScan:PR01959~sbimphphtase~inositol monophosphatase%2C suhb;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31959 32010 . + . ID=id-AFQR01000007.1:31959..32010;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31962 32427 . + . ID=id-AFQR01000007.1:31962..32427;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31968 32286 . + . ID=id-AFQR01000007.1:31968..32286;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31971 32520 . + . ID=id-AFQR01000007.1:31971..32520;Dbxref=InterPro:IPR000760;Note=FPrintScan:PR00377~imphphtases~inositol monophosphatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 31977 32364 . + . ID=id-AFQR01000007.1:31977..32364;Dbxref=InterPro:IPR022337;Note=FPrintScan:PR01959~sbimphphtase~inositol monophosphatase%2C suhb;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32232 32349 . + . ID=id-AFQR01000007.1:32232..32349;Note=Gene3D:3.40.190.80;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32870 32879 . + . ID=id-AFQR01000007.1:32870..32879;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 32899 33417 . + . ID=gene-GGE_0302;Name=GGE_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank CDS 32899 33417 . + 0 ID=cds-EGT82939.1;Parent=gene-GGE_0302;Dbxref=InterPro:IPR001120,InterPro:IPR012902,TIGRFAM:TIGR02532,NCBI_GP:EGT82939.1;Name=EGT82939.1;Note=HI_0938;gbkey=CDS;locus_tag=GGE_0302;product=putative prepilin-like protein;protein_id=EGT82939.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32899 33406 . + . ID=id-GGE_0302;Note=multi-dom%3B label: PulG;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32905 32971 . + . ID=id-GGE_0302-2;Dbxref=InterPro:IPR012902,TIGRFAM:TIGR02532;Note=iv_pilin_gfxxxe: prepilin-type n-term~prepilin-type cleavage/methylation;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32908 32962 . + . ID=id-GGE_0302-3;Dbxref=InterPro:IPR001120;Note=PatternScan:PS00409~prokar_nter_methyl~prokaryotic n-terminal methylation site;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32917 33148 . + . ID=id-GGE_0302-4;Note=superfamily:SSF54523~pili subunits;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32920 32968 . + . ID=id-GGE_0302-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 32929 32938 . + . ID=id-GGE_0302-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_0302 GCA_000222085.2|AFQR01000007.1 Genbank gene 33402 34127 . + . ID=gene-GGE_0303;Name=GGE_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0303 GCA_000222085.2|AFQR01000007.1 Genbank CDS 33402 34127 . + 0 ID=cds-EGT82940.1;Parent=gene-GGE_0303;Dbxref=GeneID:1175336,InterPro:IPR016419,PIR:PIRSF004525,NCBI_GP:EGT82940.1;Name=EGT82940.1;Note=HI_0939;gbkey=CDS;locus_tag=GGE_0303;product=putative prepilin peptidase-dependent protein B%2C predicted;protein_id=EGT82940.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 33414 34116 . + . ID=id-GGE_0303;Dbxref=InterPro:IPR016419,PIR:PIRSF004525;Note=predicted prepilin peptidase-dependent protein b~prepilin peptidase-dependent protein b%2C predicted;gbkey=misc_feature;locus_tag=GGE_0303 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 33441 33471 . + . ID=id-GGE_0303-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0303 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 33444 33459 . + . ID=id-GGE_0303-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0303 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 33501 34026 . + . ID=id-GGE_0303-4;Note=multi-dom%3B label: PulJ;gbkey=misc_feature;locus_tag=GGE_0303 GCA_000222085.2|AFQR01000007.1 Genbank gene 34127 34810 . + . ID=gene-GGE_0304;Name=GGE_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0304 GCA_000222085.2|AFQR01000007.1 Genbank CDS 34127 34810 . + 0 ID=cds-EGT82941.1;Parent=gene-GGE_0304;Dbxref=InterPro:IPR022543,PFAM:PF10833,NCBI_GP:EGT82941.1;Name=EGT82941.1;Note=HI_0940;gbkey=CDS;locus_tag=GGE_0304;product=Hypothetical protein;protein_id=EGT82941.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34127 34793 . + . ID=id-GGE_0304;Note=BlastProDom:PD115088~y940_haein_p44081;gbkey=misc_feature;locus_tag=GGE_0304 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34142 34787 . + . ID=id-GGE_0304-2;Dbxref=InterPro:IPR022543,PFAM:PF10833;Note=superfamily~duf2572~protein of unknown function duf2572%3B label: DUF2572 superfamily;gbkey=misc_feature;locus_tag=GGE_0304 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34148 34187 . + . ID=id-GGE_0304-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0304 GCA_000222085.2|AFQR01000007.1 Genbank gene 34794 35090 . + . ID=gene-GGE_0305;Name=GGE_0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0305 GCA_000222085.2|AFQR01000007.1 Genbank CDS 34794 35090 . + 0 ID=cds-EGT82942.1;Parent=gene-GGE_0305;Dbxref=InterPro:IPR020511,NCBI_GP:EGT82942.1;Name=EGT82942.1;Note=HI_0941;gbkey=CDS;locus_tag=GGE_0305;product=Hypothetical protein;protein_id=EGT82942.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34821 34842 . + . ID=id-GGE_0305;Note=seg;gbkey=misc_feature;locus_tag=GGE_0305 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34824 34863 . + . ID=id-GGE_0305-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0305 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 34869 35016 . + . ID=id-GGE_0305-3;Dbxref=InterPro:IPR020511;Note=BlastProDom:PD068240~y941_haein_p44082~uncharacterised protein family hi0941;gbkey=misc_feature;locus_tag=GGE_0305 GCA_000222085.2|AFQR01000007.1 Genbank gene 35139 38498 . + . ID=gene-GGE_0306;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank CDS 35139 38498 . + 0 ID=cds-EGT82943.1;Parent=gene-GGE_0306;Dbxref=GeneID:1169573,InterPro:IPR006697,InterPro:IPR011335,PFAM:PF04257,TIGRFAM:TIGR01450,NCBI_GP:EGT82943.1;Name=EGT82943.1;Ontology_term=GO:0009338,GO:0003677,GO:0008854;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||;go_function=DNA binding|0003677||,exodeoxyribonuclease V activity|0008854||;locus_tag=GGE_0306;product=Exodeoxyribonuclease V gamma chain;protein_id=EGT82943.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 35139 36264 . + . ID=id-GGE_0306;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recC;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 35145 38373 . + . ID=id-GGE_0306-2;Dbxref=InterPro:IPR006697,TIGRFAM:TIGR01450;Note=recc: exodeoxyribonuclease v%2C gamma subunit~exodeoxyribonuclease v%2C recc subunit;gbkey=misc_feature;gene=recC;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 35145 38265 . + . ID=id-GGE_0306-3;Dbxref=PFAM:PF04257;Note=multi-dom~exonuc_v_gamma%3B label: Exonuc_V_gamma;gbkey=misc_feature;gene=recC;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 35145 38238 . + . ID=id-GGE_0306-4;Note=superfamily%3B label: recC superfamily;gbkey=misc_feature;gene=recC;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 36237 36480 . + . ID=id-GGE_0306-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=recC;locus_tag=GGE_0306 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 35181 35781 . - . ID=id-AFQR01000007.1:35181..35781;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 36039 37587 . - . ID=id-AFQR01000007.1:36039..37587;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 36866 36875 . - . ID=id-AFQR01000007.1:36866..36875;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 36935 36944 . - . ID=id-AFQR01000007.1:36935..36944;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 38561 39010 . + . ID=gene-GGE_0307;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank CDS 38561 39010 . + 0 ID=cds-EGT82944.1;Parent=gene-GGE_0307;Dbxref=GeneID:189030550,InterPro:IPR003796,InterPro:IPR005144,PFAM:PF03477,TIGRFAM:TIGR00244,NCBI_GP:EGT82944.1;Name=EGT82944.1;Ontology_term=GO:0016481,GO:0016564,GO:0008270;gbkey=CDS;gene=nrdR;go_function=transcription repressor activity|0016564||,zinc ion binding|0008270||;go_process=negative regulation of transcription|0016481||;locus_tag=GGE_0307;product=Transcriptional repressor NrdR;protein_id=EGT82944.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38561 39008 . + . ID=id-GGE_0307;Dbxref=InterPro:IPR003796;Note=multi-dom~HAMAP:MF_00440~nrdr~ribonucleotide reductase regulator nrdr-like%3B label: nrdR;gbkey=misc_feature;gene=nrdR;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38561 39002 . + . ID=id-GGE_0307-2;Dbxref=InterPro:IPR003796,TIGRFAM:TIGR00244;Note=tigr00244: transcriptional regulator nrdr~ribonucleotide reductase regulator nrdr-like;gbkey=misc_feature;gene=nrdR;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38708 38834 . + . ID=id-GGE_0307-3;Dbxref=InterPro:IPR005144;Note=ProfileScan:PS51161~atp_cone~atp-cone;gbkey=misc_feature;gene=nrdR;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38708 38810 . + . ID=id-GGE_0307-4;Note=superfamily%3B label: ATP-cone superfamily;gbkey=misc_feature;gene=nrdR;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38711 38816 . + . ID=id-GGE_0307-5;Dbxref=InterPro:IPR005144,PFAM:PF03477;Note=atp-cone~atp-cone;gbkey=misc_feature;gene=nrdR;locus_tag=GGE_0307 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 38597 38639 . - . ID=id-AFQR01000007.1:38597..38639;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 39013 40131 . + . ID=gene-GGE_0308;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank CDS 39013 40131 . + 0 ID=cds-EGT82945.1;Parent=gene-GGE_0308;Dbxref=GeneID:1172932,InterPro:IPR002125,InterPro:IPR002734,InterPro:IPR004794,InterPro:IPR011549,InterPro:IPR016192,InterPro:IPR016193,PFAM:PF00383,PFAM:PF01872,TIGRFAM:TIGR00227,TIGRFAM:TIGR00326,NCBI_GP:EGT82945.1;Name=EGT82945.1;Ontology_term=GO:0055114,GO:0009231,GO:0008703,GO:0050661,GO:0003824,GO:0008835,GO:0016787,GO:0008270;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||,NADP or NADPH binding|0050661||,catalytic activity|0003824||,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||,hydrolase activity|0016787||,zinc ion binding|0008270||;go_process=oxidation-reduction process|0055114||,riboflavin biosynthetic process|0009231||;locus_tag=GGE_0308;product=Riboflavin biosynthesis protein RibD;protein_id=EGT82945.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39031 39622 . + . ID=id-GGE_0308;Dbxref=InterPro:IPR004794;Note=HMMPanther:PTHR11079:SF10~riboflavin-specific deaminase~riboflavin biosynthesis protein ribd~HMMPanther:PTHR11079~family not named;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39034 39448 . + . ID=id-GGE_0308-2;Dbxref=InterPro:IPR016193;Note=superfamily:SSF53927~cytidine deaminase-like~cytidine deaminase-like;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39034 39394 . + . ID=id-GGE_0308-3;Note=Gene3D:3.40.140.10;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39034 39307 . + . ID=id-GGE_0308-4;Dbxref=InterPro:IPR002125,PFAM:PF00383;Note=dcmp_cyt_deam_1~cmp/dcmp deaminase%2C zinc-binding;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39049 40078 . + . ID=id-GGE_0308-5;Dbxref=InterPro:IPR004794,TIGRFAM:TIGR00326;Note=multi-dom~eubact_ribd: riboflavin biosynthesis prot~riboflavin biosynthesis protein ribd%3B label: eubact_ribD;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39049 39352 . + . ID=id-GGE_0308-6;Note=specific~superfamily%3B label: cytidine_deaminase-like superfamily;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39388 39397 . + . ID=id-GGE_0308-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39415 39718 . + . ID=id-GGE_0308-8;Note=Gene3D:3.40.430.10;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39460 39679 . + . ID=id-GGE_0308-9;Note=superfamily:SSF53597~dihydrofolate reductase-like;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39463 39673 . + . ID=id-GGE_0308-10;Dbxref=InterPro:IPR011549,TIGRFAM:TIGR00227;Note=superfamily~ribd_cterm: riboflavin-specific deaminase~riboflavin-specific deaminase%3B label: DHFR superfamily;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39469 39655 . + . ID=id-GGE_0308-11;Dbxref=InterPro:IPR002734,PFAM:PF01872;Note=ribd_c~bacterial bifunctional deaminase-reductase;gbkey=misc_feature;gene=ribD;locus_tag=GGE_0308 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39043 39589 . - . ID=id-AFQR01000007.1:39043..39589;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 39130 39178 . - . ID=id-AFQR01000007.1:39130..39178;Dbxref=InterPro:IPR016192;Note=PatternScan:PS00903~cyt_dcmp_deaminases~apobec/cmp deaminase%2C zinc-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 40132 41154 . + . ID=gene-GGE_0309;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank CDS 40132 41154 . + 0 ID=cds-EGT82946.1;Parent=gene-GGE_0309;Dbxref=GeneID:1170273,InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011783,PFAM:PF00089,PFAM:PF00595,TIGRFAM:TIGR02038,NCBI_GP:EGT82946.1;Name=EGT82946.1;Ontology_term=GO:0006508,GO:0003824,GO:0005515,GO:0004252;gbkey=CDS;gene=degS;go_function=catalytic activity|0003824||,protein binding|0005515||,serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0309;product=Protease degS;protein_id=EGT82946.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40132 40903 . + . ID=id-GGE_0309;Dbxref=InterPro:IPR009003;Note=superfamily:SSF50494~trypsin-like serine proteases~peptidase cysteine/serine%2C trypsin-like;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40138 41146 . + . ID=id-GGE_0309-2;Dbxref=InterPro:IPR011783,TIGRFAM:TIGR02038;Note=multi-dom~protease_degs: periplasmic serine pepti~peptidase s1c%2C degs%3B label: protease_degS;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40147 40192 . + . ID=id-GGE_0309-3;Note=transmembrane_regions;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40234 41047 . + . ID=id-GGE_0309-4;Note=HMMPanther:PTHR22939:SF10~serine protease do/htra-related~HMMPanther:PTHR22939~family not named;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40243 40744 . + . ID=id-GGE_0309-5;Note=superfamily%3B label: Tryp_SPc superfamily;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40249 40462 . + . ID=id-GGE_0309-6;Note=Gene3D:2.40.10.10;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40309 40624 . + . ID=id-GGE_0309-7;Dbxref=InterPro:IPR001254,PFAM:PF00089;Note=trypsin~peptidase s1/s6%2C chymotrypsin/hap;gbkey=misc_feature;gene=degS;locus_tag=GGE_0309 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40171 40981 . - . ID=id-AFQR01000007.1:40171..40981;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40171 40387 . - . ID=id-AFQR01000007.1:40171..40387;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40186 40744 . - . ID=id-AFQR01000007.1:40186..40744;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40186 40678 . - . ID=id-AFQR01000007.1:40186..40678;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40195 40450 . - . ID=id-AFQR01000007.1:40195..40450;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40207 40570 . - . ID=id-AFQR01000007.1:40207..40570;Dbxref=InterPro:IPR001940;Note=FPrintScan:PR00834~proteases2c~peptidase s1c%2C hrta/degp2/q/s;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40345 40918 . - . ID=id-AFQR01000007.1:40345..40918;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40351 40882 . - . ID=id-AFQR01000007.1:40351..40882;Dbxref=InterPro:IPR001478,PFAM:PF00595;Note=pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40366 40915 . - . ID=id-AFQR01000007.1:40366..40915;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40375 40861 . - . ID=id-AFQR01000007.1:40375..40861;Dbxref=InterPro:IPR001478;Note=ProfileScan:PS50106~pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40396 40885 . - . ID=id-AFQR01000007.1:40396..40885;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 40435 40579 . - . ID=id-AFQR01000007.1:40435..40579;Note=Gene3D:2.40.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 41215 42030 . - . ID=gene-GGE_0310;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank CDS 41215 42030 . - 0 ID=cds-EGT82947.1;Parent=gene-GGE_0310;Dbxref=GeneID:166215626,InterPro:IPR000191,InterPro:IPR000214,InterPro:IPR010663,InterPro:IPR010979,InterPro:IPR012319,InterPro:IPR015886,InterPro:IPR015887,InterPro:IPR020629,PFAM:PF01149,PFAM:PF06827,PFAM:PF06831,TIGRFAM:TIGR00577,NCBI_GP:EGT82947.1;Name=EGT82947.1;Ontology_term=GO:0006281,GO:0006284,GO:0006289,GO:0003677,GO:0003906,GO:0003824,GO:0003684,GO:0016799,GO:0003676,GO:0008534,GO:0008270;gbkey=CDS;gene=mutM;go_function=DNA binding|0003677||,DNA-(apurinic or apyrimidinic site) lyase activity|0003906||,catalytic activity|0003824||,damaged DNA binding|0003684||,hydrolase activity hydrolyzing N-glycosyl compounds|0016799||,nucleic acid binding|0003676||,oxidized purine base lesion DNA N-glycosylase activity|0008534||,zinc ion binding|0008270||;go_process=DNA repair|0006281||,base-excision repair|0006284||,nucleotide-excision repair|0006289||;locus_tag=GGE_0310;product=Formamidopyrimidine-DNA glycosylase;protein_id=EGT82947.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41215 42025 . - . ID=id-GGE_0310;Note=HMMPanther:PTHR22993:SF4~formamidopyrimidine-dna glycosylase (fapy-dna glycosylase)~HMMPanther:PTHR22993~family not named;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41215 42022 . - . ID=id-GGE_0310-2;Dbxref=InterPro:IPR020629;Note=multi-dom~HAMAP:MF_00103~fapy_dna_glycosyl~formamidopyrimidine-dna glycosylase%3B label: PRK01103;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41215 42019 . - . ID=id-GGE_0310-3;Dbxref=InterPro:IPR000191,TIGRFAM:TIGR00577;Note=fpg: formamidopyrimidine-dna glycosylase~dna glycosylase/ap lyase;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41221 41626 . - . ID=id-GGE_0310-4;Dbxref=InterPro:IPR012319;Note=superfamily:SSF81624~n-terminal domain of mutm-like dna repair proteins~dna glycosylase/ap lyase%2C catalytic domain;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41221 41566 . - . ID=id-GGE_0310-5;Note=specific~superfamily%3B label: EcFpg-like_N;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41221 41554 . - . ID=id-GGE_0310-6;Dbxref=InterPro:IPR012319,PFAM:PF01149;Note=fapy_dna_glyco~dna glycosylase/ap lyase%2C catalytic domain;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41221 41548 . - . ID=id-GGE_0310-7;Dbxref=InterPro:IPR012319;Note=ProfileScan:PS51068~fpg_cat~dna glycosylase/ap lyase%2C catalytic domain;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41286 41295 . - . ID=id-GGE_0310-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mutM;locus_tag=GGE_0310 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41290 41947 . + . ID=id-AFQR01000007.1:41290..41947;Dbxref=InterPro:IPR015887;Note=PatternScan:PS01242~zf_fpg_1~dna glycosylase/ap lyase%2C zinc finger domain%2C dna-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41299 41941 . + . ID=id-AFQR01000007.1:41299..41941;Dbxref=InterPro:IPR010663,PFAM:PF06827;Note=superfamily~zf-fpg_ilers~zinc finger%2C dna glycosylase/ap lyase/isoleucyl trna synthetase%3B label: zf-FPG_IleRS superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41320 41920 . + . ID=id-AFQR01000007.1:41320..41920;Dbxref=InterPro:IPR000214;Note=ProfileScan:PS51066~zf_fpg_2~zinc finger%2C dna glycosylase/ap lyase-type;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41368 41680 . + . ID=id-AFQR01000007.1:41368..41680;Note=Gene3D:1.10.8.50;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41374 41866 . + . ID=id-AFQR01000007.1:41374..41866;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41479 41602 . + . ID=id-AFQR01000007.1:41479..41602;Dbxref=InterPro:IPR015886,PFAM:PF06831;Note=h2th~dna glycosylase/ap lyase%2C h2th dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41491 41602 . + . ID=id-AFQR01000007.1:41491..41602;Note=superfamily%3B label: H2TH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 41494 41605 . + . ID=id-AFQR01000007.1:41494..41605;Dbxref=InterPro:IPR010979;Note=superfamily:SSF46946~s13-like h2th domain~ribosomal protein s13-like%2C h2th;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 42102 42272 . - . ID=gene-GGE_0311;Name=GGE_0311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank CDS 42102 42272 . - 0 ID=cds-EGT82948.1;Parent=gene-GGE_0311;Dbxref=GeneID:16272888,InterPro:IPR001705,InterPro:IPR011332,InterPro:IPR018264,PFAM:PF00471,TIGRFAM:TIGR01023,NCBI_GP:EGT82948.1;Name=EGT82948.1;Note=NP_439111;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0311;product=50S ribosomal protein L33;protein_id=EGT82948.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42102 42270 . - . ID=id-GGE_0311;Dbxref=InterPro:IPR001705,TIGRFAM:TIGR01023;Note=HMMPanther:PTHR15238~family not named~rpmg_bact: ribosomal protein l33~ribosomal protein l33;gbkey=misc_feature;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42108 42261 . - . ID=id-GGE_0311-2;Note=superfamily%3B label: Ribosomal_L33 superfamily;gbkey=misc_feature;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42111 42258 . - . ID=id-GGE_0311-3;Dbxref=InterPro:IPR011332;Note=superfamily:SSF57829~zn-binding ribosomal proteins~ribosomal protein%2C zinc-binding domain;gbkey=misc_feature;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42120 42249 . - . ID=id-GGE_0311-4;Dbxref=InterPro:IPR001705;Note=HAMAP:MF_00294~ribosomal_l33~ribosomal protein l33;gbkey=misc_feature;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42123 42246 . - . ID=id-GGE_0311-5;Dbxref=InterPro:IPR001705,PFAM:PF00471;Note=ribosomal_l33~ribosomal protein l33;gbkey=misc_feature;locus_tag=GGE_0311 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42162 42168 . + . ID=id-AFQR01000007.1:42162..42168;Dbxref=InterPro:IPR018264;Note=PatternScan:PS00582~ribosomal_l33~ribosomal protein l33%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 42284 42520 . - . ID=gene-GGE_0312;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank CDS 42284 42520 . - 0 ID=cds-EGT82949.1;Parent=gene-GGE_0312;Dbxref=GeneID:1173011,InterPro:IPR001383,PFAM:PF00830,TIGRFAM:TIGR00009,NCBI_GP:EGT82949.1;Name=EGT82949.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmB;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0312;product=50S ribosomal protein L28;protein_id=EGT82949.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42284 42515 . - . ID=id-GGE_0312;Note=Gene3D:2.30.170.40~superfamily:SSF143800~l28p-like;gbkey=misc_feature;gene=rpmB;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42284 42512 . - . ID=id-GGE_0312-2;Note=superfamily%3B label: Ribosomal_L28 superfamily;gbkey=misc_feature;gene=rpmB;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42284 42485 . - . ID=id-GGE_0312-3;Dbxref=InterPro:IPR001383;Note=HAMAP:MF_00373~ribosomal_l28~ribosomal protein l28;gbkey=misc_feature;gene=rpmB;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42284 42458 . - . ID=id-GGE_0312-4;Dbxref=InterPro:IPR001383,TIGRFAM:TIGR00009;Note=l28: ribosomal protein l28~ribosomal protein l28;gbkey=misc_feature;gene=rpmB;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42293 42467 . - . ID=id-GGE_0312-5;Dbxref=InterPro:IPR001383,PFAM:PF00830;Note=ribosomal_l28~ribosomal protein l28;gbkey=misc_feature;gene=rpmB;locus_tag=GGE_0312 GCA_000222085.2|AFQR01000007.1 Genbank gene 42734 43399 . - . ID=gene-GGE_0313;Name=GGE_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank CDS 42734 43399 . - 0 ID=cds-EGT82950.1;Parent=gene-GGE_0313;Dbxref=GeneID:172048112,InterPro:IPR001405,InterPro:IPR010994,InterPro:IPR020891,PFAM:PF04002,TIGRFAM:TIGR00608,NCBI_GP:EGT82950.1;Name=EGT82950.1;Note=CGSHiEE_07200;gbkey=CDS;locus_tag=GGE_0313;product=UPF0758 protein;protein_id=EGT82950.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42734 43397 . - . ID=id-GGE_0313;Note=multi-dom%3B label: PRK00024;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42758 43376 . - . ID=id-GGE_0313-2;Dbxref=InterPro:IPR001405,TIGRFAM:TIGR00608;Note=radc: dna repair protein radc~uncharacterised protein family upf0758;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42767 42974 . - . ID=id-GGE_0313-3;Dbxref=InterPro:IPR010994;Note=superfamily:SSF47781~ruva domain 2-like~ruva domain 2-like;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43028 43103 . - . ID=id-GGE_0313-4;Note=Gene3D:3.40.140.10;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43034 43100 . - . ID=id-GGE_0313-5;Dbxref=InterPro:IPR001405,PFAM:PF04002;Note=duf2466~uncharacterised protein family upf0758;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43046 43073 . - . ID=id-GGE_0313-6;Note=specific~superfamily%3B label: MPN superfamily;gbkey=misc_feature;locus_tag=GGE_0313 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 42752 43244 . + . ID=id-AFQR01000007.1:42752..43244;Dbxref=InterPro:IPR020891;Note=PatternScan:PS01302~upf0758~uncharacterised protein family upf0758%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 43563 44765 . + . ID=gene-GGE_0314;Name=GGE_0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank CDS 43563 44765 . + 0 ID=cds-EGT82951.1;Parent=gene-GGE_0314;Dbxref=GeneID:1169275,InterPro:IPR003382,InterPro:IPR005252,InterPro:IPR007085,PFAM:PF02441,PFAM:PF04127,TIGRFAM:TIGR00521,NCBI_GP:EGT82951.1;Name=EGT82951.1;Note=coaBC;Ontology_term=GO:0015937,GO:0015941,GO:0010181,GO:0003824,GO:0004632,GO:0004633;gbkey=CDS;go_function=FMN binding|0010181||,catalytic activity|0003824||,phosphopantothenate--cysteine ligase activity|0004632||,phosphopantothenoylcysteine decarboxylase activity|0004633||;go_process=coenzyme A biosynthetic process|0015937||,pantothenate catabolic process|0015941||;locus_tag=GGE_0314;product=putative Coenzyme A biosynthesis protein;protein_id=EGT82951.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43563 44757 . + . ID=id-GGE_0314;Note=multi-dom%3B label: PRK05579;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43569 44106 . + . ID=id-GGE_0314-2;Dbxref=InterPro:IPR003382;Note=superfamily:SSF52507~homo-oligomeric flavin-containing cys decarboxylases%2C hfcd~flavoprotein;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43569 44103 . + . ID=id-GGE_0314-3;Dbxref=InterPro:IPR003382;Note=Gene3D:3.40.50.1950~flavoprotein;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43572 44757 . + . ID=id-GGE_0314-4;Note=HMMPanther:PTHR14359:SF6~pantothenate metabolism flavoprotein dfp~HMMPanther:PTHR14359~family not named;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43572 44736 . + . ID=id-GGE_0314-5;Dbxref=InterPro:IPR005252,TIGRFAM:TIGR00521;Note=coabc_dfp: phosphopantothenoylcysteine deca~bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43578 44100 . + . ID=id-GGE_0314-6;Note=superfamily%3B label: Flavoprotein superfamily;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43581 43917 . + . ID=id-GGE_0314-7;Dbxref=InterPro:IPR003382,PFAM:PF02441;Note=flavoprotein~flavoprotein;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44076 44253 . + . ID=id-GGE_0314-8;Dbxref=InterPro:IPR007085;Note=superfamily:SSF102645~coab-like~dna/pantothenate metabolism flavoprotein;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44109 44214 . + . ID=id-GGE_0314-9;Dbxref=InterPro:IPR007085;Note=Gene3D:3.40.50.10300~dna/pantothenate metabolism flavoprotein;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44349 44358 . + . ID=id-GGE_0314-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0314 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 43608 43809 . - . ID=id-AFQR01000007.1:43608..43809;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44081 44090 . - . ID=id-AFQR01000007.1:44081..44090;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44094 44124 . - . ID=id-AFQR01000007.1:44094..44124;Note=superfamily%3B label: DFP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44118 44124 . - . ID=id-AFQR01000007.1:44118..44124;Dbxref=InterPro:IPR007085,PFAM:PF04127;Note=dfp~dna/pantothenate metabolism flavoprotein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44770 44779 . - . ID=id-AFQR01000007.1:44770..44779;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 44813 45268 . + . ID=gene-GGE_0315;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank CDS 44813 45268 . + 0 ID=cds-EGT82952.1;Parent=gene-GGE_0315;Dbxref=GeneID:1169438,InterPro:IPR008180,InterPro:IPR008181,PFAM:PF00692,TIGRFAM:TIGR00576,NCBI_GP:EGT82952.1;Name=EGT82952.1;Ontology_term=GO:0046080,GO:0004170,GO:0016787;gbkey=CDS;gene=dut;go_function=dUTP diphosphatase activity|0004170||,hydrolase activity|0016787||;go_process=dUTP metabolic process|0046080||;locus_tag=GGE_0315;product=putative dUTP pyrophosphatase-like protein;protein_id=EGT82952.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44813 45266 . + . ID=id-GGE_0315;Note=HMMPanther:PTHR11241~family not named~superfamily:SSF51283~dutpase-like;gbkey=misc_feature;gene=dut;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44831 45248 . + . ID=id-GGE_0315-2;Dbxref=InterPro:IPR008181;Note=HAMAP:MF_00116~dutpase_bact~deoxyutp pyrophosphatase%2C dutpase subfamily;gbkey=misc_feature;gene=dut;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44834 45245 . + . ID=id-GGE_0315-3;Dbxref=InterPro:IPR008181,TIGRFAM:TIGR00576;Note=Gene3D:2.70.40.10~dut: dutp diphosphatase~deoxyutp pyrophosphatase%2C dutpase subfamily;gbkey=misc_feature;gene=dut;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44861 45215 . + . ID=id-GGE_0315-4;Dbxref=InterPro:IPR008180,PFAM:PF00692;Note=dutpase~deoxyutp pyrophosphatase;gbkey=misc_feature;gene=dut;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 44897 45095 . + . ID=id-GGE_0315-5;Note=specific~superfamily%3B label: trimeric_dUTPase;gbkey=misc_feature;gene=dut;locus_tag=GGE_0315 GCA_000222085.2|AFQR01000007.1 Genbank gene 45272 45928 . + . ID=gene-GGE_0316;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank CDS 45272 45928 . + 0 ID=cds-EGT82953.1;Parent=gene-GGE_0316;Dbxref=GeneID:1174822,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR015893,PFAM:PF00440,NCBI_GP:EGT82953.1;Name=EGT82953.1;Ontology_term=GO:0016481,GO:0006355,GO:0005515,GO:0003700,GO:0016566;gbkey=CDS;gene=slmA;go_function=protein binding|0005515||,sequence-specific DNA binding transcription factor activity|0003700||,specific transcriptional repressor activity|0016566||;go_process=negative regulation of transcription|0016481||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0316;product=HTH-type protein slmA;protein_id=EGT82953.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45332 45869 . + . ID=id-GGE_0316;Note=HAMAP:MF_01839~hth_type_slma;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45335 45857 . + . ID=id-GGE_0316-2;Note=multi-dom%3B label: slmA;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45359 45827 . + . ID=id-GGE_0316-3;Dbxref=InterPro:IPR015893;Note=Gene3D:1.10.357.10~tetracycline transcriptional regulator%2C tetr-like;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45359 45476 . + . ID=id-GGE_0316-4;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45362 45455 . + . ID=id-GGE_0316-5;Dbxref=InterPro:IPR001647;Note=ProfileScan:PS50977~hth_tetr_2~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45395 45398 . + . ID=id-GGE_0316-6;Note=superfamily%3B label: TetR_N superfamily;gbkey=misc_feature;gene=slmA;locus_tag=GGE_0316 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45365 45416 . - . ID=id-AFQR01000007.1:45365..45416;Dbxref=InterPro:IPR001647;Note=PatternScan:PS01081~hth_tetr_1~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45395 45398 . - . ID=id-AFQR01000007.1:45395..45398;Dbxref=InterPro:IPR001647,PFAM:PF00440;Note=tetr_n~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 45950 46078 . + . ID=gene-GGE_0317;Name=GGE_0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0317 GCA_000222085.2|AFQR01000007.1 Genbank CDS 45950 46078 . + 0 ID=cds-EGT82954.1;Parent=gene-GGE_0317;Dbxref=InterPro:IPR010648,PFAM:PF06794,NCBI_GP:EGT82954.1;Name=EGT82954.1;Note=Hypothetical yehU-like;gbkey=CDS;locus_tag=GGE_0317;product=putative yehU-like protein;protein_id=EGT82954.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45950 46073 . + . ID=id-GGE_0317;Dbxref=InterPro:IPR010648;Note=BlastProDom:PD026997~q4qlv1_haei8_q4qlv1~uncharacterised protein family upf0270;gbkey=misc_feature;locus_tag=GGE_0317 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 45950 46064 . + . ID=id-GGE_0317-2;Dbxref=InterPro:IPR010648,PFAM:PF06794;Note=superfamily~Gene3D:1.10.10.610~uncharacterised protein family upf0270~upf0270~uncharacterised protein family upf0270~superfamily:SSF118001~yehu-like%3B label: UPF0270 superfamily;gbkey=misc_feature;locus_tag=GGE_0317 GCA_000222085.2|AFQR01000007.1 Genbank gene 46185 46862 . + . ID=gene-GGE_0318;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank CDS 46185 46862 . + 0 ID=cds-EGT82955.1;Parent=gene-GGE_0318;Dbxref=GeneID:117485,InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,InterPro:IPR014710,InterPro:IPR018335,InterPro:IPR018488,InterPro:IPR018490,PFAM:PF00027,PFAM:PF00325,NCBI_GP:EGT82955.1;Name=EGT82955.1;Ontology_term=GO:0006355,GO:0045449,GO:0005622,GO:0003677,GO:0003700;gbkey=CDS;gene=crp;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_0318;product=putative cAMP-regulatory protein;protein_id=EGT82955.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46248 46800 . + . ID=id-GGE_0318;Note=multi-dom%3B label: PRK11753;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46257 46791 . + . ID=id-GGE_0318-2;Note=HMMPanther:PTHR24567~family not named;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46257 46575 . + . ID=id-GGE_0318-3;Dbxref=InterPro:IPR018490;Note=superfamily:SSF51206~camp-binding domain-like~cyclic nucleotide-binding-like;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46257 46512 . + . ID=id-GGE_0318-4;Note=specific~superfamily%3B label: CAP_ED;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46263 46566 . + . ID=id-GGE_0318-5;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46296 46458 . + . ID=id-GGE_0318-6;Dbxref=InterPro:IPR000595,PFAM:PF00027;Note=cnmp_binding~cyclic nucleotide-binding domain;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46302 46488 . + . ID=id-GGE_0318-7;Dbxref=InterPro:IPR000595;Note=ProfileScan:PS50042~cnmp_binding_3~cyclic nucleotide-binding domain;gbkey=misc_feature;gene=crp;locus_tag=GGE_0318 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46233 46776 . - . ID=id-AFQR01000007.1:46233..46776;Dbxref=InterPro:IPR001808;Note=FPrintScan:PR00034~hthcrp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46233 46425 . - . ID=id-AFQR01000007.1:46233..46425;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46236 46728 . - . ID=id-AFQR01000007.1:46236..46728;Dbxref=InterPro:IPR001808;Note=FPrintScan:PR00034~hthcrp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46236 46320 . - . ID=id-AFQR01000007.1:46236..46320;Dbxref=InterPro:IPR018488;Note=PatternScan:PS00888~cnmp_binding_1~cyclic nucleotide-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46242 46443 . - . ID=id-AFQR01000007.1:46242..46443;Dbxref=InterPro:IPR018488;Note=PatternScan:PS00889~cnmp_binding_2~cyclic nucleotide-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46257 46734 . - . ID=id-AFQR01000007.1:46257..46734;Dbxref=InterPro:IPR018335;Note=PatternScan:PS00042~hth_crp_1~transcription regulator%2C hth%2C crp-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46281 46728 . - . ID=id-AFQR01000007.1:46281..46728;Dbxref=InterPro:IPR001808,PFAM:PF00325;Note=crp~transcription regulator hth%2C crp;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46374 46650 . - . ID=id-AFQR01000007.1:46374..46650;Note=specific~superfamily%3B label: HTH_CRP;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46389 46647 . - . ID=id-AFQR01000007.1:46389..46647;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46398 46647 . - . ID=id-AFQR01000007.1:46398..46647;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 46404 46644 . - . ID=id-AFQR01000007.1:46404..46644;Dbxref=InterPro:IPR012318;Note=ProfileScan:PS51063~hth_crp_2~helix-turn-helix motif%2C crp-type;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 47233 47742 . - . ID=gene-GGE_0319;Name=GGE_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank CDS 47233 47742 . - 0 ID=cds-EGT82956.1;Parent=gene-GGE_0319;Dbxref=InterPro:IPR010280,PFAM:PF05958,NCBI_GP:EGT82956.1;Name=EGT82956.1;Note=Hypothetical (Uracil-5)-methyltransferase;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;go_function=RNA methyltransferase activity|0008173||;go_process=RNA processing|0006396||;locus_tag=GGE_0319;product=putative Uracil-5-methyltransferase;protein_id=EGT82956.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47233 47740 . - . ID=id-GGE_0319;Note=HMMPanther:PTHR11061:SF2~rna m5u methyltransferase~HMMPanther:PTHR11061~family not named;gbkey=misc_feature;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47254 47704 . - . ID=id-GGE_0319-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47269 47695 . - . ID=id-GGE_0319-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47293 47524 . - . ID=id-GGE_0319-4;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47302 47668 . - . ID=id-GGE_0319-5;Dbxref=InterPro:IPR010280,PFAM:PF05958;Note=trna_u5-meth_tr~(uracil-5)-methyltransferase;gbkey=misc_feature;locus_tag=GGE_0319 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47266 47680 . + . ID=id-AFQR01000007.1:47266..47680;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01231~trma_2~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47329 47530 . + . ID=id-AFQR01000007.1:47329..47530;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01230~trma_1~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47382 47391 . + . ID=id-AFQR01000007.1:47382..47391;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 47832 48099 . - . ID=id-AFQR01000007.1:47832..48099;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 48101 48406 . - . ID=gene-GGE_0320;Name=GGE_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0320 GCA_000222085.2|AFQR01000007.1 Genbank CDS 48101 48406 . - 0 ID=cds-EGT82957.1;Parent=gene-GGE_0320;Dbxref=NCBI_GP:EGT82957.1;Name=EGT82957.1;Note=Hypothetical s-adenosyl-L-methionine-dependent methyltransferase;gbkey=CDS;locus_tag=GGE_0320;product=putative s-adenosyl-L-methionine-dependent methyltransferase;protein_id=EGT82957.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48110 48341 . - . ID=id-GGE_0320;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_0320 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48113 48323 . - . ID=id-GGE_0320-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0320 GCA_000222085.2|AFQR01000007.1 Genbank gene 48403 49455 . - . ID=gene-GGE_0321;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank CDS 48403 49455 . - 0 ID=cds-EGT82958.1;Parent=gene-GGE_0321;Dbxref=GeneID:81336026,InterPro:IPR001764,InterPro:IPR017853,InterPro:IPR022956,PFAM:PF00933,NCBI_GP:EGT82958.1;Name=EGT82958.1;Ontology_term=GO:0005975,GO:0004563,GO:0004553;gbkey=CDS;gene=nagZ;go_function=beta-N-acetylhexosaminidase activity|0004563||,hydrolase activity hydrolyzing O-glycosyl compounds|0004553||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0321;product=Beta-hexosaminidase;protein_id=EGT82958.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48403 49432 . - . ID=id-GGE_0321;Note=superfamily%3B label: Glyco_hydro_3 superfamily;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48403 49282 . - . ID=id-GGE_0321-2;Dbxref=InterPro:IPR017853;Note=superfamily:SSF51445~(trans)glycosidases~glycoside hydrolase%2C superfamily;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48412 49423 . - . ID=id-GGE_0321-3;Dbxref=InterPro:IPR022956;Note=HAMAP:MF_00364~nagz~beta-hexosaminidase;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48412 49276 . - . ID=id-GGE_0321-4;Dbxref=InterPro:IPR001764;Note=Gene3D:3.20.20.300~glycoside hydrolase%2C family 3;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48556 49084 . - . ID=id-GGE_0321-5;Dbxref=InterPro:IPR001764,PFAM:PF00933;Note=glyco_hydro_3~glycoside hydrolase%2C family 3;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49027 49036 . - . ID=id-GGE_0321-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nagZ;locus_tag=GGE_0321 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 48552 48561 . + . ID=id-AFQR01000007.1:48552..48561;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 49459 49809 . - . ID=gene-GGE_0322;Name=GGE_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0322 GCA_000222085.2|AFQR01000007.1 Genbank CDS 49459 49809 . - 0 ID=cds-EGT82959.1;Parent=gene-GGE_0322;Dbxref=InterPro:IPR010824,PFAM:PF07233,NCBI_GP:EGT82959.1;Name=EGT82959.1;Note=HI_0960;gbkey=CDS;locus_tag=GGE_0322;product=putative lipoprotein;protein_id=EGT82959.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49459 49507 . - . ID=id-GGE_0322;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0322 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49477 49501 . - . ID=id-GGE_0322-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0322 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49540 49729 . - . ID=id-GGE_0322-3;Note=specific~superfamily%3B label: DUF1425;gbkey=misc_feature;locus_tag=GGE_0322 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49597 49672 . - . ID=id-GGE_0322-4;Dbxref=InterPro:IPR010824,PFAM:PF07233;Note=duf1425~protein of unknown function duf1425;gbkey=misc_feature;locus_tag=GGE_0322 GCA_000222085.2|AFQR01000007.1 Genbank gene 49809 50159 . - . ID=gene-GGE_0323;Name=GGE_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank CDS 49809 50159 . - 0 ID=cds-EGT82960.1;Parent=gene-GGE_0323;Dbxref=GeneID:1175656,InterPro:IPR001310,InterPro:IPR011146,InterPro:IPR011151,InterPro:IPR019808,PFAM:PF01230,NCBI_GP:EGT82960.1;Name=EGT82960.1;Note=HI_0961;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||;locus_tag=GGE_0323;product=HIT-like protein;protein_id=EGT82960.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49809 50130 . - . ID=id-GGE_0323;Dbxref=InterPro:IPR001310;Note=HMMPanther:PTHR23089~family not named~histidine triad (hit) protein;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49809 50127 . - . ID=id-GGE_0323-2;Dbxref=InterPro:IPR011146;Note=superfamily:SSF54197~hit-like~histidine triad-like motif;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49818 50133 . - . ID=id-GGE_0323-3;Dbxref=InterPro:IPR011151;Note=Gene3D:3.30.428.10~histidine triad motif;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49821 50121 . - . ID=id-GGE_0323-4;Note=specific~superfamily%3B label: HIT_like superfamily;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49827 50139 . - . ID=id-GGE_0323-5;Dbxref=InterPro:IPR001310;Note=ProfileScan:PS51084~hit_2~histidine triad (hit) protein;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49827 49860 . - . ID=id-GGE_0323-6;Dbxref=InterPro:IPR001310;Note=FPrintScan:PR00332~histriad~histidine triad (hit) protein;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49845 50100 . - . ID=id-GGE_0323-7;Dbxref=InterPro:IPR001310,PFAM:PF01230;Note=hit~histidine triad (hit) protein;gbkey=misc_feature;locus_tag=GGE_0323 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49842 50094 . + . ID=id-AFQR01000007.1:49842..50094;Dbxref=InterPro:IPR001310;Note=FPrintScan:PR00332~histriad~histidine triad (hit) protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49866 50073 . + . ID=id-AFQR01000007.1:49866..50073;Dbxref=InterPro:IPR019808;Note=PatternScan:PS00892~hit_1~histidine triad%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 49866 49890 . + . ID=id-AFQR01000007.1:49866..49890;Dbxref=InterPro:IPR001310;Note=FPrintScan:PR00332~histriad~histidine triad (hit) protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50176 50185 . + . ID=id-AFQR01000007.1:50176..50185;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50192 50201 . - . ID=id-AFQR01000007.1:50192..50201;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 50238 52106 . - . ID=gene-GGE_0324;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=GGE_0324 GCA_000222085.2|AFQR01000007.1 Genbank CDS 50238 52106 . - 0 ID=cds-EGT82961.1;Parent=gene-GGE_0324;Dbxref=InterPro:IPR000297,InterPro:IPR008880,InterPro:IPR023058,PFAM:PF00639,NCBI_GP:EGT82961.1;Name=EGT82961.1;Ontology_term=GO:0006457,GO:0015031,GO:0016853;gbkey=CDS;gene=ppiD;go_function=isomerase activity|0016853||;go_process=protein folding|0006457||,protein transport|0015031||;locus_tag=GGE_0324;product=Peptidyl-prolyl cis-trans isomerase D;protein_id=EGT82961.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50250 51693 . - . ID=id-GGE_0324;Note=HMMPanther:PTHR10657:SF0~peptidyl-prolyl cis-trans isomerase~HMMPanther:PTHR10657~peptidyl-prolyl cis-trans isomerase;gbkey=misc_feature;gene=ppiD;locus_tag=GGE_0324 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50268 52044 . - . ID=id-GGE_0324-2;Note=multi-dom%3B label: PRK10788;gbkey=misc_feature;gene=ppiD;locus_tag=GGE_0324 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50289 50298 . - . ID=id-GGE_0324-3;Note=transmembrane_regions;gbkey=misc_feature;gene=ppiD;locus_tag=GGE_0324 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50355 50841 . - . ID=id-GGE_0324-4;Dbxref=InterPro:IPR008880;Note=superfamily:SSF109998~triger factor/sura peptide-binding domain-like~trigger factor%2C bacterial;gbkey=misc_feature;gene=ppiD;locus_tag=GGE_0324 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50304 51696 . + . ID=id-AFQR01000007.1:50304..51696;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50304 51123 . + . ID=id-AFQR01000007.1:50304..51123;Dbxref=InterPro:IPR023058;Note=PatternScan:PS01096~ppic_ppiase_1~peptidyl-prolyl cis-trans isomerase%2C ppic-type%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50469 51075 . + . ID=id-AFQR01000007.1:50469..51075;Dbxref=InterPro:IPR000297,PFAM:PF00639;Note=rotamase~peptidyl-prolyl cis-trans isomerase%2C ppic-type;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50490 51057 . + . ID=id-AFQR01000007.1:50490..51057;Note=superfamily%3B label: Rotamase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50499 51048 . + . ID=id-AFQR01000007.1:50499..51048;Dbxref=InterPro:IPR000297;Note=ProfileScan:PS50198~ppic_ppiase_2~peptidyl-prolyl cis-trans isomerase%2C ppic-type;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50562 51042 . + . ID=id-AFQR01000007.1:50562..51042;Note=Gene3D:3.10.50.40;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 50634 50913 . + . ID=id-AFQR01000007.1:50634..50913;Note=superfamily:SSF54534~fkbp-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 52298 53683 . - . ID=gene-GGE_0325;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank CDS 52298 53683 . - 0 ID=cds-EGT82962.1;Parent=gene-GGE_0325;Dbxref=GeneID:166200480,InterPro:IPR002917,InterPro:IPR004520,InterPro:IPR005225,InterPro:IPR018948,PFAM:PF01926,PFAM:PF10396,TIGRFAM:TIGR00231,TIGRFAM:TIGR00450,NCBI_GP:EGT82962.1;Name=EGT82962.1;Ontology_term=GO:0006400,GO:0005622,GO:0005525,GO:0003924;gbkey=CDS;gene=mnmE;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,GTPase activity|0003924||;go_process=tRNA modification|0006400||;locus_tag=GGE_0325;product=tRNA modification GTPase mnmE;protein_id=EGT82962.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52298 53681 . - . ID=id-GGE_0325;Note=HMMPanther:PTHR11649:SF30~subfamily not named~HMMPanther:PTHR11649~family not named;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52322 53660 . - . ID=id-GGE_0325-2;Note=multi-dom%3B label: trmE;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52325 52655 . - . ID=id-GGE_0325-3;Dbxref=InterPro:IPR018948;Note=Gene3D:3.30.1360.120~gtp-binding protein trme;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52334 53648 . - . ID=id-GGE_0325-4;Dbxref=InterPro:IPR004520;Note=HAMAP:MF_00379~gtpase_mnme~trna modification gtpase trme;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52337 52643 . - . ID=id-GGE_0325-5;Dbxref=InterPro:IPR018948,PFAM:PF10396;Note=superfamily~trme_n~gtp-binding protein trme%3B label: TrmE_N superfamily;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52352 53630 . - . ID=id-GGE_0325-6;Dbxref=InterPro:IPR004520,TIGRFAM:TIGR00450;Note=mnme_trme_thdf: trna modification gtpa~trna modification gtpase trme;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52532 53210 . - . ID=id-GGE_0325-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52682 53300 . - . ID=id-GGE_0325-8;Note=superfamily:SSF116878~trme connector domain;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52710 52719 . - . ID=id-GGE_0325-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mnmE;locus_tag=GGE_0325 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52520 53462 . + . ID=id-AFQR01000007.1:52520..53462;Note=Gene3D:1.20.120.430;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52625 53003 . + . ID=id-AFQR01000007.1:52625..53003;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52658 52784 . + . ID=id-AFQR01000007.1:52658..52784;Note=superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52775 52982 . + . ID=id-AFQR01000007.1:52775..52982;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52781 52961 . + . ID=id-AFQR01000007.1:52781..52961;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein d~small gtp-binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 52784 52967 . + . ID=id-AFQR01000007.1:52784..52967;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 53817 55445 . - . ID=gene-GGE_0326;Name=oxaA;gbkey=Gene;gene=oxaA;gene_biotype=protein_coding;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank CDS 53817 55445 . - 0 ID=cds-EGT82963.1;Parent=gene-GGE_0326;Dbxref=GeneID:81335986,InterPro:IPR001708,InterPro:IPR019998,PFAM:PF02096,TIGRFAM:TIGR03592,TIGRFAM:TIGR03593,NCBI_GP:EGT82963.1;Name=EGT82963.1;Ontology_term=GO:0051205,GO:0016021;gbkey=CDS;gene=oxaA;go_component=integral to membrane|0016021||;go_process=protein insertion into membrane|0051205||;locus_tag=GGE_0326;product=Inner membrane protein oxaA;protein_id=EGT82963.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53817 55443 . - . ID=id-GGE_0326;Note=multi-dom%3B label: PRK01318;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53823 55425 . - . ID=id-GGE_0326-2;Dbxref=InterPro:IPR001708;Note=HMMPanther:PTHR12428:SF11~oxaa 1%2C 2~HMMPanther:PTHR12428~family not named~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53823 53883 . - . ID=id-GGE_0326-3;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53826 54858 . - . ID=id-GGE_0326-4;Dbxref=InterPro:IPR019998,TIGRFAM:TIGR03593;Note=yidc_nterm: membrane protein insertas~membrane insertion protein%2C oxaa/yidc%2C bacterial;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53829 55386 . - . ID=id-GGE_0326-5;Dbxref=InterPro:IPR019998;Note=HAMAP:MF_01810~oxaa_type1~membrane insertion protein%2C oxaa/yidc%2C bacterial;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53838 53871 . - . ID=id-GGE_0326-6;Note=transmembrane_regions;gbkey=misc_feature;gene=oxaA;locus_tag=GGE_0326 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53865 55212 . + . ID=id-AFQR01000007.1:53865..55212;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR01900~yidcprotein~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53865 54558 . + . ID=id-AFQR01000007.1:53865..54558;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53868 54825 . + . ID=id-AFQR01000007.1:53868..54825;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR01900~yidcprotein~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53874 54459 . + . ID=id-AFQR01000007.1:53874..54459;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53880 54780 . + . ID=id-AFQR01000007.1:53880..54780;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53880 54300 . + . ID=id-AFQR01000007.1:53880..54300;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53880 53940 . + . ID=id-AFQR01000007.1:53880..53940;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53883 54033 . + . ID=id-AFQR01000007.1:53883..54033;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53886 55299 . + . ID=id-AFQR01000007.1:53886..55299;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53886 55194 . + . ID=id-AFQR01000007.1:53886..55194;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53886 55065 . + . ID=id-AFQR01000007.1:53886..55065;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53886 54858 . + . ID=id-AFQR01000007.1:53886..54858;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53889 55305 . + . ID=id-AFQR01000007.1:53889..55305;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53889 55053 . + . ID=id-AFQR01000007.1:53889..55053;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR00701~60kdinnermp~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 53892 55272 . + . ID=id-AFQR01000007.1:53892..55272;Dbxref=InterPro:IPR001708;Note=FPrintScan:PR01900~yidcprotein~membrane insertion protein%2C oxaa/yidc;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 54360 54867 . + . ID=id-AFQR01000007.1:54360..54867;Dbxref=InterPro:IPR001708,PFAM:PF02096,TIGRFAM:TIGR03592;Note=superfamily~60kd_imp~membrane insertion protein%2C oxaa/yidc~yidc_oxa1_cterm: membrane protein ins~membrane insertion protein%2C oxaa/yidc%3B label: 60KD_IMP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 55445 55705 . - . ID=gene-GGE_0327;Name=GGE_0327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank CDS 55445 55705 . - 0 ID=cds-EGT82964.1;Parent=gene-GGE_0327;Dbxref=InterPro:IPR002696,PFAM:PF01809,TIGRFAM:TIGR00278,NCBI_GP:EGT82964.1;Name=EGT82964.1;Note=CGSHiGG_08600;gbkey=CDS;locus_tag=GGE_0327;product=UPF0161 protein;protein_id=EGT82964.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55445 55691 . - . ID=id-GGE_0327;Note=superfamily%3B label: DUF37 superfamily;gbkey=misc_feature;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55469 55652 . - . ID=id-GGE_0327-2;Dbxref=InterPro:IPR002696;Note=HAMAP:MF_00386~upf0161~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55475 55643 . - . ID=id-GGE_0327-3;Dbxref=InterPro:IPR002696,PFAM:PF01809;Note=duf37~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55481 55670 . - . ID=id-GGE_0327-4;Dbxref=InterPro:IPR002696,TIGRFAM:TIGR00278;Note=tigr00278: conserved hypothetical protein y~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55514 55604 . - . ID=id-GGE_0327-5;Dbxref=InterPro:IPR002696;Note=BlastProDom:PD004225~q4qlr1_haei8_q4qlr1~protein of unknown function duf37;gbkey=misc_feature;locus_tag=GGE_0327 GCA_000222085.2|AFQR01000007.1 Genbank gene 55669 55995 . - . ID=gene-GGE_0328;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank CDS 55669 55995 . - 0 ID=cds-EGT82965.1;Parent=gene-GGE_0328;Dbxref=GeneID:166226720,InterPro:IPR000100,InterPro:IPR014721,InterPro:IPR020539,InterPro:IPR020568,PFAM:PF00825,TIGRFAM:TIGR00188,NCBI_GP:EGT82965.1;Name=EGT82965.1;Ontology_term=GO:0008033,GO:0004526,GO:0000049;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||,tRNA binding|0000049||;go_process=tRNA processing|0008033||;locus_tag=GGE_0328;product=Ribonuclease P protein component;protein_id=EGT82965.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55669 55984 . - . ID=id-GGE_0328;Dbxref=InterPro:IPR000100,TIGRFAM:TIGR00188;Note=rnpa: ribonuclease p protein component~ribonuclease p;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55669 55981 . - . ID=id-GGE_0328-2;Dbxref=InterPro:IPR000100,InterPro:IPR014721;Note=Gene3D:3.30.230.10~ribosomal protein s5 domain 2-type fold%2C subgroup~HAMAP:MF_00227~rnase_p~ribonuclease p;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55669 55978 . - . ID=id-GGE_0328-3;Note=superfamily%3B label: Ribonuclease_P superfamily;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55669 55972 . - . ID=id-GGE_0328-4;Dbxref=InterPro:IPR020568;Note=superfamily:SSF54211~ribosomal protein s5 domain 2-like~ribosomal protein s5 domain 2-type fold;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55669 55969 . - . ID=id-GGE_0328-5;Dbxref=InterPro:IPR000100,PFAM:PF00825;Note=ribonuclease_p~ribonuclease p;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55690 55912 . - . ID=id-GGE_0328-6;Dbxref=InterPro:IPR000100;Note=BlastProDom:PD003629~q4qlr2_haei8_q4qlr2~ribonuclease p;gbkey=misc_feature;gene=rnpA;locus_tag=GGE_0328 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 55714 55804 . + . ID=id-AFQR01000007.1:55714..55804;Dbxref=InterPro:IPR020539;Note=PatternScan:PS00648~ribonuclease_p~ribonuclease p%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 56041 56175 . - . ID=gene-GGE_0329;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=GGE_0329 GCA_000222085.2|AFQR01000007.1 Genbank CDS 56041 56175 . - 0 ID=cds-EGT82966.1;Parent=gene-GGE_0329;Dbxref=InterPro:IPR000271,InterPro:IPR020939,PFAM:PF00468,TIGRFAM:TIGR01030,NCBI_GP:EGT82966.1;Name=EGT82966.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmH;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0329;product=50S ribosomal protein L34;protein_id=EGT82966.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56041 56173 . - . ID=id-GGE_0329;Dbxref=InterPro:IPR000271,PFAM:PF00468,TIGRFAM:TIGR01030;Note=superfamily~ribosomal_l34~ribosomal protein l34~HMMPanther:PTHR14503~family not named~rpmh_bact: ribosomal protein l34~ribosomal protein l34~HAMAP:MF_00391~ribosomal_l34~ribosomal protein l34%3B label: Ribosomal_L34 superfamily;gbkey=misc_feature;gene=rpmH;locus_tag=GGE_0329 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56041 56161 . - . ID=id-GGE_0329-2;Dbxref=InterPro:IPR000271;Note=BlastProDom:PD003101~rl34_mansm_q65vb9~ribosomal protein l34;gbkey=misc_feature;gene=rpmH;locus_tag=GGE_0329 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56047 56101 . - . ID=id-GGE_0329-3;Dbxref=InterPro:IPR020939;Note=PatternScan:PS00784~ribosomal_l34~ribosomal protein l34%2C conserved site;gbkey=misc_feature;gene=rpmH;locus_tag=GGE_0329 GCA_000222085.2|AFQR01000007.1 Genbank gene 56357 57802 . - . ID=gene-GGE_0330;Name=GGE_0330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0330 GCA_000222085.2|AFQR01000007.1 Genbank CDS 56357 57802 . - 0 ID=cds-EGT82967.1;Parent=gene-GGE_0330;Dbxref=GeneID:301169722,InterPro:IPR007655,PFAM:PF04575,NCBI_GP:EGT82967.1;Name=EGT82967.1;Note=CBW29323;gbkey=CDS;locus_tag=GGE_0330;product=putative tPR-like protein;protein_id=EGT82967.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56381 56393 . - . ID=id-GGE_0330;Note=seg;gbkey=misc_feature;locus_tag=GGE_0330 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56543 56699 . - . ID=id-GGE_0330-2;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;locus_tag=GGE_0330 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56882 57278 . - . ID=id-GGE_0330-3;Note=superfamily%3B label: DUF560 superfamily;gbkey=misc_feature;locus_tag=GGE_0330 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56885 57275 . - . ID=id-GGE_0330-4;Dbxref=InterPro:IPR007655,PFAM:PF04575;Note=duf560~protein of unknown function duf560;gbkey=misc_feature;locus_tag=GGE_0330 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56390 56957 . + . ID=id-AFQR01000007.1:56390..56957;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 56582 56594 . + . ID=id-AFQR01000007.1:56582..56594;Note=multi-dom%3B label: COG4783;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 57900 59777 . + . ID=gene-GGE_0331;Name=GGE_0331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank CDS 57900 59777 . + 0 ID=cds-EGT82968.1;Parent=gene-GGE_0331;Dbxref=GeneID:16272933,InterPro:IPR001677,PFAM:PF01298,NCBI_GP:EGT82968.1;Name=EGT82968.1;Note=NP_439158;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0331;product=transferrin-binding protein 2;protein_id=EGT82968.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57900 59772 . + . ID=id-GGE_0331;Note=VFDB hit~VFDB:VFG0339;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57900 59760 . + . ID=id-GGE_0331-2;Dbxref=InterPro:IPR001677,PFAM:PF01298;Note=lipoprotein_5~solute-binding protein%2C transferrin-binding like protein;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57900 57954 . + . ID=id-GGE_0331-3;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57918 57978 . + . ID=id-GGE_0331-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57996 59568 . + . ID=id-GGE_0331-5;Note=superfamily%3B label: Lipoprotein_5 superfamily;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 58287 58503 . + . ID=id-GGE_0331-6;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature;locus_tag=GGE_0331 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57936 58359 . - . ID=id-AFQR01000007.1:57936..58359;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57945 59328 . - . ID=id-AFQR01000007.1:57945..59328;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57966 58950 . - . ID=id-AFQR01000007.1:57966..58950;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 57981 59664 . - . ID=id-AFQR01000007.1:57981..59664;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 58524 59136 . - . ID=id-AFQR01000007.1:58524..59136;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 59791 62475 . + . ID=gene-GGE_0332;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank CDS 59791 62475 . + 0 ID=cds-EGT82969.1;Parent=gene-GGE_0332;Dbxref=InterPro:IPR000531,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR010948,InterPro:IPR010949,InterPro:IPR012910,PFAM:PF00593,PFAM:PF07715,TIGRFAM:TIGR01776,TIGRFAM:TIGR01786,NCBI_GP:EGT82969.1;Name=EGT82969.1;Ontology_term=GO:0006810,GO:0016020,GO:0019867,GO:0004872,GO:0005215;gbkey=CDS;gene=tbpA;go_component=membrane|0016020||,outer membrane|0019867||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0332;product=Putative transferrin-binding protein 1;protein_id=EGT82969.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59791 62473 . + . ID=id-GGE_0332;Dbxref=InterPro:IPR010948,TIGRFAM:TIGR01776;Note=multi-dom~tonb-tbp-lbp: tonb-dependent lactofer~tonb-dependent lactoferrin/transferrin receptor%3B label: TonB-tbp-lbp;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59791 59914 . + . ID=id-GGE_0332-2;Dbxref=InterPro:IPR010916;Note=PatternScan:PS00430~tonb_dependent_rec_1~tonb box%2C conserved site;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59863 62475 . + . ID=id-GGE_0332-3;Note=VFDB hit~VFDB:VFG0338;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59875 60214 . + . ID=id-GGE_0332-4;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59893 62374 . + . ID=id-GGE_0332-5;Dbxref=InterPro:IPR010949,TIGRFAM:TIGR01786;Note=tonb-hemlactrns: tonb-dependent hemog~tonb-dependent haemoglobin/transferrin/lactoferrin receptor~superfamily:SSF56935~porins;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59971 60346 . + . ID=id-GGE_0332-6;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59971 60109 . + . ID=id-GGE_0332-7;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 61446 61455 . + . ID=id-GGE_0332-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tbpA;locus_tag=GGE_0332 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59824 61360 . - . ID=id-AFQR01000007.1:59824..61360;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59827 61873 . - . ID=id-AFQR01000007.1:59827..61873;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 59845 62422 . - . ID=id-AFQR01000007.1:59845..62422;Dbxref=InterPro:IPR010917;Note=PatternScan:PS01156~tonb_dependent_rec_2~tonb-dependent receptor%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 60658 61606 . - . ID=id-AFQR01000007.1:60658..61606;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 60796 61471 . - . ID=id-AFQR01000007.1:60796..61471;Note=specific~superfamily%3B label: ligand_gated_channel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 60883 61384 . - . ID=id-AFQR01000007.1:60883..61384;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62625 62634 . - . ID=id-AFQR01000007.1:62625..62634;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 62667 64031 . + . ID=gene-GGE_0333;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank CDS 62667 64031 . + 0 ID=cds-EGT82970.1;Parent=gene-GGE_0333;Dbxref=GeneID:1169364,InterPro:IPR001957,InterPro:IPR010921,InterPro:IPR013159,InterPro:IPR013317,InterPro:IPR018312,InterPro:IPR020591,PFAM:PF00308,PFAM:PF08299,TIGRFAM:TIGR00362,NCBI_GP:EGT82970.1;Name=EGT82970.1;Ontology_term=GO:0006270,GO:0006275,GO:0005524,GO:0003677,GO:0003688,GO:0043565;gbkey=CDS;gene=dnaA;go_function=ATP binding|0005524||,DNA binding|0003677||,DNA replication origin binding|0003688||,sequence-specific DNA binding|0043565||;go_process=DNA-dependent DNA replication initiation|0006270||,regulation of DNA replication|0006275||;locus_tag=GGE_0333;product=Chromosomal replication initiator protein dnaA;protein_id=EGT82970.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62673 64026 . + . ID=id-GGE_0333;Note=multi-dom%3B label: dnaA;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62679 64017 . + . ID=id-GGE_0333-2;Dbxref=InterPro:IPR001957;Note=HAMAP:MF_00377~dnaa_bact~chromosomal replication control%2C initiator dnaa;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62688 64005 . + . ID=id-GGE_0333-3;Dbxref=InterPro:IPR001957,TIGRFAM:TIGR00362;Note=dnaa: chromosomal replication initiator prot~chromosomal replication control%2C initiator dnaa;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62964 62973 . + . ID=id-GGE_0333-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62994 63195 . + . ID=id-GGE_0333-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 63018 63321 . + . ID=id-GGE_0333-6;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 63024 63324 . + . ID=id-GGE_0333-7;Dbxref=InterPro:IPR013317,PFAM:PF00308;Note=bac_dnaa~chromosomal replication control%2C initiator (dnaa)/regulator (hda);gbkey=misc_feature;gene=dnaA;locus_tag=GGE_0333 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62709 63141 . - . ID=id-AFQR01000007.1:62709..63141;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62712 63318 . - . ID=id-AFQR01000007.1:62712..63318;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62712 63222 . - . ID=id-AFQR01000007.1:62712..63222;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62724 63906 . - . ID=id-AFQR01000007.1:62724..63906;Dbxref=InterPro:IPR018312;Note=PatternScan:PS01008~dnaa~chromosomal replication control%2C initiator dnaa%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62727 63903 . - . ID=id-AFQR01000007.1:62727..63903;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62730 63126 . - . ID=id-AFQR01000007.1:62730..63126;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62733 63609 . - . ID=id-AFQR01000007.1:62733..63609;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62751 63420 . - . ID=id-AFQR01000007.1:62751..63420;Dbxref=InterPro:IPR020591;Note=FPrintScan:PR00051~dnaa~chromosomal replication control%2C initiator dnaa-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62871 63525 . - . ID=id-AFQR01000007.1:62871..63525;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62874 63756 . - . ID=id-AFQR01000007.1:62874..63756;Dbxref=InterPro:IPR013159,PFAM:PF08299;Note=bac_dnaa_c~chromosomal replication initiator%2C dnaa c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62934 63759 . - . ID=id-AFQR01000007.1:62934..63759;Note=specific~superfamily%3B label: Bac_DnaA_C;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62964 63729 . - . ID=id-AFQR01000007.1:62964..63729;Dbxref=InterPro:IPR013159;Note=Gene3D:1.10.1750.10~chromosomal replication initiator%2C dnaa c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 62985 63714 . - . ID=id-AFQR01000007.1:62985..63714;Dbxref=InterPro:IPR010921;Note=superfamily:SSF48295~trpr-like~trp repressor/replication initiator;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 63078 63315 . - . ID=id-AFQR01000007.1:63078..63315;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 63078 63093 . - . ID=id-AFQR01000007.1:63078..63093;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 64044 65144 . + . ID=gene-GGE_0334;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank CDS 64044 65144 . + 0 ID=cds-EGT82971.1;Parent=gene-GGE_0334;Dbxref=GeneID:1169393,InterPro:IPR001001,InterPro:IPR022634,InterPro:IPR022635,InterPro:IPR022637,PFAM:PF00712,PFAM:PF02767,PFAM:PF02768,TIGRFAM:TIGR00663,NCBI_GP:EGT82971.1;Name=EGT82971.1;Ontology_term=GO:0006260,GO:0009360,GO:0008408,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||;go_function=3'-5' exonuclease activity|0008408||,DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_0334;product=DNA polymerase III subunit beta;protein_id=EGT82971.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64044 65142 . + . ID=id-GGE_0334;Dbxref=InterPro:IPR001001,TIGRFAM:TIGR00663;Note=multi-dom~dnan: dna polymerase iii%2C beta subunit~dna polymerase iii%2C beta chain%3B label: PRK05643;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64044 65139 . + . ID=id-GGE_0334-2;Note=specific~superfamily%3B label: beta_clamp;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64044 64407 . + . ID=id-GGE_0334-3;Dbxref=InterPro:IPR001001;Note=Gene3D:3.10.150.10~dna polymerase iii%2C beta chain;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64044 64401 . + . ID=id-GGE_0334-4;Dbxref=InterPro:IPR022634,PFAM:PF00712;Note=dna_pol3_beta~dna polymerase iii%2C beta chain~superfamily:SSF55979~dna clamp;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64410 64425 . + . ID=id-GGE_0334-5;Dbxref=InterPro:IPR001001;Note=Gene3D:3.10.150.10~dna polymerase iii%2C beta chain;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64410 64413 . + . ID=id-GGE_0334-6;Note=superfamily:SSF55979~dna clamp;gbkey=misc_feature;gene=dnaN;locus_tag=GGE_0334 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64077 64203 . - . ID=id-AFQR01000007.1:64077..64203;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64389 64431 . - . ID=id-AFQR01000007.1:64389..64431;Dbxref=InterPro:IPR022637,PFAM:PF02767;Note=dna_pol3_beta_2~dna polymerase iii%2C beta chain%2C central;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64398 64791 . - . ID=id-AFQR01000007.1:64398..64791;Dbxref=InterPro:IPR001001;Note=Gene3D:3.10.150.10~dna polymerase iii%2C beta chain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64407 64779 . - . ID=id-AFQR01000007.1:64407..64779;Dbxref=InterPro:IPR022635,PFAM:PF02768;Note=dna_pol3_beta_3~dna polymerase iii%2C beta chain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 64410 64779 . - . ID=id-AFQR01000007.1:64410..64779;Note=superfamily:SSF55979~dna clamp;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 65146 66225 . + . ID=gene-GGE_0335;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank CDS 65146 66225 . + 0 ID=cds-EGT82972.1;Parent=gene-GGE_0335;Dbxref=GeneID:81335995,InterPro:IPR001238,InterPro:IPR003395,InterPro:IPR018078,PFAM:PF02463,TIGRFAM:TIGR00611,NCBI_GP:EGT82972.1;Name=EGT82972.1;Ontology_term=GO:0006281,GO:0005694,GO:0005524,GO:0003697;gbkey=CDS;gene=recF;go_component=chromosome|0005694||;go_function=ATP binding|0005524||,single-stranded DNA binding|0003697||;go_process=DNA repair|0006281||;locus_tag=GGE_0335;product=DNA replication and repair protein recF;protein_id=EGT82972.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65146 66223 . + . ID=id-GGE_0335;Dbxref=InterPro:IPR001238;Note=HAMAP:MF_00365~recf~dna-binding%2C recf;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65146 66217 . + . ID=id-GGE_0335-2;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: recF;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65146 66211 . + . ID=id-GGE_0335-3;Dbxref=InterPro:IPR001238,TIGRFAM:TIGR00611;Note=recf: dna replication and repair protein rec~dna-binding%2C recf;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65146 65848 . + . ID=id-GGE_0335-4;Note=HMMPanther:PTHR18937:SF15~subfamily not named~HMMPanther:PTHR18937~family not named;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65146 65632 . + . ID=id-GGE_0335-5;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65155 66202 . + . ID=id-GGE_0335-6;Dbxref=InterPro:IPR003395,PFAM:PF02463;Note=smc_n~recf/recn/smc;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65155 65635 . + . ID=id-GGE_0335-7;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65302 65311 . + . ID=id-GGE_0335-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=recF;locus_tag=GGE_0335 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65203 66040 . - . ID=id-AFQR01000007.1:65203..66040;Dbxref=InterPro:IPR018078;Note=PatternScan:PS00618~recf_2~dna-binding%2C recf%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65209 65497 . - . ID=id-AFQR01000007.1:65209..65497;Dbxref=InterPro:IPR018078;Note=PatternScan:PS00617~recf_1~dna-binding%2C recf%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65530 65833 . - . ID=id-AFQR01000007.1:65530..65833;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 65569 65743 . - . ID=id-AFQR01000007.1:65569..65743;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66228 66237 . + . ID=id-AFQR01000007.1:66228..66237;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 66467 70126 . + . ID=gene-GGE_0336;Name=GGE_0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank CDS 66467 70126 . + 0 ID=cds-EGT82973.1;Parent=gene-GGE_0336;Dbxref=InterPro:IPR000710,InterPro:IPR004899,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF02395,PFAM:PF03212,NCBI_GP:EGT82973.1;Name=EGT82973.1;Note=Hypothetical peptidase S6%2C IgA endopeptidase;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0336;product=putative peptidase S6%2C IgA endopeptidase;protein_id=EGT82973.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66467 69429 . + . ID=id-GGE_0336;Note=VFDB hit~VFDB:VFG0337;gbkey=misc_feature;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66518 68984 . + . ID=id-GGE_0336-2;Dbxref=InterPro:IPR000710,PFAM:PF02395;Note=peptidase_s6~peptidase s6%2C iga endopeptidase;gbkey=misc_feature;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66545 68960 . + . ID=id-GGE_0336-3;Note=multi-dom%3B label: Peptidase_S6;gbkey=misc_feature;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 67712 68177 . + . ID=id-GGE_0336-4;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 67859 68036 . + . ID=id-GGE_0336-5;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature;locus_tag=GGE_0336 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66497 68501 . - . ID=id-AFQR01000007.1:66497..68501;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66503 68132 . - . ID=id-AFQR01000007.1:66503..68132;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66503 67508 . - . ID=id-AFQR01000007.1:66503..67508;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66512 69344 . - . ID=id-AFQR01000007.1:66512..69344;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66512 68645 . - . ID=id-AFQR01000007.1:66512..68645;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66521 68381 . - . ID=id-AFQR01000007.1:66521..68381;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66524 67304 . - . ID=id-AFQR01000007.1:66524..67304;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66527 68813 . - . ID=id-AFQR01000007.1:66527..68813;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66530 66941 . - . ID=id-AFQR01000007.1:66530..66941;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66530 66566 . - . ID=id-AFQR01000007.1:66530..66566;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66536 68519 . - . ID=id-AFQR01000007.1:66536..68519;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66536 68450 . - . ID=id-AFQR01000007.1:66536..68450;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66785 69785 . - . ID=id-AFQR01000007.1:66785..69785;Note=multi-dom%3B label: ftsN;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 66827 69044 . - . ID=id-AFQR01000007.1:66827..69044;Dbxref=InterPro:IPR004899,PFAM:PF03212;Note=pertactin~pertactin%2C central region;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 67157 68729 . - . ID=id-AFQR01000007.1:67157..68729;Note=specific~superfamily%3B label: PL1_Passenger_AT;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 67202 68894 . - . ID=id-AFQR01000007.1:67202..68894;Note=HMMPanther:PTHR12338:SF3~subfamily not named~HMMPanther:PTHR12338~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 68669 68678 . - . ID=id-AFQR01000007.1:68669..68678;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 70111 71322 . + . ID=gene-GGE_0337;Name=GGE_0337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank CDS 70111 71322 . + 0 ID=cds-EGT82974.1;Parent=gene-GGE_0337;Dbxref=InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011250,PFAM:PF03797,TIGRFAM:TIGR01414,NCBI_GP:EGT82974.1;Name=EGT82974.1;Note=Hypothetical autotransporter beta-domain;Ontology_term=GO:0009279,GO:0016021,GO:0019867;gbkey=CDS;go_component=cell outer membrane|0009279||,integral to membrane|0016021||,outer membrane|0019867||;locus_tag=GGE_0337;product=putative autotransporter betadomain-containing protein;protein_id=EGT82974.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70111 70432 . + . ID=id-GGE_0337;Note=multi-dom%3B label: rne;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70117 71317 . + . ID=id-GGE_0337-2;Dbxref=InterPro:IPR006315,TIGRFAM:TIGR01414;Note=autotrans_barl: outer membrane autotra~outer membrane autotransporter barrel;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70442 71322 . + . ID=id-GGE_0337-3;Note=VFDB hit~VFDB:VFG0337;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70480 70954 . + . ID=id-GGE_0337-4;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70564 70870 . + . ID=id-GGE_0337-5;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70570 70792 . + . ID=id-GGE_0337-6;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70666 70696 . + . ID=id-GGE_0337-7;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature;locus_tag=GGE_0337 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70150 71263 . - . ID=id-AFQR01000007.1:70150..71263;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70174 70594 . - . ID=id-AFQR01000007.1:70174..70594;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 70408 70801 . - . ID=id-AFQR01000007.1:70408..70801;Dbxref=InterPro:IPR011250;Note=Gene3D:2.40.160.20~outer membrane protein%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 71608 72864 . - . ID=gene-GGE_0338;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank CDS 71608 72864 . - 0 ID=cds-EGT82975.1;Parent=gene-GGE_0338;Dbxref=GeneID:1171061,InterPro:IPR002091,InterPro:IPR002293,InterPro:IPR013059,InterPro:IPR013061,InterPro:IPR018227,PFAM:PF03222,TIGRFAM:TIGR00837,NCBI_GP:EGT82975.1;Name=EGT82975.1;Ontology_term=GO:0006865,GO:0015801,GO:0055085,GO:0005887,GO:0016020,GO:0015171,GO:0015173;gbkey=CDS;gene=mtr;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=amino acid transmembrane transporter activity|0015171||,aromatic amino acid transmembrane transporter activity|0015173||;go_process=amino acid transport|0006865||,aromatic amino acid transport|0015801||,transmembrane transport|0055085||;locus_tag=GGE_0338;product=Tryptophan-specific transport protein;protein_id=EGT82975.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71614 72814 . - . ID=id-GGE_0338;Dbxref=InterPro:IPR002293;Note=HMMPanther:PTHR11785:SF133~tryptophan permease~HMMPanther:PTHR11785~family not named~amino acid/polyamine transporter i;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71626 72805 . - . ID=id-GGE_0338-2;Dbxref=InterPro:IPR018227,PFAM:PF03222;Note=trp_tyr_perm~tryptophan/tyrosine permease;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71629 71668 . - . ID=id-GGE_0338-3;Note=transmembrane_regions;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71635 71665 . - . ID=id-GGE_0338-4;Note=seg;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71641 72772 . - . ID=id-GGE_0338-5;Dbxref=InterPro:IPR013059,TIGRFAM:TIGR00837;Note=araap: aromatic amino acid transport protein~tryptophan/tyrosine transporter;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71650 71680 . - . ID=id-GGE_0338-6;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71692 72721 . - . ID=id-GGE_0338-7;Note=superfamily%3B label: Aa_trans superfamily;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71695 72763 . - . ID=id-GGE_0338-8;Note=multi-dom%3B label: SdaC;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 72490 72499 . - . ID=id-GGE_0338-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=mtr;locus_tag=GGE_0338 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71632 72610 . + . ID=id-AFQR01000007.1:71632..72610;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71659 71671 . + . ID=id-AFQR01000007.1:71659..71671;Dbxref=InterPro:IPR013061;Note=PatternScan:PS00594~aromatic_aa_permease_1~tryptophan/tryrosine permease%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71665 72598 . + . ID=id-AFQR01000007.1:71665..72598;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71668 72661 . + . ID=id-AFQR01000007.1:71668..72661;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71668 72496 . + . ID=id-AFQR01000007.1:71668..72496;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71668 72313 . + . ID=id-AFQR01000007.1:71668..72313;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71668 72301 . + . ID=id-AFQR01000007.1:71668..72301;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71668 71731 . + . ID=id-AFQR01000007.1:71668..71731;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71671 72079 . + . ID=id-AFQR01000007.1:71671..72079;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71671 71866 . + . ID=id-AFQR01000007.1:71671..71866;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72781 . + . ID=id-AFQR01000007.1:71677..72781;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72652 . + . ID=id-AFQR01000007.1:71677..72652;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72571 . + . ID=id-AFQR01000007.1:71677..72571;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72469 . + . ID=id-AFQR01000007.1:71677..72469;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72196 . + . ID=id-AFQR01000007.1:71677..72196;Dbxref=InterPro:IPR002091;Note=transmembrane_regions~FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 72070 . + . ID=id-AFQR01000007.1:71677..72070;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 71983 . + . ID=id-AFQR01000007.1:71677..71983;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 71857 . + . ID=id-AFQR01000007.1:71677..71857;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 71677 71716 . + . ID=id-AFQR01000007.1:71677..71716;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 72985 73764 . + . ID=gene-GGE_0339;Name=GGE_0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0339 GCA_000222085.2|AFQR01000007.1 Genbank CDS 72985 73764 . + 0 ID=cds-EGT82976.1;Parent=gene-GGE_0339;Dbxref=GeneID:325579135,InterPro:IPR001915,PFAM:PF01435,NCBI_GP:EGT82976.1;Name=EGT82976.1;Note=ZP_08149091;Ontology_term=GO:0006508,GO:0016020,GO:0004222;gbkey=CDS;go_component=membrane|0016020||;go_function=metalloendopeptidase activity|0004222||;go_process=proteolysis|0006508||;locus_tag=GGE_0339;product=heat shock protein HtpX;protein_id=EGT82976.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 72985 73048 . + . ID=id-GGE_0339;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0339 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 73051 73666 . + . ID=id-GGE_0339-2;Note=superfamily%3B label: Peptidase_M48 superfamily;gbkey=misc_feature;locus_tag=GGE_0339 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 73087 73594 . + . ID=id-GGE_0339-3;Dbxref=InterPro:IPR001915,PFAM:PF01435;Note=peptidase_m48~peptidase m48;gbkey=misc_feature;locus_tag=GGE_0339 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 73222 73513 . + . ID=id-GGE_0339-4;Note=HMMPanther:PTHR22726~family not named;gbkey=misc_feature;locus_tag=GGE_0339 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 73051 73696 . - . ID=id-AFQR01000007.1:73051..73696;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 75036 76352 . - . ID=gene-GGE_0340;Name=GGE_0340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank CDS 75036 76352 . - 0 ID=cds-EGT82977.1;Parent=gene-GGE_0340;Dbxref=GeneID:1175209,InterPro:IPR004736,InterPro:IPR005829,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00883,NCBI_GP:EGT82977.1;Name=EGT82977.1;Note=HI_0281;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0340;product=Putative metabolite transport protein;protein_id=EGT82977.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75036 76350 . - . ID=id-GGE_0340;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75072 76296 . - . ID=id-GGE_0340-2;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75072 75105 . - . ID=id-GGE_0340-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75075 76287 . - . ID=id-GGE_0340-4;Note=HMMPanther:PTHR24063:SF217~shikimate transporter~HMMPanther:PTHR24063~family not named;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75090 76125 . - . ID=id-GGE_0340-5;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75093 76245 . - . ID=id-GGE_0340-6;Dbxref=InterPro:IPR004736,TIGRFAM:TIGR00883;Note=multi-dom~2a0106: mfs transporter%2C metabolite:h+ sympo~citrate-proton symport%3B label: 2A0106;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75120 75585 . - . ID=id-GGE_0340-7;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75222 76128 . - . ID=id-GGE_0340-8;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;locus_tag=GGE_0340 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75072 75405 . + . ID=id-AFQR01000007.1:75072..75405;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75087 75171 . + . ID=id-AFQR01000007.1:75087..75171;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75090 75948 . + . ID=id-AFQR01000007.1:75090..75948;Dbxref=InterPro:IPR005829;Note=PatternScan:PS00216~sugar_transport_1~sugar transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75096 75753 . + . ID=id-AFQR01000007.1:75096..75753;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 76248 . + . ID=id-AFQR01000007.1:75105..76248;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 76161 . + . ID=id-AFQR01000007.1:75105..76161;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 76065 . + . ID=id-AFQR01000007.1:75105..76065;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75984 . + . ID=id-AFQR01000007.1:75105..75984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75873 . + . ID=id-AFQR01000007.1:75105..75873;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75591 . + . ID=id-AFQR01000007.1:75105..75591;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75504 . + . ID=id-AFQR01000007.1:75105..75504;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75291 . + . ID=id-AFQR01000007.1:75105..75291;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75105 75198 . + . ID=id-AFQR01000007.1:75105..75198;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 75588 75750 . + . ID=id-AFQR01000007.1:75588..75750;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 76408 77151 . - . ID=gene-GGE_0341;Name=GGE_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank CDS 76408 77151 . - 0 ID=cds-EGT82978.1;Parent=gene-GGE_0341;Dbxref=InterPro:IPR000073,InterPro:IPR022485,PFAM:PF00561,TIGRFAM:TIGR03695,NCBI_GP:EGT82978.1;Name=EGT82978.1;Note=HI_0282;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;go_function=2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase activity|0070205||;go_process=menaquinone biosynthetic process|0009234||;locus_tag=GGE_0341;product=Putative acyl-CoA thioester hydrolase;protein_id=EGT82978.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76408 77140 . - . ID=id-GGE_0341;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76408 77134 . - . ID=id-GGE_0341-2;Dbxref=InterPro:IPR022485,TIGRFAM:TIGR03695;Note=menh_shchc: 2-succinyl-6-hydroxy-2%2C4-cyclo~2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76417 77119 . - . ID=id-GGE_0341-3;Note=multi-dom%3B label: menH_SHCHC;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76420 77134 . - . ID=id-GGE_0341-4;Note=HMMPanther:PTHR10992~alpha/beta hydrolase fold-containing protein;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76420 77122 . - . ID=id-GGE_0341-5;Note=Gene3D:3.40.50.1820~superfamily:SSF53474~alpha/beta-hydrolases;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76489 77035 . - . ID=id-GGE_0341-6;Dbxref=InterPro:IPR000073,PFAM:PF00561;Note=abhydrolase_1~alpha/beta hydrolase fold-1;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76589 76598 . - . ID=id-GGE_0341-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 76963 76972 . - . ID=id-GGE_0341-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0341 GCA_000222085.2|AFQR01000007.1 Genbank gene 77213 78937 . - . ID=gene-GGE_0342;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank CDS 77213 78937 . - 0 ID=cds-EGT82979.1;Parent=gene-GGE_0342;Dbxref=GeneID:193806074,InterPro:IPR004433,InterPro:IPR011766,InterPro:IPR012001,PFAM:PF02775,PFAM:PF02776,TIGRFAM:TIGR00173,NCBI_GP:EGT82979.1;Name=EGT82979.1;Ontology_term=GO:0009234,GO:0070204,GO:0003824,GO:0030976;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||,catalytic activity|0003824||,thiamine pyrophosphate binding|0030976||;go_process=menaquinone biosynthetic process|0009234||;locus_tag=GGE_0342;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=EGT82979.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77213 78923 . - . ID=id-GGE_0342;Note=HMMPanther:PTHR18968:SF3~menaquinone biosynthesis protein~HMMPanther:PTHR18968~family not named;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77234 78908 . - . ID=id-GGE_0342-2;Note=multi-dom%3B label: PRK07449;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77243 78887 . - . ID=id-GGE_0342-3;Dbxref=InterPro:IPR004433;Note=HAMAP:MF_01659~mend~menaquinone biosynthesis protein mend;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77252 77792 . - . ID=id-GGE_0342-4;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77258 78506 . - . ID=id-GGE_0342-5;Dbxref=InterPro:IPR004433,TIGRFAM:TIGR00173;Note=mend: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-c~menaquinone biosynthesis protein mend;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77258 77750 . - . ID=id-GGE_0342-6;Note=Gene3D:3.40.50.970;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77264 77720 . - . ID=id-GGE_0342-7;Dbxref=InterPro:IPR012001,PFAM:PF02776;Note=tpp_enzyme_n~thiamine pyrophosphate enzyme tpp-binding domain;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77270 77702 . - . ID=id-GGE_0342-8;Note=specific~superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature;gene=menD;locus_tag=GGE_0342 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77258 78506 . + . ID=id-AFQR01000007.1:77258..78506;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77585 78491 . + . ID=id-AFQR01000007.1:77585..78491;Dbxref=InterPro:IPR011766,PFAM:PF02775;Note=tpp_enzyme_c~thiamine pyrophosphate enzyme tpp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77729 78356 . + . ID=id-AFQR01000007.1:77729..78356;Note=specific~superfamily%3B label: TPP_enzyme superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77792 78350 . + . ID=id-AFQR01000007.1:77792..78350;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 77795 78320 . + . ID=id-AFQR01000007.1:77795..78320;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 78934 80205 . - . ID=gene-GGE_0343;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank CDS 78934 80205 . - 0 ID=cds-EGT82980.1;Parent=gene-GGE_0343;Dbxref=GeneID:1170920,InterPro:IPR004561,InterPro:IPR005801,InterPro:IPR015890,PFAM:PF00425,TIGRFAM:TIGR00543,NCBI_GP:EGT82980.1;Name=EGT82980.1;Ontology_term=GO:0009058,GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||;go_process=biosynthetic process|0009058||;locus_tag=GGE_0343;product=Menaquinone-specific isochorismate synthase;protein_id=EGT82980.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 78961 80179 . - . ID=id-GGE_0343;Note=multi-dom%3B label: MenF;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 78970 80161 . - . ID=id-GGE_0343-2;Dbxref=InterPro:IPR005801;Note=superfamily:SSF56322~adc synthase~adc synthase;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 78988 80143 . - . ID=id-GGE_0343-3;Dbxref=InterPro:IPR005801;Note=Gene3D:3.60.120.10~adc synthase;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 79192 79936 . - . ID=id-GGE_0343-4;Dbxref=InterPro:IPR004561,TIGRFAM:TIGR00543;Note=superfamily~isochor_syn: isochorismate synthase~isochorismate synthase%3B label: Chorismate_bind superfamily;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 79408 79729 . - . ID=id-GGE_0343-5;Dbxref=InterPro:IPR004561;Note=HMMPanther:PTHR11236:SF3~isochorismate synthase~isochorismate synthase~HMMPanther:PTHR11236~family not named;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 79411 79693 . - . ID=id-GGE_0343-6;Dbxref=InterPro:IPR015890,PFAM:PF00425;Note=chorismate_bind~chorismate-binding protein;gbkey=misc_feature;gene=menF;locus_tag=GGE_0343 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 79778 79787 . + . ID=id-AFQR01000007.1:79778..79787;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 80022 80408 . + . ID=gene-GGE_0344;Name=GGE_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0344 GCA_000222085.2|AFQR01000007.1 Genbank CDS 80022 80408 . + 0 ID=cds-EGT82981.1;Parent=gene-GGE_0344;Dbxref=GeneID:1074337,NCBI_GP:EGT82981.1;Name=EGT82981.1;Note=E64005;gbkey=CDS;locus_tag=GGE_0344;product=Hypothetical protein;protein_id=EGT82981.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80315 80324 . - . ID=id-AFQR01000007.1:80315..80324;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 80362 81576 . + . ID=gene-GGE_0345;Name=GGE_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank CDS 80362 81576 . + 0 ID=cds-EGT82982.1;Parent=gene-GGE_0345;Dbxref=GeneID:6136699,InterPro:IPR001176,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,NCBI_GP:EGT82982.1;Name=EGT82982.1;Note=HI_0286;Ontology_term=GO:0009058,GO:0016847,GO:0003824,GO:0030170,GO:0016769;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate synthase activity|0016847||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||,transferase activity transferring nitrogenous groups|0016769||;go_process=biosynthetic process|0009058||;locus_tag=GGE_0345;product=putative aminotransferase%2C class I/classII;protein_id=EGT82982.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80362 81571 . + . ID=id-GGE_0345;Dbxref=InterPro:IPR015424;Note=superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80380 81559 . + . ID=id-GGE_0345-2;Note=HMMPanther:PTHR11751:SF30~aminotransferase related~HMMPanther:PTHR11751~family not named;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80464 81457 . + . ID=id-GGE_0345-3;Note=multi-dom%3B label: tyr_amTase_E;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80470 81448 . + . ID=id-GGE_0345-4;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80521 81046 . + . ID=id-GGE_0345-5;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80542 81361 . + . ID=id-GGE_0345-6;Dbxref=InterPro:IPR004839,PFAM:PF00155;Note=aminotran_1_2~aminotransferase%2C class i/classii;gbkey=misc_feature;locus_tag=GGE_0345 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80428 80719 . - . ID=id-AFQR01000007.1:80428..80719;Dbxref=InterPro:IPR001176;Note=FPrintScan:PR00753~accsynthase~1-aminocyclopropane-1-carboxylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80437 81055 . - . ID=id-AFQR01000007.1:80437..81055;Dbxref=InterPro:IPR001176;Note=FPrintScan:PR00753~accsynthase~1-aminocyclopropane-1-carboxylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80437 80860 . - . ID=id-AFQR01000007.1:80437..80860;Dbxref=InterPro:IPR001176;Note=FPrintScan:PR00753~accsynthase~1-aminocyclopropane-1-carboxylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 80731 81205 . - . ID=id-AFQR01000007.1:80731..81205;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 82373 82975 . - . ID=gene-GGE_0346;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank CDS 82373 82975 . - 0 ID=cds-EGT82983.1;Parent=gene-GGE_0346;Dbxref=GeneID:1170776,InterPro:IPR000573,InterPro:IPR004431,InterPro:IPR015928,InterPro:IPR015936,InterPro:IPR015937,PFAM:PF00694,TIGRFAM:TIGR00171,NCBI_GP:EGT82983.1;Name=EGT82983.1;Ontology_term=GO:0008652,GO:0009098,GO:0008152,GO:0009316,GO:0003861,GO:0016836;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||;go_function=3-isopropylmalate dehydratase activity|0003861||,hydro-lyase activity|0016836||;go_process=cellular amino acid biosynthetic process|0008652||,leucine biosynthetic process|0009098||,metabolic process|0008152||;locus_tag=GGE_0346;product=3-isopropylmalate dehydratase small subunit;protein_id=EGT82983.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82373 82973 . - . ID=id-GGE_0346;Dbxref=InterPro:IPR015928;Note=superfamily:SSF52016~leud/ilvd-like~aconitase/3-isopropylmalate dehydratase%2C swivel;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82373 82970 . - . ID=id-GGE_0346-2;Dbxref=InterPro:IPR004431;Note=HAMAP:MF_01031~leud_type1~3-isopropylmalate dehydratase%2C small subunit;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82373 82952 . - . ID=id-GGE_0346-3;Dbxref=InterPro:IPR015928;Note=Gene3D:3.20.19.10~aconitase/3-isopropylmalate dehydratase%2C swivel;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82373 82937 . - . ID=id-GGE_0346-4;Dbxref=InterPro:IPR004431,TIGRFAM:TIGR00171;Note=leud: 3-isopropylmalate dehydratase%2C small s~3-isopropylmalate dehydratase%2C small subunit;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82373 82748 . - . ID=id-GGE_0346-5;Dbxref=InterPro:IPR000573,PFAM:PF00694;Note=aconitase_c~aconitase a/isopropylmalate dehydratase small subunit%2C swivel;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82385 82955 . - . ID=id-GGE_0346-6;Dbxref=InterPro:IPR015936,InterPro:IPR015937;Note=HMMPanther:PTHR11670:SF6~3-isopropylmalate dehydratase~homoaconitase/3-isopropylmalate dehydratase%2C small/large subunit~HMMPanther:PTHR11670~family not named~aconitase/isopropylmalate dehydratase;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82415 82775 . - . ID=id-GGE_0346-7;Note=specific~superfamily%3B label: Aconitase_swivel superfamily;gbkey=misc_feature;gene=leuD;locus_tag=GGE_0346 GCA_000222085.2|AFQR01000007.1 Genbank gene 82986 84395 . - . ID=gene-GGE_0347;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank CDS 82986 84395 . - 0 ID=cds-EGT82984.1;Parent=gene-GGE_0347;Dbxref=GeneID:1170770,InterPro:IPR001030,InterPro:IPR004430,InterPro:IPR015931,InterPro:IPR015932,InterPro:IPR015936,InterPro:IPR015937,InterPro:IPR018136,PFAM:PF00330,TIGRFAM:TIGR00170,NCBI_GP:EGT82984.1;Name=EGT82984.1;Ontology_term=GO:0008652,GO:0009098,GO:0008152,GO:0003861,GO:0051539,GO:0016836;gbkey=CDS;gene=leuC;go_function=3-isopropylmalate dehydratase activity|0003861||,4 iron 4 sulfur cluster binding|0051539||,hydro-lyase activity|0016836||;go_process=cellular amino acid biosynthetic process|0008652||,leucine biosynthetic process|0009098||,metabolic process|0008152||;locus_tag=GGE_0347;product=3-isopropylmalate dehydratase large subunit;protein_id=EGT82984.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82986 84387 . - . ID=id-GGE_0347;Dbxref=InterPro:IPR004430;Note=HAMAP:MF_01026~leuc_type1~3-isopropylmalate dehydratase%2C large subunit;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82986 84384 . - . ID=id-GGE_0347-2;Dbxref=InterPro:IPR001030,InterPro:IPR004430,TIGRFAM:TIGR00170;Note=multi-dom~leuc: 3-isopropylmalate dehydratase%2C large s~3-isopropylmalate dehydratase%2C large subunit~superfamily:SSF53732~aconitase iron-sulfur domain~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha%3B label: PRK00402;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82986 84378 . - . ID=id-GGE_0347-3;Dbxref=InterPro:IPR015936,InterPro:IPR015937;Note=HMMPanther:PTHR11670:SF6~3-isopropylmalate dehydratase~homoaconitase/3-isopropylmalate dehydratase%2C small/large subunit~HMMPanther:PTHR11670~family not named~aconitase/isopropylmalate dehydratase;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82992 83457 . - . ID=id-GGE_0347-4;Dbxref=InterPro:IPR015931;Note=Gene3D:3.30.499.10~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha%2C subdomain 1/3;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 82998 84351 . - . ID=id-GGE_0347-5;Dbxref=InterPro:IPR001030,PFAM:PF00330;Note=aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83073 84282 . - . ID=id-GGE_0347-6;Note=specific~superfamily%3B label: Aconitase superfamily;gbkey=misc_feature;gene=leuC;locus_tag=GGE_0347 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83004 84333 . + . ID=id-AFQR01000007.1:83004..84333;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83013 83310 . + . ID=id-AFQR01000007.1:83013..83310;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83022 84015 . + . ID=id-AFQR01000007.1:83022..84015;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83028 84186 . + . ID=id-AFQR01000007.1:83028..84186;Dbxref=InterPro:IPR001030,InterPro:IPR018136;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha~PatternScan:PS01244~aconitase_2~aconitase family%2C 4fe-4s cluster binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83028 83613 . + . ID=id-AFQR01000007.1:83028..83613;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83028 83571 . + . ID=id-AFQR01000007.1:83028..83571;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83028 83343 . + . ID=id-AFQR01000007.1:83028..83343;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83028 83232 . + . ID=id-AFQR01000007.1:83028..83232;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83031 83844 . + . ID=id-AFQR01000007.1:83031..83844;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83034 83385 . + . ID=id-AFQR01000007.1:83034..83385;Dbxref=InterPro:IPR001030;Note=FPrintScan:PR00415~aconitase~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83037 84003 . + . ID=id-AFQR01000007.1:83037..84003;Dbxref=InterPro:IPR018136;Note=PatternScan:PS00450~aconitase_1~aconitase family%2C 4fe-4s cluster binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83331 83484 . + . ID=id-AFQR01000007.1:83331..83484;Dbxref=InterPro:IPR015932;Note=Gene3D:3.40.1060.10~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 83388 83988 . + . ID=id-AFQR01000007.1:83388..83988;Dbxref=InterPro:IPR015931;Note=Gene3D:3.30.499.10~aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha%2C subdomain 1/3;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84461 84470 . - . ID=id-AFQR01000007.1:84461..84470;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 84484 85428 . - . ID=gene-GGE_0348;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=GGE_0348 GCA_000222085.2|AFQR01000007.1 Genbank CDS 84484 85428 . - 0 ID=cds-EGT82985.1;Parent=gene-GGE_0348;Dbxref=GeneID:81335999,InterPro:IPR001804,InterPro:IPR004429,InterPro:IPR019818,PFAM:PF00180,TIGRFAM:TIGR00169,NCBI_GP:EGT82985.1;Name=EGT82985.1;Ontology_term=GO:0009098,GO:0055114,GO:0005737,GO:0003862,GO:0051287,GO:0000287,GO:0016616;gbkey=CDS;gene=leuB;go_component=cytoplasm|0005737||;go_function=3-isopropylmalate dehydrogenase activity|0003862||,NAD or NADH binding|0051287||,magnesium ion binding|0000287||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||;go_process=leucine biosynthetic process|0009098||,oxidation-reduction process|0055114||;locus_tag=GGE_0348;product=3-isopropylmalate dehydrogenase;protein_id=EGT82985.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84508 85393 . - . ID=id-GGE_0348;Dbxref=InterPro:IPR004429,TIGRFAM:TIGR00169;Note=leub: 3-isopropylmalate dehydrogenase~isopropylmalate dehydrogenase;gbkey=misc_feature;gene=leuB;locus_tag=GGE_0348 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84526 85387 . - . ID=id-GGE_0348-2;Dbxref=InterPro:IPR001804;Note=Gene3D:3.40.718.10~isocitrate/isopropylmalate dehydrogenase~superfamily:SSF53659~isocitrate/isopropylmalate dehydrogenase-like;gbkey=misc_feature;gene=leuB;locus_tag=GGE_0348 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84535 85378 . - . ID=id-GGE_0348-3;Dbxref=InterPro:IPR001804,InterPro:IPR004429;Note=superfamily~HMMPanther:PTHR11835:SF13~3-isopropylmalate dehydrogenase~isopropylmalate dehydrogenase~HMMPanther:PTHR11835~family not named~isocitrate/isopropylmalate dehydrogenase%3B label: Iso_dh superfamily;gbkey=misc_feature;gene=leuB;locus_tag=GGE_0348 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84535 85363 . - . ID=id-GGE_0348-4;Dbxref=InterPro:IPR001804,PFAM:PF00180;Note=iso_dh~isocitrate/isopropylmalate dehydrogenase;gbkey=misc_feature;gene=leuB;locus_tag=GGE_0348 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84523 84862 . + . ID=id-AFQR01000007.1:84523..84862;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 84544 85090 . + . ID=id-AFQR01000007.1:84544..85090;Dbxref=InterPro:IPR019818;Note=PatternScan:PS00470~idh_imdh~isocitrate/isopropylmalate dehydrogenase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 85367 85561 . - . ID=gene-GGE_0349;Name=GGE_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank CDS 85367 85561 . - 0 ID=cds-EGT82986.1;Parent=gene-GGE_0349;Dbxref=InterPro:IPR001804,InterPro:IPR004429,PFAM:PF00180,NCBI_GP:EGT82986.1;Name=EGT82986.1;Note=Hypothetical isocitrate/Isopropylmalate dehydrogenase-like;Ontology_term=GO:0009098,GO:0055114,GO:0005737,GO:0003862,GO:0051287,GO:0000287,GO:0016616;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=3-isopropylmalate dehydrogenase activity|0003862||,NAD or NADH binding|0051287||,magnesium ion binding|0000287||,oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor|0016616||;go_process=leucine biosynthetic process|0009098||,oxidation-reduction process|0055114||;locus_tag=GGE_0349;product=putative isocitrate/Isopropylmalate dehydrogenase-like protein;protein_id=EGT82986.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85367 85556 . - . ID=id-GGE_0349;Dbxref=InterPro:IPR001804,InterPro:IPR004429;Note=HMMPanther:PTHR11835:SF13~3-isopropylmalate dehydrogenase~isopropylmalate dehydrogenase~HMMPanther:PTHR11835~family not named~isocitrate/isopropylmalate dehydrogenase;gbkey=misc_feature;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85373 85553 . - . ID=id-GGE_0349-2;Dbxref=InterPro:IPR001804;Note=Gene3D:3.40.718.10~isocitrate/isopropylmalate dehydrogenase;gbkey=misc_feature;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85373 85544 . - . ID=id-GGE_0349-3;Note=superfamily%3B label: Iso_dh superfamily;gbkey=misc_feature;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85376 85553 . - . ID=id-GGE_0349-4;Note=superfamily:SSF53659~isocitrate/isopropylmalate dehydrogenase-like;gbkey=misc_feature;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85382 85541 . - . ID=id-GGE_0349-5;Dbxref=InterPro:IPR001804,PFAM:PF00180;Note=iso_dh~isocitrate/isopropylmalate dehydrogenase;gbkey=misc_feature;locus_tag=GGE_0349 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85587 85596 . + . ID=id-AFQR01000007.1:85587..85596;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 85741 87288 . - . ID=gene-GGE_0350;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank CDS 85741 87288 . - 0 ID=cds-EGT82987.1;Parent=gene-GGE_0350;Dbxref=GeneID:81336000,InterPro:IPR000891,InterPro:IPR002034,InterPro:IPR005671,InterPro:IPR013709,InterPro:IPR013785,PFAM:PF00682,PFAM:PF08502,TIGRFAM:TIGR00973,NCBI_GP:EGT82987.1;Name=EGT82987.1;Ontology_term=GO:0019752,GO:0009098,GO:0008152,GO:0003852,GO:0003824,GO:0046912;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||,catalytic activity|0003824||,transferase activity transferring acyl groups acyl groups converted into alkyl on transfer|0046912||;go_process=carboxylic acid metabolic process|0019752||,leucine biosynthetic process|0009098||,metabolic process|0008152||;locus_tag=GGE_0350;product=2-isopropylmalate synthase;protein_id=EGT82987.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85741 87280 . - . ID=id-GGE_0350;Note=multi-dom%3B label: PRK00915;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85741 87250 . - . ID=id-GGE_0350-2;Note=HMMPanther:PTHR10277:SF9~2-isopropylmalate synthase~HMMPanther:PTHR10277~homocitrate synthase-related;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85741 86614 . - . ID=id-GGE_0350-3;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85747 86566 . - . ID=id-GGE_0350-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85753 87226 . - . ID=id-GGE_0350-5;Dbxref=InterPro:IPR005671,TIGRFAM:TIGR00973;Note=leua_bact: 2-isopropylmalate synthase~2-isopropylmalate synthase%2C bacterial type;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85756 86530 . - . ID=id-GGE_0350-6;Dbxref=InterPro:IPR000891;Note=ProfileScan:PS50991~pyr_ct~pyruvate carboxyltransferase;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85762 86548 . - . ID=id-GGE_0350-7;Note=specific~superfamily%3B label: DRE_TIM_IPMS;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85777 85792 . - . ID=id-GGE_0350-8;Dbxref=InterPro:IPR002034;Note=PatternScan:PS00815~aipm_homocit_synth_1~alpha-isopropylmalate/homocitrate synthase%2C conserved site;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85780 86458 . - . ID=id-GGE_0350-9;Dbxref=InterPro:IPR000891,PFAM:PF00682;Note=hmgl-like~pyruvate carboxyltransferase;gbkey=misc_feature;gene=leuA;locus_tag=GGE_0350 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 85783 86338 . + . ID=id-AFQR01000007.1:85783..86338;Dbxref=InterPro:IPR002034;Note=PatternScan:PS00816~aipm_homocit_synth_2~alpha-isopropylmalate/homocitrate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 86080 86908 . + . ID=id-AFQR01000007.1:86080..86908;Note=superfamily%3B label: LeuA_dimer superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 86089 86899 . + . ID=id-AFQR01000007.1:86089..86899;Dbxref=InterPro:IPR013709;Note=superfamily:SSF110921~2-isopropylmalate synthase leua%2C allosteric (dimerization) domain~2-isopropylmalate synthase leua%2C allosteric (dimerization) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 86137 86848 . + . ID=id-AFQR01000007.1:86137..86848;Dbxref=InterPro:IPR013709,PFAM:PF08502;Note=leua_dimer~2-isopropylmalate synthase leua%2C allosteric (dimerization) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 87711 88952 . + . ID=gene-GGE_0351;Name=smf;gbkey=Gene;gene=smf;gene_biotype=protein_coding;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank CDS 87711 88952 . + 0 ID=cds-EGT82988.1;Parent=gene-GGE_0351;Dbxref=GeneID:1169419,InterPro:IPR003488,PFAM:PF02481,TIGRFAM:TIGR00732,NCBI_GP:EGT82988.1;Name=EGT82988.1;Ontology_term=GO:0009294;gbkey=CDS;gene=smf;go_process=DNA mediated transformation|0009294||;locus_tag=GGE_0351;product=Protein smf;protein_id=EGT82988.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 87834 88830 . + . ID=id-GGE_0351;Note=multi-dom%3B label: Smf;gbkey=misc_feature;gene=smf;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 88032 88371 . + . ID=id-GGE_0351-2;Dbxref=InterPro:IPR003488,TIGRFAM:TIGR00732;Note=superfamily~dpra: dna protecting protein dpra~dna recombination-mediator protein a%3B label: DNA_processg_A superfamily;gbkey=misc_feature;gene=smf;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 88041 88335 . + . ID=id-GGE_0351-3;Dbxref=InterPro:IPR003488,PFAM:PF02481;Note=dna_processg_a~dna recombination-mediator protein a;gbkey=misc_feature;gene=smf;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 88065 88344 . + . ID=id-GGE_0351-4;Note=superfamily:SSF102405~moco carrier like protein;gbkey=misc_feature;gene=smf;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 88164 88206 . + . ID=id-GGE_0351-5;Note=Gene3D:3.40.50.450;gbkey=misc_feature;gene=smf;locus_tag=GGE_0351 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 87765 88866 . - . ID=id-AFQR01000007.1:87765..88866;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 88145 88154 . - . ID=id-AFQR01000007.1:88145..88154;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 88930 89781 . + . ID=gene-GGE_0352;Name=GGE_0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0352 GCA_000222085.2|AFQR01000007.1 Genbank CDS 88930 89781 . + 0 ID=cds-EGT82989.1;Parent=gene-GGE_0352;Dbxref=GeneID:32130457,InterPro:IPR005583,PFAM:PF03883,NCBI_GP:EGT82989.1;Name=EGT82989.1;Note=HI_0984;gbkey=CDS;locus_tag=GGE_0352;product=UPF0246 protein;protein_id=EGT82989.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89008 89695 . + . ID=id-GGE_0352;Dbxref=InterPro:IPR005583;Note=superfamily~HAMAP:MF_00652~upf0246~uncharacterised protein family upf0246%3B label: DUF328 superfamily;gbkey=misc_feature;locus_tag=GGE_0352 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89008 89662 . + . ID=id-GGE_0352-2;Dbxref=InterPro:IPR005583,PFAM:PF03883;Note=duf328~uncharacterised protein family upf0246;gbkey=misc_feature;locus_tag=GGE_0352 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89044 89053 . + . ID=id-GGE_0352-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0352 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89075 89084 . - . ID=id-AFQR01000007.1:89075..89084;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 89774 90355 . + . ID=gene-GGE_0353;Name=GGE_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0353 GCA_000222085.2|AFQR01000007.1 Genbank CDS 89774 90355 . + 0 ID=cds-EGT82990.1;Parent=gene-GGE_0353;Dbxref=GeneID:1175347,NCBI_GP:EGT82990.1;Name=EGT82990.1;Note=HI_0983;gbkey=CDS;locus_tag=GGE_0353;product=Hypothetical protein;protein_id=EGT82990.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89774 89822 . + . ID=id-GGE_0353;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0353 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 89783 90344 . + . ID=id-GGE_0353-2;Note=BlastProDom:PD487572~y983_haein_p43907;gbkey=misc_feature;locus_tag=GGE_0353 GCA_000222085.2|AFQR01000007.1 Genbank gene 90463 91428 . + . ID=gene-GGE_0354;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank CDS 90463 91428 . + 0 ID=cds-EGT82991.1;Parent=gene-GGE_0354;Dbxref=GeneID:81336004,InterPro:IPR000023,InterPro:IPR012003,InterPro:IPR012828,InterPro:IPR015912,InterPro:IPR022953,PFAM:PF00365,PIR:PIRSF000532,TIGRFAM:TIGR02482,NCBI_GP:EGT82991.1;Name=EGT82991.1;Ontology_term=GO:0006002,GO:0006096,GO:0005945,GO:0003872,GO:0005524,GO:0008443;gbkey=CDS;gene=pfkA;go_component=6-phosphofructokinase complex|0005945||;go_function=6-phosphofructokinase activity|0003872||,ATP binding|0005524||,phosphofructokinase activity|0008443||;go_process=fructose 6-phosphate metabolic process|0006002||,glycolysis|0006096||;locus_tag=GGE_0354;product=6-phosphofructokinase;protein_id=EGT82991.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90463 91426 . + . ID=id-GGE_0354;Dbxref=InterPro:IPR012003,PIR:PIRSF000532;Note=atp-dependent phosphofructokinase%2C prokaryotic type~atp-dependent phosphofructokinase%2C prokaryotic;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90469 91420 . + . ID=id-GGE_0354-2;Note=multi-dom%3B label: PRK03202;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90469 91393 . + . ID=id-GGE_0354-3;Dbxref=InterPro:IPR000023;Note=superfamily:SSF53784~phosphofructokinase~phosphofructokinase domain;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90472 91420 . + . ID=id-GGE_0354-4;Dbxref=InterPro:IPR022953;Note=specific~superfamily~HAMAP:MF_00339~phosphofructokinase~phosphofructokinase%3B label: Bacterial_PFK;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90472 91363 . + . ID=id-GGE_0354-5;Note=HMMPanther:PTHR13697~family not named;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90472 91294 . + . ID=id-GGE_0354-6;Dbxref=InterPro:IPR000023,PFAM:PF00365;Note=pfk~phosphofructokinase domain;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90472 91102 . + . ID=id-GGE_0354-7;Note=Gene3D:3.40.50.450;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90475 91360 . + . ID=id-GGE_0354-8;Dbxref=InterPro:IPR012828,TIGRFAM:TIGR02482;Note=pfka_atp: 6-phosphofructokinase~6-phosphofructokinase;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90484 90523 . + . ID=id-GGE_0354-9;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature;gene=pfkA;locus_tag=GGE_0354 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90502 91105 . - . ID=id-AFQR01000007.1:90502..91105;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90505 90559 . - . ID=id-AFQR01000007.1:90505..90559;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90514 90943 . - . ID=id-AFQR01000007.1:90514..90943;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90514 90745 . - . ID=id-AFQR01000007.1:90514..90745;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90517 90997 . - . ID=id-AFQR01000007.1:90517..90997;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90517 90829 . - . ID=id-AFQR01000007.1:90517..90829;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90520 91198 . - . ID=id-AFQR01000007.1:90520..91198;Dbxref=InterPro:IPR015912;Note=PatternScan:PS00433~phosphofructokinase~phosphofructokinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90520 90883 . - . ID=id-AFQR01000007.1:90520..90883;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 90532 91186 . - . ID=id-AFQR01000007.1:90532..91186;Dbxref=InterPro:IPR022953;Note=FPrintScan:PR00476~phfrctkinase~phosphofructokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91520 91529 . + . ID=id-AFQR01000007.1:91520..91529;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 91674 92156 . + . ID=gene-GGE_0355;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank CDS 91674 92156 . + 0 ID=cds-EGT82992.1;Parent=gene-GGE_0355;Dbxref=GeneID:1173461,InterPro:IPR000037,InterPro:IPR020081,PFAM:PF01668,TIGRFAM:TIGR00086,NCBI_GP:EGT82992.1;Name=EGT82992.1;Ontology_term=GO:0006412,GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||;go_process=translation|0006412||;locus_tag=GGE_0355;product=SsrA-binding protein;protein_id=EGT82992.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91674 92154 . + . ID=id-GGE_0355;Dbxref=InterPro:IPR000037;Note=HAMAP:MF_00023~smpb~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91689 92073 . + . ID=id-GGE_0355-2;Dbxref=InterPro:IPR000037;Note=superfamily:SSF74982~small protein b (smpb)~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91707 91875 . + . ID=id-GGE_0355-3;Dbxref=InterPro:IPR000037,PFAM:PF01668;Note=smpb~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91710 92106 . + . ID=id-GGE_0355-4;Dbxref=InterPro:IPR000037,TIGRFAM:TIGR00086;Note=smpb: ssra-binding protein~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91710 92037 . + . ID=id-GGE_0355-5;Dbxref=InterPro:IPR000037;Note=Gene3D:2.40.280.10~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91713 92049 . + . ID=id-GGE_0355-6;Dbxref=InterPro:IPR000037;Note=BlastProDom:PD004488~q4qls9_haei8_q4qls9~ssra-binding protein;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91722 92025 . + . ID=id-GGE_0355-7;Note=specific~superfamily%3B label: SmpB;gbkey=misc_feature;gene=smpB;locus_tag=GGE_0355 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 91713 91767 . - . ID=id-AFQR01000007.1:91713..91767;Dbxref=InterPro:IPR020081;Note=PatternScan:PS01317~ssrp~ssra-binding protein%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 92208 92996 . - . ID=gene-GGE_0356;Name=GGE_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank CDS 92208 92996 . - 0 ID=cds-EGT82993.1;Parent=gene-GGE_0356;Dbxref=GeneID:1175182,InterPro:IPR011990,InterPro:IPR017689,TIGRFAM:TIGR03302,NCBI_GP:EGT82993.1;Name=EGT82993.1;Note=HI_0177;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||;locus_tag=GGE_0356;product=Putative UPF0169 lipoprotein;protein_id=EGT82993.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92208 92265 . - . ID=id-GGE_0356;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92217 92940 . - . ID=id-GGE_0356-2;Dbxref=InterPro:IPR017689,TIGRFAM:TIGR03302;Note=om_yfio: outer membrane assembly lipoprotein~outer membrane assembly lipoprotein yfio;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92229 92241 . - . ID=id-GGE_0356-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92262 92877 . - . ID=id-GGE_0356-4;Note=multi-dom%3B label: OM_YfiO;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92283 92664 . - . ID=id-GGE_0356-5;Note=superfamily:SSF48452~tpr-like;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 92298 92619 . - . ID=id-GGE_0356-6;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature;locus_tag=GGE_0356 GCA_000222085.2|AFQR01000007.1 Genbank gene 93105 94079 . + . ID=gene-GGE_0357;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank CDS 93105 94079 . + 0 ID=cds-EGT82994.1;Parent=gene-GGE_0357;Dbxref=GeneID:1175998,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,InterPro:IPR020103,PFAM:PF00849,PFAM:PF01479,TIGRFAM:TIGR00005,NCBI_GP:EGT82994.1;Name=EGT82994.1;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_0357;product=Ribosomal large subunit pseudouridine synthase D;protein_id=EGT82994.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93105 94077 . + . ID=id-GGE_0357;Note=multi-dom%3B label: rluD;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93123 94056 . + . ID=id-GGE_0357-2;Note=HMMPanther:PTHR10436:SF39~pseudouridine synthase~HMMPanther:PTHR10436~rna pseudouridylate synthase family protein;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93141 94008 . + . ID=id-GGE_0357-3;Dbxref=InterPro:IPR006225,TIGRFAM:TIGR00005;Note=rlua_subfam: pseudouridine synthase%2C rlua~pseudouridine synthase%2C rluc/rlud;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93153 93282 . + . ID=id-GGE_0357-4;Note=superfamily:SSF55174~alpha-l rna-binding motif;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93156 93345 . + . ID=id-GGE_0357-5;Note=specific~superfamily%3B label: S4;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93156 93327 . + . ID=id-GGE_0357-6;Dbxref=InterPro:IPR002942;Note=ProfileScan:PS50889~s4~rna-binding s4;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93156 93249 . + . ID=id-GGE_0357-7;Dbxref=InterPro:IPR002942,PFAM:PF01479;Note=s4~rna-binding s4;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93327 93852 . + . ID=id-GGE_0357-8;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93378 93558 . + . ID=id-GGE_0357-9;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93381 93687 . + . ID=id-GGE_0357-10;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;gene=rluD;locus_tag=GGE_0357 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93144 93750 . - . ID=id-AFQR01000007.1:93144..93750;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 93150 93507 . - . ID=id-AFQR01000007.1:93150..93507;Dbxref=InterPro:IPR006224;Note=PatternScan:PS01129~psi_rlu~pseudouridine synthase%2C rluc/rlud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 94081 94815 . + . ID=gene-GGE_0358;Name=GGE_0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank CDS 94081 94815 . + 0 ID=cds-EGT82995.1;Parent=gene-GGE_0358;Dbxref=GeneID:1175995,InterPro:IPR003730,InterPro:IPR011324,PFAM:PF02578,TIGRFAM:TIGR00726,NCBI_GP:EGT82995.1;Name=EGT82995.1;Note=HI_0175;gbkey=CDS;locus_tag=GGE_0358;product=UPF0124 protein;protein_id=EGT82995.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94081 94813 . + . ID=id-GGE_0358;Dbxref=InterPro:IPR011324;Note=multi-dom~superfamily:SSF64438~cnf1/yfih-like putative cysteine hydrolase~cytotoxic necrotizing factor-like%2C catalytic%3B label: yfiH;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94087 94807 . + . ID=id-GGE_0358-2;Dbxref=InterPro:IPR003730;Note=Gene3D:3.60.140.10~multi-copper polyphenol oxidoreductase%2C laccase;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94093 94798 . + . ID=id-GGE_0358-3;Note=superfamily%3B label: Cu-oxidase_4 superfamily;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94138 94753 . + . ID=id-GGE_0358-4;Dbxref=InterPro:IPR003730,PFAM:PF02578;Note=cu-oxidase_4~multi-copper polyphenol oxidoreductase%2C laccase;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94153 94744 . + . ID=id-GGE_0358-5;Dbxref=InterPro:IPR003730,TIGRFAM:TIGR00726;Note=tigr00726: hypothetical protein%2C yfih fa~multi-copper polyphenol oxidoreductase%2C laccase;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94207 94216 . + . ID=id-GGE_0358-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0358 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94225 94234 . - . ID=id-AFQR01000007.1:94225..94234;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 94857 96113 . - . ID=gene-GGE_0359;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank CDS 94857 96113 . - 0 ID=cds-EGT82996.1;Parent=gene-GGE_0359;Dbxref=GeneID:205822421,InterPro:IPR004506,InterPro:IPR014729,InterPro:IPR023382,PFAM:PF03054,TIGRFAM:TIGR00420,NCBI_GP:EGT82996.1;Name=EGT82996.1;Ontology_term=GO:0008033,GO:0005737,GO:0016740;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||;go_function=transferase activity|0016740||;go_process=tRNA processing|0008033||;locus_tag=GGE_0359;product=tRNA-specific 2-thiouridylase mnmA;protein_id=EGT82996.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95025 95586 . - . ID=id-GGE_0359;Note=superfamily:SSF52402~adenine nucleotide alpha hydrolase-like;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95028 95484 . - . ID=id-GGE_0359-2;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95037 95925 . - . ID=id-GGE_0359-3;Dbxref=InterPro:IPR004506;Note=HAMAP:MF_00144~trna_thiouridyl_mnma~trna-specific 2-thiouridylase;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95037 95922 . - . ID=id-GGE_0359-4;Dbxref=InterPro:IPR004506,PFAM:PF03054,TIGRFAM:TIGR00420;Note=multi-dom~trna_me_trans~trna-specific 2-thiouridylase~trmu: trna (5-methylaminomethyl-2-thiouridyl~trna-specific 2-thiouridylase%3B label: trmU;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95040 95925 . - . ID=id-GGE_0359-5;Dbxref=InterPro:IPR004506;Note=HMMPanther:PTHR11933~family not named~trna-specific 2-thiouridylase;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95040 95919 . - . ID=id-GGE_0359-6;Note=specific~superfamily%3B label: AANH_like superfamily;gbkey=misc_feature;gene=mnmA;locus_tag=GGE_0359 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 94920 95148 . + . ID=id-AFQR01000007.1:94920..95148;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95061 95658 . + . ID=id-AFQR01000007.1:95061..95658;Dbxref=InterPro:IPR023382;Note=Gene3D:2.30.30.280~adenine nucleotide alpha hydrolase-like domains;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 95100 95865 . + . ID=id-AFQR01000007.1:95100..95865;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96100 96109 . + . ID=id-AFQR01000007.1:96100..96109;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 96125 96385 . - . ID=gene-GGE_0360;Name=GGE_0360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0360 GCA_000222085.2|AFQR01000007.1 Genbank CDS 96125 96385 . - 0 ID=cds-EGT82997.1;Parent=gene-GGE_0360;Dbxref=GeneID:1175181,InterPro:IPR007495,PFAM:PF04400,NCBI_GP:EGT82997.1;Name=EGT82997.1;Note=HI_0173;gbkey=CDS;locus_tag=GGE_0360;product=hypothetical protein;protein_id=EGT82997.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96125 96350 . - . ID=id-GGE_0360;Note=superfamily%3B label: DUF539 superfamily;gbkey=misc_feature;locus_tag=GGE_0360 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96140 96185 . - . ID=id-GGE_0360-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0360 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96191 96257 . - . ID=id-GGE_0360-3;Dbxref=InterPro:IPR007495,PFAM:PF04400;Note=duf539~protein of unknown function duf539;gbkey=misc_feature;locus_tag=GGE_0360 GCA_000222085.2|AFQR01000007.1 Genbank gene 96388 97428 . - . ID=gene-GGE_0361;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=GGE_0361 GCA_000222085.2|AFQR01000007.1 Genbank CDS 96388 97428 . - 0 ID=cds-EGT82998.1;Parent=gene-GGE_0361;Dbxref=GeneID:1176633,InterPro:IPR003374,PFAM:PF02424,NCBI_GP:EGT82998.1;Name=EGT82998.1;Ontology_term=GO:0009228;gbkey=CDS;gene=apbE;go_process=thiamine biosynthetic process|0009228||;locus_tag=GGE_0361;product=Thiamine biosynthesis lipoprotein ApbE;protein_id=EGT82998.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96388 96448 . - . ID=id-GGE_0361;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=apbE;locus_tag=GGE_0361 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96394 97414 . - . ID=id-GGE_0361-2;Note=superfamily%3B label: ApbE superfamily;gbkey=misc_feature;gene=apbE;locus_tag=GGE_0361 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96463 97348 . - . ID=id-GGE_0361-3;Note=superfamily:SSF143631~apbe-like;gbkey=misc_feature;gene=apbE;locus_tag=GGE_0361 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96577 97171 . - . ID=id-GGE_0361-4;Dbxref=InterPro:IPR003374,PFAM:PF02424;Note=apbe~thiamine synthesis apbe/upf0280;gbkey=misc_feature;gene=apbE;locus_tag=GGE_0361 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 96454 96556 . + . ID=id-AFQR01000007.1:96454..96556;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97531 97540 . + . ID=id-AFQR01000007.1:97531..97540;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 97572 98807 . - . ID=gene-GGE_0362;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank CDS 97572 98807 . - 0 ID=cds-EGT82999.1;Parent=gene-GGE_0362;Dbxref=GeneID:189030470,InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR008333,InterPro:IPR010205,InterPro:IPR012675,InterPro:IPR017927,InterPro:IPR017938,PFAM:PF00111,PFAM:PF00175,PFAM:PF00970,TIGRFAM:TIGR01941,NCBI_GP:EGT82999.1;Name=EGT82999.1;Ontology_term=GO:0055114,GO:0006814,GO:0009276,GO:0016021,GO:0051537,GO:0009055,GO:0051536,GO:0016655,GO:0016491;gbkey=CDS;gene=nqrF;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=2 iron 2 sulfur cluster binding|0051537||,electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,sodium ion transport|0006814||;locus_tag=GGE_0362;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=EGT82999.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97587 98793 . - . ID=id-GGE_0362;Dbxref=InterPro:IPR010205;Note=HAMAP:MF_00430~nqrf~nadh-quinone reductase%2C na(+)-translocating%2C f subunit;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97587 97641 . - . ID=id-GGE_0362-2;Note=transmembrane_regions;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97593 98787 . - . ID=id-GGE_0362-3;Dbxref=InterPro:IPR010205,TIGRFAM:TIGR01941;Note=nqrf: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh-quinone reductase%2C na(+)-translocating%2C f subunit;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97605 97626 . - . ID=id-GGE_0362-4;Note=seg;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97659 98721 . - . ID=id-GGE_0362-5;Note=multi-dom%3B label: PRK05464;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97680 97857 . - . ID=id-GGE_0362-6;Dbxref=InterPro:IPR001041;Note=ProfileScan:PS51085~2fe2s_fer_2~ferredoxin;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97680 97854 . - . ID=id-GGE_0362-7;Dbxref=InterPro:IPR001041;Note=superfamily:SSF54292~2fe-2s ferredoxin-like~ferredoxin;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97686 97845 . - . ID=id-GGE_0362-8;Dbxref=InterPro:IPR012675;Note=Gene3D:3.10.20.30~beta-grasp fold%2C ferredoxin-type;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97707 97794 . - . ID=id-GGE_0362-9;Dbxref=InterPro:IPR001041,PFAM:PF00111;Note=fer2~ferredoxin;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97899 98076 . - . ID=id-GGE_0362-10;Dbxref=InterPro:IPR017938;Note=superfamily:SSF63380~riboflavin synthase domain-like~riboflavin synthase-like beta-barrel;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97953 98421 . - . ID=id-GGE_0362-11;Note=specific~superfamily%3B label: FNR_like superfamily;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97959 97992 . - . ID=id-GGE_0362-12;Note=Gene3D:2.40.30.10;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97971 97995 . - . ID=id-GGE_0362-13;Dbxref=InterPro:IPR017927;Note=ProfileScan:PS51384~fad_fr~ferredoxin reductase-type fad-binding domain;gbkey=misc_feature;gene=nqrF;locus_tag=GGE_0362 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97596 98211 . + . ID=id-AFQR01000007.1:97596..98211;Dbxref=InterPro:IPR001709;Note=FPrintScan:PR00371~fpncr~flavoprotein pyridine nucleotide cytochrome reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97599 98703 . + . ID=id-AFQR01000007.1:97599..98703;Dbxref=InterPro:IPR001709;Note=FPrintScan:PR00371~fpncr~flavoprotein pyridine nucleotide cytochrome reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97602 98490 . + . ID=id-AFQR01000007.1:97602..98490;Dbxref=InterPro:IPR001709;Note=FPrintScan:PR00371~fpncr~flavoprotein pyridine nucleotide cytochrome reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97602 98280 . + . ID=id-AFQR01000007.1:97602..98280;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97602 97734 . + . ID=id-AFQR01000007.1:97602..97734;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97608 98526 . + . ID=id-AFQR01000007.1:97608..98526;Dbxref=InterPro:IPR001709;Note=FPrintScan:PR00371~fpncr~flavoprotein pyridine nucleotide cytochrome reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97611 97782 . + . ID=id-AFQR01000007.1:97611..97782;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97632 98412 . + . ID=id-AFQR01000007.1:97632..98412;Dbxref=InterPro:IPR001709;Note=FPrintScan:PR00371~fpncr~flavoprotein pyridine nucleotide cytochrome reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97761 98196 . + . ID=id-AFQR01000007.1:97761..98196;Dbxref=InterPro:IPR008333,PFAM:PF00970;Note=fad_binding_6~oxidoreductase%2C fad-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97905 98415 . + . ID=id-AFQR01000007.1:97905..98415;Dbxref=InterPro:IPR001433,PFAM:PF00175;Note=nad_binding_1~oxidoreductase fad/nad(p)-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 97923 98412 . + . ID=id-AFQR01000007.1:97923..98412;Note=Gene3D:3.40.50.80;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98016 98352 . + . ID=id-AFQR01000007.1:98016..98352;Note=superfamily:SSF52343~ferredoxin reductase-like nadp-linked domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98181 98196 . + . ID=id-AFQR01000007.1:98181..98196;Note=HMMPanther:PTHR19370:SF36~subfamily not named~HMMPanther:PTHR19370~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 98820 99416 . - . ID=gene-GGE_0363;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=GGE_0363 GCA_000222085.2|AFQR01000007.1 Genbank CDS 98820 99416 . - 0 ID=cds-EGT83000.1;Parent=gene-GGE_0363;Dbxref=GeneID:167016332,InterPro:IPR003667,InterPro:IPR010967,PFAM:PF02508,PIR:PIRSF006102,TIGRFAM:TIGR01940,NCBI_GP:EGT83000.1;Name=EGT83000.1;Ontology_term=GO:0055114,GO:0022904,GO:0009276,GO:0016021,GO:0016020,GO:0016655;gbkey=CDS;gene=nqrE;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_function=oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||;go_process=oxidation-reduction process|0055114||,respiratory electron transport chain|0022904||;locus_tag=GGE_0363;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=EGT83000.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98820 99414 . - . ID=id-GGE_0363;Dbxref=InterPro:IPR003667,InterPro:IPR010967,PIR:PIRSF006102;Note=superfamily~na(+)-translocating nadh-quinone reductase%2C subunits d/e~electron transport complex%2C rnf/nqr~HAMAP:MF_00429~nqre~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C e subunit%3B label: Rnf-Nqr superfamily;gbkey=misc_feature;gene=nqrE;locus_tag=GGE_0363 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98820 99411 . - . ID=id-GGE_0363-2;Dbxref=InterPro:IPR003667,PFAM:PF02508;Note=rnf-nqr~electron transport complex%2C rnf/nqr;gbkey=misc_feature;gene=nqrE;locus_tag=GGE_0363 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98826 99408 . - . ID=id-GGE_0363-3;Dbxref=InterPro:IPR010967,TIGRFAM:TIGR01940;Note=nqre: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C e subunit;gbkey=misc_feature;gene=nqrE;locus_tag=GGE_0363 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98856 98880 . - . ID=id-GGE_0363-4;Note=transmembrane_regions;gbkey=misc_feature;gene=nqrE;locus_tag=GGE_0363 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98883 99348 . + . ID=id-AFQR01000007.1:98883..99348;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98889 99237 . + . ID=id-AFQR01000007.1:98889..99237;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98889 99144 . + . ID=id-AFQR01000007.1:98889..99144;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98889 99048 . + . ID=id-AFQR01000007.1:98889..99048;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 98889 98943 . + . ID=id-AFQR01000007.1:98889..98943;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 99420 100046 . - . ID=gene-GGE_0364;Name=nqrD;gbkey=Gene;gene=nqrD;gene_biotype=protein_coding;locus_tag=GGE_0364 GCA_000222085.2|AFQR01000007.1 Genbank CDS 99420 100046 . - 0 ID=cds-EGT83001.1;Parent=gene-GGE_0364;Dbxref=GeneID:2506741,InterPro:IPR003667,InterPro:IPR011292,PFAM:PF02508,PIR:PIRSF006102,TIGRFAM:TIGR01939,NCBI_GP:EGT83001.1;Name=EGT83001.1;Ontology_term=GO:0055114,GO:0016020,GO:0016655;gbkey=CDS;gene=nqrD;go_component=membrane|0016020||;go_function=oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0364;product=Na+-translocating NADH-quinone reductase subunit D;protein_id=EGT83001.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99420 100044 . - . ID=id-GGE_0364;Dbxref=InterPro:IPR003667,InterPro:IPR011292,PIR:PIRSF006102;Note=superfamily~na(+)-translocating nadh-quinone reductase%2C subunits d/e~electron transport complex%2C rnf/nqr~HAMAP:MF_00428~nqrd~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C d subunit%3B label: Rnf-Nqr superfamily;gbkey=misc_feature;gene=nqrD;locus_tag=GGE_0364 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99426 100038 . - . ID=id-GGE_0364-2;Dbxref=InterPro:IPR011292,TIGRFAM:TIGR01939;Note=nqrd: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C d subunit;gbkey=misc_feature;gene=nqrD;locus_tag=GGE_0364 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99438 99993 . - . ID=id-GGE_0364-3;Dbxref=InterPro:IPR003667,PFAM:PF02508;Note=rnf-nqr~electron transport complex%2C rnf/nqr;gbkey=misc_feature;gene=nqrD;locus_tag=GGE_0364 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99474 99627 . + . ID=id-AFQR01000007.1:99474..99627;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99483 99723 . + . ID=id-AFQR01000007.1:99483..99723;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99489 99948 . + . ID=id-AFQR01000007.1:99489..99948;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99489 99822 . + . ID=id-AFQR01000007.1:99489..99822;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 99489 99540 . + . ID=id-AFQR01000007.1:99489..99540;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 100046 100780 . - . ID=gene-GGE_0365;Name=nqrC;gbkey=Gene;gene=nqrC;gene_biotype=protein_coding;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank CDS 100046 100780 . - 0 ID=cds-EGT83002.1;Parent=gene-GGE_0365;Dbxref=GeneID:1175178,InterPro:IPR007329,InterPro:IPR010204,PFAM:PF04205,TIGRFAM:TIGR01938,NCBI_GP:EGT83002.1;Name=EGT83002.1;Ontology_term=GO:0055114,GO:0006814,GO:0009276,GO:0016021,GO:0016020,GO:0010181,GO:0016655;gbkey=CDS;gene=nqrC;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_function=FMN binding|0010181||,oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||;go_process=oxidation-reduction process|0055114||,sodium ion transport|0006814||;locus_tag=GGE_0365;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=EGT83002.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100046 100778 . - . ID=id-GGE_0365;Dbxref=InterPro:IPR010204;Note=multi-dom~HAMAP:MF_00427~nqrc~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C c subunit%3B label: NqrC;gbkey=misc_feature;gene=nqrC;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100055 100769 . - . ID=id-GGE_0365-2;Note=superfamily%3B label: FMN_bind superfamily;gbkey=misc_feature;gene=nqrC;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100064 100745 . - . ID=id-GGE_0365-3;Dbxref=InterPro:IPR010204,TIGRFAM:TIGR01938;Note=nqrc: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C c subunit;gbkey=misc_feature;gene=nqrC;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100070 100106 . - . ID=id-GGE_0365-4;Note=seg;gbkey=misc_feature;gene=nqrC;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100082 100115 . - . ID=id-GGE_0365-5;Note=transmembrane_regions;gbkey=misc_feature;gene=nqrC;locus_tag=GGE_0365 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100310 100445 . + . ID=id-AFQR01000007.1:100310..100445;Dbxref=InterPro:IPR007329,PFAM:PF04205;Note=fmn_bind~fmn-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 100773 102008 . - . ID=gene-GGE_0366;Name=nqrB;gbkey=Gene;gene=nqrB;gene_biotype=protein_coding;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank CDS 100773 102008 . - 0 ID=cds-EGT83003.1;Parent=gene-GGE_0366;Dbxref=GeneID:15214088,InterPro:IPR004338,InterPro:IPR010966,PFAM:PF03116,PIR:PIRSF016055,TIGRFAM:TIGR01937,NCBI_GP:EGT83003.1;Name=EGT83003.1;Ontology_term=GO:0055114,GO:0022904,GO:0006810,GO:0009276,GO:0016021,GO:0016020,GO:0010181,GO:0016655;gbkey=CDS;gene=nqrB;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||,membrane|0016020||;go_function=FMN binding|0010181||,oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||;go_process=oxidation-reduction process|0055114||,respiratory electron transport chain|0022904||,transport|0006810||;locus_tag=GGE_0366;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=EGT83003.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100773 102006 . - . ID=id-GGE_0366;Dbxref=InterPro:IPR010966,PIR:PIRSF016055;Note=na(+)-transporting nadh:ubiquinone oxidoreductase%2C nqrb subunit~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C b subunit;gbkey=misc_feature;gene=nqrB;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100773 101997 . - . ID=id-GGE_0366-2;Note=superfamily%3B label: NQR2_RnfD_RnfE superfamily;gbkey=misc_feature;gene=nqrB;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100779 101988 . - . ID=id-GGE_0366-3;Dbxref=InterPro:IPR010966;Note=HAMAP:MF_00426~nqrb~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C b subunit;gbkey=misc_feature;gene=nqrB;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100782 101982 . - . ID=id-GGE_0366-4;Dbxref=InterPro:IPR010966,TIGRFAM:TIGR01937;Note=nqrb: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh ubiquinone oxidoreductase%2C na(+)-translocating%2C b subunit;gbkey=misc_feature;gene=nqrB;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100890 101874 . - . ID=id-GGE_0366-5;Dbxref=InterPro:IPR004338,PFAM:PF03116;Note=nqr2_rnfd_rnfe~nadh-quinone reductase nqr2/rnfd;gbkey=misc_feature;gene=nqrB;locus_tag=GGE_0366 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100827 101838 . + . ID=id-AFQR01000007.1:100827..101838;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100833 101742 . + . ID=id-AFQR01000007.1:100833..101742;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100833 101655 . + . ID=id-AFQR01000007.1:100833..101655;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100842 101901 . + . ID=id-AFQR01000007.1:100842..101901;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100842 101568 . + . ID=id-AFQR01000007.1:100842..101568;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100842 101241 . + . ID=id-AFQR01000007.1:100842..101241;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100842 101139 . + . ID=id-AFQR01000007.1:100842..101139;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 100842 100947 . + . ID=id-AFQR01000007.1:100842..100947;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 101302 101311 . + . ID=id-AFQR01000007.1:101302..101311;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 102011 103435 . - . ID=gene-GGE_0367;Name=nqrA;gbkey=Gene;gene=nqrA;gene_biotype=protein_coding;locus_tag=GGE_0367 GCA_000222085.2|AFQR01000007.1 Genbank CDS 102011 103435 . - 0 ID=cds-EGT83004.1;Parent=gene-GGE_0367;Dbxref=GeneID:81336814,InterPro:IPR008703,InterPro:IPR022615,PFAM:PF05896,PFAM:PF11973,TIGRFAM:TIGR01936,NCBI_GP:EGT83004.1;Name=EGT83004.1;Ontology_term=GO:0055114,GO:0006814,GO:0016655;gbkey=CDS;gene=nqrA;go_function=oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor|0016655||;go_process=oxidation-reduction process|0055114||,sodium ion transport|0006814||;locus_tag=GGE_0367;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=EGT83004.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102011 103433 . - . ID=id-GGE_0367;Dbxref=InterPro:IPR008703;Note=HAMAP:MF_00425~nqra~nadh-quinone reductase%2C na(+)-translocating%2C subunit a;gbkey=misc_feature;gene=nqrA;locus_tag=GGE_0367 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102092 103355 . - . ID=id-GGE_0367-2;Note=multi-dom%3B label: PRK05352;gbkey=misc_feature;gene=nqrA;locus_tag=GGE_0367 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102095 102785 . - . ID=id-GGE_0367-3;Dbxref=InterPro:IPR008703,PFAM:PF05896;Note=nqra~nadh-quinone reductase%2C na(+)-translocating%2C subunit a;gbkey=misc_feature;gene=nqrA;locus_tag=GGE_0367 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102098 103349 . - . ID=id-GGE_0367-4;Dbxref=InterPro:IPR008703,TIGRFAM:TIGR01936;Note=nqra: nadh:ubiquinone oxidoreductase%2C na(+)-~nadh-quinone reductase%2C na(+)-translocating%2C subunit a;gbkey=misc_feature;gene=nqrA;locus_tag=GGE_0367 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102056 103316 . + . ID=id-AFQR01000007.1:102056..103316;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102161 102881 . + . ID=id-AFQR01000007.1:102161..102881;Dbxref=InterPro:IPR022615,PFAM:PF11973;Note=nqra_slbb~nadh-quinone reductase%2C na(+)-translocating%2C subunit a;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 102164 102881 . + . ID=id-AFQR01000007.1:102164..102881;Note=superfamily%3B label: NQRA_SLBB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 103648 103959 . - . ID=gene-GGE_0368;Name=GGE_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank CDS 103648 103959 . - 0 ID=cds-EGT83005.1;Parent=gene-GGE_0368;Dbxref=GeneID:301154872,InterPro:IPR002634,PFAM:PF01722,PIR:PIRSF003113,NCBI_GP:EGT83005.1;Name=EGT83005.1;Note=CBW14335;gbkey=CDS;locus_tag=GGE_0368;product=regulator of penicillin binding proteins and beta lactamase transcription morphogene;protein_id=EGT83005.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103648 103954 . - . ID=id-GGE_0368;Note=superfamily%3B label: BolA superfamily;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103648 103951 . - . ID=id-GGE_0368-2;Dbxref=InterPro:IPR002634;Note=Gene3D:3.30.300.90~bola protein;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103648 103921 . - . ID=id-GGE_0368-3;Dbxref=InterPro:IPR002634;Note=superfamily:SSF82657~bola-like~bola protein;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103648 103915 . - . ID=id-GGE_0368-4;Dbxref=InterPro:IPR002634,PIR:PIRSF003113;Note=stress-induced morphoprotein%2C bola type~bola protein;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103648 103903 . - . ID=id-GGE_0368-5;Dbxref=InterPro:IPR002634;Note=HMMPanther:PTHR12735~family not named~bola protein;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103681 103873 . - . ID=id-GGE_0368-6;Dbxref=InterPro:IPR002634,PFAM:PF01722;Note=bola~bola protein;gbkey=misc_feature;locus_tag=GGE_0368 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 103902 103911 . + . ID=id-AFQR01000007.1:103902..103911;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 104052 104651 . + . ID=gene-GGE_0369;Name=GGE_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank CDS 104052 104651 . + 0 ID=cds-EGT83006.1;Parent=gene-GGE_0369;Dbxref=InterPro:IPR005619,PFAM:PF03923,NCBI_GP:EGT83006.1;Name=EGT83006.1;Note=HI_0162;gbkey=CDS;locus_tag=GGE_0369;product=putative lipoprotein;protein_id=EGT83006.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104052 104649 . + . ID=id-GGE_0369;Note=multi-dom%3B label: COG3056;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104052 104127 . + . ID=id-GGE_0369-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104160 104532 . + . ID=id-GGE_0369-3;Note=superfamily%3B label: Lipoprotein_16 superfamily;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104160 104529 . + . ID=id-GGE_0369-4;Dbxref=InterPro:IPR005619,PFAM:PF03923;Note=lipoprotein_16~uncharacterised protein family%2C yajg;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104178 104637 . + . ID=id-GGE_0369-5;Note=superfamily%3B label: Lipoprotein_16 superfamily;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104184 104631 . + . ID=id-GGE_0369-6;Dbxref=InterPro:IPR005619,PFAM:PF03923;Note=lipoprotein_16~uncharacterised protein family%2C yajg;gbkey=misc_feature;locus_tag=GGE_0369 GCA_000222085.2|AFQR01000007.1 Genbank gene 104994 105305 . + . ID=gene-GGE_0370;Name=GGE_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank CDS 104994 105305 . + 0 ID=cds-EGT83007.1;Parent=gene-GGE_0370;Dbxref=InterPro:IPR001327,PFAM:PF00070,NCBI_GP:EGT83007.1;Name=EGT83007.1;Note=Hypothetical fAD/NAD(P)-binding domain;Ontology_term=GO:0055114,GO:0050660,GO:0016491;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0370;product=putative fAD/NADP-binding domain-containing protein;protein_id=EGT83007.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104994 105267 . + . ID=id-GGE_0370;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 104994 105156 . + . ID=id-GGE_0370-2;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105000 105279 . + . ID=id-GGE_0370-3;Note=Gene3D:3.50.50.60;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105000 105276 . + . ID=id-GGE_0370-4;Note=HMMPanther:PTHR22912:SF50~subfamily not named~HMMPanther:PTHR22912~family not named;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105000 105162 . + . ID=id-GGE_0370-5;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105045 105231 . + . ID=id-GGE_0370-6;Note=multi-dom%3B label: PRK07251;gbkey=misc_feature;locus_tag=GGE_0370 GCA_000222085.2|AFQR01000007.1 Genbank gene 105356 106222 . - . ID=gene-GGE_0371;Name=GGE_0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank CDS 105356 106222 . - 0 ID=cds-EGT83008.1;Parent=gene-GGE_0371;Dbxref=GeneID:301155018,InterPro:IPR000801,PFAM:PF00756,NCBI_GP:EGT83008.1;Name=EGT83008.1;Note=CBW14481;gbkey=CDS;locus_tag=GGE_0371;product=Hypothetical protein;protein_id=EGT83008.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105377 105416 . - . ID=id-GGE_0371;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105425 106148 . - . ID=id-GGE_0371-2;Note=superfamily:SSF53474~alpha/beta-hydrolases;gbkey=misc_feature;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105449 106109 . - . ID=id-GGE_0371-3;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105497 106070 . - . ID=id-GGE_0371-4;Note=Gene3D:3.40.50.1820;gbkey=misc_feature;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105542 105962 . - . ID=id-GGE_0371-5;Dbxref=InterPro:IPR000801,PFAM:PF00756;Note=esterase~putative esterase;gbkey=misc_feature;locus_tag=GGE_0371 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105392 105824 . + . ID=id-AFQR01000007.1:105392..105824;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 105401 106031 . + . ID=id-AFQR01000007.1:105401..106031;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 106113 106122 . + . ID=id-AFQR01000007.1:106113..106122;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 106278 107888 . - . ID=gene-GGE_0372;Name=GGE_0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0372 GCA_000222085.2|AFQR01000007.1 Genbank CDS 106278 107888 . - 0 ID=cds-EGT83009.1;Parent=gene-GGE_0372;Dbxref=GeneID:183600606,InterPro:IPR000531,PFAM:PF00593,NCBI_GP:EGT83009.1;Name=EGT83009.1;Note=ZP_02962099;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0372;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT83009.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 106278 107886 . - . ID=id-GGE_0372;Dbxref=InterPro:IPR000531;Note=specific~superfamily~superfamily:SSF56935~porins~Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel%3B label: ligand_gated_channel;gbkey=misc_feature;locus_tag=GGE_0372 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 106317 106602 . + . ID=id-AFQR01000007.1:106317..106602;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 107079 107085 . + . ID=id-AFQR01000007.1:107079..107085;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 107882 108043 . - . ID=gene-GGE_0373;Name=GGE_0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0373 GCA_000222085.2|AFQR01000007.1 Genbank CDS 107882 108043 . - 0 ID=cds-EGT83010.1;Parent=gene-GGE_0373;Dbxref=InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT83010.1;Name=EGT83010.1;Note=Hypothetical tonB-dependent receptor%2C plug;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0373;product=putative tonB-dependent receptor%2C plug;protein_id=EGT83010.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 107882 108038 . - . ID=id-GGE_0373;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=superfamily~plug~tonb-dependent receptor%2C plug%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0373 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 107882 108035 . - . ID=id-GGE_0373-2;Dbxref=InterPro:IPR012910;Note=superfamily:SSF56935~porins~Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0373 GCA_000222085.2|AFQR01000007.1 Genbank gene 108089 108343 . - . ID=gene-GGE_0374;Name=GGE_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0374 GCA_000222085.2|AFQR01000007.1 Genbank CDS 108089 108343 . - 0 ID=cds-EGT83011.1;Parent=gene-GGE_0374;Dbxref=InterPro:IPR010916,InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT83011.1;Name=EGT83011.1;Note=Hypothetical tonB-dependent receptor%2C plug;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0374;product=putative tonB-dependent receptor%2C plug;protein_id=EGT83011.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108089 108212 . - . ID=id-GGE_0374;Dbxref=InterPro:IPR010916;Note=PatternScan:PS00430~tonb_dependent_rec_1~tonb box%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0374 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108113 108143 . - . ID=id-GGE_0374-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0374 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108155 108269 . - . ID=id-GGE_0374-3;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0374 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108161 108266 . - . ID=id-GGE_0374-4;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0374 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108194 108230 . + . ID=id-AFQR01000007.1:108194..108230;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108203 108230 . + . ID=id-AFQR01000007.1:108203..108230;Note=superfamily%3B label: Plug superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108395 108404 . - . ID=id-AFQR01000007.1:108395..108404;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 108421 109209 . - . ID=gene-GGE_0375;Name=GGE_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0375 GCA_000222085.2|AFQR01000007.1 Genbank CDS 108421 109209 . - 0 ID=cds-EGT83012.1;Parent=gene-GGE_0375;Dbxref=InterPro:IPR000531,PFAM:PF00593,NCBI_GP:EGT83012.1;Name=EGT83012.1;Note=Hypothetical tonB-dependent receptor%2C beta-barrel;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0375;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT83012.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108421 109207 . - . ID=id-GGE_0375;Note=specific~superfamily%3B label: ligand_gated_channel;gbkey=misc_feature;locus_tag=GGE_0375 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108430 109201 . - . ID=id-GGE_0375-2;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_0375 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108433 109198 . - . ID=id-GGE_0375-3;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0375 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 108442 109186 . - . ID=id-GGE_0375-4;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;locus_tag=GGE_0375 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109379 109508 . + . ID=id-AFQR01000007.1:109379..109508;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 109584 111320 . - . ID=gene-GGE_0376;Name=GGE_0376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0376 GCA_000222085.2|AFQR01000007.1 Genbank CDS 109584 111320 . - 0 ID=cds-EGT83013.1;Parent=gene-GGE_0376;Dbxref=InterPro:IPR000531,InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT83013.1;Name=EGT83013.1;Note=Hypothetical tonB-dependent receptor%2C plug;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0376;product=putative tonB-dependent receptor%2C plug;protein_id=EGT83013.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109593 111048 . - . ID=id-GGE_0376;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0376 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109593 109971 . - . ID=id-GGE_0376-2;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0376 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109620 109878 . - . ID=id-GGE_0376-3;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0376 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109635 110472 . - . ID=id-GGE_0376-4;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0376 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 109809 110862 . + . ID=id-AFQR01000007.1:109809..110862;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 110199 110208 . + . ID=id-AFQR01000007.1:110199..110208;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 111770 112336 . - . ID=gene-GGE_0377;Name=GGE_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank CDS 111770 112336 . - 0 ID=cds-EGT83014.1;Parent=gene-GGE_0377;Dbxref=InterPro:IPR002491,NCBI_GP:EGT83014.1;Name=EGT83014.1;Note=Hypothetical aBC transporter protein;Ontology_term=GO:0006827,GO:0005381;gbkey=CDS;go_function=iron ion transmembrane transporter activity|0005381||;go_process=high-affinity iron ion transport|0006827||;locus_tag=GGE_0377;product=putative aBC transporter protein;protein_id=EGT83014.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112334 . - . ID=id-GGE_0377;Dbxref=InterPro:IPR002491;Note=ProfileScan:PS50983~fe_b12_pbp~abc transporter%2C periplasmic binding protein;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112331 . - . ID=id-GGE_0377-2;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112250 . - . ID=id-GGE_0377-3;Dbxref=InterPro:IPR002491;Note=ProfileScan:PS50983~fe_b12_pbp~abc transporter%2C periplasmic binding protein;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112247 . - . ID=id-GGE_0377-4;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112241 . - . ID=id-GGE_0377-5;Note=superfamily%3B label: TroA-like superfamily;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111770 112175 . - . ID=id-GGE_0377-6;Dbxref=InterPro:IPR002491,PFAM:PF01497;Note=peripla_bp_2~abc transporter%2C periplasmic binding protein;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111776 112322 . - . ID=id-GGE_0377-7;Note=superfamily%3B label: TroA-like superfamily;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111779 112253 . - . ID=id-GGE_0377-8;Dbxref=InterPro:IPR002491,PFAM:PF01497;Note=peripla_bp_2~abc transporter%2C periplasmic binding protein;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111809 112208 . - . ID=id-GGE_0377-9;Note=Gene3D:3.40.50.1980;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 111893 112208 . - . ID=id-GGE_0377-10;Note=Gene3D:3.40.50.1980;gbkey=misc_feature;locus_tag=GGE_0377 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112368 112611 . - . ID=id-AFQR01000007.1:112368..112611;Note=superfamily:SSF53807~'helical backbone' metal receptor;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112404 112581 . - . ID=id-AFQR01000007.1:112404..112581;Note=Gene3D:3.40.50.1980;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112413 112575 . - . ID=id-AFQR01000007.1:112413..112575;Note=superfamily%3B label: TroA-like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112452 112548 . - . ID=id-AFQR01000007.1:112452..112548;Dbxref=InterPro:IPR002491;Note=ProfileScan:PS50983~fe_b12_pbp~abc transporter%2C periplasmic binding protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 112904 113623 . - . ID=gene-GGE_0378;Name=GGE_0378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank CDS 112904 113623 . - 0 ID=cds-EGT83015.1;Parent=gene-GGE_0378;Dbxref=GeneID:301155706,InterPro:IPR003439,PFAM:PF00005,NCBI_GP:EGT83015.1;Name=EGT83015.1;Note=CBW15174;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0378;product=Hypothetical protein;protein_id=EGT83015.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112904 113615 . - . ID=id-GGE_0378;Note=multi-dom%3B label: CeuD;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112904 113588 . - . ID=id-GGE_0378-2;Note=HMMPanther:PTHR24220:SF171~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112904 113567 . - . ID=id-GGE_0378-3;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112904 113543 . - . ID=id-GGE_0378-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112904 113513 . - . ID=id-GGE_0378-5;Note=specific~superfamily~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: ABC_Iron-Siderophores_B12_Hemin;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 112982 113276 . - . ID=id-GGE_0378-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0378 GCA_000222085.2|AFQR01000007.1 Genbank gene 113661 114620 . - . ID=gene-GGE_0379;Name=GGE_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank CDS 113661 114620 . - 0 ID=cds-EGT83016.1;Parent=gene-GGE_0379;Dbxref=GeneID:301155705,InterPro:IPR000522,PFAM:PF01032,NCBI_GP:EGT83016.1;Name=EGT83016.1;Note=CBW15173;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0379;product=Hypothetical protein;protein_id=EGT83016.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113661 114603 . - . ID=id-GGE_0379;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113676 113730 . - . ID=id-GGE_0379-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113682 113697 . - . ID=id-GGE_0379-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113718 114558 . - . ID=id-GGE_0379-4;Note=multi-dom%3B label: CeuC;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113745 114531 . - . ID=id-GGE_0379-5;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113751 114513 . - . ID=id-GGE_0379-6;Dbxref=InterPro:IPR000522,PFAM:PF01032;Note=feccd~abc transporter%2C permease protein;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113796 114462 . - . ID=id-GGE_0379-7;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;locus_tag=GGE_0379 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113703 114198 . + . ID=id-AFQR01000007.1:113703..114198;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113721 114456 . + . ID=id-AFQR01000007.1:113721..114456;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113721 114198 . + . ID=id-AFQR01000007.1:113721..114198;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 114528 . + . ID=id-AFQR01000007.1:113730..114528;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 114345 . + . ID=id-AFQR01000007.1:113730..114345;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 114051 . + . ID=id-AFQR01000007.1:113730..114051;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 113964 . + . ID=id-AFQR01000007.1:113730..113964;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 113868 . + . ID=id-AFQR01000007.1:113730..113868;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 113730 113787 . + . ID=id-AFQR01000007.1:113730..113787;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 114753 115565 . - . ID=gene-GGE_0380;Name=GGE_0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank CDS 114753 115565 . - 0 ID=cds-EGT83017.1;Parent=gene-GGE_0380;Dbxref=InterPro:IPR000522,PFAM:PF01032,NCBI_GP:EGT83017.1;Name=EGT83017.1;Note=Hypothetical aBC transporter%2C permease protein;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0380;product=putative aBC transporter%2C permease protein;protein_id=EGT83017.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114753 115551 . - . ID=id-GGE_0380;Note=superfamily:SSF81345~abc transporter involved in vitamin b12 uptake%2C btuc;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114774 115527 . - . ID=id-GGE_0380-2;Note=Gene3D:1.10.3470.10;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114774 114822 . - . ID=id-GGE_0380-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114774 114798 . - . ID=id-GGE_0380-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114783 115521 . - . ID=id-GGE_0380-5;Dbxref=InterPro:IPR000522,PFAM:PF01032;Note=feccd~abc transporter%2C permease protein;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114903 115404 . - . ID=id-GGE_0380-6;Note=specific~superfamily%3B label: TM_ABC_iron-siderophores_like;gbkey=misc_feature;locus_tag=GGE_0380 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114755 114764 . + . ID=id-AFQR01000007.1:114755..114764;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114801 115434 . + . ID=id-AFQR01000007.1:114801..115434;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114807 115080 . + . ID=id-AFQR01000007.1:114807..115080;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114807 114900 . + . ID=id-AFQR01000007.1:114807..114900;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114813 115011 . + . ID=id-AFQR01000007.1:114813..115011;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114822 115413 . + . ID=id-AFQR01000007.1:114822..115413;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114822 115278 . + . ID=id-AFQR01000007.1:114822..115278;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 114822 115152 . + . ID=id-AFQR01000007.1:114822..115152;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 115733 117103 . + . ID=gene-GGE_0381;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank CDS 115733 117103 . + 0 ID=cds-EGT83018.1;Parent=gene-GGE_0381;Dbxref=GeneID:1170041,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006322,InterPro:IPR012999,InterPro:IPR013027,InterPro:IPR016156,PFAM:PF00070,PFAM:PF02852,PFAM:PF07992,TIGRFAM:TIGR01421,NCBI_GP:EGT83018.1;Name=EGT83018.1;Ontology_term=GO:0045454,GO:0006749,GO:0055114,GO:0005737,GO:0050661,GO:0050660,GO:0004362,GO:0016491;gbkey=CDS;gene=gor;go_component=cytoplasm|0005737||;go_function=NADP or NADPH binding|0050661||,flavin adenine dinucleotide binding|0050660||,glutathione-disulfide reductase activity|0004362||,oxidoreductase activity|0016491||;go_process=cell redox homeostasis|0045454||,glutathione metabolic process|0006749||,oxidation-reduction process|0055114||;locus_tag=GGE_0381;product=Glutathione reductase;protein_id=EGT83018.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115733 117101 . + . ID=id-GGE_0381;Note=multi-dom~HMMPanther:PTHR22912:SF50~subfamily not named~HMMPanther:PTHR22912~family not named%3B label: PRK06116;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115733 116870 . + . ID=id-GGE_0381-2;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115742 117095 . + . ID=id-GGE_0381-3;Dbxref=InterPro:IPR006322,TIGRFAM:TIGR01421;Note=gluta_reduc_1: glutathione-disulfide re~glutathione reductase%2C eukaryote/bacterial;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115742 116156 . + . ID=id-GGE_0381-4;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115751 116651 . + . ID=id-GGE_0381-5;Dbxref=InterPro:IPR013027,PFAM:PF07992;Note=pyr_redox_2~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115751 115802 . + . ID=id-GGE_0381-6;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115754 115793 . + . ID=id-GGE_0381-7;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115757 115769 . + . ID=id-GGE_0381-8;Note=seg;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 116165 116297 . + . ID=id-GGE_0381-9;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=gor;locus_tag=GGE_0381 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115757 116642 . - . ID=id-AFQR01000007.1:115757..116642;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115763 116153 . - . ID=id-AFQR01000007.1:115763..116153;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115766 115850 . - . ID=id-AFQR01000007.1:115766..115850;Dbxref=InterPro:IPR012999;Note=PatternScan:PS00076~pyridine_redox_1~pyridine nucleotide-disulfide oxidoreductase%2C class i%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115778 116513 . - . ID=id-AFQR01000007.1:115778..116513;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115781 116957 . - . ID=id-AFQR01000007.1:115781..116957;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115781 115847 . - . ID=id-AFQR01000007.1:115781..115847;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115784 116510 . - . ID=id-AFQR01000007.1:115784..116510;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115790 116255 . - . ID=id-AFQR01000007.1:115790..116255;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115790 116144 . - . ID=id-AFQR01000007.1:115790..116144;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115796 117023 . - . ID=id-AFQR01000007.1:115796..117023;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115799 116756 . - . ID=id-AFQR01000007.1:115799..116756;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115802 116597 . - . ID=id-AFQR01000007.1:115802..116597;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115811 116255 . - . ID=id-AFQR01000007.1:115811..116255;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115961 116255 . - . ID=id-AFQR01000007.1:115961..116255;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 115970 116255 . - . ID=id-AFQR01000007.1:115970..116255;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 116069 116768 . - . ID=id-AFQR01000007.1:116069..116768;Dbxref=InterPro:IPR004099,PFAM:PF02852;Note=superfamily~pyr_redox_dim~pyridine nucleotide-disulfide oxidoreductase%2C dimerization%3B label: Pyr_redox_dim superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 116078 116759 . - . ID=id-AFQR01000007.1:116078..116759;Dbxref=InterPro:IPR016156;Note=superfamily:SSF55424~fad/nad-linked reductases%2C dimerization (c-terminal) domain~fad/nad-linked reductase%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 116108 116729 . - . ID=id-AFQR01000007.1:116108..116729;Dbxref=InterPro:IPR004099;Note=Gene3D:3.30.390.30~pyridine nucleotide-disulfide oxidoreductase%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 118431 119798 . - . ID=gene-GGE_0382;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank CDS 118431 119798 . - 0 ID=cds-EGT83019.1;Parent=gene-GGE_0382;Dbxref=GeneID:2501150,InterPro:IPR004644,InterPro:IPR005130,InterPro:IPR005131,PFAM:PF03313,PFAM:PF03315,TIGRFAM:TIGR00720,NCBI_GP:EGT83019.1;Name=EGT83019.1;Ontology_term=GO:0006094,GO:0051539,GO:0003941;gbkey=CDS;gene=sdaA;go_function=4 iron 4 sulfur cluster binding|0051539||,L-serine ammonia-lyase activity|0003941||;go_process=gluconeogenesis|0006094||;locus_tag=GGE_0382;product=L-serine dehydratase;protein_id=EGT83019.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118431 119796 . - . ID=id-GGE_0382;Dbxref=InterPro:IPR004644,TIGRFAM:TIGR00720;Note=sda_mono: l-serine ammonia-lyase~iron-sulphur-dependent l-serine dehydratase single chain form;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118437 119784 . - . ID=id-GGE_0382-2;Note=multi-dom%3B label: sda_mono;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118440 118902 . - . ID=id-GGE_0382-3;Dbxref=InterPro:IPR005131,PFAM:PF03315;Note=sdh_beta~serine dehydratase beta chain;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118461 118884 . - . ID=id-GGE_0382-4;Note=superfamily%3B label: SDH_beta superfamily;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118461 118881 . - . ID=id-GGE_0382-5;Note=Gene3D:3.30.1330.90;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118479 118866 . - . ID=id-GGE_0382-6;Note=superfamily:SSF143548~serine metabolism enzyme domain;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118983 119235 . - . ID=id-GGE_0382-7;Note=superfamily%3B label: SDH_alpha superfamily;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 118986 119229 . - . ID=id-GGE_0382-8;Dbxref=InterPro:IPR005130,PFAM:PF03313;Note=sdh_alpha~serine dehydratase-like%2C alpha subunit;gbkey=misc_feature;gene=sdaA;locus_tag=GGE_0382 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119442 119451 . + . ID=id-AFQR01000007.1:119442..119451;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 119834 121072 . - . ID=gene-GGE_0383;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=GGE_0383 GCA_000222085.2|AFQR01000007.1 Genbank CDS 119834 121072 . - 0 ID=cds-EGT83020.1;Parent=gene-GGE_0383;Dbxref=GeneID:1173406,InterPro:IPR004694,InterPro:IPR018227,PFAM:PF03222,TIGRFAM:TIGR00814,NCBI_GP:EGT83020.1;Name=EGT83020.1;Ontology_term=GO:0006810,GO:0016021,GO:0005215;gbkey=CDS;gene=sdaC;go_component=integral to membrane|0016021||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0383;product=Serine transporter;protein_id=EGT83020.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119843 121064 . - . ID=id-GGE_0383;Note=multi-dom%3B label: SdaC;gbkey=misc_feature;gene=sdaC;locus_tag=GGE_0383 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119861 121016 . - . ID=id-GGE_0383-2;Dbxref=InterPro:IPR004694,TIGRFAM:TIGR00814;Note=superfamily~stp: serine transporter~serine transporter%3B label: Aa_trans superfamily;gbkey=misc_feature;gene=sdaC;locus_tag=GGE_0383 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119870 119903 . - . ID=id-GGE_0383-3;Note=transmembrane_regions;gbkey=misc_feature;gene=sdaC;locus_tag=GGE_0383 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119894 120911 . - . ID=id-GGE_0383-4;Dbxref=InterPro:IPR018227,PFAM:PF03222;Note=trp_tyr_perm~tryptophan/tyrosine permease;gbkey=misc_feature;gene=sdaC;locus_tag=GGE_0383 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119888 120830 . + . ID=id-AFQR01000007.1:119888..120830;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119888 120311 . + . ID=id-AFQR01000007.1:119888..120311;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119888 120224 . + . ID=id-AFQR01000007.1:119888..120224;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 121001 . + . ID=id-AFQR01000007.1:119903..121001;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 120896 . + . ID=id-AFQR01000007.1:119903..120896;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 120701 . + . ID=id-AFQR01000007.1:119903..120701;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 120554 . + . ID=id-AFQR01000007.1:119903..120554;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 120392 . + . ID=id-AFQR01000007.1:119903..120392;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 120113 . + . ID=id-AFQR01000007.1:119903..120113;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 119903 119966 . + . ID=id-AFQR01000007.1:119903..119966;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 120057 120066 . + . ID=id-AFQR01000007.1:120057..120066;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121221 121230 . + . ID=id-AFQR01000007.1:121221..121230;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 121295 123466 . - . ID=gene-GGE_0384;Name=GGE_0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank CDS 121295 123466 . - 0 ID=cds-EGT83021.1;Parent=gene-GGE_0384;Dbxref=GeneID:2493017,InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006121,InterPro:IPR006403,InterPro:IPR006416,InterPro:IPR008250,InterPro:IPR017969,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023299,InterPro:IPR023300,PFAM:PF00122,PFAM:PF00403,PFAM:PF00702,TIGRFAM:TIGR01494,TIGRFAM:TIGR01511,TIGRFAM:TIGR01525,NCBI_GP:EGT83021.1;Name=EGT83021.1;Note=HI_0290;Ontology_term=GO:0006754,GO:0008152,GO:0030001,GO:0016021,GO:0016020,GO:0005524,GO:0015662,GO:0003824,GO:0004008,GO:0016820,GO:0046872,GO:0046873;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of ions phosphorylative mechanism|0015662||,catalytic activity|0003824||,copper-exporting ATPase activity|0004008||,hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances|0016820||,metal ion binding|0046872||,metal ion transmembrane transporter activity|0046873||;go_process=ATP biosynthetic process|0006754||,metabolic process|0008152||,metal ion transport|0030001||;locus_tag=GGE_0384;product=Putative cation-transporting ATPase;protein_id=EGT83021.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121295 121547 . - . ID=id-GGE_0384;Dbxref=InterPro:IPR006121;Note=superfamily:SSF55008~hma%2C heavy metal-associated domain~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121299 121308 . - . ID=id-GGE_0384-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121322 123437 . - . ID=id-GGE_0384-3;Note=HMMPanther:PTHR24093:SF113~subfamily not named~HMMPanther:PTHR24093~family not named;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121322 123431 . - . ID=id-GGE_0384-4;Note=multi-dom%3B label: ZntA;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121322 121526 . - . ID=id-GGE_0384-5;Note=Gene3D:3.30.70.100;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121325 121496 . - . ID=id-GGE_0384-6;Dbxref=InterPro:IPR006121;Note=ProfileScan:PS50846~hma_2~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121331 121487 . - . ID=id-GGE_0384-7;Note=specific~superfamily%3B label: HMA;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121334 121475 . - . ID=id-GGE_0384-8;Dbxref=InterPro:IPR006121,PFAM:PF00403;Note=hma~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121340 121385 . - . ID=id-GGE_0384-9;Dbxref=InterPro:IPR017969;Note=PatternScan:PS01047~hma_1~heavy-metal-associated%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121706 123044 . - . ID=id-GGE_0384-10;Dbxref=InterPro:IPR006403,TIGRFAM:TIGR01511;Note=atpase-ib1_cu: copper-translocating p-t~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121757 121796 . - . ID=id-GGE_0384-11;Dbxref=InterPro:IPR023300;Note=Gene3D:2.70.150.10~atpase%2C p-type%2C cytoplasmic transduction domain a;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121763 122984 . - . ID=id-GGE_0384-12;Dbxref=InterPro:IPR006416,TIGRFAM:TIGR01525;Note=atpase-ib_hvy: heavy metal translocatin~atpase%2C p-type%2C heavy metal translocating;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121790 122888 . - . ID=id-GGE_0384-13;Note=superfamily:SSF81665~calcium atpase%2C transmembrane domain m;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121874 122036 . - . ID=id-GGE_0384-14;Dbxref=InterPro:IPR001757,TIGRFAM:TIGR01494;Note=atpase_p-type: had atpase%2C p-type%2C fami~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121874 121958 . - . ID=id-GGE_0384-15;Dbxref=InterPro:IPR008250,PFAM:PF00122;Note=superfamily~e1-e2_atpase~atpase%2C p-type%2C atpase-associated domain%3B label: E1-E2_ATPase superfamily;gbkey=misc_feature;locus_tag=GGE_0384 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121316 122564 . + . ID=id-AFQR01000007.1:121316..122564;Dbxref=InterPro:IPR018303;Note=PatternScan:PS00154~atpase_e1_e2~atpase%2C p-type phosphorylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121328 122984 . + . ID=id-AFQR01000007.1:121328..122984;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121331 123392 . + . ID=id-AFQR01000007.1:121331..123392;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121334 123212 . + . ID=id-AFQR01000007.1:121334..123212;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121340 122558 . + . ID=id-AFQR01000007.1:121340..122558;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121340 122327 . + . ID=id-AFQR01000007.1:121340..122327;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121340 122108 . + . ID=id-AFQR01000007.1:121340..122108;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121340 121370 . + . ID=id-AFQR01000007.1:121340..121370;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121343 122507 . + . ID=id-AFQR01000007.1:121343..122507;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121346 121568 . + . ID=id-AFQR01000007.1:121346..121568;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121349 123074 . + . ID=id-AFQR01000007.1:121349..123074;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121352 121928 . + . ID=id-AFQR01000007.1:121352..121928;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 123392 . + . ID=id-AFQR01000007.1:121355..123392;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 123323 . + . ID=id-AFQR01000007.1:121355..123323;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 123143 . + . ID=id-AFQR01000007.1:121355..123143;Dbxref=InterPro:IPR001757;Note=FPrintScan:PR00119~catatpase~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 121868 . + . ID=id-AFQR01000007.1:121355..121868;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 121769 . + . ID=id-AFQR01000007.1:121355..121769;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121355 121580 . + . ID=id-AFQR01000007.1:121355..121580;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121358 121457 . + . ID=id-AFQR01000007.1:121358..121457;Dbxref=InterPro:IPR006403;Note=FPrintScan:PR00943~cuatpase~atpase%2C p type%2C cation/copper-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121361 122309 . + . ID=id-AFQR01000007.1:121361..122309;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121364 122417 . + . ID=id-AFQR01000007.1:121364..122417;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121364 121841 . + . ID=id-AFQR01000007.1:121364..121841;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121364 121667 . + . ID=id-AFQR01000007.1:121364..121667;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121535 122951 . + . ID=id-AFQR01000007.1:121535..122951;Note=superfamily%3B label: HAD_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121592 121964 . + . ID=id-AFQR01000007.1:121592..121964;Note=superfamily:SSF81653~calcium atpase%2C transduction domain a;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121601 122627 . + . ID=id-AFQR01000007.1:121601..122627;Dbxref=InterPro:IPR023299;Note=Gene3D:3.40.1110.10~atpase%2C p-type%2C cytoplasmic domain n;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121718 122933 . + . ID=id-AFQR01000007.1:121718..122933;Dbxref=InterPro:IPR023214;Note=Gene3D:3.40.50.1000~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121823 122888 . + . ID=id-AFQR01000007.1:121823..122888;Dbxref=InterPro:IPR001757,TIGRFAM:TIGR01494;Note=atpase_p-type: had atpase%2C p-type%2C fami~atpase%2C p-type%2C k/mg/cd/cu/zn/na/ca/na/h-transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 121937 122546 . + . ID=id-AFQR01000007.1:121937..122546;Dbxref=InterPro:IPR005834,PFAM:PF00702;Note=hydrolase~haloacid dehalogenase-like hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 122010 122019 . + . ID=id-AFQR01000007.1:122010..122019;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 122057 122519 . + . ID=id-AFQR01000007.1:122057..122519;Dbxref=InterPro:IPR023214;Note=superfamily:SSF56784~had-like~had-like domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 123441 123647 . - . ID=gene-GGE_0385;Name=GGE_0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank CDS 123441 123647 . - 0 ID=cds-EGT83022.1;Parent=gene-GGE_0385;Dbxref=InterPro:IPR006121,InterPro:IPR017969,PFAM:PF00403,NCBI_GP:EGT83022.1;Name=EGT83022.1;Note=HI_0292;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||;go_process=metal ion transport|0030001||;locus_tag=GGE_0385;product=putative heavy-metal-associated;protein_id=EGT83022.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123441 123642 . - . ID=id-GGE_0385;Dbxref=InterPro:IPR006121;Note=Gene3D:3.30.70.100~superfamily:SSF55008~hma%2C heavy metal-associated domain~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123450 123639 . - . ID=id-GGE_0385-2;Dbxref=InterPro:IPR006121;Note=ProfileScan:PS50846~hma_2~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123456 123630 . - . ID=id-GGE_0385-3;Note=specific~superfamily%3B label: HMA;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123456 123624 . - . ID=id-GGE_0385-4;Dbxref=InterPro:IPR006121,PFAM:PF00403;Note=hma~heavy metal transport/detoxification protein;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123459 123624 . - . ID=id-GGE_0385-5;Note=HMMPanther:PTHR24093:SF39~subfamily not named~HMMPanther:PTHR24093~family not named;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123465 123531 . - . ID=id-GGE_0385-6;Dbxref=InterPro:IPR017969;Note=PatternScan:PS01047~hma_1~heavy-metal-associated%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0385 GCA_000222085.2|AFQR01000007.1 Genbank gene 123724 124110 . + . ID=gene-GGE_0386;Name=GGE_0386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank CDS 123724 124110 . + 0 ID=cds-EGT83023.1;Parent=gene-GGE_0386;Dbxref=GeneID:1175213,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR015358,PFAM:PF00376,PFAM:PF09278,NCBI_GP:EGT83023.1;Name=EGT83023.1;Note=HI_0293;Ontology_term=GO:0006355,GO:0000166,GO:0003700;gbkey=CDS;go_function=nucleotide binding|0000166||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0386;product=Putative heavy metal-dependent transcriptional regulator;protein_id=EGT83023.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123724 124105 . + . ID=id-GGE_0386;Note=specific~superfamily%3B label: HTH_CueR;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123724 124102 . + . ID=id-GGE_0386-2;Dbxref=InterPro:IPR009061;Note=multi-dom~superfamily:SSF46955~putative dna-binding domain~dna binding domain%2C putative%3B label: CueR;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123724 123931 . + . ID=id-GGE_0386-3;Dbxref=InterPro:IPR000551;Note=ProfileScan:PS50937~hth_merr_2~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123724 123889 . + . ID=id-GGE_0386-4;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123730 123838 . + . ID=id-GGE_0386-5;Dbxref=InterPro:IPR000551,PFAM:PF00376;Note=merr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123730 123760 . + . ID=id-GGE_0386-6;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123736 123793 . + . ID=id-GGE_0386-7;Dbxref=InterPro:IPR000551;Note=PatternScan:PS00552~hth_merr_1~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123763 123766 . + . ID=id-GGE_0386-8;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123856 123916 . + . ID=id-GGE_0386-9;Dbxref=InterPro:IPR015358,PFAM:PF09278;Note=merr-dna-bind~dna-binding protein;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123892 123940 . + . ID=id-GGE_0386-10;Note=Gene3D:1.10.1660.10;gbkey=misc_feature;locus_tag=GGE_0386 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123787 123835 . - . ID=id-AFQR01000007.1:123787..123835;Dbxref=InterPro:IPR000551;Note=FPrintScan:PR00040~hthmerr~transcription regulator hth%2C merr;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 123799 123988 . - . ID=id-AFQR01000007.1:123799..123988;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124114 124123 . + . ID=id-AFQR01000007.1:124114..124123;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 124124 124441 . - . ID=gene-GGE_0387;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=GGE_0387 GCA_000222085.2|AFQR01000007.1 Genbank CDS 124124 124441 . - 0 ID=cds-EGT83024.1;Parent=gene-GGE_0387;Dbxref=GeneID:81336689,InterPro:IPR002084,InterPro:IPR010985,InterPro:IPR023453,PFAM:PF01340,NCBI_GP:EGT83024.1;Name=EGT83024.1;Ontology_term=GO:0006555,GO:0006355,GO:0045449,GO:0003700;gbkey=CDS;gene=metJ;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=methionine metabolic process|0006555||,regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||;locus_tag=GGE_0387;product=Met repressor;protein_id=EGT83024.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124124 124439 . - . ID=id-GGE_0387;Dbxref=InterPro:IPR002084;Note=HAMAP:MF_00744~metj~methionine repressor metj;gbkey=misc_feature;gene=metJ;locus_tag=GGE_0387 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124130 124436 . - . ID=id-GGE_0387-2;Dbxref=InterPro:IPR002084,InterPro:IPR010985,PFAM:PF01340;Note=metj~methionine repressor metj~superfamily:SSF47598~ribbon-helix-helix~ribbon-helix-helix;gbkey=misc_feature;gene=metJ;locus_tag=GGE_0387 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124130 124433 . - . ID=id-GGE_0387-3;Dbxref=InterPro:IPR023453;Note=specific~superfamily~Gene3D:1.10.140.10~methionine repressor metj domain%3B label: Met_repressor_MetJ;gbkey=misc_feature;gene=metJ;locus_tag=GGE_0387 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124154 124400 . - . ID=id-GGE_0387-4;Dbxref=InterPro:IPR002084;Note=BlastProDom:PD020365~metj_haein_p44618~methionine repressor metj;gbkey=misc_feature;gene=metJ;locus_tag=GGE_0387 GCA_000222085.2|AFQR01000007.1 Genbank gene 124678 125940 . + . ID=gene-GGE_0388;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank CDS 124678 125940 . + 0 ID=cds-EGT83025.1;Parent=gene-GGE_0388;Dbxref=GeneID:1172927,InterPro:IPR000194,InterPro:IPR004665,InterPro:IPR011112,InterPro:IPR011113,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00006,PFAM:PF07497,PFAM:PF07498,TIGRFAM:TIGR00767,NCBI_GP:EGT83025.1;Name=EGT83025.1;Ontology_term=GO:0006353,GO:0005524,GO:0003723,GO:0008186,GO:0003715;gbkey=CDS;gene=rho;go_function=ATP binding|0005524||,RNA binding|0003723||,RNA-dependent ATPase activity|0008186||,transcription termination factor activity|0003715||;go_process=transcription termination DNA-dependent|0006353||;locus_tag=GGE_0388;product=Transcription termination factor Rho;protein_id=EGT83025.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124678 125935 . + . ID=id-GGE_0388;Dbxref=InterPro:IPR004665,TIGRFAM:TIGR00767;Note=multi-dom~rho~transcription termination factor rho%3B label: rho;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124678 124822 . + . ID=id-GGE_0388-2;Dbxref=InterPro:IPR011112;Note=superfamily:SSF68912~rho_n~rho termination factor~Gene3D:1.10.720.10~g3dsa:1.10.720.10;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124693 124810 . + . ID=id-GGE_0388-3;Dbxref=InterPro:IPR011112,PFAM:PF07498;Note=superfamily~rho_n~rho termination factor%3B label: Rho_N superfamily;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124825 124912 . + . ID=id-GGE_0388-4;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic_acid_ob~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124828 125788 . + . ID=id-GGE_0388-5;Note=HMMPanther:PTHR15184:SF2~pthr15184:sf2~HMMPanther:PTHR15184~pthr15184;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124828 124909 . + . ID=id-GGE_0388-6;Dbxref=InterPro:IPR011113,PFAM:PF07497;Note=rho_rna_bind~rho termination factor%2C rna-binding;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124828 124885 . + . ID=id-GGE_0388-7;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~ob_na_bd_sub~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124834 124879 . + . ID=id-GGE_0388-8;Note=specific~superfamily%3B label: Rho_CSD;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 124948 125530 . + . ID=id-GGE_0388-9;Note=superfamily:SSF52540~ssf52540;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 125137 125476 . + . ID=id-GGE_0388-10;Note=Gene3D:3.40.50.300~g3dsa:3.40.50.300;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 125149 125422 . + . ID=id-GGE_0388-11;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 125158 125296 . + . ID=id-GGE_0388-12;Dbxref=InterPro:IPR000194,PFAM:PF00006;Note=atp-synt_ab~atpase%2C alpha/beta subunit%2C nucleotide-binding domain;gbkey=misc_feature;gene=rho;locus_tag=GGE_0388 GCA_000222085.2|AFQR01000007.1 Genbank gene 125994 126686 . - . ID=gene-GGE_0389;Name=hofD;gbkey=Gene;gene=hofD;gene_biotype=protein_coding;locus_tag=GGE_0389 GCA_000222085.2|AFQR01000007.1 Genbank CDS 125994 126686 . - 0 ID=cds-EGT83026.1;Parent=gene-GGE_0389;Dbxref=GeneID:1170762,InterPro:IPR000045,PFAM:PF01478,NCBI_GP:EGT83026.1;Name=EGT83026.1;Ontology_term=GO:0016020,GO:0004190;gbkey=CDS;gene=hofD;go_component=membrane|0016020||;go_function=aspartic-type endopeptidase activity|0004190||;locus_tag=GGE_0389;product=Putative type 4 prepilin-like proteins leader peptide-processing enzyme;protein_id=EGT83026.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 125994 126684 . - . ID=id-GGE_0389;Note=multi-dom%3B label: PulO;gbkey=misc_feature;gene=hofD;locus_tag=GGE_0389 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126006 126063 . - . ID=id-GGE_0389-2;Note=transmembrane_regions;gbkey=misc_feature;gene=hofD;locus_tag=GGE_0389 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126267 126324 . - . ID=id-GGE_0389-3;Note=superfamily%3B label: Peptidase_A24 superfamily;gbkey=misc_feature;gene=hofD;locus_tag=GGE_0389 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126270 126318 . - . ID=id-GGE_0389-4;Dbxref=InterPro:IPR000045,PFAM:PF01478;Note=peptidase_a24~peptidase a24a%2C prepilin type iv;gbkey=misc_feature;gene=hofD;locus_tag=GGE_0389 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126048 126618 . + . ID=id-AFQR01000007.1:126048..126618;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126051 126246 . + . ID=id-AFQR01000007.1:126051..126246;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126054 126414 . + . ID=id-AFQR01000007.1:126054..126414;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126054 126177 . + . ID=id-AFQR01000007.1:126054..126177;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126063 126531 . + . ID=id-AFQR01000007.1:126063..126531;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126125 126134 . + . ID=id-AFQR01000007.1:126125..126134;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126533 126542 . + . ID=id-AFQR01000007.1:126533..126542;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 126683 127903 . - . ID=gene-GGE_0390;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=GGE_0390 GCA_000222085.2|AFQR01000007.1 Genbank CDS 126683 127903 . - 0 ID=cds-EGT83027.1;Parent=gene-GGE_0390;Dbxref=GeneID:1170331,InterPro:IPR001992,InterPro:IPR003004,InterPro:IPR018076,PFAM:PF00482,NCBI_GP:EGT83027.1;Name=EGT83027.1;Ontology_term=GO:0009306,GO:0015628,GO:0016020,GO:0015627,GO:0008565;gbkey=CDS;gene=hofC;go_component=membrane|0016020||,type II protein secretion system complex|0015627||;go_function=protein transporter activity|0008565||;go_process=protein secretion|0009306||,protein secretion by the type II secretion system|0015628||;locus_tag=GGE_0390;product=Protein transport protein hofC;protein_id=EGT83027.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126692 127895 . - . ID=id-GGE_0390;Note=multi-dom%3B label: PulF;gbkey=misc_feature;gene=hofC;locus_tag=GGE_0390 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126869 127055 . - . ID=id-GGE_0390-2;Dbxref=InterPro:IPR018076,PFAM:PF00482;Note=superfamily~gspii_f~type ii secretion system f domain%3B label: GSPII_F superfamily;gbkey=misc_feature;gene=hofC;locus_tag=GGE_0390 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126722 127190 . + . ID=id-AFQR01000007.1:126722..127190;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126722 126857 . + . ID=id-AFQR01000007.1:126722..126857;Dbxref=InterPro:IPR003004;Note=FPrintScan:PR00812~bcterialgspf~bacterial general secretion pathway protein f;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126728 127793 . + . ID=id-AFQR01000007.1:126728..127793;Dbxref=InterPro:IPR003004;Note=FPrintScan:PR00812~bcterialgspf~bacterial general secretion pathway protein f;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126731 127340 . + . ID=id-AFQR01000007.1:126731..127340;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126740 127817 . + . ID=id-AFQR01000007.1:126740..127817;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126743 127841 . + . ID=id-AFQR01000007.1:126743..127841;Dbxref=InterPro:IPR003004;Note=FPrintScan:PR00812~bcterialgspf~bacterial general secretion pathway protein f;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126743 127328 . + . ID=id-AFQR01000007.1:126743..127328;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126752 127814 . + . ID=id-AFQR01000007.1:126752..127814;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126752 127169 . + . ID=id-AFQR01000007.1:126752..127169;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 126770 127154 . + . ID=id-AFQR01000007.1:126770..127154;Dbxref=InterPro:IPR001992,InterPro:IPR003004;Note=PatternScan:PS00874~t2sp_f~type ii secretion system conserved site~FPrintScan:PR00812~bcterialgspf~bacterial general secretion pathway protein f;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 127019 127481 . + . ID=id-AFQR01000007.1:127019..127481;Note=superfamily%3B label: GSPII_F superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 127079 127481 . + . ID=id-AFQR01000007.1:127079..127481;Dbxref=InterPro:IPR018076,PFAM:PF00482;Note=gspii_f~type ii secretion system f domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 127900 129294 . - . ID=gene-GGE_0391;Name=hofB;gbkey=Gene;gene=hofB;gene_biotype=protein_coding;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank CDS 127900 129294 . - 0 ID=cds-EGT83028.1;Parent=gene-GGE_0391;Dbxref=GeneID:1170330,InterPro:IPR001482,InterPro:IPR007831,PFAM:PF00437,PFAM:PF05157,NCBI_GP:EGT83028.1;Name=EGT83028.1;Ontology_term=GO:0006810,GO:0005622,GO:0005524;gbkey=CDS;gene=hofB;go_component=intracellular|0005622||;go_function=ATP binding|0005524||;go_process=transport|0006810||;locus_tag=GGE_0391;product=Protein transport protein hofB;protein_id=EGT83028.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 127957 129229 . - . ID=id-GGE_0391;Note=multi-dom%3B label: PulE;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 127984 128110 . - . ID=id-GGE_0391-2;Dbxref=InterPro:IPR007831,PFAM:PF05157;Note=gspii_e_n~general secretory system ii%2C protein e;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128002 128077 . - . ID=id-GGE_0391-3;Note=superfamily%3B label: GSPII_E_N superfamily;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128091 128100 . - . ID=id-GGE_0391-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128197 128986 . - . ID=id-GGE_0391-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128203 128275 . - . ID=id-GGE_0391-6;Note=Gene3D:3.30.450.90;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128254 128734 . - . ID=id-GGE_0391-7;Dbxref=InterPro:IPR001482,PFAM:PF00437;Note=gspii_e~type ii secretion system protein e;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128431 128647 . - . ID=id-GGE_0391-8;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=hofB;locus_tag=GGE_0391 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 127945 128869 . + . ID=id-AFQR01000007.1:127945..128869;Dbxref=InterPro:IPR001482;Note=PatternScan:PS00662~t2sp_e~type ii secretion system protein e;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 128578 128605 . + . ID=id-AFQR01000007.1:128578..128605;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 129291 129731 . - . ID=gene-GGE_0392;Name=GGE_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank CDS 129291 129731 . - 0 ID=cds-EGT83029.1;Parent=gene-GGE_0392;Dbxref=GeneID:145631452,InterPro:IPR001082,InterPro:IPR001120,InterPro:IPR012902,PFAM:PF00114,PFAM:PF07963,TIGRFAM:TIGR02532,NCBI_GP:EGT83029.1;Name=EGT83029.1;Note=ZP_01787222;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||;go_process=cell adhesion|0007155||;locus_tag=GGE_0392;product=Type IV pilin subunit protein;protein_id=EGT83029.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129315 129678 . - . ID=id-GGE_0392;Note=multi-dom%3B label: PRK10574;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129321 129363 . - . ID=id-GGE_0392-2;Dbxref=InterPro:IPR012902,TIGRFAM:TIGR02532;Note=iv_pilin_gfxxxe: prepilin-type n-term~prepilin-type cleavage/methylation;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129324 129354 . - . ID=id-GGE_0392-3;Dbxref=InterPro:IPR001120;Note=PatternScan:PS00409~prokar_nter_methyl~prokaryotic n-terminal methylation site;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129324 129351 . - . ID=id-GGE_0392-4;Dbxref=InterPro:IPR012902,PFAM:PF07963;Note=n_methyl~prepilin-type cleavage/methylation;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129327 129360 . - . ID=id-GGE_0392-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129330 129666 . - . ID=id-GGE_0392-6;Note=Gene3D:3.30.700.10;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129330 129618 . - . ID=id-GGE_0392-7;Note=superfamily:SSF54523~pili subunits;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129336 129348 . - . ID=id-GGE_0392-8;Note=seg;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129417 129594 . - . ID=id-GGE_0392-9;Dbxref=InterPro:IPR001082,PFAM:PF00114;Note=pilin~fimbrial protein pilin;gbkey=misc_feature;locus_tag=GGE_0392 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129697 129712 . + . ID=id-AFQR01000007.1:129697..129712;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129800 129809 . - . ID=id-AFQR01000007.1:129800..129809;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 129846 130400 . + . ID=gene-GGE_0393;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=GGE_0393 GCA_000222085.2|AFQR01000007.1 Genbank CDS 129846 130400 . + 0 ID=cds-EGT83030.1;Parent=gene-GGE_0393;Dbxref=InterPro:IPR002502,PFAM:PF01510,NCBI_GP:EGT83030.1;Name=EGT83030.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||;go_process=peptidoglycan catabolic process|0009253||;locus_tag=GGE_0393;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=EGT83030.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129861 130386 . + . ID=id-GGE_0393;Dbxref=InterPro:IPR002502;Note=superfamily:SSF55846~n-acetylmuramoyl-l-alanine amidase-like~n-acetylmuramoyl-l-alanine amidase domain;gbkey=misc_feature;gene=ampD;locus_tag=GGE_0393 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129870 130374 . + . ID=id-GGE_0393-2;Dbxref=InterPro:IPR002502;Note=Gene3D:3.40.80.10~n-acetylmuramoyl-l-alanine amidase domain;gbkey=misc_feature;gene=ampD;locus_tag=GGE_0393 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129924 130290 . + . ID=id-GGE_0393-3;Dbxref=InterPro:IPR002502,PFAM:PF01510;Note=amidase_2~n-acetylmuramoyl-l-alanine amidase domain;gbkey=misc_feature;gene=ampD;locus_tag=GGE_0393 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 129942 130272 . + . ID=id-GGE_0393-4;Note=specific~superfamily%3B label: PGRP;gbkey=misc_feature;gene=ampD;locus_tag=GGE_0393 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130650 130659 . - . ID=id-AFQR01000007.1:130650..130659;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130679 130688 . + . ID=id-AFQR01000007.1:130679..130688;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 130926 131516 . + . ID=gene-GGE_0394;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank CDS 130926 131516 . + 0 ID=cds-EGT83031.1;Parent=gene-GGE_0394;Dbxref=InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,InterPro:IPR022927,PFAM:PF00293,NCBI_GP:EGT83031.1;Name=EGT83031.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||;locus_tag=GGE_0394;product=RNA pyrophosphohydrolase;protein_id=EGT83031.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130926 131394 . + . ID=id-GGE_0394;Dbxref=InterPro:IPR022927;Note=HAMAP:MF_00298~nudix_rpph~rna pyrophosphohydrolase rpph;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130926 131391 . + . ID=id-GGE_0394-2;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130932 131307 . + . ID=id-GGE_0394-3;Note=HMMPanther:PTHR22769~family not named;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130944 131364 . + . ID=id-GGE_0394-4;Note=specific~superfamily%3B label: Ap4A_hydrolase_plant_like;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130944 131361 . + . ID=id-GGE_0394-5;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130944 131358 . + . ID=id-GGE_0394-6;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130947 131349 . + . ID=id-GGE_0394-7;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;gene=rppH;locus_tag=GGE_0394 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130962 131151 . - . ID=id-AFQR01000007.1:130962..131151;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130971 131025 . - . ID=id-AFQR01000007.1:130971..131025;Dbxref=InterPro:IPR020476;Note=FPrintScan:PR00502~nudixfamily~nudix hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130974 131067 . - . ID=id-AFQR01000007.1:130974..131067;Dbxref=InterPro:IPR020476;Note=FPrintScan:PR00502~nudixfamily~nudix hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 130992 131040 . - . ID=id-AFQR01000007.1:130992..131040;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 131516 132313 . + . ID=gene-GGE_0395;Name=GGE_0395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0395 GCA_000222085.2|AFQR01000007.1 Genbank CDS 131516 132313 . + 0 ID=cds-EGT83032.1;Parent=gene-GGE_0395;Dbxref=GeneID:301169621,InterPro:IPR002781,PFAM:PF01925,NCBI_GP:EGT83032.1;Name=EGT83032.1;Note=CBW29222;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_0395;product=Putative permease;protein_id=EGT83032.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131543 132278 . + . ID=id-GGE_0395;Dbxref=InterPro:IPR002781,PFAM:PF01925;Note=taue~protein of unknown function duf81;gbkey=misc_feature;locus_tag=GGE_0395 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131543 131624 . + . ID=id-GGE_0395-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0395 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131561 131585 . + . ID=id-GGE_0395-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0395 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131669 132161 . + . ID=id-GGE_0395-4;Note=superfamily%3B label: COG0730 superfamily;gbkey=misc_feature;locus_tag=GGE_0395 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131576 132149 . - . ID=id-AFQR01000007.1:131576..132149;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131582 131942 . - . ID=id-AFQR01000007.1:131582..131942;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131585 132053 . - . ID=id-AFQR01000007.1:131585..132053;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131585 131948 . - . ID=id-AFQR01000007.1:131585..131948;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131585 131837 . - . ID=id-AFQR01000007.1:131585..131837;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131585 131750 . - . ID=id-AFQR01000007.1:131585..131750;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 131585 131654 . - . ID=id-AFQR01000007.1:131585..131654;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 132322 133128 . + . ID=gene-GGE_0396;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank CDS 132322 133128 . + 0 ID=cds-EGT83033.1;Parent=gene-GGE_0396;Dbxref=GeneID:81336083,InterPro:IPR001640,PFAM:PF01790,TIGRFAM:TIGR00544,NCBI_GP:EGT83033.1;Name=EGT83033.1;Ontology_term=GO:0042158,GO:0009249,GO:0016020,GO:0016757;gbkey=CDS;gene=lgt;go_component=membrane|0016020||;go_function=transferase activity transferring glycosyl groups|0016757||;go_process=lipoprotein biosynthetic process|0042158||,protein lipoylation|0009249||;locus_tag=GGE_0396;product=Prolipoprotein diacylglyceryl transferase;protein_id=EGT83033.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132322 133126 . + . ID=id-GGE_0396;Dbxref=InterPro:IPR001640,TIGRFAM:TIGR00544;Note=lgt: prolipoprotein diacylglyceryl transfera~prolipoprotein diacylglyceryl transferase;gbkey=misc_feature;gene=lgt;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132331 133120 . + . ID=id-GGE_0396-2;Note=superfamily%3B label: LGT superfamily;gbkey=misc_feature;gene=lgt;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132352 133084 . + . ID=id-GGE_0396-3;Dbxref=InterPro:IPR001640;Note=HAMAP:MF_01147~lgt~prolipoprotein diacylglyceryl transferase;gbkey=misc_feature;gene=lgt;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132355 133072 . + . ID=id-GGE_0396-4;Dbxref=InterPro:IPR001640,PFAM:PF01790;Note=lgt~prolipoprotein diacylglyceryl transferase;gbkey=misc_feature;gene=lgt;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133108 133117 . + . ID=id-GGE_0396-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=lgt;locus_tag=GGE_0396 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132361 132754 . - . ID=id-AFQR01000007.1:132361..132754;Dbxref=InterPro:IPR001640;Note=PatternScan:PS01311~lgt~prolipoprotein diacylglyceryl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132376 132940 . - . ID=id-AFQR01000007.1:132376..132940;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132382 132862 . - . ID=id-AFQR01000007.1:132382..132862;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132382 132625 . - . ID=id-AFQR01000007.1:132382..132625;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132382 132508 . - . ID=id-AFQR01000007.1:132382..132508;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132382 132391 . - . ID=id-AFQR01000007.1:132382..132391;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132391 133036 . - . ID=id-AFQR01000007.1:132391..133036;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 132391 132721 . - . ID=id-AFQR01000007.1:132391..132721;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 133138 133989 . + . ID=gene-GGE_0397;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=GGE_0397 GCA_000222085.2|AFQR01000007.1 Genbank CDS 133138 133989 . + 0 ID=cds-EGT83034.1;Parent=gene-GGE_0397;Dbxref=GeneID:166231705,InterPro:IPR000398,InterPro:IPR020940,InterPro:IPR023451,PFAM:PF00303,TIGRFAM:TIGR03284,NCBI_GP:EGT83034.1;Name=EGT83034.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||;go_process=dTMP biosynthetic process|0006231||;locus_tag=GGE_0397;product=Thymidylate synthase;protein_id=EGT83034.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133138 133987 . + . ID=id-GGE_0397;Dbxref=InterPro:IPR000398,InterPro:IPR023451;Note=Gene3D:3.30.572.10~thymidylate synthase/dcmp hydroxymethylase domain~superfamily:SSF55831~thymidylate synthase/dcmp hydroxymethylase~thymidylate synthase/dcmp hydroxymethylase domain~HAMAP:MF_00008~thymidy_synth_bact~thymidylate synthase;gbkey=misc_feature;gene=thyA;locus_tag=GGE_0397 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133144 133984 . + . ID=id-GGE_0397-2;Dbxref=InterPro:IPR000398,PFAM:PF00303,TIGRFAM:TIGR03284;Note=thymidylat_synt~thymidylate synthase~HMMPanther:PTHR11549:SF2~bifunctional dihydrofolate reductase-thymidylate synthase~thymidylate synthase~HMMPanther:PTHR11549~family not named~thym_sym: thymidylate synthase~thymidylate synthase;gbkey=misc_feature;gene=thyA;locus_tag=GGE_0397 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133147 133825 . + . ID=id-GGE_0397-3;Note=specific~superfamily%3B label: TS_Pyrimidine_HMase;gbkey=misc_feature;gene=thyA;locus_tag=GGE_0397 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133174 133390 . - . ID=id-AFQR01000007.1:133174..133390;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133192 133771 . - . ID=id-AFQR01000007.1:133192..133771;Dbxref=InterPro:IPR000398;Note=FPrintScan:PR00108~thymdsnthase~thymidylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133198 133525 . - . ID=id-AFQR01000007.1:133198..133525;Dbxref=InterPro:IPR000398;Note=FPrintScan:PR00108~thymdsnthase~thymidylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133204 133270 . - . ID=id-AFQR01000007.1:133204..133270;Dbxref=InterPro:IPR000398;Note=FPrintScan:PR00108~thymdsnthase~thymidylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133219 133657 . - . ID=id-AFQR01000007.1:133219..133657;Dbxref=InterPro:IPR000398;Note=FPrintScan:PR00108~thymdsnthase~thymidylate synthase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 133225 133558 . - . ID=id-AFQR01000007.1:133225..133558;Dbxref=InterPro:IPR020940;Note=PatternScan:PS00091~thymidylate_synthase~thymidylate synthase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 133989 134504 . + . ID=gene-GGE_0398;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank CDS 133989 134504 . + 0 ID=cds-EGT83035.1;Parent=gene-GGE_0398;Dbxref=GeneID:1175980,InterPro:IPR002125,InterPro:IPR016192,InterPro:IPR016193,PFAM:PF00383,NCBI_GP:EGT83035.1;Name=EGT83035.1;Ontology_term=GO:0003824,GO:0016787,GO:0008270;gbkey=CDS;gene=tadA;go_function=catalytic activity|0003824||,hydrolase activity|0016787||,zinc ion binding|0008270||;locus_tag=GGE_0398;product=tRNA-specific adenosine deaminase;protein_id=EGT83035.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134000 134009 . + . ID=id-GGE_0398;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134007 134466 . + . ID=id-GGE_0398-2;Dbxref=InterPro:IPR016193;Note=superfamily:SSF53927~cytidine deaminase-like~cytidine deaminase-like;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134007 134451 . + . ID=id-GGE_0398-3;Note=Gene3D:3.40.140.10;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134019 134289 . + . ID=id-GGE_0398-4;Dbxref=InterPro:IPR002125,PFAM:PF00383;Note=dcmp_cyt_deam_1~cmp/dcmp deaminase%2C zinc-binding;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134022 134460 . + . ID=id-GGE_0398-5;Note=HMMPanther:PTHR11079:SF11~subfamily not named~HMMPanther:PTHR11079~family not named;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134034 134316 . + . ID=id-GGE_0398-6;Note=specific~superfamily%3B label: cytidine_deaminase-like superfamily;gbkey=misc_feature;gene=tadA;locus_tag=GGE_0398 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134034 134454 . - . ID=id-AFQR01000007.1:134034..134454;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134103 134172 . - . ID=id-AFQR01000007.1:134103..134172;Dbxref=InterPro:IPR016192;Note=PatternScan:PS00903~cyt_dcmp_deaminases~apobec/cmp deaminase%2C zinc-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 134539 134853 . - . ID=gene-GGE_0399;Name=GGE_0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0399 GCA_000222085.2|AFQR01000007.1 Genbank CDS 134539 134853 . - 0 ID=cds-EGT83036.1;Parent=gene-GGE_0399;Dbxref=GeneID:1175327,InterPro:IPR007922,PFAM:PF05258,NCBI_GP:EGT83036.1;Name=EGT83036.1;Note=HI_0907;gbkey=CDS;locus_tag=GGE_0399;product=hypothetical protein;protein_id=EGT83036.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134539 134851 . - . ID=id-GGE_0399;Note=superfamily%3B label: DUF721 superfamily;gbkey=misc_feature;locus_tag=GGE_0399 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134581 134794 . - . ID=id-GGE_0399-2;Dbxref=InterPro:IPR007922,PFAM:PF05258;Note=duf721~protein of unknown function duf721/upf0232;gbkey=misc_feature;locus_tag=GGE_0399 GCA_000222085.2|AFQR01000007.1 Genbank gene 134932 135234 . + . ID=gene-GGE_0400;Name=GGE_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0400 GCA_000222085.2|AFQR01000007.1 Genbank CDS 134932 135234 . + 0 ID=cds-EGT83037.1;Parent=gene-GGE_0400;Dbxref=InterPro:IPR020508,PFAM:PF10818,NCBI_GP:EGT83037.1;Name=EGT83037.1;Note=HI_0908;gbkey=CDS;locus_tag=GGE_0400;product=hypothetical protein;protein_id=EGT83037.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134953 135211 . + . ID=id-GGE_0400;Note=superfamily%3B label: DUF2547 superfamily;gbkey=misc_feature;locus_tag=GGE_0400 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 134953 135208 . + . ID=id-GGE_0400-2;Dbxref=InterPro:IPR020508,PFAM:PF10818;Note=duf2547~protein of unknown function duf2547~BlastProDom:PD067723~q4qm01_haei8_q4qm01~protein of unknown function duf2547;gbkey=misc_feature;locus_tag=GGE_0400 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135167 135176 . - . ID=id-AFQR01000007.1:135167..135176;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 135358 138063 . + . ID=gene-GGE_0401;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank CDS 135358 138063 . + 0 ID=cds-EGT83038.1;Parent=gene-GGE_0401;Dbxref=GeneID:172048059,InterPro:IPR000185,InterPro:IPR004027,InterPro:IPR011115,InterPro:IPR011116,InterPro:IPR011130,InterPro:IPR014018,InterPro:IPR020937,PFAM:PF01043,PFAM:PF02810,PFAM:PF07516,PFAM:PF07517,TIGRFAM:TIGR00963,NCBI_GP:EGT83038.1;Name=EGT83038.1;Ontology_term=GO:0006886,GO:0017038,GO:0006605,GO:0016020,GO:0005524;gbkey=CDS;gene=secA;go_component=membrane|0016020||;go_function=ATP binding|0005524||;go_process=intracellular protein transport|0006886||,protein import|0017038||,protein targeting|0006605||;locus_tag=GGE_0401;product=Protein translocase subunit secA;protein_id=EGT83038.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135358 137812 . + . ID=id-GGE_0401;Note=multi-dom%3B label: PRK12904;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135358 137209 . + . ID=id-GGE_0401-2;Dbxref=InterPro:IPR014018;Note=ProfileScan:PS51196~seca_motor_dead~seca motor dead;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135358 136597 . + . ID=id-GGE_0401-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135367 137842 . + . ID=id-GGE_0401-4;Dbxref=InterPro:IPR000185;Note=HAMAP:MF_01382~seca~seca protein;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135373 136546 . + . ID=id-GGE_0401-5;Dbxref=InterPro:IPR011115,PFAM:PF07517;Note=seca_dead~seca dead-like;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135436 137731 . + . ID=id-GGE_0401-6;Dbxref=InterPro:IPR000185,TIGRFAM:TIGR00963;Note=seca: preprotein translocase%2C seca subunit~seca protein;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135646 135712 . + . ID=id-GGE_0401-7;Note=superfamily%3B label: DEXDc superfamily;gbkey=misc_feature;gene=secA;locus_tag=GGE_0401 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135391 135703 . - . ID=id-AFQR01000007.1:135391..135703;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135394 137818 . - . ID=id-AFQR01000007.1:135394..137818;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135400 137524 . - . ID=id-AFQR01000007.1:135400..137524;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135400 136591 . - . ID=id-AFQR01000007.1:135400..136591;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135403 135655 . - . ID=id-AFQR01000007.1:135403..135655;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135406 136852 . - . ID=id-AFQR01000007.1:135406..136852;Dbxref=InterPro:IPR020937;Note=PatternScan:PS01312~seca~seca conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135409 137854 . - . ID=id-AFQR01000007.1:135409..137854;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135409 137575 . - . ID=id-AFQR01000007.1:135409..137575;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135412 137992 . - . ID=id-AFQR01000007.1:135412..137992;Note=superfamily%3B label: SEC-C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135412 136480 . - . ID=id-AFQR01000007.1:135412..136480;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135418 137992 . - . ID=id-AFQR01000007.1:135418..137992;Dbxref=InterPro:IPR004027,PFAM:PF02810;Note=sec-c~sec-c motif;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135421 135862 . - . ID=id-AFQR01000007.1:135421..135862;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135427 136369 . - . ID=id-AFQR01000007.1:135427..136369;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135433 135541 . - . ID=id-AFQR01000007.1:135433..135541;Dbxref=InterPro:IPR000185;Note=FPrintScan:PR00906~seca~seca protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135445 137821 . - . ID=id-AFQR01000007.1:135445..137821;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135499 137905 . - . ID=id-AFQR01000007.1:135499..137905;Note=multi-dom%3B label: COG3318;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135502 136459 . - . ID=id-AFQR01000007.1:135502..136459;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135553 137854 . - . ID=id-AFQR01000007.1:135553..137854;Note=Gene3D:3.10.450.50;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135748 136039 . - . ID=id-AFQR01000007.1:135748..136039;Dbxref=InterPro:IPR011130,PFAM:PF01043;Note=seca_pp_bind~seca preprotein%2C cross-linking domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135751 136036 . - . ID=id-AFQR01000007.1:135751..136036;Note=superfamily%3B label: SecA_PP_bind superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135775 136042 . - . ID=id-AFQR01000007.1:135775..136042;Dbxref=InterPro:IPR011130;Note=Gene3D:3.90.1440.10~seca preprotein%2C cross-linking domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135784 136033 . - . ID=id-AFQR01000007.1:135784..136033;Dbxref=InterPro:IPR011130;Note=superfamily:SSF81767~pre-protein crosslinking domain of seca~seca preprotein%2C cross-linking domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135835 136639 . - . ID=id-AFQR01000007.1:135835..136639;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135910 137296 . - . ID=id-AFQR01000007.1:135910..137296;Dbxref=InterPro:IPR011116;Note=Gene3D:1.10.3060.10~seca wing/scaffold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135937 136603 . - . ID=id-AFQR01000007.1:135937..136603;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135970 137203 . - . ID=id-AFQR01000007.1:135970..137203;Note=superfamily%3B label: SecA_SW superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135970 136600 . - . ID=id-AFQR01000007.1:135970..136600;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 135997 137206 . - . ID=id-AFQR01000007.1:135997..137206;Dbxref=InterPro:IPR011116,PFAM:PF07516;Note=seca_sw~seca wing/scaffold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 136165 137212 . - . ID=id-AFQR01000007.1:136165..137212;Dbxref=InterPro:IPR011116;Note=superfamily:SSF81886~helical scaffold and wing domains of seca~seca wing/scaffold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138072 138081 . + . ID=id-AFQR01000007.1:138072..138081;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138090 138099 . - . ID=id-AFQR01000007.1:138090..138099;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 138128 138541 . + . ID=gene-GGE_0402;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank CDS 138128 138541 . + 0 ID=cds-EGT83039.1;Parent=gene-GGE_0402;Dbxref=GeneID:1171082,InterPro:IPR000086,InterPro:IPR003561,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,PFAM:PF00293,TIGRFAM:TIGR00586,NCBI_GP:EGT83039.1;Name=EGT83039.1;Ontology_term=GO:0006281,GO:0008413,GO:0016787;gbkey=CDS;gene=mutT;go_function=8-oxo-7 8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||,hydrolase activity|0016787||;go_process=DNA repair|0006281||;locus_tag=GGE_0402;product=Mutator mutT protein;protein_id=EGT83039.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138128 138539 . + . ID=id-GGE_0402;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138134 138524 . + . ID=id-GGE_0402-2;Note=HMMPanther:PTHR22769~family not named;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138134 138515 . + . ID=id-GGE_0402-3;Dbxref=InterPro:IPR003561,TIGRFAM:TIGR00586;Note=mutt: mutator mutt protein~mutator mutt;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138137 138512 . + . ID=id-GGE_0402-4;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138140 138194 . + . ID=id-GGE_0402-5;Dbxref=InterPro:IPR003561;Note=FPrintScan:PR01401~mutatormutt~mutator mutt;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138146 138506 . + . ID=id-GGE_0402-6;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138146 138500 . + . ID=id-GGE_0402-7;Note=specific~superfamily%3B label: MutT_pyrophosphohydrolase;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138155 138494 . + . ID=id-GGE_0402-8;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;gene=mutT;locus_tag=GGE_0402 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138170 138365 . - . ID=id-AFQR01000007.1:138170..138365;Dbxref=InterPro:IPR003561;Note=FPrintScan:PR01401~mutatormutt~mutator mutt;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138173 138233 . - . ID=id-AFQR01000007.1:138173..138233;Dbxref=InterPro:IPR020476;Note=FPrintScan:PR00502~nudixfamily~nudix hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138176 138275 . - . ID=id-AFQR01000007.1:138176..138275;Dbxref=InterPro:IPR020476;Note=FPrintScan:PR00502~nudixfamily~nudix hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138194 138248 . - . ID=id-AFQR01000007.1:138194..138248;Dbxref=InterPro:IPR020084;Note=PatternScan:PS00893~nudix_box~nudix hydrolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 138592 138858 . - . ID=gene-GGE_0403;Name=GGE_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0403 GCA_000222085.2|AFQR01000007.1 Genbank CDS 138592 138858 . - 0 ID=cds-EGT83040.1;Parent=gene-GGE_0403;Dbxref=GeneID:315635073,NCBI_GP:EGT83040.1;Name=EGT83040.1;Note=ZP_07890353%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_0403;product=hypothetical protein;protein_id=EGT83040.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138634 138787 . + . ID=id-AFQR01000007.1:138634..138787;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138658 138787 . + . ID=id-AFQR01000007.1:138658..138787;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 138944 139978 . - . ID=gene-GGE_0404;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank CDS 138944 139978 . - 0 ID=cds-EGT83041.1;Parent=gene-GGE_0404;Dbxref=InterPro:IPR005790,InterPro:IPR008921,InterPro:IPR010372,PFAM:PF06144,TIGRFAM:TIGR01128,NCBI_GP:EGT83041.1;Name=EGT83041.1;Ontology_term=GO:0006260,GO:0009360,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||;go_function=DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||;go_process=DNA replication|0006260||;locus_tag=GGE_0404;product=DNA polymerase III subunit delta;protein_id=EGT83041.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138944 139583 . - . ID=id-GGE_0404;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138944 139343 . - . ID=id-GGE_0404-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138953 139967 . - . ID=id-GGE_0404-3;Note=multi-dom%3B label: holA;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138995 139925 . - . ID=id-GGE_0404-4;Dbxref=InterPro:IPR005790,TIGRFAM:TIGR01128;Note=hola: dna polymerase iii%2C delta subunit~dna polymerase iii%2C delta subunit;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139007 139460 . - . ID=id-GGE_0404-5;Dbxref=InterPro:IPR010372,PFAM:PF06144;Note=dna_pol3_delta~dna polymerase iii%2C delta;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139007 139421 . - . ID=id-GGE_0404-6;Note=superfamily%3B label: DNA_pol3_delta superfamily;gbkey=misc_feature;gene=holA;locus_tag=GGE_0404 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 138983 139265 . + . ID=id-AFQR01000007.1:138983..139265;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139004 139484 . + . ID=id-AFQR01000007.1:139004..139484;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139178 139385 . + . ID=id-AFQR01000007.1:139178..139385;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139301 139619 . + . ID=id-AFQR01000007.1:139301..139619;Note=Gene3D:1.20.272.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139334 139586 . + . ID=id-AFQR01000007.1:139334..139586;Dbxref=InterPro:IPR008921;Note=superfamily:SSF48019~dna polymerase iii clamp loader subunits domain~dna polymerase iii%2C clamp loader complex%2C gamma/delta/delta subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139704 139713 . + . ID=id-AFQR01000007.1:139704..139713;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 139978 140523 . - . ID=gene-GGE_0405;Name=GGE_0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank CDS 139978 140523 . - 0 ID=cds-EGT83042.1;Parent=gene-GGE_0405;Dbxref=GeneID:325577504,InterPro:IPR007485,PFAM:PF04390,NCBI_GP:EGT83042.1;Name=EGT83042.1;Note=ZP_08147866;Ontology_term=GO:0043165,GO:0016044;gbkey=CDS;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||,cellular membrane organization|0016044||;locus_tag=GGE_0405;product=LPS-assembly lipoprotein RlpB;protein_id=EGT83042.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 139978 140080 . - . ID=id-GGE_0405;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140026 140455 . - . ID=id-GGE_0405-2;Note=superfamily%3B label: RplB superfamily;gbkey=misc_feature;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140041 140047 . - . ID=id-GGE_0405-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140080 140419 . - . ID=id-GGE_0405-4;Note=Gene3D:3.30.160.150;gbkey=misc_feature;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140080 140407 . - . ID=id-GGE_0405-5;Dbxref=InterPro:IPR007485,PFAM:PF04390;Note=rplb~lipopolysccharide assembly%2C lpte;gbkey=misc_feature;locus_tag=GGE_0405 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140110 140119 . + . ID=id-AFQR01000007.1:140110..140119;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 140577 143162 . - . ID=gene-GGE_0406;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank CDS 140577 143162 . - 0 ID=cds-EGT83043.1;Parent=gene-GGE_0406;Dbxref=GeneID:166231612,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002302,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR013155,InterPro:IPR014729,PFAM:PF00133,PFAM:PF08264,TIGRFAM:TIGR00396,NCBI_GP:EGT83043.1;Name=EGT83043.1;Ontology_term=GO:0006429,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0004823,GO:0000166;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,leucine-tRNA ligase activity|0004823||,nucleotide binding|0000166||;go_process=leucyl-tRNA aminoacylation|0006429||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0406;product=Leucyl-tRNA synthetase;protein_id=EGT83043.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140577 143157 . - . ID=id-GGE_0406;Note=multi-dom%3B label: leuS;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140577 143154 . - . ID=id-GGE_0406-2;Note=HMMPanther:PTHR11946:SF36~subfamily not named~HMMPanther:PTHR11946~family not named;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140583 142578 . - . ID=id-GGE_0406-3;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140592 143145 . - . ID=id-GGE_0406-4;Dbxref=InterPro:IPR002302,TIGRFAM:TIGR00396;Note=leus_bact: leucyl-trna synthetase~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140619 141051 . - . ID=id-GGE_0406-5;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140679 141153 . - . ID=id-GGE_0406-6;Note=specific~superfamily%3B label: LeuRS_core;gbkey=misc_feature;gene=leuS;locus_tag=GGE_0406 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140595 143055 . + . ID=id-AFQR01000007.1:140595..143055;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140610 142248 . + . ID=id-AFQR01000007.1:140610..142248;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140613 140703 . + . ID=id-AFQR01000007.1:140613..140703;Dbxref=InterPro:IPR001412;Note=PatternScan:PS00178~aa_trna_ligase_i~aminoacyl-trna synthetase%2C class i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140619 141132 . + . ID=id-AFQR01000007.1:140619..141132;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140628 141036 . + . ID=id-AFQR01000007.1:140628..141036;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140631 140958 . + . ID=id-AFQR01000007.1:140631..140958;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140634 142032 . + . ID=id-AFQR01000007.1:140634..142032;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140637 141222 . + . ID=id-AFQR01000007.1:140637..141222;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140646 142149 . + . ID=id-AFQR01000007.1:140646..142149;Dbxref=InterPro:IPR002302;Note=FPrintScan:PR00985~trnasynthleu~leucyl-trna synthetase%2C class ia%2C bacterial/mitochondrial;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140670 142428 . + . ID=id-AFQR01000007.1:140670..142428;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140682 142431 . + . ID=id-AFQR01000007.1:140682..142431;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140934 142551 . + . ID=id-AFQR01000007.1:140934..142551;Note=specific~superfamily%3B label: Anticodon_Ia_Leu_BEm;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 140943 142677 . + . ID=id-AFQR01000007.1:140943..142677;Dbxref=InterPro:IPR013155,PFAM:PF08264;Note=anticodon_1~valyl/leucyl/isoleucyl-trna synthetase%2C class i%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141021 142521 . + . ID=id-AFQR01000007.1:141021..142521;Note=Gene3D:1.10.730.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141042 141828 . + . ID=id-AFQR01000007.1:141042..141828;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141064 143249 . + . ID=id-GeneID:13027665-3;Dbxref=GeneID:13027665;Note=ISDB hit;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141114 141267 . + . ID=id-AFQR01000007.1:141114..141267;Dbxref=InterPro:IPR002300,PFAM:PF00133;Note=trna-synt_1~aminoacyl-trna synthetase%2C class ia;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141135 141258 . + . ID=id-AFQR01000007.1:141135..141258;Dbxref=InterPro:IPR009008;Note=Gene3D:3.90.740.10~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141147 141255 . + . ID=id-AFQR01000007.1:141147..141255;Dbxref=InterPro:IPR009008;Note=superfamily:SSF50677~valrs/ilers/leurs editing domain~valyl/leucyl/isoleucyl-trna synthetase%2C class ia%2C editing domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141180 142557 . + . ID=id-AFQR01000007.1:141180..142557;Dbxref=InterPro:IPR009080;Note=superfamily:SSF47323~anticodon-binding domain of a subclass of class i aminoacyl-trna synthetases~aminoacyl-trna synthetase%2C class 1a%2C anticodon-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 141351 141780 . + . ID=id-AFQR01000007.1:141351..141780;Note=superfamily%3B label: nt_trans superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143181 143190 . - . ID=id-AFQR01000007.1:143181..143190;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143263 143272 . + . ID=id-AFQR01000007.1:143263..143272;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 143291 143578 . - . ID=gene-GGE_0407;Name=GGE_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank CDS 143291 143578 . - 0 ID=cds-EGT83044.1;Parent=gene-GGE_0407;Dbxref=InterPro:IPR003746,InterPro:IPR005228,PFAM:PF02594,TIGRFAM:TIGR00251,NCBI_GP:EGT83044.1;Name=EGT83044.1;Note=MS0322;gbkey=CDS;locus_tag=GGE_0407;product=UPF0235 protein;protein_id=EGT83044.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143291 143576 . - . ID=id-GGE_0407;Dbxref=InterPro:IPR003746;Note=superfamily~superfamily:SSF69786~yggu-like~protein of unknown function duf167%3B label: DUF167 superfamily;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143291 143564 . - . ID=id-GGE_0407-2;Dbxref=InterPro:IPR003746;Note=Gene3D:3.30.1200.10~protein of unknown function duf167;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143291 143528 . - . ID=id-GGE_0407-3;Note=HMMPanther:PTHR13420~family not named;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143303 143555 . - . ID=id-GGE_0407-4;Dbxref=InterPro:IPR005228,TIGRFAM:TIGR00251;Note=tigr00251: conserved hypothetical protein t~conserved hypothetical protein chp00251;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143312 143552 . - . ID=id-GGE_0407-5;Dbxref=InterPro:IPR003746;Note=HAMAP:MF_00634~upf0235~protein of unknown function duf167;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143315 143516 . - . ID=id-GGE_0407-6;Dbxref=InterPro:IPR003746,PFAM:PF02594;Note=duf167~protein of unknown function duf167;gbkey=misc_feature;locus_tag=GGE_0407 GCA_000222085.2|AFQR01000007.1 Genbank gene 143731 144450 . + . ID=gene-GGE_0408;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank CDS 143731 144450 . + 0 ID=cds-EGT83045.1;Parent=gene-GGE_0408;Dbxref=InterPro:IPR000787,InterPro:IPR001441,InterPro:IPR018520,PFAM:PF01255,PFAM:PF02073,TIGRFAM:TIGR00055,NCBI_GP:EGT83045.1;Name=EGT83045.1;Ontology_term=GO:0006508,GO:0004177,GO:0016765;gbkey=CDS;gene=uppS;go_function=aminopeptidase activity|0004177||,transferase activity transferring alkyl or aryl (other than methyl) groups|0016765||;go_process=proteolysis|0006508||;locus_tag=GGE_0408;product=Undecaprenyl pyrophosphate synthase;protein_id=EGT83045.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143740 144442 . + . ID=id-GGE_0408;Dbxref=InterPro:IPR001441;Note=HMMPanther:PTHR10291~dehydrodolichyl diphosphate synthase~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143743 144433 . + . ID=id-GGE_0408-2;Dbxref=InterPro:IPR001441;Note=Gene3D:3.40.1180.10~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143746 144415 . + . ID=id-GGE_0408-3;Dbxref=InterPro:IPR001441;Note=superfamily:SSF64005~undecaprenyl diphosphate synthase~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143752 144424 . + . ID=id-GGE_0408-4;Dbxref=InterPro:IPR001441;Note=HAMAP:MF_01139~upps~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143758 144415 . + . ID=id-GGE_0408-5;Dbxref=InterPro:IPR001441,TIGRFAM:TIGR00055;Note=upps: di-trans%2Cpoly-cis-decaprenylcistransfe~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143758 144244 . + . ID=id-GGE_0408-6;Dbxref=InterPro:IPR000787,PFAM:PF02073;Note=peptidase_m29~peptidase m29%2C aminopeptidase ii;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143761 144394 . + . ID=id-GGE_0408-7;Note=specific~superfamily%3B label: CIS_IPPS;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143779 144394 . + . ID=id-GGE_0408-8;Dbxref=InterPro:IPR001441,PFAM:PF01255;Note=prenyltransf~di-trans-poly-cis-decaprenylcistransferase-like;gbkey=misc_feature;gene=uppS;locus_tag=GGE_0408 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143767 144187 . - . ID=id-AFQR01000007.1:143767..144187;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143785 144277 . - . ID=id-AFQR01000007.1:143785..144277;Dbxref=InterPro:IPR018520;Note=PatternScan:PS01066~upp_synthase~di-trans-poly-cis-decaprenylcistransferase-like%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 143818 144046 . - . ID=id-AFQR01000007.1:143818..144046;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 144472 145338 . + . ID=gene-GGE_0409;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank CDS 144472 145338 . + 0 ID=cds-EGT83046.1;Parent=gene-GGE_0409;Dbxref=GeneID:1168876,InterPro:IPR000374,PFAM:PF01148,NCBI_GP:EGT83046.1;Name=EGT83046.1;Ontology_term=GO:0016020,GO:0016772;gbkey=CDS;gene=cdsA;go_component=membrane|0016020||;go_function=transferase activity transferring phosphorus-containing groups|0016772||;locus_tag=GGE_0409;product=Phosphatidate cytidylyltransferase;protein_id=EGT83046.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144472 145333 . + . ID=id-GGE_0409;Note=superfamily%3B label: CTP_transf_1 superfamily;gbkey=misc_feature;gene=cdsA;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144481 145321 . + . ID=id-GGE_0409-2;Dbxref=InterPro:IPR000374,PFAM:PF01148;Note=ctp_transf_1~phosphatidate cytidylyltransferase;gbkey=misc_feature;gene=cdsA;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144490 145309 . + . ID=id-GGE_0409-3;Note=HMMPanther:PTHR13773~family not named;gbkey=misc_feature;gene=cdsA;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144499 144517 . + . ID=id-GGE_0409-4;Note=seg;gbkey=misc_feature;gene=cdsA;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144502 144541 . + . ID=id-GGE_0409-5;Note=transmembrane_regions;gbkey=misc_feature;gene=cdsA;locus_tag=GGE_0409 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144505 144931 . - . ID=id-AFQR01000007.1:144505..144931;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144508 144559 . - . ID=id-AFQR01000007.1:144508..144559;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144511 144754 . - . ID=id-AFQR01000007.1:144511..144754;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144526 145141 . - . ID=id-AFQR01000007.1:144526..145141;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144532 145054 . - . ID=id-AFQR01000007.1:144532..145054;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144532 144628 . - . ID=id-AFQR01000007.1:144532..144628;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144541 144928 . - . ID=id-AFQR01000007.1:144541..144928;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144541 144832 . - . ID=id-AFQR01000007.1:144541..144832;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144541 144730 . - . ID=id-AFQR01000007.1:144541..144730;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 144553 145207 . - . ID=id-AFQR01000007.1:144553..145207;Dbxref=InterPro:IPR000374;Note=PatternScan:PS01315~cds~phosphatidate cytidylyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 145348 146679 . + . ID=gene-GGE_0410;Name=GGE_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank CDS 145348 146679 . + 0 ID=cds-EGT83047.1;Parent=gene-GGE_0410;Dbxref=GeneID:1175509,InterPro:IPR001478,InterPro:IPR004387,InterPro:IPR008915,PFAM:PF00595,PFAM:PF02163,TIGRFAM:TIGR00054,NCBI_GP:EGT83047.1;Name=EGT83047.1;Note=HI_0918;Ontology_term=GO:0006508,GO:0016021,GO:0004222,GO:0005515;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=metalloendopeptidase activity|0004222||,protein binding|0005515||;go_process=proteolysis|0006508||;locus_tag=GGE_0410;product=Putative zinc metalloprotease;protein_id=EGT83047.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145348 146677 . + . ID=id-GGE_0410;Dbxref=InterPro:IPR004387,TIGRFAM:TIGR00054;Note=multi-dom~tigr00054: rip metalloprotease rsep~peptidase m50%2C putative membrane-associated zinc metallopeptidase%3B label: PRK10779;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145369 145417 . + . ID=id-GGE_0410-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145375 145678 . + . ID=id-GGE_0410-3;Note=specific~superfamily%3B label: S2P-M50 superfamily;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145378 146638 . + . ID=id-GGE_0410-4;Dbxref=InterPro:IPR008915,PFAM:PF02163;Note=peptidase_m50~peptidase m50;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145436 145445 . + . ID=id-GGE_0410-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145603 145681 . + . ID=id-GGE_0410-6;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145624 146317 . + . ID=id-GGE_0410-7;Note=HMMPanther:PTHR22939:SF68~regulator of sigma e protease~HMMPanther:PTHR22939~family not named;gbkey=misc_feature;locus_tag=GGE_0410 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145417 146605 . - . ID=id-AFQR01000007.1:145417..146605;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145417 146449 . - . ID=id-AFQR01000007.1:145417..146449;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145417 145642 . - . ID=id-AFQR01000007.1:145417..145642;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145498 145948 . - . ID=id-AFQR01000007.1:145498..145948;Dbxref=InterPro:IPR001478;Note=ProfileScan:PS50106~pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145525 145972 . - . ID=id-AFQR01000007.1:145525..145972;Dbxref=InterPro:IPR001478,PFAM:PF00595;Note=pdz~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145573 145981 . - . ID=id-AFQR01000007.1:145573..145981;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145573 145693 . - . ID=id-AFQR01000007.1:145573..145693;Note=specific~superfamily%3B label: PDZ superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145594 146431 . - . ID=id-AFQR01000007.1:145594..146431;Note=specific~superfamily%3B label: S2P-M50 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145609 145945 . - . ID=id-AFQR01000007.1:145609..145945;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145621 145633 . - . ID=id-AFQR01000007.1:145621..145633;Note=Gene3D:2.30.42.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 145633 145921 . - . ID=id-AFQR01000007.1:145633..145921;Dbxref=InterPro:IPR001478;Note=superfamily:SSF50156~pdz domain-like~pdz/dhr/glgf;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 146699 149077 . + . ID=gene-GGE_0411;Name=GGE_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0411 GCA_000222085.2|AFQR01000007.1 Genbank CDS 146699 149077 . + 0 ID=cds-EGT83048.1;Parent=gene-GGE_0411;Dbxref=GeneID:12229779,InterPro:IPR000184,InterPro:IPR010827,InterPro:IPR016474,PFAM:PF01103,PFAM:PF07244,PIR:PIRSF006076,TIGRFAM:TIGR03303,NCBI_GP:EGT83048.1;Name=EGT83048.1;Note=Protective surface antigen D15;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_0411;product=Protective surface antigen D15;protein_id=EGT83048.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146699 149075 . + . ID=id-GGE_0411;Note=multi-dom~HMMPanther:PTHR12815:SF6~subfamily not named~HMMPanther:PTHR12815~family not named%3B label: PRK11067;gbkey=misc_feature;locus_tag=GGE_0411 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146732 146741 . + . ID=id-GGE_0411-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0411 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146765 149012 . + . ID=id-GGE_0411-3;Dbxref=InterPro:IPR016474,PIR:PIRSF006076,TIGRFAM:TIGR03303;Note=outer membrane assembly protein%2C omp85 type~outer membrane assembly protein%2C yaet~om_yaet: outer membrane protein assembly com~outer membrane assembly protein%2C yaet;gbkey=misc_feature;locus_tag=GGE_0411 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146735 147917 . - . ID=id-AFQR01000007.1:146735..147917;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146735 147533 . - . ID=id-AFQR01000007.1:146735..147533;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146882 147734 . - . ID=id-AFQR01000007.1:146882..147734;Note=superfamily%3B label: Surf_Ag_VNR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146921 147734 . - . ID=id-AFQR01000007.1:146921..147734;Dbxref=InterPro:IPR010827,PFAM:PF07244;Note=surf_ag_vnr~surface antigen variable number;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146927 147497 . - . ID=id-AFQR01000007.1:146927..147497;Dbxref=InterPro:IPR010827,PFAM:PF07244;Note=surf_ag_vnr~surface antigen variable number;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146936 146972 . - . ID=id-AFQR01000007.1:146936..146972;Dbxref=InterPro:IPR010827,PFAM:PF07244;Note=superfamily~surf_ag_vnr~surface antigen variable number%3B label: Surf_Ag_VNR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146939 147485 . - . ID=id-AFQR01000007.1:146939..147485;Note=superfamily%3B label: Surf_Ag_VNR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146954 147224 . - . ID=id-AFQR01000007.1:146954..147224;Dbxref=InterPro:IPR010827,PFAM:PF07244;Note=surf_ag_vnr~surface antigen variable number;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 146960 147218 . - . ID=id-AFQR01000007.1:146960..147218;Note=superfamily%3B label: Surf_Ag_VNR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 147743 148034 . - . ID=id-AFQR01000007.1:147743..148034;Dbxref=InterPro:IPR000184,PFAM:PF01103;Note=superfamily~bac_surface_ag~bacterial surface antigen (d15)%3B label: Bac_surface_Ag superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 149190 149798 . + . ID=gene-GGE_0412;Name=GGE_0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0412 GCA_000222085.2|AFQR01000007.1 Genbank CDS 149190 149798 . + 0 ID=cds-EGT83049.1;Parent=gene-GGE_0412;Dbxref=GeneID:2495680,InterPro:IPR005632,PFAM:PF03938,NCBI_GP:EGT83049.1;Name=EGT83049.1;Note=omp26;Ontology_term=GO:0051082;gbkey=CDS;go_function=unfolded protein binding|0051082||;locus_tag=GGE_0412;product=Outer membrane protein 26;protein_id=EGT83049.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149190 149760 . + . ID=id-GGE_0412;Note=multi-dom%3B label: HlpA;gbkey=misc_feature;locus_tag=GGE_0412 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149217 149727 . + . ID=id-GGE_0412-2;Note=superfamily%3B label: OmpH superfamily;gbkey=misc_feature;locus_tag=GGE_0412 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149220 149724 . + . ID=id-GGE_0412-3;Dbxref=InterPro:IPR005632,PFAM:PF03938;Note=omph~outer membrane chaperone skp (omph);gbkey=misc_feature;locus_tag=GGE_0412 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149256 149691 . + . ID=id-GGE_0412-4;Dbxref=InterPro:IPR005632;Note=superfamily:SSF111384~omph-like~outer membrane chaperone skp (omph);gbkey=misc_feature;locus_tag=GGE_0412 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149226 149763 . - . ID=id-AFQR01000007.1:149226..149763;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149250 149400 . - . ID=id-AFQR01000007.1:149250..149400;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149256 149415 . - . ID=id-AFQR01000007.1:149256..149415;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149268 149535 . - . ID=id-AFQR01000007.1:149268..149535;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149358 149586 . - . ID=id-AFQR01000007.1:149358..149586;Note=Gene3D:3.30.910.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 149811 150836 . + . ID=gene-GGE_0413;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank CDS 149811 150836 . + 0 ID=cds-EGT83050.1;Parent=gene-GGE_0413;Dbxref=GeneID:81336072,InterPro:IPR001451,InterPro:IPR007691,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR020573,PFAM:PF00132,PFAM:PF04613,TIGRFAM:TIGR01853,NCBI_GP:EGT83050.1;Name=EGT83050.1;Ontology_term=GO:0009245,GO:0016747,GO:0016740;gbkey=CDS;gene=lpxD;go_function=transferase activity transferring acyl groups other than amino-acyl groups|0016747||,transferase activity|0016740||;go_process=lipid A biosynthetic process|0009245||;locus_tag=GGE_0413;product=UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase;protein_id=EGT83050.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149820 150828 . + . ID=id-GGE_0413;Note=multi-dom%3B label: lpxD;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149838 150786 . + . ID=id-GGE_0413-2;Dbxref=InterPro:IPR007691,TIGRFAM:TIGR01853;Note=lipid_a_lpxd: udp-3-o-[3-hydroxymyristoy~udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149841 150771 . + . ID=id-GGE_0413-3;Dbxref=InterPro:IPR007691;Note=HAMAP:MF_00523~lpxd~udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149877 150027 . + . ID=id-GGE_0413-4;Note=superfamily%3B label: LpxD superfamily;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149880 150021 . + . ID=id-GGE_0413-5;Dbxref=InterPro:IPR020573,PFAM:PF04613;Note=lpxd~udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase%2C non-repeat region;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149907 150684 . + . ID=id-GGE_0413-6;Dbxref=InterPro:IPR011004;Note=superfamily:SSF51161~trimeric lpxa-like enzyme~trimeric lpxa-like;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149988 150627 . + . ID=id-GGE_0413-7;Note=HMMPanther:PTHR22572:SF46~udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase~HMMPanther:PTHR22572~family not named;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 150123 150132 . + . ID=id-GGE_0413-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 150147 150429 . + . ID=id-GGE_0413-9;Note=specific~superfamily%3B label: LbetaH superfamily;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 150240 150318 . + . ID=id-GGE_0413-10;Note=Gene3D:2.160.10.10;gbkey=misc_feature;gene=lpxD;locus_tag=GGE_0413 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149862 150309 . - . ID=id-AFQR01000007.1:149862..150309;Dbxref=InterPro:IPR001451,PFAM:PF00132;Note=hexapep~bacterial transferase hexapeptide repeat;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149898 150495 . - . ID=id-AFQR01000007.1:149898..150495;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149898 150210 . - . ID=id-AFQR01000007.1:149898..150210;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149898 150120 . - . ID=id-AFQR01000007.1:149898..150120;Dbxref=InterPro:IPR018357;Note=PatternScan:PS00101~hexapep_transferases~hexapeptide transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 149934 150117 . - . ID=id-AFQR01000007.1:149934..150117;Note=Gene3D:2.160.10.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 151016 151867 . - . ID=gene-GGE_0414;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank CDS 151016 151867 . - 0 ID=cds-EGT83051.1;Parent=gene-GGE_0414;Dbxref=GeneID:81336073,InterPro:IPR000449,InterPro:IPR001816,InterPro:IPR009060,InterPro:IPR014039,InterPro:IPR018101,PFAM:PF00627,PFAM:PF00889,TIGRFAM:TIGR00116,NCBI_GP:EGT83051.1;Name=EGT83051.1;Ontology_term=GO:0006414,GO:0005622,GO:0005515,GO:0003746;gbkey=CDS;gene=tsf;go_component=intracellular|0005622||;go_function=protein binding|0005515||,translation elongation factor activity|0003746||;go_process=translational elongation|0006414||;locus_tag=GGE_0414;product=Elongation factor Ts;protein_id=EGT83051.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151016 151859 . - . ID=id-GGE_0414;Dbxref=InterPro:IPR001816,TIGRFAM:TIGR00116;Note=tsf: translation elongation factor ts~translation elongation factor efts/ef1b;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151016 151856 . - . ID=id-GGE_0414-2;Dbxref=InterPro:IPR001816;Note=multi-dom~HMMPanther:PTHR11741~family not named~translation elongation factor efts/ef1b%3B label: tsf;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151016 151853 . - . ID=id-GGE_0414-3;Dbxref=InterPro:IPR001816;Note=HAMAP:MF_00050~ef_ts~translation elongation factor efts/ef1b;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151022 151178 . - . ID=id-GGE_0414-4;Dbxref=InterPro:IPR009060;Note=Gene3D:1.10.8.10~superfamily:SSF46934~uba-like~uba-like;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151028 151124 . - . ID=id-GGE_0414-5;Dbxref=InterPro:IPR000449,PFAM:PF00627;Note=superfamily~uba~ubiquitin-associated/translation elongation factor ef1b%3B label: UBA superfamily;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151052 151064 . - . ID=id-GGE_0414-6;Dbxref=InterPro:IPR018101;Note=PatternScan:PS01126~ef_ts_1~translation elongation factor ts%2C conserved site;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151187 151634 . - . ID=id-GGE_0414-7;Dbxref=InterPro:IPR014039,PFAM:PF00889;Note=ef_ts~translation elongation factor efts/ef1b%2C dimerization~superfamily:SSF54713~elongation factor ts (ef-ts)%2C dimerization domain~translation elongation factor efts/ef1b%2C dimerization;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151193 151628 . - . ID=id-GGE_0414-8;Note=superfamily%3B label: UBA superfamily;gbkey=misc_feature;gene=tsf;locus_tag=GGE_0414 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151049 151241 . + . ID=id-AFQR01000007.1:151049..151241;Dbxref=InterPro:IPR018101;Note=PatternScan:PS01127~ef_ts_2~translation elongation factor ts%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151052 151157 . + . ID=id-AFQR01000007.1:151052..151157;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151133 151697 . + . ID=id-AFQR01000007.1:151133..151697;Dbxref=InterPro:IPR014039;Note=Gene3D:3.30.479.20~translation elongation factor efts/ef1b%2C dimerization;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151151 151562 . + . ID=id-AFQR01000007.1:151151..151562;Note=Gene3D:1.10.286.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 151903 151912 . - . ID=id-AFQR01000007.1:151903..151912;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 152001 152723 . - . ID=gene-GGE_0415;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank CDS 152001 152723 . - 0 ID=cds-EGT83052.1;Parent=gene-GGE_0415;Dbxref=GeneID:12230940,InterPro:IPR001865,InterPro:IPR005706,InterPro:IPR018130,InterPro:IPR023591,PFAM:PF00318,TIGRFAM:TIGR01011,NCBI_GP:EGT83052.1;Name=EGT83052.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0015935,GO:0003735;gbkey=CDS;gene=rpsB;go_component=intracellular|0005622||,ribosome|0005840||,small ribosomal subunit|0015935||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0415;product=30S ribosomal protein S2;protein_id=EGT83052.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152001 152703 . - . ID=id-GGE_0415;Dbxref=InterPro:IPR005706;Note=HMMPanther:PTHR12534~family not named~ribosomal protein s2%2C bacteria/mitochondria/plastid;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152010 152676 . - . ID=id-GGE_0415-2;Dbxref=InterPro:IPR005706,TIGRFAM:TIGR01011;Note=rpsb_bact: ribosomal protein s2~ribosomal protein s2%2C bacteria/mitochondria/plastid;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152019 152688 . - . ID=id-GGE_0415-3;Dbxref=InterPro:IPR023591;Note=superfamily:SSF52313~ribosomal protein s2~ribosomal protein s2%2C flavodoxin-like domain;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152019 152058 . - . ID=id-GGE_0415-4;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152019 152037 . - . ID=id-GGE_0415-5;Dbxref=InterPro:IPR018130;Note=PatternScan:PS00962~ribosomal_s2_1~ribosomal protein s2%2C conserved site;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152028 152652 . - . ID=id-GGE_0415-6;Dbxref=InterPro:IPR001865,PFAM:PF00318;Note=ribosomal_s2~ribosomal protein s2;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152028 152646 . - . ID=id-GGE_0415-7;Note=specific~superfamily%3B label: RPS2;gbkey=misc_feature;gene=rpsB;locus_tag=GGE_0415 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152016 152649 . + . ID=id-AFQR01000007.1:152016..152649;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152031 152112 . + . ID=id-AFQR01000007.1:152031..152112;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152037 152526 . + . ID=id-AFQR01000007.1:152037..152526;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152046 152589 . + . ID=id-AFQR01000007.1:152046..152589;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152055 152475 . + . ID=id-AFQR01000007.1:152055..152475;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152055 152262 . + . ID=id-AFQR01000007.1:152055..152262;Dbxref=InterPro:IPR001865;Note=FPrintScan:PR00395~ribosomals2~ribosomal protein s2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152076 152475 . + . ID=id-AFQR01000007.1:152076..152475;Dbxref=InterPro:IPR018130;Note=PatternScan:PS00963~ribosomal_s2_2~ribosomal protein s2%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152873 152882 . + . ID=id-AFQR01000007.1:152873..152882;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 152890 153315 . - . ID=gene-GGE_0416;Name=GGE_0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank CDS 152890 153315 . - 0 ID=cds-EGT83053.1;Parent=gene-GGE_0416;Dbxref=GeneID:323526310,InterPro:IPR018717,PFAM:PF10000,NCBI_GP:EGT83053.1;Name=EGT83053.1;Note=YP_004228463;gbkey=CDS;locus_tag=GGE_0416;product=putative aCT-like protein;protein_id=EGT83053.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152890 153247 . - . ID=id-GGE_0416;Note=superfamily%3B label: DUF2241 superfamily;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152890 153064 . - . ID=id-GGE_0416-2;Dbxref=InterPro:IPR018717,PFAM:PF10000;Note=duf2241~domain of unknown function duf2241;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152890 153049 . - . ID=id-GGE_0416-3;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152899 153085 . - . ID=id-GGE_0416-4;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152902 153097 . - . ID=id-GGE_0416-5;Dbxref=InterPro:IPR018717,PFAM:PF10000;Note=duf2241~domain of unknown function duf2241;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 152905 153277 . - . ID=id-GGE_0416-6;Note=superfamily%3B label: DUF2241 superfamily;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153052 153082 . - . ID=id-GGE_0416-7;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;locus_tag=GGE_0416 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153082 153094 . + . ID=id-AFQR01000007.1:153082..153094;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 153325 154083 . - . ID=gene-GGE_0417;Name=GGE_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank CDS 153325 154083 . - 0 ID=cds-EGT83054.1;Parent=gene-GGE_0417;Dbxref=InterPro:IPR013216,PFAM:PF08241,NCBI_GP:EGT83054.1;Name=EGT83054.1;Note=HI_0912;Ontology_term=GO:0008152,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||;go_process=metabolic process|0008152||;locus_tag=GGE_0417;product=putative methyltransferase type 11;protein_id=EGT83054.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153325 154081 . - . ID=id-GGE_0417;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153346 154063 . - . ID=id-GGE_0417-2;Note=HMMPanther:PTHR10108:SF377~putative uncharacterized protein~HMMPanther:PTHR10108~family not named;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153430 153946 . - . ID=id-GGE_0417-3;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153472 153628 . - . ID=id-GGE_0417-4;Dbxref=InterPro:IPR013216,PFAM:PF08241;Note=methyltransf_11~methyltransferase type 11;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153502 153610 . - . ID=id-GGE_0417-5;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153508 153901 . - . ID=id-GGE_0417-6;Note=multi-dom%3B label: SmtA;gbkey=misc_feature;locus_tag=GGE_0417 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 153388 153436 . + . ID=id-AFQR01000007.1:153388..153436;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 154758 155081 . - . ID=gene-GGE_0418;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=GGE_0418 GCA_000222085.2|AFQR01000007.1 Genbank CDS 154758 155081 . - 0 ID=cds-EGT83055.1;Parent=gene-GGE_0418;Dbxref=GeneID:12644613,InterPro:IPR003489,PFAM:PF02482,TIGRFAM:TIGR00741,NCBI_GP:EGT83055.1;Name=EGT83055.1;Ontology_term=GO:0044238,GO:0005488;gbkey=CDS;gene=raiA;go_function=binding|0005488||;go_process=primary metabolic process|0044238||;locus_tag=GGE_0418;product=Ribosome-associated inhibitor A;protein_id=EGT83055.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 154758 155079 . - . ID=id-GGE_0418;Dbxref=InterPro:IPR003489;Note=superfamily:SSF69754~ribosome binding protein y (yfiaue)~ribosomal protein s30ae/sigma 54 modulation protein;gbkey=misc_feature;gene=raiA;locus_tag=GGE_0418 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 154758 155055 . - . ID=id-GGE_0418-2;Dbxref=InterPro:IPR003489,TIGRFAM:TIGR00741;Note=yfia: ribosomal subunit interface protein~ribosomal protein s30ae/sigma 54 modulation protein;gbkey=misc_feature;gene=raiA;locus_tag=GGE_0418 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 154767 155034 . - . ID=id-GGE_0418-3;Dbxref=InterPro:IPR003489,PFAM:PF02482;Note=ribosomal_s30ae~ribosomal protein s30ae/sigma 54 modulation protein;gbkey=misc_feature;gene=raiA;locus_tag=GGE_0418 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 154767 155025 . - . ID=id-GGE_0418-4;Dbxref=InterPro:IPR003489;Note=specific~superfamily~Gene3D:3.30.160.100~ribosomal protein s30ae/sigma 54 modulation protein%3B label: RaiA;gbkey=misc_feature;gene=raiA;locus_tag=GGE_0418 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 154857 154959 . + . ID=id-AFQR01000007.1:154857..154959;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 155316 156686 . - . ID=gene-GGE_0419;Name=GGE_0419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0419 GCA_000222085.2|AFQR01000007.1 Genbank CDS 155316 156686 . - 0 ID=cds-EGT83056.1;Parent=gene-GGE_0419;Dbxref=GeneID:1175322,InterPro:IPR001463,PFAM:PF01235,TIGRFAM:TIGR00835,NCBI_GP:EGT83056.1;Name=EGT83056.1;Note=HI_0883;Ontology_term=GO:0006814,GO:0016020,GO:0005283;gbkey=CDS;go_component=membrane|0016020||;go_function=sodium:amino acid symporter activity|0005283||;go_process=sodium ion transport|0006814||;locus_tag=GGE_0419;product=putative sodium:alanine symporter;protein_id=EGT83056.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155361 156594 . - . ID=id-GGE_0419;Dbxref=InterPro:IPR001463,TIGRFAM:TIGR00835;Note=agcs: amino acid carrier protein~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0419 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155361 155385 . - . ID=id-GGE_0419-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0419 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155442 156555 . - . ID=id-GGE_0419-3;Note=superfamily%3B label: Na_Ala_symp superfamily;gbkey=misc_feature;locus_tag=GGE_0419 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155460 156528 . - . ID=id-GGE_0419-4;Dbxref=InterPro:IPR001463,PFAM:PF01235;Note=na_ala_symp~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0419 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155331 156168 . + . ID=id-AFQR01000007.1:155331..156168;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155343 155469 . + . ID=id-AFQR01000007.1:155343..155469;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155364 155583 . + . ID=id-AFQR01000007.1:155364..155583;Dbxref=InterPro:IPR001463;Note=PatternScan:PS00873~na_alanine_symp~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155367 155373 . + . ID=id-AFQR01000007.1:155367..155373;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155373 156228 . + . ID=id-AFQR01000007.1:155373..156228;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155373 155859 . + . ID=id-AFQR01000007.1:155373..155859;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155376 155943 . + . ID=id-AFQR01000007.1:155376..155943;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155379 156543 . + . ID=id-AFQR01000007.1:155379..156543;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155382 155853 . + . ID=id-AFQR01000007.1:155382..155853;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156537 . + . ID=id-AFQR01000007.1:155385..156537;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156441 . + . ID=id-AFQR01000007.1:155385..156441;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156366 . + . ID=id-AFQR01000007.1:155385..156366;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156336 . + . ID=id-AFQR01000007.1:155385..156336;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156225 . + . ID=id-AFQR01000007.1:155385..156225;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 156027 . + . ID=id-AFQR01000007.1:155385..156027;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155931 . + . ID=id-AFQR01000007.1:155385..155931;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155844 . + . ID=id-AFQR01000007.1:155385..155844;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155733 . + . ID=id-AFQR01000007.1:155385..155733;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155598 . + . ID=id-AFQR01000007.1:155385..155598;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155583 . + . ID=id-AFQR01000007.1:155385..155583;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 155385 155502 . + . ID=id-AFQR01000007.1:155385..155502;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 156751 156760 . + . ID=id-AFQR01000007.1:156751..156760;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 157107 157817 . - . ID=gene-GGE_0420;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank CDS 157107 157817 . - 0 ID=cds-EGT83057.1;Parent=gene-GGE_0420;Dbxref=GeneID:1168484,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,PFAM:PF00072,PFAM:PF00486,NCBI_GP:EGT83057.1;Name=EGT83057.1;Ontology_term=GO:0006355,GO:0000160,GO:0005622,GO:0003677,GO:0000156;gbkey=CDS;gene=arcA;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,two-component response regulator activity|0000156||;go_process=regulation of transcription DNA-dependent|0006355||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_0420;product=Aerobic respiration control protein ArcA;protein_id=EGT83057.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157107 157815 . - . ID=id-GGE_0420;Note=multi-dom%3B label: PRK11173;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157107 157812 . - . ID=id-GGE_0420-2;Note=HMMPanther:PTHR26402:SF21~subfamily not named~HMMPanther:PTHR26402~family not named;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157107 157545 . - . ID=id-GGE_0420-3;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157116 157488 . - . ID=id-GGE_0420-4;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157122 157449 . - . ID=id-GGE_0420-5;Dbxref=InterPro:IPR001789;Note=ProfileScan:PS50110~response_regulatory~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157125 157428 . - . ID=id-GGE_0420-6;Dbxref=InterPro:IPR001789,PFAM:PF00072;Note=response_reg~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157128 157443 . - . ID=id-GGE_0420-7;Note=specific~superfamily%3B label: REC;gbkey=misc_feature;gene=arcA;locus_tag=GGE_0420 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157152 157296 . + . ID=id-AFQR01000007.1:157152..157296;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157338 157572 . + . ID=id-AFQR01000007.1:157338..157572;Dbxref=InterPro:IPR001867,PFAM:PF00486;Note=trans_reg_c~signal transduction response regulator;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157395 157515 . + . ID=id-AFQR01000007.1:157395..157515;Note=specific~superfamily%3B label: trans_reg_C;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157410 157506 . + . ID=id-AFQR01000007.1:157410..157506;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157431 157488 . + . ID=id-AFQR01000007.1:157431..157488;Dbxref=InterPro:IPR016032;Note=superfamily:SSF46894~c-terminal effector domain of the bipartite response regulators~signal transduction response regulator effector;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 157893 157902 . + . ID=id-AFQR01000007.1:157893..157902;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 158008 159771 . + . ID=gene-GGE_0421;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank CDS 158008 159771 . + 0 ID=cds-EGT83058.1;Parent=gene-GGE_0421;Dbxref=InterPro:IPR003834,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,InterPro:IPR022910,PFAM:PF00085,PFAM:PF02683,PFAM:PF11412,NCBI_GP:EGT83058.1;Name=EGT83058.1;Ontology_term=GO:0045454,GO:0017004,GO:0006662,GO:0055114,GO:0016020,GO:0009055,GO:0015035,GO:0047134;gbkey=CDS;gene=dsbD;go_component=membrane|0016020||;go_function=electron carrier activity|0009055||,protein disulfide oxidoreductase activity|0015035||,protein-disulfide reductase activity|0047134||;go_process=cell redox homeostasis|0045454||,cytochrome complex assembly|0017004||,glycerol ether metabolic process|0006662||,oxidation-reduction process|0055114||;locus_tag=GGE_0421;product=Thiol:disulfide interchange protein DsbD;protein_id=EGT83058.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158008 159769 . + . ID=id-GGE_0421;Dbxref=InterPro:IPR022910;Note=HAMAP:MF_00399~dbsd~thiol disulfide interchange protein dsbd;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158020 158056 . + . ID=id-GGE_0421-2;Note=seg;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158023 158062 . + . ID=id-GGE_0421-3;Note=transmembrane_regions;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158068 159712 . + . ID=id-GGE_0421-4;Note=multi-dom%3B label: dipZ;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158071 158404 . + . ID=id-GGE_0421-5;Note=superfamily:SSF74863~thiol:disulfide interchange protein dsbd domain (dsbd-alpha);gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158071 158395 . + . ID=id-GGE_0421-6;Note=Gene3D:2.60.40.1250;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 158383 . + . ID=id-GGE_0421-7;Dbxref=PFAM:PF11412;Note=dsbc;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158083 158380 . + . ID=id-GGE_0421-8;Note=superfamily%3B label: DsbC superfamily;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158575 158623 . + . ID=id-GGE_0421-9;Dbxref=InterPro:IPR003834,PFAM:PF02683;Note=dsbd~cytochrome c assembly protein%2C transmembrane domain;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158602 158605 . + . ID=id-GGE_0421-10;Note=superfamily%3B label: DsbD superfamily;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159385 159394 . + . ID=id-GGE_0421-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dsbD;locus_tag=GGE_0421 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158029 159370 . - . ID=id-AFQR01000007.1:158029..159370;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158038 158569 . - . ID=id-AFQR01000007.1:158038..158569;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158056 159031 . - . ID=id-AFQR01000007.1:158056..159031;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158062 159160 . - . ID=id-AFQR01000007.1:158062..159160;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158062 158320 . - . ID=id-AFQR01000007.1:158062..158320;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158065 159493 . - . ID=id-AFQR01000007.1:158065..159493;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 159241 . - . ID=id-AFQR01000007.1:158077..159241;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 159031 . - . ID=id-AFQR01000007.1:158077..159031;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 158920 . - . ID=id-AFQR01000007.1:158077..158920;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 158794 . - . ID=id-AFQR01000007.1:158077..158794;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 158698 . - . ID=id-AFQR01000007.1:158077..158698;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158077 158569 . - . ID=id-AFQR01000007.1:158077..158569;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158296 159478 . - . ID=id-AFQR01000007.1:158296..159478;Dbxref=InterPro:IPR013766,PFAM:PF00085;Note=thioredoxin~thioredoxin domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158323 159448 . - . ID=id-AFQR01000007.1:158323..159448;Note=specific~superfamily%3B label: DsbDgamma;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158338 159439 . - . ID=id-AFQR01000007.1:158338..159439;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158377 159397 . - . ID=id-AFQR01000007.1:158377..159397;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158386 159394 . - . ID=id-AFQR01000007.1:158386..159394;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158502 158511 . - . ID=id-AFQR01000007.1:158502..158511;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 158641 159130 . - . ID=id-AFQR01000007.1:158641..159130;Dbxref=InterPro:IPR005746;Note=HMMPanther:PTHR10438:SF20~subfamily not named~HMMPanther:PTHR10438~family not named~thioredoxin;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159454 159463 . - . ID=id-AFQR01000007.1:159454..159463;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 159883 160287 . + . ID=gene-GGE_0422;Name=GGE_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0422 GCA_000222085.2|AFQR01000007.1 Genbank CDS 159883 160287 . + 0 ID=cds-EGT83059.1;Parent=gene-GGE_0422;Dbxref=InterPro:IPR011637,PFAM:PF07681,NCBI_GP:EGT83059.1;Name=EGT83059.1;Note=HI_0886;gbkey=CDS;locus_tag=GGE_0422;product=putative Hypothetical protein family YphA;protein_id=EGT83059.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159904 160267 . + . ID=id-GGE_0422;Note=superfamily%3B label: DoxX superfamily;gbkey=misc_feature;locus_tag=GGE_0422 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159919 160117 . + . ID=id-GGE_0422-2;Dbxref=InterPro:IPR011637,PFAM:PF07681;Note=doxx~uncharacterised protein family ypha;gbkey=misc_feature;locus_tag=GGE_0422 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159919 159937 . + . ID=id-GGE_0422-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0422 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159922 160207 . - . ID=id-AFQR01000007.1:159922..160207;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159937 160105 . - . ID=id-AFQR01000007.1:159937..160105;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159937 160036 . - . ID=id-AFQR01000007.1:159937..160036;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159946 160030 . - . ID=id-AFQR01000007.1:159946..160030;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 159949 160201 . - . ID=id-AFQR01000007.1:159949..160201;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160359 160368 . - . ID=id-AFQR01000007.1:160359..160368;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 160470 162068 . + . ID=gene-GGE_0423;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank CDS 160470 162068 . + 0 ID=cds-EGT83060.1;Parent=gene-GGE_0423;Dbxref=GeneID:1172763,InterPro:IPR002695,InterPro:IPR011607,InterPro:IPR013982,InterPro:IPR016193,PFAM:PF01808,PFAM:PF02142,PIR:PIRSF000414,TIGRFAM:TIGR00355,NCBI_GP:EGT83060.1;Name=EGT83060.1;Ontology_term=GO:0006188,GO:0006164,GO:0003937,GO:0003824,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||,catalytic activity|0003824||,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||;go_process=IMP biosynthetic process|0006188||,purine nucleotide biosynthetic process|0006164||;locus_tag=GGE_0423;product=putative purine biosynthesis protein;protein_id=EGT83060.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160470 162066 . + . ID=id-GGE_0423;Dbxref=InterPro:IPR002695,PIR:PIRSF000414;Note=bifunctional purine biosynthesis protein%2C purh type~aicarft/impchase bienzyme;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160485 162054 . + . ID=id-GGE_0423-2;Dbxref=InterPro:IPR002695;Note=multi-dom~HMMPanther:PTHR11692~family not named~aicarft/impchase bienzyme~HAMAP:MF_00139~purh~aicarft/impchase bienzyme%3B label: purH;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160485 161055 . + . ID=id-GGE_0423-3;Dbxref=InterPro:IPR011607;Note=superfamily:SSF52335~methylglyoxal synthase-like~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160485 161025 . + . ID=id-GGE_0423-4;Dbxref=InterPro:IPR011607;Note=Gene3D:3.40.50.1380~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160491 162048 . + . ID=id-GGE_0423-5;Dbxref=InterPro:IPR002695,TIGRFAM:TIGR00355;Note=purh: phosphoribosylaminoimidazolecarboxamid~aicarft/impchase bienzyme;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160491 161031 . + . ID=id-GGE_0423-6;Note=specific~superfamily%3B label: IMPCH;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160524 160812 . + . ID=id-GGE_0423-7;Dbxref=InterPro:IPR011607,PFAM:PF02142;Note=mgs~methylglyoxal synthase-like domain;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160878 161457 . + . ID=id-GGE_0423-8;Dbxref=InterPro:IPR013982,PFAM:PF01808;Note=superfamily~aicarft_impchas~aicarft/impchase bienzyme%2C transformylase domain%3B label: AICARFT_IMPCHas superfamily;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 161139 161400 . + . ID=id-GGE_0423-9;Dbxref=InterPro:IPR016193;Note=superfamily:SSF53927~cytidine deaminase-like~cytidine deaminase-like;gbkey=misc_feature;gene=purH;locus_tag=GGE_0423 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160812 161727 . - . ID=id-AFQR01000007.1:160812..161727;Note=superfamily%3B label: AICARFT_IMPCHas superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160830 161238 . - . ID=id-AFQR01000007.1:160830..161238;Note=Gene3D:3.40.140.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 160902 161607 . - . ID=id-AFQR01000007.1:160902..161607;Note=Gene3D:3.40.140.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 162223 163512 . + . ID=gene-GGE_0424;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank CDS 162223 163512 . + 0 ID=cds-EGT83061.1;Parent=gene-GGE_0424;Dbxref=GeneID:1172752,InterPro:IPR000115,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,InterPro:IPR020560,InterPro:IPR020561,InterPro:IPR020562,PFAM:PF01071,PFAM:PF02843,PFAM:PF02844,TIGRFAM:TIGR00877,NCBI_GP:EGT83061.1;Name=EGT83061.1;Ontology_term=GO:0009113,GO:0005524,GO:0003824,GO:0016874,GO:0004637;gbkey=CDS;gene=purD;go_function=ATP binding|0005524||,catalytic activity|0003824||,ligase activity|0016874||,phosphoribosylamine-glycine ligase activity|0004637||;go_process=purine base biosynthetic process|0009113||;locus_tag=GGE_0424;product=Phosphoribosylamine--glycine ligase;protein_id=EGT83061.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 163501 . + . ID=id-GGE_0424;Note=HMMPanther:PTHR10520~trifunctional purine biosynthetic protein adenosine-3-related;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 163498 . + . ID=id-GGE_0424-2;Note=multi-dom%3B label: PRK00885;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 163495 . + . ID=id-GGE_0424-3;Dbxref=InterPro:IPR000115,TIGRFAM:TIGR00877;Note=purd: phosphoribosylamine--glycine ligase~phosphoribosylglycinamide synthetase;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 163492 . + . ID=id-GGE_0424-4;Dbxref=InterPro:IPR000115;Note=HAMAP:MF_00138~gars~phosphoribosylglycinamide synthetase;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 162532 . + . ID=id-GGE_0424-5;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162223 162529 . + . ID=id-GGE_0424-6;Dbxref=InterPro:IPR020562,PFAM:PF02844;Note=gars_n~phosphoribosylglycinamide synthetase%2C n-domain;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162229 162526 . + . ID=id-GGE_0424-7;Note=superfamily%3B label: GARS_N superfamily;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162229 162505 . + . ID=id-GGE_0424-8;Dbxref=InterPro:IPR013817;Note=Gene3D:3.40.50.20~pre-atp-grasp fold;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162532 162805 . + . ID=id-GGE_0424-9;Dbxref=InterPro:IPR020561,PFAM:PF01071;Note=superfamily~gars_a~phosphoribosylglycinamide synthetase%2C atp-grasp (a) domain%3B label: CPSase_L_D2 superfamily;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162535 162895 . + . ID=id-GGE_0424-10;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162550 162847 . + . ID=id-GGE_0424-11;Dbxref=InterPro:IPR011761;Note=ProfileScan:PS50975~atp_grasp~atp-grasp fold;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163288 163297 . + . ID=id-GGE_0424-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=purD;locus_tag=GGE_0424 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162433 162586 . - . ID=id-AFQR01000007.1:162433..162586;Dbxref=InterPro:IPR013815;Note=Gene3D:3.30.1490.20~atp-grasp fold%2C subdomain 1;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162502 163216 . - . ID=id-AFQR01000007.1:162502..163216;Dbxref=InterPro:IPR020560;Note=Gene3D:3.90.600.10~phosphoribosylglycinamide synthetase%2C c-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162502 163213 . - . ID=id-AFQR01000007.1:162502..163213;Dbxref=InterPro:IPR020560,PFAM:PF02843;Note=superfamily~gars_c~phosphoribosylglycinamide synthetase%2C c-domain%3B label: GARS_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162517 163207 . - . ID=id-AFQR01000007.1:162517..163207;Dbxref=InterPro:IPR011054;Note=superfamily:SSF51246~rudiment single hybrid motif~rudiment single hybrid motif;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 162637 162796 . - . ID=id-AFQR01000007.1:162637..162796;Dbxref=InterPro:IPR013816;Note=Gene3D:3.30.470.20~atp-grasp fold%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 163636 164901 . + . ID=gene-GGE_0425;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank CDS 163636 164901 . + 0 ID=cds-EGT83062.1;Parent=gene-GGE_0425;Dbxref=GeneID:166233496,InterPro:IPR001085,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR019798,PFAM:PF00464,PIR:PIRSF000412,NCBI_GP:EGT83062.1;Name=EGT83062.1;Ontology_term=GO:0006563,GO:0006544,GO:0003824,GO:0004372,GO:0030170;gbkey=CDS;gene=glyA;go_function=catalytic activity|0003824||,glycine hydroxymethyltransferase activity|0004372||,pyridoxal phosphate binding|0030170||;go_process=L-serine metabolic process|0006563||,glycine metabolic process|0006544||;locus_tag=GGE_0425;product=Serine hydroxymethyltransferase;protein_id=EGT83062.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163636 164896 . + . ID=id-GGE_0425;Dbxref=InterPro:IPR001085,InterPro:IPR015424,PIR:PIRSF000412;Note=serine/glycine hydroxymethyltransferase~serine hydroxymethyltransferase~superfamily:SSF53383~plp-dependent transferases~pyridoxal phosphate-dependent transferase%2C major domain;gbkey=misc_feature;gene=glyA;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163660 164875 . + . ID=id-GGE_0425-2;Dbxref=InterPro:IPR001085;Note=HMMPanther:PTHR11680~family not named~serine hydroxymethyltransferase;gbkey=misc_feature;gene=glyA;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163663 164848 . + . ID=id-GGE_0425-3;Note=specific~superfamily%3B label: AAT_I superfamily;gbkey=misc_feature;gene=glyA;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163663 164770 . + . ID=id-GGE_0425-4;Dbxref=InterPro:IPR001085,PFAM:PF00464;Note=shmt~serine hydroxymethyltransferase;gbkey=misc_feature;gene=glyA;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163747 164380 . + . ID=id-GGE_0425-5;Dbxref=InterPro:IPR015421;Note=Gene3D:3.40.640.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1;gbkey=misc_feature;gene=glyA;locus_tag=GGE_0425 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163666 164299 . - . ID=id-AFQR01000007.1:163666..164299;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 163687 164299 . - . ID=id-AFQR01000007.1:163687..164299;Dbxref=InterPro:IPR019798;Note=PatternScan:PS00096~shmt~serine hydroxymethyltransferase%2C pyridoxal phosphate binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164044 164491 . - . ID=id-AFQR01000007.1:164044..164491;Dbxref=InterPro:IPR015422;Note=Gene3D:3.90.1150.10~pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 164924 165193 . + . ID=gene-GGE_0426;Name=GGE_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0426 GCA_000222085.2|AFQR01000007.1 Genbank CDS 164924 165193 . + 0 ID=cds-EGT83063.1;Parent=gene-GGE_0426;Dbxref=GeneID:301154803,InterPro:IPR010718,PFAM:PF06961,NCBI_GP:EGT83063.1;Name=EGT83063.1;Note=CBW14266;gbkey=CDS;locus_tag=GGE_0426;product=Hypothetical protein;protein_id=EGT83063.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164924 165140 . + . ID=id-GGE_0426;Note=HMMPanther:PTHR12962:SF1~subfamily not named~HMMPanther:PTHR12962~family not named;gbkey=misc_feature;locus_tag=GGE_0426 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164954 165077 . + . ID=id-GGE_0426-2;Note=superfamily%3B label: DUF1294 superfamily;gbkey=misc_feature;locus_tag=GGE_0426 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164957 165074 . + . ID=id-GGE_0426-3;Dbxref=InterPro:IPR010718,PFAM:PF06961;Note=duf1294~protein of unknown function duf1294;gbkey=misc_feature;locus_tag=GGE_0426 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164960 165020 . - . ID=id-AFQR01000007.1:164960..165020;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164993 165110 . - . ID=id-AFQR01000007.1:164993..165110;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 164993 164999 . - . ID=id-AFQR01000007.1:164993..164999;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 165234 165923 . + . ID=gene-GGE_0427;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank CDS 165234 165923 . + 0 ID=cds-EGT83064.1;Parent=gene-GGE_0427;Dbxref=GeneID:109823801,InterPro:IPR001977,PFAM:PF01121,TIGRFAM:TIGR00152,NCBI_GP:EGT83064.1;Name=EGT83064.1;Ontology_term=GO:0015937,GO:0005524,GO:0004140;gbkey=CDS;gene=coaE;go_function=ATP binding|0005524||,dephospho-CoA kinase activity|0004140||;go_process=coenzyme A biosynthetic process|0015937||;locus_tag=GGE_0427;product=Dephospho-CoA kinase;protein_id=EGT83064.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165279 165843 . + . ID=id-GGE_0427;Note=HMMPanther:PTHR10695~dephospho-coa kinase-related;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165300 165846 . + . ID=id-GGE_0427-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165306 165849 . + . ID=id-GGE_0427-3;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: CoaE;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165309 165819 . + . ID=id-GGE_0427-4;Dbxref=InterPro:IPR001977;Note=HAMAP:MF_00376~dephospho_coa_kinase~dephospho-coa kinase;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165312 165768 . + . ID=id-GGE_0427-5;Dbxref=InterPro:IPR001977,PFAM:PF01121;Note=coae~dephospho-coa kinase;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165315 165837 . + . ID=id-GGE_0427-6;Dbxref=InterPro:IPR001977;Note=ProfileScan:PS51219~dpck~dephospho-coa kinase;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165315 165789 . + . ID=id-GGE_0427-7;Dbxref=InterPro:IPR001977,TIGRFAM:TIGR00152;Note=tigr00152: dephospho-coa kinase~dephospho-coa kinase;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165315 165768 . + . ID=id-GGE_0427-8;Note=specific~superfamily%3B label: DPCK;gbkey=misc_feature;gene=coaE;locus_tag=GGE_0427 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165276 165393 . - . ID=id-AFQR01000007.1:165276..165393;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165662 165671 . - . ID=id-AFQR01000007.1:165662..165671;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 165916 166122 . + . ID=gene-GGE_0428;Name=GGE_0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0428 GCA_000222085.2|AFQR01000007.1 Genbank CDS 165916 166122 . + 0 ID=cds-EGT83065.1;Parent=gene-GGE_0428;Dbxref=GeneID:166228856,InterPro:IPR005584,InterPro:IPR013088,PFAM:PF03884,NCBI_GP:EGT83065.1;Name=EGT83065.1;Note=CGSHiEE_07570;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;go_function=sequence-specific DNA binding transcription factor activity|0003700||,zinc ion binding|0008270||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0428;product=UPF0243 zinc-binding protein;protein_id=EGT83065.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165922 166111 . + . ID=id-GGE_0428;Note=superfamily~superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain)%3B label: DUF329 superfamily;gbkey=misc_feature;locus_tag=GGE_0428 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165925 166093 . + . ID=id-GGE_0428-2;Dbxref=InterPro:IPR013088;Note=Gene3D:3.30.50.10~zinc finger%2C nhr/gata-type;gbkey=misc_feature;locus_tag=GGE_0428 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165928 166099 . + . ID=id-GGE_0428-3;Dbxref=InterPro:IPR005584;Note=HAMAP:MF_00649~upf0243~uncharacterised protein family%2C zinc-binding;gbkey=misc_feature;locus_tag=GGE_0428 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 165937 166069 . + . ID=id-GGE_0428-4;Dbxref=InterPro:IPR005584,PFAM:PF03884;Note=duf329~uncharacterised protein family%2C zinc-binding;gbkey=misc_feature;locus_tag=GGE_0428 GCA_000222085.2|AFQR01000007.1 Genbank gene 166230 167486 . + . ID=gene-GGE_0429;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank CDS 166230 167486 . + 0 ID=cds-EGT83066.1;Parent=gene-GGE_0429;Dbxref=GeneID:189040030,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR023554,PFAM:PF00270,PFAM:PF00271,NCBI_GP:EGT83066.1;Name=EGT83066.1;Ontology_term=GO:0005524,GO:0004004,GO:0008026,GO:0004386,GO:0003676;gbkey=CDS;gene=rhlB;go_function=ATP binding|0005524||,ATP-dependent RNA helicase activity|0004004||,ATP-dependent helicase activity|0008026||,helicase activity|0004386||,nucleic acid binding|0003676||;locus_tag=GGE_0429;product=ATP-dependent RNA helicase rhlB;protein_id=EGT83066.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166242 167412 . + . ID=id-GGE_0429;Dbxref=InterPro:IPR023554;Note=HAMAP:MF_00661~helicase_rhlb~rna helicase%2C atp-dependent%2C rhlb type;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166245 167460 . + . ID=id-GGE_0429-2;Note=multi-dom%3B label: PRK04837;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166251 166872 . + . ID=id-GGE_0429-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166266 167430 . + . ID=id-GGE_0429-4;Note=HMMPanther:PTHR24031:SF51~subfamily not named~HMMPanther:PTHR24031~family not named;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166266 166317 . + . ID=id-GGE_0429-5;Dbxref=InterPro:IPR014014;Note=ProfileScan:PS51195~q_motif~rna helicase%2C dead-box type%2C q motif;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166272 166857 . + . ID=id-GGE_0429-6;Note=specific~superfamily%3B label: DEADc;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166338 166752 . + . ID=id-GGE_0429-7;Dbxref=InterPro:IPR011545,PFAM:PF00270;Note=dead~dna/rna helicase%2C dead/deah box type;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166359 166767 . + . ID=id-GGE_0429-8;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166485 167106 . + . ID=id-GGE_0429-9;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rhlB;locus_tag=GGE_0429 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166257 166725 . - . ID=id-AFQR01000007.1:166257..166725;Dbxref=InterPro:IPR000629;Note=PatternScan:PS00039~dead_atp_helicase~rna helicase%2C atp-dependent%2C dead-box%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166461 167061 . - . ID=id-AFQR01000007.1:166461..167061;Dbxref=InterPro:IPR001650,PFAM:PF00271;Note=helicase_c~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166611 166935 . - . ID=id-AFQR01000007.1:166611..166935;Note=specific~superfamily%3B label: DEXDc superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166674 166965 . - . ID=id-AFQR01000007.1:166674..166965;Dbxref=InterPro:IPR001650;Note=ProfileScan:PS51194~helicase_cter~helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 166719 166893 . - . ID=id-AFQR01000007.1:166719..166893;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 167529 168545 . + . ID=gene-GGE_0430;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank CDS 167529 168545 . + 0 ID=cds-EGT83067.1;Parent=gene-GGE_0430;Dbxref=GeneID:1169828,InterPro:IPR001509,InterPro:IPR005886,InterPro:IPR008089,InterPro:IPR016040,PFAM:PF01370,TIGRFAM:TIGR01179,NCBI_GP:EGT83067.1;Name=EGT83067.1;Ontology_term=GO:0005975,GO:0044237,GO:0006012,GO:0008152,GO:0003978,GO:0005488,GO:0003824,GO:0050662,GO:0016857;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,racemase and epimerase activity acting on carbohydrates and derivatives|0016857||;go_process=carbohydrate metabolic process|0005975||,cellular metabolic process|0044237||,galactose metabolic process|0006012||,metabolic process|0008152||;locus_tag=GGE_0430;product=UDP-glucose 4-epimerase;protein_id=EGT83067.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167529 168543 . + . ID=id-GGE_0430;Dbxref=InterPro:IPR005886;Note=HMMPanther:PTHR10366:SF39~udp-glucose 4-epimerase~udp-glucose 4-epimerase~HMMPanther:PTHR10366~family not named~superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167529 168078 . + . ID=id-GGE_0430-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167535 168534 . + . ID=id-GGE_0430-3;Dbxref=InterPro:IPR005886,TIGRFAM:TIGR01179;Note=gale: udp-glucose 4-epimerase~udp-glucose 4-epimerase;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167535 168516 . + . ID=id-GGE_0430-4;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167538 168534 . + . ID=id-GGE_0430-5;Note=multi-dom%3B label: PLN02240;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167538 168309 . + . ID=id-GGE_0430-6;Dbxref=InterPro:IPR001509,PFAM:PF01370;Note=epimerase~nad-dependent epimerase/dehydratase;gbkey=misc_feature;gene=galE;locus_tag=GGE_0430 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167577 168297 . - . ID=id-AFQR01000007.1:167577..168297;Dbxref=InterPro:IPR008089;Note=FPrintScan:PR01713~nucepimerase~nucleotide sugar epimerase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167577 168222 . - . ID=id-AFQR01000007.1:167577..168222;Dbxref=InterPro:IPR008089;Note=FPrintScan:PR01713~nucepimerase~nucleotide sugar epimerase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167583 168414 . - . ID=id-AFQR01000007.1:167583..168414;Dbxref=InterPro:IPR008089;Note=FPrintScan:PR01713~nucepimerase~nucleotide sugar epimerase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 167754 168318 . - . ID=id-AFQR01000007.1:167754..168318;Note=Gene3D:3.90.25.10;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168677 168686 . - . ID=id-AFQR01000007.1:168677..168686;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 168688 169965 . + . ID=gene-GGE_0431;Name=GGE_0431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank CDS 168688 169965 . + 0 ID=cds-EGT83068.1;Parent=gene-GGE_0431;Dbxref=GeneID:1175225,InterPro:IPR004752,InterPro:IPR011701,InterPro:IPR016196,PFAM:PF07690,TIGRFAM:TIGR00901,NCBI_GP:EGT83068.1;Name=EGT83068.1;Note=HI_0350;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=transmembrane transport|0055085||;locus_tag=GGE_0431;product=putative major facilitator superfamily%2C general substrate transporter;protein_id=EGT83068.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168688 169942 . + . ID=id-GGE_0431;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168694 169879 . + . ID=id-GGE_0431-2;Note=HMMPanther:PTHR12778:SF2~acetyl-coa transporter-related~HMMPanther:PTHR12778~family not named;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168724 169249 . + . ID=id-GGE_0431-3;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168727 168748 . + . ID=id-GGE_0431-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168745 169753 . + . ID=id-GGE_0431-5;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168751 169858 . + . ID=id-GGE_0431-6;Note=multi-dom%3B label: ampG;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168763 169735 . + . ID=id-GGE_0431-7;Dbxref=InterPro:IPR004752,TIGRFAM:TIGR00901;Note=superfamily~2a0125: ampg-related permease~ampg-related permease%3B label: MFS superfamily;gbkey=misc_feature;locus_tag=GGE_0431 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168709 169381 . - . ID=id-AFQR01000007.1:168709..169381;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168718 169837 . - . ID=id-AFQR01000007.1:168718..169837;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168748 169213 . - . ID=id-AFQR01000007.1:168748..169213;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168748 168934 . - . ID=id-AFQR01000007.1:168748..168934;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169861 . - . ID=id-AFQR01000007.1:168757..169861;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169780 . - . ID=id-AFQR01000007.1:168757..169780;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169675 . - . ID=id-AFQR01000007.1:168757..169675;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169570 . - . ID=id-AFQR01000007.1:168757..169570;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169483 . - . ID=id-AFQR01000007.1:168757..169483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169372 . - . ID=id-AFQR01000007.1:168757..169372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169135 . - . ID=id-AFQR01000007.1:168757..169135;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 169006 . - . ID=id-AFQR01000007.1:168757..169006;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 168757 168829 . - . ID=id-AFQR01000007.1:168757..168829;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 169221 169230 . - . ID=id-AFQR01000007.1:169221..169230;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 169249 169375 . - . ID=id-AFQR01000007.1:169249..169375;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 169964 169973 . + . ID=id-AFQR01000007.1:169964..169973;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 170050 170694 . + . ID=gene-GGE_0432;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank CDS 170050 170694 . + 0 ID=cds-EGT83069.1;Parent=gene-GGE_0432;Dbxref=GeneID:1170608,InterPro:IPR000850,InterPro:IPR006259,InterPro:IPR007862,PFAM:PF00406,PFAM:PF05191,TIGRFAM:TIGR01351,NCBI_GP:EGT83069.1;Name=EGT83069.1;Ontology_term=GO:0006139,GO:0005524,GO:0004017,GO:0019205,GO:0019201,GO:0016776;gbkey=CDS;gene=adk;go_function=ATP binding|0005524||,adenylate kinase activity|0004017||,nucleobase nucleoside nucleotide kinase activity|0019205||,nucleotide kinase activity|0019201||,phosphotransferase activity phosphate group as acceptor|0016776||;go_process=nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||;locus_tag=GGE_0432;product=Adenylate kinase;protein_id=EGT83069.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170050 170692 . + . ID=id-GGE_0432;Dbxref=InterPro:IPR000850;Note=multi-dom~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase~HAMAP:MF_00235~adenylate_kinase_adk~adenylate kinase%3B label: adk;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170050 170689 . + . ID=id-GGE_0432-2;Dbxref=InterPro:IPR000850;Note=Gene3D:3.40.50.300~HMMPanther:PTHR23359~family not named~adenylate kinase;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170056 170689 . + . ID=id-GGE_0432-3;Dbxref=InterPro:IPR006259,TIGRFAM:TIGR01351;Note=adk: adenylate kinases~adenylate kinase%2C subfamily;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170056 170662 . + . ID=id-GGE_0432-4;Note=specific~superfamily%3B label: ADK;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170062 170092 . + . ID=id-GGE_0432-5;Dbxref=InterPro:IPR000850;Note=FPrintScan:PR00094~adenyltknase~adenylate kinase;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170065 170596 . + . ID=id-GGE_0432-6;Dbxref=InterPro:IPR000850,PFAM:PF00406;Note=adk~adenylate kinase;gbkey=misc_feature;gene=adk;locus_tag=GGE_0432 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170086 170293 . - . ID=id-AFQR01000007.1:170086..170293;Dbxref=InterPro:IPR000850;Note=PatternScan:PS00113~adenylate_kinase~adenylate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170095 170569 . - . ID=id-AFQR01000007.1:170095..170569;Dbxref=InterPro:IPR000850;Note=FPrintScan:PR00094~adenyltknase~adenylate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170095 170146 . - . ID=id-AFQR01000007.1:170095..170146;Dbxref=InterPro:IPR000850;Note=FPrintScan:PR00094~adenyltknase~adenylate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170098 170518 . - . ID=id-AFQR01000007.1:170098..170518;Dbxref=InterPro:IPR000850;Note=FPrintScan:PR00094~adenyltknase~adenylate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170101 170293 . - . ID=id-AFQR01000007.1:170101..170293;Dbxref=InterPro:IPR000850;Note=FPrintScan:PR00094~adenyltknase~adenylate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170158 170419 . - . ID=id-AFQR01000007.1:170158..170419;Dbxref=InterPro:IPR007862,PFAM:PF05191;Note=adk_lid~adenylate kinase%2C active site lid domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170712 170721 . - . ID=id-AFQR01000007.1:170712..170721;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 170761 173841 . - . ID=gene-GGE_0433;Name=GGE_0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank CDS 170761 173841 . - 0 ID=cds-EGT83070.1;Parent=gene-GGE_0433;Dbxref=GeneID:2833482,InterPro:IPR001036,PFAM:PF00873,NCBI_GP:EGT83070.1;Name=EGT83070.1;Note=HI_0895;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0433;product=putative multidrug efflux transporter AcrB transmembrane domain-containing protein;protein_id=EGT83070.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170761 173806 . - . ID=id-GGE_0433;Note=multi-dom%3B label: PRK09579;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170773 173779 . - . ID=id-GGE_0433-2;Dbxref=InterPro:IPR001036,PFAM:PF00873;Note=acr_tran~acriflavin resistance protein;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170779 172447 . - . ID=id-GGE_0433-3;Note=HMMPanther:PTHR10796:SF57~glr4028 protein~HMMPanther:PTHR10796~patched-related;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170782 170830 . - . ID=id-GGE_0433-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170791 170836 . - . ID=id-GGE_0433-5;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170800 170815 . - . ID=id-GGE_0433-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170881 171049 . - . ID=id-GGE_0433-7;Note=superfamily:SSF82693~multidrug efflux transporter acrb pore domain pn1%2C pn2%2C pc1 and pc2 subdomains;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171160 171331 . - . ID=id-GGE_0433-8;Note=superfamily:SSF82693~multidrug efflux transporter acrb pore domain pn1%2C pn2%2C pc1 and pc2 subdomains;gbkey=misc_feature;locus_tag=GGE_0433 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170788 170884 . + . ID=id-AFQR01000007.1:170788..170884;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170797 171922 . + . ID=id-AFQR01000007.1:170797..171922;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170803 173314 . + . ID=id-AFQR01000007.1:170803..173314;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170803 172192 . + . ID=id-AFQR01000007.1:170803..172192;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170806 172567 . + . ID=id-AFQR01000007.1:170806..172567;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170815 172378 . + . ID=id-AFQR01000007.1:170815..172378;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170818 170875 . + . ID=id-AFQR01000007.1:170818..170875;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170821 171766 . + . ID=id-AFQR01000007.1:170821..171766;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170827 171826 . + . ID=id-AFQR01000007.1:170827..171826;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 173713 . + . ID=id-AFQR01000007.1:170830..173713;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 173626 . + . ID=id-AFQR01000007.1:170830..173626;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 173470 . + . ID=id-AFQR01000007.1:170830..173470;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 173389 . + . ID=id-AFQR01000007.1:170830..173389;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 173293 . + . ID=id-AFQR01000007.1:170830..173293;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 172144 . + . ID=id-AFQR01000007.1:170830..172144;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 172048 . + . ID=id-AFQR01000007.1:170830..172048;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 171907 . + . ID=id-AFQR01000007.1:170830..171907;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170830 171829 . + . ID=id-AFQR01000007.1:170830..171829;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170833 172144 . + . ID=id-AFQR01000007.1:170833..172144;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170833 172069 . + . ID=id-AFQR01000007.1:170833..172069;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170833 171745 . + . ID=id-AFQR01000007.1:170833..171745;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170836 171910 . + . ID=id-AFQR01000007.1:170836..171910;Dbxref=InterPro:IPR001036;Note=FPrintScan:PR00702~acriflavinrp~acriflavin resistance protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 170923 171562 . + . ID=id-AFQR01000007.1:170923..171562;Note=Gene3D:3.30.70.1320;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171016 171304 . + . ID=id-AFQR01000007.1:171016..171304;Note=superfamily:SSF82714~multidrug efflux transporter acrb tolc docking domain dn and dc subdomains;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171025 172855 . + . ID=id-AFQR01000007.1:171025..172855;Note=superfamily:SSF82714~multidrug efflux transporter acrb tolc docking domain dn and dc subdomains;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171052 172417 . + . ID=id-AFQR01000007.1:171052..172417;Note=superfamily:SSF82693~multidrug efflux transporter acrb pore domain pn1%2C pn2%2C pc1 and pc2 subdomains;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171367 171625 . + . ID=id-AFQR01000007.1:171367..171625;Note=superfamily:SSF82866~multidrug efflux transporter acrb transmembrane domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 171469 173101 . + . ID=id-AFQR01000007.1:171469..173101;Note=superfamily:SSF82866~multidrug efflux transporter acrb transmembrane domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 173859 175055 . - . ID=gene-GGE_0434;Name=GGE_0434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank CDS 173859 175055 . - 0 ID=cds-EGT83071.1;Parent=gene-GGE_0434;Dbxref=GeneID:2494627,InterPro:IPR006143,PFAM:PF00529,TIGRFAM:TIGR01730,NCBI_GP:EGT83071.1;Name=EGT83071.1;Note=HI_0894;Ontology_term=GO:0009306,GO:0016020,GO:0008565;gbkey=CDS;go_component=membrane|0016020||;go_function=protein transporter activity|0008565||;go_process=protein secretion|0009306||;locus_tag=GGE_0434;product=putative hlyD-like secretion protein;protein_id=EGT83071.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173895 173928 . - . ID=id-GGE_0434;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 174027 174840 . - . ID=id-GGE_0434-2;Dbxref=InterPro:IPR006143,TIGRFAM:TIGR01730;Note=rnd_mfp: efflux transporter%2C rnd family%2C mfp~secretion protein hlyd;gbkey=misc_feature;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 174027 174642 . - . ID=id-GGE_0434-3;Note=multi-dom%3B label: RND_mfp;gbkey=misc_feature;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 174060 174528 . - . ID=id-GGE_0434-4;Note=superfamily:SSF111369~hlyd-like secretion proteins;gbkey=misc_feature;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 174108 174138 . - . ID=id-GGE_0434-5;Dbxref=InterPro:IPR006143,PFAM:PF00529;Note=hlyd~secretion protein hlyd;gbkey=misc_feature;locus_tag=GGE_0434 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173898 174222 . + . ID=id-AFQR01000007.1:173898..174222;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173904 174945 . + . ID=id-AFQR01000007.1:173904..174945;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173925 174222 . + . ID=id-AFQR01000007.1:173925..174222;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173937 174315 . + . ID=id-AFQR01000007.1:173937..174315;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 173991 174366 . + . ID=id-AFQR01000007.1:173991..174366;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 175086 175649 . - . ID=gene-GGE_0435;Name=GGE_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank CDS 175086 175649 . - 0 ID=cds-EGT83072.1;Parent=gene-GGE_0435;Dbxref=GeneID:1175324,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR015893,PFAM:PF00440,NCBI_GP:EGT83072.1;Name=EGT83072.1;Note=HI_0893;Ontology_term=GO:0016481,GO:0006355,GO:0005515,GO:0003700,GO:0016566;gbkey=CDS;go_function=protein binding|0005515||,sequence-specific DNA binding transcription factor activity|0003700||,specific transcriptional repressor activity|0016566||;go_process=negative regulation of transcription|0016481||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0435;product=putative transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal;protein_id=EGT83072.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175086 175647 . - . ID=id-GGE_0435;Note=multi-dom%3B label: AcrR;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175092 175596 . - . ID=id-GGE_0435-2;Dbxref=InterPro:IPR015893;Note=Gene3D:1.10.357.10~tetracycline transcriptional regulator%2C tetr-like;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175098 175323 . - . ID=id-GGE_0435-3;Dbxref=InterPro:IPR009057;Note=superfamily:SSF46689~homeodomain-like~homeodomain-like;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175104 175269 . - . ID=id-GGE_0435-4;Dbxref=InterPro:IPR001647;Note=ProfileScan:PS50977~hth_tetr_2~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175122 175221 . - . ID=id-GGE_0435-5;Dbxref=InterPro:IPR001647,PFAM:PF00440;Note=superfamily~tetr_n~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal%3B label: TetR_N superfamily;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175122 175128 . - . ID=id-GGE_0435-6;Dbxref=InterPro:IPR001647;Note=FPrintScan:PR00455~hthtetr~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175158 175182 . - . ID=id-GGE_0435-7;Dbxref=InterPro:IPR001647;Note=PatternScan:PS01081~hth_tetr_1~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature;locus_tag=GGE_0435 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175158 175185 . + . ID=id-AFQR01000007.1:175158..175185;Dbxref=InterPro:IPR001647;Note=FPrintScan:PR00455~hthtetr~transcription regulator%2C tetr-like%2C dna-binding%2C bacterial/archaeal;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175815 175824 . - . ID=id-AFQR01000007.1:175815..175824;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 175846 176736 . - . ID=gene-GGE_0436;Name=GGE_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0436 GCA_000222085.2|AFQR01000007.1 Genbank CDS 175846 176736 . - 0 ID=cds-EGT83073.1;Parent=gene-GGE_0436;Dbxref=GeneID:1175312,NCBI_GP:EGT83073.1;Name=EGT83073.1;Note=HI_0842;gbkey=CDS;locus_tag=GGE_0436;product=putative metallo-dependent hydrolase;protein_id=EGT83073.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175852 176722 . - . ID=id-GGE_0436;Note=superfamily:SSF51556~metallo-dependent hydrolase;gbkey=misc_feature;locus_tag=GGE_0436 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175876 176701 . - . ID=id-GGE_0436-2;Note=Gene3D:3.20.20.140;gbkey=misc_feature;locus_tag=GGE_0436 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175915 176662 . - . ID=id-GGE_0436-3;Note=superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_0436 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 175975 176602 . + . ID=id-AFQR01000007.1:175975..176602;Note=BlastProDom:PD049525~y843_haein_p44059;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 176773 176836 . - . ID=id-AFQR01000007.1:176773..176836;Note=superfamily%3B label: metallo-dependent_hydrolase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 177036 178793 . - . ID=gene-GGE_0437;Name=GGE_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank CDS 177036 178793 . - 0 ID=cds-EGT83074.1;Parent=gene-GGE_0437;Dbxref=GeneID:1175860,InterPro:IPR000917,InterPro:IPR012159,InterPro:IPR017849,InterPro:IPR017850,PFAM:PF00884,PFAM:PF11893,PIR:PIRSF004950,NCBI_GP:EGT83074.1;Name=EGT83074.1;Note=HI_0841;Ontology_term=GO:0008152,GO:0003824,GO:0008484;gbkey=CDS;go_function=catalytic activity|0003824||,sulfuric ester hydrolase activity|0008484||;go_process=metabolic process|0008152||;locus_tag=GGE_0437;product=putative alkaline-phosphatase-like%2C core domain-containing protein;protein_id=EGT83074.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177036 178791 . - . ID=id-GGE_0437;Dbxref=InterPro:IPR012159,PIR:PIRSF004950;Note=multi-dom~predicted membrane sulfatase%2C hi0842 type~membrane sulfatase%2C hi0842-related%3B label: COG3083;gbkey=misc_feature;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177060 177789 . - . ID=id-GGE_0437-2;Note=superfamily%3B label: DUF3413 superfamily;gbkey=misc_feature;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177066 177783 . - . ID=id-GGE_0437-3;Dbxref=PFAM:PF11893;Note=duf3413;gbkey=misc_feature;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177642 177651 . - . ID=id-GGE_0437-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177825 177942 . - . ID=id-GGE_0437-5;Dbxref=InterPro:IPR017850;Note=superfamily:SSF53649~alkaline phosphatase-like~alkaline-phosphatase-like%2C core domain;gbkey=misc_feature;locus_tag=GGE_0437 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177090 177459 . + . ID=id-AFQR01000007.1:177090..177459;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177105 177573 . + . ID=id-AFQR01000007.1:177105..177573;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177105 177312 . + . ID=id-AFQR01000007.1:177105..177312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177105 177207 . + . ID=id-AFQR01000007.1:177105..177207;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177105 177111 . + . ID=id-AFQR01000007.1:177105..177111;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177372 178275 . + . ID=id-AFQR01000007.1:177372..178275;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177456 177831 . + . ID=id-AFQR01000007.1:177456..177831;Dbxref=InterPro:IPR000917,PFAM:PF00884;Note=sulfatase~sulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177534 177543 . + . ID=id-AFQR01000007.1:177534..177543;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177804 177831 . + . ID=id-AFQR01000007.1:177804..177831;Dbxref=InterPro:IPR017849;Note=Gene3D:3.40.720.10~alkaline phosphatase-like%2C alpha/beta/alpha;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177807 177828 . + . ID=id-AFQR01000007.1:177807..177828;Note=HMMPanther:PTHR10342:SF77~sulfatase yidj-related~HMMPanther:PTHR10342~arylsulfatase;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 177813 177831 . + . ID=id-AFQR01000007.1:177813..177831;Note=superfamily%3B label: Sulfatase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 178518 178527 . + . ID=id-AFQR01000007.1:178518..178527;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 178795 179013 . - . ID=gene-GGE_0438;Name=GGE_0438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0438 GCA_000222085.2|AFQR01000007.1 Genbank CDS 178795 179013 . - 0 ID=cds-EGT83075.1;Parent=gene-GGE_0438;Dbxref=GeneID:167016807,InterPro:IPR009857,InterPro:IPR023202,PFAM:PF07208,PIR:PIRSF006188,NCBI_GP:EGT83075.1;Name=EGT83075.1;Note=CGSHiEE_07850;gbkey=CDS;locus_tag=GGE_0438;product=UPF0352 protein;protein_id=EGT83075.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 178795 179011 . - . ID=id-GGE_0438;Dbxref=InterPro:IPR009857,PIR:PIRSF006188;Note=uncharacterised conserved protein%2C ucp006188 type~uncharacterised protein family upf0352;gbkey=misc_feature;locus_tag=GGE_0438 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 178795 179008 . - . ID=id-GGE_0438-2;Dbxref=InterPro:IPR009857,InterPro:IPR023202;Note=superfamily~Gene3D:1.10.3390.10~yejl-like domain~HAMAP:MF_00816~upf0352~uncharacterised protein family upf0352%3B label: DUF1414 superfamily;gbkey=misc_feature;locus_tag=GGE_0438 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 178795 179002 . - . ID=id-GGE_0438-3;Dbxref=InterPro:IPR009857;Note=BlastProDom:PD027794~y1007_haei8_q4qm60~uncharacterised protein family upf0352;gbkey=misc_feature;locus_tag=GGE_0438 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 178873 178927 . - . ID=id-GGE_0438-4;Dbxref=InterPro:IPR009857,PFAM:PF07208;Note=duf1414~uncharacterised protein family upf0352;gbkey=misc_feature;locus_tag=GGE_0438 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 179096 179105 . + . ID=id-AFQR01000007.1:179096..179105;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 179142 180158 . + . ID=gene-GGE_0439;Name=GGE_0439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0439 GCA_000222085.2|AFQR01000007.1 Genbank CDS 179142 180158 . + 0 ID=cds-EGT83076.1;Parent=gene-GGE_0439;Dbxref=GeneID:166233937,InterPro:IPR007358,PFAM:PF04245,NCBI_GP:EGT83076.1;Name=EGT83076.1;Note=CGSHiEE_07855;Ontology_term=GO:0009295;gbkey=CDS;go_component=nucleoid|0009295||;locus_tag=GGE_0439;product=Nucleoid-associated protein;protein_id=EGT83076.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 179142 180153 . + . ID=id-GGE_0439;Note=superfamily%3B label: NA37 superfamily;gbkey=misc_feature;locus_tag=GGE_0439 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 179151 180138 . + . ID=id-GGE_0439-2;Dbxref=InterPro:IPR007358,PFAM:PF04245;Note=na37~nucleoid-associated protein ndpa;gbkey=misc_feature;locus_tag=GGE_0439 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 179151 180135 . + . ID=id-GGE_0439-3;Dbxref=InterPro:IPR007358;Note=HAMAP:MF_00730~ndpa~nucleoid-associated protein ndpa;gbkey=misc_feature;locus_tag=GGE_0439 GCA_000222085.2|AFQR01000007.1 Genbank gene 180223 180636 . + . ID=gene-GGE_0440;Name=smpA;gbkey=Gene;gene=smpA;gene_biotype=protein_coding;locus_tag=GGE_0440 GCA_000222085.2|AFQR01000007.1 Genbank CDS 180223 180636 . + 0 ID=cds-EGT83077.1;Parent=gene-GGE_0440;Dbxref=GeneID:8039800,InterPro:IPR007450,PFAM:PF04355,NCBI_GP:EGT83077.1;Name=EGT83077.1;Ontology_term=GO:0019867;gbkey=CDS;gene=smpA;go_component=outer membrane|0019867||;locus_tag=GGE_0440;product=Small protein A;protein_id=EGT83077.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180223 180634 . + . ID=id-GGE_0440;Note=superfamily%3B label: SmpA_OmlA superfamily;gbkey=misc_feature;gene=smpA;locus_tag=GGE_0440 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180223 180280 . + . ID=id-GGE_0440-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=smpA;locus_tag=GGE_0440 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180325 180433 . + . ID=id-GGE_0440-3;Dbxref=InterPro:IPR007450,PFAM:PF04355;Note=smpa_omla~lipoprotein smpa/omla;gbkey=misc_feature;gene=smpA;locus_tag=GGE_0440 GCA_000222085.2|AFQR01000007.1 Genbank gene 180691 181377 . + . ID=gene-GGE_0441;Name=GGE_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank CDS 180691 181377 . + 0 ID=cds-EGT83078.1;Parent=gene-GGE_0441;Dbxref=GeneID:145636601,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,PFAM:PF00072,PFAM:PF00486,NCBI_GP:EGT83078.1;Name=EGT83078.1;Note=ZP_01792268;Ontology_term=GO:0006355,GO:0000160,GO:0003677,GO:0000156;gbkey=CDS;go_function=DNA binding|0003677||,two-component response regulator activity|0000156||;go_process=regulation of transcription DNA-dependent|0006355||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_0441;product=nucleoid-associated protein NdpA;protein_id=EGT83078.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180691 181375 . + . ID=id-GGE_0441;Note=HMMPanther:PTHR26402:SF67~subfamily not named~HMMPanther:PTHR26402~family not named;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180691 181267 . + . ID=id-GGE_0441-2;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180697 181063 . + . ID=id-GGE_0441-3;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180700 181030 . + . ID=id-GGE_0441-4;Dbxref=InterPro:IPR001789;Note=ProfileScan:PS50110~response_regulatory~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180703 181018 . + . ID=id-GGE_0441-5;Dbxref=InterPro:IPR001789,PFAM:PF00072;Note=response_reg~signal transduction response regulator%2C receiver domain;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180703 180754 . + . ID=id-GGE_0441-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180766 180964 . + . ID=id-GGE_0441-7;Note=specific~superfamily%3B label: REC;gbkey=misc_feature;locus_tag=GGE_0441 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180919 181144 . - . ID=id-AFQR01000007.1:180919..181144;Dbxref=InterPro:IPR001867,PFAM:PF00486;Note=trans_reg_c~signal transduction response regulator;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180976 181087 . - . ID=id-AFQR01000007.1:180976..181087;Note=specific~superfamily%3B label: trans_reg_C;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 180991 181075 . - . ID=id-AFQR01000007.1:180991..181075;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank gene 181382 182791 . + . ID=gene-GGE_0442;Name=GGE_0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0442 GCA_000222085.2|AFQR01000007.1 Genbank CDS 181382 182791 . + 0 ID=cds-EGT83079.1;Parent=gene-GGE_0442;Dbxref=GeneID:325579100,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,PFAM:PF00512,PFAM:PF00672,PFAM:PF02518,NCBI_GP:EGT83079.1;Name=EGT83079.1;Note=ZP_08149056;Ontology_term=GO:0018106,GO:0016310,GO:0007165,GO:0016021,GO:0016020,GO:0005524,GO:0004673,GO:0004871,GO:0016772,GO:0000155;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,protein histidine kinase activity|0004673||,signal transducer activity|0004871||,transferase activity transferring phosphorus-containing groups|0016772||,two-component sensor activity|0000155||;go_process=peptidyl-histidine phosphorylation|0018106||,phosphorylation|0016310||,signal transduction|0007165||;locus_tag=GGE_0442;product=two-component sensor histidine kinase CpxA;protein_id=EGT83079.1;transl_table=11 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181400 182774 . + . ID=id-GGE_0442;Note=multi-dom%3B label: cpxA;gbkey=misc_feature;locus_tag=GGE_0442 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181418 181451 . + . ID=id-GGE_0442-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0442 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181766 182396 . + . ID=id-GGE_0442-3;Note=HMMPanther:PTHR24423:SF254~sensor protein cpxa~HMMPanther:PTHR24423~family not named;gbkey=misc_feature;locus_tag=GGE_0442 GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181406 182531 . - . ID=id-AFQR01000007.1:181406..182531;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181412 181886 . - . ID=id-AFQR01000007.1:181412..181886;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181415 182612 . - . ID=id-AFQR01000007.1:181415..182612;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181421 182645 . - . ID=id-AFQR01000007.1:181421..182645;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181424 182735 . - . ID=id-AFQR01000007.1:181424..182735;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181427 182558 . - . ID=id-AFQR01000007.1:181427..182558;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181436 181886 . - . ID=id-AFQR01000007.1:181436..181886;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181439 182663 . - . ID=id-AFQR01000007.1:181439..182663;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181547 181943 . - . ID=id-AFQR01000007.1:181547..181943;Dbxref=InterPro:IPR003660;Note=ProfileScan:PS50885~hamp~hamp linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181550 181925 . - . ID=id-AFQR01000007.1:181550..181925;Note=superfamily%3B label: HAMP superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181556 182111 . - . ID=id-AFQR01000007.1:181556..182111;Note=specific~superfamily%3B label: HisKA;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181556 182078 . - . ID=id-AFQR01000007.1:181556..182078;Note=Gene3D:1.10.287.240;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181562 182111 . - . ID=id-AFQR01000007.1:181562..182111;Dbxref=InterPro:IPR003661,PFAM:PF00512;Note=hiska~signal transduction histidine kinase%2C subgroup 1%2C dimerization/phosphoacceptor domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181589 181886 . - . ID=id-AFQR01000007.1:181589..181886;Dbxref=InterPro:IPR003660,PFAM:PF00672;Note=hamp~hamp linker domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181631 182054 . - . ID=id-AFQR01000007.1:181631..182054;Dbxref=InterPro:IPR009082;Note=superfamily:SSF47384~homodimeric domain of signal transducing histidine kinase~signal transduction histidine kinase%2C homodimeric;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181706 182450 . - . ID=id-AFQR01000007.1:181706..182450;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181712 182450 . - . ID=id-AFQR01000007.1:181712..182450;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181871 182300 . - . ID=id-AFQR01000007.1:181871..182300;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 181910 182252 . - . ID=id-AFQR01000007.1:181910..182252;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000007.1 Genbank sequence_feature 182039 182129 . - . ID=id-AFQR01000007.1:182039..182129;Dbxref=InterPro:IPR005467;Note=ProfileScan:PS50109~his_kin~signal transduction histidine kinase%2C core;gbkey=misc_feature ##sequence-region AFQR01000006.1 1 67882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000006.1 Genbank region 1 67882 . + . ID=AFQR01000006.1:1..67882;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000006.1 Genbank gene 3 314 . - . ID=gene-GGE_0216;Name=GGE_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0216 GCA_000222085.2|AFQR01000006.1 Genbank CDS 3 314 . - 0 ID=cds-EGT83088.1;Parent=gene-GGE_0216;Dbxref=GeneID:148826724,NCBI_GP:EGT83088.1;Name=EGT83088.1;Note=YP_001291477;gbkey=CDS;locus_tag=GGE_0216;product=aspartate-semialdehyde dehydrogenase;protein_id=EGT83088.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 12 303 . - . ID=id-GGE_0216;Note=BlastProDom:PD394376~q4qms4_haei8_q4qms4;gbkey=misc_feature;locus_tag=GGE_0216 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42 72 . - . ID=id-GGE_0216-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0216 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 63 240 . + . ID=id-AFQR01000006.1:63..240;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 72 153 . + . ID=id-AFQR01000006.1:72..153;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 979 988 . - . ID=id-AFQR01000006.1:979..988;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 1018 3495 . - . ID=gene-GGE_0217;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank CDS 1018 3495 . - 0 ID=cds-EGT83089.1;Parent=gene-GGE_0217;Dbxref=GeneID:1168675,InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006658,InterPro:IPR009010,PFAM:PF00384,PFAM:PF01568,TIGRFAM:TIGR00509,TIGRFAM:TIGR01409,NCBI_GP:EGT83089.1;Name=EGT83089.1;Ontology_term=GO:0055114,GO:0005488,GO:0009055,GO:0030151,GO:0016491;gbkey=CDS;gene=torZ;go_function=binding|0005488||,electron carrier activity|0009055||,molybdenum ion binding|0030151||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0217;product=Trimethylamine-N-oxide reductase;protein_id=EGT83089.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1018 1138 . - . ID=id-GGE_0217;Dbxref=InterPro:IPR006311;Note=ProfileScan:PS51318~tat~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1048 1111 . - . ID=id-GGE_0217-2;Dbxref=InterPro:IPR006311,TIGRFAM:TIGR01409;Note=tat_signal_seq: tat (twin-arginine tra~twin-arginine translocation pathway%2C signal sequence;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1096 3310 . - . ID=id-GGE_0217-3;Note=HMMPanther:PTHR11615:SF19~trimethylamine n-oxide reductase~HMMPanther:PTHR11615~family not named;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1156 2929 . - . ID=id-GGE_0217-4;Note=superfamily:SSF53706~formate dehydrogenase/dmso reductase%2C domains 1-3;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1168 2881 . - . ID=id-GGE_0217-5;Note=specific~superfamily%3B label: Molybdopterin-Binding superfamily;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1171 3343 . - . ID=id-GGE_0217-6;Dbxref=InterPro:IPR006658,TIGRFAM:TIGR00509;Note=bisc_fam: molybdopterin guanine dinucl~molybdopterin guanine dinucleotide-containing s/n-oxide reductase;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1171 3340 . - . ID=id-GGE_0217-7;Note=multi-dom%3B label: bisC_fam;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1300 2425 . - . ID=id-GGE_0217-8;Dbxref=InterPro:IPR006656,PFAM:PF00384;Note=molybdopterin~molybdopterin oxidoreductase;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1591 1678 . - . ID=id-GGE_0217-9;Note=Gene3D:3.40.228.10;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3379 3388 . - . ID=id-GGE_0217-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=torZ;locus_tag=GGE_0217 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1057 2770 . + . ID=id-AFQR01000006.1:1057..2770;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1057 2170 . + . ID=id-AFQR01000006.1:1057..2170;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1072 2530 . + . ID=id-AFQR01000006.1:1072..2530;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00490~molybdopterin_prok_2~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1072 1072 . + . ID=id-AFQR01000006.1:1072..1072;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1102 3175 . + . ID=id-AFQR01000006.1:1102..3175;Dbxref=InterPro:IPR006655;Note=PatternScan:PS00932~molybdopterin_prok_3~molybdopterin oxidoreductase%2C prokaryotic%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1384 3058 . + . ID=id-AFQR01000006.1:1384..3058;Dbxref=InterPro:IPR006657,PFAM:PF01568;Note=molydop_binding~molydopterin dinucleotide-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1384 2365 . + . ID=id-AFQR01000006.1:1384..2365;Note=Gene3D:3.40.50.740;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1408 3052 . + . ID=id-AFQR01000006.1:1408..3052;Note=specific~superfamily%3B label: MopB_CT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1510 2983 . + . ID=id-AFQR01000006.1:1510..2983;Dbxref=InterPro:IPR009010;Note=Gene3D:2.40.40.20~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 1519 2941 . + . ID=id-AFQR01000006.1:1519..2941;Dbxref=InterPro:IPR009010;Note=superfamily:SSF50692~adc-like~aspartate decarboxylase-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 3523 4623 . - . ID=gene-GGE_0218;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank CDS 3523 4623 . - 0 ID=cds-EGT83090.1;Parent=gene-GGE_0218;Dbxref=GeneID:1175277,InterPro:IPR005126,InterPro:IPR009056,InterPro:IPR009154,InterPro:IPR011031,InterPro:IPR018588,PFAM:PF03264,PFAM:PF09626,PIR:PIRSF000014,NCBI_GP:EGT83090.1;Name=EGT83090.1;Ontology_term=GO:0009276,GO:0016021,GO:0009055,GO:0020037,GO:0005506;gbkey=CDS;gene=torY;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||;locus_tag=GGE_0218;product=Cytochrome c-type protein TorY;protein_id=EGT83090.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3523 4621 . - . ID=id-GGE_0218;Dbxref=InterPro:IPR009154,PIR:PIRSF000014;Note=cytochrome c-type protein~membrane-bound tetrahaem cytochrome torc/yeck;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3523 4039 . - . ID=id-GGE_0218-2;Note=superfamily:SSF48695~multiheme cytochromes;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3535 4027 . - . ID=id-GGE_0218-3;Dbxref=InterPro:IPR005126,PFAM:PF03264;Note=cytochrom_nnt~napc/nirt cytochrome c;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3544 3592 . - . ID=id-GGE_0218-4;Note=transmembrane_regions;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3547 4600 . - . ID=id-GGE_0218-5;Note=multi-dom%3B label: torC;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3607 3961 . - . ID=id-GGE_0218-6;Note=superfamily%3B label: PRK10617 superfamily;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3619 4399 . - . ID=id-GGE_0218-7;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature;gene=torY;locus_tag=GGE_0218 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3610 4423 . + . ID=id-AFQR01000006.1:3610..4423;Note=Gene3D:1.10.780.10;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3685 4459 . + . ID=id-AFQR01000006.1:3685..4459;Dbxref=InterPro:IPR018588,PFAM:PF09626;Note=dhc~dihaem cytochrome c;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 3694 4435 . + . ID=id-AFQR01000006.1:3694..4435;Dbxref=InterPro:IPR009056;Note=superfamily:SSF46626~cytochrome c~cytochrome c domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4589 4598 . + . ID=id-AFQR01000006.1:4589..4598;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 4778 5725 . - . ID=gene-GGE_0219;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank CDS 4778 5725 . - 0 ID=cds-EGT83091.1;Parent=gene-GGE_0219;Dbxref=InterPro:IPR000073,PFAM:PF00561,NCBI_GP:EGT83091.1;Name=EGT83091.1;gbkey=CDS;gene=pldB;locus_tag=GGE_0219;product=Putative lysophospholipase L2;protein_id=EGT83091.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4787 5708 . - . ID=id-GGE_0219;Note=HMMPanther:PTHR11614:SF2~gb def: lysophospholipase l2 (ec 3.1.1.5) (lecithinase b)~HMMPanther:PTHR11614~family not named;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4820 5675 . - . ID=id-GGE_0219-2;Note=multi-dom%3B label: PldB;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4838 5657 . - . ID=id-GGE_0219-3;Note=Gene3D:3.40.50.1820;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4847 5648 . - . ID=id-GGE_0219-4;Note=superfamily:SSF53474~alpha/beta-hydrolases;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4874 5033 . - . ID=id-GGE_0219-5;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5006 5468 . - . ID=id-GGE_0219-6;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5006 5462 . - . ID=id-GGE_0219-7;Dbxref=InterPro:IPR000073,PFAM:PF00561;Note=abhydrolase_1~alpha/beta hydrolase fold-1;gbkey=misc_feature;gene=pldB;locus_tag=GGE_0219 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 4896 4905 . + . ID=id-AFQR01000006.1:4896..4905;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5361 5370 . + . ID=id-AFQR01000006.1:5361..5370;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 5804 6919 . - . ID=gene-GGE_0220;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank CDS 5804 6919 . - 0 ID=cds-EGT83092.1;Parent=gene-GGE_0220;Dbxref=GeneID:1169296,InterPro:IPR000319,InterPro:IPR000534,InterPro:IPR011534,InterPro:IPR012080,InterPro:IPR012280,InterPro:IPR016040,PFAM:PF01118,PFAM:PF02774,PIR:PIRSF000148,TIGRFAM:TIGR01745,NCBI_GP:EGT83092.1;Name=EGT83092.1;Ontology_term=GO:0008652,GO:0006520,GO:0009089,GO:0008152,GO:0055114,GO:0005737,GO:0051287,GO:0050661,GO:0004073,GO:0005488,GO:0003824,GO:0016620,GO:0046983;gbkey=CDS;gene=asd;go_component=cytoplasm|0005737||;go_function=NAD or NADH binding|0051287||,NADP or NADPH binding|0050661||,aspartate-semialdehyde dehydrogenase activity|0004073||,binding|0005488||,catalytic activity|0003824||,oxidoreductase activity acting on the aldehyde or oxo group of donors NAD or NADP as acceptor|0016620||,protein dimerization activity|0046983||;go_process=cellular amino acid biosynthetic process|0008652||,cellular amino acid metabolic process|0006520||,lysine biosynthetic process via diaminopimelate|0009089||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0220;product=Aspartate-semialdehyde dehydrogenase;protein_id=EGT83092.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5804 6917 . - . ID=id-GGE_0220;Note=multi-dom%3B label: PRK06598;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5804 6914 . - . ID=id-GGE_0220-2;Dbxref=InterPro:IPR012080,PIR:PIRSF000148;Note=aspartate-semialdehyde dehydrogenase~aspartate-semialdehyde dehydrogenase;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5804 6248 . - . ID=id-GGE_0220-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5804 6233 . - . ID=id-GGE_0220-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5810 6911 . - . ID=id-GGE_0220-5;Dbxref=InterPro:IPR011534,TIGRFAM:TIGR01745;Note=asd_gamma: aspartate-semialdehyde dehydroge~aspartate-semialdehyde dehydrogenase%2C proteobacteria;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5813 6161 . - . ID=id-GGE_0220-6;Dbxref=InterPro:IPR000534,PFAM:PF01118;Note=semialdhyde_dh~semialdehyde dehydrogenase%2C nad-binding;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5813 6158 . - . ID=id-GGE_0220-7;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 6209 6473 . - . ID=id-GGE_0220-8;Note=superfamily:SSF55347~glyceraldehyde-3-phosphate dehydrogenase-like domain;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 6236 6434 . - . ID=id-GGE_0220-9;Note=Gene3D:3.30.360.10;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 6239 6440 . - . ID=id-GGE_0220-10;Note=superfamily%3B label: Semialdhyde_dhC superfamily;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 6242 6437 . - . ID=id-GGE_0220-11;Dbxref=InterPro:IPR012280,PFAM:PF02774;Note=semialdhyde_dhc~semialdehyde dehydrogenase%2C dimerization domain;gbkey=misc_feature;gene=asd;locus_tag=GGE_0220 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 5849 6596 . + . ID=id-AFQR01000006.1:5849..6596;Dbxref=InterPro:IPR000319;Note=PatternScan:PS01103~asd~aspartate-semialdehyde dehydrogenase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 6266 6452 . + . ID=id-AFQR01000006.1:6266..6452;Note=HMMPanther:PTHR10174:SF2~aspartate-semialdehyde dehydrogenase~HMMPanther:PTHR10174~retinaldehyde binding protein-related;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 7085 7801 . - . ID=gene-GGE_0221;Name=GGE_0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0221 GCA_000222085.2|AFQR01000006.1 Genbank CDS 7085 7801 . - 0 ID=cds-EGT83093.1;Parent=gene-GGE_0221;Dbxref=GeneID:2833493,InterPro:IPR003416,PFAM:PF02308,NCBI_GP:EGT83093.1;Name=EGT83093.1;Note=HI_0647;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0221;product=putative mgtC/SapB transporter;protein_id=EGT83093.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7130 7148 . - . ID=id-GGE_0221;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0221 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7133 7754 . - . ID=id-GGE_0221-2;Note=multi-dom%3B label: SapB;gbkey=misc_feature;locus_tag=GGE_0221 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7154 7502 . - . ID=id-GGE_0221-3;Note=superfamily%3B label: MgtC superfamily;gbkey=misc_feature;locus_tag=GGE_0221 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7154 7499 . - . ID=id-GGE_0221-4;Dbxref=InterPro:IPR003416,PFAM:PF02308;Note=mgtc~mgtc/sapb transporter;gbkey=misc_feature;locus_tag=GGE_0221 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7136 7427 . + . ID=id-AFQR01000006.1:7136..7427;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7142 7220 . + . ID=id-AFQR01000006.1:7142..7220;Dbxref=InterPro:IPR003416;Note=FPrintScan:PR01837~mgtcsapbprot~mgtc/sapb transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7145 7331 . + . ID=id-AFQR01000006.1:7145..7331;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7145 7229 . + . ID=id-AFQR01000006.1:7145..7229;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7145 7163 . + . ID=id-AFQR01000006.1:7145..7163;Dbxref=InterPro:IPR003416;Note=FPrintScan:PR01837~mgtcsapbprot~mgtc/sapb transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7154 7490 . + . ID=id-AFQR01000006.1:7154..7490;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7154 7409 . + . ID=id-AFQR01000006.1:7154..7409;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7154 7325 . + . ID=id-AFQR01000006.1:7154..7325;Dbxref=InterPro:IPR003416;Note=FPrintScan:PR01837~mgtcsapbprot~mgtc/sapb transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7160 7409 . + . ID=id-AFQR01000006.1:7160..7409;Dbxref=InterPro:IPR003416;Note=FPrintScan:PR01837~mgtcsapbprot~mgtc/sapb transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7767 7776 . + . ID=id-AFQR01000006.1:7767..7776;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 7954 9291 . + . ID=gene-GGE_0222;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank CDS 7954 9291 . + 0 ID=cds-EGT83094.1;Parent=gene-GGE_0222;Dbxref=InterPro:IPR002792,InterPro:IPR005839,InterPro:IPR005840,InterPro:IPR007197,InterPro:IPR012340,InterPro:IPR013848,InterPro:IPR020612,InterPro:IPR023404,PFAM:PF00919,PFAM:PF04055,TIGRFAM:TIGR00089,TIGRFAM:TIGR01125,NCBI_GP:EGT83094.1;Name=EGT83094.1;Ontology_term=GO:0009451,GO:0018339,GO:0005575,GO:0005737,GO:0051539,GO:0003824,GO:0051536,GO:0016740;gbkey=CDS;gene=rimO;go_component=cellular_component|0005575||,cytoplasm|0005737||;go_function=4 iron 4 sulfur cluster binding|0051539||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,transferase activity|0016740||;go_process=RNA modification|0009451||,peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||;locus_tag=GGE_0222;product=Ribosomal protein S12 methylthiotransferase RimO;protein_id=EGT83094.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7954 9289 . + . ID=id-GGE_0222;Note=multi-dom%3B label: rimO;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7969 9274 . + . ID=id-GGE_0222-2;Dbxref=InterPro:IPR005839;Note=HMMPanther:PTHR11918~family not named~methylthiotransferase;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7972 9274 . + . ID=id-GGE_0222-3;Dbxref=InterPro:IPR005840;Note=HAMAP:MF_01865~mttase_rimo~ribosomal protein s12 methylthiotransferase rimo;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7972 8287 . + . ID=id-GGE_0222-4;Dbxref=InterPro:IPR013848;Note=ProfileScan:PS51449~mttase_n~methylthiotransferase;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7975 9265 . + . ID=id-GGE_0222-5;Dbxref=InterPro:IPR005839,InterPro:IPR005840,TIGRFAM:TIGR00089,TIGRFAM:TIGR01125;Note=tigr00089: rna modification enzyme%2C miab fa~methylthiotransferase~tigr01125: miab-like trna modifying enzyme~ribosomal protein s12 methylthiotransferase rimo;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7978 8218 . + . ID=id-GGE_0222-6;Note=superfamily%3B label: UPF0004 superfamily;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 7981 8215 . + . ID=id-GGE_0222-7;Dbxref=InterPro:IPR013848,PFAM:PF00919;Note=upf0004~methylthiotransferase;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8200 8884 . + . ID=id-GGE_0222-8;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8362 8692 . + . ID=id-GGE_0222-9;Dbxref=InterPro:IPR023404;Note=Gene3D:3.80.30.20~radical sam%2C alpha/beta horseshoe;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8380 8602 . + . ID=id-GGE_0222-10;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8383 8506 . + . ID=id-GGE_0222-11;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=rimO;locus_tag=GGE_0222 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8017 8380 . - . ID=id-AFQR01000006.1:8017..8380;Dbxref=InterPro:IPR020612;Note=PatternScan:PS01278~mttase_radical~methylthiotransferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8140 9103 . - . ID=id-AFQR01000006.1:8140..9103;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8155 9091 . - . ID=id-AFQR01000006.1:8155..9091;Dbxref=InterPro:IPR002792;Note=ProfileScan:PS50926~tram~deoxyribonuclease/rho motif-related tram;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 8806 8815 . - . ID=id-AFQR01000006.1:8806..8815;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 9364 10896 . - . ID=gene-GGE_0223;Name=GGE_0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank CDS 9364 10896 . - 0 ID=cds-EGT83095.1;Parent=gene-GGE_0223;Dbxref=InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF03797,TIGRFAM:TIGR01414,NCBI_GP:EGT83095.1;Name=EGT83095.1;Note=Hypothetical autotransporter beta-domain;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||;locus_tag=GGE_0223;product=putative autotransporter betadomain-containing protein;protein_id=EGT83095.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9502 9805 . - . ID=id-GGE_0223;Note=specific~superfamily%3B label: PL_Passenger_AT;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9508 9799 . - . ID=id-GGE_0223-2;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9511 9793 . - . ID=id-GGE_0223-3;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9652 10609 . - . ID=id-GGE_0223-4;Dbxref=InterPro:IPR006315,TIGRFAM:TIGR01414;Note=autotrans_barl: outer membrane autotra~outer membrane autotransporter barrel;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9655 10606 . - . ID=id-GGE_0223-5;Note=multi-dom%3B label: autotrans_barl;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 9964 10297 . - . ID=id-GGE_0223-6;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 10057 10204 . - . ID=id-GGE_0223-7;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 10066 10156 . - . ID=id-GGE_0223-8;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 10069 10147 . - . ID=id-GGE_0223-9;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 10866 10893 . - . ID=id-GGE_0223-10;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 10866 10875 . - . ID=id-GGE_0223-11;Note=seg;gbkey=misc_feature;locus_tag=GGE_0223 GCA_000222085.2|AFQR01000006.1 Genbank gene 11597 13693 . - . ID=gene-GGE_0224;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank CDS 11597 13693 . - 0 ID=cds-EGT83096.1;Parent=gene-GGE_0224;Dbxref=GeneID:1172905,InterPro:IPR000212,InterPro:IPR005752,InterPro:IPR013986,InterPro:IPR014016,InterPro:IPR014017,PFAM:PF00580,TIGRFAM:TIGR01074,NCBI_GP:EGT83096.1;Name=EGT83096.1;Ontology_term=GO:0006281,GO:0006268,GO:0005737,GO:0005524,GO:0004003,GO:0003677,GO:0016787;gbkey=CDS;gene=rep;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,ATP-dependent DNA helicase activity|0004003||,DNA binding|0003677||,hydrolase activity|0016787||;go_process=DNA repair|0006281||,DNA unwinding involved in replication|0006268||;locus_tag=GGE_0224;product=ATP-dependent DNA helicase rep;protein_id=EGT83096.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11672 13580 . - . ID=id-GGE_0224;Dbxref=InterPro:IPR000212;Note=HMMPanther:PTHR11070~family not named~dna helicase%2C uvrd/rep type;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11678 13520 . - . ID=id-GGE_0224-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11681 13607 . - . ID=id-GGE_0224-3;Dbxref=InterPro:IPR005752,TIGRFAM:TIGR01074;Note=rep: atp-dependent dna helicase rep~dna helicase%2C atp-dependent%2C repa type;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11684 12437 . - . ID=id-GGE_0224-4;Dbxref=InterPro:IPR014016;Note=ProfileScan:PS51198~uvrd_helicase_atp_bind~helicase%2C superfamily 1%2C uvrd-related;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11687 13589 . - . ID=id-GGE_0224-5;Note=multi-dom%3B label: rep;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11690 13046 . - . ID=id-GGE_0224-6;Note=superfamily%3B label: UvrD-helicase superfamily;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11690 13043 . - . ID=id-GGE_0224-7;Dbxref=InterPro:IPR000212,PFAM:PF00580;Note=uvrd-helicase~dna helicase%2C uvrd/rep type;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13477 13486 . - . ID=id-GGE_0224-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rep;locus_tag=GGE_0224 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11627 13628 . + . ID=id-AFQR01000006.1:11627..13628;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11765 13328 . + . ID=id-AFQR01000006.1:11765..13328;Note=superfamily%3B label: UvrD-helicase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11810 12005 . + . ID=id-AFQR01000006.1:11810..12005;Dbxref=InterPro:IPR013986;Note=Gene3D:1.10.10.160~dna helicase%2C dexx box type;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11894 13331 . + . ID=id-AFQR01000006.1:11894..13331;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 11900 12218 . + . ID=id-AFQR01000006.1:11900..12218;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 12071 12824 . + . ID=id-AFQR01000006.1:12071..12824;Note=Gene3D:1.10.486.10;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 12446 12524 . + . ID=id-AFQR01000006.1:12446..12524;Dbxref=InterPro:IPR014017;Note=ProfileScan:PS51217~uvrd_helicase_cter~dna helicase%2C uvrd-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 13615 13827 . - . ID=gene-GGE_0225;Name=GGE_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0225 GCA_000222085.2|AFQR01000006.1 Genbank CDS 13615 13827 . - 0 ID=cds-EGT83097.1;Parent=gene-GGE_0225;Dbxref=GeneID:1175278,InterPro:IPR010780,PFAM:PF07119,NCBI_GP:EGT83097.1;Name=EGT83097.1;Note=HI_0650;gbkey=CDS;locus_tag=GGE_0225;product=putative lipoprotein;protein_id=EGT83097.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13615 13756 . - . ID=id-GGE_0225;Note=superfamily%3B label: DUF1375 superfamily;gbkey=misc_feature;locus_tag=GGE_0225 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13615 13666 . - . ID=id-GGE_0225-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0225 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13642 13795 . - . ID=id-GGE_0225-3;Dbxref=InterPro:IPR010780,PFAM:PF07119;Note=duf1375~protein of unknown function duf1375;gbkey=misc_feature;locus_tag=GGE_0225 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13669 13759 . + . ID=id-AFQR01000006.1:13669..13759;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 13824 14294 . - . ID=gene-GGE_0226;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank CDS 13824 14294 . - 0 ID=cds-EGT83098.1;Parent=gene-GGE_0226;Dbxref=GeneID:81336367,InterPro:IPR001980,InterPro:IPR004820,InterPro:IPR004821,InterPro:IPR014729,PFAM:PF01467,TIGRFAM:TIGR00125,TIGRFAM:TIGR01510,NCBI_GP:EGT83098.1;Name=EGT83098.1;Ontology_term=GO:0009058,GO:0015937,GO:0003824,GO:0016779,GO:0004595;gbkey=CDS;gene=coaD;go_function=catalytic activity|0003824||,nucleotidyltransferase activity|0016779||,pantetheine-phosphate adenylyltransferase activity|0004595||;go_process=biosynthetic process|0009058||,coenzyme A biosynthetic process|0015937||;locus_tag=GGE_0226;product=Phosphopantetheine adenylyltransferase;protein_id=EGT83098.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13824 14292 . - . ID=id-GGE_0226;Note=HMMPanther:PTHR21342~family not named~superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13824 14289 . - . ID=id-GGE_0226-2;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13830 14289 . - . ID=id-GGE_0226-3;Dbxref=InterPro:IPR001980;Note=HAMAP:MF_00151~ppat_bact~coenzyme a biosynthesis protein;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13830 13881 . - . ID=id-GGE_0226-4;Dbxref=InterPro:IPR001980;Note=FPrintScan:PR01020~lpsbiosnthss~coenzyme a biosynthesis protein;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13833 14286 . - . ID=id-GGE_0226-5;Dbxref=InterPro:IPR001980,TIGRFAM:TIGR01510;Note=coad_prev_kdtb: pantetheine-phosphate~coenzyme a biosynthesis protein;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13833 14007 . - . ID=id-GGE_0226-6;Dbxref=InterPro:IPR004821,TIGRFAM:TIGR00125;Note=cyt_tran_rel: cytidyltransferase-relat~cytidyltransferase-related;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13836 14280 . - . ID=id-GGE_0226-7;Note=specific~superfamily%3B label: nt_trans superfamily;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13839 14280 . - . ID=id-GGE_0226-8;Note=multi-dom%3B label: nadD;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13839 14211 . - . ID=id-GGE_0226-9;Dbxref=InterPro:IPR004820,PFAM:PF01467;Note=ctp_transf_2~cytidylyltransferase;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13857 14013 . - . ID=id-GGE_0226-10;Note=BlastProDom:PD016147~q82yw0_entfa_q82yw0;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13884 13890 . - . ID=id-GGE_0226-11;Dbxref=InterPro:IPR001980;Note=FPrintScan:PR01020~lpsbiosnthss~coenzyme a biosynthesis protein;gbkey=misc_feature;gene=coaD;locus_tag=GGE_0226 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13875 14079 . + . ID=id-AFQR01000006.1:13875..14079;Dbxref=InterPro:IPR001980;Note=FPrintScan:PR01020~lpsbiosnthss~coenzyme a biosynthesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13893 14160 . + . ID=id-AFQR01000006.1:13893..14160;Dbxref=InterPro:IPR001980;Note=FPrintScan:PR01020~lpsbiosnthss~coenzyme a biosynthesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 13899 13971 . + . ID=id-AFQR01000006.1:13899..13971;Dbxref=InterPro:IPR001980;Note=FPrintScan:PR01020~lpsbiosnthss~coenzyme a biosynthesis protein;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 14291 15574 . - . ID=gene-GGE_0227;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank CDS 14291 15574 . - 0 ID=cds-EGT83099.1;Parent=gene-GGE_0227;Dbxref=InterPro:IPR000380,InterPro:IPR000506,InterPro:IPR000620,InterPro:IPR000847,InterPro:IPR001296,InterPro:IPR001763,InterPro:IPR003439,InterPro:IPR004597,InterPro:IPR004626,InterPro:IPR005019,InterPro:IPR005119,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR006070,InterPro:IPR006151,InterPro:IPR007507,InterPro:IPR008927,InterPro:IPR011257,InterPro:IPR011342,InterPro:IPR011991,InterPro:IPR013023,InterPro:IPR013116,InterPro:IPR013328,InterPro:IPR013498,InterPro:IPR013708,InterPro:IPR014359,InterPro:IPR016040,InterPro:IPR016055,InterPro:IPR016066,InterPro:IPR017871,InterPro:IPR017945,InterPro:IPR022893,InterPro:IPR023535,PFAM:PF00005,PFAM:PF00126,PFAM:PF00408,PFAM:PF00534,PFAM:PF00581,PFAM:PF00892,PFAM:PF01300,PFAM:PF01396,PFAM:PF01450,PFAM:PF01488,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,PFAM:PF03352,PFAM:PF03466,PFAM:PF04413,PFAM:PF07991,PFAM:PF08501,PIR:PIRSF000116,TIGRFAM:TIGR00465,TIGRFAM:TIGR00507,TIGRFAM:TIGR00624,TIGRFAM:TIGR00688,NCBI_GP:EGT83099.1;Name=EGT83099.1;Ontology_term=GO:0006281,GO:0006265,GO:0006284,GO:0009058,GO:0009082,GO:0005975,GO:0008652,GO:0008152,GO:0055114,GO:0006355,GO:0006810,GO:0005694,GO:0005737,GO:0005887,GO:0016020,GO:0005524,GO:0016887,GO:0003677,GO:0003916,GO:0003917,GO:0008725,GO:0050661,GO:0005488,GO:0003824,GO:0050662,GO:0016868,GO:0004455,GO:0000287,GO:0016491,GO:0003700,GO:0004764,GO:0005529,GO:0016740,GO:0005215;gbkey=CDS;gene=waaA;go_component=chromosome|0005694||,cytoplasm|0005737||,integral to plasma membrane|0005887||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,DNA binding|0003677||,DNA topoisomerase activity|0003916||,DNA topoisomerase type I activity|0003917||,DNA-3-methyladenine glycosylase I activity|0008725||,NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,intramolecular transferase activity phosphotransferases|0016868||,ketol-acid reductoisomerase activity|0004455||,magnesium ion binding|0000287||,oxidoreductase activity|0016491||,sequence-specific DNA binding transcription factor activity|0003700||,shikimate 5-dehydrogenase activity|0004764||,sugar binding|0005529||,transferase activity|0016740||,transporter activity|0005215||;go_process=DNA repair|0006281||,DNA topological change|0006265||,base-excision repair|0006284||,biosynthetic process|0009058||,branched chain family amino acid biosynthetic process|0009082||,carbohydrate metabolic process|0005975||,cellular amino acid biosynthetic process|0008652||,metabolic process|0008152||,oxidation-reduction process|0055114||,regulation of transcription DNA-dependent|0006355||,transport|0006810||;locus_tag=GGE_0227;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=EGT83099.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14291 15566 . - . ID=id-GGE_0227;Note=multi-dom%3B label: PRK05749;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14291 15500 . - . ID=id-GGE_0227-2;Note=HMMPanther:PTHR23417:SF2~3-deoxy-d-manno-octulosonic-acid transferase (kdo transferase)~HMMPanther:PTHR23417~family not named;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14291 15418 . - . ID=id-GGE_0227-3;Note=VFDB hit~VFDB:VFG0330;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14303 14360 . - . ID=id-GGE_0227-4;Note=transmembrane_regions;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14384 14846 . - . ID=id-GGE_0227-5;Note=superfamily%3B label: Glycos_transf_N superfamily;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14384 14843 . - . ID=id-GGE_0227-6;Dbxref=InterPro:IPR007507,PFAM:PF04413;Note=glycos_transf_n~three-deoxy-d-manno-octulosonic-acid transferase;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14450 15410 . - . ID=id-GGE_0227-7;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;gene=waaA;locus_tag=GGE_0227 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14327 15062 . + . ID=id-AFQR01000006.1:14327..15062;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14327 14750 . + . ID=id-AFQR01000006.1:14327..14750;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14357 15422 . + . ID=id-AFQR01000006.1:14357..15422;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14360 14408 . + . ID=id-AFQR01000006.1:14360..14408;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14801 14993 . + . ID=id-AFQR01000006.1:14801..14993;Dbxref=InterPro:IPR001296,PFAM:PF00534;Note=glycos_transf_1~glycosyl transferase%2C group 1;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 14807 14990 . + . ID=id-AFQR01000006.1:14807..14990;Note=superfamily%3B label: Glycos_transf_1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 15637 16431 . + . ID=gene-GGE_0228;Name=GGE_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0228 GCA_000222085.2|AFQR01000006.1 Genbank CDS 15637 16431 . + 0 ID=cds-EGT83100.1;Parent=gene-GGE_0228;Dbxref=GeneID:1175279,InterPro:IPR001173,PFAM:PF00535,NCBI_GP:EGT83100.1;Name=EGT83100.1;Note=HI_0653;gbkey=CDS;locus_tag=GGE_0228;product=putative transferase-like protein;protein_id=EGT83100.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 15637 16048 . + . ID=id-GGE_0228;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases~HMMPanther:PTHR22916~family not named;gbkey=misc_feature;locus_tag=GGE_0228 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 15643 15949 . + . ID=id-GGE_0228-2;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_0228 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 15646 16327 . + . ID=id-GGE_0228-3;Note=specific~superfamily%3B label: Beta4Glucosyltransferase;gbkey=misc_feature;locus_tag=GGE_0228 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 15652 16072 . + . ID=id-GGE_0228-4;Dbxref=InterPro:IPR001173,PFAM:PF00535;Note=glycos_transf_2~glycosyl transferase%2C family 2;gbkey=misc_feature;locus_tag=GGE_0228 GCA_000222085.2|AFQR01000006.1 Genbank gene 16398 16955 . - . ID=gene-GGE_0229;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank CDS 16398 16955 . - 0 ID=cds-EGT83101.1;Parent=gene-GGE_0229;Dbxref=GeneID:1168217,InterPro:IPR004597,InterPro:IPR005019,InterPro:IPR011257,PFAM:PF03352,TIGRFAM:TIGR00624,NCBI_GP:EGT83101.1;Name=EGT83101.1;Ontology_term=GO:0006281,GO:0006284,GO:0008725,GO:0003824;gbkey=CDS;gene=tag;go_function=DNA-3-methyladenine glycosylase I activity|0008725||,catalytic activity|0003824||;go_process=DNA repair|0006281||,base-excision repair|0006284||;locus_tag=GGE_0229;product=DNA-3-methyladenine glycosylase;protein_id=EGT83101.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16404 16950 . - . ID=id-GGE_0229;Dbxref=InterPro:IPR011257;Note=superfamily:SSF48150~dna-glycosylase~dna glycosylase;gbkey=misc_feature;gene=tag;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16407 16941 . - . ID=id-GGE_0229-2;Dbxref=InterPro:IPR004597,InterPro:IPR011257,TIGRFAM:TIGR00624;Note=Gene3D:1.10.340.30~dna glycosylase~tag: dna-3-methyladenine glycosylase i~dna-3-methyladenine glycosylase i;gbkey=misc_feature;gene=tag;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16419 16932 . - . ID=id-GGE_0229-3;Dbxref=InterPro:IPR005019,PFAM:PF03352;Note=adenine_glyco~methyladenine glycosylase;gbkey=misc_feature;gene=tag;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16419 16929 . - . ID=id-GGE_0229-4;Note=superfamily%3B label: Adenine_glyco superfamily;gbkey=misc_feature;gene=tag;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16625 16634 . - . ID=id-GGE_0229-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tag;locus_tag=GGE_0229 GCA_000222085.2|AFQR01000006.1 Genbank gene 16952 17770 . - . ID=gene-GGE_0230;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank CDS 16952 17770 . - 0 ID=cds-EGT83102.1;Parent=gene-GGE_0230;Dbxref=GeneID:1168510,InterPro:IPR006151,InterPro:IPR011342,InterPro:IPR013708,InterPro:IPR016040,InterPro:IPR022893,PFAM:PF01488,PFAM:PF08501,TIGRFAM:TIGR00507,NCBI_GP:EGT83102.1;Name=EGT83102.1;Ontology_term=GO:0008152,GO:0055114,GO:0005737,GO:0050661,GO:0005488,GO:0003824,GO:0004764;gbkey=CDS;gene=aroE;go_component=cytoplasm|0005737||;go_function=NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,shikimate 5-dehydrogenase activity|0004764||;go_process=metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0230;product=Shikimate dehydrogenase;protein_id=EGT83102.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16952 17762 . - . ID=id-GGE_0230;Dbxref=InterPro:IPR022893;Note=HAMAP:MF_00222~shikimate_dh_aroe~shikimate%2C quinate/shikimate dehydrogenase;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16952 17729 . - . ID=id-GGE_0230-2;Note=HMMPanther:PTHR21089~family not named;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16952 17255 . - . ID=id-GGE_0230-3;Note=superfamily:SSF53223~aminoacid dehydrogenase-like domain;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16958 17765 . - . ID=id-GGE_0230-4;Dbxref=InterPro:IPR011342,TIGRFAM:TIGR00507;Note=multi-dom~aroe: shikimate 5-dehydrogenase~shikimate dehydrogenase%3B label: aroE;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16958 17270 . - . ID=id-GGE_0230-5;Note=Gene3D:3.40.192.10;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16970 17201 . - . ID=id-GGE_0230-6;Dbxref=InterPro:IPR013708,PFAM:PF08501;Note=superfamily~shikimate_dh_n~shikimate dehydrogenase substrate binding%3B label: Shikimate_dh_N superfamily;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17255 17417 . - . ID=id-GGE_0230-7;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17258 17462 . - . ID=id-GGE_0230-8;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17276 17366 . - . ID=id-GGE_0230-9;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=aroE;locus_tag=GGE_0230 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 16997 17357 . + . ID=id-AFQR01000006.1:16997..17357;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17192 17309 . + . ID=id-AFQR01000006.1:17192..17309;Dbxref=InterPro:IPR006151,PFAM:PF01488;Note=shikimate_dh~quinate/shikimate 5-dehydrogenase/glutamyl-trna reductase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 17774 18325 . - . ID=gene-GGE_0231;Name=rimN;gbkey=Gene;gene=rimN;gene_biotype=protein_coding;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank CDS 17774 18325 . - 0 ID=cds-EGT83103.1;Parent=gene-GGE_0231;Dbxref=GeneID:212277677,InterPro:IPR006070,InterPro:IPR017945,InterPro:IPR023535,PFAM:PF01300,NCBI_GP:EGT83103.1;Name=EGT83103.1;gbkey=CDS;gene=rimN;locus_tag=GGE_0231;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=EGT83103.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17774 18323 . - . ID=id-GGE_0231;Dbxref=InterPro:IPR006070;Note=ProfileScan:PS51163~yrdc~sua5/ycio/yrdc;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17783 18317 . - . ID=id-GGE_0231-2;Dbxref=InterPro:IPR017945;Note=superfamily:SSF55821~yrdc/ribb~dhbp synthase ribb-like alpha/beta domain;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17783 18311 . - . ID=id-GGE_0231-3;Dbxref=InterPro:IPR023535;Note=HAMAP:MF_01852~rimn~trna-t6a modification%2C rimn;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17786 18314 . - . ID=id-GGE_0231-4;Dbxref=InterPro:IPR017945;Note=superfamily~Gene3D:3.90.870.10~dhbp synthase ribb-like alpha/beta domain~HMMPanther:PTHR17490~family not named%3B label: Sua5_yciO_yrdC superfamily;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 17801 18299 . - . ID=id-GGE_0231-5;Dbxref=InterPro:IPR006070,PFAM:PF01300;Note=sua5_ycio_yrdc~sua5/ycio/yrdc;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18218 18227 . - . ID=id-GGE_0231-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rimN;locus_tag=GGE_0231 GCA_000222085.2|AFQR01000006.1 Genbank gene 18341 18877 . - . ID=gene-GGE_0232;Name=GGE_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank CDS 18341 18877 . - 0 ID=cds-EGT83104.1;Parent=gene-GGE_0232;Dbxref=GeneID:1176857,InterPro:IPR000380,InterPro:IPR013498,PFAM:PF01396,NCBI_GP:EGT83104.1;Name=EGT83104.1;Note=HI_0656.1;Ontology_term=GO:0006265,GO:0005694,GO:0003677,GO:0003916,GO:0003917;gbkey=CDS;go_component=chromosome|0005694||;go_function=DNA binding|0003677||,DNA topoisomerase activity|0003916||,DNA topoisomerase type I activity|0003917||;go_process=DNA topological change|0006265||;locus_tag=GGE_0232;product=putative dNA topoisomerase%2C type IA;protein_id=EGT83104.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18374 18689 . - . ID=id-GGE_0232;Dbxref=InterPro:IPR000380;Note=HMMPanther:PTHR11390:SF17~subfamily not named~HMMPanther:PTHR11390~family not named~dna topoisomerase%2C type ia;gbkey=misc_feature;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18377 18455 . - . ID=id-GGE_0232-2;Note=superfamily%3B label: zf-C4_Topoisom superfamily;gbkey=misc_feature;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18380 18452 . - . ID=id-GGE_0232-3;Dbxref=InterPro:IPR013498,PFAM:PF01396;Note=zf-c4_topoisom~dna topoisomerase%2C type ia%2C zn finger;gbkey=misc_feature;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18386 18479 . - . ID=id-GGE_0232-4;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18386 18452 . - . ID=id-GGE_0232-5;Note=Gene3D:3.30.65.10;gbkey=misc_feature;locus_tag=GGE_0232 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18425 18524 . + . ID=id-AFQR01000006.1:18425..18524;Note=Gene3D:3.30.65.10;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18431 18527 . + . ID=id-AFQR01000006.1:18431..18527;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18449 18521 . + . ID=id-AFQR01000006.1:18449..18521;Dbxref=InterPro:IPR013498,PFAM:PF01396;Note=zf-c4_topoisom~dna topoisomerase%2C type ia%2C zn finger;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18455 18653 . + . ID=id-AFQR01000006.1:18455..18653;Note=superfamily%3B label: zf-C4_Topoisom superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18455 18650 . + . ID=id-AFQR01000006.1:18455..18650;Dbxref=InterPro:IPR013498,PFAM:PF01396;Note=zf-c4_topoisom~dna topoisomerase%2C type ia%2C zn finger;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18455 18518 . + . ID=id-AFQR01000006.1:18455..18518;Note=superfamily%3B label: zf-C4_Topoisom superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18458 18641 . + . ID=id-AFQR01000006.1:18458..18641;Note=Gene3D:3.30.65.10;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18518 18620 . + . ID=id-AFQR01000006.1:18518..18620;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 18887 20803 . - . ID=gene-GGE_0233;Name=GGE_0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank CDS 18887 20803 . - 0 ID=cds-EGT83105.1;Parent=gene-GGE_0233;Dbxref=GeneID:1176240,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT83105.1;Name=EGT83105.1;Note=HI_0658;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0233;product=putative abc transporter atp-binding protein yhes-like protein;protein_id=EGT83105.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18887 20801 . - . ID=id-GGE_0233;Note=multi-dom%3B label: PRK10636;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18887 20549 . - . ID=id-GGE_0233-2;Note=HMMPanther:PTHR19211:SF13~abc transporter atp-binding protein yhes-related~HMMPanther:PTHR19211~family not named;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18887 19667 . - . ID=id-GGE_0233-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18893 19694 . - . ID=id-GGE_0233-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18893 19622 . - . ID=id-GGE_0233-5;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18893 19097 . - . ID=id-GGE_0233-6;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19010 19301 . - . ID=id-GGE_0233-7;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=superfamily~abc_tran~abc transporter-like%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19817 19826 . - . ID=id-GGE_0233-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0233 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18920 19688 . + . ID=id-AFQR01000006.1:18920..19688;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18920 19619 . + . ID=id-AFQR01000006.1:18920..19619;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18932 20192 . + . ID=id-AFQR01000006.1:18932..20192;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18932 19367 . + . ID=id-AFQR01000006.1:18932..19367;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18932 19337 . + . ID=id-AFQR01000006.1:18932..19337;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18953 20741 . + . ID=id-AFQR01000006.1:18953..20741;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 18981 18990 . + . ID=id-AFQR01000006.1:18981..18990;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19079 20510 . + . ID=id-AFQR01000006.1:19079..20510;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19109 19337 . + . ID=id-AFQR01000006.1:19109..19337;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19211 19955 . + . ID=id-AFQR01000006.1:19211..19955;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19430 19874 . + . ID=id-AFQR01000006.1:19430..19874;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19475 19826 . + . ID=id-AFQR01000006.1:19475..19826;Note=specific~superfamily%3B label: ABCF_EF-3;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19544 19826 . + . ID=id-AFQR01000006.1:19544..19826;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19556 19817 . + . ID=id-AFQR01000006.1:19556..19817;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 19695 19704 . + . ID=id-AFQR01000006.1:19695..19704;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 20843 21160 . - . ID=gene-GGE_0234;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank CDS 20843 21160 . - 0 ID=cds-EGT83106.1;Parent=gene-GGE_0234;Dbxref=InterPro:IPR001763,PFAM:PF00581,NCBI_GP:EGT83106.1;Name=EGT83106.1;gbkey=CDS;gene=glpE;locus_tag=GGE_0234;product=Thiosulfate sulfurtransferase glpE;protein_id=EGT83106.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20843 21155 . - . ID=id-GGE_0234;Dbxref=InterPro:IPR001763;Note=HAMAP:MF_01009~thiosulf_sulfurtr~superfamily:SSF52821~rhodanese/cell cycle control phosphatase~rhodanese-like;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20849 21152 . - . ID=id-GGE_0234-2;Dbxref=InterPro:IPR001763;Note=Gene3D:3.40.250.10~rhodanese-like;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20858 21119 . - . ID=id-GGE_0234-3;Note=specific~superfamily%3B label: GlpE_ST;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20864 21113 . - . ID=id-GGE_0234-4;Dbxref=InterPro:IPR001763,PFAM:PF00581;Note=rhodanese~rhodanese-like;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20888 21110 . - . ID=id-GGE_0234-5;Dbxref=InterPro:IPR001763;Note=ProfileScan:PS50206~rhodanese_3~rhodanese-like;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 20900 21104 . - . ID=id-GGE_0234-6;Note=HMMPanther:PTHR24769:SF65~thiosulfate sulfurtransferase glpe~HMMPanther:PTHR24769~family not named;gbkey=misc_feature;gene=glpE;locus_tag=GGE_0234 GCA_000222085.2|AFQR01000006.1 Genbank gene 21161 22039 . - . ID=gene-GGE_0235;Name=GGE_0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0235 GCA_000222085.2|AFQR01000006.1 Genbank CDS 21161 22039 . - 0 ID=cds-EGT83107.1;Parent=gene-GGE_0235;Dbxref=InterPro:IPR000620,InterPro:IPR004626,PFAM:PF00892,TIGRFAM:TIGR00688,NCBI_GP:EGT83107.1;Name=EGT83107.1;Note=HI_0680;Ontology_term=GO:0006810,GO:0005887,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0235;product=putative rarD protein;protein_id=EGT83107.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21167 21926 . - . ID=id-GGE_0235;Dbxref=InterPro:IPR004626,TIGRFAM:TIGR00688;Note=multi-dom~rard: protein rard~rard protein%3B label: rarD;gbkey=misc_feature;locus_tag=GGE_0235 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21176 21218 . - . ID=id-GGE_0235-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0235 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21221 21527 . - . ID=id-GGE_0235-3;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_0235 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21269 21497 . - . ID=id-GGE_0235-4;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_0235 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21197 21854 . + . ID=id-AFQR01000006.1:21197..21854;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21215 21608 . + . ID=id-AFQR01000006.1:21215..21608;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21218 21686 . + . ID=id-AFQR01000006.1:21218..21686;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21218 21542 . + . ID=id-AFQR01000006.1:21218..21542;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21221 21464 . + . ID=id-AFQR01000006.1:21221..21464;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21221 21377 . + . ID=id-AFQR01000006.1:21221..21377;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21221 21260 . + . ID=id-AFQR01000006.1:21221..21260;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21230 21947 . + . ID=id-AFQR01000006.1:21230..21947;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21230 21866 . + . ID=id-AFQR01000006.1:21230..21866;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21230 21785 . + . ID=id-AFQR01000006.1:21230..21785;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 21485 21701 . + . ID=id-AFQR01000006.1:21485..21701;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 22071 22949 . - . ID=gene-GGE_0236;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank CDS 22071 22949 . - 0 ID=cds-EGT83108.1;Parent=gene-GGE_0236;Dbxref=GeneID:1170550,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT83108.1;Name=EGT83108.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0236;product=HTH-type transcriptional activator ilvY;protein_id=EGT83108.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22071 22407 . - . ID=id-GGE_0236;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22071 22323 . - . ID=id-GGE_0236-2;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22071 22245 . - . ID=id-GGE_0236-3;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22080 22251 . - . ID=id-GGE_0236-4;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22146 22875 . - . ID=id-GGE_0236-5;Note=multi-dom%3B label: PRK11716;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22332 22689 . - . ID=id-GGE_0236-6;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22332 22686 . - . ID=id-GGE_0236-7;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22335 22497 . - . ID=id-GGE_0236-8;Note=Gene3D:3.40.190.10;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 22347 22662 . - . ID=id-GGE_0236-9;Note=specific~superfamily%3B label: PBP2_IlvY;gbkey=misc_feature;gene=ilvY;locus_tag=GGE_0236 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23240 23249 . - . ID=id-AFQR01000006.1:23240..23249;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 23635 25113 . + . ID=gene-GGE_0237;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank CDS 23635 25113 . + 0 ID=cds-EGT83109.1;Parent=gene-GGE_0237;Dbxref=GeneID:1170545,InterPro:IPR000506,InterPro:IPR008927,InterPro:IPR013023,InterPro:IPR013116,InterPro:IPR013328,InterPro:IPR014359,InterPro:IPR016040,PFAM:PF01450,PFAM:PF07991,PIR:PIRSF000116,TIGRFAM:TIGR00465,NCBI_GP:EGT83109.1;Name=EGT83109.1;Ontology_term=GO:0009082,GO:0008652,GO:0008152,GO:0055114,GO:0050661,GO:0005488,GO:0003824,GO:0050662,GO:0004455,GO:0016491;gbkey=CDS;gene=ilvC;go_function=NADP or NADPH binding|0050661||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,ketol-acid reductoisomerase activity|0004455||,oxidoreductase activity|0016491||;go_process=branched chain family amino acid biosynthetic process|0009082||,cellular amino acid biosynthetic process|0008652||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0237;product=Ketol-acid reductoisomerase;protein_id=EGT83109.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23635 25108 . + . ID=id-GGE_0237;Dbxref=InterPro:IPR014359,PIR:PIRSF000116;Note=ketol-acid reductoisomerase%2C gammaproteobacteria type~ketol-acid reductoisomerase%2C gammaproteobacteria;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23635 25105 . + . ID=id-GGE_0237-2;Dbxref=InterPro:IPR013023;Note=HMMPanther:PTHR21371:SF2~ketol-acid reductoisomerase~HMMPanther:PTHR21371~family not named~acetohydroxy acid isomeroreductase;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23635 24238 . + . ID=id-GGE_0237-3;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23641 25099 . + . ID=id-GGE_0237-4;Note=multi-dom%3B label: PRK05225;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23647 24247 . + . ID=id-GGE_0237-5;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23701 25030 . + . ID=id-GGE_0237-6;Dbxref=InterPro:IPR013023;Note=HAMAP:MF_00435~ilvc~acetohydroxy acid isomeroreductase;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23740 24640 . + . ID=id-GGE_0237-7;Dbxref=InterPro:IPR013023,TIGRFAM:TIGR00465;Note=ilvc: ketol-acid reductoisomerase~acetohydroxy acid isomeroreductase;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 23740 24145 . + . ID=id-GGE_0237-8;Dbxref=InterPro:IPR013116,PFAM:PF07991;Note=superfamily~ilvn~acetohydroxy acid isomeroreductase%2C catalytic%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=ilvC;locus_tag=GGE_0237 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24007 24265 . - . ID=id-AFQR01000006.1:24007..24265;Note=superfamily%3B label: IlvC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24013 24718 . - . ID=id-AFQR01000006.1:24013..24718;Dbxref=InterPro:IPR000506,PFAM:PF01450;Note=ilvc~acetohydroxy acid isomeroreductase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24013 24265 . - . ID=id-AFQR01000006.1:24013..24265;Dbxref=InterPro:IPR000506,PFAM:PF01450;Note=ilvc~acetohydroxy acid isomeroreductase c-terminal;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24022 24709 . - . ID=id-AFQR01000006.1:24022..24709;Dbxref=InterPro:IPR013328;Note=superfamily~Gene3D:1.10.1040.10~dehydrogenase%2C multihelical%3B label: IlvC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24040 24265 . - . ID=id-AFQR01000006.1:24040..24265;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 24055 24673 . - . ID=id-AFQR01000006.1:24055..24673;Dbxref=InterPro:IPR008927;Note=superfamily:SSF48179~6-phosphogluconate dehydrogenase c-terminal domain-like~6-phosphogluconate dehydrogenase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 25177 26886 . - . ID=gene-GGE_0238;Name=GGE_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank CDS 25177 26886 . - 0 ID=cds-EGT83110.1;Parent=gene-GGE_0238;Dbxref=GeneID:2499516,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR016055,InterPro:IPR016066,PFAM:PF00408,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,NCBI_GP:EGT83110.1;Name=EGT83110.1;Note=HI_0740;Ontology_term=GO:0005975,GO:0016868,GO:0000287;gbkey=CDS;go_function=intramolecular transferase activity phosphotransferases|0016868||,magnesium ion binding|0000287||;go_process=carbohydrate metabolic process|0005975||;locus_tag=GGE_0238;product=Putative phosphomannomutase;protein_id=EGT83110.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25225 26815 . - . ID=id-GGE_0238;Note=HMMPanther:PTHR22573:SF2~phosphoglucomutase~HMMPanther:PTHR22573~family not named;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25237 26815 . - . ID=id-GGE_0238-2;Note=multi-dom%3B label: PTZ00150;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25336 25780 . - . ID=id-GGE_0238-3;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25354 25765 . - . ID=id-GGE_0238-4;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25381 26635 . - . ID=id-GGE_0238-5;Note=specific~superfamily%3B label: PGM2;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25384 25594 . - . ID=id-GGE_0238-6;Dbxref=InterPro:IPR005844,PFAM:PF02878;Note=pgm_pmm_i~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain i;gbkey=misc_feature;locus_tag=GGE_0238 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25207 25669 . + . ID=id-AFQR01000006.1:25207..25669;Dbxref=InterPro:IPR016066;Note=PatternScan:PS00710~pgm_pmm~alpha-d-phosphohexomutase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25225 25312 . + . ID=id-AFQR01000006.1:25225..25312;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25366 26647 . + . ID=id-AFQR01000006.1:25366..26647;Dbxref=InterPro:IPR005843,PFAM:PF00408;Note=pgm_pmm_iv~alpha-d-phosphohexomutase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25384 25942 . + . ID=id-AFQR01000006.1:25384..25942;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25474 26524 . + . ID=id-AFQR01000006.1:25474..26524;Note=Gene3D:3.30.310.50;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25489 25870 . + . ID=id-AFQR01000006.1:25489..25870;Dbxref=InterPro:IPR005845,PFAM:PF02879;Note=pgm_pmm_ii~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain ii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25504 25864 . + . ID=id-AFQR01000006.1:25504..25864;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25516 26203 . + . ID=id-AFQR01000006.1:25516..26203;Dbxref=InterPro:IPR005846,PFAM:PF02880;Note=pgm_pmm_iii~alpha-d-phosphohexomutase%2C alpha/beta/alpha domain iii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25552 26149 . + . ID=id-AFQR01000006.1:25552..26149;Dbxref=InterPro:IPR016055;Note=Gene3D:3.40.120.10~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25570 26494 . + . ID=id-AFQR01000006.1:25570..26494;Note=superfamily:SSF55957~phosphoglucomutase domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 25591 26140 . + . ID=id-AFQR01000006.1:25591..26140;Dbxref=InterPro:IPR016055;Note=superfamily:SSF53738~phosphoglucomutase%2C first 3 domains~alpha-d-phosphohexomutase%2C alpha/beta/alpha i/ii/iii;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 26747 26756 . + . ID=id-AFQR01000006.1:26747..26756;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27043 27052 . - . ID=id-AFQR01000006.1:27043..27052;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 27065 30544 . + . ID=gene-GGE_0239;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank CDS 27065 30544 . + 0 ID=cds-EGT83111.1;Parent=gene-GGE_0239;Dbxref=GeneID:1169392,InterPro:IPR004013,InterPro:IPR004365,InterPro:IPR004805,InterPro:IPR011708,InterPro:IPR016195,PFAM:PF01336,PFAM:PF02811,PFAM:PF07733,TIGRFAM:TIGR00594,NCBI_GP:EGT83111.1;Name=EGT83111.1;Ontology_term=GO:0006260,GO:0005737,GO:0008408,GO:0003824,GO:0003676;gbkey=CDS;gene=dnaE;go_component=cytoplasm|0005737||;go_function=3'-5' exonuclease activity|0008408||,catalytic activity|0003824||,nucleic acid binding|0003676||;go_process=DNA replication|0006260||;locus_tag=GGE_0239;product=DNA polymerase III subunit alpha;protein_id=EGT83111.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27083 30500 . + . ID=id-GGE_0239;Note=multi-dom%3B label: dnaE;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27083 27842 . + . ID=id-GGE_0239-2;Dbxref=InterPro:IPR016195;Note=superfamily:SSF89550~php domain-like~polymerase/histidinol phosphatase-like;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27086 30137 . + . ID=id-GGE_0239-3;Dbxref=InterPro:IPR004805,TIGRFAM:TIGR00594;Note=polc: dna polymerase iii%2C alpha subunit~dna polymerase iii%2C alpha subunit;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27086 27803 . + . ID=id-GGE_0239-4;Note=Gene3D:3.20.20.140;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27089 27578 . + . ID=id-GGE_0239-5;Dbxref=InterPro:IPR004013,PFAM:PF02811;Note=php~php;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27092 27266 . + . ID=id-GGE_0239-6;Note=superfamily%3B label: POLIIIAc superfamily;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27518 27527 . + . ID=id-GGE_0239-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27935 28403 . + . ID=id-GGE_0239-8;Note=superfamily%3B label: DNA_pol3_alpha superfamily;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27938 28400 . + . ID=id-GGE_0239-9;Dbxref=InterPro:IPR011708,PFAM:PF07733;Note=dna_pol3_alpha~bacterial dna polymerase iii%2C alpha subunit;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27997 28006 . + . ID=id-GGE_0239-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30515 30524 . + . ID=id-GGE_0239-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dnaE;locus_tag=GGE_0239 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27110 28199 . - . ID=id-AFQR01000006.1:27110..28199;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27212 29573 . - . ID=id-AFQR01000006.1:27212..29573;Note=Gene3D:1.10.150.280;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27293 30047 . - . ID=id-AFQR01000006.1:27293..30047;Dbxref=InterPro:IPR004365,PFAM:PF01336;Note=trna_anti~nucleic acid binding%2C ob-fold%2C trna/helicase-type;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 27323 30047 . - . ID=id-AFQR01000006.1:27323..30047;Note=specific~superfamily%3B label: DnaE_OBF;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 30583 32124 . - . ID=gene-GGE_0240;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank CDS 30583 32124 . - 0 ID=cds-EGT83112.1;Parent=gene-GGE_0240;Dbxref=GeneID:1174667,InterPro:IPR000634,InterPro:IPR001721,InterPro:IPR001926,InterPro:IPR005787,PFAM:PF00291,PFAM:PF00585,TIGRFAM:TIGR01124,NCBI_GP:EGT83112.1;Name=EGT83112.1;Ontology_term=GO:0006520,GO:0009097,GO:0008152,GO:0004794,GO:0003824,GO:0030170;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||,catalytic activity|0003824||,pyridoxal phosphate binding|0030170||;go_process=cellular amino acid metabolic process|0006520||,isoleucine biosynthetic process|0009097||,metabolic process|0008152||;locus_tag=GGE_0240;product=Threonine dehydratase biosynthetic;protein_id=EGT83112.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30583 31687 . - . ID=id-GGE_0240;Dbxref=InterPro:IPR001926;Note=superfamily:SSF53686~tryptophan synthase beta subunit-like plp-dependent enzyme~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30616 32092 . - . ID=id-GGE_0240-2;Note=multi-dom%3B label: PRK09224;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30616 31819 . - . ID=id-GGE_0240-3;Note=HMMPanther:PTHR10314:SF30~threonine dehydratase~HMMPanther:PTHR10314~ser/thr dehydratase%2C trp synthase;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30625 32080 . - . ID=id-GGE_0240-4;Dbxref=InterPro:IPR005787,TIGRFAM:TIGR01124;Note=ilva_2cterm: threonine ammonia-lyase%2C bio~threonine dehydratase i;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30658 31474 . - . ID=id-GGE_0240-5;Note=specific~superfamily%3B label: Thr-dehyd;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30673 31447 . - . ID=id-GGE_0240-6;Dbxref=InterPro:IPR001926,PFAM:PF00291;Note=palp~pyridoxal phosphate-dependent enzyme%2C beta subunit;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30829 31297 . - . ID=id-GGE_0240-7;Note=Gene3D:3.40.50.1100;gbkey=misc_feature;gene=ilvA;locus_tag=GGE_0240 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30625 30745 . + . ID=id-AFQR01000006.1:30625..30745;Dbxref=InterPro:IPR000634;Note=PatternScan:PS00165~dehydratase_ser_thr~serine/threonine dehydratase%2C pyridoxal-phosphate-binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30631 31141 . + . ID=id-AFQR01000006.1:30631..31141;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30826 31879 . + . ID=id-AFQR01000006.1:30826..31879;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30835 31600 . + . ID=id-AFQR01000006.1:30835..31600;Note=specific~superfamily%3B label: ACT superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30844 31861 . + . ID=id-AFQR01000006.1:30844..31861;Dbxref=InterPro:IPR001721,PFAM:PF00585;Note=thr_dehydrat_c~threonine dehydratase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30853 31573 . + . ID=id-AFQR01000006.1:30853..31573;Dbxref=InterPro:IPR001721,PFAM:PF00585;Note=thr_dehydrat_c~threonine dehydratase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 30865 31840 . + . ID=id-AFQR01000006.1:30865..31840;Note=superfamily:SSF55021~act-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 31105 31600 . + . ID=id-AFQR01000006.1:31105..31600;Note=Gene3D:3.40.1020.10;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 32205 34043 . - . ID=gene-GGE_0241;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank CDS 32205 34043 . - 0 ID=cds-EGT83113.1;Parent=gene-GGE_0241;Dbxref=GeneID:81336238,InterPro:IPR000581,InterPro:IPR004404,InterPro:IPR015928,InterPro:IPR020558,PFAM:PF00920,TIGRFAM:TIGR00110,NCBI_GP:EGT83113.1;Name=EGT83113.1;Ontology_term=GO:0009082,GO:0008152,GO:0003824,GO:0004160;gbkey=CDS;gene=ilvD;go_function=catalytic activity|0003824||,dihydroxy-acid dehydratase activity|0004160||;go_process=branched chain family amino acid biosynthetic process|0009082||,metabolic process|0008152||;locus_tag=GGE_0241;product=Dihydroxy-acid dehydratase;protein_id=EGT83113.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32205 34026 . - . ID=id-GGE_0241;Dbxref=InterPro:IPR000581;Note=HMMPanther:PTHR21000~family not named~dihydroxy-acid/6-phosphogluconate dehydratase;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32211 34038 . - . ID=id-GGE_0241-2;Note=superfamily%3B label: ILVD_EDD superfamily;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32214 33459 . - . ID=id-GGE_0241-3;Note=superfamily:SSF143975~ilvd/edd n-terminal domain-like;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32217 34017 . - . ID=id-GGE_0241-4;Dbxref=InterPro:IPR004404;Note=HAMAP:MF_00012~ilvd~dihydroxy-acid dehydratase;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32256 33981 . - . ID=id-GGE_0241-5;Dbxref=InterPro:IPR004404,TIGRFAM:TIGR00110;Note=ilvd: dihydroxy-acid dehydratase~dihydroxy-acid dehydratase;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32277 33957 . - . ID=id-GGE_0241-6;Note=multi-dom%3B label: ilvD;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32307 33918 . - . ID=id-GGE_0241-7;Dbxref=InterPro:IPR000581,PFAM:PF00920;Note=ilvd_edd~dihydroxy-acid/6-phosphogluconate dehydratase;gbkey=misc_feature;gene=ilvD;locus_tag=GGE_0241 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32238 32571 . + . ID=id-AFQR01000006.1:32238..32571;Dbxref=InterPro:IPR020558;Note=PatternScan:PS00886~ilvd_edd_1~dihydroxy-acid/6-phosphogluconate dehydratase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32241 33732 . + . ID=id-AFQR01000006.1:32241..33732;Dbxref=InterPro:IPR020558;Note=PatternScan:PS00887~ilvd_edd_2~dihydroxy-acid/6-phosphogluconate dehydratase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 32766 33468 . + . ID=id-AFQR01000006.1:32766..33468;Dbxref=InterPro:IPR015928;Note=superfamily:SSF52016~leud/ilvd-like~aconitase/3-isopropylmalate dehydratase%2C swivel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 34078 34998 . - . ID=gene-GGE_0242;Name=GGE_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank CDS 34078 34998 . - 0 ID=cds-EGT83114.1;Parent=gene-GGE_0242;Dbxref=GeneID:261400948,InterPro:IPR001525,InterPro:IPR018117,PFAM:PF00145,TIGRFAM:TIGR00675,NCBI_GP:EGT83114.1;Name=EGT83114.1;Note=ZP_05987073;Ontology_term=GO:0006306,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA methylation|0006306||;locus_tag=GGE_0242;product=modification methylase EcoRII;protein_id=EGT83114.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34084 34993 . - . ID=id-GGE_0242;Dbxref=InterPro:IPR001525;Note=HMMPanther:PTHR10629:SF11~cytosine-specific methyltransferase~HMMPanther:PTHR10629~cytosine-specific methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34084 34711 . - . ID=id-GGE_0242-2;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34087 34990 . - . ID=id-GGE_0242-3;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34087 34984 . - . ID=id-GGE_0242-4;Dbxref=InterPro:IPR001525,PFAM:PF00145;Note=dna_methylase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34087 34954 . - . ID=id-GGE_0242-5;Note=specific~superfamily~multi-dom%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34090 34129 . - . ID=id-GGE_0242-6;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34093 34972 . - . ID=id-GGE_0242-7;Dbxref=InterPro:IPR001525,TIGRFAM:TIGR00675;Note=dcm: dna (cytosine-5-)-methyltransferase~c-5 cytosine methyltransferase;gbkey=misc_feature;locus_tag=GGE_0242 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34108 34963 . + . ID=id-AFQR01000006.1:34108..34963;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34117 34279 . + . ID=id-AFQR01000006.1:34117..34279;Dbxref=InterPro:IPR018117;Note=PatternScan:PS00094~c5_mtase_1~dna methylase%2C c-5 cytosine-specific%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34120 34534 . + . ID=id-AFQR01000006.1:34120..34534;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 34123 34396 . + . ID=id-AFQR01000006.1:34123..34396;Dbxref=InterPro:IPR001525;Note=FPrintScan:PR00105~c5mettrfrase~c-5 cytosine methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 34995 35885 . - . ID=gene-GGE_0243;Name=GGE_0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0243 GCA_000222085.2|AFQR01000006.1 Genbank CDS 34995 35885 . - 0 ID=cds-EGT83115.1;Parent=gene-GGE_0243;Dbxref=GeneID:319407457,InterPro:IPR011335,InterPro:IPR015109,PFAM:PF09019,NCBI_GP:EGT83115.1;Name=EGT83115.1;Note=CBI81107;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||,Type II site-specific deoxyribonuclease activity|0009036||;go_process=DNA restriction-modification system|0009307||;locus_tag=GGE_0243;product=putative type II restriction endonuclease;protein_id=EGT83115.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35334 35502 . - . ID=id-GGE_0243;Dbxref=InterPro:IPR015109,PFAM:PF09019;Note=ecorii-c~restriction endonuclease%2C type ii%2C ecorii;gbkey=misc_feature;locus_tag=GGE_0243 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35400 35460 . - . ID=id-GGE_0243-2;Dbxref=InterPro:IPR011335;Note=superfamily:SSF52980~restriction endonuclease-like~restriction endonuclease%2C type ii-like;gbkey=misc_feature;locus_tag=GGE_0243 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35367 35406 . + . ID=id-AFQR01000006.1:35367..35406;Note=superfamily%3B label: EcoRII-C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 35886 36104 . - . ID=gene-GGE_0244;Name=GGE_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0244 GCA_000222085.2|AFQR01000006.1 Genbank CDS 35886 36104 . - 0 ID=cds-EGT83116.1;Parent=gene-GGE_0244;Dbxref=GeneID:145632089,NCBI_GP:EGT83116.1;Name=EGT83116.1;Note=ZP_01787824;gbkey=CDS;locus_tag=GGE_0244;product=acetohydroxy acid synthase II;protein_id=EGT83116.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35886 36099 . - . ID=id-GGE_0244;Note=superfamily%3B label: ACT superfamily;gbkey=misc_feature;locus_tag=GGE_0244 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35892 36084 . - . ID=id-GGE_0244-2;Note=Gene3D:3.30.70.260;gbkey=misc_feature;locus_tag=GGE_0244 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35895 36096 . - . ID=id-GGE_0244-3;Note=superfamily:SSF55021~act-like;gbkey=misc_feature;locus_tag=GGE_0244 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 35922 36069 . - . ID=id-GGE_0244-4;Note=BlastProDom:PD002844~ilvh_metth_o27492;gbkey=misc_feature;locus_tag=GGE_0244 GCA_000222085.2|AFQR01000006.1 Genbank gene 36104 37762 . - . ID=gene-GGE_0245;Name=GGE_0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank CDS 36104 37762 . - 0 ID=cds-EGT83117.1;Parent=gene-GGE_0245;Dbxref=GeneID:325576864,InterPro:IPR000175,InterPro:IPR000399,InterPro:IPR000581,InterPro:IPR000634,InterPro:IPR001721,InterPro:IPR001761,InterPro:IPR001851,InterPro:IPR001926,InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR003439,InterPro:IPR003798,InterPro:IPR004013,InterPro:IPR004365,InterPro:IPR004404,InterPro:IPR004805,InterPro:IPR005787,InterPro:IPR007721,InterPro:IPR011611,InterPro:IPR011708,InterPro:IPR011766,InterPro:IPR011877,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,InterPro:IPR015861,InterPro:IPR015928,InterPro:IPR016195,InterPro:IPR017871,InterPro:IPR020558,PFAM:PF00005,PFAM:PF00205,PFAM:PF00209,PFAM:PF00291,PFAM:PF00294,PFAM:PF00532,PFAM:PF00585,PFAM:PF00920,PFAM:PF01336,PFAM:PF02646,PFAM:PF02653,PFAM:PF02775,PFAM:PF02776,PFAM:PF02811,PFAM:PF05025,PFAM:PF07733,TIGRFAM:TIGR00110,TIGRFAM:TIGR00118,TIGRFAM:TIGR00594,TIGRFAM:TIGR01124,TIGRFAM:TIGR02152,NCBI_GP:EGT83117.1;Name=EGT83117.1;Note=ZP_08147479;Ontology_term=GO:0006014,GO:0006260,GO:0009082,GO:0008643,GO:0006520,GO:0009097,GO:0008152,GO:0006836,GO:0006810,GO:0005737,GO:0005887,GO:0016020,GO:0008408,GO:0005524,GO:0016887,GO:0004794,GO:0003984,GO:0043211,GO:0003824,GO:0004160,GO:0050660,GO:0000287,GO:0005328,GO:0003676,GO:0016773,GO:0030170,GO:0004747,GO:0030976,GO:0016740,GO:0005215;gbkey=CDS;go_component=cytoplasm|0005737||,integral to plasma membrane|0005887||,membrane|0016020||;go_function=3'-5' exonuclease activity|0008408||,ATP binding|0005524||,ATPase activity|0016887||,L-threonine ammonia-lyase activity|0004794||,acetolactate synthase activity|0003984||,carbohydrate-transporting ATPase activity|0043211||,catalytic activity|0003824||,dihydroxy-acid dehydratase activity|0004160||,flavin adenine dinucleotide binding|0050660||,magnesium ion binding|0000287||,neurotransmitter:sodium symporter activity|0005328||,nucleic acid binding|0003676||,phosphotransferase activity alcohol group as acceptor|0016773||,pyridoxal phosphate binding|0030170||,ribokinase activity|0004747||,thiamine pyrophosphate binding|0030976||,transferase activity|0016740||,transporter activity|0005215||;go_process=D-ribose metabolic process|0006014||,DNA replication|0006260||,branched chain family amino acid biosynthetic process|0009082||,carbohydrate transport|0008643||,cellular amino acid metabolic process|0006520||,isoleucine biosynthetic process|0009097||,metabolic process|0008152||,neurotransmitter transport|0006836||,transport|0006810||;locus_tag=GGE_0245;product=acetolactate synthase;protein_id=EGT83117.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36104 37757 . - . ID=id-GGE_0245;Dbxref=InterPro:IPR012846,TIGRFAM:TIGR00118;Note=multi-dom~acolac_lg: acetolactate synthase%2C large sub~acetolactate synthase%2C large subunit%2C biosynthetic%3B label: PRK08978;gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36104 37754 . - . ID=id-GGE_0245-2;Note=HMMPanther:PTHR18968:SF13~acetolactate synthase~HMMPanther:PTHR18968~family not named;gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36104 36653 . - . ID=id-GGE_0245-3;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36104 36623 . - . ID=id-GGE_0245-4;Note=Gene3D:3.40.50.970;gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36104 36608 . - . ID=id-GGE_0245-5;Dbxref=InterPro:IPR012001,PFAM:PF02776;Note=tpp_enzyme_n~thiamine pyrophosphate enzyme tpp-binding domain;gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36119 36569 . - . ID=id-GGE_0245-6;Note=specific~superfamily%3B label: TPP_enzyme_PYR superfamily;gbkey=misc_feature;locus_tag=GGE_0245 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36161 36650 . + . ID=id-AFQR01000006.1:36161..36650;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36164 37349 . + . ID=id-AFQR01000006.1:36164..37349;Dbxref=InterPro:IPR000399;Note=PatternScan:PS00187~tpp_enzymes~tpp-binding enzyme%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36473 36707 . + . ID=id-AFQR01000006.1:36473..36707;Note=superfamily%3B label: TPP_enzyme_M superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36509 36671 . + . ID=id-AFQR01000006.1:36509..36671;Dbxref=InterPro:IPR012000,PFAM:PF00205;Note=tpp_enzyme_m~thiamine pyrophosphate enzyme%2C central domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36551 37238 . + . ID=id-AFQR01000006.1:36551..37238;Dbxref=InterPro:IPR011766,PFAM:PF02775;Note=tpp_enzyme_c~thiamine pyrophosphate enzyme tpp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36578 36659 . + . ID=id-AFQR01000006.1:36578..36659;Note=Gene3D:3.40.50.1220;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36605 36641 . + . ID=id-AFQR01000006.1:36605..36641;Note=superfamily:SSF52467~dhs-like nad/fad-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36662 37172 . + . ID=id-AFQR01000006.1:36662..37172;Note=specific~superfamily%3B label: TPP_AHAS;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36701 37166 . + . ID=id-AFQR01000006.1:36701..37166;Note=superfamily:SSF52518~thiamin diphosphate-binding fold (thdp-binding);gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 36710 37154 . + . ID=id-AFQR01000006.1:36710..37154;Note=Gene3D:3.40.50.970;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 37212 37221 . + . ID=id-AFQR01000006.1:37212..37221;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 38011 39537 . + . ID=gene-GGE_0246;Name=GGE_0246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank CDS 38011 39537 . + 0 ID=cds-EGT83118.1;Parent=gene-GGE_0246;Dbxref=GeneID:1175298,InterPro:IPR000175,PFAM:PF00209,NCBI_GP:EGT83118.1;Name=EGT83118.1;Note=HI_0736;Ontology_term=GO:0006836,GO:0005887,GO:0016020,GO:0005328;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=neurotransmitter:sodium symporter activity|0005328||;go_process=neurotransmitter transport|0006836||;locus_tag=GGE_0246;product=putative sodium:neurotransmitter symporter;protein_id=EGT83118.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38029 39229 . + . ID=id-GGE_0246;Dbxref=InterPro:IPR000175;Note=HMMPanther:PTHR11616~family not named~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38041 39439 . + . ID=id-GGE_0246-2;Dbxref=InterPro:IPR000175;Note=ProfileScan:PS50267~na_neurotran_symp_3~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38044 39472 . + . ID=id-GGE_0246-3;Note=superfamily%3B label: SNF superfamily;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38044 38362 . + . ID=id-GGE_0246-4;Dbxref=InterPro:IPR000175,PFAM:PF00209;Note=snf~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38068 38077 . + . ID=id-GGE_0246-5;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38071 38071 . + . ID=id-GGE_0246-6;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38401 39109 . + . ID=id-GGE_0246-7;Dbxref=InterPro:IPR000175,PFAM:PF00209;Note=snf~sodium neurotransmitter symporter;gbkey=misc_feature;locus_tag=GGE_0246 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38056 38116 . - . ID=id-AFQR01000006.1:38056..38116;Dbxref=InterPro:IPR000175;Note=PatternScan:PS00610~na_neurotran_symp_1~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38065 39196 . - . ID=id-AFQR01000006.1:38065..39196;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38071 39310 . - . ID=id-AFQR01000006.1:38071..39310;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38071 38968 . - . ID=id-AFQR01000006.1:38071..38968;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38071 38155 . - . ID=id-AFQR01000006.1:38071..38155;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38074 38806 . - . ID=id-AFQR01000006.1:38074..38806;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 39412 . - . ID=id-AFQR01000006.1:38080..39412;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 39100 . - . ID=id-AFQR01000006.1:38080..39100;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38995 . - . ID=id-AFQR01000006.1:38080..38995;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38812 . - . ID=id-AFQR01000006.1:38080..38812;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38707 . - . ID=id-AFQR01000006.1:38080..38707;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38560 . - . ID=id-AFQR01000006.1:38080..38560;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38473 . - . ID=id-AFQR01000006.1:38080..38473;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38287 . - . ID=id-AFQR01000006.1:38080..38287;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38080 38158 . - . ID=id-AFQR01000006.1:38080..38158;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 38092 38287 . - . ID=id-AFQR01000006.1:38092..38287;Dbxref=InterPro:IPR000175;Note=FPrintScan:PR00176~naneusmport~sodium neurotransmitter symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 39539 39634 . + . ID=gene-GGE_0247;Name=GGE_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0247 GCA_000222085.2|AFQR01000006.1 Genbank CDS 39539 39634 . + 0 ID=cds-EGT83119.1;Parent=gene-GGE_0247;Dbxref=GeneID:145628384,NCBI_GP:EGT83119.1;Name=EGT83119.1;Note=ZP_01784185~CGSHi22121_05065;gbkey=CDS;locus_tag=GGE_0247;product=Hypothetical protein;protein_id=EGT83119.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39554 39608 . + . ID=id-GGE_0247;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0247 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39645 39654 . - . ID=id-AFQR01000006.1:39645..39654;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 39907 42147 . - . ID=gene-GGE_0248;Name=GGE_0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0248 GCA_000222085.2|AFQR01000006.1 Genbank CDS 39907 42147 . - 0 ID=cds-EGT83120.1;Parent=gene-GGE_0248;Dbxref=GeneID:301154661,InterPro:IPR000883,PFAM:PF00115,NCBI_GP:EGT83120.1;Name=EGT83120.1;Note=CBW14123;Ontology_term=GO:0009060,GO:0016021,GO:0009055,GO:0020037,GO:0005506;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||;go_process=aerobic respiration|0009060||;locus_tag=GGE_0248;product=putative quinol dependent nitric oxide reductase;protein_id=EGT83120.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39916 42133 . - . ID=id-GGE_0248;Note=superfamily%3B label: Heme_Cu_Oxidase_I superfamily;gbkey=misc_feature;locus_tag=GGE_0248 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39928 39976 . - . ID=id-GGE_0248-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0248 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 40729 41323 . - . ID=id-GGE_0248-3;Dbxref=InterPro:IPR000883;Note=superfamily:SSF81442~cytochrome c oxidase subunit i-like~cytochrome c oxidase%2C subunit i;gbkey=misc_feature;locus_tag=GGE_0248 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 40744 41245 . - . ID=id-GGE_0248-4;Dbxref=InterPro:IPR000883,PFAM:PF00115;Note=cox1~cytochrome c oxidase%2C subunit i;gbkey=misc_feature;locus_tag=GGE_0248 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39937 40927 . + . ID=id-AFQR01000006.1:39937..40927;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39961 41470 . + . ID=id-AFQR01000006.1:39961..41470;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39967 42073 . + . ID=id-AFQR01000006.1:39967..42073;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41896 . + . ID=id-AFQR01000006.1:39976..41896;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41791 . + . ID=id-AFQR01000006.1:39976..41791;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41665 . + . ID=id-AFQR01000006.1:39976..41665;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41536 . + . ID=id-AFQR01000006.1:39976..41536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41365 . + . ID=id-AFQR01000006.1:39976..41365;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41239 . + . ID=id-AFQR01000006.1:39976..41239;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41134 . + . ID=id-AFQR01000006.1:39976..41134;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 41008 . + . ID=id-AFQR01000006.1:39976..41008;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 40903 . + . ID=id-AFQR01000006.1:39976..40903;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 40759 . + . ID=id-AFQR01000006.1:39976..40759;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 39976 40591 . + . ID=id-AFQR01000006.1:39976..40591;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 40690 41335 . + . ID=id-AFQR01000006.1:40690..41335;Dbxref=InterPro:IPR000883;Note=HMMPanther:PTHR10422:SF11~nitric oxide reductase subunit b~HMMPanther:PTHR10422~cytochrome c oxidase subunit 1~cytochrome c oxidase%2C subunit i;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 42527 43657 . + . ID=gene-GGE_0249;Name=GGE_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank CDS 42527 43657 . + 0 ID=cds-EGT83121.1;Parent=gene-GGE_0249;Dbxref=GeneID:301156382,InterPro:IPR004852,InterPro:IPR009056,InterPro:IPR011031,PFAM:PF03150,NCBI_GP:EGT83121.1;Name=EGT83121.1;Note=CBW15853;Ontology_term=GO:0055114,GO:0009055,GO:0020037,GO:0005506,GO:0016491;gbkey=CDS;go_function=electron carrier activity|0009055||,heme binding|0020037||,iron ion binding|0005506||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0249;product=Hypothetical protein;protein_id=EGT83121.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42554 43055 . + . ID=id-GGE_0249;Dbxref=InterPro:IPR009056;Note=superfamily:SSF46626~cytochrome c~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42578 43418 . + . ID=id-GGE_0249-2;Note=multi-dom%3B label: MauG;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42602 43064 . + . ID=id-GGE_0249-3;Dbxref=InterPro:IPR004852,PFAM:PF03150;Note=ccp_maug~di-haem cytochrome c peroxidase;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42602 42896 . + . ID=id-GGE_0249-4;Dbxref=InterPro:IPR009056;Note=ProfileScan:PS51007~cytc~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42614 43031 . + . ID=id-GGE_0249-5;Dbxref=InterPro:IPR009056;Note=Gene3D:1.10.760.10~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43052 43106 . + . ID=id-GGE_0249-6;Dbxref=InterPro:IPR009056;Note=superfamily:SSF46626~cytochrome c~cytochrome c domain;gbkey=misc_feature;locus_tag=GGE_0249 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42572 43175 . - . ID=id-AFQR01000006.1:42572..43175;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42572 43049 . - . ID=id-AFQR01000006.1:42572..43049;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42572 42653 . - . ID=id-AFQR01000006.1:42572..42653;Dbxref=InterPro:IPR011031;Note=ProfileScan:PS51008~multiheme_cytc~multihaem cytochrome;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42620 43541 . - . ID=id-AFQR01000006.1:42620..43541;Note=multi-dom%3B label: PRK07562;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 42857 43139 . - . ID=id-AFQR01000006.1:42857..43139;Dbxref=InterPro:IPR004852,PFAM:PF03150;Note=ccp_maug~di-haem cytochrome c peroxidase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43019 43139 . - . ID=id-AFQR01000006.1:43019..43139;Dbxref=InterPro:IPR009056;Note=ProfileScan:PS51007~cytc~cytochrome c domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43046 43118 . - . ID=id-AFQR01000006.1:43046..43118;Dbxref=InterPro:IPR009056;Note=Gene3D:1.10.760.10~cytochrome c domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43103 43112 . - . ID=id-AFQR01000006.1:43103..43112;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 43738 45327 . + . ID=gene-GGE_0250;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank CDS 43738 45327 . + 0 ID=cds-EGT83122.1;Parent=gene-GGE_0250;Dbxref=InterPro:IPR003798,PFAM:PF02646,NCBI_GP:EGT83122.1;Name=EGT83122.1;gbkey=CDS;gene=rmuC;locus_tag=GGE_0250;product=DNA recombination protein rmuC;protein_id=EGT83122.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43753 43795 . + . ID=id-GGE_0250;Note=transmembrane_regions;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43768 43780 . + . ID=id-GGE_0250-2;Note=seg;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43816 44161 . + . ID=id-GGE_0250-3;Note=multi-dom%3B label: SMC_prok_B;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 44089 44977 . + . ID=id-GGE_0250-4;Note=multi-dom%3B label: COG1322;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 44356 44644 . + . ID=id-GGE_0250-5;Note=superfamily%3B label: RmuC superfamily;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 44359 44638 . + . ID=id-GGE_0250-6;Dbxref=InterPro:IPR003798,PFAM:PF02646;Note=rmuc~dna recombination rmuc;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 44743 44752 . + . ID=id-GGE_0250-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rmuC;locus_tag=GGE_0250 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43777 45049 . - . ID=id-AFQR01000006.1:43777..45049;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43780 44242 . - . ID=id-AFQR01000006.1:43780..44242;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43804 44011 . - . ID=id-AFQR01000006.1:43804..44011;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43804 43864 . - . ID=id-AFQR01000006.1:43804..43864;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 43930 44095 . - . ID=id-AFQR01000006.1:43930..44095;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 44178 44187 . - . ID=id-AFQR01000006.1:44178..44187;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 45490 45909 . + . ID=gene-GGE_0251;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=GGE_0251 GCA_000222085.2|AFQR01000006.1 Genbank CDS 45490 45909 . + 0 ID=cds-EGT83123.1;Parent=gene-GGE_0251;Dbxref=GeneID:1172868,InterPro:IPR007721,PFAM:PF05025,NCBI_GP:EGT83123.1;Name=EGT83123.1;Ontology_term=GO:0008643;gbkey=CDS;gene=rbsD;go_process=carbohydrate transport|0008643||;locus_tag=GGE_0251;product=D-ribose pyranase;protein_id=EGT83123.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45490 45907 . + . ID=id-GGE_0251;Dbxref=InterPro:IPR007721,PFAM:PF05025;Note=superfamily~rbsd_fucu~d-ribose pyranase rbsd/l-fucose mutarotase fucu~Gene3D:3.40.1650.10~g3dsa:3.40.1650.10~superfamily:SSF102546~rbsd_fucu~d-ribose pyranase rbsd/l-fucose mutarotase fucu%3B label: RbsD_FucU superfamily;gbkey=misc_feature;gene=rbsD;locus_tag=GGE_0251 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45732 45741 . - . ID=id-AFQR01000006.1:45732..45741;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 45923 47404 . + . ID=gene-GGE_0252;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank CDS 45923 47404 . + 0 ID=cds-EGT83124.1;Parent=gene-GGE_0252;Dbxref=GeneID:1172865,InterPro:IPR003439,InterPro:IPR015861,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT83124.1;Name=EGT83124.1;Ontology_term=GO:0008643,GO:0016020,GO:0005524,GO:0016887,GO:0043211;gbkey=CDS;gene=rbsA;go_component=membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity|0016887||,carbohydrate-transporting ATPase activity|0043211||;go_process=carbohydrate transport|0008643||;locus_tag=GGE_0252;product=Ribose import ATP-binding protein RbsA;protein_id=EGT83124.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45923 47402 . + . ID=id-GGE_0252;Note=multi-dom%3B label: PRK10762;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45923 46619 . + . ID=id-GGE_0252-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45929 46613 . + . ID=id-GGE_0252-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45932 47030 . + . ID=id-GGE_0252-4;Note=HMMPanther:PTHR24220:SF12~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45935 47384 . + . ID=id-GGE_0252-5;Dbxref=InterPro:IPR015861;Note=ProfileScan:PS51254~rbsa~abc transporter%2C ribose import%2C rbsa;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45938 46634 . + . ID=id-GGE_0252-6;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45938 46577 . + . ID=id-GGE_0252-7;Note=specific~superfamily%3B label: ABC_Carb_Monos_I;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46055 46301 . + . ID=id-GGE_0252-8;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46634 46655 . + . ID=id-GGE_0252-9;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46843 46852 . + . ID=id-GGE_0252-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rbsA;locus_tag=GGE_0252 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 45968 47108 . - . ID=id-AFQR01000006.1:45968..47108;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46310 46805 . - . ID=id-AFQR01000006.1:46310..46805;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46580 46685 . - . ID=id-AFQR01000006.1:46580..46685;Note=specific~superfamily%3B label: ABC_Carb_Monos_II;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46628 46676 . - . ID=id-AFQR01000006.1:46628..46676;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 46643 46679 . - . ID=id-AFQR01000006.1:46643..46679;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 47417 48388 . + . ID=gene-GGE_0253;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=GGE_0253 GCA_000222085.2|AFQR01000006.1 Genbank CDS 47417 48388 . + 0 ID=cds-EGT83125.1;Parent=gene-GGE_0253;Dbxref=GeneID:1172867,InterPro:IPR001851,PFAM:PF02653,NCBI_GP:EGT83125.1;Name=EGT83125.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0253;product=Ribose transport system permease protein rbsC;protein_id=EGT83125.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47432 48356 . + . ID=id-GGE_0253;Note=HMMPanther:PTHR10426:SF2~strictosidine synthase-related~HMMPanther:PTHR10426~family not named;gbkey=misc_feature;gene=rbsC;locus_tag=GGE_0253 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47477 47486 . + . ID=id-GGE_0253-2;Note=transmembrane_regions;gbkey=misc_feature;gene=rbsC;locus_tag=GGE_0253 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47546 48221 . + . ID=id-GGE_0253-3;Dbxref=InterPro:IPR001851,PFAM:PF02653;Note=bpd_transp_2~abc transporter%2C permease;gbkey=misc_feature;gene=rbsC;locus_tag=GGE_0253 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47570 48179 . + . ID=id-GGE_0253-4;Note=specific~superfamily%3B label: TM_PBP1_branched-chain-AA_like superfamily;gbkey=misc_feature;gene=rbsC;locus_tag=GGE_0253 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47447 48332 . - . ID=id-AFQR01000006.1:47447..48332;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47465 48074 . - . ID=id-AFQR01000006.1:47465..48074;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47477 47789 . - . ID=id-AFQR01000006.1:47477..47789;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47486 48236 . - . ID=id-AFQR01000006.1:47486..48236;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47486 48074 . - . ID=id-AFQR01000006.1:47486..48074;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47486 47915 . - . ID=id-AFQR01000006.1:47486..47915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47486 47702 . - . ID=id-AFQR01000006.1:47486..47702;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47486 47606 . - . ID=id-AFQR01000006.1:47486..47606;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 47495 47690 . - . ID=id-AFQR01000006.1:47495..47690;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 48408 49286 . + . ID=gene-GGE_0254;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank CDS 48408 49286 . + 0 ID=cds-EGT83126.1;Parent=gene-GGE_0254;Dbxref=GeneID:1172866,InterPro:IPR001761,PFAM:PF00532,NCBI_GP:EGT83126.1;Name=EGT83126.1;gbkey=CDS;gene=rbsB;locus_tag=GGE_0254;product=D-ribose-binding periplasmic protein;protein_id=EGT83126.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48408 49284 . + . ID=id-GGE_0254;Note=multi-dom%3B label: PRK10653;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48480 49209 . + . ID=id-GGE_0254-2;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48483 49026 . + . ID=id-GGE_0254-3;Dbxref=InterPro:IPR001761,PFAM:PF00532;Note=peripla_bp_1~periplasmic binding protein/laci transcriptional regulator;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48486 49203 . + . ID=id-GGE_0254-4;Note=specific~superfamily%3B label: PBP1_ribose_binding;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48486 48756 . + . ID=id-GGE_0254-5;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 48834 48849 . + . ID=id-GGE_0254-6;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=rbsB;locus_tag=GGE_0254 GCA_000222085.2|AFQR01000006.1 Genbank gene 49384 50304 . + . ID=gene-GGE_0255;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank CDS 49384 50304 . + 0 ID=cds-EGT83127.1;Parent=gene-GGE_0255;Dbxref=GeneID:1172869,InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR011877,PFAM:PF00294,TIGRFAM:TIGR02152,NCBI_GP:EGT83127.1;Name=EGT83127.1;Ontology_term=GO:0006014,GO:0016773,GO:0004747;gbkey=CDS;gene=rbsK;go_function=phosphotransferase activity alcohol group as acceptor|0016773||,ribokinase activity|0004747||;go_process=D-ribose metabolic process|0006014||;locus_tag=GGE_0255;product=Ribokinase;protein_id=EGT83127.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49384 50296 . + . ID=id-GGE_0255;Note=HMMPanther:PTHR10584:SF94~ribokinase~HMMPanther:PTHR10584~sugar kinase;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49384 50278 . + . ID=id-GGE_0255-2;Note=superfamily:SSF53613~ribokinase-like;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49384 50248 . + . ID=id-GGE_0255-3;Note=multi-dom%3B label: FruK;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49393 50290 . + . ID=id-GGE_0255-4;Note=Gene3D:3.40.1190.20;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49396 50260 . + . ID=id-GGE_0255-5;Dbxref=InterPro:IPR011611,PFAM:PF00294;Note=pfkb~carbohydrate/purine kinase;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49399 50275 . + . ID=id-GGE_0255-6;Dbxref=InterPro:IPR011877,TIGRFAM:TIGR02152;Note=d_ribokin_bact: ribokinase~ribokinase%2C bacterial;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49399 50257 . + . ID=id-GGE_0255-7;Note=specific~superfamily%3B label: ribokinase;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49405 49450 . + . ID=id-GGE_0255-8;Dbxref=InterPro:IPR002139;Note=FPrintScan:PR00990~ribokinase~ribokinase;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49984 49993 . + . ID=id-GGE_0255-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rbsK;locus_tag=GGE_0255 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49420 50038 . - . ID=id-AFQR01000006.1:49420..50038;Dbxref=InterPro:IPR002139;Note=FPrintScan:PR00990~ribokinase~ribokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49420 49522 . - . ID=id-AFQR01000006.1:49420..49522;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49423 49894 . - . ID=id-AFQR01000006.1:49423..49894;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49426 50125 . - . ID=id-AFQR01000006.1:49426..50125;Dbxref=InterPro:IPR002173;Note=PatternScan:PS00584~pfkb_kinases_2~carbohydrate/puine kinase%2C pfkb%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49426 49702 . - . ID=id-AFQR01000006.1:49426..49702;Dbxref=InterPro:IPR002139;Note=FPrintScan:PR00990~ribokinase~ribokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49432 49906 . - . ID=id-AFQR01000006.1:49432..49906;Dbxref=InterPro:IPR002139;Note=FPrintScan:PR00990~ribokinase~ribokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 49444 49486 . - . ID=id-AFQR01000006.1:49444..49486;Dbxref=InterPro:IPR002139;Note=FPrintScan:PR00990~ribokinase~ribokinase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50302 50311 . + . ID=id-AFQR01000006.1:50302..50311;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 50332 51336 . + . ID=gene-GGE_0256;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank CDS 50332 51336 . + 0 ID=cds-EGT83128.1;Parent=gene-GGE_0256;Dbxref=GeneID:1172870,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,PFAM:PF00356,PFAM:PF00532,NCBI_GP:EGT83128.1;Name=EGT83128.1;Ontology_term=GO:0006355,GO:0005622,GO:0003677,GO:0003700;gbkey=CDS;gene=rbsR;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0256;product=Ribose operon repressor;protein_id=EGT83128.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50332 50506 . + . ID=id-GGE_0256;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50338 50497 . + . ID=id-GGE_0256-2;Dbxref=InterPro:IPR000843;Note=ProfileScan:PS50932~hth_laci_2~transcription regulator hth%2C laci;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50338 50488 . + . ID=id-GGE_0256-3;Note=Gene3D:1.10.260.40;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50341 50470 . + . ID=id-GGE_0256-4;Dbxref=InterPro:IPR000843,PFAM:PF00356;Note=laci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50341 50365 . + . ID=id-GGE_0256-5;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50344 51307 . + . ID=id-GGE_0256-6;Note=multi-dom%3B label: PRK10423;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50344 50389 . + . ID=id-GGE_0256-7;Dbxref=InterPro:IPR000843;Note=PatternScan:PS00356~hth_laci_1~transcription regulator hth%2C laci;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50347 50485 . + . ID=id-GGE_0256-8;Note=specific~superfamily%3B label: HTH_LacI;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50494 50692 . + . ID=id-GGE_0256-9;Note=Gene3D:3.40.50.2300;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50509 51100 . + . ID=id-GGE_0256-10;Dbxref=InterPro:IPR001761,PFAM:PF00532;Note=peripla_bp_1~periplasmic binding protein/laci transcriptional regulator;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50512 51148 . + . ID=id-GGE_0256-11;Note=superfamily:SSF53822~periplasmic binding like protein i;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50515 51133 . + . ID=id-GGE_0256-12;Note=specific~superfamily%3B label: PBP1_PurR;gbkey=misc_feature;gene=rbsR;locus_tag=GGE_0256 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50365 50371 . - . ID=id-AFQR01000006.1:50365..50371;Dbxref=InterPro:IPR000843;Note=FPrintScan:PR00036~hthlaci~transcription regulator hth%2C laci;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 50740 50854 . - . ID=id-AFQR01000006.1:50740..50854;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 51268 51277 . - . ID=id-AFQR01000006.1:51268..51277;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 51446 51997 . + . ID=gene-GGE_0257;Name=GGE_0257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0257 GCA_000222085.2|AFQR01000006.1 Genbank CDS 51446 51997 . + 0 ID=cds-EGT83129.1;Parent=gene-GGE_0257;Dbxref=GeneID:81336488,InterPro:IPR005134,InterPro:IPR020761,PFAM:PF03350,TIGRFAM:TIGR00645,NCBI_GP:EGT83129.1;Name=EGT83129.1;Note=NTHI0635;gbkey=CDS;locus_tag=GGE_0257;product=UPF0114 protein;protein_id=EGT83129.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 51494 51950 . + . ID=id-GGE_0257;Dbxref=InterPro:IPR020761,TIGRFAM:TIGR00645;Note=hi0507~uncharacterised protein family upf0114%2C bacteria;gbkey=misc_feature;locus_tag=GGE_0257 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 51503 51941 . + . ID=id-GGE_0257-2;Note=superfamily%3B label: UPF0114 superfamily;gbkey=misc_feature;locus_tag=GGE_0257 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 51515 51803 . + . ID=id-GGE_0257-3;Dbxref=InterPro:IPR005134,PFAM:PF03350;Note=upf0114~uncharacterised protein family upf0114;gbkey=misc_feature;locus_tag=GGE_0257 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52003 52012 . - . ID=id-AFQR01000006.1:52003..52012;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 52106 53308 . - . ID=gene-GGE_0258;Name=GGE_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank CDS 52106 53308 . - 0 ID=cds-EGT83130.1;Parent=gene-GGE_0258;Dbxref=GeneID:1174834,InterPro:IPR002091,InterPro:IPR002293,InterPro:IPR013059,InterPro:IPR013061,InterPro:IPR018227,PFAM:PF03222,TIGRFAM:TIGR00837,NCBI_GP:EGT83130.1;Name=EGT83130.1;Note=tyrP-A;Ontology_term=GO:0006865,GO:0015801,GO:0055085,GO:0005887,GO:0016020,GO:0015171,GO:0015173;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=amino acid transmembrane transporter activity|0015171||,aromatic amino acid transmembrane transporter activity|0015173||;go_process=amino acid transport|0006865||,aromatic amino acid transport|0015801||,transmembrane transport|0055085||;locus_tag=GGE_0258;product=Tyrosine-specific transport protein 1;protein_id=EGT83130.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52112 53258 . - . ID=id-GGE_0258;Dbxref=InterPro:IPR018227,PFAM:PF03222;Note=trp_tyr_perm~tryptophan/tyrosine permease;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52121 53267 . - . ID=id-GGE_0258-2;Dbxref=InterPro:IPR002293;Note=HMMPanther:PTHR11785:SF133~tryptophan permease~HMMPanther:PTHR11785~family not named~amino acid/polyamine transporter i;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52121 52175 . - . ID=id-GGE_0258-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52124 53231 . - . ID=id-GGE_0258-4;Dbxref=InterPro:IPR013059,TIGRFAM:TIGR00837;Note=araap: aromatic amino acid transport protein~tryptophan/tyrosine transporter;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52124 53192 . - . ID=id-GGE_0258-5;Note=superfamily%3B label: Aa_trans superfamily;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52133 52178 . - . ID=id-GGE_0258-6;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52154 52157 . - . ID=id-GGE_0258-7;Dbxref=InterPro:IPR013061;Note=PatternScan:PS00594~aromatic_aa_permease_1~tryptophan/tryrosine permease%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0258 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52157 53210 . + . ID=id-AFQR01000006.1:52157..53210;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52163 53042 . + . ID=id-AFQR01000006.1:52163..53042;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52163 52535 . + . ID=id-AFQR01000006.1:52163..52535;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 53105 . + . ID=id-AFQR01000006.1:52166..53105;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 52937 . + . ID=id-AFQR01000006.1:52166..52937;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 52754 . + . ID=id-AFQR01000006.1:52166..52754;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 52634 . + . ID=id-AFQR01000006.1:52166..52634;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 52457 . + . ID=id-AFQR01000006.1:52166..52457;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52166 52214 . + . ID=id-AFQR01000006.1:52166..52214;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52169 52535 . + . ID=id-AFQR01000006.1:52169..52535;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52169 52349 . + . ID=id-AFQR01000006.1:52169..52349;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 53204 . + . ID=id-AFQR01000006.1:52175..53204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 53099 . + . ID=id-AFQR01000006.1:52175..53099;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 53015 . + . ID=id-AFQR01000006.1:52175..53015;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 52910 . + . ID=id-AFQR01000006.1:52175..52910;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 52730 . + . ID=id-AFQR01000006.1:52175..52730;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 52637 . + . ID=id-AFQR01000006.1:52175..52637;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 52346 . + . ID=id-AFQR01000006.1:52175..52346;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52175 52202 . + . ID=id-AFQR01000006.1:52175..52202;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 52181 52193 . + . ID=id-AFQR01000006.1:52181..52193;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53403 53412 . - . ID=id-AFQR01000006.1:53403..53412;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 53490 54353 . + . ID=gene-GGE_0259;Name=GGE_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0259 GCA_000222085.2|AFQR01000006.1 Genbank CDS 53490 54353 . + 0 ID=cds-EGT83131.1;Parent=gene-GGE_0259;Dbxref=GeneID:1176307,InterPro:IPR005229,InterPro:IPR013527,InterPro:IPR013551,PFAM:PF03755,PFAM:PF08340,TIGRFAM:TIGR00255,NCBI_GP:EGT83131.1;Name=EGT83131.1;Note=HI_0467;gbkey=CDS;locus_tag=GGE_0259;product=UPF0701 protein;protein_id=EGT83131.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53490 54351 . + . ID=id-GGE_0259;Dbxref=InterPro:IPR005229,TIGRFAM:TIGR00255;Note=multi-dom~tigr00255: conserved hypothetical protein t~conserved hypothetical protein chp00255%3B label: PRK11820;gbkey=misc_feature;locus_tag=GGE_0259 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53496 53952 . + . ID=id-GGE_0259-2;Note=superfamily%3B label: YicC_N superfamily;gbkey=misc_feature;locus_tag=GGE_0259 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53496 53949 . + . ID=id-GGE_0259-3;Dbxref=InterPro:IPR013527,PFAM:PF03755;Note=yicc_n~yicc-like;gbkey=misc_feature;locus_tag=GGE_0259 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53993 54002 . + . ID=id-GGE_0259-4;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0259 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53526 53715 . - . ID=id-AFQR01000006.1:53526..53715;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53529 53877 . - . ID=id-AFQR01000006.1:53529..53877;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 53748 54096 . - . ID=id-AFQR01000006.1:53748..54096;Dbxref=InterPro:IPR013551,PFAM:PF08340;Note=superfamily~duf1732~domain of unknown function duf1732%3B label: DUF1732 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 54363 55205 . + . ID=gene-GGE_0260;Name=GGE_0260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0260 GCA_000222085.2|AFQR01000006.1 Genbank CDS 54363 55205 . + 0 ID=cds-EGT83132.1;Parent=gene-GGE_0260;Dbxref=GeneID:1175250,InterPro:IPR006222,InterPro:IPR017703,PFAM:PF01571,TIGRFAM:TIGR03317,NCBI_GP:EGT83132.1;Name=EGT83132.1;Note=HI_0466;Ontology_term=GO:0006546,GO:0005737,GO:0004047;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=aminomethyltransferase activity|0004047||;go_process=glycine catabolic process|0006546||;locus_tag=GGE_0260;product=putative folate-binding%2C YgfZ;protein_id=EGT83132.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54363 55203 . + . ID=id-GGE_0260;Note=multi-dom%3B label: COG0354;gbkey=misc_feature;locus_tag=GGE_0260 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54375 54948 . + . ID=id-GGE_0260-2;Note=superfamily:SSF103025~folate-binding domain;gbkey=misc_feature;locus_tag=GGE_0260 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54384 54684 . + . ID=id-GGE_0260-3;Dbxref=InterPro:IPR006222,PFAM:PF01571;Note=gcv_t~glycine cleavage t-protein;gbkey=misc_feature;locus_tag=GGE_0260 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54396 55101 . + . ID=id-GGE_0260-4;Note=HMMPanther:PTHR22602~family not named;gbkey=misc_feature;locus_tag=GGE_0260 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54534 54909 . - . ID=id-AFQR01000006.1:54534..54909;Note=superfamily%3B label: GCV_T_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54558 54792 . - . ID=id-AFQR01000006.1:54558..54792;Note=superfamily%3B label: ygfZ_signature superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54567 54786 . - . ID=id-AFQR01000006.1:54567..54786;Dbxref=InterPro:IPR017703,TIGRFAM:TIGR03317;Note=ygfz_signature: folate-binding protein~folate-binding%2C ygfz;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 54606 54960 . - . ID=id-AFQR01000006.1:54606..54960;Note=superfamily:SSF101790~aminomethyltransferase beta-barrel domain;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 55236 56123 . - . ID=gene-GGE_0261;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank CDS 55236 56123 . - 0 ID=cds-EGT83133.1;Parent=gene-GGE_0261;Dbxref=GeneID:166918886,InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011931,InterPro:IPR013762,InterPro:IPR023009,InterPro:IPR023109,PFAM:PF00589,PFAM:PF02899,TIGRFAM:TIGR02224,NCBI_GP:EGT83133.1;Name=EGT83133.1;Ontology_term=GO:0015074,GO:0006310,GO:0007049,GO:0051301,GO:0007059,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||;go_process=DNA integration|0015074||,DNA recombination|0006310||,cell cycle|0007049||,cell division|0051301||,chromosome segregation|0007059||;locus_tag=GGE_0261;product=Tyrosine recombinase xerC;protein_id=EGT83133.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55236 56118 . - . ID=id-GGE_0261;Note=multi-dom%3B label: XerC;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55236 56109 . - . ID=id-GGE_0261-2;Dbxref=InterPro:IPR023009;Note=HAMAP:MF_01808~recomb_xerc~tyrosine recombinase xerc/xerd;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55245 55524 . - . ID=id-GGE_0261-3;Dbxref=InterPro:IPR010998;Note=superfamily:SSF47823~lambda integrase-like domain~integrase%2C lambda-type;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55248 55521 . - . ID=id-GGE_0261-4;Dbxref=InterPro:IPR023109;Note=Gene3D:1.10.150.130~integrase/recombinase;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55251 56076 . - . ID=id-GGE_0261-5;Note=specific~superfamily%3B label: DNA_BRE_C superfamily;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55251 55488 . - . ID=id-GGE_0261-6;Dbxref=InterPro:IPR004107,PFAM:PF02899;Note=phage_integr_n~integrase sam-like%2C phage;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55254 56100 . - . ID=id-GGE_0261-7;Dbxref=InterPro:IPR011931,TIGRFAM:TIGR02224;Note=recomb_xerc: tyrosine recombinase xerc~tyrosine recombinase xerc;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55548 55794 . - . ID=id-GGE_0261-8;Dbxref=InterPro:IPR011010;Note=superfamily:SSF56349~dna breaking-rejoining enzyme~dna breaking-rejoining enzyme%2C catalytic core;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55566 55746 . - . ID=id-GGE_0261-9;Dbxref=InterPro:IPR002104,PFAM:PF00589;Note=phage_integrase~integrase%2C catalytic core%2C phage;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55578 55749 . - . ID=id-GGE_0261-10;Dbxref=InterPro:IPR013762;Note=Gene3D:1.10.443.10~integrase-like%2C catalytic core%2C phage;gbkey=misc_feature;gene=xerC;locus_tag=GGE_0261 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 55284 55443 . + . ID=id-AFQR01000006.1:55284..55443;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 56123 56557 . - . ID=gene-GGE_0262;Name=GGE_0262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0262 GCA_000222085.2|AFQR01000006.1 Genbank CDS 56123 56557 . - 0 ID=cds-EGT83134.1;Parent=gene-GGE_0262;Dbxref=GeneID:1175287,InterPro:IPR000182,InterPro:IPR016181,NCBI_GP:EGT83134.1;Name=EGT83134.1;Note=HI_0677;Ontology_term=GO:0008152,GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||;go_process=metabolic process|0008152||;locus_tag=GGE_0262;product=putative acetyltransferase;protein_id=EGT83134.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56123 56555 . - . ID=id-GGE_0262;Dbxref=InterPro:IPR000182;Note=ProfileScan:PS51186~gnat~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;locus_tag=GGE_0262 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56123 56519 . - . ID=id-GGE_0262-2;Dbxref=InterPro:IPR016181;Note=superfamily:SSF55729~acyl-coa n-acyltransferases (nat)~acyl-coa n-acyltransferase;gbkey=misc_feature;locus_tag=GGE_0262 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56123 56465 . - . ID=id-GGE_0262-3;Note=HMMPanther:PTHR23091:SF26~probable acetyltransferase~HMMPanther:PTHR23091~family not named;gbkey=misc_feature;locus_tag=GGE_0262 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56129 56441 . - . ID=id-GGE_0262-4;Dbxref=InterPro:IPR016181;Note=Gene3D:3.40.630.30~acyl-coa n-acyltransferase;gbkey=misc_feature;locus_tag=GGE_0262 GCA_000222085.2|AFQR01000006.1 Genbank gene 56666 57514 . + . ID=gene-GGE_0263;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank CDS 56666 57514 . + 0 ID=cds-EGT83135.1;Parent=gene-GGE_0263;Dbxref=GeneID:160187448,InterPro:IPR000652,InterPro:IPR013785,InterPro:IPR020861,PFAM:PF00121,TIGRFAM:TIGR00419,NCBI_GP:EGT83135.1;Name=EGT83135.1;Ontology_term=GO:0008152,GO:0003824,GO:0004807;gbkey=CDS;gene=tpiA;go_function=catalytic activity|0003824||,triose-phosphate isomerase activity|0004807||;go_process=metabolic process|0008152||;locus_tag=GGE_0263;product=Triosephosphate isomerase;protein_id=EGT83135.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56726 57452 . + . ID=id-GGE_0263;Dbxref=InterPro:IPR000652;Note=superfamily:SSF51351~triosephosphate isomerase (tim)~triosephosphate isomerase;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56726 57449 . + . ID=id-GGE_0263-2;Dbxref=InterPro:IPR000652;Note=HMMPanther:PTHR21139~family not named~triosephosphate isomerase;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56732 57431 . + . ID=id-GGE_0263-3;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56735 57428 . + . ID=id-GGE_0263-4;Dbxref=InterPro:IPR000652;Note=ProfileScan:PS51440~tim_2~triosephosphate isomerase;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56738 57416 . + . ID=id-GGE_0263-5;Dbxref=InterPro:IPR000652,PFAM:PF00121;Note=tim~triosephosphate isomerase;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56738 57392 . + . ID=id-GGE_0263-6;Note=specific~superfamily%3B label: TIM;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56741 57398 . + . ID=id-GGE_0263-7;Dbxref=InterPro:IPR000652,TIGRFAM:TIGR00419;Note=tim: triose-phosphate isomerase~triosephosphate isomerase;gbkey=misc_feature;gene=tpiA;locus_tag=GGE_0263 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56699 57245 . - . ID=id-AFQR01000006.1:56699..57245;Dbxref=InterPro:IPR020861;Note=PatternScan:PS00171~tim_1~triosephosphate isomerase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56699 56891 . - . ID=id-AFQR01000006.1:56699..56891;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 56714 57464 . - . ID=id-AFQR01000006.1:56714..57464;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57528 57537 . + . ID=id-AFQR01000006.1:57528..57537;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 57875 61015 . - . ID=gene-GGE_0264;Name=GGE_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0264 GCA_000222085.2|AFQR01000006.1 Genbank CDS 57875 61015 . - 0 ID=cds-EGT83136.1;Parent=gene-GGE_0264;Dbxref=GeneID:145639383,InterPro:IPR000531,InterPro:IPR010917,InterPro:IPR010949,InterPro:IPR012910,PFAM:PF00593,PFAM:PF07715,TIGRFAM:TIGR01786,NCBI_GP:EGT83136.1;Name=EGT83136.1;Note=ZP_01794988;Ontology_term=GO:0006810,GO:0016020,GO:0019867,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||,outer membrane|0019867||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0264;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT83136.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57950 58307 . - . ID=id-GGE_0264;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0264 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57974 60917 . - . ID=id-GGE_0264-2;Dbxref=InterPro:IPR010949,TIGRFAM:TIGR01786;Note=superfamily:SSF56935~porins~tonb-hemlactrns: tonb-dependent hemog~tonb-dependent haemoglobin/transferrin/lactoferrin receptor;gbkey=misc_feature;locus_tag=GGE_0264 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 58037 58208 . - . ID=id-GGE_0264-3;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0264 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 58040 58757 . - . ID=id-GGE_0264-4;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0264 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57911 58976 . + . ID=id-AFQR01000006.1:57911..58976;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57917 60086 . + . ID=id-AFQR01000006.1:57917..60086;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57929 60962 . + . ID=id-AFQR01000006.1:57929..60962;Dbxref=InterPro:IPR010917;Note=PatternScan:PS01156~tonb_dependent_rec_2~tonb-dependent receptor%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 57929 58325 . + . ID=id-AFQR01000006.1:57929..58325;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 58733 60152 . + . ID=id-AFQR01000006.1:58733..60152;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 58841 60050 . + . ID=id-AFQR01000006.1:58841..60050;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 59021 59870 . + . ID=id-AFQR01000006.1:59021..59870;Note=specific~superfamily%3B label: ligand_gated_channel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 61120 63723 . - . ID=gene-GGE_0265;Name=GGE_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0265 GCA_000222085.2|AFQR01000006.1 Genbank CDS 61120 63723 . - 0 ID=cds-EGT83137.1;Parent=gene-GGE_0265;Dbxref=InterPro:IPR000531,InterPro:IPR010917,PFAM:PF00593,NCBI_GP:EGT83137.1;Name=EGT83137.1;Note=Hypothetical tonB-dependent receptor%2C beta-barrel;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0265;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT83137.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 61120 63721 . - . ID=id-GGE_0265;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0265 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 61120 61810 . - . ID=id-GGE_0265-2;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0265 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 62050 62794 . - . ID=id-GGE_0265-3;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0265 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 61174 63670 . + . ID=id-AFQR01000006.1:61174..63670;Dbxref=InterPro:IPR010917;Note=PatternScan:PS01156~tonb_dependent_rec_2~tonb-dependent receptor%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 62119 62719 . + . ID=id-AFQR01000006.1:62119..62719;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 62149 62695 . + . ID=id-AFQR01000006.1:62149..62695;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 63850 64209 . - . ID=gene-GGE_0266;Name=GGE_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0266 GCA_000222085.2|AFQR01000006.1 Genbank CDS 63850 64209 . - 0 ID=cds-EGT83138.1;Parent=gene-GGE_0266;Dbxref=InterPro:IPR012910,PFAM:PF07715,NCBI_GP:EGT83138.1;Name=EGT83138.1;Note=Hypothetical tonB-dependent receptor%2C plug;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0266;product=putative tonB-dependent receptor%2C plug;protein_id=EGT83138.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 63850 64198 . - . ID=id-GGE_0266;Note=multi-dom%3B label: FepA;gbkey=misc_feature;locus_tag=GGE_0266 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 63919 64126 . - . ID=id-GGE_0266-2;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0266 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 63931 64114 . - . ID=id-GGE_0266-3;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0266 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64015 64033 . - . ID=id-GGE_0266-4;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0266 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64021 64024 . + . ID=id-AFQR01000006.1:64021..64024;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 64462 66207 . + . ID=gene-GGE_0267;Name=GGE_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank CDS 64462 66207 . + 0 ID=cds-EGT83139.1;Parent=gene-GGE_0267;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,NCBI_GP:EGT83139.1;Name=EGT83139.1;Note=HI_0663;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0267;product=putative aBC transporter-like protein;protein_id=EGT83139.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64462 65413 . + . ID=id-GGE_0267;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64474 65404 . + . ID=id-GGE_0267-2;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64477 66187 . + . ID=id-GGE_0267-3;Note=HMMPanther:PTHR24221:SF91~subfamily not named~HMMPanther:PTHR24221~family not named;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64513 66127 . + . ID=id-GGE_0267-4;Note=multi-dom%3B label: CydD;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64522 64531 . + . ID=id-GGE_0267-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64525 65254 . + . ID=id-GGE_0267-6;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=abc_membrane~abc transporter%2C transmembrane domain;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64543 65290 . + . ID=id-GGE_0267-7;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64543 65254 . + . ID=id-GGE_0267-8;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 65425 65434 . + . ID=id-GGE_0267-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0267 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64489 65896 . - . ID=id-AFQR01000006.1:64489..65896;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64507 65986 . - . ID=id-AFQR01000006.1:64507..65986;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64507 65875 . - . ID=id-AFQR01000006.1:64507..65875;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64516 64876 . - . ID=id-AFQR01000006.1:64516..64876;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64522 65026 . - . ID=id-AFQR01000006.1:64522..65026;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64531 65275 . - . ID=id-AFQR01000006.1:64531..65275;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64531 65194 . - . ID=id-AFQR01000006.1:64531..65194;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64531 64939 . - . ID=id-AFQR01000006.1:64531..64939;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64531 64618 . - . ID=id-AFQR01000006.1:64531..64618;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 64837 65587 . - . ID=id-AFQR01000006.1:64837..65587;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 65140 65467 . - . ID=id-AFQR01000006.1:65140..65467;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 65164 65467 . - . ID=id-AFQR01000006.1:65164..65467;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 65167 65467 . - . ID=id-AFQR01000006.1:65167..65467;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 65176 65458 . - . ID=id-AFQR01000006.1:65176..65458;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank gene 66200 67858 . + . ID=gene-GGE_0268;Name=GGE_0268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank CDS 66200 67858 . + 0 ID=cds-EGT83140.1;Parent=gene-GGE_0268;Dbxref=GeneID:2492567,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR011527,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,NCBI_GP:EGT83140.1;Name=EGT83140.1;Note=HI_0664;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0268;product=Putative ABC transporter ATP-binding protein;protein_id=EGT83140.1;transl_table=11 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66206 67850 . + . ID=id-GGE_0268;Note=HMMPanther:PTHR24221:SF91~subfamily not named~HMMPanther:PTHR24221~family not named;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66233 67823 . + . ID=id-GGE_0268-2;Note=multi-dom%3B label: MdlB;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66236 67136 . + . ID=id-GGE_0268-3;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66254 67118 . + . ID=id-GGE_0268-4;Note=Gene3D:1.20.1560.10;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66263 66269 . + . ID=id-GGE_0268-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66272 67052 . + . ID=id-GGE_0268-6;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66290 66986 . + . ID=id-GGE_0268-7;Dbxref=InterPro:IPR001140,PFAM:PF00664;Note=abc_membrane~abc transporter%2C transmembrane domain;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66299 66980 . + . ID=id-GGE_0268-8;Note=superfamily%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 67184 67193 . + . ID=id-GGE_0268-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0268 GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66227 67094 . - . ID=id-AFQR01000006.1:66227..67094;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66236 67322 . - . ID=id-AFQR01000006.1:66236..67322;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66260 66374 . - . ID=id-AFQR01000006.1:66260..66374;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66269 67028 . - . ID=id-AFQR01000006.1:66269..67028;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66269 66950 . - . ID=id-AFQR01000006.1:66269..66950;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66269 66677 . - . ID=id-AFQR01000006.1:66269..66677;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66269 66599 . - . ID=id-AFQR01000006.1:66269..66599;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66578 67337 . - . ID=id-AFQR01000006.1:66578..67337;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66836 67220 . - . ID=id-AFQR01000006.1:66836..67220;Note=superfamily~Gene3D:3.40.50.300~superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase%3B label: P-loop NTPase superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000006.1 Genbank sequence_feature 66839 67220 . - . ID=id-AFQR01000006.1:66839..67220;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature ##sequence-region AFQR01000005.1 1 26121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000005.1 Genbank region 1 26121 . + . ID=AFQR01000005.1:1..26121;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000005.1 Genbank gene 1007 1711 . + . ID=gene-GGE_0186;Name=GGE_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank CDS 1007 1711 . + 0 ID=cds-EGT83141.1;Parent=gene-GGE_0186;Dbxref=GeneID:325576580,InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT83141.1;Name=EGT83141.1;Note=ZP_08147298;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0186;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;protein_id=EGT83141.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1007 1586 . + . ID=id-GGE_0186;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1007 1577 . + . ID=id-GGE_0186-2;Note=Gene3D:3.40.50.300~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1007 1571 . + . ID=id-GGE_0186-3;Note=multi-dom%3B label: SalX;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1013 1652 . + . ID=id-GGE_0186-4;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1013 1580 . + . ID=id-GGE_0186-5;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1130 1322 . + . ID=id-GGE_0186-6;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0186 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1052 1361 . - . ID=id-AFQR01000005.1:1052..1361;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1067 1643 . - . ID=id-AFQR01000005.1:1067..1643;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 1708 2433 . + . ID=gene-GGE_0187;Name=GGE_0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank CDS 1708 2433 . + 0 ID=cds-EGT83142.1;Parent=gene-GGE_0187;Dbxref=GeneID:301155785,InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT83142.1;Name=EGT83142.1;Note=CBW15253;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0187;product=Hypothetical protein;protein_id=EGT83142.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1708 2413 . + . ID=id-GGE_0187;Note=superfamily%3B label: TM_PBP2 superfamily;gbkey=misc_feature;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1732 2398 . + . ID=id-GGE_0187-2;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1735 1777 . + . ID=id-GGE_0187-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1870 2251 . + . ID=id-GGE_0187-4;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1912 2218 . + . ID=id-GGE_0187-5;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0187 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1768 2068 . - . ID=id-AFQR01000005.1:1768..2068;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1774 2170 . - . ID=id-AFQR01000005.1:1774..2170;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1777 2359 . - . ID=id-AFQR01000005.1:1777..2359;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1777 1972 . - . ID=id-AFQR01000005.1:1777..1972;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1777 1885 . - . ID=id-AFQR01000005.1:1777..1885;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 1783 1882 . - . ID=id-AFQR01000005.1:1783..1882;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 2459 2710 . + . ID=gene-GGE_0188;Name=GGE_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0188 GCA_000222085.2|AFQR01000005.1 Genbank CDS 2459 2710 . + 0 ID=cds-EGT83143.1;Parent=gene-GGE_0188;Dbxref=InterPro:IPR015168,PFAM:PF09084,NCBI_GP:EGT83143.1;Name=EGT83143.1;Note=Hypothetical periplasmic binding like protein II;gbkey=CDS;locus_tag=GGE_0188;product=putative periplasmic binding like protein II;protein_id=EGT83143.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 2531 2633 . + . ID=id-GGE_0188;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0188 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 2564 2606 . + . ID=id-GGE_0188-2;Dbxref=InterPro:IPR015168,PFAM:PF09084;Note=superfamily~nmt1~nmt1/thi5-like%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0188 GCA_000222085.2|AFQR01000005.1 Genbank gene 2750 3160 . + . ID=gene-GGE_0189;Name=GGE_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0189 GCA_000222085.2|AFQR01000005.1 Genbank CDS 2750 3160 . + 0 ID=cds-EGT83144.1;Parent=gene-GGE_0189;Dbxref=InterPro:IPR015168,PFAM:PF09084,NCBI_GP:EGT83144.1;Name=EGT83144.1;Note=Hypothetical periplasmic binding like protein II;gbkey=CDS;locus_tag=GGE_0189;product=putative periplasmic binding like protein II;protein_id=EGT83144.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 2750 3146 . + . ID=id-GGE_0189;Dbxref=InterPro:IPR015168,PFAM:PF09084;Note=superfamily~nmt1~nmt1/thi5-like%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0189 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 2792 3107 . + . ID=id-GGE_0189-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0189 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 2792 2963 . + . ID=id-GGE_0189-3;Note=Gene3D:3.40.190.10;gbkey=misc_feature;locus_tag=GGE_0189 GCA_000222085.2|AFQR01000005.1 Genbank gene 3411 4061 . + . ID=gene-GGE_0190;Name=GGE_0190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank CDS 3411 4061 . + 0 ID=cds-EGT83145.1;Parent=gene-GGE_0190;Dbxref=InterPro:IPR004305,InterPro:IPR016084,PFAM:PF03070,NCBI_GP:EGT83145.1;Name=EGT83145.1;Note=HI_0358;gbkey=CDS;locus_tag=GGE_0190;product=putative phosphomethylpyrimidine kinase;protein_id=EGT83145.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3411 4056 . + . ID=id-GGE_0190;Note=superfamily%3B label: TENA_THI-4 superfamily;gbkey=misc_feature;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3417 4056 . + . ID=id-GGE_0190-2;Dbxref=InterPro:IPR016084;Note=superfamily:SSF48613~heme oxygenase-like~haem oxygenase-like%2C multi-helical;gbkey=misc_feature;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3417 4050 . + . ID=id-GGE_0190-3;Dbxref=InterPro:IPR016084;Note=Gene3D:1.20.910.10~haem oxygenase-like%2C multi-helical;gbkey=misc_feature;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3423 4044 . + . ID=id-GGE_0190-4;Note=HMMPanther:PTHR20858:SF2~phosphomethylpyrimidine kinase~HMMPanther:PTHR20858~family not named;gbkey=misc_feature;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3435 4029 . + . ID=id-GGE_0190-5;Dbxref=InterPro:IPR004305,PFAM:PF03070;Note=tena_thi-4~tena/thi-4 protein/coenzyme pqq biosynthesis protein c domain;gbkey=misc_feature;locus_tag=GGE_0190 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 3947 3956 . - . ID=id-AFQR01000005.1:3947..3956;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 4077 4871 . + . ID=gene-GGE_0191;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank CDS 4077 4871 . + 0 ID=cds-EGT83146.1;Parent=gene-GGE_0191;Dbxref=InterPro:IPR000417,PFAM:PF02110,PIR:PIRSF000513,TIGRFAM:TIGR00694,NCBI_GP:EGT83146.1;Name=EGT83146.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||;go_process=thiamine biosynthetic process|0009228||;locus_tag=GGE_0191;product=Hydroxyethylthiazole kinase;protein_id=EGT83146.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4077 4869 . + . ID=id-GGE_0191;Dbxref=InterPro:IPR000417,PIR:PIRSF000513;Note=hydroxyethylthiazole kinase~hydroxyethylthiazole kinase;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4092 4857 . + . ID=id-GGE_0191-2;Note=superfamily:SSF53613~ribokinase-like;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4095 4848 . + . ID=id-GGE_0191-3;Note=Gene3D:3.40.1190.20;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4095 4845 . + . ID=id-GGE_0191-4;Dbxref=InterPro:IPR000417;Note=HMMPanther:PTHR20857:SF14~hydroxyethylthiazole kinase~hydroxyethylthiazole kinase~HMMPanther:PTHR20857~family not named;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4095 4830 . + . ID=id-GGE_0191-5;Dbxref=InterPro:IPR000417,TIGRFAM:TIGR00694;Note=thim: hydroxyethylthiazole kinase~hydroxyethylthiazole kinase;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4095 4815 . + . ID=id-GGE_0191-6;Dbxref=InterPro:IPR000417,PFAM:PF02110;Note=hk~hydroxyethylthiazole kinase;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4095 4806 . + . ID=id-GGE_0191-7;Note=specific~superfamily%3B label: ribokinase_pfkB_like superfamily;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4101 4824 . + . ID=id-GGE_0191-8;Dbxref=InterPro:IPR000417;Note=HAMAP:MF_00228~thz_kinase~hydroxyethylthiazole kinase;gbkey=misc_feature;gene=thiM;locus_tag=GGE_0191 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4101 4119 . - . ID=id-AFQR01000005.1:4101..4119;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4104 4251 . - . ID=id-AFQR01000005.1:4104..4251;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4122 4422 . - . ID=id-AFQR01000005.1:4122..4422;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4131 4554 . - . ID=id-AFQR01000005.1:4131..4554;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4131 4329 . - . ID=id-AFQR01000005.1:4131..4329;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4143 4158 . - . ID=id-AFQR01000005.1:4143..4158;Dbxref=InterPro:IPR000417;Note=FPrintScan:PR01099~hyethtzknase~hydroxyethylthiazole kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 4864 5673 . + . ID=gene-GGE_0192;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank CDS 4864 5673 . + 0 ID=cds-EGT83147.1;Parent=gene-GGE_0192;Dbxref=InterPro:IPR000086,InterPro:IPR001387,InterPro:IPR002777,InterPro:IPR004399,InterPro:IPR010744,InterPro:IPR010982,InterPro:IPR012327,InterPro:IPR013749,InterPro:IPR015797,PFAM:PF00293,PFAM:PF01920,PFAM:PF02086,PFAM:PF07022,PFAM:PF08543,PFAM:PF12535,TIGRFAM:TIGR00097,NCBI_GP:EGT83147.1;Name=EGT83147.1;Ontology_term=GO:0006306,GO:0016481,GO:0006457,GO:0009228,GO:0016272,GO:0003677,GO:0016787,GO:0008972,GO:0043565,GO:0009007,GO:0016564,GO:0051082;gbkey=CDS;gene=thiD;go_component=prefoldin complex|0016272||;go_function=DNA binding|0003677||,hydrolase activity|0016787||,phosphomethylpyrimidine kinase activity|0008972||,sequence-specific DNA binding|0043565||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||,transcription repressor activity|0016564||,unfolded protein binding|0051082||;go_process=DNA methylation|0006306||,negative regulation of transcription|0016481||,protein folding|0006457||,thiamine biosynthetic process|0009228||;locus_tag=GGE_0192;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=EGT83147.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4864 5662 . + . ID=id-GGE_0192;Note=multi-dom%3B label: PRK06427;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4864 5653 . + . ID=id-GGE_0192-2;Note=HMMPanther:PTHR20858~family not named;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4876 5659 . + . ID=id-GGE_0192-3;Note=superfamily:SSF53613~ribokinase-like;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4879 5644 . + . ID=id-GGE_0192-4;Note=Gene3D:3.40.1190.20;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4885 5638 . + . ID=id-GGE_0192-5;Dbxref=InterPro:IPR004399,TIGRFAM:TIGR00097;Note=hmp-p_kinase: phosphomethylpyrimidine ki~phosphomethylpyrimidine kinase type-2;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4894 4909 . + . ID=id-GGE_0192-6;Note=seg;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4906 5611 . + . ID=id-GGE_0192-7;Dbxref=InterPro:IPR013749,PFAM:PF08543;Note=phos_pyr_kin~phosphomethylpyrimidine kinase type-1;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 4939 5542 . + . ID=id-GGE_0192-8;Note=specific~superfamily%3B label: HMPP_kinase;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5563 5572 . + . ID=id-GGE_0192-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=thiD;locus_tag=GGE_0192 GCA_000222085.2|AFQR01000005.1 Genbank gene 5684 6364 . + . ID=gene-GGE_0193;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank CDS 5684 6364 . + 0 ID=cds-EGT83148.1;Parent=gene-GGE_0193;Dbxref=InterPro:IPR003733,InterPro:IPR013785,InterPro:IPR022998,PFAM:PF02581,TIGRFAM:TIGR00693,NCBI_GP:EGT83148.1;Name=EGT83148.1;Ontology_term=GO:0008152,GO:0009228,GO:0003824,GO:0004789;gbkey=CDS;gene=thiE;go_function=catalytic activity|0003824||,thiamine-phosphate diphosphorylase activity|0004789||;go_process=metabolic process|0008152||,thiamine biosynthetic process|0009228||;locus_tag=GGE_0193;product=Thiamine-phosphate pyrophosphorylase;protein_id=EGT83148.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5684 6350 . + . ID=id-GGE_0193;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5684 6344 . + . ID=id-GGE_0193-2;Note=HMMPanther:PTHR20857:SF15~thiamine-phosphate pyrophosphorylase~HMMPanther:PTHR20857~family not named;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5705 6323 . + . ID=id-GGE_0193-3;Dbxref=InterPro:IPR022998;Note=superfamily:SSF51391~thiamin phosphate synthase~thiamin phosphate synthase superfamily;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5708 6329 . + . ID=id-GGE_0193-4;Dbxref=InterPro:IPR003733;Note=HAMAP:MF_00097~tmp_ppase~thiamine monophosphate synthase;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5711 6311 . + . ID=id-GGE_0193-5;Dbxref=InterPro:IPR003733,TIGRFAM:TIGR00693;Note=thie: thiamine-phosphate pyrophosphorylase~thiamine monophosphate synthase;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5714 6314 . + . ID=id-GGE_0193-6;Note=specific~superfamily%3B label: TIM_phosphate_binding superfamily;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 5714 6269 . + . ID=id-GGE_0193-7;Dbxref=InterPro:IPR003733,PFAM:PF02581;Note=tmp-teni~thiamine monophosphate synthase;gbkey=misc_feature;gene=thiE;locus_tag=GGE_0193 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 6493 6502 . - . ID=id-AFQR01000005.1:6493..6502;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 6596 7975 . + . ID=gene-GGE_0194;Name=GGE_0194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0194 GCA_000222085.2|AFQR01000005.1 Genbank CDS 6596 7975 . + 0 ID=cds-EGT83149.1;Parent=gene-GGE_0194;Dbxref=GeneID:1176181,InterPro:IPR001539,PFAM:PF01136,NCBI_GP:EGT83149.1;Name=EGT83149.1;Note=HI_0419;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||;go_process=proteolysis|0006508||;locus_tag=GGE_0194;product=putative peptidase U32;protein_id=EGT83149.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 6611 7931 . + . ID=id-GGE_0194;Note=multi-dom%3B label: PRK15452;gbkey=misc_feature;locus_tag=GGE_0194 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 6830 7415 . + . ID=id-GGE_0194-2;Dbxref=InterPro:IPR001539,PFAM:PF01136;Note=superfamily~peptidase_u32~peptidase u32%3B label: Peptidase_U32 superfamily;gbkey=misc_feature;locus_tag=GGE_0194 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 6653 7091 . - . ID=id-AFQR01000005.1:6653..7091;Dbxref=InterPro:IPR001539;Note=PatternScan:PS01276~peptidase_u32~peptidase u32;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 8118 8543 . - . ID=gene-GGE_0195;Name=GGE_0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank CDS 8118 8543 . - 0 ID=cds-EGT83150.1;Parent=gene-GGE_0195;Dbxref=GeneID:1175215,InterPro:IPR005227,InterPro:IPR006641,InterPro:IPR012337,PFAM:PF03652,TIGRFAM:TIGR00250,NCBI_GP:EGT83150.1;Name=EGT83150.1;Note=HI_0305;Ontology_term=GO:0006310,GO:0006281,GO:0006139,GO:0006974,GO:0005737,GO:0016788,GO:0003676;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=hydrolase activity acting on ester bonds|0016788||,nucleic acid binding|0003676||;go_process=DNA recombination|0006310||,DNA repair|0006281||,nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||,response to DNA damage stimulus|0006974||;locus_tag=GGE_0195;product=Putative Holliday junction resolvase;protein_id=EGT83150.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8118 8532 . - . ID=id-GGE_0195;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8118 8523 . - . ID=id-GGE_0195-2;Note=superfamily%3B label: UPF0081 superfamily;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8127 8526 . - . ID=id-GGE_0195-3;Dbxref=InterPro:IPR005227;Note=HAMAP:MF_00651~hjr_yqgf~resolvase%2C holliday junction-type%2C yqgf-like;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8133 8514 . - . ID=id-GGE_0195-4;Dbxref=InterPro:IPR006641;Note=Gene3D:3.30.420.140~yqgf/rnase h-like domain;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8133 8511 . - . ID=id-GGE_0195-5;Dbxref=InterPro:IPR005227,PFAM:PF03652;Note=upf0081~resolvase%2C holliday junction-type%2C yqgf-like;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8136 8508 . - . ID=id-GGE_0195-6;Dbxref=InterPro:IPR005227,TIGRFAM:TIGR00250;Note=rnase_h_yqgf: rnase h-fold protein yqgf~resolvase%2C holliday junction-type%2C yqgf-like;gbkey=misc_feature;locus_tag=GGE_0195 GCA_000222085.2|AFQR01000005.1 Genbank gene 8543 9103 . - . ID=gene-GGE_0196;Name=GGE_0196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank CDS 8543 9103 . - 0 ID=cds-EGT83151.1;Parent=gene-GGE_0196;Dbxref=InterPro:IPR003774,PFAM:PF02622,NCBI_GP:EGT83151.1;Name=EGT83151.1;Note=HI_0304;gbkey=CDS;locus_tag=GGE_0196;product=UPF0301 protein;protein_id=EGT83151.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8543 9101 . - . ID=id-GGE_0196;Note=superfamily:SSF143456~vc0467-like;gbkey=misc_feature;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8543 9098 . - . ID=id-GGE_0196-2;Note=superfamily%3B label: DUF179 superfamily;gbkey=misc_feature;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8549 9098 . - . ID=id-GGE_0196-3;Dbxref=InterPro:IPR003774;Note=HAMAP:MF_00758~upf0301~protein of unknown function duf179;gbkey=misc_feature;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8585 9020 . - . ID=id-GGE_0196-4;Dbxref=InterPro:IPR003774,PFAM:PF02622;Note=duf179~protein of unknown function duf179;gbkey=misc_feature;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8666 8807 . - . ID=id-GGE_0196-5;Note=Gene3D:3.30.70.1300;gbkey=misc_feature;locus_tag=GGE_0196 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8684 8930 . + . ID=id-AFQR01000005.1:8684..8930;Note=Gene3D:3.40.1740.10;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 8912 8921 . + . ID=id-AFQR01000005.1:8912..8921;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 9100 9837 . - . ID=gene-GGE_0197;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank CDS 9100 9837 . - 0 ID=cds-EGT83152.1;Parent=gene-GGE_0197;Dbxref=GeneID:1176097,InterPro:IPR006700,InterPro:IPR015947,PFAM:PF04452,TIGRFAM:TIGR00046,NCBI_GP:EGT83152.1;Name=EGT83152.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||;go_process=rRNA processing|0006364||;locus_tag=GGE_0197;product=Ribosomal RNA small subunit methyltransferase E;protein_id=EGT83152.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9100 9832 . - . ID=id-GGE_0197;Dbxref=InterPro:IPR006700,TIGRFAM:TIGR00046;Note=Gene3D:3.40.1280.10~tigr00046: rna methyltransferase%2C rsme fami~ribosomal rna small subunit methyltransferase e;gbkey=misc_feature;gene=rsmE;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9106 9826 . - . ID=id-GGE_0197-2;Note=superfamily%3B label: Methyltrans_RNA superfamily;gbkey=misc_feature;gene=rsmE;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9106 9316 . - . ID=id-GGE_0197-3;Dbxref=InterPro:IPR015947;Note=superfamily:SSF88697~pua domain-like~pseudouridine synthase/archaeosine transglycosylase-like;gbkey=misc_feature;gene=rsmE;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9157 9757 . - . ID=id-GGE_0197-4;Dbxref=InterPro:IPR006700,PFAM:PF04452;Note=methyltrans_rna~ribosomal rna small subunit methyltransferase e;gbkey=misc_feature;gene=rsmE;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9322 9613 . - . ID=id-GGE_0197-5;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;gene=rsmE;locus_tag=GGE_0197 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9877 9886 . - . ID=id-AFQR01000005.1:9877..9886;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 9899 10624 . - . ID=gene-GGE_0198;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank CDS 9899 10624 . - 0 ID=cds-EGT83153.1;Parent=gene-GGE_0198;Dbxref=GeneID:1169604,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011991,InterPro:IPR014178,PFAM:PF00392,PFAM:PF07840,TIGRFAM:TIGR02812,NCBI_GP:EGT83153.1;Name=EGT83153.1;Ontology_term=GO:0019217,GO:0006355,GO:0005622,GO:0003677,GO:0000062,GO:0003700;gbkey=CDS;gene=fadR;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,acyl-CoA binding|0000062||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of fatty acid metabolic process|0019217||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0198;product=Fatty acid metabolism regulator protein;protein_id=EGT83153.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9899 10622 . - . ID=id-GGE_0198;Dbxref=InterPro:IPR014178;Note=HAMAP:MF_00696~hth_fadr~fatty acid response transcription factor fadr;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9920 10604 . - . ID=id-GGE_0198-2;Dbxref=InterPro:IPR014178,TIGRFAM:TIGR02812;Note=multi-dom~fadr_gamma: fatty acid metabolism transcri~fatty acid response transcription factor fadr%3B label: fadR_gamma;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9929 10121 . - . ID=id-GGE_0198-3;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9932 10109 . - . ID=id-GGE_0198-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9932 10106 . - . ID=id-GGE_0198-5;Dbxref=InterPro:IPR000524;Note=ProfileScan:PS50949~hth_gntr~transcription regulator hth%2C gntr;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9950 10079 . - . ID=id-GGE_0198-6;Dbxref=InterPro:IPR000524,PFAM:PF00392;Note=gntr~transcription regulator hth%2C gntr;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9956 10271 . - . ID=id-GGE_0198-7;Note=HMMPanther:PTHR11751:SF20~aminotransferase related~HMMPanther:PTHR11751~family not named;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9956 10076 . - . ID=id-GGE_0198-8;Note=specific~superfamily%3B label: WHTH_GntR;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10130 10391 . - . ID=id-GGE_0198-9;Note=superfamily%3B label: FCD superfamily;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10130 10388 . - . ID=id-GGE_0198-10;Dbxref=InterPro:IPR008920,PFAM:PF07840;Note=fadr_c~fatty acid responsive transcription factor fadr;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10151 10355 . - . ID=id-GGE_0198-11;Dbxref=InterPro:IPR008920;Note=superfamily:SSF48008~fatty acid responsive transcription factor fadr domain~fatty acid responsive transcription factor fadr;gbkey=misc_feature;gene=fadR;locus_tag=GGE_0198 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9944 10007 . + . ID=id-AFQR01000005.1:9944..10007;Dbxref=InterPro:IPR000524;Note=FPrintScan:PR00035~hthgntr~transcription regulator hth%2C gntr;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 9950 10049 . + . ID=id-AFQR01000005.1:9950..10049;Dbxref=InterPro:IPR000524;Note=FPrintScan:PR00035~hthgntr~transcription regulator hth%2C gntr;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10217 10286 . + . ID=id-AFQR01000005.1:10217..10286;Note=Gene3D:1.20.120.530;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 10736 12292 . + . ID=gene-GGE_0199;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank CDS 10736 12292 . + 0 ID=cds-EGT83154.1;Parent=gene-GGE_0199;Dbxref=GeneID:189029589,InterPro:IPR004671,PFAM:PF06450,TIGRFAM:TIGR00774,NCBI_GP:EGT83154.1;Name=EGT83154.1;Ontology_term=GO:0006814,GO:0016021,GO:0015385;gbkey=CDS;gene=nhaB;go_component=integral to membrane|0016021||;go_function=sodium:hydrogen antiporter activity|0015385||;go_process=sodium ion transport|0006814||;locus_tag=GGE_0199;product=Na+/H+ antiporter nhaB;protein_id=EGT83154.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10736 12290 . + . ID=id-GGE_0199;Dbxref=InterPro:IPR004671,TIGRFAM:TIGR00774;Note=nhab: na+/h+ antiporter nhab~na+/h+ antiporter nhab;gbkey=misc_feature;gene=nhaB;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10742 12287 . + . ID=id-GGE_0199-2;Dbxref=InterPro:IPR004671;Note=HAMAP:MF_01599~nhab~na+/h+ antiporter nhab;gbkey=misc_feature;gene=nhaB;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10748 12272 . + . ID=id-GGE_0199-3;Note=superfamily%3B label: NhaB superfamily;gbkey=misc_feature;gene=nhaB;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10748 12260 . + . ID=id-GGE_0199-4;Note=HMMPanther:PTHR10283:SF60~na(+)/h(+) antiporter~HMMPanther:PTHR10283~solute carrier family 13 member;gbkey=misc_feature;gene=nhaB;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10751 12272 . + . ID=id-GGE_0199-5;Dbxref=InterPro:IPR004671,PFAM:PF06450;Note=nhab~na+/h+ antiporter nhab;gbkey=misc_feature;gene=nhaB;locus_tag=GGE_0199 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10772 11660 . - . ID=id-AFQR01000005.1:10772..11660;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10772 10946 . - . ID=id-AFQR01000005.1:10772..10946;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10778 12110 . - . ID=id-AFQR01000005.1:10778..12110;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10778 11816 . - . ID=id-AFQR01000005.1:10778..11816;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10793 10937 . - . ID=id-AFQR01000005.1:10793..10937;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10796 12107 . - . ID=id-AFQR01000005.1:10796..12107;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10796 11132 . - . ID=id-AFQR01000005.1:10796..11132;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 12200 . - . ID=id-AFQR01000005.1:10805..12200;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11918 . - . ID=id-AFQR01000005.1:10805..11918;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11789 . - . ID=id-AFQR01000005.1:10805..11789;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11468 . - . ID=id-AFQR01000005.1:10805..11468;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11342 . - . ID=id-AFQR01000005.1:10805..11342;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11174 . - . ID=id-AFQR01000005.1:10805..11174;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 11030 . - . ID=id-AFQR01000005.1:10805..11030;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10805 10826 . - . ID=id-AFQR01000005.1:10805..10826;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 10832 11651 . - . ID=id-AFQR01000005.1:10832..11651;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 12302 12835 . + . ID=gene-GGE_0200;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank CDS 12302 12835 . + 0 ID=cds-EGT83155.1;Parent=gene-GGE_0200;Dbxref=InterPro:IPR003752,InterPro:IPR022920,InterPro:IPR023380,PFAM:PF02600,NCBI_GP:EGT83155.1;Name=EGT83155.1;Ontology_term=GO:0016020,GO:0015035;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||;go_function=protein disulfide oxidoreductase activity|0015035||;locus_tag=GGE_0200;product=Disulfide bond formation protein B;protein_id=EGT83155.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12302 12824 . + . ID=id-GGE_0200;Dbxref=InterPro:IPR023380;Note=Gene3D:1.20.1550.10~disulphide bond formation protein dsbb-like domain;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12302 12746 . + . ID=id-GGE_0200-2;Note=superfamily%3B label: DsbB superfamily;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12323 12788 . + . ID=id-GGE_0200-3;Dbxref=InterPro:IPR022920;Note=HAMAP:MF_00286~dsbb~disulphide bond formation protein dsbb;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12332 12761 . + . ID=id-GGE_0200-4;Dbxref=InterPro:IPR003752,PFAM:PF02600;Note=dsbb~disulphide bond formation protein dsbb/bdbc;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12341 12371 . + . ID=id-GGE_0200-5;Note=transmembrane_regions;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12341 12356 . + . ID=id-GGE_0200-6;Note=seg;gbkey=misc_feature;gene=dsbB;locus_tag=GGE_0200 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12356 12752 . - . ID=id-AFQR01000005.1:12356..12752;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12359 12437 . - . ID=id-AFQR01000005.1:12359..12437;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12371 12728 . - . ID=id-AFQR01000005.1:12371..12728;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12371 12506 . - . ID=id-AFQR01000005.1:12371..12506;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12382 12391 . - . ID=id-AFQR01000005.1:12382..12391;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12395 12449 . - . ID=id-AFQR01000005.1:12395..12449;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 12883 13365 . - . ID=gene-GGE_0201;Name=GGE_0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0201 GCA_000222085.2|AFQR01000005.1 Genbank CDS 12883 13365 . - 0 ID=cds-EGT83156.1;Parent=gene-GGE_0201;Dbxref=GeneID:1175183,InterPro:IPR016595,PIR:PIRSF012320,NCBI_GP:EGT83156.1;Name=EGT83156.1;Note=HI_0178;gbkey=CDS;locus_tag=GGE_0201;product=putative lipoprotein;protein_id=EGT83156.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12883 13345 . - . ID=id-GGE_0201;Dbxref=InterPro:IPR016595,PIR:PIRSF012320;Note=predicted periplasmic protein%2C hi0178 type~periplasmic protein%2C hi0178%2C predicted;gbkey=misc_feature;locus_tag=GGE_0201 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12883 12931 . - . ID=id-GGE_0201-2;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0201 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 12895 12913 . - . ID=id-GGE_0201-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0201 GCA_000222085.2|AFQR01000005.1 Genbank gene 13397 14137 . - . ID=gene-GGE_0202;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank CDS 13397 14137 . - 0 ID=cds-EGT83157.1;Parent=gene-GGE_0202;Dbxref=GeneID:1172447,InterPro:IPR001989,InterPro:IPR007197,InterPro:IPR012838,PFAM:PF04055,TIGRFAM:TIGR02493,NCBI_GP:EGT83157.1;Name=EGT83157.1;Ontology_term=GO:0055114,GO:0006800,GO:0051539,GO:0043365,GO:0003824,GO:0051536,GO:0016491;gbkey=CDS;gene=pflA;go_function=4 iron 4 sulfur cluster binding|0051539||,[formate-C-acetyltransferase]-activating enzyme activity|0043365||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,oxygen and reactive oxygen species metabolic process|0006800||;locus_tag=GGE_0202;product=Pyruvate formate-lyase 1-activating enzyme;protein_id=EGT83157.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13397 14135 . - . ID=id-GGE_0202;Note=multi-dom%3B label: pflA;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13415 14102 . - . ID=id-GGE_0202-2;Dbxref=InterPro:IPR012838,TIGRFAM:TIGR02493;Note=pfla: pyruvate formate-lyase 1-activating en~pyruvate formate-lyase activating;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13451 13463 . - . ID=id-GGE_0202-3;Dbxref=InterPro:IPR001989;Note=PatternScan:PS01087~radical_activating~radical-activating enzyme%2C conserved site;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13454 14003 . - . ID=id-GGE_0202-4;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13469 13937 . - . ID=id-GGE_0202-5;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13472 13865 . - . ID=id-GGE_0202-6;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13607 13922 . - . ID=id-GGE_0202-7;Note=Gene3D:3.80.30.10;gbkey=misc_feature;gene=pflA;locus_tag=GGE_0202 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 13454 13751 . + . ID=id-AFQR01000005.1:13454..13751;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14240 14249 . + . ID=id-AFQR01000005.1:14240..14249;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 14253 14579 . - . ID=gene-GGE_0203;Name=GGE_0203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0203 GCA_000222085.2|AFQR01000005.1 Genbank CDS 14253 14579 . - 0 ID=cds-EGT83158.1;Parent=gene-GGE_0203;Dbxref=GeneID:319898145,InterPro:IPR007138,InterPro:IPR011008,PFAM:PF03992,NCBI_GP:EGT83158.1;Name=EGT83158.1;Note=YP_004136342;Ontology_term=GO:0017000,GO:0005737,GO:0016491;gbkey=CDS;go_component=cytoplasm|0005737||;go_function=oxidoreductase activity|0016491||;go_process=antibiotic biosynthetic process|0017000||;locus_tag=GGE_0203;product=Hypothetical protein;protein_id=EGT83158.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14289 14544 . - . ID=id-GGE_0203;Note=superfamily%3B label: ABM superfamily;gbkey=misc_feature;locus_tag=GGE_0203 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14292 14535 . - . ID=id-GGE_0203-2;Note=Gene3D:3.30.70.900;gbkey=misc_feature;locus_tag=GGE_0203 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14292 14532 . - . ID=id-GGE_0203-3;Dbxref=InterPro:IPR011008;Note=superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel;gbkey=misc_feature;locus_tag=GGE_0203 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14292 14472 . - . ID=id-GGE_0203-4;Dbxref=InterPro:IPR007138,PFAM:PF03992;Note=abm~antibiotic biosynthesis monooxygenase;gbkey=misc_feature;locus_tag=GGE_0203 GCA_000222085.2|AFQR01000005.1 Genbank gene 14626 16944 . - . ID=gene-GGE_0204;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank CDS 14626 16944 . - 0 ID=cds-EGT83159.1;Parent=gene-GGE_0204;Dbxref=GeneID:1172448,InterPro:IPR001150,InterPro:IPR004184,InterPro:IPR005949,InterPro:IPR019777,PFAM:PF01228,PFAM:PF02901,PIR:PIRSF000379,TIGRFAM:TIGR01255,NCBI_GP:EGT83159.1;Name=EGT83159.1;Ontology_term=GO:0005975,GO:0006006,GO:0008152,GO:0005737,GO:0003824,GO:0008861;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,formate C-acetyltransferase activity|0008861||;go_process=carbohydrate metabolic process|0005975||,glucose metabolic process|0006006||,metabolic process|0008152||;locus_tag=GGE_0204;product=Formate acetyltransferase;protein_id=EGT83159.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14638 16933 . - . ID=id-GGE_0204;Note=superfamily:SSF51998~pfl-like glycyl radical enzyme;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14644 16927 . - . ID=id-GGE_0204-2;Dbxref=InterPro:IPR005949,PIR:PIRSF000379;Note=formate acetyltransferase~formate acetyltransferase;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14647 16921 . - . ID=id-GGE_0204-3;Note=Gene3D:3.20.70.20;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14665 16906 . - . ID=id-GGE_0204-4;Dbxref=InterPro:IPR005949,TIGRFAM:TIGR01255;Note=pyr_form_ly_1: formate acetyltransferas~formate acetyltransferase;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14665 16903 . - . ID=id-GGE_0204-5;Note=multi-dom%3B label: pyr_form_ly_1;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14665 16894 . - . ID=id-GGE_0204-6;Note=specific~superfamily%3B label: PFL1;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14701 16432 . - . ID=id-GGE_0204-7;Dbxref=InterPro:IPR004184,PFAM:PF02901;Note=pfl~pyruvate formate-lyase%2C pfl;gbkey=misc_feature;gene=pflB;locus_tag=GGE_0204 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14653 16852 . + . ID=id-AFQR01000005.1:14653..16852;Dbxref=InterPro:IPR019777;Note=PatternScan:PS00850~gly_radical_1~formate c-acetyltransferase glycine radical%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14659 16540 . + . ID=id-AFQR01000005.1:14659..16540;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14662 15151 . + . ID=id-AFQR01000005.1:14662..15151;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 14962 16552 . + . ID=id-AFQR01000005.1:14962..16552;Dbxref=InterPro:IPR001150,PFAM:PF01228;Note=gly_radical~formate c-acetyltransferase glycine radical;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 15013 16558 . + . ID=id-AFQR01000005.1:15013..16558;Dbxref=InterPro:IPR001150;Note=ProfileScan:PS51149~gly_radical_2~formate c-acetyltransferase glycine radical;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 16980 17834 . - . ID=gene-GGE_0205;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=GGE_0205 GCA_000222085.2|AFQR01000005.1 Genbank CDS 16980 17834 . - 0 ID=cds-EGT83160.1;Parent=gene-GGE_0205;Dbxref=GeneID:1169719,InterPro:IPR000292,PFAM:PF01226,TIGRFAM:TIGR00790,NCBI_GP:EGT83160.1;Name=EGT83160.1;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;gene=focA;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0205;product=Putative formate transporter;protein_id=EGT83160.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17028 17781 . - . ID=id-GGE_0205;Note=superfamily%3B label: Form_Nir_trans superfamily;gbkey=misc_feature;gene=focA;locus_tag=GGE_0205 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17028 17772 . - . ID=id-GGE_0205-2;Dbxref=InterPro:IPR000292,PFAM:PF01226;Note=form_nir_trans~formate/nitrite transporter;gbkey=misc_feature;gene=focA;locus_tag=GGE_0205 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17067 17745 . - . ID=id-GGE_0205-3;Dbxref=InterPro:IPR000292,TIGRFAM:TIGR00790;Note=fnt: formate/nitrite transporter~formate/nitrite transporter;gbkey=misc_feature;gene=focA;locus_tag=GGE_0205 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17797 17833 . - . ID=id-GGE_0205-4;Note=seg;gbkey=misc_feature;gene=focA;locus_tag=GGE_0205 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17010 17238 . + . ID=id-AFQR01000005.1:17010..17238;Dbxref=InterPro:IPR000292;Note=PatternScan:PS01005~formate_nitrite_tp_1~formate/nitrite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17013 17493 . + . ID=id-AFQR01000005.1:17013..17493;Dbxref=InterPro:IPR000292;Note=PatternScan:PS01006~formate_nitrite_tp_2~formate/nitrite transporter;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17754 . + . ID=id-AFQR01000005.1:17049..17754;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17574 . + . ID=id-AFQR01000005.1:17049..17574;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17472 . + . ID=id-AFQR01000005.1:17049..17472;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17331 . + . ID=id-AFQR01000005.1:17049..17331;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17196 . + . ID=id-AFQR01000005.1:17049..17196;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 17049 17085 . + . ID=id-AFQR01000005.1:17049..17085;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18048 18057 . - . ID=id-AFQR01000005.1:18048..18057;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18072 18081 . + . ID=id-AFQR01000005.1:18072..18081;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 18119 19300 . - . ID=gene-GGE_0206;Name=GGE_0206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0206 GCA_000222085.2|AFQR01000005.1 Genbank CDS 18119 19300 . - 0 ID=cds-EGT83161.1;Parent=gene-GGE_0206;Dbxref=GeneID:1176103,InterPro:IPR005494,InterPro:IPR016185,PFAM:PF03738,NCBI_GP:EGT83161.1;Name=EGT83161.1;Note=HI_0929;Ontology_term=GO:0005524,GO:0003824;gbkey=CDS;go_function=ATP binding|0005524||,catalytic activity|0003824||;locus_tag=GGE_0206;product=putative glutathione synthetase ATP-binding domain-like protein;protein_id=EGT83161.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18119 19298 . - . ID=id-GGE_0206;Note=superfamily%3B label: GSP_synth superfamily;gbkey=misc_feature;locus_tag=GGE_0206 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18125 19286 . - . ID=id-GGE_0206-2;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;locus_tag=GGE_0206 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18149 19265 . - . ID=id-GGE_0206-3;Dbxref=InterPro:IPR005494,PFAM:PF03738;Note=gsp_synth~glutathionylspermidine synthase;gbkey=misc_feature;locus_tag=GGE_0206 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 18446 18632 . + . ID=id-AFQR01000005.1:18446..18632;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 19301 19882 . - . ID=gene-GGE_0207;Name=GGE_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0207 GCA_000222085.2|AFQR01000005.1 Genbank CDS 19301 19882 . - 0 ID=cds-EGT83162.1;Parent=gene-GGE_0207;Dbxref=GeneID:1175333,NCBI_GP:EGT83162.1;Name=EGT83162.1;Note=HI_0930;gbkey=CDS;locus_tag=GGE_0207;product=putative lipoprotein;protein_id=EGT83162.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19301 19361 . - . ID=id-GGE_0207;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0207 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19643 19652 . - . ID=id-GGE_0207-2;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0207 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19334 19463 . + . ID=id-AFQR01000005.1:19334..19463;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19340 19727 . + . ID=id-AFQR01000005.1:19340..19727;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19346 19547 . + . ID=id-AFQR01000005.1:19346..19547;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 19895 20314 . - . ID=gene-GGE_0208;Name=GGE_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0208 GCA_000222085.2|AFQR01000005.1 Genbank CDS 19895 20314 . - 0 ID=cds-EGT83163.1;Parent=gene-GGE_0208;Dbxref=InterPro:IPR014449,PFAM:PF10008,PIR:PIRSF007050,NCBI_GP:EGT83163.1;Name=EGT83163.1;Note=HI_0931;gbkey=CDS;locus_tag=GGE_0208;product=putative uncharacterized;protein_id=EGT83163.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19895 20312 . - . ID=id-GGE_0208;Dbxref=InterPro:IPR014449,PIR:PIRSF007050;Note=uncharacterised conserved protein%2C ucp007050 type~conserved hypothetical protein;gbkey=misc_feature;locus_tag=GGE_0208 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19895 20309 . - . ID=id-GGE_0208-2;Note=superfamily%3B label: DUF2251 superfamily;gbkey=misc_feature;locus_tag=GGE_0208 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 19949 20183 . - . ID=id-GGE_0208-3;Dbxref=InterPro:IPR014449,PFAM:PF10008;Note=duf2251~conserved hypothetical protein;gbkey=misc_feature;locus_tag=GGE_0208 GCA_000222085.2|AFQR01000005.1 Genbank gene 20323 20961 . - . ID=gene-GGE_0209;Name=GGE_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank CDS 20323 20961 . - 0 ID=cds-EGT83164.1;Parent=gene-GGE_0209;Dbxref=GeneID:325577269,InterPro:IPR000086,InterPro:IPR015797,PFAM:PF00293,PFAM:PF12535,NCBI_GP:EGT83164.1;Name=EGT83164.1;Note=ZP_08147753;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||;locus_tag=GGE_0209;product=NUDIX family hydrolase;protein_id=EGT83164.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20356 20494 . - . ID=id-GGE_0209;Dbxref=PFAM:PF12535;Note=superfamily~nudix_n%3B label: Nudix_N superfamily;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20410 20845 . - . ID=id-GGE_0209-2;Dbxref=InterPro:IPR015797;Note=superfamily:SSF55811~nudix~nudix hydrolase domain-like;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20515 20731 . - . ID=id-GGE_0209-3;Dbxref=InterPro:IPR000086;Note=Gene3D:3.90.79.10~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20539 20701 . - . ID=id-GGE_0209-4;Note=HMMPanther:PTHR22769~family not named;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20545 20707 . - . ID=id-GGE_0209-5;Dbxref=InterPro:IPR000086;Note=ProfileScan:PS51462~nudix~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20548 20689 . - . ID=id-GGE_0209-6;Note=specific~superfamily%3B label: Nudix_Hydrolase superfamily;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20566 20659 . - . ID=id-GGE_0209-7;Dbxref=InterPro:IPR000086,PFAM:PF00293;Note=nudix~nudix hydrolase domain;gbkey=misc_feature;locus_tag=GGE_0209 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20980 20989 . - . ID=id-AFQR01000005.1:20980..20989;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 20995 21004 . + . ID=id-AFQR01000005.1:20995..21004;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 21033 22343 . - . ID=gene-GGE_0210;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank CDS 21033 22343 . - 0 ID=cds-EGT83165.1;Parent=gene-GGE_0210;Dbxref=GeneID:81336054,InterPro:IPR000941,InterPro:IPR020809,InterPro:IPR020810,InterPro:IPR020811,PFAM:PF00113,PFAM:PF03952,PIR:PIRSF001400,TIGRFAM:TIGR01060,NCBI_GP:EGT83165.1;Name=EGT83165.1;Ontology_term=GO:0006096,GO:0000015,GO:0000287,GO:0004634;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||;go_function=magnesium ion binding|0000287||,phosphopyruvate hydratase activity|0004634||;go_process=glycolysis|0006096||;locus_tag=GGE_0210;product=Enolase;protein_id=EGT83165.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21033 22341 . - . ID=id-GGE_0210;Note=multi-dom%3B label: eno;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21033 22326 . - . ID=id-GGE_0210-2;Dbxref=InterPro:IPR000941,PIR:PIRSF001400;Note=enolase~enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21033 22317 . - . ID=id-GGE_0210-3;Dbxref=InterPro:IPR000941;Note=HAMAP:MF_00318~enolase~enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21033 22284 . - . ID=id-GGE_0210-4;Note=HMMPanther:PTHR11902~family not named;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21042 21447 . - . ID=id-GGE_0210-5;Note=superfamily:SSF54826~enolase n-terminal domain-like;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21042 21429 . - . ID=id-GGE_0210-6;Dbxref=InterPro:IPR020811,PFAM:PF03952;Note=enolase_n~enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21042 21405 . - . ID=id-GGE_0210-7;Note=Gene3D:3.30.390.10;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21045 22329 . - . ID=id-GGE_0210-8;Dbxref=InterPro:IPR000941,TIGRFAM:TIGR01060;Note=eno: phosphopyruvate hydratase~enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21051 22263 . - . ID=id-GGE_0210-9;Note=specific~superfamily%3B label: enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21417 21918 . - . ID=id-GGE_0210-10;Note=Gene3D:3.20.20.120;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21459 21915 . - . ID=id-GGE_0210-11;Note=superfamily:SSF51604~enolase c-terminal domain-like;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21465 21864 . - . ID=id-GGE_0210-12;Dbxref=InterPro:IPR020810,PFAM:PF00113;Note=enolase_c~enolase;gbkey=misc_feature;gene=eno;locus_tag=GGE_0210 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21069 21984 . + . ID=id-AFQR01000005.1:21069..21984;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21075 22053 . + . ID=id-AFQR01000005.1:21075..22053;Dbxref=InterPro:IPR020809;Note=PatternScan:PS00164~enolase~enolase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21075 21528 . + . ID=id-AFQR01000005.1:21075..21528;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21078 22053 . + . ID=id-AFQR01000005.1:21078..22053;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21078 21144 . + . ID=id-AFQR01000005.1:21078..21144;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21084 21363 . + . ID=id-AFQR01000005.1:21084..21363;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21084 21354 . + . ID=id-AFQR01000005.1:21084..21354;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 21087 22140 . + . ID=id-AFQR01000005.1:21087..22140;Dbxref=InterPro:IPR000941;Note=FPrintScan:PR00148~enolase~enolase;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 22583 23047 . + . ID=gene-GGE_0211;Name=GGE_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0211 GCA_000222085.2|AFQR01000005.1 Genbank CDS 22583 23047 . + 0 ID=cds-EGT83166.1;Parent=gene-GGE_0211;Dbxref=GeneID:325577627,InterPro:IPR002777,PFAM:PF01920,NCBI_GP:EGT83166.1;Name=EGT83166.1;Note=ZP_08147902;Ontology_term=GO:0006457,GO:0016272,GO:0051082;gbkey=CDS;go_component=prefoldin complex|0016272||;go_function=unfolded protein binding|0051082||;go_process=protein folding|0006457||;locus_tag=GGE_0211;product=putative prefoldin beta-like protein;protein_id=EGT83166.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 22598 22724 . + . ID=id-GGE_0211;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0211 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 22610 22721 . + . ID=id-GGE_0211-2;Dbxref=InterPro:IPR002777,PFAM:PF01920;Note=prefoldin_2~prefoldin beta-like;gbkey=misc_feature;locus_tag=GGE_0211 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 22610 22652 . + . ID=id-GGE_0211-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0211 GCA_000222085.2|AFQR01000005.1 Genbank gene 23069 23491 . - . ID=gene-GGE_0212;Name=GGE_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0212 GCA_000222085.2|AFQR01000005.1 Genbank CDS 23069 23491 . - 0 ID=cds-EGT83167.1;Parent=gene-GGE_0212;Dbxref=GeneID:325577626,NCBI_GP:EGT83167.1;Name=EGT83167.1;Note=ZP_08147901~HMPREF9417_0642;gbkey=CDS;locus_tag=GGE_0212;product=Hypothetical protein;protein_id=EGT83167.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 23135 23138 . + . ID=id-AFQR01000005.1:23135..23138;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000005.1 Genbank gene 23496 24398 . - . ID=gene-GGE_0213;Name=GGE_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0213 GCA_000222085.2|AFQR01000005.1 Genbank CDS 23496 24398 . - 0 ID=cds-EGT83168.1;Parent=gene-GGE_0213;Dbxref=GeneID:325577625,NCBI_GP:EGT83168.1;Name=EGT83168.1;Note=ZP_08147900;gbkey=CDS;locus_tag=GGE_0213;product=transposase;protein_id=EGT83168.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 23517 23769 . - . ID=id-GGE_0213;Note=multi-dom%3B label: COG3677;gbkey=misc_feature;locus_tag=GGE_0213 GCA_000222085.2|AFQR01000005.1 Genbank gene 24642 24977 . + . ID=gene-GGE_0214;Name=GGE_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank CDS 24642 24977 . + 0 ID=cds-EGT83169.1;Parent=gene-GGE_0214;Dbxref=GeneID:145641805,InterPro:IPR001387,InterPro:IPR010744,InterPro:IPR010982,PFAM:PF07022,NCBI_GP:EGT83169.1;Name=EGT83169.1;Note=ZP_01797380;Ontology_term=GO:0016481,GO:0003677,GO:0043565,GO:0016564;gbkey=CDS;go_function=DNA binding|0003677||,sequence-specific DNA binding|0043565||,transcription repressor activity|0016564||;go_process=negative regulation of transcription|0016481||;locus_tag=GGE_0214;product=putative bacteriophage CI repressor;protein_id=EGT83169.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24642 24834 . + . ID=id-GGE_0214;Dbxref=InterPro:IPR010982;Note=superfamily:SSF47413~lambda repressor-like dna-binding domains~lambda repressor-like%2C dna-binding;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24651 24969 . + . ID=id-GGE_0214-2;Note=multi-dom%3B label: HipB;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24651 24843 . + . ID=id-GGE_0214-3;Dbxref=InterPro:IPR010744,PFAM:PF07022;Note=phage_ci_repr~bacteriophage ci repressor;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24654 24831 . + . ID=id-GGE_0214-4;Note=Gene3D:1.10.260.40;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24657 24813 . + . ID=id-GGE_0214-5;Note=specific~superfamily%3B label: HTH_XRE;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 24663 24807 . + . ID=id-GGE_0214-6;Dbxref=InterPro:IPR001387;Note=ProfileScan:PS50943~hth_croc1~helix-turn-helix type 3;gbkey=misc_feature;locus_tag=GGE_0214 GCA_000222085.2|AFQR01000005.1 Genbank gene 25068 25817 . + . ID=gene-GGE_0215;Name=GGE_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0215 GCA_000222085.2|AFQR01000005.1 Genbank CDS 25068 25817 . + 0 ID=cds-EGT83170.1;Parent=gene-GGE_0215;Dbxref=InterPro:IPR012327,PFAM:PF02086,NCBI_GP:EGT83170.1;Name=EGT83170.1;Note=Hypothetical d12 class N6 adenine-specific DNA methyltransferase;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||;locus_tag=GGE_0215;product=putative d12 class N6 adenine-specific DNA methyltransferase;protein_id=EGT83170.1;transl_table=11 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 25167 25710 . + . ID=id-GGE_0215;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;locus_tag=GGE_0215 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 25191 25683 . + . ID=id-GGE_0215-2;Note=superfamily%3B label: MethyltransfD12 superfamily;gbkey=misc_feature;locus_tag=GGE_0215 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 25191 25680 . + . ID=id-GGE_0215-3;Dbxref=InterPro:IPR012327,PFAM:PF02086;Note=methyltransfd12~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;locus_tag=GGE_0215 GCA_000222085.2|AFQR01000005.1 Genbank sequence_feature 25074 25470 . - . ID=id-AFQR01000005.1:25074..25470;Note=Gene3D:3.40.50.150;gbkey=misc_feature ##sequence-region AFQR01000004.1 1 153990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000004.1 Genbank region 1 153990 . + . ID=AFQR01000004.1:1..153990;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 587 596 . - . ID=id-AFQR01000004.1:587..596;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 1371 3605 . - . ID=gene-GGE_0048;Name=tdhA;gbkey=Gene;gene=tdhA;gene_biotype=protein_coding;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank CDS 1371 3605 . - 0 ID=cds-EGT83171.1;Parent=gene-GGE_0048;Dbxref=InterPro:IPR000531,InterPro:IPR010917,InterPro:IPR010949,InterPro:IPR011276,InterPro:IPR012910,PFAM:PF00593,PFAM:PF07715,TIGRFAM:TIGR01785,TIGRFAM:TIGR01786,NCBI_GP:EGT83171.1;Name=EGT83171.1;Ontology_term=GO:0006810,GO:0016020,GO:0019867,GO:0004872,GO:0005215;gbkey=CDS;gene=tdhA;go_component=membrane|0016020||,outer membrane|0019867||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0048;product=TonB-dependent heme receptor A;protein_id=EGT83171.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1431 3546 . - . ID=id-GGE_0048;Dbxref=InterPro:IPR010949,TIGRFAM:TIGR01786;Note=tonb-hemlactrns: tonb-dependent hemog~tonb-dependent haemoglobin/transferrin/lactoferrin receptor;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1479 3498 . - . ID=id-GGE_0048-2;Dbxref=InterPro:IPR011276,TIGRFAM:TIGR01785;Note=tonb-hemin: tonb-dependent heme/hemog~tonb-dependent haem/haemoglobin receptor;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1530 3447 . - . ID=id-GGE_0048-3;Note=multi-dom%3B label: TonB-hemin;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1530 1668 . - . ID=id-GGE_0048-4;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1533 3444 . - . ID=id-GGE_0048-5;Note=specific~superfamily~superfamily:SSF56935~porins%3B label: ligand_gated_channel;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1533 1671 . - . ID=id-GGE_0048-6;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1833 3144 . - . ID=id-GGE_0048-7;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature;gene=tdhA;locus_tag=GGE_0048 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 1425 3552 . + . ID=id-AFQR01000004.1:1425..3552;Dbxref=InterPro:IPR010917;Note=PatternScan:PS01156~tonb_dependent_rec_2~tonb-dependent receptor%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 2193 2778 . + . ID=id-AFQR01000004.1:2193..2778;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 4156 4743 . + . ID=gene-GGE_0049;Name=GGE_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0049 GCA_000222085.2|AFQR01000004.1 Genbank CDS 4156 4743 . + 0 ID=cds-EGT83172.1;Parent=gene-GGE_0049;Dbxref=GeneID:6831713,InterPro:IPR005122,PFAM:PF03167,NCBI_GP:EGT83172.1;Name=EGT83172.1;Note=HI_0220.2;gbkey=CDS;locus_tag=GGE_0049;product=putative uracil-DNA glycosylase-like protein;protein_id=EGT83172.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4165 4723 . + . ID=id-GGE_0049;Note=superfamily%3B label: UDG superfamily;gbkey=misc_feature;locus_tag=GGE_0049 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4168 4726 . + . ID=id-GGE_0049-2;Dbxref=InterPro:IPR005122;Note=superfamily:SSF52141~uracil-dna glycosylase-like~uracil-dna glycosylase-like;gbkey=misc_feature;locus_tag=GGE_0049 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4168 4702 . + . ID=id-GGE_0049-3;Dbxref=InterPro:IPR005122;Note=Gene3D:3.40.470.10~uracil-dna glycosylase-like;gbkey=misc_feature;locus_tag=GGE_0049 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4255 4615 . + . ID=id-GGE_0049-4;Dbxref=InterPro:IPR005122,PFAM:PF03167;Note=udg~uracil-dna glycosylase-like;gbkey=misc_feature;locus_tag=GGE_0049 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4613 4622 . - . ID=id-AFQR01000004.1:4613..4622;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 4812 6653 . + . ID=gene-GGE_0050;Name=GGE_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0050 GCA_000222085.2|AFQR01000004.1 Genbank CDS 4812 6653 . + 0 ID=cds-EGT83173.1;Parent=gene-GGE_0050;Dbxref=GeneID:68248827,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR014409,PFAM:PF00072,PFAM:PF00512,PFAM:PF01627,PFAM:PF02518,PIR:PIRSF003182,NCBI_GP:EGT83173.1;Name=EGT83173.1;Note=YP_247939;Ontology_term=GO:0018106,GO:0016310,GO:0006355,GO:0007165,GO:0000160,GO:0016021,GO:0016020,GO:0005524,GO:0004673,GO:0004871,GO:0016772,GO:0000156,GO:0000155;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,protein histidine kinase activity|0004673||,signal transducer activity|0004871||,transferase activity transferring phosphorus-containing groups|0016772||,two-component response regulator activity|0000156||,two-component sensor activity|0000155||;go_process=peptidyl-histidine phosphorylation|0018106||,phosphorylation|0016310||,regulation of transcription DNA-dependent|0006355||,signal transduction|0007165||,two-component signal transduction system (phosphorelay)|0000160||;locus_tag=GGE_0050;product=aerobic respiration control sensor protein ArcB;protein_id=EGT83173.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4860 6606 . + . ID=id-GGE_0050;Dbxref=InterPro:IPR014409,PIR:PIRSF003182;Note=aerobic respiration control hybrid signal transduction histidine kinase arcb~signal transduction histidine kinase%2C hybrid-type%2C aerobic respiration control arcb;gbkey=misc_feature;locus_tag=GGE_0050 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4878 5838 . + . ID=id-GGE_0050-2;Note=multi-dom%3B label: BaeS;gbkey=misc_feature;locus_tag=GGE_0050 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4902 6384 . + . ID=id-GGE_0050-3;Note=HMMPanther:PTHR24423:SF67~aerobic respiration control sensor protein arcb~HMMPanther:PTHR24423~family not named;gbkey=misc_feature;locus_tag=GGE_0050 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5241 5460 . + . ID=id-GGE_0050-4;Dbxref=InterPro:IPR005467;Note=ProfileScan:PS50109~his_kin~signal transduction histidine kinase%2C core;gbkey=misc_feature;locus_tag=GGE_0050 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4845 5718 . - . ID=id-AFQR01000004.1:4845..5718;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4851 5520 . - . ID=id-AFQR01000004.1:4851..5520;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4854 5838 . - . ID=id-AFQR01000004.1:4854..5838;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4857 5664 . - . ID=id-AFQR01000004.1:4857..5664;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4869 5766 . - . ID=id-AFQR01000004.1:4869..5766;Dbxref=InterPro:IPR004358;Note=FPrintScan:PR00344~bctrlsensor~signal transduction histidine kinase-related protein;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4881 5022 . - . ID=id-AFQR01000004.1:4881..5022;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4881 4935 . - . ID=id-AFQR01000004.1:4881..4935;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 4929 5088 . - . ID=id-AFQR01000004.1:4929..5088;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5004 5223 . - . ID=id-AFQR01000004.1:5004..5223;Dbxref=InterPro:IPR003661,PFAM:PF00512;Note=hiska~signal transduction histidine kinase%2C subgroup 1%2C dimerization/phosphoacceptor domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5004 5214 . - . ID=id-AFQR01000004.1:5004..5214;Note=specific~superfamily%3B label: HisKA;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5022 6393 . - . ID=id-AFQR01000004.1:5022..6393;Note=specific~superfamily%3B label: HPT;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5025 5193 . - . ID=id-AFQR01000004.1:5025..5193;Note=Gene3D:1.10.287.240;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5049 6399 . - . ID=id-AFQR01000004.1:5049..6399;Dbxref=InterPro:IPR008207,PFAM:PF01627;Note=hpt~signal transduction histidine kinase%2C phosphotransfer (hpt) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5070 5166 . - . ID=id-AFQR01000004.1:5070..5166;Dbxref=InterPro:IPR009082;Note=superfamily:SSF47384~homodimeric domain of signal transducing histidine kinase~signal transduction histidine kinase%2C homodimeric;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5103 6363 . - . ID=id-AFQR01000004.1:5103..6363;Dbxref=InterPro:IPR008207;Note=ProfileScan:PS50894~hpt~signal transduction histidine kinase%2C phosphotransfer (hpt) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5118 5571 . - . ID=id-AFQR01000004.1:5118..5571;Note=specific~superfamily%3B label: HATPase_c;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5133 5559 . - . ID=id-AFQR01000004.1:5133..5559;Dbxref=InterPro:IPR003594,PFAM:PF02518;Note=hatpase_c~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5148 6318 . - . ID=id-AFQR01000004.1:5148..6318;Dbxref=InterPro:IPR008207;Note=superfamily:SSF47226~histidine-containing phosphotransfer domain%2C hpt domain~signal transduction histidine kinase%2C phosphotransfer (hpt) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5148 5934 . - . ID=id-AFQR01000004.1:5148..5934;Note=multi-dom%3B label: Response_reg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5151 5934 . - . ID=id-AFQR01000004.1:5151..5934;Dbxref=InterPro:IPR001789,PFAM:PF00072;Note=response_reg~signal transduction response regulator%2C receiver domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5157 5916 . - . ID=id-AFQR01000004.1:5157..5916;Note=Gene3D:3.40.50.2300;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5166 5937 . - . ID=id-AFQR01000004.1:5166..5937;Note=specific~superfamily%3B label: REC;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5172 5931 . - . ID=id-AFQR01000004.1:5172..5931;Dbxref=InterPro:IPR001789;Note=ProfileScan:PS50110~response_regulatory~signal transduction response regulator%2C receiver domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5187 5919 . - . ID=id-AFQR01000004.1:5187..5919;Dbxref=InterPro:IPR011006;Note=superfamily:SSF52172~chey-like~chey-like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5199 6261 . - . ID=id-AFQR01000004.1:5199..6261;Dbxref=InterPro:IPR008207;Note=Gene3D:1.20.120.160~signal transduction histidine kinase%2C phosphotransfer (hpt) domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5256 5433 . - . ID=id-AFQR01000004.1:5256..5433;Dbxref=InterPro:IPR003594;Note=Gene3D:3.30.565.10~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 5274 5415 . - . ID=id-AFQR01000004.1:5274..5415;Dbxref=InterPro:IPR003594;Note=superfamily:SSF55874~atpase domain of hsp90 chaperone/dna topoisomerase ii/histidine kinase~atpase-like%2C atp-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 6737 9766 . - . ID=gene-GGE_0051;Name=GGE_0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank CDS 6737 9766 . - 0 ID=cds-EGT83174.1;Parent=gene-GGE_0051;Dbxref=GeneID:315634375,InterPro:IPR004473,InterPro:IPR006935,InterPro:IPR007409,InterPro:IPR014001,InterPro:IPR022625,PFAM:PF04313,PFAM:PF04851,PFAM:PF12008,TIGRFAM:TIGR00348,NCBI_GP:EGT83174.1;Name=EGT83174.1;Note=ZP_07889662;Ontology_term=GO:0006304,GO:0009307,GO:0005524,GO:0003677,GO:0009035,GO:0004519,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||,DNA binding|0003677||,Type I site-specific deoxyribonuclease activity|0009035||,endonuclease activity|0004519||,hydrolase activity|0016787||;go_process=DNA modification|0006304||,DNA restriction-modification system|0009307||;locus_tag=GGE_0051;product=HsdR family type I site-specific deoxyribonuclease;protein_id=EGT83174.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6761 7310 . - . ID=id-GGE_0051;Dbxref=InterPro:IPR007409,PFAM:PF04313;Note=hsdr_n~restriction endonuclease%2C type i%2C hsdr;gbkey=misc_feature;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6770 8801 . - . ID=id-GGE_0051-2;Dbxref=InterPro:IPR004473,TIGRFAM:TIGR00348;Note=multi-dom~hsdr: type i site-specific deoxyribonuclease~restriction endonuclease%2C type i%2C hsdr%3B label: hsdR;gbkey=misc_feature;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7349 7382 . - . ID=id-GGE_0051-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7571 8036 . - . ID=id-GGE_0051-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 8138 8147 . - . ID=id-GGE_0051-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0051 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6767 8267 . + . ID=id-AFQR01000004.1:6767..8267;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6773 7043 . + . ID=id-AFQR01000004.1:6773..7043;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6776 9509 . + . ID=id-AFQR01000004.1:6776..9509;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6803 6836 . + . ID=id-AFQR01000004.1:6803..6836;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6845 9161 . + . ID=id-AFQR01000004.1:6845..9161;Note=BlastProDom:PD047574~q3qa73_9gamm_q3qa73;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 6995 7079 . + . ID=id-AFQR01000004.1:6995..7079;Note=superfamily%3B label: HSDR_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7139 7589 . + . ID=id-AFQR01000004.1:7139..7589;Note=specific~superfamily%3B label: DEXDc;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7190 7490 . + . ID=id-AFQR01000004.1:7190..7490;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7226 7556 . + . ID=id-AFQR01000004.1:7226..7556;Dbxref=InterPro:IPR014001;Note=ProfileScan:PS51192~helicase_atp_bind_1~dead-like helicase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7241 7490 . + . ID=id-AFQR01000004.1:7241..7490;Dbxref=InterPro:IPR006935,PFAM:PF04851;Note=resiii~uvrabc complex%2C subunit b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7544 8837 . + . ID=id-AFQR01000004.1:7544..8837;Note=superfamily%3B label: EcoR124_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 7646 8837 . + . ID=id-AFQR01000004.1:7646..8837;Dbxref=InterPro:IPR022625,PFAM:PF12008;Note=ecor124_c~type i restriction and modification enzyme%2C subunit r;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 10069 10995 . - . ID=gene-GGE_0052;Name=GGE_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0052 GCA_000222085.2|AFQR01000004.1 Genbank CDS 10069 10995 . - 0 ID=cds-EGT83175.1;Parent=gene-GGE_0052;Dbxref=GeneID:145628527,InterPro:IPR011664,InterPro:IPR017034,PFAM:PF07751,PIR:PIRSF034934,NCBI_GP:EGT83175.1;Name=EGT83175.1;Note=ZP_01784327;gbkey=CDS;locus_tag=GGE_0052;product=putative abortive infection bacteriophage resistance-like protein;protein_id=EGT83175.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 10069 10978 . - . ID=id-GGE_0052;Dbxref=InterPro:IPR017034,PIR:PIRSF034934;Note=abortive infection bacteriophage resistance protein%2C abif/abid types~abortive infection bacteriophage resistance%2C abif/abid;gbkey=misc_feature;locus_tag=GGE_0052 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 10087 10963 . - . ID=id-GGE_0052-2;Note=superfamily%3B label: Abi_2 superfamily;gbkey=misc_feature;locus_tag=GGE_0052 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 10171 10633 . - . ID=id-GGE_0052-3;Dbxref=InterPro:IPR011664,PFAM:PF07751;Note=abi_2~abortive infection bacteriophage resistance-related;gbkey=misc_feature;locus_tag=GGE_0052 GCA_000222085.2|AFQR01000004.1 Genbank gene 11002 12114 . - . ID=gene-GGE_0053;Name=GGE_0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0053 GCA_000222085.2|AFQR01000004.1 Genbank CDS 11002 12114 . - 0 ID=cds-EGT83176.1;Parent=gene-GGE_0053;Dbxref=GeneID:300958236,InterPro:IPR000055,PFAM:PF01420,NCBI_GP:EGT83176.1;Name=EGT83176.1;Note=ZP_07170386;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||;go_process=DNA modification|0006304||;locus_tag=GGE_0053;product=type I restriction modification DNA specificity domain protein;protein_id=EGT83176.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11017 11563 . - . ID=id-GGE_0053;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature;locus_tag=GGE_0053 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11050 11476 . - . ID=id-GGE_0053-2;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature;locus_tag=GGE_0053 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11050 11437 . - . ID=id-GGE_0053-3;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature;locus_tag=GGE_0053 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11056 12058 . - . ID=id-GGE_0053-4;Note=multi-dom%3B label: HsdS;gbkey=misc_feature;locus_tag=GGE_0053 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11041 11485 . + . ID=id-AFQR01000004.1:11041..11485;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11452 11614 . + . ID=id-AFQR01000004.1:11452..11614;Dbxref=InterPro:IPR000055,PFAM:PF01420;Note=methylase_s~restriction endonuclease%2C type i%2C hsds;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11458 11608 . + . ID=id-AFQR01000004.1:11458..11608;Note=superfamily%3B label: Methylase_S superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 11536 11581 . + . ID=id-AFQR01000004.1:11536..11581;Note=superfamily:SSF116734~dna methylase specificity domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12094 12103 . + . ID=id-AFQR01000004.1:12094..12103;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 12121 13668 . - . ID=gene-GGE_0054;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank CDS 12121 13668 . - 0 ID=cds-EGT83177.1;Parent=gene-GGE_0054;Dbxref=InterPro:IPR002052,InterPro:IPR002296,InterPro:IPR003356,InterPro:IPR004546,InterPro:IPR022749,PFAM:PF02384,PFAM:PF12161,TIGRFAM:TIGR00497,NCBI_GP:EGT83177.1;Name=EGT83177.1;Ontology_term=GO:0006306,GO:0032259,GO:0003677,GO:0008170,GO:0008168,GO:0003676,GO:0009007;gbkey=CDS;gene=hsdM;go_function=DNA binding|0003677||,N-methyltransferase activity|0008170||,methyltransferase activity|0008168||,nucleic acid binding|0003676||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_0054;product=Type I restriction enzyme EcoprrI M protein;protein_id=EGT83177.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12142 13612 . - . ID=id-GGE_0054;Dbxref=InterPro:IPR004546,TIGRFAM:TIGR00497;Note=multi-dom~hsdm: type i restriction-modification system~restriction endonuclease%2C type i%2C hsdm%3B label: hsdM;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12148 13639 . - . ID=id-GGE_0054-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12154 12568 . - . ID=id-GGE_0054-3;Dbxref=InterPro:IPR022749,PFAM:PF12161;Note=hsdm_n~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12154 12346 . - . ID=id-GGE_0054-4;Note=superfamily%3B label: HsdM_N superfamily;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12640 13048 . - . ID=id-GGE_0054-5;Dbxref=InterPro:IPR003356,PFAM:PF02384;Note=n6_mtase~dna methylase%2C adenine-specific;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12718 12811 . - . ID=id-GGE_0054-6;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=hsdM;locus_tag=GGE_0054 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12142 13018 . + . ID=id-AFQR01000004.1:12142..13018;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12160 13009 . + . ID=id-AFQR01000004.1:12160..13009;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12166 12790 . + . ID=id-AFQR01000004.1:12166..12790;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12172 12712 . + . ID=id-AFQR01000004.1:12172..12712;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12196 13123 . + . ID=id-AFQR01000004.1:12196..13123;Dbxref=InterPro:IPR002296;Note=FPrintScan:PR00507~n12n6mtfrase~n6 adenine-specific dna methyltransferase%2C n12 class;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12208 13576 . + . ID=id-AFQR01000004.1:12208..13576;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 12445 12715 . + . ID=id-AFQR01000004.1:12445..12715;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 13909 15954 . - . ID=gene-GGE_0055;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank CDS 13909 15954 . - 0 ID=cds-EGT83178.1;Parent=gene-GGE_0055;Dbxref=GeneID:1171905,InterPro:IPR001567,PFAM:PF01432,NCBI_GP:EGT83178.1;Name=EGT83178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||;go_process=proteolysis|0006508||;locus_tag=GGE_0055;product=Oligopeptidase A;protein_id=EGT83178.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13909 15952 . - . ID=id-GGE_0055;Note=multi-dom%3B label: Dcp;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13918 15940 . - . ID=id-GGE_0055-2;Note=superfamily:SSF55486~metalloproteases ('zincins')%2C catalytic domain;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13921 15943 . - . ID=id-GGE_0055-3;Note=HMMPanther:PTHR11804:SF7~oligopeptidase a~HMMPanther:PTHR11804~family not named;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13942 14296 . - . ID=id-GGE_0055-4;Note=Gene3D:1.20.1050.40;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13975 15883 . - . ID=id-GGE_0055-5;Note=specific~superfamily%3B label: GluZincin superfamily;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 14578 15277 . - . ID=id-GGE_0055-6;Dbxref=InterPro:IPR001567,PFAM:PF01432;Note=peptidase_m3~peptidase m3a/m3b%2C thimet/oligopeptidase f;gbkey=misc_feature;gene=prlC;locus_tag=GGE_0055 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13936 15724 . + . ID=id-AFQR01000004.1:13936..15724;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 13948 14488 . + . ID=id-AFQR01000004.1:13948..14488;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 14347 14989 . + . ID=id-AFQR01000004.1:14347..14989;Note=Gene3D:3.40.390.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 14431 15427 . + . ID=id-AFQR01000004.1:14431..15427;Note=Gene3D:1.10.1370.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 15810 15819 . + . ID=id-AFQR01000004.1:15810..15819;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 16071 16433 . + . ID=gene-GGE_0056;Name=GGE_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank CDS 16071 16433 . + 0 ID=cds-EGT83179.1;Parent=gene-GGE_0056;Dbxref=GeneID:309972665,InterPro:IPR007401,PFAM:PF04304,PIR:PIRSF016789,NCBI_GP:EGT83179.1;Name=EGT83179.1;Note=ADO95866;gbkey=CDS;locus_tag=GGE_0056;product=Hypothetical protein;protein_id=EGT83179.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16071 16431 . + . ID=id-GGE_0056;Dbxref=InterPro:IPR007401,PIR:PIRSF016789;Note=predicted membrane protein~protein of unknown function duf454;gbkey=misc_feature;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16071 16407 . + . ID=id-GGE_0056-2;Note=superfamily%3B label: DUF454 superfamily;gbkey=misc_feature;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16110 16149 . + . ID=id-GGE_0056-3;Note=seg;gbkey=misc_feature;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16116 16140 . + . ID=id-GGE_0056-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16206 16275 . + . ID=id-GGE_0056-5;Dbxref=InterPro:IPR007401,PFAM:PF04304;Note=duf454~protein of unknown function duf454;gbkey=misc_feature;locus_tag=GGE_0056 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16125 16293 . - . ID=id-AFQR01000004.1:16125..16293;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16131 16356 . - . ID=id-AFQR01000004.1:16131..16356;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 16426 17967 . + . ID=gene-GGE_0057;Name=GGE_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank CDS 16426 17967 . + 0 ID=cds-EGT83180.1;Parent=gene-GGE_0057;Dbxref=InterPro:IPR000914,PFAM:PF00496,NCBI_GP:EGT83180.1;Name=EGT83180.1;Note=HI_0213;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0057;product=Putative binding protein;protein_id=EGT83180.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16450 17938 . + . ID=id-GGE_0057;Note=multi-dom%3B label: OppA;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16579 17803 . + . ID=id-GGE_0057-2;Note=specific~superfamily%3B label: PBP2_NikA_DppA_OppA_like superfamily;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16609 17785 . + . ID=id-GGE_0057-3;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16669 16741 . + . ID=id-GGE_0057-4;Note=Gene3D:3.90.76.10;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16702 17452 . + . ID=id-GGE_0057-5;Dbxref=InterPro:IPR000914,PFAM:PF00496;Note=sbp_bac_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 17302 17311 . + . ID=id-GGE_0057-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 17790 17799 . + . ID=id-GGE_0057-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0057 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16492 16717 . - . ID=id-AFQR01000004.1:16492..16717;Dbxref=InterPro:IPR000914;Note=PatternScan:PS01040~sbp_bacterial_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16627 16984 . - . ID=id-AFQR01000004.1:16627..16984;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 16948 16957 . - . ID=id-AFQR01000004.1:16948..16957;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 17038 17260 . - . ID=id-AFQR01000004.1:17038..17260;Note=Gene3D:3.10.105.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 18288 18938 . - . ID=gene-GGE_0058;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank CDS 18288 18938 . - 0 ID=cds-EGT83181.1;Parent=gene-GGE_0058;Dbxref=GeneID:8039790,InterPro:IPR000926,PFAM:PF00925,TIGRFAM:TIGR00505,NCBI_GP:EGT83181.1;Name=EGT83181.1;Ontology_term=GO:0009231,GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||;go_process=riboflavin biosynthetic process|0009231||;locus_tag=GGE_0058;product=GTP cyclohydrolase-2;protein_id=EGT83181.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18294 18879 . - . ID=id-GGE_0058;Dbxref=InterPro:IPR000926;Note=HAMAP:MF_00179~riba~gtp cyclohydrolase ii%2C riba;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18294 18813 . - . ID=id-GGE_0058-2;Note=superfamily:SSF142695~riba-like;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18297 18867 . - . ID=id-GGE_0058-3;Note=HMMPanther:PTHR21327~family not named;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18300 18867 . - . ID=id-GGE_0058-4;Note=specific~superfamily%3B label: GTP_cyclohydro2;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18303 18864 . - . ID=id-GGE_0058-5;Dbxref=InterPro:IPR000926,TIGRFAM:TIGR00505;Note=riba: gtp cyclohydrolase ii~gtp cyclohydrolase ii%2C riba;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 18306 18792 . - . ID=id-GGE_0058-6;Dbxref=InterPro:IPR000926,PFAM:PF00925;Note=gtp_cyclohydro2~gtp cyclohydrolase ii%2C riba;gbkey=misc_feature;gene=ribA;locus_tag=GGE_0058 GCA_000222085.2|AFQR01000004.1 Genbank gene 19008 19733 . + . ID=gene-GGE_0059;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=GGE_0059 GCA_000222085.2|AFQR01000004.1 Genbank CDS 19008 19733 . + 0 ID=cds-EGT83182.1;Parent=gene-GGE_0059;Dbxref=GeneID:1172464,InterPro:IPR000326,InterPro:IPR016118,PFAM:PF01569,NCBI_GP:EGT83182.1;Name=EGT83182.1;Ontology_term=GO:0016020,GO:0003824;gbkey=CDS;gene=pgpB;go_component=membrane|0016020||;go_function=catalytic activity|0003824||;locus_tag=GGE_0059;product=Phosphatidylglycerophosphatase B;protein_id=EGT83182.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19008 19722 . + . ID=id-GGE_0059;Dbxref=InterPro:IPR000326;Note=superfamily:SSF48317~acid phosphatase/vanadium-dependent haloperoxidase~phosphatidic acid phosphatase type 2/haloperoxidase;gbkey=misc_feature;gene=pgpB;locus_tag=GGE_0059 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19029 19068 . + . ID=id-GGE_0059-2;Note=transmembrane_regions;gbkey=misc_feature;gene=pgpB;locus_tag=GGE_0059 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19080 19644 . + . ID=id-GGE_0059-3;Note=specific~superfamily%3B label: PAP2_like superfamily;gbkey=misc_feature;gene=pgpB;locus_tag=GGE_0059 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19239 19488 . + . ID=id-GGE_0059-4;Dbxref=InterPro:IPR000326,PFAM:PF01569;Note=pap2~phosphatidic acid phosphatase type 2/haloperoxidase;gbkey=misc_feature;gene=pgpB;locus_tag=GGE_0059 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19062 19224 . - . ID=id-AFQR01000004.1:19062..19224;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19068 19569 . - . ID=id-AFQR01000004.1:19068..19569;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19068 19146 . - . ID=id-AFQR01000004.1:19068..19146;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19077 19638 . - . ID=id-AFQR01000004.1:19077..19638;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19077 19482 . - . ID=id-AFQR01000004.1:19077..19482;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19230 19461 . - . ID=id-AFQR01000004.1:19230..19461;Note=HMMPanther:PTHR14969~family not named;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19284 19431 . - . ID=id-AFQR01000004.1:19284..19431;Dbxref=InterPro:IPR016118;Note=Gene3D:1.20.144.10~phosphatidic acid phosphatase/chloroperoxidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 19797 20648 . + . ID=gene-GGE_0060;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank CDS 19797 20648 . + 0 ID=cds-EGT83183.1;Parent=gene-GGE_0060;Dbxref=GeneID:81336798,InterPro:IPR000600,PFAM:PF00480,NCBI_GP:EGT83183.1;Name=EGT83183.1;gbkey=CDS;gene=nagK;locus_tag=GGE_0060;product=N-acetyl-D-glucosamine kinase;protein_id=EGT83183.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19797 20634 . + . ID=id-GGE_0060;Note=superfamily~HMMPanther:PTHR18964:SF13~glucose kinase~HMMPanther:PTHR18964~family not named%3B label: FGGY_N superfamily;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19797 20619 . + . ID=id-GGE_0060-2;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19797 20199 . + . ID=id-GGE_0060-3;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19809 20373 . + . ID=id-GGE_0060-4;Dbxref=InterPro:IPR000600,PFAM:PF00480;Note=rok~rok;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20202 20235 . + . ID=id-GGE_0060-5;Note=Gene3D:3.30.420.160;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20457 20466 . + . ID=id-GGE_0060-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=nagK;locus_tag=GGE_0060 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19854 20169 . - . ID=id-AFQR01000004.1:19854..20169;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 19881 20187 . - . ID=id-AFQR01000004.1:19881..20187;Dbxref=InterPro:IPR000600;Note=PatternScan:PS01125~rok~rok;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 20897 22336 . + . ID=gene-GGE_0061;Name=GGE_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank CDS 20897 22336 . + 0 ID=cds-EGT83184.1;Parent=gene-GGE_0061;Dbxref=GeneID:1175473,InterPro:IPR001463,PFAM:PF01235,TIGRFAM:TIGR00835,NCBI_GP:EGT83184.1;Name=EGT83184.1;Note=HI_0183;Ontology_term=GO:0006814,GO:0016020,GO:0005283;gbkey=CDS;go_component=membrane|0016020||;go_function=sodium:amino acid symporter activity|0005283||;go_process=sodium ion transport|0006814||;locus_tag=GGE_0061;product=putative sodium:alanine symporter-like protein;protein_id=EGT83184.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20972 22202 . + . ID=id-GGE_0061;Dbxref=InterPro:IPR001463,TIGRFAM:TIGR00835;Note=agcs: amino acid carrier protein~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20972 22169 . + . ID=id-GGE_0061-2;Dbxref=InterPro:IPR001463,TIGRFAM:TIGR00835;Note=agcs: amino acid carrier protein~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20975 20999 . + . ID=id-GGE_0061-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20981 20984 . + . ID=id-GGE_0061-4;Note=seg;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 21050 22169 . + . ID=id-GGE_0061-5;Note=superfamily%3B label: Na_Ala_symp superfamily;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 21050 22136 . + . ID=id-GGE_0061-6;Note=superfamily%3B label: Na_Ala_symp superfamily;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 21053 22166 . + . ID=id-GGE_0061-7;Dbxref=InterPro:IPR001463,PFAM:PF01235;Note=na_ala_symp~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 21053 22133 . + . ID=id-GGE_0061-8;Dbxref=InterPro:IPR001463,PFAM:PF01235;Note=na_ala_symp~sodium alanine symporter;gbkey=misc_feature;locus_tag=GGE_0061 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20912 21773 . - . ID=id-AFQR01000004.1:20912..21773;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20942 22073 . - . ID=id-AFQR01000004.1:20942..22073;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20945 22163 . - . ID=id-AFQR01000004.1:20945..22163;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20945 21773 . - . ID=id-AFQR01000004.1:20945..21773;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20945 21191 . - . ID=id-AFQR01000004.1:20945..21191;Dbxref=InterPro:IPR001463;Note=PatternScan:PS00873~na_alanine_symp~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20951 22067 . - . ID=id-AFQR01000004.1:20951..22067;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20951 20981 . - . ID=id-AFQR01000004.1:20951..20981;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20954 21833 . - . ID=id-AFQR01000004.1:20954..21833;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20954 21464 . - . ID=id-AFQR01000004.1:20954..21464;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20957 21548 . - . ID=id-AFQR01000004.1:20957..21548;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20957 21464 . - . ID=id-AFQR01000004.1:20957..21464;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20960 22148 . - . ID=id-AFQR01000004.1:20960..22148;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 22163 . - . ID=id-AFQR01000004.1:20966..22163;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21968 . - . ID=id-AFQR01000004.1:20966..21968;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21962 . - . ID=id-AFQR01000004.1:20966..21962;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21815 . - . ID=id-AFQR01000004.1:20966..21815;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21632 . - . ID=id-AFQR01000004.1:20966..21632;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21536 . - . ID=id-AFQR01000004.1:20966..21536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21353 . - . ID=id-AFQR01000004.1:20966..21353;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 21191 . - . ID=id-AFQR01000004.1:20966..21191;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20966 20984 . - . ID=id-AFQR01000004.1:20966..20984;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20975 22073 . - . ID=id-AFQR01000004.1:20975..22073;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20978 22163 . - . ID=id-AFQR01000004.1:20978..22163;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20978 21191 . - . ID=id-AFQR01000004.1:20978..21191;Dbxref=InterPro:IPR001463;Note=PatternScan:PS00873~na_alanine_symp~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20984 22067 . - . ID=id-AFQR01000004.1:20984..22067;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20987 21833 . - . ID=id-AFQR01000004.1:20987..21833;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20987 21464 . - . ID=id-AFQR01000004.1:20987..21464;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20990 21548 . - . ID=id-AFQR01000004.1:20990..21548;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20990 21464 . - . ID=id-AFQR01000004.1:20990..21464;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20993 22148 . - . ID=id-AFQR01000004.1:20993..22148;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 22163 . - . ID=id-AFQR01000004.1:20999..22163;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21968 . - . ID=id-AFQR01000004.1:20999..21968;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21962 . - . ID=id-AFQR01000004.1:20999..21962;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21815 . - . ID=id-AFQR01000004.1:20999..21815;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21632 . - . ID=id-AFQR01000004.1:20999..21632;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21536 . - . ID=id-AFQR01000004.1:20999..21536;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21353 . - . ID=id-AFQR01000004.1:20999..21353;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 20999 21191 . - . ID=id-AFQR01000004.1:20999..21191;Dbxref=InterPro:IPR001463;Note=FPrintScan:PR00175~naalasmport~sodium alanine symporter;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 22508 22735 . + . ID=gene-GGE_0062;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank CDS 22508 22735 . + 0 ID=cds-EGT83185.1;Parent=gene-GGE_0062;Dbxref=InterPro:IPR003369,InterPro:IPR006312,PFAM:PF02416,TIGRFAM:TIGR01411,NCBI_GP:EGT83185.1;Name=EGT83185.1;Ontology_term=GO:0009306,GO:0015031,GO:0016021,GO:0005886,GO:0008565;gbkey=CDS;gene=tatA;go_component=integral to membrane|0016021||,plasma membrane|0005886||;go_function=protein transporter activity|0008565||;go_process=protein secretion|0009306||,protein transport|0015031||;locus_tag=GGE_0062;product=Sec-independent protein translocase protein tatA/E;protein_id=EGT83185.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22508 22733 . + . ID=id-GGE_0062;Dbxref=InterPro:IPR006312;Note=HAMAP:MF_00236~tata~twin-arginine translocation protein tata/e;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22517 22649 . + . ID=id-GGE_0062-2;Dbxref=InterPro:IPR006312,TIGRFAM:TIGR01411;Note=tatae: twin arginine-targeting protein trans~twin-arginine translocation protein tata/e;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22520 22655 . + . ID=id-GGE_0062-3;Dbxref=InterPro:IPR003369,PFAM:PF02416;Note=mtta_hcf106~bacterial sec-independent translocation protein mtta/hcf106;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22520 22562 . + . ID=id-GGE_0062-4;Note=transmembrane_regions;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22538 22538 . + . ID=id-GGE_0062-5;Note=seg;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22568 22640 . + . ID=id-GGE_0062-6;Note=superfamily%3B label: MttA_Hcf106 superfamily;gbkey=misc_feature;gene=tatA;locus_tag=GGE_0062 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22535 22703 . - . ID=id-AFQR01000004.1:22535..22703;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 22739 23299 . + . ID=gene-GGE_0063;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank CDS 22739 23299 . + 0 ID=cds-EGT83186.1;Parent=gene-GGE_0063;Dbxref=InterPro:IPR003998,InterPro:IPR018448,TIGRFAM:TIGR01410,NCBI_GP:EGT83186.1;Name=EGT83186.1;Ontology_term=GO:0009306,GO:0043953,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||;go_process=protein secretion|0009306||,protein transport by the Tat complex|0043953||;locus_tag=GGE_0063;product=Sec-independent protein translocase protein tatB;protein_id=EGT83186.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22739 23189 . + . ID=id-GGE_0063;Dbxref=InterPro:IPR018448;Note=HAMAP:MF_00237~tatb~twin-arginine translocation protein tatb;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22739 22802 . + . ID=id-GGE_0063-2;Dbxref=InterPro:IPR003998;Note=FPrintScan:PR01506~tatbprotein~twin-arginine translocation protein tatb-like;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22745 23294 . + . ID=id-GGE_0063-3;Note=superfamily%3B label: MttA_Hcf106 superfamily;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22745 22979 . + . ID=id-GGE_0063-4;Dbxref=InterPro:IPR018448,TIGRFAM:TIGR01410;Note=tatb: twin arginine-targeting protein transl~twin-arginine translocation protein tatb;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22751 22793 . + . ID=id-GGE_0063-5;Note=transmembrane_regions;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22766 22778 . + . ID=id-GGE_0063-6;Note=seg;gbkey=misc_feature;gene=tatB;locus_tag=GGE_0063 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22775 22886 . - . ID=id-AFQR01000004.1:22775..22886;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22796 22859 . - . ID=id-AFQR01000004.1:22796..22859;Dbxref=InterPro:IPR003998;Note=FPrintScan:PR01506~tatbprotein~twin-arginine translocation protein tatb-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22799 22802 . - . ID=id-AFQR01000004.1:22799..22802;Dbxref=InterPro:IPR003998;Note=FPrintScan:PR01506~tatbprotein~twin-arginine translocation protein tatb-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22805 22886 . - . ID=id-AFQR01000004.1:22805..22886;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 22859 22964 . - . ID=id-AFQR01000004.1:22859..22964;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 23309 24079 . + . ID=gene-GGE_0064;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank CDS 23309 24079 . + 0 ID=cds-EGT83187.1;Parent=gene-GGE_0064;Dbxref=GeneID:1176320,InterPro:IPR002033,InterPro:IPR019820,InterPro:IPR019822,PFAM:PF00902,TIGRFAM:TIGR00945,NCBI_GP:EGT83187.1;Name=EGT83187.1;gbkey=CDS;gene=tatC;locus_tag=GGE_0064;product=Sec-independent protein translocase protein tatC;protein_id=EGT83187.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23321 24068 . + . ID=id-GGE_0064;Note=superfamily%3B label: TatC superfamily;gbkey=misc_feature;gene=tatC;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23336 23393 . + . ID=id-GGE_0064-2;Dbxref=InterPro:IPR002033;Note=FPrintScan:PR01840~tatcfamily~sec-independent periplasmic protein translocase;gbkey=misc_feature;gene=tatC;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23339 23963 . + . ID=id-GGE_0064-3;Dbxref=InterPro:IPR019822,TIGRFAM:TIGR00945;Note=tatc: twin arginine-targeting protein transl~twin arginine-targeting protein translocase%2C tatc;gbkey=misc_feature;gene=tatC;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23342 23945 . + . ID=id-GGE_0064-4;Dbxref=InterPro:IPR002033,PFAM:PF00902;Note=tatc~sec-independent periplasmic protein translocase;gbkey=misc_feature;gene=tatC;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24035 24044 . + . ID=id-GGE_0064-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tatC;locus_tag=GGE_0064 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23336 23783 . - . ID=id-AFQR01000004.1:23336..23783;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23357 23678 . - . ID=id-AFQR01000004.1:23357..23678;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23363 23372 . - . ID=id-AFQR01000004.1:23363..23372;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23366 23567 . - . ID=id-AFQR01000004.1:23366..23567;Dbxref=InterPro:IPR002033;Note=FPrintScan:PR01840~tatcfamily~sec-independent periplasmic protein translocase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23369 23963 . - . ID=id-AFQR01000004.1:23369..23963;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23369 23894 . - . ID=id-AFQR01000004.1:23369..23894;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23369 23774 . - . ID=id-AFQR01000004.1:23369..23774;Dbxref=InterPro:IPR019820;Note=PatternScan:PS01218~tatc~sec-independent periplasmic protein translocase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23378 23789 . - . ID=id-AFQR01000004.1:23378..23789;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23378 23636 . - . ID=id-AFQR01000004.1:23378..23636;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23378 23534 . - . ID=id-AFQR01000004.1:23378..23534;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23390 23621 . - . ID=id-AFQR01000004.1:23390..23621;Dbxref=InterPro:IPR002033;Note=FPrintScan:PR01840~tatcfamily~sec-independent periplasmic protein translocase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 23396 23774 . - . ID=id-AFQR01000004.1:23396..23774;Dbxref=InterPro:IPR002033;Note=FPrintScan:PR01840~tatcfamily~sec-independent periplasmic protein translocase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 24454 25803 . + . ID=gene-GGE_0065;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank CDS 24454 25803 . + 0 ID=cds-EGT83188.1;Parent=gene-GGE_0065;Dbxref=GeneID:1169330,InterPro:IPR006095,InterPro:IPR006096,InterPro:IPR006097,InterPro:IPR014362,InterPro:IPR016040,PFAM:PF00208,PFAM:PF02812,PIR:PIRSF000185,NCBI_GP:EGT83188.1;Name=EGT83188.1;Ontology_term=GO:0006520,GO:0008152,GO:0055114,GO:0005488,GO:0003824,GO:0016639,GO:0016491;gbkey=CDS;gene=gdhA;go_function=binding|0005488||,catalytic activity|0003824||,oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor|0016639||,oxidoreductase activity|0016491||;go_process=cellular amino acid metabolic process|0006520||,metabolic process|0008152||,oxidation-reduction process|0055114||;locus_tag=GGE_0065;product=NADP-specific glutamate dehydrogenase;protein_id=EGT83188.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24454 25801 . + . ID=id-GGE_0065;Note=multi-dom%3B label: PRK09414;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24466 25033 . + . ID=id-GGE_0065-2;Note=superfamily:SSF53223~aminoacid dehydrogenase-like domain;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24469 25789 . + . ID=id-GGE_0065-3;Dbxref=InterPro:IPR014362,PIR:PIRSF000185;Note=glutamate dehydrogenase~glutamate dehydrogenase;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24475 25780 . + . ID=id-GGE_0065-4;Note=HMMPanther:PTHR11606:SF4~subfamily not named~HMMPanther:PTHR11606~family not named;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24475 24634 . + . ID=id-GGE_0065-5;Note=Gene3D:1.10.285.10;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24625 24844 . + . ID=id-GGE_0065-6;Dbxref=InterPro:IPR006097,PFAM:PF02812;Note=elfv_dehydrog_n~glutamate/phenylalanine/leucine/valine dehydrogenase%2C dimerization domain;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24625 24829 . + . ID=id-GGE_0065-7;Note=superfamily%3B label: ELFV_dehydrog_N superfamily;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24655 24823 . + . ID=id-GGE_0065-8;Note=Gene3D:3.40.192.10;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25039 25216 . + . ID=id-GGE_0065-9;Note=specific~superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25060 25198 . + . ID=id-GGE_0065-10;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25060 25192 . + . ID=id-GGE_0065-11;Dbxref=InterPro:IPR006096,PFAM:PF00208;Note=elfv_dehydrog~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature;gene=gdhA;locus_tag=GGE_0065 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24484 25150 . - . ID=id-AFQR01000004.1:24484..25150;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24490 25570 . - . ID=id-AFQR01000004.1:24490..25570;Dbxref=InterPro:IPR006095;Note=FPrintScan:PR00082~glfdhdrgnase~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24496 24820 . - . ID=id-AFQR01000004.1:24496..24820;Dbxref=InterPro:IPR006095;Note=PatternScan:PS00074~glfv_dehydrogenase~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24499 24796 . - . ID=id-AFQR01000004.1:24499..24796;Dbxref=InterPro:IPR006095;Note=FPrintScan:PR00082~glfdhdrgnase~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24517 25159 . - . ID=id-AFQR01000004.1:24517..25159;Dbxref=InterPro:IPR006095;Note=FPrintScan:PR00082~glfdhdrgnase~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24523 25033 . - . ID=id-AFQR01000004.1:24523..25033;Dbxref=InterPro:IPR006095;Note=FPrintScan:PR00082~glfdhdrgnase~glutamate/phenylalanine/leucine/valine dehydrogenase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24682 25573 . - . ID=id-AFQR01000004.1:24682..25573;Note=Gene3D:1.10.285.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 24946 25081 . - . ID=id-AFQR01000004.1:24946..25081;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25828 25837 . - . ID=id-AFQR01000004.1:25828..25837;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 25910 26353 . - . ID=gene-GGE_0066;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=GGE_0066 GCA_000222085.2|AFQR01000004.1 Genbank CDS 25910 26353 . - 0 ID=cds-EGT83189.1;Parent=gene-GGE_0066;Dbxref=InterPro:IPR002481,PFAM:PF01475,NCBI_GP:EGT83189.1;Name=EGT83189.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0066;product=Ferric uptake regulation protein;protein_id=EGT83189.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25919 26312 . - . ID=id-GGE_0066;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;gene=fur;locus_tag=GGE_0066 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25943 26273 . - . ID=id-GGE_0066-2;Dbxref=InterPro:IPR002481,PFAM:PF01475;Note=fur~ferric-uptake regulator;gbkey=misc_feature;gene=fur;locus_tag=GGE_0066 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25967 26258 . - . ID=id-GGE_0066-3;Note=specific~superfamily%3B label: Fur_like;gbkey=misc_feature;gene=fur;locus_tag=GGE_0066 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 25946 26231 . + . ID=id-AFQR01000004.1:25946..26231;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 26383 26907 . - . ID=gene-GGE_0067;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank CDS 26383 26907 . - 0 ID=cds-EGT83190.1;Parent=gene-GGE_0067;Dbxref=GeneID:1169695,InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR010086,PFAM:PF00258,TIGRFAM:TIGR01752,NCBI_GP:EGT83190.1;Name=EGT83190.1;Ontology_term=GO:0010181,GO:0009055,GO:0016491;gbkey=CDS;gene=fldA;go_function=FMN binding|0010181||,electron carrier activity|0009055||,oxidoreductase activity|0016491||;locus_tag=GGE_0067;product=Flavodoxin;protein_id=EGT83190.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26383 26893 . - . ID=id-GGE_0067;Note=superfamily%3B label: FMN_red superfamily;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26383 26890 . - . ID=id-GGE_0067-2;Note=Gene3D:3.40.50.360;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26383 26740 . - . ID=id-GGE_0067-3;Note=HMMPanther:PTHR19384:SF21~subfamily not named~HMMPanther:PTHR19384~family not named;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26389 26887 . - . ID=id-GGE_0067-4;Note=superfamily:SSF52218~flavoproteins;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26392 26884 . - . ID=id-GGE_0067-5;Dbxref=InterPro:IPR010086,TIGRFAM:TIGR01752;Note=flav_long: flavodoxin~flavodoxin%2C long chain;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26395 26869 . - . ID=id-GGE_0067-6;Dbxref=InterPro:IPR008254;Note=ProfileScan:PS50902~flavodoxin_like~flavodoxin/nitric oxide synthase;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26401 26848 . - . ID=id-GGE_0067-7;Dbxref=InterPro:IPR008254,PFAM:PF00258;Note=flavodoxin_1~flavodoxin/nitric oxide synthase;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 26401 26434 . - . ID=id-GGE_0067-8;Dbxref=InterPro:IPR001226;Note=PatternScan:PS00201~flavodoxin~flavodoxin%2C conserved site;gbkey=misc_feature;gene=fldA;locus_tag=GGE_0067 GCA_000222085.2|AFQR01000004.1 Genbank gene 27007 27789 . - . ID=gene-GGE_0068;Name=GGE_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank CDS 27007 27789 . - 0 ID=cds-EGT83191.1;Parent=gene-GGE_0068;Dbxref=InterPro:IPR000073,PFAM:PF00561,NCBI_GP:EGT83191.1;Name=EGT83191.1;Note=HI_0193;gbkey=CDS;locus_tag=GGE_0068;product=Putative esterase/lipase;protein_id=EGT83191.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27013 27778 . - . ID=id-GGE_0068;Note=superfamily:SSF53474~alpha/beta-hydrolases;gbkey=misc_feature;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27025 27772 . - . ID=id-GGE_0068-2;Note=multi-dom~HMMPanther:PTHR10992:SF17~abhydrolase domain-containing protein 11~HMMPanther:PTHR10992~alpha/beta hydrolase fold-containing protein%3B label: PRK10673;gbkey=misc_feature;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27061 27733 . - . ID=id-GGE_0068-3;Note=Gene3D:3.40.50.1820;gbkey=misc_feature;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27145 27631 . - . ID=id-GGE_0068-4;Note=superfamily%3B label: Esterase_lipase superfamily;gbkey=misc_feature;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27148 27628 . - . ID=id-GGE_0068-5;Dbxref=InterPro:IPR000073,PFAM:PF00561;Note=abhydrolase_1~alpha/beta hydrolase fold-1;gbkey=misc_feature;locus_tag=GGE_0068 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27049 27313 . + . ID=id-AFQR01000004.1:27049..27313;Dbxref=InterPro:IPR000073;Note=FPrintScan:PR00111~abhydrolase~alpha/beta hydrolase fold-1;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27049 27271 . + . ID=id-AFQR01000004.1:27049..27271;Dbxref=InterPro:IPR000073;Note=FPrintScan:PR00111~abhydrolase~alpha/beta hydrolase fold-1;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27052 27616 . + . ID=id-AFQR01000004.1:27052..27616;Dbxref=InterPro:IPR000073;Note=FPrintScan:PR00111~abhydrolase~alpha/beta hydrolase fold-1;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27055 27142 . + . ID=id-AFQR01000004.1:27055..27142;Dbxref=InterPro:IPR000073;Note=FPrintScan:PR00111~abhydrolase~alpha/beta hydrolase fold-1;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27236 27245 . + . ID=id-AFQR01000004.1:27236..27245;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27476 27485 . + . ID=id-AFQR01000004.1:27476..27485;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 27799 28470 . + . ID=gene-GGE_0069;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=GGE_0069 GCA_000222085.2|AFQR01000004.1 Genbank CDS 27799 28470 . + 0 ID=cds-EGT83192.1;Parent=gene-GGE_0069;Dbxref=InterPro:IPR005621,InterPro:IPR010985,PFAM:PF03925,NCBI_GP:EGT83192.1;Name=EGT83192.1;Ontology_term=GO:0032297,GO:0045449,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||;go_process=negative regulation of DNA-dependent DNA replication initiation|0032297||,regulation of transcription|0045449||;locus_tag=GGE_0069;product=Protein seqA;protein_id=EGT83192.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27862 28399 . + . ID=id-GGE_0069;Dbxref=InterPro:IPR005621,PFAM:PF03925;Note=superfamily~seqa~regulation modulator seqa%3B label: SeqA superfamily;gbkey=misc_feature;gene=seqA;locus_tag=GGE_0069 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 27862 27904 . + . ID=id-GGE_0069-2;Dbxref=InterPro:IPR010985;Note=superfamily:SSF47598~ribbon-helix-helix~ribbon-helix-helix;gbkey=misc_feature;gene=seqA;locus_tag=GGE_0069 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28108 28153 . + . ID=id-GGE_0069-3;Dbxref=InterPro:IPR005621;Note=superfamily:SSF82808~replication modulator seqa dna-binding domain~regulation modulator seqa;gbkey=misc_feature;gene=seqA;locus_tag=GGE_0069 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28120 28138 . + . ID=id-GGE_0069-4;Dbxref=InterPro:IPR005621;Note=Gene3D:1.20.1380.10~regulation modulator seqa;gbkey=misc_feature;gene=seqA;locus_tag=GGE_0069 GCA_000222085.2|AFQR01000004.1 Genbank gene 28470 29834 . + . ID=gene-GGE_0070;Name=GGE_0070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank CDS 28470 29834 . + 0 ID=cds-EGT83193.1;Parent=gene-GGE_0070;Dbxref=GeneID:148827333,InterPro:IPR000873,InterPro:IPR010192,InterPro:IPR020845,PFAM:PF00501,TIGRFAM:TIGR01923,NCBI_GP:EGT83193.1;Name=EGT83193.1;Note=YP_001292086;Ontology_term=GO:0009234,GO:0008152,GO:0003824,GO:0008756;gbkey=CDS;go_function=catalytic activity|0003824||,o-succinylbenzoate-CoA ligase activity|0008756||;go_process=menaquinone biosynthetic process|0009234||,metabolic process|0008152||;locus_tag=GGE_0070;product=O-succinylbenzoic acid--CoA ligase;protein_id=EGT83193.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28470 29820 . + . ID=id-GGE_0070;Note=multi-dom%3B label: PRK09029;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28476 29817 . + . ID=id-GGE_0070-2;Note=superfamily:SSF56801~acetyl-coa synthetase-like;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28515 28845 . + . ID=id-GGE_0070-3;Note=Gene3D:3.40.50.980;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28557 29715 . + . ID=id-GGE_0070-4;Dbxref=InterPro:IPR010192,TIGRFAM:TIGR01923;Note=mene: o-succinylbenzoate-coa ligase~o-succinylbenzoate-coa ligase;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28560 28746 . + . ID=id-GGE_0070-5;Dbxref=InterPro:IPR000873,PFAM:PF00501;Note=amp-binding~amp-dependent synthetase/ligase;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28623 28632 . + . ID=id-GGE_0070-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28839 29235 . + . ID=id-GGE_0070-7;Dbxref=InterPro:IPR000873,PFAM:PF00501;Note=amp-binding~amp-dependent synthetase/ligase;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28848 29448 . + . ID=id-GGE_0070-8;Note=HMMPanther:PTHR24096:SF14~2-succinylbenzoate--coa ligase~HMMPanther:PTHR24096~family not named;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28869 29430 . + . ID=id-GGE_0070-9;Note=superfamily%3B label: LuxE superfamily;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28890 28905 . + . ID=id-GGE_0070-10;Note=Gene3D:3.40.50.980;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29670 29679 . + . ID=id-GGE_0070-11;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0070 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28506 28860 . - . ID=id-AFQR01000004.1:28506..28860;Dbxref=InterPro:IPR020845;Note=PatternScan:PS00455~amp_binding~amp-binding%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28614 29364 . - . ID=id-AFQR01000004.1:28614..29364;Note=Gene3D:2.30.38.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 28770 29511 . - . ID=id-AFQR01000004.1:28770..29511;Note=Gene3D:3.30.300.30;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 29851 33177 . + . ID=gene-GGE_0071;Name=GGE_0071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0071 GCA_000222085.2|AFQR01000004.1 Genbank CDS 29851 33177 . + 0 ID=cds-EGT83194.1;Parent=gene-GGE_0071;Dbxref=GeneID:145635631,InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,PFAM:PF00924,NCBI_GP:EGT83194.1;Name=EGT83194.1;Note=ZP_01791328;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||;go_process=transmembrane transport|0055085||;locus_tag=GGE_0071;product=potassium efflux protein KefA;protein_id=EGT83194.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29851 33175 . + . ID=id-GGE_0071;Note=multi-dom%3B label: PRK11281;gbkey=misc_feature;locus_tag=GGE_0071 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29872 29911 . + . ID=id-GGE_0071-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0071 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 31663 31672 . + . ID=id-GGE_0071-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0071 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29871 29880 . - . ID=id-AFQR01000004.1:29871..29880;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29887 30523 . - . ID=id-AFQR01000004.1:29887..30523;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29893 31132 . - . ID=id-AFQR01000004.1:29893..31132;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29896 30601 . - . ID=id-AFQR01000004.1:29896..30601;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29899 31933 . - . ID=id-AFQR01000004.1:29899..31933;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29908 32314 . - . ID=id-AFQR01000004.1:29908..32314;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29911 32365 . - . ID=id-AFQR01000004.1:29911..32365;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29914 32491 . - . ID=id-AFQR01000004.1:29914..32491;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29917 33025 . - . ID=id-AFQR01000004.1:29917..33025;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29917 31123 . - . ID=id-AFQR01000004.1:29917..31123;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29917 30397 . - . ID=id-AFQR01000004.1:29917..30397;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29917 30214 . - . ID=id-AFQR01000004.1:29917..30214;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 32584 . - . ID=id-AFQR01000004.1:29920..32584;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 32482 . - . ID=id-AFQR01000004.1:29920..32482;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 32236 . - . ID=id-AFQR01000004.1:29920..32236;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31912 . - . ID=id-AFQR01000004.1:29920..31912;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31783 . - . ID=id-AFQR01000004.1:29920..31783;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31702 . - . ID=id-AFQR01000004.1:29920..31702;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31576 . - . ID=id-AFQR01000004.1:29920..31576;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31465 . - . ID=id-AFQR01000004.1:29920..31465;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29920 31306 . - . ID=id-AFQR01000004.1:29920..31306;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29956 32719 . - . ID=id-AFQR01000004.1:29956..32719;Dbxref=InterPro:IPR006686;Note=PatternScan:PS01246~upf0003~mechanosensitive ion channel mscs%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 29995 30517 . - . ID=id-AFQR01000004.1:29995..30517;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 30052 32629 . - . ID=id-AFQR01000004.1:30052..32629;Dbxref=InterPro:IPR010920;Note=superfamily:SSF50182~sm-like ribonucleoproteins~like-sm ribonucleoprotein (lsm)-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 30112 32368 . - . ID=id-AFQR01000004.1:30112..32368;Dbxref=InterPro:IPR011014;Note=superfamily:SSF82861~mechanosensitive channel protein mscs (yggb)%2C transmembrane region~mechanosensitive ion channel mscs%2C transmembrane-2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 30157 32833 . - . ID=id-AFQR01000004.1:30157..32833;Dbxref=InterPro:IPR011066;Note=superfamily:SSF82689~mechanosensitive channel protein mscs (yggb) domain~mechanosensitive ion channel mscs;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 30403 32554 . - . ID=id-AFQR01000004.1:30403..32554;Note=superfamily%3B label: MS_channel superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 30454 32503 . - . ID=id-AFQR01000004.1:30454..32503;Dbxref=InterPro:IPR006685,PFAM:PF00924;Note=ms_channel~mechanosensitive ion channel mscs;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 33188 34261 . + . ID=gene-GGE_0072;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank CDS 33188 34261 . + 0 ID=cds-EGT83195.1;Parent=gene-GGE_0072;Dbxref=GeneID:166218032,InterPro:IPR000453,InterPro:IPR020541,PFAM:PF01264,PIR:PIRSF001456,TIGRFAM:TIGR00033,NCBI_GP:EGT83195.1;Name=EGT83195.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||;go_process=aromatic amino acid family biosynthetic process|0009073||;locus_tag=GGE_0072;product=Chorismate synthase;protein_id=EGT83195.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33188 34259 . + . ID=id-GGE_0072;Dbxref=InterPro:IPR000453,PIR:PIRSF001456;Note=chorismate synthase~chorismate synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33194 34235 . + . ID=id-GGE_0072-2;Dbxref=InterPro:IPR000453;Note=HMMPanther:PTHR21085~family not named~chorismate synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33197 34250 . + . ID=id-GGE_0072-3;Dbxref=InterPro:IPR000453;Note=superfamily:SSF103263~chorismate synthase%2C aroc~chorismate synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33218 34229 . + . ID=id-GGE_0072-4;Dbxref=InterPro:IPR000453,TIGRFAM:TIGR00033;Note=aroc: chorismate synthase~chorismate synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33218 34211 . + . ID=id-GGE_0072-5;Dbxref=InterPro:IPR000453,PFAM:PF01264;Note=chorismate_synt~chorismate synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33218 34205 . + . ID=id-GGE_0072-6;Note=specific~superfamily%3B label: Chorismate_synthase;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33236 33236 . + . ID=id-GGE_0072-7;Dbxref=InterPro:IPR020541;Note=PatternScan:PS00787~chorismate_synthase_1~chorismate synthase%2C conserved site;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33749 33758 . + . ID=id-GGE_0072-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=aroC;locus_tag=GGE_0072 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33239 34160 . - . ID=id-AFQR01000004.1:33239..34160;Dbxref=InterPro:IPR020541;Note=PatternScan:PS00789~chorismate_synthase_3~chorismate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 33239 33560 . - . ID=id-AFQR01000004.1:33239..33560;Dbxref=InterPro:IPR020541;Note=PatternScan:PS00788~chorismate_synthase_2~chorismate synthase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 34507 35367 . + . ID=gene-GGE_0073;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank CDS 34507 35367 . + 0 ID=cds-EGT83196.1;Parent=gene-GGE_0073;Dbxref=GeneID:1170923,InterPro:IPR005073,InterPro:IPR009045,PFAM:PF03411,PIR:PIRSF018455,NCBI_GP:EGT83196.1;Name=EGT83196.1;Ontology_term=GO:0006508,GO:0030288,GO:0004252;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0073;product=Penicillin-insensitive murein endopeptidase;protein_id=EGT83196.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34507 35356 . + . ID=id-GGE_0073;Dbxref=InterPro:IPR005073,PIR:PIRSF018455;Note=penicillin-insensitive murein endopeptidase~peptidase m74%2C penicillin-insensitive murein endopeptidase;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34516 35359 . + . ID=id-GGE_0073-2;Note=multi-dom%3B label: MepA;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34525 35329 . + . ID=id-GGE_0073-3;Note=superfamily%3B label: Peptidase_M74 superfamily;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34579 35281 . + . ID=id-GGE_0073-4;Dbxref=InterPro:IPR009045;Note=superfamily:SSF55166~hedgehog/dd-peptidase~hedgehog/dd-peptidase-like protein;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34621 35233 . + . ID=id-GGE_0073-5;Dbxref=InterPro:IPR009045;Note=Gene3D:3.30.1380.10~hedgehog/dd-peptidase-like protein;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34636 35221 . + . ID=id-GGE_0073-6;Dbxref=InterPro:IPR005073,PFAM:PF03411;Note=peptidase_m74~peptidase m74%2C penicillin-insensitive murein endopeptidase;gbkey=misc_feature;gene=mepA;locus_tag=GGE_0073 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 34542 34551 . - . ID=id-AFQR01000004.1:34542..34551;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 35385 36152 . + . ID=gene-GGE_0074;Name=GGE_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0074 GCA_000222085.2|AFQR01000004.1 Genbank CDS 35385 36152 . + 0 ID=cds-EGT83197.1;Parent=gene-GGE_0074;Dbxref=GeneID:2506697,InterPro:IPR002781,PFAM:PF01925,NCBI_GP:EGT83197.1;Name=EGT83197.1;Note=HI_0198;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;locus_tag=GGE_0074;product=UPF0721 transmembrane protein;protein_id=EGT83197.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35394 36129 . + . ID=id-GGE_0074;Note=superfamily%3B label: COG0730 superfamily;gbkey=misc_feature;locus_tag=GGE_0074 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35406 35454 . + . ID=id-GGE_0074-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0074 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35418 36093 . + . ID=id-GGE_0074-3;Dbxref=InterPro:IPR002781,PFAM:PF01925;Note=multi-dom~taue~protein of unknown function duf81%3B label: TauE;gbkey=misc_feature;locus_tag=GGE_0074 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35430 35700 . - . ID=id-AFQR01000004.1:35430..35700;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35439 35850 . - . ID=id-AFQR01000004.1:35439..35850;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35445 36072 . - . ID=id-AFQR01000004.1:35445..36072;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35445 35781 . - . ID=id-AFQR01000004.1:35445..35781;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35454 35961 . - . ID=id-AFQR01000004.1:35454..35961;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35454 35622 . - . ID=id-AFQR01000004.1:35454..35622;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 35454 35517 . - . ID=id-AFQR01000004.1:35454..35517;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36167 36176 . + . ID=id-AFQR01000004.1:36167..36176;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 36199 37155 . + . ID=gene-GGE_0075;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=GGE_0075 GCA_000222085.2|AFQR01000004.1 Genbank CDS 36199 37155 . + 0 ID=cds-EGT83198.1;Parent=gene-GGE_0075;Dbxref=GeneID:1171030,InterPro:IPR004960,InterPro:IPR011921,PFAM:PF03279,TIGRFAM:TIGR02208,NCBI_GP:EGT83198.1;Name=EGT83198.1;Ontology_term=GO:0009103,GO:0009244,GO:0009276,GO:0016021,GO:0008415,GO:0016747;gbkey=CDS;gene=msbB;go_component=Gram-negative-bacterium-type cell wall|0009276||,integral to membrane|0016021||;go_function=acyltransferase activity|0008415||,transferase activity transferring acyl groups other than amino-acyl groups|0016747||;go_process=lipopolysaccharide biosynthetic process|0009103||,lipopolysaccharide core region biosynthetic process|0009244||;locus_tag=GGE_0075;product=Lipid A biosynthesis KDO2-lauroyl-lipid IVA acyltransferase;protein_id=EGT83198.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36247 37105 . + . ID=id-GGE_0075;Dbxref=InterPro:IPR011921,TIGRFAM:TIGR02208;Note=lipid_a_msbb: lipid a biosynthesis (kdo)~lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase;gbkey=misc_feature;gene=msbB;locus_tag=GGE_0075 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36253 37075 . + . ID=id-GGE_0075-2;Dbxref=InterPro:IPR004960,PFAM:PF03279;Note=lip_a_acyltrans~bacterial lipid a biosynthesis acyltransferase;gbkey=misc_feature;gene=msbB;locus_tag=GGE_0075 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36553 36757 . + . ID=id-GGE_0075-3;Note=specific~superfamily%3B label: LPLAT_LABLAT-like;gbkey=misc_feature;gene=msbB;locus_tag=GGE_0075 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36238 36289 . - . ID=id-AFQR01000004.1:36238..36289;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 36256 36286 . - . ID=id-AFQR01000004.1:36256..36286;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 37157 38044 . - . ID=gene-GGE_0076;Name=GGE_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank CDS 37157 38044 . - 0 ID=cds-EGT83199.1;Parent=gene-GGE_0076;Dbxref=GeneID:145631324,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,PFAM:PF00126,PFAM:PF03466,NCBI_GP:EGT83199.1;Name=EGT83199.1;Note=ZP_01787096;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0076;product=Putative transcriptional activator;protein_id=EGT83199.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37157 38042 . - . ID=id-GGE_0076;Note=multi-dom%3B label: PRK10082;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37169 37424 . - . ID=id-GGE_0076-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37169 37331 . - . ID=id-GGE_0076-3;Dbxref=InterPro:IPR000847;Note=ProfileScan:PS50931~hth_lysr~transcription regulator hth%2C lysr;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37172 37391 . - . ID=id-GGE_0076-4;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37178 37334 . - . ID=id-GGE_0076-5;Dbxref=InterPro:IPR000847,PFAM:PF00126;Note=superfamily~hth_1~transcription regulator hth%2C lysr%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37427 37772 . - . ID=id-GGE_0076-6;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37439 37754 . - . ID=id-GGE_0076-7;Dbxref=InterPro:IPR005119,PFAM:PF03466;Note=lysr_substrate~lysr%2C substrate-binding;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37445 37745 . - . ID=id-GGE_0076-8;Note=specific~superfamily%3B label: PBP2_LTTR_substrate;gbkey=misc_feature;locus_tag=GGE_0076 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37190 37253 . + . ID=id-AFQR01000004.1:37190..37253;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37193 37283 . + . ID=id-AFQR01000004.1:37193..37283;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37193 37220 . + . ID=id-AFQR01000004.1:37193..37220;Dbxref=InterPro:IPR000847;Note=FPrintScan:PR00039~hthlysr~transcription regulator hth%2C lysr;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 37223 37361 . + . ID=id-AFQR01000004.1:37223..37361;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 38274 38966 . + . ID=gene-GGE_0077;Name=GGE_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank CDS 38274 38966 . + 0 ID=cds-EGT83200.1;Parent=gene-GGE_0077;Dbxref=GeneID:145631325,InterPro:IPR001920,InterPro:IPR004380,InterPro:IPR015942,InterPro:IPR018187,PFAM:PF01177,TIGRFAM:TIGR00035,NCBI_GP:EGT83200.1;Name=EGT83200.1;Note=ZP_01787097;Ontology_term=GO:0006520,GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity acting on amino acids and derivatives|0016855||;go_process=cellular amino acid metabolic process|0006520||,metabolic process|0008152||;locus_tag=GGE_0077;product=Putative DNA-binding transcriptional regulator;protein_id=EGT83200.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38274 38964 . + . ID=id-GGE_0077;Dbxref=InterPro:IPR004380,TIGRFAM:TIGR00035;Note=asp_race: aspartate racemase~aspartate racemase;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38280 38946 . + . ID=id-GGE_0077-2;Note=superfamily%3B label: Asp_Glu_race superfamily;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38283 38943 . + . ID=id-GGE_0077-3;Note=multi-dom%3B label: asp_race;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38283 38607 . + . ID=id-GGE_0077-4;Dbxref=InterPro:IPR001920;Note=Gene3D:3.40.50.1860~asp/glu racemase;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38286 38613 . + . ID=id-GGE_0077-5;Dbxref=InterPro:IPR001920;Note=superfamily:SSF53681~aspartate/glutamate racemase~asp/glu racemase;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38298 38925 . + . ID=id-GGE_0077-6;Dbxref=InterPro:IPR015942,PFAM:PF01177;Note=asp_glu_race~asp/glu/hydantoin racemase;gbkey=misc_feature;locus_tag=GGE_0077 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38307 38844 . - . ID=id-AFQR01000004.1:38307..38844;Dbxref=InterPro:IPR018187;Note=PatternScan:PS00924~asp_glu_racemase_2~asp/glu racemase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38556 38616 . - . ID=id-AFQR01000004.1:38556..38616;Dbxref=InterPro:IPR001920;Note=Gene3D:3.40.50.1860~asp/glu racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38613 38628 . - . ID=id-AFQR01000004.1:38613..38628;Dbxref=InterPro:IPR001920;Note=superfamily:SSF53681~aspartate/glutamate racemase~asp/glu racemase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 38981 40285 . + . ID=gene-GGE_0078;Name=GGE_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank CDS 38981 40285 . + 0 ID=cds-EGT83201.1;Parent=gene-GGE_0078;Dbxref=GeneID:145631326,InterPro:IPR004668,PFAM:PF03605,PIR:PIRSF004539,TIGRFAM:TIGR00770,NCBI_GP:EGT83201.1;Name=EGT83201.1;Note=ZP_01787098;Ontology_term=GO:0015740,GO:0016021,GO:0015556;gbkey=CDS;go_component=integral to membrane|0016021||;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||;go_process=C4-dicarboxylate transport|0015740||;locus_tag=GGE_0078;product=anaerobic C4-dicarboxylate transporter;protein_id=EGT83201.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38981 40280 . + . ID=id-GGE_0078;Dbxref=InterPro:IPR004668,PIR:PIRSF004539;Note=anaerobic c4-dicarboxylate transporter~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38981 40277 . + . ID=id-GGE_0078-2;Note=superfamily%3B label: DcuA_DcuB superfamily;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38996 40268 . + . ID=id-GGE_0078-3;Dbxref=InterPro:IPR004668,TIGRFAM:TIGR00770;Note=dcu: transporter%2C anaerobic c4-dicarboxylate~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 38996 40061 . + . ID=id-GGE_0078-4;Dbxref=InterPro:IPR004668,PFAM:PF03605;Note=dcua_dcub~anaerobic c4-dicarboxylate membrane transporter;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39002 39077 . + . ID=id-GGE_0078-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39026 39062 . + . ID=id-GGE_0078-6;Note=seg;gbkey=misc_feature;locus_tag=GGE_0078 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39023 39506 . - . ID=id-AFQR01000004.1:39023..39506;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39029 39764 . - . ID=id-AFQR01000004.1:39029..39764;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39035 39404 . - . ID=id-AFQR01000004.1:39035..39404;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 40211 . - . ID=id-AFQR01000004.1:39050..40211;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 40082 . - . ID=id-AFQR01000004.1:39050..40082;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39956 . - . ID=id-AFQR01000004.1:39050..39956;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39869 . - . ID=id-AFQR01000004.1:39050..39869;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39662 . - . ID=id-AFQR01000004.1:39050..39662;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39476 . - . ID=id-AFQR01000004.1:39050..39476;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39371 . - . ID=id-AFQR01000004.1:39050..39371;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39245 . - . ID=id-AFQR01000004.1:39050..39245;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 39050 39140 . - . ID=id-AFQR01000004.1:39050..39140;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 40490 41461 . + . ID=gene-GGE_0079;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank CDS 40490 41461 . + 0 ID=cds-EGT83202.1;Parent=gene-GGE_0079;Dbxref=GeneID:172046805,InterPro:IPR000728,InterPro:IPR004536,InterPro:IPR010918,InterPro:IPR016188,InterPro:IPR023061,PFAM:PF00586,PFAM:PF02769,PIR:PIRSF036407,TIGRFAM:TIGR00476,NCBI_GP:EGT83202.1;Name=EGT83202.1;Ontology_term=GO:0005524,GO:0003824,GO:0004756;gbkey=CDS;gene=selD;go_function=ATP binding|0005524||,catalytic activity|0003824||,selenide water dikinase activity|0004756||;locus_tag=GGE_0079;product=Selenide%2C water dikinase;protein_id=EGT83202.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40490 41459 . + . ID=id-GGE_0079;Dbxref=InterPro:IPR023061;Note=HAMAP:MF_00625~seld~selenide%2C water dikinase%2C class i;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40490 41456 . + . ID=id-GGE_0079-2;Dbxref=InterPro:IPR004536,PIR:PIRSF036407;Note=multi-dom~selenophosphate synthetase~selenide water dikinase%3B label: PRK00943;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40490 41423 . + . ID=id-GGE_0079-3;Dbxref=InterPro:IPR004536,TIGRFAM:TIGR00476;Note=seld: selenide%2C water dikinase~selenide water dikinase;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40490 41420 . + . ID=id-GGE_0079-4;Note=specific~superfamily~HMMPanther:PTHR10256:SF0~selenide%2C water dikinase~HMMPanther:PTHR10256~selenide%2C water dikinase%3B label: PurM-like superfamily;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40490 40892 . + . ID=id-GGE_0079-5;Dbxref=InterPro:IPR016188;Note=superfamily:SSF55326~purm n-terminal domain-like~purm-like;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40514 40883 . + . ID=id-GGE_0079-6;Note=Gene3D:3.30.1330.10;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40568 40763 . + . ID=id-GGE_0079-7;Dbxref=InterPro:IPR000728,PFAM:PF00586;Note=airs~air synthase-related protein;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40901 41042 . + . ID=id-GGE_0079-8;Dbxref=InterPro:IPR010918;Note=superfamily:SSF56042~purm c-terminal domain-like~air synthase-related protein;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40913 41030 . + . ID=id-GGE_0079-9;Note=Gene3D:3.90.650.10;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 40925 41018 . + . ID=id-GGE_0079-10;Dbxref=InterPro:IPR010918,PFAM:PF02769;Note=airs_c~air synthase-related protein;gbkey=misc_feature;gene=selD;locus_tag=GGE_0079 GCA_000222085.2|AFQR01000004.1 Genbank gene 41513 42802 . - . ID=gene-GGE_0080;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank CDS 41513 42802 . - 0 ID=cds-EGT83203.1;Parent=gene-GGE_0080;Dbxref=GeneID:166222729,InterPro:IPR002314,InterPro:IPR002317,InterPro:IPR006195,InterPro:IPR010978,InterPro:IPR015866,PFAM:PF00587,PFAM:PF02403,PIR:PIRSF001529,TIGRFAM:TIGR00414,NCBI_GP:EGT83203.1;Name=EGT83203.1;Ontology_term=GO:0006434,GO:0006418,GO:0006412,GO:0005737,GO:0005524,GO:0004812,GO:0000166,GO:0004828;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,aminoacyl-tRNA ligase activity|0004812||,nucleotide binding|0000166||,serine-tRNA ligase activity|0004828||;go_process=seryl-tRNA aminoacylation|0006434||,tRNA aminoacylation for protein translation|0006418||,translation|0006412||;locus_tag=GGE_0080;product=Seryl-tRNA synthetase;protein_id=EGT83203.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 42800 . - . ID=id-GGE_0080;Dbxref=InterPro:IPR002317,PIR:PIRSF001529;Note=multi-dom~serine-trna ligase~seryl-trna synthetase%2C class iia%3B label: PRK05431;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 42797 . - . ID=id-GGE_0080-2;Dbxref=InterPro:IPR002317;Note=HMMPanther:PTHR11778~family not named~seryl-trna synthetase%2C class iia;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 42791 . - . ID=id-GGE_0080-3;Dbxref=InterPro:IPR002317;Note=HAMAP:MF_00176~ser_trna_synth_type1~seryl-trna synthetase%2C class iia;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 42776 . - . ID=id-GGE_0080-4;Dbxref=InterPro:IPR002317,TIGRFAM:TIGR00414;Note=sers: seryl-trna synthetase~seryl-trna synthetase%2C class iia;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 41852 . - . ID=id-GGE_0080-5;Dbxref=InterPro:IPR010978;Note=superfamily:SSF46589~trna-binding arm~trna-binding arm;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 41837 . - . ID=id-GGE_0080-6;Dbxref=InterPro:IPR015866,PFAM:PF02403;Note=superfamily~seryl_trna_n~seryl-trna synthetase%2C class iia%3B label: Seryl_tRNA_N superfamily;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41513 41828 . - . ID=id-GGE_0080-7;Dbxref=InterPro:IPR015866;Note=Gene3D:1.10.287.40~seryl-trna synthetase%2C class iia;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41831 42470 . - . ID=id-GGE_0080-8;Note=Gene3D:3.30.930.10;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41855 42458 . - . ID=id-GGE_0080-9;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41873 42419 . - . ID=id-GGE_0080-10;Note=specific~superfamily%3B label: class_II_aaRS-like_core superfamily;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 42029 42242 . - . ID=id-GGE_0080-11;Dbxref=InterPro:IPR006195;Note=ProfileScan:PS50862~aa_trna_ligase_ii~aminoacyl-trna synthetase%2C class ii;gbkey=misc_feature;gene=serS;locus_tag=GGE_0080 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41552 42317 . + . ID=id-AFQR01000004.1:41552..42317;Dbxref=InterPro:IPR002317;Note=FPrintScan:PR00981~trnasynthser~seryl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41555 42473 . + . ID=id-AFQR01000004.1:41555..42473;Dbxref=InterPro:IPR002317;Note=FPrintScan:PR00981~trnasynthser~seryl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41555 42353 . + . ID=id-AFQR01000004.1:41555..42353;Dbxref=InterPro:IPR002317;Note=FPrintScan:PR00981~trnasynthser~seryl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41561 41960 . + . ID=id-AFQR01000004.1:41561..41960;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41564 42578 . + . ID=id-AFQR01000004.1:41564..42578;Dbxref=InterPro:IPR002317;Note=FPrintScan:PR00981~trnasynthser~seryl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41564 42524 . + . ID=id-AFQR01000004.1:41564..42524;Dbxref=InterPro:IPR002317;Note=FPrintScan:PR00981~trnasynthser~seryl-trna synthetase%2C class iia;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41579 41741 . + . ID=id-AFQR01000004.1:41579..41741;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 41588 41606 . + . ID=id-AFQR01000004.1:41588..41606;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 42035 42035 . + . ID=id-AFQR01000004.1:42035..42035;Dbxref=InterPro:IPR002314,PFAM:PF00587;Note=trna-synt_2b~aminoacyl-trna synthetase%2C class ii (g/ h/ p/ s)%2C conserved domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43014 43122 . - . ID=id-AFQR01000004.1:43014..43122;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 43341 43559 . + . ID=gene-GGE_0081;Name=GGE_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0081 GCA_000222085.2|AFQR01000004.1 Genbank CDS 43341 43559 . + 0 ID=cds-EGT83204.1;Parent=gene-GGE_0081;Dbxref=GeneID:301156527,InterPro:IPR007420,PFAM:PF04325,NCBI_GP:EGT83204.1;Name=EGT83204.1;Note=CBW15998;gbkey=CDS;locus_tag=GGE_0081;product=Hypothetical protein;protein_id=EGT83204.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43341 43551 . + . ID=id-GGE_0081;Note=superfamily%3B label: DUF465 superfamily;gbkey=misc_feature;locus_tag=GGE_0081 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43398 43491 . + . ID=id-GGE_0081-2;Dbxref=InterPro:IPR007420,PFAM:PF04325;Note=duf465~protein of unknown function duf465;gbkey=misc_feature;locus_tag=GGE_0081 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43398 43428 . + . ID=id-GGE_0081-3;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0081 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43407 43485 . - . ID=id-AFQR01000004.1:43407..43485;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 43605 44084 . - . ID=gene-GGE_0082;Name=GGE_0082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0082 GCA_000222085.2|AFQR01000004.1 Genbank CDS 43605 44084 . - 0 ID=cds-EGT83205.1;Parent=gene-GGE_0082;Dbxref=GeneID:145629002,InterPro:IPR010619,PFAM:PF06738,NCBI_GP:EGT83205.1;Name=EGT83205.1;Note=ZP_01784801~CGSHi22121_09380;gbkey=CDS;locus_tag=GGE_0082;product=Hypothetical protein;protein_id=EGT83205.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43605 43791 . - . ID=id-GGE_0082;Note=superfamily%3B label: DUF1212 superfamily;gbkey=misc_feature;locus_tag=GGE_0082 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43614 44076 . - . ID=id-GGE_0082-2;Note=superfamily%3B label: DUF1212 superfamily;gbkey=misc_feature;locus_tag=GGE_0082 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43626 43674 . - . ID=id-GGE_0082-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0082 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43656 43860 . - . ID=id-GGE_0082-4;Dbxref=InterPro:IPR010619,PFAM:PF06738;Note=duf1212~protein of unknown function duf1212;gbkey=misc_feature;locus_tag=GGE_0082 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43674 43998 . + . ID=id-AFQR01000004.1:43674..43998;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43674 43872 . + . ID=id-AFQR01000004.1:43674..43872;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43674 43770 . + . ID=id-AFQR01000004.1:43674..43770;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 43674 43707 . + . ID=id-AFQR01000004.1:43674..43707;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 44086 44856 . - . ID=gene-GGE_0083;Name=GGE_0083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0083 GCA_000222085.2|AFQR01000004.1 Genbank CDS 44086 44856 . - 0 ID=cds-EGT83206.1;Parent=gene-GGE_0083;Dbxref=GeneID:301168767,InterPro:IPR010619,PFAM:PF06738,NCBI_GP:EGT83206.1;Name=EGT83206.1;Note=CBW28358;gbkey=CDS;locus_tag=GGE_0083;product=Putative inner membrane protein;protein_id=EGT83206.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44086 44809 . - . ID=id-GGE_0083;Note=superfamily%3B label: DUF1212 superfamily;gbkey=misc_feature;locus_tag=GGE_0083 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44134 44659 . - . ID=id-GGE_0083-2;Dbxref=InterPro:IPR010619,PFAM:PF06738;Note=duf1212~protein of unknown function duf1212;gbkey=misc_feature;locus_tag=GGE_0083 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44140 44500 . + . ID=id-AFQR01000004.1:44140..44500;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44146 44428 . + . ID=id-AFQR01000004.1:44146..44428;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44155 44773 . + . ID=id-AFQR01000004.1:44155..44773;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44155 44668 . + . ID=id-AFQR01000004.1:44155..44668;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 44155 44572 . + . ID=id-AFQR01000004.1:44155..44572;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 45077 48433 . + . ID=gene-GGE_0084;Name=GGE_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0084 GCA_000222085.2|AFQR01000004.1 Genbank CDS 45077 48433 . + 0 ID=cds-EGT83207.1;Parent=gene-GGE_0084;Dbxref=GeneID:325578746,InterPro:IPR000531,InterPro:IPR010917,InterPro:IPR012910,PFAM:PF00593,PFAM:PF07715,NCBI_GP:EGT83207.1;Name=EGT83207.1;Note=ZP_08148793;Ontology_term=GO:0006810,GO:0016020,GO:0004872,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=receptor activity|0004872||,transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0084;product=putative tonB-dependent receptor%2C beta-barrel;protein_id=EGT83207.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45143 45503 . + . ID=id-GGE_0084;Dbxref=InterPro:IPR012910;Note=Gene3D:2.170.130.10~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0084 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45167 48344 . + . ID=id-GGE_0084-2;Note=superfamily:SSF56935~porins;gbkey=misc_feature;locus_tag=GGE_0084 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45254 45350 . + . ID=id-GGE_0084-3;Dbxref=InterPro:IPR012910,PFAM:PF07715;Note=plug~tonb-dependent receptor%2C plug;gbkey=misc_feature;locus_tag=GGE_0084 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45257 46151 . + . ID=id-GGE_0084-4;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature;locus_tag=GGE_0084 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45119 47024 . - . ID=id-AFQR01000004.1:45119..47024;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45131 48380 . - . ID=id-AFQR01000004.1:45131..48380;Dbxref=InterPro:IPR010917;Note=PatternScan:PS01156~tonb_dependent_rec_2~tonb-dependent receptor%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45143 47027 . - . ID=id-AFQR01000004.1:45143..47027;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45521 45530 . - . ID=id-AFQR01000004.1:45521..45530;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45908 47597 . - . ID=id-AFQR01000004.1:45908..47597;Dbxref=InterPro:IPR000531,PFAM:PF00593;Note=tonb_dep_rec~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45938 47573 . - . ID=id-AFQR01000004.1:45938..47573;Dbxref=InterPro:IPR000531;Note=Gene3D:2.40.170.20~tonb-dependent receptor%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 45941 47570 . - . ID=id-AFQR01000004.1:45941..47570;Note=superfamily%3B label: OM_channels superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 48500 49318 . + . ID=gene-GGE_0085;Name=GGE_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0085 GCA_000222085.2|AFQR01000004.1 Genbank CDS 48500 49318 . + 0 ID=cds-EGT83208.1;Parent=gene-GGE_0085;Dbxref=GeneID:298369288,NCBI_GP:EGT83208.1;Name=EGT83208.1;Note=ZP_06980606;gbkey=CDS;locus_tag=GGE_0085;product=putative oMPA-like protein;protein_id=EGT83208.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 48530 48560 . + . ID=id-GGE_0085;Note=seg;gbkey=misc_feature;locus_tag=GGE_0085 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 48866 48950 . + . ID=id-GGE_0085-2;Note=superfamily:SSF56925~ompa-like;gbkey=misc_feature;locus_tag=GGE_0085 GCA_000222085.2|AFQR01000004.1 Genbank gene 49373 50812 . + . ID=gene-GGE_0086;Name=GGE_0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0086 GCA_000222085.2|AFQR01000004.1 Genbank CDS 49373 50812 . + 0 ID=cds-EGT83209.1;Parent=gene-GGE_0086;Dbxref=GeneID:253988726,InterPro:IPR007655,InterPro:IPR011990,InterPro:IPR013026,PFAM:PF04575,NCBI_GP:EGT83209.1;Name=EGT83209.1;Note=YP_003040082;Ontology_term=GO:0005488,GO:0005515;gbkey=CDS;go_function=binding|0005488||,protein binding|0005515||;locus_tag=GGE_0086;product=putative tetratricopeptide-like helical;protein_id=EGT83209.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49385 49406 . + . ID=id-GGE_0086;Note=seg;gbkey=misc_feature;locus_tag=GGE_0086 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49868 50318 . + . ID=id-GGE_0086-2;Note=superfamily%3B label: DUF560 superfamily;gbkey=misc_feature;locus_tag=GGE_0086 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49871 50315 . + . ID=id-GGE_0086-3;Dbxref=InterPro:IPR007655,PFAM:PF04575;Note=duf560~protein of unknown function duf560;gbkey=misc_feature;locus_tag=GGE_0086 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49427 49454 . - . ID=id-AFQR01000004.1:49427..49454;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49475 49670 . - . ID=id-AFQR01000004.1:49475..49670;Dbxref=InterPro:IPR013026;Note=ProfileScan:PS50293~tpr_region~tetratricopeptide repeat-containing;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 49556 49670 . - . ID=id-AFQR01000004.1:49556..49670;Dbxref=InterPro:IPR011990;Note=Gene3D:1.25.40.10~tetratricopeptide-like helical;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50818 50827 . - . ID=id-AFQR01000004.1:50818..50827;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 50878 52170 . - . ID=gene-GGE_0087;Name=GGE_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank CDS 50878 52170 . - 0 ID=cds-EGT83210.1;Parent=gene-GGE_0087;Dbxref=GeneID:3915998,InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,InterPro:IPR016169,PFAM:PF00571,PFAM:PF01595,PFAM:PF03471,NCBI_GP:EGT83210.1;Name=EGT83210.1;Note=HI_0107;Ontology_term=GO:0055114,GO:0003824,GO:0050660,GO:0005515;gbkey=CDS;go_function=catalytic activity|0003824||,flavin adenine dinucleotide binding|0050660||,protein binding|0005515||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0087;product=UPF0053 protein;protein_id=EGT83210.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50917 50947 . - . ID=id-GGE_0087;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50932 51406 . - . ID=id-GGE_0087-2;Note=superfamily%3B label: DUF21 superfamily;gbkey=misc_feature;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50935 52114 . - . ID=id-GGE_0087-3;Note=HMMPanther:PTHR22777~family not named;gbkey=misc_feature;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50935 51403 . - . ID=id-GGE_0087-4;Dbxref=InterPro:IPR002550,PFAM:PF01595;Note=duf21~domain of unknown function duf21;gbkey=misc_feature;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50959 52090 . - . ID=id-GGE_0087-5;Note=multi-dom%3B label: PRK11573;gbkey=misc_feature;locus_tag=GGE_0087 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50938 51190 . + . ID=id-AFQR01000004.1:50938..51190;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50947 51286 . + . ID=id-AFQR01000004.1:50947..51286;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 50947 51094 . + . ID=id-AFQR01000004.1:50947..51094;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51028 51739 . + . ID=id-AFQR01000004.1:51028..51739;Dbxref=InterPro:IPR000644,PFAM:PF00571;Note=cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51043 51733 . + . ID=id-AFQR01000004.1:51043..51733;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51052 51736 . + . ID=id-AFQR01000004.1:51052..51736;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51061 51532 . + . ID=id-AFQR01000004.1:51061..51532;Dbxref=InterPro:IPR000644;Note=ProfileScan:PS51371~cbs~cystathionine beta-synthase%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51070 51505 . + . ID=id-AFQR01000004.1:51070..51505;Note=superfamily:SSF54631~cbs-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51109 51937 . + . ID=id-AFQR01000004.1:51109..51937;Dbxref=InterPro:IPR005170,PFAM:PF03471;Note=corc_hlyc~transporter-associated domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51112 51937 . + . ID=id-AFQR01000004.1:51112..51937;Note=superfamily%3B label: CorC_HlyC superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51115 51931 . + . ID=id-AFQR01000004.1:51115..51931;Dbxref=InterPro:IPR016169;Note=Gene3D:3.30.465.10~co dehydrogenase flavolike protein%2C fad-binding%2C subdomain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51220 51544 . + . ID=id-AFQR01000004.1:51220..51544;Note=specific~superfamily%3B label: CBS_pair superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 51298 51484 . + . ID=id-AFQR01000004.1:51298..51484;Note=Gene3D:3.10.580.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52170 52179 . + . ID=id-AFQR01000004.1:52170..52179;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52188 52197 . - . ID=id-AFQR01000004.1:52188..52197;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 52421 53812 . + . ID=gene-GGE_0088;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank CDS 52421 53812 . + 0 ID=cds-EGT83211.1;Parent=gene-GGE_0088;Dbxref=GeneID:1174434,InterPro:IPR000897,InterPro:IPR004125,InterPro:IPR004780,InterPro:IPR013822,PFAM:PF00448,PFAM:PF02881,PFAM:PF02978,TIGRFAM:TIGR00959,NCBI_GP:EGT83211.1;Name=EGT83211.1;Ontology_term=GO:0006614,GO:0048500,GO:0008312,GO:0005525;gbkey=CDS;gene=ffh;go_component=signal recognition particle|0048500||;go_function=7S RNA binding|0008312||,GTP binding|0005525||;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||;locus_tag=GGE_0088;product=Signal recognition particle protein;protein_id=EGT83211.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52421 53717 . + . ID=id-GGE_0088;Dbxref=InterPro:IPR004780;Note=HMMPanther:PTHR11564:SF7~signal recognition particle protein~signal recognition particle%2C srp~HMMPanther:PTHR11564~family not named;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52421 53687 . + . ID=id-GGE_0088-2;Note=multi-dom%3B label: PRK10867;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52421 52703 . + . ID=id-GGE_0088-3;Dbxref=InterPro:IPR013822;Note=superfamily:SSF47364~domain of the srp/srp receptor g-proteins~signal recognition particle%2C srp54 subunit%2C helical bundle;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52427 53705 . + . ID=id-GGE_0088-4;Dbxref=InterPro:IPR004780,TIGRFAM:TIGR00959;Note=ffh: signal recognition particle protein~signal recognition particle%2C srp;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52427 52682 . + . ID=id-GGE_0088-5;Dbxref=InterPro:IPR013822;Note=Gene3D:1.20.120.140~signal recognition particle%2C srp54 subunit%2C helical bundle;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52436 52655 . + . ID=id-GGE_0088-6;Dbxref=InterPro:IPR013822,PFAM:PF02881;Note=superfamily~srp54_n~signal recognition particle%2C srp54 subunit%2C helical bundle%3B label: SRP54_N superfamily;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52694 53045 . + . ID=id-GGE_0088-7;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52700 53036 . + . ID=id-GGE_0088-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52721 53012 . + . ID=id-GGE_0088-9;Dbxref=InterPro:IPR000897,PFAM:PF00448;Note=srp54~signal recognition particle%2C srp54 subunit%2C gtpase;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52724 52943 . + . ID=id-GGE_0088-10;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=ffh;locus_tag=GGE_0088 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52454 52937 . - . ID=id-AFQR01000004.1:52454..52937;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52463 53228 . - . ID=id-AFQR01000004.1:52463..53228;Dbxref=InterPro:IPR000897;Note=PatternScan:PS00300~srp54~signal recognition particle%2C srp54 subunit%2C gtpase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52535 53690 . - . ID=id-AFQR01000004.1:52535..53690;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52706 53405 . - . ID=id-AFQR01000004.1:52706..53405;Note=superfamily%3B label: SRP_SPB superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52721 53405 . - . ID=id-AFQR01000004.1:52721..53405;Dbxref=InterPro:IPR004125,PFAM:PF02978;Note=srp_spb~signal recognition particle%2C srp54 subunit%2C m-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52736 53405 . - . ID=id-AFQR01000004.1:52736..53405;Dbxref=InterPro:IPR004125;Note=Gene3D:1.10.260.30~signal recognition particle%2C srp54 subunit%2C m-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 52823 53315 . - . ID=id-AFQR01000004.1:52823..53315;Dbxref=InterPro:IPR004125;Note=superfamily:SSF47446~signal peptide-binding domain~signal recognition particle%2C srp54 subunit%2C m-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53824 53833 . + . ID=id-AFQR01000004.1:53824..53833;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53852 53861 . - . ID=id-AFQR01000004.1:53852..53861;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 53869 54624 . - . ID=gene-GGE_0089;Name=GGE_0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0089 GCA_000222085.2|AFQR01000004.1 Genbank CDS 53869 54624 . - 0 ID=cds-EGT83212.1;Parent=gene-GGE_0089;Dbxref=GeneID:12644452,InterPro:IPR002678,PFAM:PF01784,TIGRFAM:TIGR00486,NCBI_GP:EGT83212.1;Name=EGT83212.1;Note=HI_0105;gbkey=CDS;locus_tag=GGE_0089;product=UPF0135 protein;protein_id=EGT83212.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53869 54622 . - . ID=id-GGE_0089;Dbxref=InterPro:IPR002678,TIGRFAM:TIGR00486;Note=superfamily~multi-dom~superfamily:SSF102705~nif3 (ngg1p interacting factor 3)-like~ngg1p interacting factor 3%2C nif3~ybgi_sa1388: dinuclear metal center prote~ngg1p interacting factor 3%2C nif3%3B label: COG0327;gbkey=misc_feature;locus_tag=GGE_0089 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53869 54571 . - . ID=id-GGE_0089-2;Dbxref=InterPro:IPR002678;Note=HMMPanther:PTHR13799~family not named~ngg1p interacting factor 3%2C nif3;gbkey=misc_feature;locus_tag=GGE_0089 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53887 54568 . - . ID=id-GGE_0089-3;Dbxref=InterPro:IPR002678,PFAM:PF01784;Note=nif3~ngg1p interacting factor 3%2C nif3;gbkey=misc_feature;locus_tag=GGE_0089 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 53908 53962 . + . ID=id-AFQR01000004.1:53908..53962;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 54816 54825 . + . ID=id-AFQR01000004.1:54816..54825;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 55001 55144 . + . ID=gene-GGE_0090;Name=GGE_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0090 GCA_000222085.2|AFQR01000004.1 Genbank CDS 55001 55144 . + 0 ID=cds-EGT83213.1;Parent=gene-GGE_0090;Dbxref=GeneID:1175544,NCBI_GP:EGT83213.1;Name=EGT83213.1;Note=HI_1192;gbkey=CDS;locus_tag=GGE_0090;product=putative lipoprotein;protein_id=EGT83213.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55001 55052 . + . ID=id-GGE_0090;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0090 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55145 55154 . + . ID=id-AFQR01000004.1:55145..55154;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 55219 56094 . - . ID=gene-GGE_0091;Name=GGE_0091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank CDS 55219 56094 . - 0 ID=cds-EGT83214.1;Parent=gene-GGE_0091;Dbxref=GeneID:301155146,InterPro:IPR001638,PFAM:PF00497,NCBI_GP:EGT83214.1;Name=EGT83214.1;Note=CBW14610;Ontology_term=GO:0006810,GO:0030288,GO:0005215;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0091;product=Hypothetical protein;protein_id=EGT83214.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55246 55273 . - . ID=id-GGE_0091;Note=seg;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55255 55999 . - . ID=id-GGE_0091-2;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55345 55732 . - . ID=id-GGE_0091-3;Note=HMMPanther:PTHR18966~family not named;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55381 55879 . - . ID=id-GGE_0091-4;Note=multi-dom%3B label: PBPb;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55384 55873 . - . ID=id-GGE_0091-5;Dbxref=InterPro:IPR001638,PFAM:PF00497;Note=sbp_bac_3~extracellular solute-binding protein%2C family 3;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55384 55870 . - . ID=id-GGE_0091-6;Note=specific~superfamily%3B label: PBP2_LTTR_substrate superfamily;gbkey=misc_feature;locus_tag=GGE_0091 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55321 55933 . + . ID=id-AFQR01000004.1:55321..55933;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 55468 55654 . + . ID=id-AFQR01000004.1:55468..55654;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56039 56048 . + . ID=id-AFQR01000004.1:56039..56048;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 56057 56575 . - . ID=gene-GGE_0092;Name=GGE_0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank CDS 56057 56575 . - 0 ID=cds-EGT83215.1;Parent=gene-GGE_0092;Dbxref=InterPro:IPR003439,InterPro:IPR017871,PFAM:PF00005,NCBI_GP:EGT83215.1;Name=EGT83215.1;Note=Hypothetical aBC transporter-like protein;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||,ATPase activity|0016887||;locus_tag=GGE_0092;product=putative aBC transporter-like protein;protein_id=EGT83215.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56057 56573 . - . ID=id-GGE_0092;Note=HMMPanther:PTHR24220:SF33~subfamily not named~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56057 56525 . - . ID=id-GGE_0092-2;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like~Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56057 56471 . - . ID=id-GGE_0092-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56057 56459 . - . ID=id-GGE_0092-4;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56057 56312 . - . ID=id-GGE_0092-5;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56126 56144 . - . ID=id-GGE_0092-6;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0092 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56102 56228 . + . ID=id-AFQR01000004.1:56102..56228;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 56696 56821 . - . ID=gene-GGE_0093;Name=GGE_0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0093 GCA_000222085.2|AFQR01000004.1 Genbank CDS 56696 56821 . - 0 ID=cds-EGT83216.1;Parent=gene-GGE_0093;Dbxref=NCBI_GP:EGT83216.1;Name=EGT83216.1;Note=Hypothetical p-loop containing nucleoside triphosphate hydrolase;gbkey=CDS;locus_tag=GGE_0093;product=putative p-loop containing nucleoside triphosphate hydrolase;protein_id=EGT83216.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56696 56819 . - . ID=id-GGE_0093;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase~HMMPanther:PTHR24220~family not named;gbkey=misc_feature;locus_tag=GGE_0093 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56702 56816 . - . ID=id-GGE_0093-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0093 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56708 56810 . - . ID=id-GGE_0093-3;Note=superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;locus_tag=GGE_0093 GCA_000222085.2|AFQR01000004.1 Genbank gene 56831 57190 . - . ID=gene-GGE_0094;Name=GGE_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank CDS 56831 57190 . - 0 ID=cds-EGT83217.1;Parent=gene-GGE_0094;Dbxref=InterPro:IPR000515,PFAM:PF00528,NCBI_GP:EGT83217.1;Name=EGT83217.1;Note=Hypothetical binding-protein-dependent transport systems inner membrane component;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0094;product=putative binding-protein-dependent transport systems inner membrane component;protein_id=EGT83217.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56831 57161 . - . ID=id-GGE_0094;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56843 57173 . - . ID=id-GGE_0094-2;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56843 57128 . - . ID=id-GGE_0094-3;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56846 57170 . - . ID=id-GGE_0094-4;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56876 56900 . - . ID=id-GGE_0094-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0094 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56891 57005 . + . ID=id-AFQR01000004.1:56891..57005;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 56900 57092 . + . ID=id-AFQR01000004.1:56900..57092;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 57266 57499 . - . ID=gene-GGE_0095;Name=GGE_0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0095 GCA_000222085.2|AFQR01000004.1 Genbank CDS 57266 57499 . - 0 ID=cds-EGT83218.1;Parent=gene-GGE_0095;Dbxref=InterPro:IPR000515,NCBI_GP:EGT83218.1;Name=EGT83218.1;Note=Hypothetical binding-protein-dependent transport systems inner membrane component;Ontology_term=GO:0006810,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0095;product=putative binding-protein-dependent transport systems inner membrane component;protein_id=EGT83218.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57281 57485 . - . ID=id-GGE_0095;Note=superfamily%3B label: TM_PBP2 superfamily;gbkey=misc_feature;locus_tag=GGE_0095 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57305 57458 . - . ID=id-GGE_0095-2;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0095 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57323 57443 . - . ID=id-GGE_0095-3;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0095 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57326 57335 . - . ID=id-GGE_0095-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0095 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57335 57428 . + . ID=id-AFQR01000004.1:57335..57428;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 57489 58148 . - . ID=gene-GGE_0096;Name=GGE_0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank CDS 57489 58148 . - 0 ID=cds-EGT83219.1;Parent=gene-GGE_0096;Dbxref=GeneID:325576796,InterPro:IPR000515,InterPro:IPR010065,PFAM:PF00528,TIGRFAM:TIGR01726,NCBI_GP:EGT83219.1;Name=EGT83219.1;Note=ZP_08147411;Ontology_term=GO:0006810,GO:0016021,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0096;product=arginine ABC superfamily ATP binding cassette transporter%2C membrane protein;protein_id=EGT83219.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57498 58125 . - . ID=id-GGE_0096;Note=Gene3D:1.10.3720.10;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57516 57786 . - . ID=id-GGE_0096-2;Dbxref=InterPro:IPR010065,TIGRFAM:TIGR01726;Note=heqro_perm_3tm: amino abc transporter%2C~amino acid abc transporter%2C permease protein%2C 3-tm domain%2C his/glu/gln/arg/opine family;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57540 58056 . - . ID=id-GGE_0096-3;Dbxref=InterPro:IPR000515;Note=ProfileScan:PS50928~abc_tm1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57543 57948 . - . ID=id-GGE_0096-4;Note=specific~superfamily%3B label: TM_PBP2;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57552 57558 . - . ID=id-GGE_0096-5;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57585 58035 . - . ID=id-GGE_0096-6;Dbxref=InterPro:IPR000515,PFAM:PF00528;Note=bpd_transp_1~binding-protein-dependent transport systems inner membrane component;gbkey=misc_feature;locus_tag=GGE_0096 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57528 58050 . + . ID=id-AFQR01000004.1:57528..58050;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57549 58056 . + . ID=id-AFQR01000004.1:57549..58056;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57549 57969 . + . ID=id-AFQR01000004.1:57549..57969;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 57558 57882 . + . ID=id-AFQR01000004.1:57558..57882;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 58431 58895 . + . ID=gene-GGE_0097;Name=GGE_0097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0097 GCA_000222085.2|AFQR01000004.1 Genbank CDS 58431 58895 . + 0 ID=cds-EGT83220.1;Parent=gene-GGE_0097;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT83220.1;Name=EGT83220.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_0097;product=transposase like protein;protein_id=EGT83220.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 58446 58824 . + . ID=id-GGE_0097;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0097 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 58449 58824 . + . ID=id-GGE_0097-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0097 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 58476 58788 . + . ID=id-GGE_0097-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_0097 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 58479 58785 . + . ID=id-GGE_0097-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0097 GCA_000222085.2|AFQR01000004.1 Genbank gene 59008 59508 . + . ID=gene-GGE_0098;Name=GGE_0098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0098 GCA_000222085.2|AFQR01000004.1 Genbank CDS 59008 59508 . + 0 ID=cds-EGT83221.1;Parent=gene-GGE_0098;Dbxref=NCBI_GP:EGT83221.1;Name=EGT83221.1;Note=Hypothetical udp-n-acetylmuramoylalanyl-d-glutamyl-2%2C6-diaminopimelate--d-alanyl- d-alanyl ligase;gbkey=CDS;locus_tag=GGE_0098;product=putative udp-n-acetylmuramoylalanyl-d-glutamyl-2%2C6-diaminopimelate--d-alanyl- d-alanyl ligase;protein_id=EGT83221.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 59017 59488 . + . ID=id-GGE_0098;Note=multi-dom%3B label: PRK02471;gbkey=misc_feature;locus_tag=GGE_0098 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 59029 59473 . + . ID=id-GGE_0098-2;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;locus_tag=GGE_0098 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 59203 59296 . + . ID=id-GGE_0098-3;Note=HMMPanther:PTHR23135:SF1~udp-n-acetylmuramoylalanyl-d-glutamyl-2%2C6-diaminopimelate--d-alanyl- d-alanyl ligase~HMMPanther:PTHR23135~family not named;gbkey=misc_feature;locus_tag=GGE_0098 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60051 60117 . + . ID=id-AFQR01000004.1:60051..60117;Note=multi-dom%3B label: PHA02517;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 60312 60638 . - . ID=gene-GGE_0099;Name=GGE_0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank CDS 60312 60638 . - 0 ID=cds-EGT83222.1;Parent=gene-GGE_0099;Dbxref=GeneID:229845392,InterPro:IPR004624,InterPro:IPR013987,InterPro:IPR013988,PFAM:PF03831,PFAM:PF08274,TIGRFAM:TIGR00686,NCBI_GP:EGT83222.1;Name=EGT83222.1;Note=ZP_04465523;gbkey=CDS;locus_tag=GGE_0099;product=putative prokaryotic SH3-related domain-containing protein;protein_id=EGT83222.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60312 60435 . - . ID=id-GGE_0099;Note=Gene3D:2.20.25.10;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60318 60426 . - . ID=id-GGE_0099-2;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60321 60630 . - . ID=id-GGE_0099-3;Dbxref=InterPro:IPR004624,TIGRFAM:TIGR00686;Note=multi-dom~phna: putative alkylphosphonate utilization~phna protein%3B label: phnA;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60321 60402 . - . ID=id-GGE_0099-4;Dbxref=InterPro:IPR013987,PFAM:PF08274;Note=superfamily~phna_zn_ribbon~phna protein%3B label: PhnA_Zn_Ribbon superfamily;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60432 60519 . - . ID=id-GGE_0099-5;Note=superfamily:SSF82057~prokaryotic sh3-related domain;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60444 60507 . - . ID=id-GGE_0099-6;Note=Gene3D:2.30.30.40;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60447 60465 . - . ID=id-GGE_0099-7;Dbxref=InterPro:IPR013988,PFAM:PF03831;Note=superfamily~phna~phna protein%3B label: PhnA superfamily;gbkey=misc_feature;locus_tag=GGE_0099 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60366 60471 . + . ID=id-AFQR01000004.1:60366..60471;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 60742 61296 . + . ID=gene-GGE_0100;Name=GGE_0100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0100 GCA_000222085.2|AFQR01000004.1 Genbank CDS 60742 61296 . + 0 ID=cds-EGT83223.1;Parent=gene-GGE_0100;Dbxref=GeneID:1176921,InterPro:IPR006513,PFAM:PF09695,TIGRFAM:TIGR01626,NCBI_GP:EGT83223.1;Name=EGT83223.1;Note=HI_0045;gbkey=CDS;locus_tag=GGE_0100;product=Hypothetical protein;protein_id=EGT83223.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60742 61294 . + . ID=id-GGE_0100;Dbxref=InterPro:IPR006513,TIGRFAM:TIGR01626;Note=superfamily~ytfj_hi0045: conserved hypothetical prote~conserved hypothetical protein%2C ytfj%3B label: YtfJ_HI0045 superfamily;gbkey=misc_feature;locus_tag=GGE_0100 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 60778 61249 . + . ID=id-GGE_0100-2;Dbxref=InterPro:IPR006513,PFAM:PF09695;Note=ytfj_hi0045~conserved hypothetical protein%2C ytfj;gbkey=misc_feature;locus_tag=GGE_0100 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61141 61150 . + . ID=id-GGE_0100-3;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0100 GCA_000222085.2|AFQR01000004.1 Genbank gene 61624 62286 . + . ID=gene-GGE_0101;Name=GGE_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0101 GCA_000222085.2|AFQR01000004.1 Genbank CDS 61624 62286 . + 0 ID=cds-EGT83224.1;Parent=gene-GGE_0101;Dbxref=GeneID:1175634,InterPro:IPR006213,InterPro:IPR006214,PFAM:PF01027,NCBI_GP:EGT83224.1;Name=EGT83224.1;Note=HI_0044;Ontology_term=GO:0043066,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=negative regulation of apoptosis|0043066||;locus_tag=GGE_0101;product=putative inner membrane protein ycca;protein_id=EGT83224.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61672 62191 . + . ID=id-GGE_0101;Note=specific~superfamily%3B label: BI-1-like;gbkey=misc_feature;locus_tag=GGE_0101 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61675 62236 . + . ID=id-GGE_0101-2;Dbxref=InterPro:IPR006214;Note=HMMPanther:PTHR23291:SF20~inner membrane protein ycca~HMMPanther:PTHR23291~family not named~inhibitor of apoptosis-promoting bax1-related;gbkey=misc_feature;locus_tag=GGE_0101 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61681 62212 . + . ID=id-GGE_0101-3;Dbxref=InterPro:IPR006214,PFAM:PF01027;Note=upf0005~inhibitor of apoptosis-promoting bax1-related;gbkey=misc_feature;locus_tag=GGE_0101 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61687 61693 . + . ID=id-GGE_0101-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0101 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61666 62239 . - . ID=id-AFQR01000004.1:61666..62239;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61666 61780 . - . ID=id-AFQR01000004.1:61666..61780;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61684 61765 . - . ID=id-AFQR01000004.1:61684..61765;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61690 61939 . - . ID=id-AFQR01000004.1:61690..61939;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61693 62206 . - . ID=id-AFQR01000004.1:61693..62206;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61693 62101 . - . ID=id-AFQR01000004.1:61693..62101;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61693 62023 . - . ID=id-AFQR01000004.1:61693..62023;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61693 61843 . - . ID=id-AFQR01000004.1:61693..61843;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 61717 61885 . - . ID=id-AFQR01000004.1:61717..61885;Dbxref=InterPro:IPR006213;Note=PatternScan:PS01243~bi1~bax inhibitor 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 62346 63410 . + . ID=gene-GGE_0102;Name=GGE_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0102 GCA_000222085.2|AFQR01000004.1 Genbank CDS 62346 63410 . + 0 ID=cds-EGT83225.1;Parent=gene-GGE_0102;Dbxref=GeneID:166988515,InterPro:IPR006507,InterPro:IPR021147,PFAM:PF05128,TIGRFAM:TIGR01620,NCBI_GP:EGT83225.1;Name=EGT83225.1;Note=CGSHiGG_02710;gbkey=CDS;locus_tag=GGE_0102;product=UPF0283 membrane protein;protein_id=EGT83225.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62346 63396 . + . ID=id-GGE_0102;Note=multi-dom%3B label: COG3768;gbkey=misc_feature;locus_tag=GGE_0102 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62346 63381 . + . ID=id-GGE_0102-2;Dbxref=InterPro:IPR006507;Note=HAMAP:MF_01085~upf0283~uncharacterised protein family upf0283;gbkey=misc_feature;locus_tag=GGE_0102 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62469 63243 . + . ID=id-GGE_0102-3;Dbxref=InterPro:IPR006507,TIGRFAM:TIGR01620;Note=superfamily~hyp_hi0043: conserved hypothetical protein~uncharacterised protein family upf0283%3B label: DUF697 superfamily;gbkey=misc_feature;locus_tag=GGE_0102 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62382 62526 . - . ID=id-AFQR01000004.1:62382..62526;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62400 62679 . - . ID=id-AFQR01000004.1:62400..62679;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62406 62517 . - . ID=id-AFQR01000004.1:62406..62517;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62415 62973 . - . ID=id-AFQR01000004.1:62415..62973;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62415 62604 . - . ID=id-AFQR01000004.1:62415..62604;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62525 62534 . - . ID=id-AFQR01000004.1:62525..62534;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 62823 62889 . - . ID=id-AFQR01000004.1:62823..62889;Dbxref=InterPro:IPR021147,PFAM:PF05128;Note=duf697~protein of unknown function duf697;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 63410 64084 . + . ID=gene-GGE_0103;Name=GGE_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank CDS 63410 64084 . + 0 ID=cds-EGT83226.1;Parent=gene-GGE_0103;Dbxref=GeneID:1175071,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006508,InterPro:IPR020103,PFAM:PF00849,TIGRFAM:TIGR01621,NCBI_GP:EGT83226.1;Name=EGT83226.1;Note=HI_0042;Ontology_term=GO:0009451,GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||,pseudouridine synthase activity|0009982||;go_process=RNA modification|0009451||,pseudouridine synthesis|0001522||;locus_tag=GGE_0103;product=putative pseudouridine synthase%2C RluA-like protein;protein_id=EGT83226.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63410 63968 . + . ID=id-GGE_0103;Note=HMMPanther:PTHR10436:SF39~pseudouridine synthase~HMMPanther:PTHR10436~rna pseudouridylate synthase family protein;gbkey=misc_feature;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63416 64064 . + . ID=id-GGE_0103-2;Dbxref=InterPro:IPR006508,TIGRFAM:TIGR01621;Note=rlua-like: pseudouridine synthase rlu famil~pseudouridine synthase%2C rlua-like;gbkey=misc_feature;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63419 63962 . + . ID=id-GGE_0103-3;Dbxref=InterPro:IPR020103;Note=superfamily:SSF55120~pseudouridine synthase~pseudouridine synthase%2C catalytic domain;gbkey=misc_feature;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63443 63842 . + . ID=id-GGE_0103-4;Dbxref=InterPro:IPR006145,PFAM:PF00849;Note=pseudou_synth_2~pseudouridine synthase%2C rsua and rlub/c/d/e/f;gbkey=misc_feature;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63446 63932 . + . ID=id-GGE_0103-5;Note=specific~superfamily%3B label: PseudoU_synth superfamily;gbkey=misc_feature;locus_tag=GGE_0103 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 63455 63554 . - . ID=id-AFQR01000004.1:63455..63554;Dbxref=InterPro:IPR006224;Note=PatternScan:PS01129~psi_rlu~pseudouridine synthase%2C rluc/rlud%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 64132 64935 . + . ID=gene-GGE_0104;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=GGE_0104 GCA_000222085.2|AFQR01000004.1 Genbank CDS 64132 64935 . + 0 ID=cds-EGT83227.1;Parent=gene-GGE_0104;Dbxref=GeneID:1169570,InterPro:IPR000097,InterPro:IPR004808,InterPro:IPR005135,InterPro:IPR020847,InterPro:IPR020848,PFAM:PF03372,TIGRFAM:TIGR00195,TIGRFAM:TIGR00633,NCBI_GP:EGT83227.1;Name=EGT83227.1;Ontology_term=GO:0006281,GO:0005622,GO:0003677,GO:0004519,GO:0004518;gbkey=CDS;gene=xthA;go_component=intracellular|0005622||;go_function=DNA binding|0003677||,endonuclease activity|0004519||,nuclease activity|0004518||;go_process=DNA repair|0006281||;locus_tag=GGE_0104;product=Exodeoxyribonuclease III;protein_id=EGT83227.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64132 64933 . + . ID=id-GGE_0104;Dbxref=InterPro:IPR004808,InterPro:IPR005135,TIGRFAM:TIGR00633;Note=superfamily~ProfileScan:PS51435~ap_nuclease_f1_4~exodeoxyribonuclease iii xth~Gene3D:3.60.10.10~superfamily:SSF56219~dnase i-like~endonuclease/exonuclease/phosphatase~HMMPanther:PTHR22748~family not named~exodeoxyribonuclease iii xth~xth: exodeoxyribonuclease iii (xth)~exodeoxyribonuclease iii xth%3B label: Exo_endo_phos superfamily;gbkey=misc_feature;gene=xthA;locus_tag=GGE_0104 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64132 64930 . + . ID=id-GGE_0104-2;Dbxref=InterPro:IPR000097,InterPro:IPR005135,PFAM:PF03372,TIGRFAM:TIGR00195;Note=exo_endo_phos~endonuclease/exonuclease/phosphatase~exodnase_iii: exodeoxyribonuclease iii~ap endonuclease%2C family 1;gbkey=misc_feature;gene=xthA;locus_tag=GGE_0104 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64162 64213 . - . ID=id-AFQR01000004.1:64162..64213;Dbxref=InterPro:IPR020847;Note=PatternScan:PS00726~ap_nuclease_f1_1~ap endonuclease%2C family 1%2C binding site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64168 64801 . - . ID=id-AFQR01000004.1:64168..64801;Dbxref=InterPro:IPR020848;Note=PatternScan:PS00728~ap_nuclease_f1_3~ap endonuclease%2C family 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64183 64723 . - . ID=id-AFQR01000004.1:64183..64723;Dbxref=InterPro:IPR020848;Note=PatternScan:PS00727~ap_nuclease_f1_2~ap endonuclease%2C family 1%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 64945 65721 . + . ID=gene-GGE_0105;Name=GGE_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank CDS 64945 65721 . + 0 ID=cds-EGT83228.1;Parent=gene-GGE_0105;Dbxref=GeneID:1175069,InterPro:IPR006506,InterPro:IPR009671,InterPro:IPR016097,PFAM:PF05117,PFAM:PF06877,PIR:PIRSF017962,TIGRFAM:TIGR01619,NCBI_GP:EGT83228.1;Name=EGT83228.1;Note=HI_0040;gbkey=CDS;locus_tag=GGE_0105;product=Hypothetical protein;protein_id=EGT83228.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64945 65719 . + . ID=id-GGE_0105;Dbxref=InterPro:IPR006506,PIR:PIRSF017962;Note=uncharacterised conserved protein%2C ucp017962 type~conserved hypothetical protein chp01619;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64951 65692 . + . ID=id-GGE_0105-2;Dbxref=InterPro:IPR006506,TIGRFAM:TIGR01619;Note=multi-dom~hyp_hi0040: conserved hypothetical protein~conserved hypothetical protein chp01619%3B label: hyp_HI0040;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64951 65338 . + . ID=id-GGE_0105-3;Note=superfamily%3B label: DUF695 superfamily;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 64954 65335 . + . ID=id-GGE_0105-4;Dbxref=InterPro:IPR016097,PFAM:PF05117;Note=duf695~domain of unknown function duf695;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65314 65353 . + . ID=id-GGE_0105-5;Dbxref=InterPro:IPR009671;Note=superfamily:SSF89946~hypothetical protein vc0424~domain of unknown function duf1260;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65317 65323 . + . ID=id-GGE_0105-6;Dbxref=InterPro:IPR009671;Note=Gene3D:3.30.70.970~domain of unknown function duf1260;gbkey=misc_feature;locus_tag=GGE_0105 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65011 65365 . - . ID=id-AFQR01000004.1:65011..65365;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65272 65362 . - . ID=id-AFQR01000004.1:65272..65362;Dbxref=InterPro:IPR009671,PFAM:PF06877;Note=superfamily~duf1260~domain of unknown function duf1260%3B label: DUF1260 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 65772 66260 . - . ID=gene-GGE_0106;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=GGE_0106 GCA_000222085.2|AFQR01000004.1 Genbank CDS 65772 66260 . - 0 ID=cds-EGT83229.1;Parent=gene-GGE_0106;Dbxref=InterPro:IPR007227,PFAM:PF04093,TIGRFAM:TIGR03426,NCBI_GP:EGT83229.1;Name=EGT83229.1;Ontology_term=GO:0008360,GO:0016021;gbkey=CDS;gene=mreD;go_component=integral to membrane|0016021||;go_process=regulation of cell shape|0008360||;locus_tag=GGE_0106;product=Rod shape-determining protein mreD;protein_id=EGT83229.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65781 66228 . - . ID=id-GGE_0106;Dbxref=InterPro:IPR007227,PFAM:PF04093;Note=mred~cell shape-determining protein mred;gbkey=misc_feature;gene=mreD;locus_tag=GGE_0106 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65787 65841 . - . ID=id-GGE_0106-2;Note=transmembrane_regions;gbkey=misc_feature;gene=mreD;locus_tag=GGE_0106 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65793 66216 . - . ID=id-GGE_0106-3;Dbxref=InterPro:IPR007227,TIGRFAM:TIGR03426;Note=shape_mred: rod shape-determining protein~cell shape-determining protein mred;gbkey=misc_feature;gene=mreD;locus_tag=GGE_0106 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65799 66222 . - . ID=id-GGE_0106-4;Note=superfamily%3B label: MreD superfamily;gbkey=misc_feature;gene=mreD;locus_tag=GGE_0106 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65805 65886 . + . ID=id-AFQR01000004.1:65805..65886;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65832 66072 . + . ID=id-AFQR01000004.1:65832..66072;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65841 66159 . + . ID=id-AFQR01000004.1:65841..66159;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65841 65970 . + . ID=id-AFQR01000004.1:65841..65970;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 65841 65889 . + . ID=id-AFQR01000004.1:65841..65889;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 66260 67315 . - . ID=gene-GGE_0107;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=GGE_0107 GCA_000222085.2|AFQR01000004.1 Genbank CDS 66260 67315 . - 0 ID=cds-EGT83230.1;Parent=gene-GGE_0107;Dbxref=InterPro:IPR005223,InterPro:IPR007221,PFAM:PF04085,TIGRFAM:TIGR00219,NCBI_GP:EGT83230.1;Name=EGT83230.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||;locus_tag=GGE_0107;product=Rod shape-determining protein mreC;protein_id=EGT83230.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66260 67118 . - . ID=id-GGE_0107;Dbxref=InterPro:IPR005223,TIGRFAM:TIGR00219;Note=mrec: rod shape-determining protein mrec~rod shape-determining protein mrec%2C subtype;gbkey=misc_feature;gene=mreC;locus_tag=GGE_0107 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66275 67106 . - . ID=id-GGE_0107-2;Note=multi-dom%3B label: mreC;gbkey=misc_feature;gene=mreC;locus_tag=GGE_0107 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66623 66719 . - . ID=id-GGE_0107-3;Note=superfamily%3B label: MreC superfamily;gbkey=misc_feature;gene=mreC;locus_tag=GGE_0107 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66623 66716 . - . ID=id-GGE_0107-4;Dbxref=InterPro:IPR007221,PFAM:PF04085;Note=mrec~rod shape-determining protein mrec;gbkey=misc_feature;gene=mreC;locus_tag=GGE_0107 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66302 66305 . + . ID=id-AFQR01000004.1:66302..66305;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 66326 66470 . + . ID=id-AFQR01000004.1:66326..66470;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67351 67360 . + . ID=id-AFQR01000004.1:67351..67360;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67368 67377 . - . ID=id-AFQR01000004.1:67368..67377;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 67395 68450 . - . ID=gene-GGE_0108;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank CDS 67395 68450 . - 0 ID=cds-EGT83231.1;Parent=gene-GGE_0108;Dbxref=GeneID:1171018,InterPro:IPR001023,InterPro:IPR004753,PFAM:PF06723,TIGRFAM:TIGR00904,NCBI_GP:EGT83231.1;Name=EGT83231.1;Ontology_term=GO:0000902,GO:0005524;gbkey=CDS;gene=mreB;go_function=ATP binding|0005524||;go_process=cell morphogenesis|0000902||;locus_tag=GGE_0108;product=Rod shape-determining protein mreB;protein_id=EGT83231.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67404 68277 . - . ID=id-GGE_0108;Dbxref=InterPro:IPR001023;Note=HMMPanther:PTHR19375:SF121~subfamily not named~HMMPanther:PTHR19375~family not named~heat shock protein hsp70;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67416 68421 . - . ID=id-GGE_0108-2;Note=multi-dom%3B label: PRK13927;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67422 67830 . - . ID=id-GGE_0108-3;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67425 68400 . - . ID=id-GGE_0108-4;Dbxref=InterPro:IPR004753,TIGRFAM:TIGR00904;Note=mreb: cell shape determining protein%2C mreb/m~cell shape determining protein mreb/mrl;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67428 67860 . - . ID=id-GGE_0108-5;Note=Gene3D:3.30.420.40;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67431 68385 . - . ID=id-GGE_0108-6;Dbxref=InterPro:IPR004753,PFAM:PF06723;Note=mreb_mbl~cell shape determining protein mreb/mrl;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67857 67983 . - . ID=id-GGE_0108-7;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=mreB;locus_tag=GGE_0108 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67452 67554 . + . ID=id-AFQR01000004.1:67452..67554;Dbxref=InterPro:IPR004753;Note=FPrintScan:PR01652~shapeprotein~cell shape determining protein mreb/mrl;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67455 67806 . + . ID=id-AFQR01000004.1:67455..67806;Dbxref=InterPro:IPR004753;Note=FPrintScan:PR01652~shapeprotein~cell shape determining protein mreb/mrl;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67458 67971 . + . ID=id-AFQR01000004.1:67458..67971;Dbxref=InterPro:IPR004753;Note=FPrintScan:PR01652~shapeprotein~cell shape determining protein mreb/mrl;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67467 67614 . + . ID=id-AFQR01000004.1:67467..67614;Dbxref=InterPro:IPR004753;Note=FPrintScan:PR01652~shapeprotein~cell shape determining protein mreb/mrl;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67476 68316 . + . ID=id-AFQR01000004.1:67476..68316;Dbxref=InterPro:IPR004753;Note=FPrintScan:PR01652~shapeprotein~cell shape determining protein mreb/mrl;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67563 68202 . + . ID=id-AFQR01000004.1:67563..68202;Note=Gene3D:3.30.420.40;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67563 67641 . + . ID=id-AFQR01000004.1:67563..67641;Note=superfamily%3B label: PRK10039 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67620 67971 . + . ID=id-AFQR01000004.1:67620..67971;Note=Gene3D:3.90.640.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 67854 67887 . + . ID=id-AFQR01000004.1:67854..67887;Note=superfamily%3B label: FtsA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 68584 70425 . - . ID=gene-GGE_0109;Name=GGE_0109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank CDS 68584 70425 . - 0 ID=cds-EGT83232.1;Parent=gene-GGE_0109;Dbxref=GeneID:2492566,InterPro:IPR003439,InterPro:IPR010509,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF06472,NCBI_GP:EGT83232.1;Name=EGT83232.1;Note=HI_0036;Ontology_term=GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0005524,GO:0042626,GO:0016887;gbkey=CDS;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||;go_process=transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0109;product=putative triphosphate hydrolase-like protein;protein_id=EGT83232.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68614 68653 . - . ID=id-GGE_0109;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68623 70321 . - . ID=id-GGE_0109-2;Note=multi-dom%3B label: COG4178;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68686 70321 . - . ID=id-GGE_0109-3;Note=multi-dom%3B label: COG4178;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68692 69448 . - . ID=id-GGE_0109-4;Dbxref=InterPro:IPR010509,PFAM:PF06472;Note=superfamily~abc_membrane_2~abc transporter%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68755 69448 . - . ID=id-GGE_0109-5;Dbxref=InterPro:IPR010509,PFAM:PF06472;Note=superfamily~abc_membrane_2~abc transporter%3B label: ABC_membrane superfamily;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68761 69484 . - . ID=id-GGE_0109-6;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68770 69571 . - . ID=id-GGE_0109-7;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68779 70168 . - . ID=id-GGE_0109-8;Note=HMMPanther:PTHR11384:SF20~blr7537 protein~HMMPanther:PTHR11384~family not named;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68824 69484 . - . ID=id-GGE_0109-9;Dbxref=InterPro:IPR017940;Note=ProfileScan:PS50929~abc_tm1f~abc transporter%2C integral membrane type 1;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68833 69571 . - . ID=id-GGE_0109-10;Dbxref=InterPro:IPR011527;Note=superfamily:SSF90123~abc transporter transmembrane region~abc transporter%2C transmembrane domain%2C type 1;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68842 70168 . - . ID=id-GGE_0109-11;Note=HMMPanther:PTHR11384:SF20~blr7537 protein~HMMPanther:PTHR11384~family not named;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70399 70408 . - . ID=id-GGE_0109-12;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0109 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68626 68974 . + . ID=id-AFQR01000004.1:68626..68974;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68626 68911 . + . ID=id-AFQR01000004.1:68626..68911;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68629 70186 . + . ID=id-AFQR01000004.1:68629..70186;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68629 70123 . + . ID=id-AFQR01000004.1:68629..70123;Dbxref=InterPro:IPR017871;Note=PatternScan:PS00211~abc_transporter_1~abc transporter%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68644 68824 . + . ID=id-AFQR01000004.1:68644..68824;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68644 68761 . + . ID=id-AFQR01000004.1:68644..68761;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69544 . + . ID=id-AFQR01000004.1:68653..69544;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69481 . + . ID=id-AFQR01000004.1:68653..69481;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69280 . + . ID=id-AFQR01000004.1:68653..69280;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69217 . + . ID=id-AFQR01000004.1:68653..69217;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69184 . + . ID=id-AFQR01000004.1:68653..69184;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 69121 . + . ID=id-AFQR01000004.1:68653..69121;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 68941 . + . ID=id-AFQR01000004.1:68653..68941;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 68878 . + . ID=id-AFQR01000004.1:68653..68878;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68653 68680 . + . ID=id-AFQR01000004.1:68653..68680;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68917 69940 . + . ID=id-AFQR01000004.1:68917..69940;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 68917 69877 . + . ID=id-AFQR01000004.1:68917..69877;Dbxref=InterPro:IPR003439,PFAM:PF00005;Note=abc_tran~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69136 69820 . + . ID=id-AFQR01000004.1:69136..69820;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69136 69757 . + . ID=id-AFQR01000004.1:69136..69757;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69181 69820 . + . ID=id-AFQR01000004.1:69181..69820;Note=specific~superfamily%3B label: ABCD_peroxisomal_ALDP;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69181 69757 . + . ID=id-AFQR01000004.1:69181..69757;Note=specific~superfamily%3B label: ABCD_peroxisomal_ALDP;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69190 69820 . + . ID=id-AFQR01000004.1:69190..69820;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69190 69757 . + . ID=id-AFQR01000004.1:69190..69757;Dbxref=InterPro:IPR003439;Note=ProfileScan:PS50893~abc_transporter_2~abc transporter-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69247 69757 . + . ID=id-AFQR01000004.1:69247..69757;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 69247 69694 . + . ID=id-AFQR01000004.1:69247..69694;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70381 70390 . + . ID=id-AFQR01000004.1:70381..70390;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 70569 72224 . + . ID=gene-GGE_0110;Name=GGE_0110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank CDS 70569 72224 . + 0 ID=cds-EGT83233.1;Parent=gene-GGE_0110;Dbxref=GeneID:81336986,InterPro:IPR006037,InterPro:IPR006512,InterPro:IPR023018,PFAM:PF02080,PFAM:PF06826,TIGRFAM:TIGR01625,NCBI_GP:EGT83233.1;Name=EGT83233.1;Note=NTHI0043;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||;go_process=potassium ion transport|0006813||;locus_tag=GGE_0110;product=Putative transport protein;protein_id=EGT83233.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70569 72222 . + . ID=id-GGE_0110;Dbxref=InterPro:IPR023018;Note=multi-dom~HAMAP:MF_01016~yide~transport protein yide%2C putative%3B label: PRK03818;gbkey=misc_feature;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70581 70626 . + . ID=id-GGE_0110-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70602 71076 . + . ID=id-GGE_0110-3;Note=superfamily%3B label: Asp-Al_Ex superfamily;gbkey=misc_feature;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70602 71073 . + . ID=id-GGE_0110-4;Dbxref=InterPro:IPR006512,PFAM:PF06826;Note=asp-al_ex~yide/ybjl duplication;gbkey=misc_feature;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70614 71022 . + . ID=id-GGE_0110-5;Dbxref=InterPro:IPR006512,TIGRFAM:TIGR01625;Note=yide_ybjl_dupl: aspt/yide/ybjl antipor~yide/ybjl duplication;gbkey=misc_feature;locus_tag=GGE_0110 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70599 71694 . - . ID=id-AFQR01000004.1:70599..71694;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70617 70653 . - . ID=id-AFQR01000004.1:70617..70653;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70623 70656 . - . ID=id-AFQR01000004.1:70623..70656;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70626 71754 . - . ID=id-AFQR01000004.1:70626..71754;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 72150 . - . ID=id-AFQR01000004.1:70638..72150;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 72039 . - . ID=id-AFQR01000004.1:70638..72039;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 71958 . - . ID=id-AFQR01000004.1:70638..71958;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 71862 . - . ID=id-AFQR01000004.1:70638..71862;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 71775 . - . ID=id-AFQR01000004.1:70638..71775;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 71679 . - . ID=id-AFQR01000004.1:70638..71679;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 71046 . - . ID=id-AFQR01000004.1:70638..71046;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 70839 . - . ID=id-AFQR01000004.1:70638..70839;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70638 70752 . - . ID=id-AFQR01000004.1:70638..70752;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70758 71205 . - . ID=id-AFQR01000004.1:70758..71205;Dbxref=InterPro:IPR006037,PFAM:PF02080;Note=superfamily~trka_c~regulator of k+ conductance%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70773 71442 . - . ID=id-AFQR01000004.1:70773..71442;Dbxref=InterPro:IPR006037,PFAM:PF02080;Note=trka_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70779 71439 . - . ID=id-AFQR01000004.1:70779..71439;Note=superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70821 71400 . - . ID=id-AFQR01000004.1:70821..71400;Dbxref=InterPro:IPR006037;Note=ProfileScan:PS51202~rck_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70824 71142 . - . ID=id-AFQR01000004.1:70824..71142;Dbxref=InterPro:IPR006037;Note=ProfileScan:PS51202~rck_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70824 71139 . - . ID=id-AFQR01000004.1:70824..71139;Note=superfamily:SSF116726~trka c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 70845 71376 . - . ID=id-AFQR01000004.1:70845..71376;Note=superfamily:SSF116726~trka c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 71013 71724 . - . ID=id-AFQR01000004.1:71013..71724;Note=superfamily%3B label: Asp-Al_Ex superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 71037 71700 . - . ID=id-AFQR01000004.1:71037..71700;Dbxref=InterPro:IPR006512,TIGRFAM:TIGR01625;Note=yide_ybjl_dupl: aspt/yide/ybjl antipor~yide/ybjl duplication;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 71088 71688 . - . ID=id-AFQR01000004.1:71088..71688;Dbxref=InterPro:IPR006512,PFAM:PF06826;Note=asp-al_ex~yide/ybjl duplication;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 72350 72658 . + . ID=gene-GGE_0111;Name=GGE_0111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0111 GCA_000222085.2|AFQR01000004.1 Genbank CDS 72350 72658 . + 0 ID=cds-EGT83234.1;Parent=gene-GGE_0111;Dbxref=GeneID:1175561,InterPro:IPR004394,PFAM:PF02410,TIGRFAM:TIGR00090,NCBI_GP:EGT83234.1;Name=EGT83234.1;Note=HI_0034;gbkey=CDS;locus_tag=GGE_0111;product=putative ribosome-associated%2C Iojap-like protein;protein_id=EGT83234.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72350 72656 . + . ID=id-GGE_0111;Dbxref=InterPro:IPR004394;Note=HMMPanther:PTHR21043~family not named~ribosome-associated%2C iojap-like;gbkey=misc_feature;locus_tag=GGE_0111 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72356 72650 . + . ID=id-GGE_0111-2;Note=Gene3D:3.30.460.10;gbkey=misc_feature;locus_tag=GGE_0111 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72359 72647 . + . ID=id-GGE_0111-3;Dbxref=InterPro:IPR004394,TIGRFAM:TIGR00090;Note=superfamily~iojap_ybeb: iojap-like ribosome-associated~ribosome-associated%2C iojap-like%3B label: DUF143 superfamily;gbkey=misc_feature;locus_tag=GGE_0111 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72362 72644 . + . ID=id-GGE_0111-4;Dbxref=InterPro:IPR004394,PFAM:PF02410;Note=duf143~ribosome-associated%2C iojap-like;gbkey=misc_feature;locus_tag=GGE_0111 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72666 72675 . + . ID=id-AFQR01000004.1:72666..72675;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72684 72693 . - . ID=id-AFQR01000004.1:72684..72693;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 72712 73179 . + . ID=gene-GGE_0112;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank CDS 72712 73179 . + 0 ID=cds-EGT83235.1;Parent=gene-GGE_0112;Dbxref=GeneID:1175560,InterPro:IPR003742,InterPro:IPR016051,PFAM:PF02590,PIR:PIRSF004505,TIGRFAM:TIGR00246,NCBI_GP:EGT83235.1;Name=EGT83235.1;Ontology_term=GO:0031167,GO:0006364,GO:0005737,GO:0008168;gbkey=CDS;gene=rlmH;go_component=cytoplasm|0005737||;go_function=methyltransferase activity|0008168||;go_process=rRNA methylation|0031167||,rRNA processing|0006364||;locus_tag=GGE_0112;product=Ribosomal RNA large subunit methyltransferase H;protein_id=EGT83235.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72712 73177 . + . ID=id-GGE_0112;Dbxref=InterPro:IPR016051,TIGRFAM:TIGR00246;Note=trna_rlmh_ybea: rrna large subunit m3p~ribosomal rna large subunit methyltransferase h;gbkey=misc_feature;gene=rlmH;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72712 73174 . + . ID=id-GGE_0112-2;Dbxref=InterPro:IPR003742;Note=HAMAP:MF_00658~23srrna_methyltr_h~spout methyltransferase%2C predicted;gbkey=misc_feature;gene=rlmH;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72712 73171 . + . ID=id-GGE_0112-3;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;gene=rlmH;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72718 73171 . + . ID=id-GGE_0112-4;Dbxref=InterPro:IPR003742,PIR:PIRSF004505;Note=superfamily~predicted methyltransferase%2C bacterial type~spout methyltransferase%2C predicted~Gene3D:3.40.1280.10%3B label: SPOUT_MTase superfamily;gbkey=misc_feature;gene=rlmH;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 72718 73168 . + . ID=id-GGE_0112-5;Dbxref=InterPro:IPR003742,PFAM:PF02590;Note=spout_mtase~spout methyltransferase%2C predicted;gbkey=misc_feature;gene=rlmH;locus_tag=GGE_0112 GCA_000222085.2|AFQR01000004.1 Genbank gene 73201 75156 . + . ID=gene-GGE_0113;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank CDS 73201 75156 . + 0 ID=cds-EGT83236.1;Parent=gene-GGE_0113;Dbxref=GeneID:1172028,InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,InterPro:IPR017790,PFAM:PF00905,PFAM:PF03717,TIGRFAM:TIGR03423,NCBI_GP:EGT83236.1;Name=EGT83236.1;Ontology_term=GO:0009252,GO:0009273,GO:0016020,GO:0008658;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||;go_function=penicillin binding|0008658||;go_process=peptidoglycan biosynthetic process|0009252||,peptidoglycan-based cell wall biogenesis|0009273||;locus_tag=GGE_0113;product=Penicillin-binding protein 2;protein_id=EGT83236.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73282 74992 . + . ID=id-GGE_0113;Dbxref=InterPro:IPR017790,TIGRFAM:TIGR03423;Note=pbp2_mrda: penicillin-binding protein~penicillin-binding protein 2;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73282 74986 . + . ID=id-GGE_0113-2;Note=multi-dom%3B label: pbp2_mrdA;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73393 73795 . + . ID=id-GGE_0113-3;Dbxref=InterPro:IPR005311;Note=superfamily:SSF56519~penicillin binding protein dimerization domain~penicillin-binding protein%2C dimerization domain;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73417 73726 . + . ID=id-GGE_0113-4;Dbxref=InterPro:IPR005311,PFAM:PF03717;Note=pbp_dimer~penicillin-binding protein%2C dimerization domain;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73417 73723 . + . ID=id-GGE_0113-5;Note=superfamily%3B label: PBP_dimer superfamily;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73984 74290 . + . ID=id-GGE_0113-6;Note=Gene3D:3.40.710.10;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73987 74290 . + . ID=id-GGE_0113-7;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 74038 74221 . + . ID=id-GGE_0113-8;Dbxref=InterPro:IPR001460,PFAM:PF00905;Note=superfamily~transpeptidase~penicillin-binding protein%2C transpeptidase%3B label: Transpeptidase superfamily;gbkey=misc_feature;gene=mrdA;locus_tag=GGE_0113 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73270 73291 . - . ID=id-AFQR01000004.1:73270..73291;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73519 73528 . - . ID=id-AFQR01000004.1:73519..73528;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 73573 73612 . - . ID=id-AFQR01000004.1:73573..73612;Note=Gene3D:3.90.1310.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 75146 76261 . + . ID=gene-GGE_0114;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=GGE_0114 GCA_000222085.2|AFQR01000004.1 Genbank CDS 75146 76261 . + 0 ID=cds-EGT83237.1;Parent=gene-GGE_0114;Dbxref=GeneID:1173119,InterPro:IPR001182,InterPro:IPR011923,InterPro:IPR018365,PFAM:PF01098,TIGRFAM:TIGR02210,NCBI_GP:EGT83237.1;Name=EGT83237.1;Ontology_term=GO:0007049,GO:0008360,GO:0016021;gbkey=CDS;gene=mrdB;go_component=integral to membrane|0016021||;go_process=cell cycle|0007049||,regulation of cell shape|0008360||;locus_tag=GGE_0114;product=Rod shape-determining protein rodA;protein_id=EGT83237.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75179 76223 . + . ID=id-GGE_0114;Note=superfamily%3B label: FTSW_RODA_SPOVE superfamily;gbkey=misc_feature;gene=mrdB;locus_tag=GGE_0114 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75200 76190 . + . ID=id-GGE_0114-2;Dbxref=InterPro:IPR001182,InterPro:IPR011923,PFAM:PF01098,TIGRFAM:TIGR02210;Note=ftsw_roda_spove~cell cycle protein~roda_shape: rod shape-determining protein~rod shape-determining protein roda;gbkey=misc_feature;gene=mrdB;locus_tag=GGE_0114 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75203 75215 . + . ID=id-GGE_0114-3;Note=transmembrane_regions;gbkey=misc_feature;gene=mrdB;locus_tag=GGE_0114 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75188 75974 . - . ID=id-AFQR01000004.1:75188..75974;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75200 75299 . - . ID=id-AFQR01000004.1:75200..75299;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75206 75629 . - . ID=id-AFQR01000004.1:75206..75629;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75206 75560 . - . ID=id-AFQR01000004.1:75206..75560;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75206 75371 . - . ID=id-AFQR01000004.1:75206..75371;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75215 76163 . - . ID=id-AFQR01000004.1:75215..76163;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75215 76067 . - . ID=id-AFQR01000004.1:75215..76067;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75215 75965 . - . ID=id-AFQR01000004.1:75215..75965;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75215 75692 . - . ID=id-AFQR01000004.1:75215..75692;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75215 75473 . - . ID=id-AFQR01000004.1:75215..75473;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 75221 76112 . - . ID=id-AFQR01000004.1:75221..76112;Dbxref=InterPro:IPR018365;Note=PatternScan:PS00428~ftsw_roda_spove~cell cycle%2C ftsw / roda / spove%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 76313 77176 . + . ID=gene-GGE_0115;Name=GGE_0115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank CDS 76313 77176 . + 0 ID=cds-EGT83238.1;Parent=gene-GGE_0115;Dbxref=InterPro:IPR007730,InterPro:IPR009009,InterPro:IPR012997,PFAM:PF03330,PFAM:PF05036,TIGRFAM:TIGR00413,NCBI_GP:EGT83238.1;Name=EGT83238.1;Note=HI_0030;gbkey=CDS;locus_tag=GGE_0115;product=RlpA-like protein;protein_id=EGT83238.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76463 76658 . + . ID=id-GGE_0115;Dbxref=InterPro:IPR009009;Note=superfamily:SSF50685~barwin-like endoglucanases~barwin-related endoglucanase;gbkey=misc_feature;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76526 76577 . + . ID=id-GGE_0115-2;Dbxref=InterPro:IPR009009,PFAM:PF03330;Note=dpbb_1~barwin-related endoglucanase;gbkey=misc_feature;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76529 76943 . + . ID=id-GGE_0115-3;Dbxref=InterPro:IPR012997,TIGRFAM:TIGR00413;Note=rlpa: rare lipoprotein a~rare lipoprotein a%2C bacterial;gbkey=misc_feature;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76529 76931 . + . ID=id-GGE_0115-4;Note=multi-dom%3B label: rlpA;gbkey=misc_feature;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76529 76577 . + . ID=id-GGE_0115-5;Note=superfamily%3B label: DPBB_1 superfamily;gbkey=misc_feature;locus_tag=GGE_0115 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76339 76348 . - . ID=id-AFQR01000004.1:76339..76348;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76361 76832 . - . ID=id-AFQR01000004.1:76361..76832;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76517 76958 . - . ID=id-AFQR01000004.1:76517..76958;Dbxref=InterPro:IPR007730;Note=Gene3D:3.30.70.1070~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76523 76952 . - . ID=id-AFQR01000004.1:76523..76952;Dbxref=InterPro:IPR007730,PFAM:PF05036;Note=spor~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76529 76946 . - . ID=id-AFQR01000004.1:76529..76946;Note=superfamily%3B label: SPOR superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 76544 76943 . - . ID=id-AFQR01000004.1:76544..76943;Dbxref=InterPro:IPR007730;Note=superfamily:SSF110997~sporulation related repeat~sporulation-related domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 77192 78373 . + . ID=gene-GGE_0116;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank CDS 77192 78373 . + 0 ID=cds-EGT83239.1;Parent=gene-GGE_0116;Dbxref=GeneID:1169208,InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR012907,InterPro:IPR015956,InterPro:IPR018044,PFAM:PF00768,PFAM:PF07943,NCBI_GP:EGT83239.1;Name=EGT83239.1;Ontology_term=GO:0006508,GO:0004180,GO:0009002;gbkey=CDS;gene=dacA;go_function=carboxypeptidase activity|0004180||,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||;go_process=proteolysis|0006508||;locus_tag=GGE_0116;product=D-alanyl-D-alanine carboxypeptidase dacA;protein_id=EGT83239.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77192 78038 . + . ID=id-GGE_0116;Dbxref=InterPro:IPR012338;Note=superfamily:SSF56601~beta-lactamase/transpeptidase-like~beta-lactamase-type transpeptidase fold;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77204 78341 . + . ID=id-GGE_0116-2;Note=multi-dom%3B label: PRK10793;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77219 77897 . + . ID=id-GGE_0116-3;Note=superfamily%3B label: Beta-lactamase superfamily;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77279 77894 . + . ID=id-GGE_0116-4;Dbxref=InterPro:IPR001967,PFAM:PF00768;Note=peptidase_s11~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77282 77945 . + . ID=id-GGE_0116-5;Note=Gene3D:3.40.710.10;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77291 77948 . + . ID=id-GGE_0116-6;Note=HMMPanther:PTHR21581~family not named;gbkey=misc_feature;gene=dacA;locus_tag=GGE_0116 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77228 77384 . - . ID=id-AFQR01000004.1:77228..77384;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77234 77633 . - . ID=id-AFQR01000004.1:77234..77633;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77246 77552 . - . ID=id-AFQR01000004.1:77246..77552;Dbxref=InterPro:IPR018044;Note=FPrintScan:PR00725~dadacbptase1~peptidase s11%2C d-alanyl-d-alanine carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77465 78038 . - . ID=id-AFQR01000004.1:77465..78038;Dbxref=InterPro:IPR012907,PFAM:PF07943;Note=pbp5_c~peptidase s11%2C d-ala-d-ala carboxypeptidase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77468 78038 . - . ID=id-AFQR01000004.1:77468..78038;Dbxref=InterPro:IPR012907;Note=superfamily~Gene3D:2.60.410.10~peptidase s11%2C d-ala-d-ala carboxypeptidase a%3B label: PBP5_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 77474 78038 . - . ID=id-AFQR01000004.1:77474..78038;Dbxref=InterPro:IPR015956;Note=superfamily:SSF69189~penicillin-binding protein associated domain~penicillin-binding protein-associated;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78388 78397 . - . ID=id-AFQR01000004.1:78388..78397;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 78470 78748 . + . ID=gene-GGE_0117;Name=GGE_0117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0117 GCA_000222085.2|AFQR01000004.1 Genbank CDS 78470 78748 . + 0 ID=cds-EGT83240.1;Parent=gene-GGE_0117;Dbxref=GeneID:166988626,InterPro:IPR007454,PFAM:PF04359,NCBI_GP:EGT83240.1;Name=EGT83240.1;Note=CGSHiEE_03170;gbkey=CDS;locus_tag=GGE_0117;product=UPF0250 protein;protein_id=EGT83240.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78485 78734 . + . ID=id-GGE_0117;Note=superfamily%3B label: DUF493 superfamily;gbkey=misc_feature;locus_tag=GGE_0117 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78488 78731 . + . ID=id-GGE_0117-2;Dbxref=InterPro:IPR007454;Note=HAMAP:MF_00659~upf0250~uncharacterised protein family upf0250~superfamily:SSF117991~ybed-like;gbkey=misc_feature;locus_tag=GGE_0117 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78497 78722 . + . ID=id-GGE_0117-3;Dbxref=InterPro:IPR007454,PFAM:PF04359;Note=duf493~uncharacterised protein family upf0250;gbkey=misc_feature;locus_tag=GGE_0117 GCA_000222085.2|AFQR01000004.1 Genbank gene 78750 79388 . + . ID=gene-GGE_0118;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank CDS 78750 79388 . + 0 ID=cds-EGT83241.1;Parent=gene-GGE_0118;Dbxref=GeneID:166230459,InterPro:IPR000544,InterPro:IPR002033,InterPro:IPR004143,InterPro:IPR004473,InterPro:IPR006935,InterPro:IPR007401,InterPro:IPR007409,InterPro:IPR011664,InterPro:IPR014001,InterPro:IPR017034,InterPro:IPR019820,InterPro:IPR019822,InterPro:IPR020605,InterPro:IPR022625,PFAM:PF00902,PFAM:PF03099,PFAM:PF04304,PFAM:PF04313,PFAM:PF04851,PFAM:PF07751,PFAM:PF12008,PIR:PIRSF016789,PIR:PIRSF034934,TIGRFAM:TIGR00214,TIGRFAM:TIGR00348,TIGRFAM:TIGR00945,NCBI_GP:EGT83241.1;Name=EGT83241.1;Ontology_term=GO:0006304,GO:0009307,GO:0009107,GO:0006464,GO:0005737,GO:0005524,GO:0003677,GO:0009035,GO:0003824,GO:0004519,GO:0016787,GO:0016415;gbkey=CDS;gene=lipB;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,DNA binding|0003677||,Type I site-specific deoxyribonuclease activity|0009035||,catalytic activity|0003824||,endonuclease activity|0004519||,hydrolase activity|0016787||,octanoyltransferase activity|0016415||;go_process=DNA modification|0006304||,DNA restriction-modification system|0009307||,lipoate biosynthetic process|0009107||,protein modification process|0006464||;locus_tag=GGE_0118;product=Octanoyltransferase;protein_id=EGT83241.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78750 79380 . + . ID=id-GGE_0118;Note=superfamily:SSF55681~class ii aars and biotin synthetases;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78750 79374 . + . ID=id-GGE_0118-2;Note=superfamily%3B label: BPL_LplA_LipB superfamily;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78762 79365 . + . ID=id-GGE_0118-3;Dbxref=InterPro:IPR000544;Note=HAMAP:MF_00013~lipb~octanoyltransferase;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78771 79353 . + . ID=id-GGE_0118-4;Note=HMMPanther:PTHR10993:SF0~octanoyltransferase~HMMPanther:PTHR10993~octanoyltransferase;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78825 79296 . + . ID=id-GGE_0118-5;Dbxref=InterPro:IPR000544,TIGRFAM:TIGR00214;Note=lipb: lipoyl(octanoyl) transferase~octanoyltransferase;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78852 79272 . + . ID=id-GGE_0118-6;Note=Gene3D:3.90.1550.10;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78915 79065 . + . ID=id-GGE_0118-7;Dbxref=InterPro:IPR004143,PFAM:PF03099;Note=bpl_lpla_lipb~biotin/lipoate a/b protein ligase;gbkey=misc_feature;gene=lipB;locus_tag=GGE_0118 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78798 78960 . - . ID=id-AFQR01000004.1:78798..78960;Dbxref=InterPro:IPR020605;Note=PatternScan:PS01313~lipb~octanoyltransferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 78915 78972 . - . ID=id-AFQR01000004.1:78915..78972;Note=BlastProDom:PD006086~lipb_haein_p44464;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 79440 80402 . + . ID=gene-GGE_0119;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank CDS 79440 80402 . + 0 ID=cds-EGT83242.1;Parent=gene-GGE_0119;Dbxref=GeneID:166230420,InterPro:IPR001509,InterPro:IPR003698,InterPro:IPR005130,InterPro:IPR005621,InterPro:IPR005888,InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR007197,InterPro:IPR010619,InterPro:IPR010920,InterPro:IPR010985,InterPro:IPR011014,InterPro:IPR011066,InterPro:IPR013785,InterPro:IPR016040,InterPro:IPR021144,PFAM:PF00924,PFAM:PF01370,PFAM:PF03313,PFAM:PF03925,PFAM:PF04055,PFAM:PF06738,PIR:PIRSF005963,PIR:PIRSF006054,TIGRFAM:TIGR00510,TIGRFAM:TIGR01181,NCBI_GP:EGT83242.1;Name=EGT83242.1;Ontology_term=GO:0044237,GO:0009107,GO:0008152,GO:0032297,GO:0009225,GO:0045449,GO:0055085,GO:0016020,GO:0051539,GO:0003677,GO:0005488,GO:0003824,GO:0050662,GO:0008460,GO:0051536,GO:0016992;gbkey=CDS;gene=lipA;go_component=membrane|0016020||;go_function=4 iron 4 sulfur cluster binding|0051539||,DNA binding|0003677||,binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,dTDP-glucose 4 6-dehydratase activity|0008460||,iron-sulfur cluster binding|0051536||,lipoate synthase activity|0016992||;go_process=cellular metabolic process|0044237||,lipoate biosynthetic process|0009107||,metabolic process|0008152||,negative regulation of DNA-dependent DNA replication initiation|0032297||,nucleotide-sugar metabolic process|0009225||,regulation of transcription|0045449||,transmembrane transport|0055085||;locus_tag=GGE_0119;product=Lipoyl synthase;protein_id=EGT83242.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79440 80400 . + . ID=id-GGE_0119;Dbxref=InterPro:IPR003698,PIR:PIRSF005963;Note=HAMAP:MF_00206~lipoyl_synth~lipoate synthase~lipoyl synthase~lipoate synthase;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79476 80367 . + . ID=id-GGE_0119-2;Note=HMMPanther:PTHR10949~lipoyl synthase;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79503 80340 . + . ID=id-GGE_0119-3;Dbxref=InterPro:IPR003698,TIGRFAM:TIGR00510;Note=lipa: lipoyl synthase~lipoate synthase;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79530 80313 . + . ID=id-GGE_0119-4;Note=multi-dom%3B label: PRK05481;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79578 80244 . + . ID=id-GGE_0119-5;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79584 80232 . + . ID=id-GGE_0119-6;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79701 80028 . + . ID=id-GGE_0119-7;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 79710 79923 . + . ID=id-GGE_0119-8;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=lipA;locus_tag=GGE_0119 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80423 80432 . - . ID=id-AFQR01000004.1:80423..80432;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80445 80454 . + . ID=id-AFQR01000004.1:80445..80454;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 80780 81787 . + . ID=gene-GGE_0120;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank CDS 80780 81787 . + 0 ID=cds-EGT83243.1;Parent=gene-GGE_0120;Dbxref=GeneID:1168960,InterPro:IPR000182,InterPro:IPR004821,InterPro:IPR005216,InterPro:IPR013166,InterPro:IPR014729,InterPro:IPR016181,PFAM:PF08218,PIR:PIRSF005751,TIGRFAM:TIGR00124,TIGRFAM:TIGR00125,NCBI_GP:EGT83243.1;Name=EGT83243.1;Ontology_term=GO:0009058,GO:0008152,GO:0008080,GO:0008771,GO:0003824;gbkey=CDS;gene=citC;go_function=N-acetyltransferase activity|0008080||,[citrate (pro-3S)-lyase] ligase activity|0008771||,catalytic activity|0003824||;go_process=biosynthetic process|0009058||,metabolic process|0008152||;locus_tag=GGE_0120;product=Citrate pro-3S-lyase ligase;protein_id=EGT83243.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80780 81785 . + . ID=id-GGE_0120;Dbxref=InterPro:IPR005216,PIR:PIRSF005751;Note=citrate lyase ligase~citrate lyase ligase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80780 81173 . + . ID=id-GGE_0120-2;Dbxref=InterPro:IPR000182;Note=ProfileScan:PS51186~gnat~gcn5-related n-acetyltransferase (gnat) domain;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80789 81779 . + . ID=id-GGE_0120-3;Dbxref=InterPro:IPR005216,TIGRFAM:TIGR00124;Note=multi-dom~cit_ly_ligase: [citrate (pro-3s)-lyase]~citrate lyase ligase%3B label: cit_ly_ligase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80855 81695 . + . ID=id-GGE_0120-4;Note=specific~superfamily%3B label: Citrate_lyase_ligase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80873 81101 . + . ID=id-GGE_0120-5;Dbxref=InterPro:IPR016181;Note=superfamily:SSF55729~acyl-coa n-acyltransferases (nat)~acyl-coa n-acyltransferase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80876 81026 . + . ID=id-GGE_0120-6;Dbxref=InterPro:IPR016181;Note=Gene3D:3.40.630.30~acyl-coa n-acyltransferase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81131 81425 . + . ID=id-GGE_0120-7;Note=BlastProDom:PD016147~citc_haein_p44462;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81203 81362 . + . ID=id-GGE_0120-8;Note=superfamily:SSF52374~nucleotidylyl transferase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81209 81341 . + . ID=id-GGE_0120-9;Dbxref=InterPro:IPR013166,PFAM:PF08218;Note=citrate_ly_lig~citrate lyase ligase;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81768 81777 . + . ID=id-GGE_0120-10;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=citC;locus_tag=GGE_0120 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 80957 81209 . - . ID=id-AFQR01000004.1:80957..81209;Dbxref=InterPro:IPR004821,TIGRFAM:TIGR00125;Note=cyt_tran_rel: cytidyltransferase-relate~cytidyltransferase-related;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81035 81521 . - . ID=id-AFQR01000004.1:81035..81521;Dbxref=InterPro:IPR014729;Note=Gene3D:3.40.50.620~rossmann-like alpha/beta/alpha sandwich fold;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 81825 82112 . + . ID=gene-GGE_0121;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank CDS 81825 82112 . + 0 ID=cds-EGT83244.1;Parent=gene-GGE_0121;Dbxref=GeneID:166201781,InterPro:IPR006495,InterPro:IPR023439,PFAM:PF06857,PIR:PIRSF002736,TIGRFAM:TIGR01608,NCBI_GP:EGT83244.1;Name=EGT83244.1;Ontology_term=GO:0005737;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||;locus_tag=GGE_0121;product=Citrate lyase acyl carrier protein;protein_id=EGT83244.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81825 82107 . + . ID=id-GGE_0121;Dbxref=InterPro:IPR006495,PIR:PIRSF002736;Note=HAMAP:MF_00805~citd~citrate lyase acyl carrier protein citd~citrate lyase%2C gamma subunit~citrate lyase acyl carrier protein citd;gbkey=misc_feature;gene=citD;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81825 82098 . + . ID=id-GGE_0121-2;Dbxref=InterPro:IPR006495,TIGRFAM:TIGR01608;Note=citd: citrate lyase acyl carrier protein~citrate lyase acyl carrier protein citd;gbkey=misc_feature;gene=citD;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81825 82086 . + . ID=id-GGE_0121-3;Note=superfamily%3B label: ACP superfamily;gbkey=misc_feature;gene=citD;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81825 82059 . + . ID=id-GGE_0121-4;Dbxref=InterPro:IPR006495;Note=BlastProDom:PD015389~citd_haein_p44461~citrate lyase acyl carrier protein citd;gbkey=misc_feature;gene=citD;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 81831 82077 . + . ID=id-GGE_0121-5;Dbxref=InterPro:IPR023439,PFAM:PF06857;Note=acp~malonate decarboxylase/citrate lyase acyl carrier protein;gbkey=misc_feature;gene=citD;locus_tag=GGE_0121 GCA_000222085.2|AFQR01000004.1 Genbank gene 82109 82984 . + . ID=gene-GGE_0122;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank CDS 82109 82984 . + 0 ID=cds-EGT83245.1;Parent=gene-GGE_0122;Dbxref=GeneID:1168952,InterPro:IPR005000,InterPro:IPR006475,InterPro:IPR011206,InterPro:IPR015813,PFAM:PF03328,PIR:PIRSF015582,TIGRFAM:TIGR01588,NCBI_GP:EGT83245.1;Name=EGT83245.1;Ontology_term=GO:0006084,GO:0006725,GO:0009346,GO:0005737,GO:0016830,GO:0003824,GO:0008815,GO:0008816;gbkey=CDS;gene=citE;go_component=citrate lyase complex|0009346||,cytoplasm|0005737||;go_function=carbon-carbon lyase activity|0016830||,catalytic activity|0003824||,citrate (pro-3S)-lyase activity|0008815||,citryl-CoA lyase activity|0008816||;go_process=acetyl-CoA metabolic process|0006084||,cellular aromatic compound metabolic process|0006725||;locus_tag=GGE_0122;product=Citrate lyase subunit beta;protein_id=EGT83245.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82109 82979 . + . ID=id-GGE_0122;Dbxref=InterPro:IPR011206,PIR:PIRSF015582;Note=citrate lyase%2C beta subunit~citrate lyase%2C beta subunit;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82109 82814 . + . ID=id-GGE_0122-2;Dbxref=InterPro:IPR015813;Note=superfamily:SSF51621~phosphoenolpyruvate/pyruvate domain~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82115 82970 . + . ID=id-GGE_0122-3;Dbxref=InterPro:IPR006475,TIGRFAM:TIGR01588;Note=cite: citrate (pro-3s)-lyase%2C beta subunit~citrate lyase%2C beta subunit%2C bacteria;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82115 82964 . + . ID=id-GGE_0122-4;Note=superfamily%3B label: malate_synt superfamily;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82115 82811 . + . ID=id-GGE_0122-5;Dbxref=InterPro:IPR015813;Note=Gene3D:3.20.20.60~pyruvate/phosphoenolpyruvate kinase;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82118 82961 . + . ID=id-GGE_0122-6;Note=HMMPanther:PTHR11105~family not named;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82124 82769 . + . ID=id-GGE_0122-7;Dbxref=InterPro:IPR005000,PFAM:PF03328;Note=hpch_hpai~aldehyde-lyase domain;gbkey=misc_feature;gene=citE;locus_tag=GGE_0122 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82166 82835 . - . ID=id-AFQR01000004.1:82166..82835;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 82998 84500 . + . ID=gene-GGE_0123;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank CDS 82998 84500 . + 0 ID=cds-EGT83246.1;Parent=gene-GGE_0123;Dbxref=GeneID:1168950,InterPro:IPR006472,PFAM:PF04223,PIR:PIRSF009451,TIGRFAM:TIGR01584,NCBI_GP:EGT83246.1;Name=EGT83246.1;Ontology_term=GO:0006084,GO:0009346,GO:0005737,GO:0008814;gbkey=CDS;gene=citF;go_component=citrate lyase complex|0009346||,cytoplasm|0005737||;go_function=citrate CoA-transferase activity|0008814||;go_process=acetyl-CoA metabolic process|0006084||;locus_tag=GGE_0123;product=Citrate lyase alpha chain;protein_id=EGT83246.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 82998 84498 . + . ID=id-GGE_0123;Dbxref=InterPro:IPR006472,PIR:PIRSF009451;Note=citrate lyase%2C alpha subunit~citrate lyase%2C alpha subunit;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83019 83667 . + . ID=id-GGE_0123-2;Note=Gene3D:3.40.1080.10;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83043 84456 . + . ID=id-GGE_0123-3;Dbxref=InterPro:IPR006472,TIGRFAM:TIGR01584;Note=citf: citrate lyase%2C alpha subunit~citrate lyase%2C alpha subunit;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83097 84396 . + . ID=id-GGE_0123-4;Dbxref=InterPro:IPR006472,PFAM:PF04223;Note=multi-dom~citf~citrate lyase%2C alpha subunit%3B label: CitF;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83097 83592 . + . ID=id-GGE_0123-5;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83691 83805 . + . ID=id-GGE_0123-6;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 83694 83724 . + . ID=id-GGE_0123-7;Note=Gene3D:3.40.810.20;gbkey=misc_feature;gene=citF;locus_tag=GGE_0123 GCA_000222085.2|AFQR01000004.1 Genbank gene 84681 86078 . + . ID=gene-GGE_0124;Name=GGE_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank CDS 84681 86078 . + 0 ID=cds-EGT83247.1;Parent=gene-GGE_0124;Dbxref=GeneID:14286109,InterPro:IPR002736,InterPro:IPR005551,InterPro:IPR017551,PFAM:PF01874,PFAM:PF03802,TIGRFAM:TIGR03124,TIGRFAM:TIGR03125,NCBI_GP:EGT83247.1;Name=EGT83247.1;Note=citXG;Ontology_term=GO:0016310,GO:0051191,GO:0005524,GO:0016772,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||,transferase activity transferring phosphorus-containing groups|0016772||,triphosphoribosyl-dephospho-CoA synthase activity|0046917||;go_process=phosphorylation|0016310||,prosthetic group biosynthetic process|0051191||;locus_tag=GGE_0124;product=Protein CitXG;protein_id=EGT83247.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84699 85215 . + . ID=id-GGE_0124;Dbxref=InterPro:IPR005551;Note=HAMAP:MF_00398~citx~apo-citrate lyase phosphoribosyl-dephospho-coa transferase;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84723 85182 . + . ID=id-GGE_0124-2;Dbxref=InterPro:IPR005551,PFAM:PF03802;Note=citx~apo-citrate lyase phosphoribosyl-dephospho-coa transferase;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84726 85176 . + . ID=id-GGE_0124-3;Dbxref=InterPro:IPR005551,TIGRFAM:TIGR03124;Note=superfamily~ctirate_citx: holo-acp synthase citx~apo-citrate lyase phosphoribosyl-dephospho-coa transferase%3B label: CitX superfamily;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 85173 85578 . + . ID=id-GGE_0124-4;Dbxref=InterPro:IPR002736;Note=HAMAP:MF_00397~citg~triphosphoribosyl-dephospho-coa protein;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 85230 85521 . + . ID=id-GGE_0124-5;Dbxref=InterPro:IPR017551,TIGRFAM:TIGR03125;Note=superfamily~citrate_citg: triphosphoribosyl-dephosph~triphosphoribosyl-dephospho-coa synthase%2C citg%3B label: CitG superfamily;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 85236 85506 . + . ID=id-GGE_0124-6;Dbxref=InterPro:IPR002736,PFAM:PF01874;Note=citg~triphosphoribosyl-dephospho-coa protein;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 85581 85590 . + . ID=id-GGE_0124-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0124 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84705 85821 . - . ID=id-AFQR01000004.1:84705..85821;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84717 86013 . - . ID=id-AFQR01000004.1:84717..86013;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 84890 84899 . - . ID=id-AFQR01000004.1:84890..84899;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 86080 87519 . + . ID=gene-GGE_0125;Name=GGE_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank CDS 86080 87519 . + 0 ID=cds-EGT83248.1;Parent=gene-GGE_0125;Dbxref=GeneID:2499538,InterPro:IPR001898,PFAM:PF00939,TIGRFAM:TIGR00785,NCBI_GP:EGT83248.1;Name=EGT83248.1;Note=HI_0020;Ontology_term=GO:0006814,GO:0055085,GO:0016020,GO:0005215;gbkey=CDS;go_component=membrane|0016020||;go_function=transporter activity|0005215||;go_process=sodium ion transport|0006814||,transmembrane transport|0055085||;locus_tag=GGE_0125;product=putative sodium/sulphate symporter;protein_id=EGT83248.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86086 87499 . + . ID=id-GGE_0125;Note=multi-dom%3B label: CitT;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86095 87496 . + . ID=id-GGE_0125-2;Dbxref=InterPro:IPR001898,PFAM:PF00939;Note=na_sulph_symp~sodium/sulphate symporter;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86101 86137 . + . ID=id-GGE_0125-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86104 87493 . + . ID=id-GGE_0125-4;Note=HMMPanther:PTHR10283:SF13~2-oxoglutarate/malate translocator~HMMPanther:PTHR10283~solute carrier family 13 member;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 87424 . + . ID=id-GGE_0125-5;Dbxref=InterPro:IPR001898,TIGRFAM:TIGR00785;Note=dass: transporter%2C divalent anion:na+ sympor~sodium/sulphate symporter;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86311 87136 . + . ID=id-GGE_0125-6;Note=specific~superfamily%3B label: ArsB_NhaD_permease;gbkey=misc_feature;locus_tag=GGE_0125 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86116 87367 . - . ID=id-AFQR01000004.1:86116..87367;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86125 86905 . - . ID=id-AFQR01000004.1:86125..86905;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86134 87178 . - . ID=id-AFQR01000004.1:86134..87178;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86137 86170 . - . ID=id-AFQR01000004.1:86137..86170;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86140 86245 . - . ID=id-AFQR01000004.1:86140..86245;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 87421 . - . ID=id-AFQR01000004.1:86149..87421;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 87268 . - . ID=id-AFQR01000004.1:86149..87268;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 87067 . - . ID=id-AFQR01000004.1:86149..87067;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 86962 . - . ID=id-AFQR01000004.1:86149..86962;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 86752 . - . ID=id-AFQR01000004.1:86149..86752;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 86656 . - . ID=id-AFQR01000004.1:86149..86656;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 86149 86347 . - . ID=id-AFQR01000004.1:86149..86347;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 87902 89326 . + . ID=gene-GGE_0126;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank CDS 87902 89326 . + 0 ID=cds-EGT83249.1;Parent=gene-GGE_0126;Dbxref=GeneID:2501533,InterPro:IPR002792,InterPro:IPR005839,InterPro:IPR006463,InterPro:IPR007197,InterPro:IPR013848,InterPro:IPR020612,InterPro:IPR023404,PFAM:PF00919,PFAM:PF01938,PFAM:PF04055,TIGRFAM:TIGR00089,TIGRFAM:TIGR01574,NCBI_GP:EGT83249.1;Name=EGT83249.1;Ontology_term=GO:0009451,GO:0006400,GO:0005575,GO:0005737,GO:0051539,GO:0003824,GO:0051536,GO:0016740;gbkey=CDS;gene=miaB;go_component=cellular_component|0005575||,cytoplasm|0005737||;go_function=4 iron 4 sulfur cluster binding|0051539||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,transferase activity|0016740||;go_process=RNA modification|0009451||,tRNA modification|0006400||;locus_tag=GGE_0126;product=Dimethylallyladenosine tRNA methylthiotransferase miaB;protein_id=EGT83249.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87902 89237 . + . ID=id-GGE_0126;Note=multi-dom%3B label: PRK14325;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87908 89219 . + . ID=id-GGE_0126-2;Dbxref=InterPro:IPR005839;Note=HMMPanther:PTHR11918~family not named~methylthiotransferase;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87911 89216 . + . ID=id-GGE_0126-3;Dbxref=InterPro:IPR006463;Note=HAMAP:MF_01864~trna_metthiotr_miab~trna-i(6)a37 modification enzyme miab;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87911 88256 . + . ID=id-GGE_0126-4;Dbxref=InterPro:IPR013848;Note=ProfileScan:PS51449~mttase_n~methylthiotransferase;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87914 89213 . + . ID=id-GGE_0126-5;Dbxref=InterPro:IPR006463,TIGRFAM:TIGR01574;Note=miab-methiolase: trna-i(6)a37 thiotra~trna-i(6)a37 modification enzyme miab;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87914 89204 . + . ID=id-GGE_0126-6;Dbxref=InterPro:IPR005839,TIGRFAM:TIGR00089;Note=tigr00089: rna modification enzyme%2C m~methylthiotransferase;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87914 88205 . + . ID=id-GGE_0126-7;Dbxref=InterPro:IPR013848,PFAM:PF00919;Note=superfamily~upf0004~methylthiotransferase%3B label: UPF0004 superfamily;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88244 88793 . + . ID=id-GGE_0126-8;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88340 88607 . + . ID=id-GGE_0126-9;Dbxref=InterPro:IPR023404;Note=Gene3D:3.80.30.20~radical sam%2C alpha/beta horseshoe;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88355 88427 . + . ID=id-GGE_0126-10;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88370 88508 . + . ID=id-GGE_0126-11;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;gene=miaB;locus_tag=GGE_0126 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 87965 88355 . - . ID=id-AFQR01000004.1:87965..88355;Dbxref=InterPro:IPR020612;Note=PatternScan:PS01278~mttase_radical~methylthiotransferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88091 89036 . - . ID=id-AFQR01000004.1:88091..89036;Dbxref=InterPro:IPR002792,PFAM:PF01938;Note=superfamily~tram~deoxyribonuclease/rho motif-related tram%3B label: TRAM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 88094 89036 . - . ID=id-AFQR01000004.1:88094..89036;Dbxref=InterPro:IPR002792;Note=ProfileScan:PS50926~tram~deoxyribonuclease/rho motif-related tram;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89346 89355 . - . ID=id-AFQR01000004.1:89346..89355;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89364 89373 . + . ID=id-AFQR01000004.1:89364..89373;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 89395 90054 . - . ID=gene-GGE_0127;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank CDS 89395 90054 . - 0 ID=cds-EGT83250.1;Parent=gene-GGE_0127;Dbxref=GeneID:81337004,InterPro:IPR002043,InterPro:IPR005122,InterPro:IPR018085,PFAM:PF03167,TIGRFAM:TIGR00628,NCBI_GP:EGT83250.1;Name=EGT83250.1;Ontology_term=GO:0006281,GO:0006284,GO:0016799,GO:0004844;gbkey=CDS;gene=ung;go_function=hydrolase activity hydrolyzing N-glycosyl compounds|0016799||,uracil DNA N-glycosylase activity|0004844||;go_process=DNA repair|0006281||,base-excision repair|0006284||;locus_tag=GGE_0127;product=Uracil-DNA glycosylase;protein_id=EGT83250.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89395 90052 . - . ID=id-GGE_0127;Dbxref=InterPro:IPR002043;Note=superfamily~HAMAP:MF_00148~udg~uracil-dna glycosylase%3B label: UDG superfamily;gbkey=misc_feature;gene=ung;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89395 90031 . - . ID=id-GGE_0127-2;Dbxref=InterPro:IPR002043,TIGRFAM:TIGR00628;Note=ung: uracil-dna glycosylase~uracil-dna glycosylase;gbkey=misc_feature;gene=ung;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89401 90049 . - . ID=id-GGE_0127-3;Dbxref=InterPro:IPR005122;Note=Gene3D:3.40.470.10~uracil-dna glycosylase-like~superfamily:SSF52141~uracil-dna glycosylase-like~uracil-dna glycosylase-like;gbkey=misc_feature;gene=ung;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89428 90022 . - . ID=id-GGE_0127-4;Dbxref=InterPro:IPR002043;Note=HMMPanther:PTHR11264~family not named~uracil-dna glycosylase;gbkey=misc_feature;gene=ung;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89542 89872 . - . ID=id-GGE_0127-5;Dbxref=InterPro:IPR005122,PFAM:PF03167;Note=udg~uracil-dna glycosylase-like;gbkey=misc_feature;gene=ung;locus_tag=GGE_0127 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 89425 89557 . + . ID=id-AFQR01000004.1:89425..89557;Dbxref=InterPro:IPR018085;Note=PatternScan:PS00130~u_dna_glycosylase~uracil-dna glycosylase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90070 90070 . + . ID=id-AFQR01000004.1:90070..90070;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 90322 90705 . + . ID=gene-GGE_0128;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=GGE_0128 GCA_000222085.2|AFQR01000004.1 Genbank CDS 90322 90705 . + 0 ID=cds-EGT83251.1;Parent=gene-GGE_0128;Dbxref=GeneID:1175993,InterPro:IPR001150,InterPro:IPR011140,InterPro:IPR019777,PFAM:PF01228,PIR:PIRSF000378,NCBI_GP:EGT83251.1;Name=EGT83251.1;Ontology_term=GO:0008152,GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||;go_process=metabolic process|0008152||;locus_tag=GGE_0128;product=Autonomous glycyl radical cofactor;protein_id=EGT83251.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90322 90703 . + . ID=id-GGE_0128;Dbxref=InterPro:IPR011140,PIR:PIRSF000378;Note=HAMAP:MF_00806~grca~glycyl radical cofactor protein yfid~glycyl radical cofactor protein yfid~glycyl radical cofactor protein yfid;gbkey=misc_feature;gene=grcA;locus_tag=GGE_0128 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90337 90691 . + . ID=id-GGE_0128-2;Dbxref=InterPro:IPR001150;Note=ProfileScan:PS51149~gly_radical_2~formate c-acetyltransferase glycine radical;gbkey=misc_feature;gene=grcA;locus_tag=GGE_0128 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90367 90604 . + . ID=id-GGE_0128-3;Dbxref=InterPro:IPR001150,PFAM:PF01228;Note=gly_radical~formate c-acetyltransferase glycine radical;gbkey=misc_feature;gene=grcA;locus_tag=GGE_0128 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90469 90556 . + . ID=id-GGE_0128-4;Note=superfamily:SSF51998~pfl-like glycyl radical enzyme;gbkey=misc_feature;gene=grcA;locus_tag=GGE_0128 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90349 90613 . - . ID=id-AFQR01000004.1:90349..90613;Dbxref=InterPro:IPR019777;Note=PatternScan:PS00850~gly_radical_1~formate c-acetyltransferase glycine radical%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90487 90529 . - . ID=id-AFQR01000004.1:90487..90529;Note=superfamily%3B label: RNR_PFL superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90511 90514 . - . ID=id-AFQR01000004.1:90511..90514;Note=Gene3D:3.20.70.20;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90768 90777 . - . ID=id-AFQR01000004.1:90768..90777;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 90865 92661 . + . ID=gene-GGE_0129;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank CDS 90865 92661 . + 0 ID=cds-EGT83252.1;Parent=gene-GGE_0129;Dbxref=GeneID:166223201,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006297,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR013842,PFAM:PF00009,PFAM:PF00679,PFAM:PF03144,PFAM:PF06421,TIGRFAM:TIGR00231,TIGRFAM:TIGR01393,NCBI_GP:EGT83252.1;Name=EGT83252.1;Ontology_term=GO:0005525,GO:0003924;gbkey=CDS;gene=lepA;go_function=GTP binding|0005525||,GTPase activity|0003924||;locus_tag=GGE_0129;product=Elongation factor 4;protein_id=EGT83252.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90865 92656 . + . ID=id-GGE_0129;Note=multi-dom%3B label: PRK05433;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90865 92650 . + . ID=id-GGE_0129-2;Dbxref=InterPro:IPR006297;Note=HAMAP:MF_00071~lepa~gtp-binding protein lepa;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90865 92344 . + . ID=id-GGE_0129-3;Note=HMMPanther:PTHR23115:SF40~gtp-binding protein lepa~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90865 91483 . + . ID=id-GGE_0129-4;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90871 92647 . + . ID=id-GGE_0129-5;Dbxref=InterPro:IPR006297,TIGRFAM:TIGR01393;Note=lepa: gtp-binding protein lepa~gtp-binding protein lepa;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90871 91438 . + . ID=id-GGE_0129-6;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90871 91405 . + . ID=id-GGE_0129-7;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90871 91396 . + . ID=id-GGE_0129-8;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90880 91402 . + . ID=id-GGE_0129-9;Note=specific~superfamily%3B label: LepA;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90883 90907 . + . ID=id-GGE_0129-10;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=lepA;locus_tag=GGE_0129 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90892 91012 . - . ID=id-AFQR01000004.1:90892..91012;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90895 91243 . - . ID=id-AFQR01000004.1:90895..91243;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90898 91087 . - . ID=id-AFQR01000004.1:90898..91087;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90901 91135 . - . ID=id-AFQR01000004.1:90901..91135;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90904 92548 . - . ID=id-AFQR01000004.1:90904..92548;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90904 91867 . - . ID=id-AFQR01000004.1:90904..91867;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 90913 90991 . - . ID=id-AFQR01000004.1:90913..90991;Dbxref=InterPro:IPR000795;Note=PatternScan:PS00301~efactor_gtp~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91078 91480 . - . ID=id-AFQR01000004.1:91078..91480;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91099 91744 . - . ID=id-AFQR01000004.1:91099..91744;Note=Gene3D:3.30.70.870;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91102 92068 . - . ID=id-AFQR01000004.1:91102..92068;Note=specific~superfamily%3B label: Elongation_Factor_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91108 91735 . - . ID=id-AFQR01000004.1:91108..91735;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91123 92062 . - . ID=id-AFQR01000004.1:91123..92062;Dbxref=InterPro:IPR000640,PFAM:PF00679;Note=efg_c~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91123 91438 . - . ID=id-AFQR01000004.1:91123..91438;Note=specific~superfamily%3B label: lepA_II;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91132 92068 . - . ID=id-AFQR01000004.1:91132..92068;Dbxref=InterPro:IPR000640;Note=Gene3D:3.30.70.240~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91156 92059 . - . ID=id-AFQR01000004.1:91156..92059;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91156 91444 . - . ID=id-AFQR01000004.1:91156..91444;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91186 92326 . - . ID=id-AFQR01000004.1:91186..92326;Dbxref=InterPro:IPR013842,PFAM:PF06421;Note=lepa_c~gtp-binding protein lepa;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91189 92326 . - . ID=id-AFQR01000004.1:91189..92326;Note=superfamily%3B label: LepA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 91237 91360 . - . ID=id-AFQR01000004.1:91237..91360;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 92670 93719 . + . ID=gene-GGE_0130;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank CDS 92670 93719 . + 0 ID=cds-EGT83253.1;Parent=gene-GGE_0130;Dbxref=GeneID:1170766,InterPro:IPR000223,InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019533,InterPro:IPR019756,InterPro:IPR019757,InterPro:IPR019758,InterPro:IPR019759,InterPro:IPR019766,PFAM:PF00717,PFAM:PF10502,TIGRFAM:TIGR02227,NCBI_GP:EGT83253.1;Name=EGT83253.1;Ontology_term=GO:0006508,GO:0016021,GO:0016020,GO:0008236;gbkey=CDS;gene=lepB;go_component=integral to membrane|0016021||,membrane|0016020||;go_function=serine-type peptidase activity|0008236||;go_process=proteolysis|0006508||;locus_tag=GGE_0130;product=Signal peptidase I;protein_id=EGT83253.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92676 92724 . + . ID=id-GGE_0130;Note=transmembrane_regions;gbkey=misc_feature;gene=lepB;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92751 93621 . + . ID=id-GGE_0130-2;Note=multi-dom%3B label: PRK10861;gbkey=misc_feature;gene=lepB;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92751 93618 . + . ID=id-GGE_0130-3;Note=HMMPanther:PTHR12383:SF1~signal peptidase i~HMMPanther:PTHR12383~family not named;gbkey=misc_feature;gene=lepB;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92931 93399 . + . ID=id-GGE_0130-4;Dbxref=InterPro:IPR000223,TIGRFAM:TIGR02227;Note=sigpep_i_bact: signal peptidase i~peptidase s26a%2C signal peptidase i;gbkey=misc_feature;gene=lepB;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92976 93411 . + . ID=id-GGE_0130-5;Dbxref=InterPro:IPR015927;Note=superfamily:SSF51306~lexa/signal peptidase~peptidase s24/s26a/s26b/s26c;gbkey=misc_feature;gene=lepB;locus_tag=GGE_0130 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92694 93009 . - . ID=id-AFQR01000004.1:92694..93009;Dbxref=InterPro:IPR019756;Note=PatternScan:PS00501~spase_i_1~peptidase s26a%2C signal peptidase i%2C serine active site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92709 93258 . - . ID=id-AFQR01000004.1:92709..93258;Dbxref=InterPro:IPR019757;Note=PatternScan:PS00760~spase_i_2~peptidase s26a%2C signal peptidase i%2C lysine active site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92709 93252 . - . ID=id-AFQR01000004.1:92709..93252;Dbxref=InterPro:IPR000223;Note=FPrintScan:PR00727~leaderptase~peptidase s26a%2C signal peptidase i;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92712 93549 . - . ID=id-AFQR01000004.1:92712..93549;Dbxref=InterPro:IPR019758;Note=PatternScan:PS00761~spase_i_3~peptidase s26a%2C signal peptidase i%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92721 92982 . - . ID=id-AFQR01000004.1:92721..92982;Dbxref=InterPro:IPR000223;Note=FPrintScan:PR00727~leaderptase~peptidase s26a%2C signal peptidase i;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92730 93534 . - . ID=id-AFQR01000004.1:92730..93534;Dbxref=InterPro:IPR000223;Note=FPrintScan:PR00727~leaderptase~peptidase s26a%2C signal peptidase i;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92730 92931 . - . ID=id-AFQR01000004.1:92730..92931;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92736 92925 . - . ID=id-AFQR01000004.1:92736..92925;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92739 92757 . - . ID=id-AFQR01000004.1:92739..92757;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92757 93549 . - . ID=id-AFQR01000004.1:92757..93549;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92777 92786 . - . ID=id-AFQR01000004.1:92777..92786;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92793 93525 . - . ID=id-AFQR01000004.1:92793..93525;Dbxref=InterPro:IPR019533,PFAM:PF10502;Note=peptidase_s26~peptidase s26;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92811 93534 . - . ID=id-AFQR01000004.1:92811..93534;Dbxref=InterPro:IPR011056;Note=Gene3D:2.10.109.10~peptidase s24/s26a/s26b/s26c%2C beta-ribbon domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92841 93000 . - . ID=id-AFQR01000004.1:92841..93000;Dbxref=InterPro:IPR019759,PFAM:PF00717;Note=peptidase_s24~peptidase s24/s26a/s26b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92922 93282 . - . ID=id-AFQR01000004.1:92922..93282;Dbxref=InterPro:IPR019766;Note=Gene3D:2.170.230.10~peptidase s26a%2C all-beta subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 92952 92991 . - . ID=id-AFQR01000004.1:92952..92991;Note=specific~superfamily%3B label: Peptidase_S24_S26 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 93721 94404 . + . ID=gene-GGE_0131;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank CDS 93721 94404 . + 0 ID=cds-EGT83254.1;Parent=gene-GGE_0131;Dbxref=GeneID:189043320,InterPro:IPR000999,InterPro:IPR001159,InterPro:IPR011907,InterPro:IPR014720,PFAM:PF00035,PFAM:PF00636,TIGRFAM:TIGR02191,NCBI_GP:EGT83254.1;Name=EGT83254.1;Ontology_term=GO:0006396,GO:0016075,GO:0005622,GO:0003723,GO:0003725,GO:0004525;gbkey=CDS;gene=rnc;go_component=intracellular|0005622||;go_function=RNA binding|0003723||,double-stranded RNA binding|0003725||,ribonuclease III activity|0004525||;go_process=RNA processing|0006396||,rRNA catabolic process|0016075||;locus_tag=GGE_0131;product=Ribonuclease 3;protein_id=EGT83254.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93721 94402 . + . ID=id-GGE_0131;Note=multi-dom%3B label: rnc;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93721 94192 . + . ID=id-GGE_0131-2;Dbxref=InterPro:IPR000999;Note=superfamily:SSF69065~rnase iii domain-like~ribonuclease iii;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93733 94366 . + . ID=id-GGE_0131-3;Note=HMMPanther:PTHR11207~family not named;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93733 94138 . + . ID=id-GGE_0131-4;Dbxref=InterPro:IPR000999;Note=Gene3D:1.10.1520.10~ribonuclease iii;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93733 94090 . + . ID=id-GGE_0131-5;Dbxref=InterPro:IPR000999;Note=ProfileScan:PS50142~rnase_3_2~ribonuclease iii;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93742 94375 . + . ID=id-GGE_0131-6;Dbxref=InterPro:IPR011907,TIGRFAM:TIGR02191;Note=rnaseiii: ribonuclease iii~ribonuclease iii%2C bacterial;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93745 94378 . + . ID=id-GGE_0131-7;Dbxref=InterPro:IPR011907;Note=HAMAP:MF_00104~rnase_iii~ribonuclease iii%2C bacterial;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93778 94102 . + . ID=id-GGE_0131-8;Note=specific~superfamily%3B label: RIBOc;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93829 93994 . + . ID=id-GGE_0131-9;Dbxref=InterPro:IPR000999,PFAM:PF00636;Note=ribonuclease_3~ribonuclease iii;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94042 94075 . + . ID=id-GGE_0131-10;Note=superfamily:SSF54768~dsrna-binding domain-like;gbkey=misc_feature;gene=rnc;locus_tag=GGE_0131 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93748 93829 . - . ID=id-AFQR01000004.1:93748..93829;Dbxref=InterPro:IPR000999;Note=PatternScan:PS00517~rnase_3_1~ribonuclease iii;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93934 94183 . - . ID=id-AFQR01000004.1:93934..94183;Dbxref=InterPro:IPR001159,PFAM:PF00035;Note=dsrm~double-stranded rna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93937 94180 . - . ID=id-AFQR01000004.1:93937..94180;Dbxref=InterPro:IPR014720;Note=specific~superfamily~Gene3D:3.30.160.20~double-stranded rna-binding-like%3B label: DSRM;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 93943 94180 . - . ID=id-AFQR01000004.1:93943..94180;Dbxref=InterPro:IPR001159;Note=ProfileScan:PS50137~ds_rbd~double-stranded rna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94315 94324 . - . ID=id-AFQR01000004.1:94315..94324;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 94401 95309 . + . ID=gene-GGE_0132;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank CDS 94401 95309 . + 0 ID=cds-EGT83255.1;Parent=gene-GGE_0132;Dbxref=GeneID:1169543,InterPro:IPR002917,InterPro:IPR004044,InterPro:IPR005225,InterPro:IPR005662,InterPro:IPR006073,InterPro:IPR009019,InterPro:IPR015946,PFAM:PF01926,PFAM:PF07650,TIGRFAM:TIGR00231,TIGRFAM:TIGR00436,NCBI_GP:EGT83255.1;Name=EGT83255.1;Ontology_term=GO:0005622,GO:0005525,GO:0003723;gbkey=CDS;gene=era;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,RNA binding|0003723||;locus_tag=GGE_0132;product=GTPase Era;protein_id=EGT83255.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94407 95295 . + . ID=id-GGE_0132;Note=HMMPanther:PTHR11649~family not named;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94419 95283 . + . ID=id-GGE_0132-2;Note=multi-dom%3B label: era;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94425 95271 . + . ID=id-GGE_0132-3;Dbxref=InterPro:IPR005662;Note=HAMAP:MF_00367~gtpase_era~gtp-binding protein era;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94425 94905 . + . ID=id-GGE_0132-4;Note=specific~superfamily%3B label: Era;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94425 94899 . + . ID=id-GGE_0132-5;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94434 95217 . + . ID=id-GGE_0132-6;Dbxref=InterPro:IPR005662,TIGRFAM:TIGR00436;Note=era: gtp-binding protein era~gtp-binding protein era;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94437 94956 . + . ID=id-GGE_0132-7;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94440 94992 . + . ID=id-GGE_0132-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94440 94464 . + . ID=id-GGE_0132-9;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94467 94719 . + . ID=id-GGE_0132-10;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature;gene=era;locus_tag=GGE_0132 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94458 94644 . - . ID=id-AFQR01000004.1:94458..94644;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94593 95109 . - . ID=id-AFQR01000004.1:94593..95109;Dbxref=InterPro:IPR004044,PFAM:PF07650;Note=kh_2~k homology%2C type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94596 95106 . - . ID=id-AFQR01000004.1:94596..95106;Note=superfamily%3B label: KH-I superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94635 95025 . - . ID=id-AFQR01000004.1:94635..95025;Dbxref=InterPro:IPR004044;Note=ProfileScan:PS50823~kh_type_2~k homology%2C type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94698 94992 . - . ID=id-AFQR01000004.1:94698..94992;Dbxref=InterPro:IPR015946;Note=Gene3D:3.30.300.20~ky domain-like%2C alpha/beta;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 94749 94953 . - . ID=id-AFQR01000004.1:94749..94953;Dbxref=InterPro:IPR009019;Note=superfamily:SSF54814~prokaryotic type kh domain (kh-domain type ii)~k homology%2C prokaryotic type;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 95307 95316 . + . ID=id-AFQR01000004.1:95307..95316;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 95513 95974 . + . ID=gene-GGE_0133;Name=GGE_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0133 GCA_000222085.2|AFQR01000004.1 Genbank CDS 95513 95974 . + 0 ID=cds-EGT83256.1;Parent=gene-GGE_0133;Dbxref=GeneID:283769315,InterPro:IPR002686,PFAM:PF01797,NCBI_GP:EGT83256.1;Name=EGT83256.1;Note=ZP_06342215;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||,transposase activity|0004803||;go_process=transposition DNA-mediated|0006313||;locus_tag=GGE_0133;product=transposase like protein;protein_id=EGT83256.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 95528 95903 . + . ID=id-GGE_0133;Dbxref=InterPro:IPR002686;Note=superfamily:SSF143422~transposase is200-like~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0133 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 95531 95903 . + . ID=id-GGE_0133-2;Dbxref=InterPro:IPR002686;Note=Gene3D:3.30.70.1290~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0133 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 95558 95867 . + . ID=id-GGE_0133-3;Note=superfamily%3B label: Transposase_17 superfamily;gbkey=misc_feature;locus_tag=GGE_0133 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 95561 95864 . + . ID=id-GGE_0133-4;Dbxref=InterPro:IPR002686,PFAM:PF01797;Note=transposase_17~transposase is200-like;gbkey=misc_feature;locus_tag=GGE_0133 GCA_000222085.2|AFQR01000004.1 Genbank gene 96153 97055 . - . ID=gene-GGE_0134;Name=GGE_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank CDS 96153 97055 . - 0 ID=cds-EGT83257.1;Parent=gene-GGE_0134;Dbxref=GeneID:3915923,InterPro:IPR000620,InterPro:IPR004626,PFAM:PF00892,TIGRFAM:TIGR00688,NCBI_GP:EGT83257.1;Name=EGT83257.1;Note=HI_0223;Ontology_term=GO:0006810,GO:0005887,GO:0016020,GO:0005215;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0134;product=putative rarD protein;protein_id=EGT83257.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96171 97035 . - . ID=id-GGE_0134;Note=multi-dom%3B label: RarD;gbkey=misc_feature;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96180 96927 . - . ID=id-GGE_0134-2;Dbxref=InterPro:IPR004626,TIGRFAM:TIGR00688;Note=rard: protein rard~rard protein;gbkey=misc_feature;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96192 96222 . - . ID=id-GGE_0134-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96219 96534 . - . ID=id-GGE_0134-4;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96291 96483 . - . ID=id-GGE_0134-5;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_0134 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96213 96978 . + . ID=id-AFQR01000004.1:96213..96978;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96213 96804 . + . ID=id-AFQR01000004.1:96213..96804;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96222 96882 . + . ID=id-AFQR01000004.1:96222..96882;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96222 96693 . + . ID=id-AFQR01000004.1:96222..96693;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96222 96471 . + . ID=id-AFQR01000004.1:96222..96471;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96222 96393 . + . ID=id-AFQR01000004.1:96222..96393;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96222 96288 . + . ID=id-AFQR01000004.1:96222..96288;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 96480 96720 . + . ID=id-AFQR01000004.1:96480..96720;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 97162 97623 . + . ID=gene-GGE_0135;Name=GGE_0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank CDS 97162 97623 . + 0 ID=cds-EGT83258.1;Parent=gene-GGE_0135;Dbxref=GeneID:1175192,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR013196,InterPro:IPR019885,InterPro:IPR019887,PFAM:PF01037,PFAM:PF08279,NCBI_GP:EGT83258.1;Name=EGT83258.1;Note=HI_0224;Ontology_term=GO:0006355,GO:0005622,GO:0043565,GO:0003700;gbkey=CDS;go_component=intracellular|0005622||;go_function=sequence-specific DNA binding|0043565||,sequence-specific DNA binding transcription factor activity|0003700||;go_process=regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0135;product=putative transcription regulator HTH%2C AsnC-type;protein_id=EGT83258.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97162 97615 . + . ID=id-GGE_0135;Note=multi-dom%3B label: Lrp;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97168 97351 . + . ID=id-GGE_0135-2;Note=superfamily:SSF46785~'winged helix' dna-binding domain;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97174 97492 . + . ID=id-GGE_0135-3;Note=superfamily%3B label: WHTH_GntR superfamily;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97174 97348 . + . ID=id-GGE_0135-4;Dbxref=InterPro:IPR000485;Note=ProfileScan:PS50956~hth_asnc_2~transcription regulator hth%2C asnc-type;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97174 97213 . + . ID=id-GGE_0135-5;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97177 97315 . + . ID=id-GGE_0135-6;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97189 97285 . + . ID=id-GGE_0135-7;Dbxref=InterPro:IPR013196,PFAM:PF08279;Note=hth_11~helix-turn-helix%2C type 11;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97228 97243 . + . ID=id-GGE_0135-8;Dbxref=InterPro:IPR019885;Note=PatternScan:PS00519~hth_asnc_1~transcription regulator hth%2C asnc-type%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97333 97447 . + . ID=id-GGE_0135-9;Dbxref=InterPro:IPR019887;Note=Gene3D:3.30.70.920~transcription regulator asnc-type;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97357 97414 . + . ID=id-GGE_0135-10;Dbxref=InterPro:IPR011008;Note=superfamily:SSF54909~dimeric alpha+beta barrel~dimeric alpha-beta barrel;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97372 97384 . + . ID=id-GGE_0135-11;Dbxref=InterPro:IPR019887,PFAM:PF01037;Note=asnc_trans_reg~transcription regulator asnc-type;gbkey=misc_feature;locus_tag=GGE_0135 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97198 97222 . - . ID=id-AFQR01000004.1:97198..97222;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97222 97255 . - . ID=id-AFQR01000004.1:97222..97255;Dbxref=InterPro:IPR000485;Note=FPrintScan:PR00033~hthasnc~transcription regulator hth%2C asnc-type;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97771 97780 . - . ID=id-AFQR01000004.1:97771..97780;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 97784 98524 . - . ID=gene-GGE_0136;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank CDS 97784 98524 . - 0 ID=cds-EGT83259.1;Parent=gene-GGE_0136;Dbxref=GeneID:1176354,InterPro:IPR001537,InterPro:IPR004441,InterPro:IPR013123,PFAM:PF00588,PFAM:PF08032,TIGRFAM:TIGR00186,NCBI_GP:EGT83259.1;Name=EGT83259.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:0008168;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||,RNA methyltransferase activity|0008173||,methyltransferase activity|0008168||;go_process=RNA processing|0006396||;locus_tag=GGE_0136;product=putative methyltransferase-like protein;protein_id=EGT83259.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97784 98519 . - . ID=id-GGE_0136;Note=multi-dom%3B label: PRK11181;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97784 98513 . - . ID=id-GGE_0136-2;Dbxref=InterPro:IPR004441,TIGRFAM:TIGR00186;Note=rrna_methyl_3: rna methyltransferase%2C t~rna methyltransferase trmh%2C group 3;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97784 98015 . - . ID=id-GGE_0136-3;Note=superfamily:SSF55315~l30e-like;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97784 98009 . - . ID=id-GGE_0136-4;Note=Gene3D:3.30.1330.30;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97790 98510 . - . ID=id-GGE_0136-5;Note=HMMPanther:PTHR12029:SF7~rrna methylase~HMMPanther:PTHR12029~family not named;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97799 98000 . - . ID=id-GGE_0136-6;Dbxref=InterPro:IPR013123,PFAM:PF08032;Note=superfamily~spou_sub_bind~rna 2-o ribose methyltransferase%2C substrate binding%3B label: SpoU_sub_bind superfamily;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 97988 98315 . - . ID=id-GGE_0136-7;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98051 98252 . - . ID=id-GGE_0136-8;Note=Gene3D:3.40.1280.10;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98069 98213 . - . ID=id-GGE_0136-9;Note=superfamily%3B label: SpoU_methylase superfamily;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98072 98210 . - . ID=id-GGE_0136-10;Dbxref=InterPro:IPR001537,PFAM:PF00588;Note=spou_methylase~trna/rrna methyltransferase%2C spou;gbkey=misc_feature;gene=rlmB;locus_tag=GGE_0136 GCA_000222085.2|AFQR01000004.1 Genbank gene 98580 100928 . - . ID=gene-GGE_0137;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank CDS 98580 100928 . - 0 ID=cds-EGT83260.1;Parent=gene-GGE_0137;Dbxref=GeneID:1174933,InterPro:IPR001900,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR011805,InterPro:IPR012340,InterPro:IPR013223,InterPro:IPR013668,InterPro:IPR016027,InterPro:IPR022966,PFAM:PF00575,PFAM:PF00773,PFAM:PF08206,PFAM:PF08461,TIGRFAM:TIGR00358,TIGRFAM:TIGR02063,NCBI_GP:EGT83260.1;Name=EGT83260.1;Ontology_term=GO:0016070,GO:0003723,GO:0004518,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||,nuclease activity|0004518||,ribonuclease activity|0004540||;go_process=RNA metabolic process|0016070||;locus_tag=GGE_0137;product=Ribonuclease R;protein_id=EGT83260.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98625 98634 . - . ID=id-GGE_0137;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98628 100881 . - . ID=id-GGE_0137-2;Dbxref=InterPro:IPR011805;Note=HMMPanther:PTHR23355:SF9~ribonuclease r~ribonuclease r%2C bacterial~HMMPanther:PTHR23355~family not named;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98658 100704 . - . ID=id-GGE_0137-3;Dbxref=InterPro:IPR011805,TIGRFAM:TIGR02063;Note=rnase_r: ribonuclease r~ribonuclease r%2C bacterial;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98670 98760 . - . ID=id-GGE_0137-4;Note=superfamily%3B label: HTH_12 superfamily;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98673 98763 . - . ID=id-GGE_0137-5;Dbxref=InterPro:IPR013668,PFAM:PF08461;Note=hth_12~ribonuclease r winged-helix domain;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98805 100554 . - . ID=id-GGE_0137-6;Dbxref=InterPro:IPR004476,TIGRFAM:TIGR00358;Note=multi-dom~3_prime_rnase: vacb and rnase ii family~ribonuclease ii/ribonuclease r%2C bacteria%3B label: 3_prime_RNase;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 99384 99564 . - . ID=id-GGE_0137-7;Dbxref=InterPro:IPR001900,PFAM:PF00773;Note=rnb~ribonuclease ii/r;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 99384 99558 . - . ID=id-GGE_0137-8;Note=superfamily%3B label: RNB superfamily;gbkey=misc_feature;gene=rnr;locus_tag=GGE_0137 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98616 99003 . + . ID=id-AFQR01000004.1:98616..99003;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98622 100803 . + . ID=id-AFQR01000004.1:98622..100803;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98646 98739 . + . ID=id-AFQR01000004.1:98646..98739;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98655 100854 . + . ID=id-AFQR01000004.1:98655..100854;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98655 100266 . + . ID=id-AFQR01000004.1:98655..100266;Dbxref=InterPro:IPR022966;Note=PatternScan:PS01175~ribonuclease_ii~ribonuclease ii/r%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98718 98865 . + . ID=id-AFQR01000004.1:98718..98865;Note=superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98754 98865 . + . ID=id-AFQR01000004.1:98754..98865;Dbxref=InterPro:IPR013223,PFAM:PF08206;Note=ob_rnb~ribonuclease b ob domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98796 98850 . + . ID=id-AFQR01000004.1:98796..98850;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98826 100533 . + . ID=id-AFQR01000004.1:98826..100533;Dbxref=InterPro:IPR003029;Note=ProfileScan:PS50126~s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98826 100530 . + . ID=id-AFQR01000004.1:98826..100530;Note=specific~superfamily%3B label: S1_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98829 100527 . + . ID=id-AFQR01000004.1:98829..100527;Dbxref=InterPro:IPR003029,PFAM:PF00575;Note=s1~ribosomal protein s1%2C rna-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98859 100533 . + . ID=id-AFQR01000004.1:98859..100533;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 98889 100524 . + . ID=id-AFQR01000004.1:98889..100524;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 100771 100780 . + . ID=id-AFQR01000004.1:100771..100780;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 101032 102090 . - . ID=gene-GGE_0138;Name=GGE_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0138 GCA_000222085.2|AFQR01000004.1 Genbank CDS 101032 102090 . - 0 ID=cds-EGT83261.1;Parent=gene-GGE_0138;Dbxref=GeneID:260913734,InterPro:IPR007272,PFAM:PF04143,NCBI_GP:EGT83261.1;Name=EGT83261.1;Note=ZP_05920210%3B Conserved conserved hypothetical protein;gbkey=CDS;locus_tag=GGE_0138;product=hypothetical protein;protein_id=EGT83261.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101053 101086 . - . ID=id-GGE_0138;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0138 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101053 101074 . - . ID=id-GGE_0138-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0138 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101074 101503 . + . ID=id-AFQR01000004.1:101074..101503;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101086 102022 . + . ID=id-AFQR01000004.1:101086..102022;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101086 101959 . + . ID=id-AFQR01000004.1:101086..101959;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101086 101845 . + . ID=id-AFQR01000004.1:101086..101845;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101086 101605 . + . ID=id-AFQR01000004.1:101086..101605;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101092 101935 . + . ID=id-AFQR01000004.1:101092..101935;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101092 101290 . + . ID=id-AFQR01000004.1:101092..101290;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101092 101197 . + . ID=id-AFQR01000004.1:101092..101197;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101101 101830 . + . ID=id-AFQR01000004.1:101101..101830;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101101 101719 . + . ID=id-AFQR01000004.1:101101..101719;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101101 101494 . + . ID=id-AFQR01000004.1:101101..101494;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101101 101392 . + . ID=id-AFQR01000004.1:101101..101392;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 101161 101830 . + . ID=id-AFQR01000004.1:101161..101830;Dbxref=InterPro:IPR007272,PFAM:PF04143;Note=duf395~domain of unknown function duf395%2C yeee/yede;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102233 102242 . + . ID=id-AFQR01000004.1:102233..102242;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 102319 104205 . + . ID=gene-GGE_0139;Name=GGE_0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank CDS 102319 104205 . + 0 ID=cds-EGT83262.1;Parent=gene-GGE_0139;Dbxref=GeneID:301155626,InterPro:IPR005494,InterPro:IPR007921,InterPro:IPR016185,PFAM:PF03738,PFAM:PF05257,NCBI_GP:EGT83262.1;Name=EGT83262.1;Note=CBW15094;Ontology_term=GO:0005524,GO:0003824;gbkey=CDS;go_function=ATP binding|0005524||,catalytic activity|0003824||;locus_tag=GGE_0139;product=fused glutathionylspermidine amidase/glutathionylspermidine synthetase;protein_id=EGT83262.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102328 104182 . + . ID=id-GGE_0139;Note=multi-dom%3B label: PRK10507;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102355 102892 . + . ID=id-GGE_0139-2;Note=superfamily:SSF54001~cysteine proteinases;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102427 102751 . + . ID=id-GGE_0139-3;Dbxref=InterPro:IPR007921;Note=ProfileScan:PS50911~chap~cysteine%2C histidine-dependent amidohydrolase/peptidase;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102475 102691 . + . ID=id-GGE_0139-4;Dbxref=InterPro:IPR007921,PFAM:PF05257;Note=chap~cysteine%2C histidine-dependent amidohydrolase/peptidase;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102481 102667 . + . ID=id-GGE_0139-5;Note=superfamily%3B label: NLPC_P60 superfamily;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102928 103570 . + . ID=id-GGE_0139-6;Note=superfamily:SSF56059~glutathione synthetase atp-binding domain-like;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 103000 103504 . + . ID=id-GGE_0139-7;Note=superfamily%3B label: GSP_synth superfamily;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 103000 103501 . + . ID=id-GGE_0139-8;Dbxref=InterPro:IPR005494,PFAM:PF03738;Note=gsp_synth~glutathionylspermidine synthase;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 103743 103752 . + . ID=id-GGE_0139-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0139 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 102715 103468 . - . ID=id-AFQR01000004.1:102715..103468;Dbxref=InterPro:IPR016185;Note=superfamily:SSF52440~preatp-grasp domain~preatp-grasp-like fold;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 104416 108933 . + . ID=gene-GGE_0140;Name=GGE_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank CDS 104416 108933 . + 0 ID=cds-EGT83263.1;Parent=gene-GGE_0140;Dbxref=GeneID:261379128,InterPro:IPR000710,InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,InterPro:IPR012332,PFAM:PF02395,PFAM:PF03212,PFAM:PF03797,TIGRFAM:TIGR01414,NCBI_GP:EGT83263.1;Name=EGT83263.1;Note=ZP_05983701;Ontology_term=GO:0006508,GO:0019867,GO:0004252;gbkey=CDS;go_component=outer membrane|0019867||;go_function=serine-type endopeptidase activity|0004252||;go_process=proteolysis|0006508||;locus_tag=GGE_0140;product=igA-specific serine endopeptidase;protein_id=EGT83263.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104449 104449 . + . ID=id-GGE_0140;Note=seg;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104473 106786 . + . ID=id-GGE_0140-2;Dbxref=InterPro:IPR000710,PFAM:PF02395;Note=peptidase_s6~peptidase s6%2C iga endopeptidase;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104494 106768 . + . ID=id-GGE_0140-3;Note=multi-dom%3B label: Peptidase_S6;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105574 106102 . + . ID=id-GGE_0140-4;Dbxref=InterPro:IPR011050;Note=superfamily:SSF51126~pectin lyase-like~pectin lyase fold/virulence factor;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105721 105943 . + . ID=id-GGE_0140-5;Dbxref=InterPro:IPR012332;Note=Gene3D:2.160.20.20~phage p22 tailspike;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 107911 107920 . + . ID=id-GGE_0140-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0140 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104452 106342 . - . ID=id-AFQR01000004.1:104452..106342;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104461 107182 . - . ID=id-AFQR01000004.1:104461..107182;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104470 106219 . - . ID=id-AFQR01000004.1:104470..106219;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104473 105136 . - . ID=id-AFQR01000004.1:104473..105136;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104479 104818 . - . ID=id-AFQR01000004.1:104479..104818;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104479 104515 . - . ID=id-AFQR01000004.1:104479..104515;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104485 106357 . - . ID=id-AFQR01000004.1:104485..106357;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104485 106288 . - . ID=id-AFQR01000004.1:104485..106288;Dbxref=InterPro:IPR000710;Note=FPrintScan:PR00921~igaserptase~peptidase s6%2C iga endopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104503 107311 . - . ID=id-AFQR01000004.1:104503..107311;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104629 107512 . - . ID=id-AFQR01000004.1:104629..107512;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104755 106891 . - . ID=id-AFQR01000004.1:104755..106891;Dbxref=InterPro:IPR004899,PFAM:PF03212;Note=pertactin~pertactin%2C central region;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104974 108166 . - . ID=id-AFQR01000004.1:104974..108166;Dbxref=InterPro:IPR005546,PFAM:PF03797;Note=autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 104980 108160 . - . ID=id-AFQR01000004.1:104980..108160;Note=superfamily%3B label: Autotransporter superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105127 106537 . - . ID=id-AFQR01000004.1:105127..106537;Note=specific~superfamily%3B label: PL1_Passenger_AT;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105193 108157 . - . ID=id-AFQR01000004.1:105193..108157;Dbxref=InterPro:IPR005546;Note=ProfileScan:PS51208~autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105322 107272 . - . ID=id-AFQR01000004.1:105322..107272;Note=multi-dom%3B label: SMC_prok_B;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 105325 108025 . - . ID=id-AFQR01000004.1:105325..108025;Dbxref=InterPro:IPR005546;Note=superfamily:SSF103515~autotransporter~autotransporter beta-domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 106420 106930 . - . ID=id-AFQR01000004.1:106420..106930;Dbxref=InterPro:IPR006315,TIGRFAM:TIGR01414;Note=autotrans_barl: outer membrane autotra~outer membrane autotransporter barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 109129 110439 . - . ID=gene-GGE_0141;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=GGE_0141 GCA_000222085.2|AFQR01000004.1 Genbank CDS 109129 110439 . - 0 ID=cds-EGT83264.1;Parent=gene-GGE_0141;Dbxref=GeneID:3023408,InterPro:IPR004685,PFAM:PF05525,TIGRFAM:TIGR00796,NCBI_GP:EGT83264.1;Name=EGT83264.1;Ontology_term=GO:0015803,GO:0016021,GO:0015658;gbkey=CDS;gene=brnQ;go_component=integral to membrane|0016021||;go_function=branched-chain aliphatic amino acid transmembrane transporter activity|0015658||;go_process=branched-chain aliphatic amino acid transport|0015803||;locus_tag=GGE_0141;product=Branched-chain amino acid transport system carrier protein;protein_id=EGT83264.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109138 110416 . - . ID=id-GGE_0141;Note=superfamily%3B label: Branch_AA_trans superfamily;gbkey=misc_feature;gene=brnQ;locus_tag=GGE_0141 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109141 110407 . - . ID=id-GGE_0141-2;Dbxref=InterPro:IPR004685,PFAM:PF05525;Note=branch_aa_trans~branched-chain amino acid transport system ii carrier protein;gbkey=misc_feature;gene=brnQ;locus_tag=GGE_0141 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109150 109189 . - . ID=id-GGE_0141-3;Note=transmembrane_regions;gbkey=misc_feature;gene=brnQ;locus_tag=GGE_0141 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109162 110347 . - . ID=id-GGE_0141-4;Dbxref=InterPro:IPR004685,TIGRFAM:TIGR00796;Note=livcs: branched-chain amino acid transport s~branched-chain amino acid transport system ii carrier protein;gbkey=misc_feature;gene=brnQ;locus_tag=GGE_0141 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109162 109585 . + . ID=id-AFQR01000004.1:109162..109585;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109165 109840 . + . ID=id-AFQR01000004.1:109165..109840;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109189 109483 . + . ID=id-AFQR01000004.1:109189..109483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 110359 . + . ID=id-AFQR01000004.1:109198..110359;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 110233 . + . ID=id-AFQR01000004.1:109198..110233;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 110146 . + . ID=id-AFQR01000004.1:109198..110146;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 110065 . + . ID=id-AFQR01000004.1:109198..110065;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109960 . + . ID=id-AFQR01000004.1:109198..109960;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109813 . + . ID=id-AFQR01000004.1:109198..109813;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109687 . + . ID=id-AFQR01000004.1:109198..109687;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109561 . + . ID=id-AFQR01000004.1:109198..109561;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109357 . + . ID=id-AFQR01000004.1:109198..109357;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 109198 109252 . + . ID=id-AFQR01000004.1:109198..109252;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 110655 111821 . + . ID=gene-GGE_0142;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank CDS 110655 111821 . + 0 ID=cds-EGT83265.1;Parent=gene-GGE_0142;Dbxref=GeneID:1171702,InterPro:IPR004670,InterPro:IPR023171,PFAM:PF06965,TIGRFAM:TIGR00773,NCBI_GP:EGT83265.1;Name=EGT83265.1;Ontology_term=GO:0006885,GO:0006814,GO:0016021;gbkey=CDS;gene=nhaA;go_component=integral to membrane|0016021||;go_process=regulation of pH|0006885||,sodium ion transport|0006814||;locus_tag=GGE_0142;product=Na+/H+ antiporter nhaA;protein_id=EGT83265.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110661 111810 . + . ID=id-GGE_0142;Note=superfamily%3B label: Na_H_antiport_1 superfamily;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110667 111801 . + . ID=id-GGE_0142-2;Dbxref=InterPro:IPR023171;Note=Gene3D:1.20.1530.10~na/h antiporter domain;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110670 111804 . + . ID=id-GGE_0142-3;Dbxref=InterPro:IPR004670;Note=HAMAP:MF_01844~nhaa~na+/h+ antiporter nhaa;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110670 111786 . + . ID=id-GGE_0142-4;Dbxref=InterPro:IPR004670,PFAM:PF06965;Note=na_h_antiport_1~na+/h+ antiporter nhaa;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110679 111777 . + . ID=id-GGE_0142-5;Dbxref=InterPro:IPR004670,TIGRFAM:TIGR00773;Note=nhaa: na+/h+ antiporter nhaa~na+/h+ antiporter nhaa;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110694 110724 . + . ID=id-GGE_0142-6;Note=transmembrane_regions;gbkey=misc_feature;gene=nhaA;locus_tag=GGE_0142 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110691 111519 . - . ID=id-AFQR01000004.1:110691..111519;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110712 111105 . - . ID=id-AFQR01000004.1:110712..111105;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110715 111204 . - . ID=id-AFQR01000004.1:110715..111204;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111735 . - . ID=id-AFQR01000004.1:110724..111735;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111639 . - . ID=id-AFQR01000004.1:110724..111639;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111513 . - . ID=id-AFQR01000004.1:110724..111513;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111417 . - . ID=id-AFQR01000004.1:110724..111417;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111291 . - . ID=id-AFQR01000004.1:110724..111291;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111117 . - . ID=id-AFQR01000004.1:110724..111117;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 111021 . - . ID=id-AFQR01000004.1:110724..111021;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 110724 110934 . - . ID=id-AFQR01000004.1:110724..110934;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 111829 111838 . + . ID=id-AFQR01000004.1:111829..111838;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 112140 112457 . - . ID=gene-GGE_0143;Name=GGE_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0143 GCA_000222085.2|AFQR01000004.1 Genbank CDS 112140 112457 . - 0 ID=cds-EGT83266.1;Parent=gene-GGE_0143;Dbxref=GeneID:325577160,NCBI_GP:EGT83266.1;Name=EGT83266.1;Note=ZP_08147644~HMPREF9417_0385;gbkey=CDS;locus_tag=GGE_0143;product=Hypothetical protein;protein_id=EGT83266.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112476 112485 . + . ID=id-AFQR01000004.1:112476..112485;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112494 112503 . - . ID=id-AFQR01000004.1:112494..112503;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112663 112672 . - . ID=id-AFQR01000004.1:112663..112672;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 112682 115252 . - . ID=gene-GGE_0144;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank CDS 112682 115252 . - 0 ID=cds-EGT83267.1;Parent=gene-GGE_0144;Dbxref=GeneID:1168973,InterPro:IPR001270,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,InterPro:IPR017730,InterPro:IPR018368,InterPro:IPR019489,InterPro:IPR023150,PFAM:PF00004,PFAM:PF02861,PFAM:PF07724,PFAM:PF10431,TIGRFAM:TIGR03346,NCBI_GP:EGT83267.1;Name=EGT83267.1;Ontology_term=GO:0019538,GO:0016485,GO:0009408,GO:0005737,GO:0005524;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||;go_process=protein metabolic process|0019538||,protein processing|0016485||,response to heat|0009408||;locus_tag=GGE_0144;product=Chaperone protein ClpB;protein_id=EGT83267.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112682 115241 . - . ID=id-GGE_0144;Note=HMMPanther:PTHR11638:SF18~chaperone clpb~HMMPanther:PTHR11638~family not named;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112682 113126 . - . ID=id-GGE_0144-2;Dbxref=InterPro:IPR023150;Note=Gene3D:1.10.1780.10~double clp-n motif;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112694 113141 . - . ID=id-GGE_0144-3;Note=superfamily:SSF81923~double clp-n motif;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112700 115232 . - . ID=id-GGE_0144-4;Dbxref=InterPro:IPR017730,TIGRFAM:TIGR03346;Note=chaperone_clpb: atp-dependent chaperon~chaperonin clpb;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112700 115214 . - . ID=id-GGE_0144-5;Note=multi-dom%3B label: chaperone_ClpB;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112733 112841 . - . ID=id-GGE_0144-6;Note=superfamily%3B label: Clp_N superfamily;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112733 112838 . - . ID=id-GGE_0144-7;Dbxref=InterPro:IPR004176,PFAM:PF02861;Note=clp_n~clp;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113153 113849 . - . ID=id-GGE_0144-8;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113162 113231 . - . ID=id-GGE_0144-9;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=clpB;locus_tag=GGE_0144 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112721 113564 . + . ID=id-AFQR01000004.1:112721..113564;Dbxref=InterPro:IPR018368;Note=PatternScan:PS00870~clpab_1~chaperonin clpa/b%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112724 114626 . + . ID=id-AFQR01000004.1:112724..114626;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112727 114806 . + . ID=id-AFQR01000004.1:112727..114806;Dbxref=InterPro:IPR001270;Note=FPrintScan:PR00300~clpproteasea~chaperonin clpa/b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112730 113945 . + . ID=id-AFQR01000004.1:112730..113945;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112733 113003 . + . ID=id-AFQR01000004.1:112733..113003;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112739 114707 . + . ID=id-AFQR01000004.1:112739..114707;Dbxref=InterPro:IPR001270;Note=FPrintScan:PR00300~clpproteasea~chaperonin clpa/b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112739 114620 . + . ID=id-AFQR01000004.1:112739..114620;Dbxref=InterPro:IPR001270;Note=FPrintScan:PR00300~clpproteasea~chaperonin clpa/b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112739 114575 . + . ID=id-AFQR01000004.1:112739..114575;Dbxref=InterPro:IPR001270;Note=PatternScan:PS00871~clpab_2~chaperonin clpa/b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112739 114485 . + . ID=id-AFQR01000004.1:112739..114485;Dbxref=InterPro:IPR001270;Note=FPrintScan:PR00300~clpproteasea~chaperonin clpa/b;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112748 114098 . + . ID=id-AFQR01000004.1:112748..114098;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112748 113438 . + . ID=id-AFQR01000004.1:112748..113438;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112751 113996 . + . ID=id-AFQR01000004.1:112751..113996;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112835 113918 . + . ID=id-AFQR01000004.1:112835..113918;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112838 112964 . + . ID=id-AFQR01000004.1:112838..112964;Dbxref=InterPro:IPR004176,PFAM:PF02861;Note=clp_n~clp;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112916 115010 . + . ID=id-AFQR01000004.1:112916..115010;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112937 114977 . + . ID=id-AFQR01000004.1:112937..114977;Dbxref=InterPro:IPR019489,PFAM:PF10431;Note=clpb_d2-small~clp atpase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112943 113711 . + . ID=id-AFQR01000004.1:112943..113711;Note=Gene3D:1.10.8.60;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 112946 114977 . + . ID=id-AFQR01000004.1:112946..114977;Note=superfamily%3B label: ClpB_D2-small superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113087 113291 . + . ID=id-AFQR01000004.1:113087..113291;Dbxref=InterPro:IPR003959,PFAM:PF00004;Note=aaa~atpase%2C aaa-type%2C core;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113165 113225 . + . ID=id-AFQR01000004.1:113165..113225;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113171 114470 . + . ID=id-AFQR01000004.1:113171..114470;Dbxref=InterPro:IPR013093,PFAM:PF07724;Note=aaa_2~atpase%2C aaa-2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113264 114395 . + . ID=id-AFQR01000004.1:113264..114395;Note=specific~superfamily%3B label: AAA;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113357 114335 . + . ID=id-AFQR01000004.1:113357..114335;Note=Gene3D:3.40.50.300;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 113603 114320 . + . ID=id-AFQR01000004.1:113603..114320;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115137 115146 . + . ID=id-AFQR01000004.1:115137..115146;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 115381 116013 . - . ID=gene-GGE_0145;Name=GGE_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank CDS 115381 116013 . - 0 ID=cds-EGT83268.1;Parent=gene-GGE_0145;Dbxref=GeneID:1176089,InterPro:IPR002698,PFAM:PF01812,PIR:PIRSF006806,TIGRFAM:TIGR02727,NCBI_GP:EGT83268.1;Name=EGT83268.1;Note=HI_0858;Ontology_term=GO:0009396,GO:0030272,GO:0005524;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||,ATP binding|0005524||;go_process=folic acid-containing compound biosynthetic process|0009396||;locus_tag=GGE_0145;product=putative transferase-like protein;protein_id=EGT83268.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115381 115942 . - . ID=id-GGE_0145;Dbxref=InterPro:IPR002698,PIR:PIRSF006806;Note=predicted 5-formyltetrahydrofolate cyclo-ligase~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115381 115924 . - . ID=id-GGE_0145-2;Dbxref=InterPro:IPR002698;Note=HMMPanther:PTHR23407:SF1~5-formyltetrahydrofolate cyclo-ligase~5-formyltetrahydrofolate cyclo-ligase~HMMPanther:PTHR23407~family not named;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115393 115927 . - . ID=id-GGE_0145-3;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115399 115927 . - . ID=id-GGE_0145-4;Dbxref=InterPro:IPR002698,TIGRFAM:TIGR02727;Note=mthfs_bact: 5-formyltetrahydrofolate cyclo~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115399 115909 . - . ID=id-GGE_0145-5;Dbxref=InterPro:IPR002698;Note=Gene3D:3.40.50.10420~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115399 115447 . - . ID=id-GGE_0145-6;Note=coiled-coil;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115402 115915 . - . ID=id-GGE_0145-7;Dbxref=InterPro:IPR002698,PFAM:PF01812;Note=5-fthf_cyc-lig~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115441 115936 . - . ID=id-GGE_0145-8;Dbxref=InterPro:IPR002698;Note=HMMPanther:PTHR23407:SF1~5-formyltetrahydrofolate cyclo-ligase~5-formyltetrahydrofolate cyclo-ligase~HMMPanther:PTHR23407~family not named;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115447 115948 . - . ID=id-GGE_0145-9;Dbxref=InterPro:IPR002698,PIR:PIRSF006806;Note=predicted 5-formyltetrahydrofolate cyclo-ligase~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115462 115927 . - . ID=id-GGE_0145-10;Note=superfamily:SSF100950~nagb/rpia/coa transferase-like;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115468 115927 . - . ID=id-GGE_0145-11;Dbxref=InterPro:IPR002698,TIGRFAM:TIGR02727;Note=mthfs_bact: 5-formyltetrahydrofolate cyclo~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115468 115909 . - . ID=id-GGE_0145-12;Dbxref=InterPro:IPR002698;Note=Gene3D:3.40.50.10420~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115471 115915 . - . ID=id-GGE_0145-13;Dbxref=InterPro:IPR002698,PFAM:PF01812;Note=5-fthf_cyc-lig~5-formyltetrahydrofolate cyclo-ligase;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115516 115783 . - . ID=id-GGE_0145-14;Note=superfamily%3B label: 5-FTHF_cyc-lig superfamily;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115585 115783 . - . ID=id-GGE_0145-15;Note=superfamily%3B label: 5-FTHF_cyc-lig superfamily;gbkey=misc_feature;locus_tag=GGE_0145 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115435 115510 . + . ID=id-AFQR01000004.1:115435..115510;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115435 115441 . + . ID=id-AFQR01000004.1:115435..115441;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 115447 115468 . + . ID=id-AFQR01000004.1:115447..115468;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116389 116398 . - . ID=id-AFQR01000004.1:116389..116398;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 116405 116707 . - . ID=gene-GGE_0146;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=GGE_0146 GCA_000222085.2|AFQR01000004.1 Genbank CDS 116405 116707 . - 0 ID=cds-EGT83269.1;Parent=gene-GGE_0146;Dbxref=GeneID:1176092,InterPro:IPR007838,PFAM:PF05164,NCBI_GP:EGT83269.1;Name=EGT83269.1;gbkey=CDS;gene=zapA;locus_tag=GGE_0146;product=Cell division protein ZapA;protein_id=EGT83269.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116417 116696 . - . ID=id-GGE_0146;Note=superfamily%3B label: ZapA superfamily;gbkey=misc_feature;gene=zapA;locus_tag=GGE_0146 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116420 116681 . - . ID=id-GGE_0146-2;Dbxref=InterPro:IPR007838;Note=superfamily:SSF102829~cell division protein zapa-like~cell division protein zapa-like;gbkey=misc_feature;gene=zapA;locus_tag=GGE_0146 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116423 116663 . - . ID=id-GGE_0146-3;Dbxref=InterPro:IPR007838,PFAM:PF05164;Note=zapa~cell division protein zapa-like;gbkey=misc_feature;gene=zapA;locus_tag=GGE_0146 GCA_000222085.2|AFQR01000004.1 Genbank gene 116856 119663 . + . ID=gene-GGE_0147;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank CDS 116856 119663 . + 0 ID=cds-EGT83270.1;Parent=gene-GGE_0147;Dbxref=GeneID:1169402,InterPro:IPR001098,InterPro:IPR002298,InterPro:IPR002562,InterPro:IPR012337,InterPro:IPR018320,InterPro:IPR019760,InterPro:IPR020045,InterPro:IPR020046,InterPro:IPR020047,PFAM:PF00476,PFAM:PF01367,PFAM:PF01612,PFAM:PF02739,TIGRFAM:TIGR00593,NCBI_GP:EGT83270.1;Name=EGT83270.1;Ontology_term=GO:0006260,GO:0006139,GO:0005622,GO:0008408,GO:0008409,GO:0003677,GO:0003887,GO:0003824,GO:0003676;gbkey=CDS;gene=polA;go_component=intracellular|0005622||;go_function=3'-5' exonuclease activity|0008408||,5'-3' exonuclease activity|0008409||,DNA binding|0003677||,DNA-directed DNA polymerase activity|0003887||,catalytic activity|0003824||,nucleic acid binding|0003676||;go_process=DNA replication|0006260||,nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||;locus_tag=GGE_0147;product=DNA polymerase I;protein_id=EGT83270.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116874 119646 . + . ID=id-GGE_0147;Note=multi-dom%3B label: PRK05755;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116874 117351 . + . ID=id-GGE_0147-2;Note=superfamily:SSF88723~pin domain-like;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116880 117393 . + . ID=id-GGE_0147-3;Note=Gene3D:3.40.50.1010;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116880 117342 . + . ID=id-GGE_0147-4;Dbxref=InterPro:IPR020046,PFAM:PF02739;Note=5_3_exonuc_n~5'-3' exonuclease%2C alpha-helical arch;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116883 119637 . + . ID=id-GGE_0147-5;Dbxref=InterPro:IPR018320,TIGRFAM:TIGR00593;Note=HMMPanther:PTHR10133:SF20~dna polymerase i~HMMPanther:PTHR10133~dna polymerase i~pola: dna polymerase i~dna polymerase 1;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116883 117357 . + . ID=id-GGE_0147-6;Note=specific~superfamily%3B label: PIN_53EXO;gbkey=misc_feature;gene=polA;locus_tag=GGE_0147 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116892 119319 . - . ID=id-AFQR01000004.1:116892..119319;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116892 119253 . - . ID=id-AFQR01000004.1:116892..119253;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116892 117546 . - . ID=id-AFQR01000004.1:116892..117546;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116898 119502 . - . ID=id-AFQR01000004.1:116898..119502;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116898 119070 . - . ID=id-AFQR01000004.1:116898..119070;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116904 118914 . - . ID=id-AFQR01000004.1:116904..118914;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116907 119415 . - . ID=id-AFQR01000004.1:116907..119415;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116916 119142 . - . ID=id-AFQR01000004.1:116916..119142;Dbxref=InterPro:IPR019760;Note=PatternScan:PS00447~dna_polymerase_a~dna-directed dna polymerase%2C family a%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116925 118845 . - . ID=id-AFQR01000004.1:116925..118845;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116928 118980 . - . ID=id-AFQR01000004.1:116928..118980;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 116934 119142 . - . ID=id-AFQR01000004.1:116934..119142;Dbxref=InterPro:IPR002298;Note=FPrintScan:PR00868~dnapoli~dna polymerase a;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117057 117417 . - . ID=id-AFQR01000004.1:117057..117417;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117096 117375 . - . ID=id-AFQR01000004.1:117096..117375;Note=specific~superfamily%3B label: H3TH_53EXO;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117174 119016 . - . ID=id-AFQR01000004.1:117174..119016;Note=Gene3D:1.10.150.20;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117177 117369 . - . ID=id-AFQR01000004.1:117177..117369;Dbxref=InterPro:IPR020047,PFAM:PF01367;Note=5_3_exonuc~5'-3' exonuclease%2C sam-fold domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117186 119334 . - . ID=id-AFQR01000004.1:117186..119334;Note=Gene3D:3.30.70.370;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117189 117366 . - . ID=id-AFQR01000004.1:117189..117366;Dbxref=InterPro:IPR020045;Note=superfamily:SSF47807~5' to 3' exonuclease subdomain~5'-3' exonuclease subdomain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117198 118509 . - . ID=id-AFQR01000004.1:117198..118509;Note=Gene3D:1.20.1060.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117417 117873 . - . ID=id-AFQR01000004.1:117417..117873;Dbxref=InterPro:IPR002562,PFAM:PF01612;Note=3_5_exonuc~3'-5' exonuclease;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117438 117918 . - . ID=id-AFQR01000004.1:117438..117918;Note=specific~superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117438 117855 . - . ID=id-AFQR01000004.1:117438..117855;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117498 117867 . - . ID=id-AFQR01000004.1:117498..117867;Note=Gene3D:3.30.420.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117987 118524 . - . ID=id-AFQR01000004.1:117987..118524;Note=specific~superfamily%3B label: DNA_pol_A superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 117993 118524 . - . ID=id-AFQR01000004.1:117993..118524;Dbxref=InterPro:IPR001098,PFAM:PF00476;Note=dna_pol_a~dna-directed dna polymerase%2C family a%2C palm domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 118077 118443 . - . ID=id-AFQR01000004.1:118077..118443;Note=superfamily:SSF56672~dna/rna polymerases;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 119675 119989 . + . ID=gene-GGE_0148;Name=GGE_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0148 GCA_000222085.2|AFQR01000004.1 Genbank CDS 119675 119989 . + 0 ID=cds-EGT83271.1;Parent=gene-GGE_0148;Dbxref=GeneID:325577645,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,PFAM:PF07883,NCBI_GP:EGT83271.1;Name=EGT83271.1;Note=ZP_08147920;gbkey=CDS;locus_tag=GGE_0148;product=cupin domain protein;protein_id=EGT83271.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 119702 119954 . + . ID=id-GGE_0148;Note=superfamily%3B label: Cupin_2 superfamily;gbkey=misc_feature;locus_tag=GGE_0148 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 119714 119939 . + . ID=id-GGE_0148-2;Dbxref=InterPro:IPR014710;Note=Gene3D:2.60.120.10~rmlc-like jelly roll fold;gbkey=misc_feature;locus_tag=GGE_0148 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 119720 119939 . + . ID=id-GGE_0148-3;Dbxref=InterPro:IPR011051;Note=superfamily:SSF51182~rmlc-like cupins~cupin%2C rmlc-type;gbkey=misc_feature;locus_tag=GGE_0148 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 119792 119855 . + . ID=id-GGE_0148-4;Dbxref=InterPro:IPR013096,PFAM:PF07883;Note=cupin_2~cupin 2%2C conserved barrel;gbkey=misc_feature;locus_tag=GGE_0148 GCA_000222085.2|AFQR01000004.1 Genbank gene 120033 121301 . + . ID=gene-GGE_0149;Name=GGE_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank CDS 120033 121301 . + 0 ID=cds-EGT83272.1;Parent=gene-GGE_0149;Dbxref=GeneID:301154828,InterPro:IPR005130,InterPro:IPR021144,PFAM:PF03313,PIR:PIRSF006054,NCBI_GP:EGT83272.1;Name=EGT83272.1;Note=CBW14291;gbkey=CDS;locus_tag=GGE_0149;product=Hypothetical protein;protein_id=EGT83272.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120033 121293 . + . ID=id-GGE_0149;Dbxref=InterPro:IPR021144,PIR:PIRSF006054;Note=multi-dom~uncharacterised conserved protein%2C ucp006054 type~uncharacterised protein family upf0597%3B label: COG3681;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120033 121287 . + . ID=id-GGE_0149-2;Dbxref=InterPro:IPR021144;Note=HAMAP:MF_01845~upf0597~uncharacterised protein family upf0597;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120144 120225 . + . ID=id-GGE_0149-3;Note=superfamily%3B label: SDH_alpha superfamily;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120147 121164 . + . ID=id-GGE_0149-4;Dbxref=InterPro:IPR005130,PFAM:PF03313;Note=sdh_alpha~serine dehydratase-like%2C alpha subunit;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120174 121287 . + . ID=id-GGE_0149-5;Dbxref=InterPro:IPR021144;Note=HAMAP:MF_01845~upf0597~uncharacterised protein family upf0597;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120174 121275 . + . ID=id-GGE_0149-6;Dbxref=InterPro:IPR005130,PFAM:PF03313;Note=sdh_alpha~serine dehydratase-like%2C alpha subunit;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120174 120333 . + . ID=id-GGE_0149-7;Note=superfamily%3B label: SDH_alpha superfamily;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120189 120243 . + . ID=id-GGE_0149-8;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120615 120843 . + . ID=id-GGE_0149-9;Note=superfamily%3B label: SDH_alpha superfamily;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120615 120702 . + . ID=id-GGE_0149-10;Note=superfamily%3B label: SDH_alpha superfamily;gbkey=misc_feature;locus_tag=GGE_0149 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120072 120222 . - . ID=id-AFQR01000004.1:120072..120222;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 120213 120222 . - . ID=id-AFQR01000004.1:120213..120222;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121308 121317 . + . ID=id-AFQR01000004.1:121308..121317;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 121417 122178 . - . ID=gene-GGE_0150;Name=GGE_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank CDS 121417 122178 . - 0 ID=cds-EGT83273.1;Parent=gene-GGE_0150;Dbxref=GeneID:1175315,InterPro:IPR009002,InterPro:IPR011576,InterPro:IPR012349,InterPro:IPR014419,InterPro:IPR019595,PFAM:PF01243,PFAM:PF10615,PIR:PIRSF004633,NCBI_GP:EGT83273.1;Name=EGT83273.1;Note=HI_0854;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||;locus_tag=GGE_0150;product=putative fMN-binding split barrel-like protein;protein_id=EGT83273.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121417 122176 . - . ID=id-GGE_0150;Dbxref=InterPro:IPR014419,PIR:PIRSF004633;Note=uncharacterised protein with pyridoxamine 5'-phosphate oxidase domain~uncharacterised conserved protein%2C pyridoxamine 5'-phosphate oxidase domain-containing;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121429 122167 . - . ID=id-GGE_0150-2;Note=multi-dom%3B label: HugZ;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121429 121660 . - . ID=id-GGE_0150-3;Dbxref=InterPro:IPR009002;Note=superfamily:SSF50475~fmn-binding split barrel~fmn-binding split barrel-related;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121429 121630 . - . ID=id-GGE_0150-4;Dbxref=InterPro:IPR019595,PFAM:PF10615;Note=duf2470~domain of unknown function duf2470;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121432 121627 . - . ID=id-GGE_0150-5;Note=superfamily%3B label: DUF2470 superfamily;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121681 121696 . - . ID=id-GGE_0150-6;Note=superfamily%3B label: PNPOx_like superfamily;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121684 121690 . - . ID=id-GGE_0150-7;Dbxref=InterPro:IPR011576,PFAM:PF01243;Note=pyridox_oxidase~pyridoxamine 5'-phosphate oxidase-like%2C fmn-binding domain;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121690 121831 . - . ID=id-GGE_0150-8;Dbxref=InterPro:IPR009002;Note=superfamily:SSF50475~fmn-binding split barrel~fmn-binding split barrel-related;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121693 121825 . - . ID=id-GGE_0150-9;Dbxref=InterPro:IPR012349;Note=Gene3D:2.30.110.10~fmn-binding split barrel;gbkey=misc_feature;locus_tag=GGE_0150 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 121453 122062 . + . ID=id-AFQR01000004.1:121453..122062;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 122356 123999 . - . ID=gene-GGE_0151;Name=hbpA;gbkey=Gene;gene=hbpA;gene_biotype=protein_coding;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank CDS 122356 123999 . - 0 ID=cds-EGT83274.1;Parent=gene-GGE_0151;Dbxref=GeneID:1170181,InterPro:IPR000914,PFAM:PF00496,NCBI_GP:EGT83274.1;Name=EGT83274.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;gene=hbpA;go_function=transporter activity|0005215||;go_process=transport|0006810||;locus_tag=GGE_0151;product=Heme-binding protein A;protein_id=EGT83274.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122356 122413 . - . ID=id-GGE_0151;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122362 122407 . - . ID=id-GGE_0151-2;Note=seg;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122422 123934 . - . ID=id-GGE_0151-3;Note=multi-dom%3B label: DdpA;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122476 123874 . - . ID=id-GGE_0151-4;Note=superfamily:SSF53850~periplasmic binding like protein ii;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122479 123823 . - . ID=id-GGE_0151-5;Note=specific~superfamily%3B label: PBP2_DppA_like;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122512 122860 . - . ID=id-GGE_0151-6;Note=Gene3D:3.90.76.10;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122611 123499 . - . ID=id-GGE_0151-7;Dbxref=InterPro:IPR000914,PFAM:PF00496;Note=sbp_bac_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature;gene=hbpA;locus_tag=GGE_0151 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122425 122626 . + . ID=id-AFQR01000004.1:122425..122626;Dbxref=InterPro:IPR000914;Note=PatternScan:PS01040~sbp_bacterial_5~bacterial extracellular solute-binding protein%2C family 5;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122510 122519 . + . ID=id-AFQR01000004.1:122510..122519;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122629 123016 . + . ID=id-AFQR01000004.1:122629..123016;Note=Gene3D:3.40.190.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 122971 123289 . + . ID=id-AFQR01000004.1:122971..123289;Note=Gene3D:3.10.105.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 124153 125541 . - . ID=gene-GGE_0152;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank CDS 124153 125541 . - 0 ID=cds-EGT83275.1;Parent=gene-GGE_0152;Dbxref=GeneID:1176313,InterPro:IPR001411,InterPro:IPR004638,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,TIGRFAM:TIGR00711,NCBI_GP:EGT83275.1;Name=EGT83275.1;Ontology_term=GO:0046677,GO:0015904,GO:0055085,GO:0006810,GO:0016021,GO:0015520;gbkey=CDS;gene=hsrA;go_component=integral to membrane|0016021||;go_function=tetracycline:hydrogen antiporter activity|0015520||;go_process=response to antibiotic|0046677||,tetracycline transport|0015904||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0152;product=Putative transport protein hsrA;protein_id=EGT83275.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124153 125512 . - . ID=id-GGE_0152;Dbxref=InterPro:IPR016196;Note=superfamily:SSF103473~mfs general substrate transporter~major facilitator superfamily%2C general substrate transporter;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124153 125482 . - . ID=id-GGE_0152-2;Note=multi-dom%3B label: PRK10504;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124180 124222 . - . ID=id-GGE_0152-3;Note=transmembrane_regions;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124183 125488 . - . ID=id-GGE_0152-4;Dbxref=InterPro:IPR020846;Note=ProfileScan:PS50850~mfs~major facilitator superfamily;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124183 125467 . - . ID=id-GGE_0152-5;Dbxref=InterPro:IPR004638,TIGRFAM:TIGR00711;Note=efflux_emrb: drug resistance mfs transpor~drug resistance transporter emrb/qaca subfamily;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124186 124675 . - . ID=id-GGE_0152-6;Note=Gene3D:1.20.1250.20;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124189 124660 . - . ID=id-GGE_0152-7;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124192 124228 . - . ID=id-GGE_0152-8;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124198 125437 . - . ID=id-GGE_0152-9;Note=HMMPanther:PTHR24003:SF57~subfamily not named~HMMPanther:PTHR24003~family not named;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124198 125323 . - . ID=id-GGE_0152-10;Dbxref=InterPro:IPR011701,PFAM:PF07690;Note=mfs_1~major facilitator superfamily mfs-1;gbkey=misc_feature;gene=hsrA;locus_tag=GGE_0152 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124183 124840 . + . ID=id-AFQR01000004.1:124183..124840;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124189 125353 . + . ID=id-AFQR01000004.1:124189..125353;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124192 124579 . + . ID=id-AFQR01000004.1:124192..124579;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124207 124822 . + . ID=id-AFQR01000004.1:124207..124822;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124207 124741 . + . ID=id-AFQR01000004.1:124207..124741;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124213 125338 . + . ID=id-AFQR01000004.1:124213..125338;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124213 125134 . + . ID=id-AFQR01000004.1:124213..125134;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124216 124465 . + . ID=id-AFQR01000004.1:124216..124465;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 125428 . + . ID=id-AFQR01000004.1:124222..125428;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 125332 . + . ID=id-AFQR01000004.1:124222..125332;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 125206 . + . ID=id-AFQR01000004.1:124222..125206;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 125047 . + . ID=id-AFQR01000004.1:124222..125047;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124936 . + . ID=id-AFQR01000004.1:124222..124936;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124639 . + . ID=id-AFQR01000004.1:124222..124639;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124561 . + . ID=id-AFQR01000004.1:124222..124561;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124456 . + . ID=id-AFQR01000004.1:124222..124456;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124378 . + . ID=id-AFQR01000004.1:124222..124378;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124222 124291 . + . ID=id-AFQR01000004.1:124222..124291;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124228 124555 . + . ID=id-AFQR01000004.1:124228..124555;Dbxref=InterPro:IPR001411;Note=FPrintScan:PR01036~tcrtetb~tetracycline resistance protein%2C tetb;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124603 124903 . + . ID=id-AFQR01000004.1:124603..124903;Note=specific~superfamily%3B label: MFS;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 124750 124915 . + . ID=id-AFQR01000004.1:124750..124915;Note=Gene3D:1.20.1250.20;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 125538 126053 . - . ID=gene-GGE_0153;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank CDS 125538 126053 . - 0 ID=cds-EGT83276.1;Parent=gene-GGE_0153;Dbxref=GeneID:1170987,InterPro:IPR004435,PFAM:PF03205,TIGRFAM:TIGR00176,NCBI_GP:EGT83276.1;Name=EGT83276.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||;locus_tag=GGE_0153;product=Molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=EGT83276.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 125553 126021 . - . ID=id-GGE_0153;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=mobB;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 125553 126018 . - . ID=id-GGE_0153-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=mobB;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 125553 126009 . - . ID=id-GGE_0153-3;Note=specific~superfamily%3B label: MobB;gbkey=misc_feature;gene=mobB;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 125559 126009 . - . ID=id-GGE_0153-4;Dbxref=InterPro:IPR004435,TIGRFAM:TIGR00176;Note=mobb: molybdopterin-guanine dinucleotide bio~molybdopterin-guanine dinucleotide biosynthesis protein b (mobb)%2C conserved domain;gbkey=misc_feature;gene=mobB;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 125562 125892 . - . ID=id-GGE_0153-5;Dbxref=PFAM:PF03205;Note=mobb;gbkey=misc_feature;gene=mobB;locus_tag=GGE_0153 GCA_000222085.2|AFQR01000004.1 Genbank gene 126540 126974 . - . ID=gene-GGE_0154;Name=GGE_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0154 GCA_000222085.2|AFQR01000004.1 Genbank CDS 126540 126974 . - 0 ID=cds-EGT83277.1;Parent=gene-GGE_0154;Dbxref=GeneID:1175314,InterPro:IPR007359,PFAM:PF04246,NCBI_GP:EGT83277.1;Name=EGT83277.1;Note=HI_0850;gbkey=CDS;locus_tag=GGE_0154;product=putative positive regulator of sigmaE%2C RseC/MucC;protein_id=EGT83277.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126540 126972 . - . ID=id-GGE_0154;Note=superfamily%3B label: RseC_MucC superfamily;gbkey=misc_feature;locus_tag=GGE_0154 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126564 126948 . - . ID=id-GGE_0154-2;Dbxref=InterPro:IPR007359,PFAM:PF04246;Note=rsec_mucc~positive regulator of sigma(e)%2C rsec/mucc;gbkey=misc_feature;locus_tag=GGE_0154 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126576 126780 . + . ID=id-AFQR01000004.1:126576..126780;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126594 126855 . + . ID=id-AFQR01000004.1:126594..126855;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126600 126768 . + . ID=id-AFQR01000004.1:126600..126768;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126622 126631 . + . ID=id-AFQR01000004.1:126622..126631;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 126968 127741 . - . ID=gene-GGE_0155;Name=GGE_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank CDS 126968 127741 . - 0 ID=cds-EGT83278.1;Parent=gene-GGE_0155;Dbxref=GeneID:167016802,InterPro:IPR007536,PFAM:PF04445,NCBI_GP:EGT83278.1;Name=EGT83278.1;Note=CGSHiEE_07805;gbkey=CDS;locus_tag=GGE_0155;product=UPF0341 protein;protein_id=EGT83278.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126986 127712 . - . ID=id-GGE_0155;Dbxref=InterPro:IPR007536;Note=HAMAP:MF_01523~upf0341~protein of unknown function duf548;gbkey=misc_feature;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 126992 127133 . - . ID=id-GGE_0155-2;Note=Gene3D:3.40.1630.10;gbkey=misc_feature;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127028 127673 . - . ID=id-GGE_0155-3;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127031 127667 . - . ID=id-GGE_0155-4;Dbxref=InterPro:IPR007536,PFAM:PF04445;Note=duf548~protein of unknown function duf548;gbkey=misc_feature;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127157 127541 . - . ID=id-GGE_0155-5;Note=Gene3D:3.40.50.150;gbkey=misc_feature;locus_tag=GGE_0155 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127025 127565 . + . ID=id-AFQR01000004.1:127025..127565;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 127723 128814 . - . ID=gene-GGE_0156;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank CDS 127723 128814 . - 0 ID=cds-EGT83279.1;Parent=gene-GGE_0156;Dbxref=GeneID:1174775,InterPro:IPR010280,InterPro:IPR011869,PFAM:PF05958,TIGRFAM:TIGR02143,NCBI_GP:EGT83279.1;Name=EGT83279.1;Ontology_term=GO:0006396,GO:0008033,GO:0008173,GO:0009021;gbkey=CDS;gene=trmA;go_function=RNA methyltransferase activity|0008173||,tRNA (uracil-5-)-methyltransferase activity|0009021||;go_process=RNA processing|0006396||,tRNA processing|0008033||;locus_tag=GGE_0156;product=tRNA uracil-5--methyltransferase;protein_id=EGT83279.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127723 128812 . - . ID=id-GGE_0156;Dbxref=InterPro:IPR011869;Note=multi-dom~HAMAP:MF_01011~trna_methyltr_trma~trna (uracil-5-)-methyltransferase%3B label: PRK05031;gbkey=misc_feature;gene=trmA;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127729 128809 . - . ID=id-GGE_0156-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=trmA;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127744 128794 . - . ID=id-GGE_0156-3;Dbxref=InterPro:IPR010280,InterPro:IPR011869,PFAM:PF05958,TIGRFAM:TIGR02143;Note=trna_u5-meth_tr~(uracil-5)-methyltransferase~trma_only: trna (uracil-5-)-methyltransfera~trna (uracil-5-)-methyltransferase;gbkey=misc_feature;gene=trmA;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127825 128713 . - . ID=id-GGE_0156-4;Note=HMMPanther:PTHR11061~family not named;gbkey=misc_feature;gene=trmA;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 128200 128326 . - . ID=id-GGE_0156-5;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=trmA;locus_tag=GGE_0156 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127756 128758 . + . ID=id-AFQR01000004.1:127756..128758;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01231~trma_2~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127789 128089 . + . ID=id-AFQR01000004.1:127789..128089;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 127813 128611 . + . ID=id-AFQR01000004.1:127813..128611;Dbxref=InterPro:IPR010280;Note=PatternScan:PS01230~trma_1~(uracil-5)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 128260 128275 . + . ID=id-AFQR01000004.1:128260..128275;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 128747 128756 . + . ID=id-AFQR01000004.1:128747..128756;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 128958 129293 . - . ID=gene-GGE_0157;Name=GGE_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0157 GCA_000222085.2|AFQR01000004.1 Genbank CDS 128958 129293 . - 0 ID=cds-EGT83280.1;Parent=gene-GGE_0157;Dbxref=GeneID:1176315,InterPro:IPR001463,InterPro:IPR007335,PFAM:PF01235,PFAM:PF04219,TIGRFAM:TIGR00835,NCBI_GP:EGT83280.1;Name=EGT83280.1;Note=HI_0847;Ontology_term=GO:0006814,GO:0016020,GO:0005283;gbkey=CDS;go_component=membrane|0016020||;go_function=sodium:amino acid symporter activity|0005283||;go_process=sodium ion transport|0006814||;locus_tag=GGE_0157;product=UPF0438 protein;protein_id=EGT83280.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 128958 129291 . - . ID=id-GGE_0157;Note=superfamily%3B label: DUF413 superfamily;gbkey=misc_feature;locus_tag=GGE_0157 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 128988 129228 . - . ID=id-GGE_0157-2;Dbxref=InterPro:IPR007335,PFAM:PF04219;Note=duf413~protein of unknown function duf413;gbkey=misc_feature;locus_tag=GGE_0157 GCA_000222085.2|AFQR01000004.1 Genbank gene 129355 129972 . - . ID=gene-GGE_0158;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank CDS 129355 129972 . - 0 ID=cds-EGT83281.1;Parent=gene-GGE_0158;Dbxref=GeneID:400828,InterPro:IPR001853,InterPro:IPR002698,InterPro:IPR003439,InterPro:IPR010509,InterPro:IPR011527,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017871,InterPro:IPR017936,InterPro:IPR017937,InterPro:IPR017940,PFAM:PF00005,PFAM:PF01323,PFAM:PF01812,PFAM:PF06472,PIR:PIRSF006806,TIGRFAM:TIGR02727,NCBI_GP:EGT83281.1;Name=EGT83281.1;Ontology_term=GO:0045454,GO:0009396,GO:0055085,GO:0006810,GO:0016021,GO:0016020,GO:0030288,GO:0030272,GO:0005524,GO:0042626,GO:0016887,GO:0015035;gbkey=CDS;gene=dsbA;go_component=integral to membrane|0016021||,membrane|0016020||,outer membrane-bounded periplasmic space|0030288||;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||,ATP binding|0005524||,ATPase activity coupled to transmembrane movement of substances|0042626||,ATPase activity|0016887||,protein disulfide oxidoreductase activity|0015035||;go_process=cell redox homeostasis|0045454||,folic acid-containing compound biosynthetic process|0009396||,transmembrane transport|0055085||,transport|0006810||;locus_tag=GGE_0158;product=Thiol:disulfide interchange protein DsbA;protein_id=EGT83281.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129391 129925 . - . ID=id-GGE_0158;Dbxref=InterPro:IPR017936;Note=ProfileScan:PS51352~thioredoxin_2~thioredoxin-like;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129424 129904 . - . ID=id-GGE_0158-2;Dbxref=InterPro:IPR012336;Note=superfamily:SSF52833~thioredoxin-like~thioredoxin-like fold;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129427 129901 . - . ID=id-GGE_0158-3;Dbxref=InterPro:IPR012335;Note=Gene3D:3.40.30.10~thioredoxin fold;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129484 129829 . - . ID=id-GGE_0158-4;Note=specific~superfamily%3B label: DsbA_DsbA;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129484 129766 . - . ID=id-GGE_0158-5;Note=multi-dom%3B label: DSBA;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129487 129769 . - . ID=id-GGE_0158-6;Dbxref=InterPro:IPR001853,PFAM:PF01323;Note=dsba~dsba-like thioredoxin domain;gbkey=misc_feature;gene=dsbA;locus_tag=GGE_0158 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129391 129445 . + . ID=id-AFQR01000004.1:129391..129445;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129412 129487 . + . ID=id-AFQR01000004.1:129412..129487;Dbxref=InterPro:IPR017937;Note=PatternScan:PS00194~thioredoxin_1~thioredoxin%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 129985 130251 . - . ID=gene-GGE_0159;Name=GGE_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0159 GCA_000222085.2|AFQR01000004.1 Genbank CDS 129985 130251 . - 0 ID=cds-EGT83282.1;Parent=gene-GGE_0159;Dbxref=GeneID:1176323,InterPro:IPR009383,PFAM:PF06288,NCBI_GP:EGT83282.1;Name=EGT83282.1;Note=HI_0845;gbkey=CDS;locus_tag=GGE_0159;product=hypothetical protein;protein_id=EGT83282.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129985 130246 . - . ID=id-GGE_0159;Dbxref=InterPro:IPR009383;Note=BlastProDom:PD029038~y845_haein_p44900~protein of unknown function duf1040;gbkey=misc_feature;locus_tag=GGE_0159 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 129985 130243 . - . ID=id-GGE_0159-2;Dbxref=InterPro:IPR009383,PFAM:PF06288;Note=superfamily~duf1040~protein of unknown function duf1040%3B label: DUF1040 superfamily;gbkey=misc_feature;locus_tag=GGE_0159 GCA_000222085.2|AFQR01000004.1 Genbank gene 130316 130906 . + . ID=gene-GGE_0160;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank CDS 130316 130906 . + 0 ID=cds-EGT83283.1;Parent=gene-GGE_0160;Dbxref=GeneID:1170985,InterPro:IPR005130,InterPro:IPR013482,InterPro:IPR021144,PFAM:PF03313,TIGRFAM:TIGR02665,NCBI_GP:EGT83283.1;Name=EGT83283.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||;locus_tag=GGE_0160;product=Putative molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=EGT83283.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130316 130889 . + . ID=id-GGE_0160;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130322 130880 . + . ID=id-GGE_0160-2;Note=multi-dom%3B label: mobA;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130325 130880 . + . ID=id-GGE_0160-3;Dbxref=InterPro:IPR013482;Note=HAMAP:MF_00316~moba~molybdopterin-guanine dinucleotide biosynthesis protein a;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130328 130880 . + . ID=id-GGE_0160-4;Note=Gene3D:3.90.550.10;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130331 130868 . + . ID=id-GGE_0160-5;Dbxref=InterPro:IPR013482,TIGRFAM:TIGR02665;Note=molyb_moba: molybdopterin-guanine dinucleo~molybdopterin-guanine dinucleotide biosynthesis protein a;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130331 130865 . + . ID=id-GGE_0160-6;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type superfamily;gbkey=misc_feature;gene=mobA;locus_tag=GGE_0160 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130667 130676 . - . ID=id-AFQR01000004.1:130667..130676;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130908 130917 . + . ID=id-AFQR01000004.1:130908..130917;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 130928 131788 . - . ID=gene-GGE_0161;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank CDS 130928 131788 . - 0 ID=cds-EGT83284.1;Parent=gene-GGE_0161;Dbxref=GeneID:1169355,InterPro:IPR002052,InterPro:IPR012327,InterPro:IPR023095,PFAM:PF02086,TIGRFAM:TIGR00571,NCBI_GP:EGT83284.1;Name=EGT83284.1;Ontology_term=GO:0006306,GO:0032259,GO:0008168,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=methyltransferase activity|0008168||,nucleic acid binding|0003676||,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||;go_process=DNA methylation|0006306||,methylation|0032259||;locus_tag=GGE_0161;product=DNA adenine methylase;protein_id=EGT83284.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130970 131744 . - . ID=id-GGE_0161;Note=superfamily~superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase%3B label: MethyltransfD12 superfamily;gbkey=misc_feature;gene=dam;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130973 131732 . - . ID=id-GGE_0161-2;Dbxref=InterPro:IPR012327,TIGRFAM:TIGR00571;Note=dam: dna adenine methylase~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;gene=dam;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130991 131663 . - . ID=id-GGE_0161-3;Dbxref=InterPro:IPR012327,PFAM:PF02086;Note=methyltransfd12~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature;gene=dam;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131144 131216 . - . ID=id-GGE_0161-4;Dbxref=InterPro:IPR023095;Note=Gene3D:1.10.1020.10~adenine-specific methyltransferase%2C domain 2;gbkey=misc_feature;gene=dam;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131273 131282 . - . ID=id-GGE_0161-5;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=dam;locus_tag=GGE_0161 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130949 131501 . + . ID=id-AFQR01000004.1:130949..131501;Dbxref=InterPro:IPR002052;Note=PatternScan:PS00092~n6_mtase~dna methylase%2C n-6 adenine-specific%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130967 131492 . + . ID=id-AFQR01000004.1:130967..131492;Dbxref=InterPro:IPR012327;Note=FPrintScan:PR00505~d12n6mtfrase~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130970 131114 . + . ID=id-AFQR01000004.1:130970..131114;Dbxref=InterPro:IPR012327;Note=FPrintScan:PR00505~d12n6mtfrase~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130973 131057 . + . ID=id-AFQR01000004.1:130973..131057;Dbxref=InterPro:IPR012327;Note=FPrintScan:PR00505~d12n6mtfrase~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 130979 130991 . + . ID=id-AFQR01000004.1:130979..130991;Dbxref=InterPro:IPR012327;Note=FPrintScan:PR00505~d12n6mtfrase~d12 class n6 adenine-specific dna methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131252 131450 . + . ID=id-AFQR01000004.1:131252..131450;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 131790 132878 . - . ID=gene-GGE_0162;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank CDS 131790 132878 . - 0 ID=cds-EGT83285.1;Parent=gene-GGE_0162;Dbxref=GeneID:1168503,InterPro:IPR016037,PFAM:PF01761,PIR:PIRSF001455,TIGRFAM:TIGR01357,NCBI_GP:EGT83285.1;Name=EGT83285.1;Ontology_term=GO:0009073,GO:0005737,GO:0003856;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||;go_function=3-dehydroquinate synthase activity|0003856||;go_process=aromatic amino acid family biosynthetic process|0009073||;locus_tag=GGE_0162;product=3-dehydroquinate synthase;protein_id=EGT83285.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131790 132831 . - . ID=id-GGE_0162;Dbxref=InterPro:IPR016037;Note=HMMPanther:PTHR21090:SF1~3-dehydroquinate synthase~3-dehydroquinate synthase arob~HMMPanther:PTHR21090~family not named;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131796 132867 . - . ID=id-GGE_0162-2;Dbxref=InterPro:IPR016037,PIR:PIRSF001455;Note=3-dehydroquinate synthase~3-dehydroquinate synthase arob;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131796 132858 . - . ID=id-GGE_0162-3;Dbxref=InterPro:IPR016037;Note=HAMAP:MF_00110~dhq_synthase~3-dehydroquinate synthase arob~superfamily:SSF56796~dehydroquinate synthase-like;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131802 132294 . - . ID=id-GGE_0162-4;Note=Gene3D:3.40.50.1970;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131829 132822 . - . ID=id-GGE_0162-5;Dbxref=InterPro:IPR016037,TIGRFAM:TIGR01357;Note=arob: 3-dehydroquinate synthase~3-dehydroquinate synthase arob;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131829 132819 . - . ID=id-GGE_0162-6;Note=specific~superfamily%3B label: DHQS;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131835 132687 . - . ID=id-GGE_0162-7;Note=multi-dom%3B label: Fe-ADH;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 131841 132714 . - . ID=id-GGE_0162-8;Dbxref=PFAM:PF01761;Note=dhq_synthase;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132306 132345 . - . ID=id-GGE_0162-9;Note=Gene3D:1.20.1090.10;gbkey=misc_feature;gene=aroB;locus_tag=GGE_0162 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132616 132625 . + . ID=id-AFQR01000004.1:132616..132625;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 132898 133440 . - . ID=gene-GGE_0163;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank CDS 132898 133440 . - 0 ID=cds-EGT83286.1;Parent=gene-GGE_0163;Dbxref=GeneID:81336774,InterPro:IPR000623,InterPro:IPR023000,PFAM:PF01202,NCBI_GP:EGT83286.1;Name=EGT83286.1;Ontology_term=GO:0005524,GO:0004765;gbkey=CDS;gene=aroK;go_function=ATP binding|0005524||,shikimate kinase activity|0004765||;locus_tag=GGE_0163;product=Shikimate kinase;protein_id=EGT83286.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132898 133414 . - . ID=id-GGE_0163;Note=multi-dom%3B label: aroK;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132898 133408 . - . ID=id-GGE_0163-2;Note=HMMPanther:PTHR21087~family not named;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132907 133405 . - . ID=id-GGE_0163-3;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132910 133405 . - . ID=id-GGE_0163-4;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132910 133402 . - . ID=id-GGE_0163-5;Dbxref=InterPro:IPR000623;Note=HAMAP:MF_00109~shikimate_kinase~shikimate kinase;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132916 133363 . - . ID=id-GGE_0163-6;Note=specific~superfamily%3B label: P-loop NTPase superfamily;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132919 132946 . - . ID=id-GGE_0163-7;Dbxref=InterPro:IPR000623;Note=FPrintScan:PR01100~shikimtknase~shikimate kinase;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132937 133372 . - . ID=id-GGE_0163-8;Dbxref=InterPro:IPR000623,PFAM:PF01202;Note=ski~shikimate kinase;gbkey=misc_feature;gene=aroK;locus_tag=GGE_0163 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132925 133075 . + . ID=id-AFQR01000004.1:132925..133075;Dbxref=InterPro:IPR000623;Note=FPrintScan:PR01100~shikimtknase~shikimate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132928 133129 . + . ID=id-AFQR01000004.1:132928..133129;Dbxref=InterPro:IPR000623;Note=FPrintScan:PR01100~shikimtknase~shikimate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132934 133060 . + . ID=id-AFQR01000004.1:132934..133060;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132940 132991 . + . ID=id-AFQR01000004.1:132940..132991;Dbxref=InterPro:IPR000623;Note=FPrintScan:PR01100~shikimtknase~shikimate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132952 133192 . + . ID=id-AFQR01000004.1:132952..133192;Dbxref=InterPro:IPR000623;Note=FPrintScan:PR01100~shikimtknase~shikimate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 132976 133078 . + . ID=id-AFQR01000004.1:132976..133078;Dbxref=InterPro:IPR023000;Note=PatternScan:PS01128~shikimate_kinase~shikimate kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 133727 135538 . - . ID=gene-GGE_0164;Name=GGE_0164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank CDS 133727 135538 . - 0 ID=cds-EGT83287.1;Parent=gene-GGE_0164;Dbxref=GeneID:1168224,InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR006420,InterPro:IPR008334,PFAM:PF00149,PFAM:PF02872,TIGRFAM:TIGR01530,NCBI_GP:EGT83287.1;Name=EGT83287.1;Note=HI_0206;Ontology_term=GO:0009166,GO:0008253,GO:0016788,GO:0016787,GO:0046872,GO:0000166;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||,hydrolase activity acting on ester bonds|0016788||,hydrolase activity|0016787||,metal ion binding|0046872||,nucleotide binding|0000166||;go_process=nucleotide catabolic process|0009166||;locus_tag=GGE_0164;product=putative nucleotidase-like protein;protein_id=EGT83287.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133760 135350 . - . ID=id-GGE_0164;Dbxref=InterPro:IPR006179;Note=HMMPanther:PTHR11575:SF7~5-nucleotidase-related~HMMPanther:PTHR11575~family not named~5'-nucleotidase/apyrase;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133814 134783 . - . ID=id-GGE_0164-2;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133820 134672 . - . ID=id-GGE_0164-3;Note=Gene3D:3.60.21.10;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133838 135362 . - . ID=id-GGE_0164-4;Dbxref=InterPro:IPR006420,TIGRFAM:TIGR01530;Note=multi-dom~nadn: nad nucleotidase~nad pyrophosphatase/5-nucleotidase nadn%3B label: nadN;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133838 134573 . - . ID=id-GGE_0164-5;Note=specific~superfamily%3B label: MPP_CD73_N;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133841 134375 . - . ID=id-GGE_0164-6;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=metallophos~metallo-dependent phosphatase;gbkey=misc_feature;locus_tag=GGE_0164 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133763 134084 . + . ID=id-AFQR01000004.1:133763..134084;Dbxref=InterPro:IPR006146;Note=PatternScan:PS00786~5_nucleotidase_2~5'-nucleotidase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133766 133838 . + . ID=id-AFQR01000004.1:133766..133838;Dbxref=InterPro:IPR006146;Note=PatternScan:PS00785~5_nucleotidase_1~5'-nucleotidase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133781 134378 . + . ID=id-AFQR01000004.1:133781..134378;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133784 133832 . + . ID=id-AFQR01000004.1:133784..133832;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133787 135305 . + . ID=id-AFQR01000004.1:133787..135305;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133790 134576 . + . ID=id-AFQR01000004.1:133790..134576;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133799 135059 . + . ID=id-AFQR01000004.1:133799..135059;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 133799 134435 . + . ID=id-AFQR01000004.1:133799..134435;Dbxref=InterPro:IPR006179;Note=FPrintScan:PR01607~apyrasefamly~5'-nucleotidase/apyrase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 134153 134963 . + . ID=id-AFQR01000004.1:134153..134963;Note=superfamily%3B label: 5_nucleotid_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 134153 134960 . + . ID=id-AFQR01000004.1:134153..134960;Dbxref=InterPro:IPR008334,PFAM:PF02872;Note=5_nucleotid_c~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 134282 134954 . + . ID=id-AFQR01000004.1:134282..134954;Dbxref=InterPro:IPR008334;Note=Gene3D:3.90.780.10~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 134366 134882 . + . ID=id-AFQR01000004.1:134366..134882;Dbxref=InterPro:IPR008334;Note=superfamily:SSF55816~5'-nucleotidase (syn. udp-sugar hydrolase) domain~5'-nucleotidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 135563 136354 . - . ID=gene-GGE_0165;Name=GGE_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0165 GCA_000222085.2|AFQR01000004.1 Genbank CDS 135563 136354 . - 0 ID=cds-EGT83288.1;Parent=gene-GGE_0165;Dbxref=InterPro:IPR007227,PFAM:PF04093,TIGRFAM:TIGR03426,NCBI_GP:EGT83288.1;Name=EGT83288.1;Note=HI_0205;Ontology_term=GO:0008360,GO:0016021;gbkey=CDS;go_component=integral to membrane|0016021||;go_process=regulation of cell shape|0008360||;locus_tag=GGE_0165;product=putative lipoprotein;protein_id=EGT83288.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 135563 135620 . - . ID=id-GGE_0165;Note=ProfileScan:PS51257~prokar_lipoprotein;gbkey=misc_feature;locus_tag=GGE_0165 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 135629 135635 . - . ID=id-GGE_0165-2;Note=seg;gbkey=misc_feature;locus_tag=GGE_0165 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136137 136146 . + . ID=id-AFQR01000004.1:136137..136146;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 136653 136901 . + . ID=gene-GGE_0166;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank CDS 136653 136901 . + 0 ID=cds-EGT83289.1;Parent=gene-GGE_0166;Dbxref=GeneID:1173210,InterPro:IPR000307,InterPro:IPR020592,PFAM:PF00886,TIGRFAM:TIGR00002,NCBI_GP:EGT83289.1;Name=EGT83289.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsP;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0166;product=30S ribosomal protein S16;protein_id=EGT83289.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136653 136890 . + . ID=id-GGE_0166;Dbxref=InterPro:IPR000307;Note=Gene3D:3.30.1320.10~ribosomal protein s16~superfamily:SSF54565~ribosomal protein s16~ribosomal protein s16;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136653 136887 . + . ID=id-GGE_0166-2;Dbxref=InterPro:IPR000307;Note=HAMAP:MF_00385~ribosomal_s16~ribosomal protein s16~HMMPanther:PTHR12919:SF12~subfamily not named~HMMPanther:PTHR12919~family not named~ribosomal protein s16;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136653 136878 . + . ID=id-GGE_0166-3;Note=superfamily%3B label: Ribosomal_S16 superfamily;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136659 136893 . + . ID=id-GGE_0166-4;Dbxref=InterPro:IPR000307,TIGRFAM:TIGR00002;Note=s16: ribosomal protein s16~ribosomal protein s16;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136659 136683 . + . ID=id-GGE_0166-5;Dbxref=InterPro:IPR020592;Note=PatternScan:PS00732~ribosomal_s16~ribosomal protein s16%2C conserved site;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136677 136836 . + . ID=id-GGE_0166-6;Dbxref=InterPro:IPR000307,PFAM:PF00886;Note=ribosomal_s16~ribosomal protein s16;gbkey=misc_feature;gene=rpsP;locus_tag=GGE_0166 GCA_000222085.2|AFQR01000004.1 Genbank gene 136946 137473 . + . ID=gene-GGE_0167;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank CDS 136946 137473 . + 0 ID=cds-EGT83290.1;Parent=gene-GGE_0167;Dbxref=GeneID:1176008,InterPro:IPR002676,InterPro:IPR007903,InterPro:IPR009000,InterPro:IPR011033,InterPro:IPR011961,PFAM:PF01782,PFAM:PF05239,TIGRFAM:TIGR02273,NCBI_GP:EGT83290.1;Name=EGT83290.1;Ontology_term=GO:0006364,GO:0005840,GO:0043022;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||;go_function=ribosome binding|0043022||;go_process=rRNA processing|0006364||;locus_tag=GGE_0167;product=Ribosome maturation factor rimM;protein_id=EGT83290.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136955 137219 . + . ID=id-GGE_0167;Dbxref=InterPro:IPR002676;Note=Gene3D:2.40.30.60~rimm protein;gbkey=misc_feature;gene=rimM;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136961 137213 . + . ID=id-GGE_0167-2;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature;gene=rimM;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136964 137456 . + . ID=id-GGE_0167-3;Dbxref=InterPro:IPR011961;Note=HAMAP:MF_00014~ribosome_mat_rimm~16s rrna processing protein rimm;gbkey=misc_feature;gene=rimM;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136970 137450 . + . ID=id-GGE_0167-4;Dbxref=InterPro:IPR011961,TIGRFAM:TIGR02273;Note=multi-dom~16s_rimm: 16s rrna processing protein rimm~16s rrna processing protein rimm%3B label: rimM;gbkey=misc_feature;gene=rimM;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136970 137186 . + . ID=id-GGE_0167-5;Dbxref=InterPro:IPR002676,PFAM:PF01782;Note=superfamily~rimm~rimm protein%3B label: RimM superfamily;gbkey=misc_feature;gene=rimM;locus_tag=GGE_0167 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 136991 137285 . - . ID=id-AFQR01000004.1:136991..137285;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137177 137243 . - . ID=id-AFQR01000004.1:137177..137243;Dbxref=InterPro:IPR011033;Note=Gene3D:2.30.30.240~superfamily:SSF50346~prc-barrel domain~prc-barrel-like;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137180 137237 . - . ID=id-AFQR01000004.1:137180..137237;Dbxref=InterPro:IPR007903,PFAM:PF05239;Note=prc~prc-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137186 137234 . - . ID=id-AFQR01000004.1:137186..137234;Note=superfamily%3B label: PRCH superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 137511 138251 . + . ID=gene-GGE_0168;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank CDS 137511 138251 . + 0 ID=cds-EGT83291.1;Parent=gene-GGE_0168;Dbxref=GeneID:1174776,InterPro:IPR002649,InterPro:IPR016009,InterPro:IPR023148,PFAM:PF01746,PIR:PIRSF000386,TIGRFAM:TIGR00088,NCBI_GP:EGT83291.1;Name=EGT83291.1;Ontology_term=GO:0008033,GO:0003723,GO:0009019;gbkey=CDS;gene=trmD;go_function=RNA binding|0003723||,tRNA (guanine-N1-)-methyltransferase activity|0009019||;go_process=tRNA processing|0008033||;locus_tag=GGE_0168;product=tRNA guanine-N1--methyltransferase;protein_id=EGT83291.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137511 138249 . + . ID=id-GGE_0168;Dbxref=InterPro:IPR002649,PIR:PIRSF000386;Note=HAMAP:MF_00605~trmd~trna (guanine-n1-)-methyltransferase%2C bacteria~trna-(m1g37) methyltransferase~trna (guanine-n1-)-methyltransferase%2C bacteria;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137511 138246 . + . ID=id-GGE_0168-2;Note=superfamily:SSF75217~alpha/beta knot;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137511 138243 . + . ID=id-GGE_0168-3;Note=superfamily%3B label: tRNA_m1G_MT superfamily;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137511 138231 . + . ID=id-GGE_0168-4;Dbxref=InterPro:IPR002649,TIGRFAM:TIGR00088;Note=trmd: trna (guanine-n1)-methyltransferase~trna (guanine-n1-)-methyltransferase%2C bacteria;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137511 137991 . + . ID=id-GGE_0168-5;Note=Gene3D:3.40.1280.10;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137517 138219 . + . ID=id-GGE_0168-6;Note=HMMPanther:PTHR10056~trna (guanine-n(1)-)-methyltransferase;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137580 138108 . + . ID=id-GGE_0168-7;Dbxref=InterPro:IPR016009,PFAM:PF01746;Note=trna_m1g_mt~trna (guanine-n1-)-methyltransferase;gbkey=misc_feature;gene=trmD;locus_tag=GGE_0168 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137544 137730 . - . ID=id-AFQR01000004.1:137544..137730;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 137739 138021 . - . ID=id-AFQR01000004.1:137739..138021;Dbxref=InterPro:IPR023148;Note=Gene3D:1.10.1270.20~trna (guanine-n1-)-methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 138288 138638 . + . ID=gene-GGE_0169;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank CDS 138288 138638 . + 0 ID=cds-EGT83292.1;Parent=gene-GGE_0169;Dbxref=GeneID:1172981,InterPro:IPR001857,InterPro:IPR008991,InterPro:IPR018257,PFAM:PF01245,TIGRFAM:TIGR01024,NCBI_GP:EGT83292.1;Name=EGT83292.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplS;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0169;product=50S ribosomal protein L19;protein_id=EGT83292.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138288 138630 . + . ID=id-GGE_0169;Dbxref=InterPro:IPR001857;Note=HMMPanther:PTHR15680:SF8~subfamily not named~HMMPanther:PTHR15680~family not named~ribosomal protein l19;gbkey=misc_feature;gene=rplS;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138294 138630 . + . ID=id-GGE_0169-2;Dbxref=InterPro:IPR008991;Note=superfamily~superfamily:SSF50104~translation proteins sh3-like domain~translation protein sh3-like%3B label: Ribosomal_L19 superfamily;gbkey=misc_feature;gene=rplS;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138294 138627 . + . ID=id-GGE_0169-3;Dbxref=InterPro:IPR001857,TIGRFAM:TIGR01024;Note=HAMAP:MF_00402~ribosomal_l19~ribosomal protein l19~rpls_bact: ribosomal protein l19~ribosomal protein l19;gbkey=misc_feature;gene=rplS;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138297 138621 . + . ID=id-GGE_0169-4;Dbxref=InterPro:IPR001857,PFAM:PF01245;Note=ribosomal_l19~ribosomal protein l19;gbkey=misc_feature;gene=rplS;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138300 138378 . + . ID=id-GGE_0169-5;Dbxref=InterPro:IPR001857;Note=FPrintScan:PR00061~ribosomall19~ribosomal protein l19;gbkey=misc_feature;gene=rplS;locus_tag=GGE_0169 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138324 138543 . - . ID=id-AFQR01000004.1:138324..138543;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138336 138546 . - . ID=id-AFQR01000004.1:138336..138546;Dbxref=InterPro:IPR018257;Note=PatternScan:PS01015~ribosomal_l19~ribosomal protein l19%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138366 138552 . - . ID=id-AFQR01000004.1:138366..138552;Dbxref=InterPro:IPR001857;Note=FPrintScan:PR00061~ribosomall19~ribosomal protein l19;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138378 138390 . - . ID=id-AFQR01000004.1:138378..138390;Dbxref=InterPro:IPR001857;Note=FPrintScan:PR00061~ribosomall19~ribosomal protein l19;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 138689 139426 . - . ID=gene-GGE_0170;Name=GGE_0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0170 GCA_000222085.2|AFQR01000004.1 Genbank CDS 138689 139426 . - 0 ID=cds-EGT83293.1;Parent=gene-GGE_0170;Dbxref=GeneID:1175321,InterPro:IPR003828,PFAM:PF02677,NCBI_GP:EGT83293.1;Name=EGT83293.1;Note=HI_0882;gbkey=CDS;locus_tag=GGE_0170;product=hypothetical protein;protein_id=EGT83293.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138815 139301 . - . ID=id-GGE_0170;Note=superfamily%3B label: DUF208 superfamily;gbkey=misc_feature;locus_tag=GGE_0170 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 138830 139217 . - . ID=id-GGE_0170-2;Dbxref=InterPro:IPR003828,PFAM:PF02677;Note=duf208~protein of unknown function duf208;gbkey=misc_feature;locus_tag=GGE_0170 GCA_000222085.2|AFQR01000004.1 Genbank gene 139477 140466 . - . ID=gene-GGE_0171;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank CDS 139477 140466 . - 0 ID=cds-EGT83294.1;Parent=gene-GGE_0171;Dbxref=GeneID:1170590,InterPro:IPR000092,InterPro:IPR008949,InterPro:IPR017446,PFAM:PF00348,NCBI_GP:EGT83294.1;Name=EGT83294.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||;locus_tag=GGE_0171;product=Octaprenyl-diphosphate synthase;protein_id=EGT83294.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139498 140446 . - . ID=id-GGE_0171;Dbxref=InterPro:IPR017446;Note=HMMPanther:PTHR12001:SF42~subfamily not named~HMMPanther:PTHR12001~family not named~polyprenyl synthetase-related;gbkey=misc_feature;gene=ispB;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139501 140440 . - . ID=id-GGE_0171-2;Dbxref=InterPro:IPR008949;Note=Gene3D:1.10.600.10~terpenoid synthase;gbkey=misc_feature;gene=ispB;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139504 140440 . - . ID=id-GGE_0171-3;Dbxref=InterPro:IPR008949;Note=superfamily:SSF48576~terpenoid synthases~terpenoid synthase;gbkey=misc_feature;gene=ispB;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139576 140362 . - . ID=id-GGE_0171-4;Note=specific~superfamily%3B label: Isoprenoid_Biosyn_C1 superfamily;gbkey=misc_feature;gene=ispB;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139591 140236 . - . ID=id-GGE_0171-5;Dbxref=InterPro:IPR000092,PFAM:PF00348;Note=polyprenyl_synt~polyprenyl synthetase;gbkey=misc_feature;gene=ispB;locus_tag=GGE_0171 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139513 140026 . + . ID=id-AFQR01000004.1:139513..140026;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139516 140104 . + . ID=id-AFQR01000004.1:139516..140104;Dbxref=InterPro:IPR000092;Note=PatternScan:PS00444~polyprenyl_synthase_2~polyprenyl synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 139522 139738 . + . ID=id-AFQR01000004.1:139522..139738;Dbxref=InterPro:IPR000092;Note=PatternScan:PS00723~polyprenyl_synthase_1~polyprenyl synthetase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140487 140496 . + . ID=id-AFQR01000004.1:140487..140496;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 140680 140991 . + . ID=gene-GGE_0172;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=GGE_0172 GCA_000222085.2|AFQR01000004.1 Genbank CDS 140680 140991 . + 0 ID=cds-EGT83295.1;Parent=gene-GGE_0172;Dbxref=GeneID:166986878,InterPro:IPR001787,InterPro:IPR018258,PFAM:PF00829,TIGRFAM:TIGR00061,NCBI_GP:EGT83295.1;Name=EGT83295.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003723,GO:0003735;gbkey=CDS;gene=rplU;go_component=intracellular|0005622||,ribosome|0005840||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0172;product=50S ribosomal protein L21;protein_id=EGT83295.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140680 140989 . + . ID=id-GGE_0172;Dbxref=InterPro:IPR001787;Note=superfamily~HAMAP:MF_01363~ribosomal_l21~ribosomal protein l21~superfamily:SSF141091~l21p-like~HMMPanther:PTHR21349~family not named~ribosomal protein l21%3B label: Ribosomal_L21p superfamily;gbkey=misc_feature;gene=rplU;locus_tag=GGE_0172 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140680 140968 . + . ID=id-GGE_0172-2;Dbxref=InterPro:IPR001787,PFAM:PF00829;Note=ribosomal_l21p~ribosomal protein l21;gbkey=misc_feature;gene=rplU;locus_tag=GGE_0172 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140686 140983 . + . ID=id-GGE_0172-3;Dbxref=InterPro:IPR001787,TIGRFAM:TIGR00061;Note=l21: ribosomal protein l21~ribosomal protein l21;gbkey=misc_feature;gene=rplU;locus_tag=GGE_0172 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140737 140821 . - . ID=id-AFQR01000004.1:140737..140821;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 140749 140896 . - . ID=id-AFQR01000004.1:140749..140896;Dbxref=InterPro:IPR018258;Note=PatternScan:PS01169~ribosomal_l21~ribosomal protein l21%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 141012 141269 . + . ID=gene-GGE_0173;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank CDS 141012 141269 . + 0 ID=cds-EGT83296.1;Parent=gene-GGE_0173;Dbxref=InterPro:IPR001684,InterPro:IPR018261,PFAM:PF01016,TIGRFAM:TIGR00062,NCBI_GP:EGT83296.1;Name=EGT83296.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpmA;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0173;product=50S ribosomal protein L27;protein_id=EGT83296.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141012 141267 . + . ID=id-GGE_0173;Dbxref=InterPro:IPR001684;Note=HAMAP:MF_00539~ribosomal_l27~ribosomal protein l27;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141012 141261 . + . ID=id-GGE_0173-2;Dbxref=InterPro:IPR001684,TIGRFAM:TIGR00062;Note=superfamily~HMMPanther:PTHR15893~family not named~ribosomal protein l27~l27: ribosomal protein l27~ribosomal protein l27%3B label: Ribosomal_L27 superfamily;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141018 141258 . + . ID=id-GGE_0173-3;Dbxref=InterPro:IPR001684,PFAM:PF01016;Note=ribosomal_l27~ribosomal protein l27;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141024 141087 . + . ID=id-GGE_0173-4;Dbxref=InterPro:IPR001684;Note=FPrintScan:PR00063~ribosomall27~ribosomal protein l27;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141072 141207 . + . ID=id-GGE_0173-5;Dbxref=InterPro:IPR001684;Note=superfamily:SSF110324~ribosomal l27 protein~ribosomal protein l27;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141096 141144 . + . ID=id-GGE_0173-6;Dbxref=InterPro:IPR001684;Note=BlastProDom:PD003114~rl27_haedu_q7vp91~ribosomal protein l27;gbkey=misc_feature;gene=rpmA;locus_tag=GGE_0173 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141057 141114 . - . ID=id-AFQR01000004.1:141057..141114;Dbxref=InterPro:IPR018261;Note=PatternScan:PS00831~ribosomal_l27~ribosomal protein l27%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141087 141174 . - . ID=id-AFQR01000004.1:141087..141174;Dbxref=InterPro:IPR001684;Note=FPrintScan:PR00063~ribosomall27~ribosomal protein l27;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141087 141099 . - . ID=id-AFQR01000004.1:141087..141099;Dbxref=InterPro:IPR001684;Note=FPrintScan:PR00063~ribosomall27~ribosomal protein l27;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 141350 142270 . + . ID=gene-GGE_0174;Name=GGE_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank CDS 141350 142270 . + 0 ID=cds-EGT83297.1;Parent=gene-GGE_0174;Dbxref=GeneID:6136718,InterPro:IPR000620,PFAM:PF00892,NCBI_GP:EGT83297.1;Name=EGT83297.1;Note=HI_0878;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||;locus_tag=GGE_0174;product=putative multidrug resistance efflux transporter EmrE;protein_id=EGT83297.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141350 142247 . + . ID=id-GGE_0174;Note=multi-dom%3B label: RhaT;gbkey=misc_feature;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141365 141410 . + . ID=id-GGE_0174-2;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141401 141680 . + . ID=id-GGE_0174-3;Note=superfamily%3B label: EamA superfamily;gbkey=misc_feature;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141404 141719 . + . ID=id-GGE_0174-4;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=eama~drug/metabolite transporter;gbkey=misc_feature;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141473 141662 . + . ID=id-GGE_0174-5;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature;locus_tag=GGE_0174 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141392 141734 . - . ID=id-AFQR01000004.1:141392..141734;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141395 141488 . - . ID=id-AFQR01000004.1:141395..141488;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141404 141653 . - . ID=id-AFQR01000004.1:141404..141653;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141404 141467 . - . ID=id-AFQR01000004.1:141404..141467;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141410 142085 . - . ID=id-AFQR01000004.1:141410..142085;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141410 141911 . - . ID=id-AFQR01000004.1:141410..141911;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141410 141719 . - . ID=id-AFQR01000004.1:141410..141719;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141419 142187 . - . ID=id-AFQR01000004.1:141419..142187;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141419 141983 . - . ID=id-AFQR01000004.1:141419..141983;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141419 141806 . - . ID=id-AFQR01000004.1:141419..141806;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141419 141557 . - . ID=id-AFQR01000004.1:141419..141557;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141689 141923 . - . ID=id-AFQR01000004.1:141689..141923;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 141734 141848 . - . ID=id-AFQR01000004.1:141734..141848;Dbxref=InterPro:IPR000620,PFAM:PF00892;Note=superfamily~eama~drug/metabolite transporter%3B label: EamA superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142268 142277 . + . ID=id-AFQR01000004.1:142268..142277;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 142298 143470 . + . ID=gene-GGE_0175;Name=obg;gbkey=Gene;gene=obg;gene_biotype=protein_coding;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank CDS 142298 143470 . + 0 ID=cds-EGT83298.1;Parent=gene-GGE_0175;Dbxref=GeneID:81336109,InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR006074,InterPro:IPR006169,InterPro:IPR014100,PFAM:PF01018,PFAM:PF01926,PIR:PIRSF002401,TIGRFAM:TIGR00231,TIGRFAM:TIGR02729,NCBI_GP:EGT83298.1;Name=EGT83298.1;Ontology_term=GO:0005622,GO:0005525,GO:0003924,GO:0000287;gbkey=CDS;gene=obg;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,GTPase activity|0003924||,magnesium ion binding|0000287||;locus_tag=GGE_0175;product=GTPase obg;protein_id=EGT83298.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142298 143468 . + . ID=id-GGE_0175;Note=multi-dom%3B label: obgE;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142298 143303 . + . ID=id-GGE_0175-2;Dbxref=InterPro:IPR014100,PIR:PIRSF002401;Note=gtp-binding protein%2C obg type~gtp-binding protein obg/cgta;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142304 143459 . + . ID=id-GGE_0175-3;Dbxref=InterPro:IPR014100;Note=HMMPanther:PTHR11702:SF3~mitochondrial gtpase 2(yeast)/obg-related~gtp-binding protein obg/cgta~HMMPanther:PTHR11702~family not named;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142304 143294 . + . ID=id-GGE_0175-4;Dbxref=InterPro:IPR014100;Note=HAMAP:MF_01454~gtpase_obg~gtp-binding protein obg/cgta;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142304 142769 . + . ID=id-GGE_0175-5;Dbxref=InterPro:IPR006169;Note=superfamily:SSF82051~obg gtp-binding protein n-terminal domain~gtp1/obg subdomain;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142304 142763 . + . ID=id-GGE_0175-6;Dbxref=InterPro:IPR006169;Note=Gene3D:2.70.210.12~gtp1/obg subdomain;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142307 143291 . + . ID=id-GGE_0175-7;Dbxref=InterPro:IPR014100,TIGRFAM:TIGR02729;Note=obg_cgta: obg family gtpase cgta~gtp-binding protein obg/cgta;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142307 142766 . + . ID=id-GGE_0175-8;Dbxref=InterPro:IPR006169,PFAM:PF01018;Note=gtp1_obg~gtp1/obg subdomain;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142307 142745 . + . ID=id-GGE_0175-9;Note=superfamily%3B label: GTP1_OBG superfamily;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142748 142847 . + . ID=id-GGE_0175-10;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142769 142820 . + . ID=id-GGE_0175-11;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142778 142817 . + . ID=id-GGE_0175-12;Note=specific~superfamily%3B label: Obg;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142778 142814 . + . ID=id-GGE_0175-13;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=obg;locus_tag=GGE_0175 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142322 142754 . - . ID=id-AFQR01000004.1:142322..142754;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142325 143171 . - . ID=id-AFQR01000004.1:142325..143171;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142337 142394 . - . ID=id-AFQR01000004.1:142337..142394;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142340 142937 . - . ID=id-AFQR01000004.1:142340..142937;Dbxref=InterPro:IPR006074;Note=PatternScan:PS00905~gtp1_obg~gtp1/obg%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142346 143399 . - . ID=id-AFQR01000004.1:142346..143399;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142346 142931 . - . ID=id-AFQR01000004.1:142346..142931;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142355 142982 . - . ID=id-AFQR01000004.1:142355..142982;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142355 142847 . - . ID=id-AFQR01000004.1:142355..142847;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142361 142784 . - . ID=id-AFQR01000004.1:142361..142784;Dbxref=InterPro:IPR006073;Note=FPrintScan:PR00326~gtp1obg~gtp1/obg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 142640 142811 . - . ID=id-AFQR01000004.1:142640..142811;Dbxref=InterPro:IPR002917,PFAM:PF01926;Note=mmr_hsr1~gtp-binding protein%2C hsr1-related;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 143543 143965 . - . ID=gene-GGE_0176;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank CDS 143543 143965 . - 0 ID=cds-EGT83299.1;Parent=gene-GGE_0176;Dbxref=GeneID:1171679,InterPro:IPR001564,InterPro:IPR023005,PFAM:PF00334,NCBI_GP:EGT83299.1;Name=EGT83299.1;Ontology_term=GO:0006241,GO:0006183,GO:0006228,GO:0005524,GO:0004550;gbkey=CDS;gene=ndk;go_function=ATP binding|0005524||,nucleoside diphosphate kinase activity|0004550||;go_process=CTP biosynthetic process|0006241||,GTP biosynthetic process|0006183||,UTP biosynthetic process|0006228||;locus_tag=GGE_0176;product=Nucleoside diphosphate kinase;protein_id=EGT83299.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143543 143960 . - . ID=id-GGE_0176;Dbxref=InterPro:IPR001564;Note=superfamily:SSF54919~nucleoside diphosphate kinase%2C ndk~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143549 143957 . - . ID=id-GGE_0176-2;Dbxref=InterPro:IPR001564;Note=Gene3D:3.30.70.141~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143549 143951 . - . ID=id-GGE_0176-3;Dbxref=InterPro:IPR001564;Note=HAMAP:MF_00451~ndp_kinase~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143552 143954 . - . ID=id-GGE_0176-4;Dbxref=InterPro:IPR001564;Note=HMMPanther:PTHR11349~family not named~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143552 143948 . - . ID=id-GGE_0176-5;Dbxref=InterPro:IPR001564,PFAM:PF00334;Note=ndk~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143552 143933 . - . ID=id-GGE_0176-6;Note=specific~superfamily%3B label: NDPk superfamily;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143558 143612 . - . ID=id-GGE_0176-7;Dbxref=InterPro:IPR001564;Note=FPrintScan:PR01243~nucdpkinase~nucleoside diphosphate kinase;gbkey=misc_feature;gene=ndk;locus_tag=GGE_0176 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143570 143882 . + . ID=id-AFQR01000004.1:143570..143882;Dbxref=InterPro:IPR023005;Note=PatternScan:PS00469~ndp_kinases~nucleoside diphosphate kinase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143594 143813 . + . ID=id-AFQR01000004.1:143594..143813;Dbxref=InterPro:IPR001564;Note=FPrintScan:PR01243~nucdpkinase~nucleoside diphosphate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143597 143750 . + . ID=id-AFQR01000004.1:143597..143750;Dbxref=InterPro:IPR001564;Note=FPrintScan:PR01243~nucdpkinase~nucleoside diphosphate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143603 143882 . + . ID=id-AFQR01000004.1:143603..143882;Dbxref=InterPro:IPR001564;Note=FPrintScan:PR01243~nucdpkinase~nucleoside diphosphate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143603 143690 . + . ID=id-AFQR01000004.1:143603..143690;Dbxref=InterPro:IPR001564;Note=FPrintScan:PR01243~nucdpkinase~nucleoside diphosphate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143702 143711 . + . ID=id-AFQR01000004.1:143702..143711;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 143975 145279 . - . ID=gene-GGE_0177;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank CDS 143975 145279 . - 0 ID=cds-EGT83300.1;Parent=gene-GGE_0177;Dbxref=GeneID:81336111,InterPro:IPR000819,InterPro:IPR008330,InterPro:IPR011356,PFAM:PF00883,PFAM:PF12404,PIR:PIRSF036388,NCBI_GP:EGT83300.1;Name=EGT83300.1;Ontology_term=GO:0019538,GO:0006508,GO:0005737,GO:0005622,GO:0004177,GO:0030145,GO:0008235;gbkey=CDS;gene=pepB;go_component=cytoplasm|0005737||,intracellular|0005622||;go_function=aminopeptidase activity|0004177||,manganese ion binding|0030145||,metalloexopeptidase activity|0008235||;go_process=protein metabolic process|0019538||,proteolysis|0006508||;locus_tag=GGE_0177;product=Peptidase B;protein_id=EGT83300.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143975 145277 . - . ID=id-GGE_0177;Dbxref=InterPro:IPR008330,PIR:PIRSF036388;Note=cytosol aminopeptidase%2C prokaryotic peptidase b~peptidase m17%2C peptidase b;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143975 145268 . - . ID=id-GGE_0177-2;Note=multi-dom%3B label: PRK05015;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143975 145265 . - . ID=id-GGE_0177-3;Dbxref=InterPro:IPR008330;Note=HAMAP:MF_00504~aminopeptidase_m17~peptidase m17%2C peptidase b;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143975 144212 . - . ID=id-GGE_0177-4;Dbxref=PFAM:PF12404;Note=duf3663;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144077 145160 . - . ID=id-GGE_0177-5;Note=specific~superfamily%3B label: Peptidase_M17;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144263 144980 . - . ID=id-GGE_0177-6;Note=Gene3D:3.40.630.10;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144263 144977 . - . ID=id-GGE_0177-7;Dbxref=InterPro:IPR011356;Note=HMMPanther:PTHR11963:SF3~leucine aminopeptidase~peptidase m17~HMMPanther:PTHR11963~family not named;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144275 144968 . - . ID=id-GGE_0177-8;Note=superfamily:SSF53187~zn-dependent exopeptidases;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144296 144932 . - . ID=id-GGE_0177-9;Dbxref=InterPro:IPR000819,PFAM:PF00883;Note=peptidase_m17~peptidase m17%2C leucyl aminopeptidase;gbkey=misc_feature;gene=pepB;locus_tag=GGE_0177 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 143999 144809 . + . ID=id-AFQR01000004.1:143999..144809;Dbxref=InterPro:IPR000819;Note=PatternScan:PS00631~cytosol_ap~peptidase m17%2C leucyl aminopeptidase;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144014 144644 . + . ID=id-AFQR01000004.1:144014..144644;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144023 144881 . + . ID=id-AFQR01000004.1:144023..144881;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144029 144554 . + . ID=id-AFQR01000004.1:144029..144554;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144038 144797 . + . ID=id-AFQR01000004.1:144038..144797;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144041 144731 . + . ID=id-AFQR01000004.1:144041..144731;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 144041 144620 . + . ID=id-AFQR01000004.1:144041..144620;Dbxref=InterPro:IPR011356;Note=FPrintScan:PR00481~lamnopptdase~peptidase m17;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145157 145166 . + . ID=id-AFQR01000004.1:145157..145166;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 145342 146388 . - . ID=gene-GGE_0178;Name=GGE_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank CDS 145342 146388 . - 0 ID=cds-EGT83301.1;Parent=gene-GGE_0178;Dbxref=GeneID:148832474,InterPro:IPR001509,InterPro:IPR005888,InterPro:IPR016040,PFAM:PF01370,TIGRFAM:TIGR01181,NCBI_GP:EGT83301.1;Name=EGT83301.1;Note=ABR14152;Ontology_term=GO:0044237,GO:0008152,GO:0009225,GO:0005488,GO:0003824,GO:0050662,GO:0008460;gbkey=CDS;go_function=binding|0005488||,catalytic activity|0003824||,coenzyme binding|0050662||,dTDP-glucose 4 6-dehydratase activity|0008460||;go_process=cellular metabolic process|0044237||,metabolic process|0008152||,nucleotide-sugar metabolic process|0009225||;locus_tag=GGE_0178;product=RfbB;protein_id=EGT83301.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145342 146377 . - . ID=id-GGE_0178;Note=HMMPanther:PTHR10366:SF41~dtdp-glucose 4%2C6-dehydratase~HMMPanther:PTHR10366~family not named;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145354 145942 . - . ID=id-GGE_0178-2;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145360 146347 . - . ID=id-GGE_0178-3;Note=specific~superfamily%3B label: dTDP_GD_SDR_e;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145363 146359 . - . ID=id-GGE_0178-4;Dbxref=InterPro:IPR005888,TIGRFAM:TIGR01181;Note=dtdp_gluc_dehyt: dtdp-glucose 4%2C6-deh~dtdp-glucose 4%2C6-dehydratase;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145363 146332 . - . ID=id-GGE_0178-5;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145363 145402 . - . ID=id-GGE_0178-6;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145366 146356 . - . ID=id-GGE_0178-7;Note=multi-dom%3B label: PRK10084;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145366 146089 . - . ID=id-GGE_0178-8;Dbxref=InterPro:IPR001509,PFAM:PF01370;Note=epimerase~nad-dependent epimerase/dehydratase;gbkey=misc_feature;locus_tag=GGE_0178 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145390 145810 . + . ID=id-AFQR01000004.1:145390..145810;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 145438 146287 . + . ID=id-AFQR01000004.1:145438..146287;Note=Gene3D:3.90.25.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146424 146433 . + . ID=id-AFQR01000004.1:146424..146433;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146441 146450 . - . ID=id-AFQR01000004.1:146441..146450;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 146476 147888 . - . ID=gene-GGE_0179;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank CDS 146476 147888 . - 0 ID=cds-EGT83302.1;Parent=gene-GGE_0179;Dbxref=GeneID:1169927,InterPro:IPR001637,InterPro:IPR004809,InterPro:IPR008146,InterPro:IPR008147,InterPro:IPR014746,PFAM:PF00120,PFAM:PF03951,TIGRFAM:TIGR00653,NCBI_GP:EGT83302.1;Name=EGT83302.1;Ontology_term=GO:0006542,GO:0006807,GO:0009399,GO:0005737,GO:0003824,GO:0004356;gbkey=CDS;gene=glnA;go_component=cytoplasm|0005737||;go_function=catalytic activity|0003824||,glutamate-ammonia ligase activity|0004356||;go_process=glutamine biosynthetic process|0006542||,nitrogen compound metabolic process|0006807||,nitrogen fixation|0009399||;locus_tag=GGE_0179;product=Glutamine synthetase;protein_id=EGT83302.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146476 147883 . - . ID=id-GGE_0179;Note=HMMPanther:PTHR20852:SF7~glutamine synthetase bacteria~HMMPanther:PTHR20852~family not named;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146488 146776 . - . ID=id-GGE_0179-2;Dbxref=InterPro:IPR008147;Note=superfamily:SSF54368~glutamine synthetase domain~glutamine synthetase%2C beta-grasp;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146494 147871 . - . ID=id-GGE_0179-3;Dbxref=InterPro:IPR004809,TIGRFAM:TIGR00653;Note=glna: glutamine synthetase%2C type i~glutamine synthetase type i;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146494 146782 . - . ID=id-GGE_0179-4;Dbxref=InterPro:IPR008147;Note=Gene3D:3.10.20.70~glutamine synthetase%2C beta-grasp;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146497 147868 . - . ID=id-GGE_0179-5;Note=multi-dom%3B label: glnA;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146524 146722 . - . ID=id-GGE_0179-6;Dbxref=InterPro:IPR008147,PFAM:PF03951;Note=superfamily~gln-synt_n~glutamine synthetase%2C beta-grasp%3B label: Gln-synt_N superfamily;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146788 147574 . - . ID=id-GGE_0179-7;Note=superfamily:SSF55931~glutamine synthetase/guanido kinase;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146788 147310 . - . ID=id-GGE_0179-8;Note=superfamily%3B label: Gln-synt_C superfamily;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146791 147307 . - . ID=id-GGE_0179-9;Dbxref=InterPro:IPR008146,PFAM:PF00120;Note=gln-synt_c~glutamine synthetase%2C catalytic domain;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146800 147526 . - . ID=id-GGE_0179-10;Dbxref=InterPro:IPR014746;Note=Gene3D:3.30.590.10~glutamine synthetase/guanido kinase%2C catalytic domain;gbkey=misc_feature;gene=glnA;locus_tag=GGE_0179 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146515 147640 . + . ID=id-AFQR01000004.1:146515..147640;Dbxref=InterPro:IPR001637;Note=PatternScan:PS00182~glna_adenylation~glutamine synthetase class-i%2C adenylation site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146524 147259 . + . ID=id-AFQR01000004.1:146524..147259;Dbxref=InterPro:IPR008146;Note=PatternScan:PS00181~glna_atp~glutamine synthetase%2C catalytic domain;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146533 146632 . + . ID=id-AFQR01000004.1:146533..146632;Dbxref=InterPro:IPR008147;Note=PatternScan:PS00180~glna_1~glutamine synthetase%2C beta-grasp;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146542 147718 . + . ID=id-AFQR01000004.1:146542..147718;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 146993 147002 . + . ID=id-AFQR01000004.1:146993..147002;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 148300 148440 . + . ID=gene-GGE_0180;Name=GGE_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0180 GCA_000222085.2|AFQR01000004.1 Genbank CDS 148300 148440 . + 0 ID=cds-EGT83303.1;Parent=gene-GGE_0180;Dbxref=InterPro:IPR009251,PFAM:PF06002,NCBI_GP:EGT83303.1;Name=EGT83303.1;Note=Hypothetical alpha-2%2C3-sialyltransferase;gbkey=CDS;locus_tag=GGE_0180;product=putative alpha-2%2C3-sialyltransferase;protein_id=EGT83303.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 148300 148438 . + . ID=id-GGE_0180;Dbxref=InterPro:IPR009251,PFAM:PF06002;Note=superfamily~cst-i~alpha-2%2C3-sialyltransferase~Gene3D:3.90.1480.10~alpha-2%2C3-sialyltransferase%3B label: CST-I superfamily;gbkey=misc_feature;locus_tag=GGE_0180 GCA_000222085.2|AFQR01000004.1 Genbank gene 148519 148773 . + . ID=gene-GGE_0181;Name=GGE_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0181 GCA_000222085.2|AFQR01000004.1 Genbank CDS 148519 148773 . + 0 ID=cds-EGT83304.1;Parent=gene-GGE_0181;Dbxref=InterPro:IPR009251,PFAM:PF06002,NCBI_GP:EGT83304.1;Name=EGT83304.1;Note=Hypothetical alpha-2%2C3-sialyltransferase;gbkey=CDS;locus_tag=GGE_0181;product=putative alpha-2%2C3-sialyltransferase;protein_id=EGT83304.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 148519 148759 . + . ID=id-GGE_0181;Dbxref=InterPro:IPR009251;Note=Gene3D:3.90.1480.10~alpha-2%2C3-sialyltransferase;gbkey=misc_feature;locus_tag=GGE_0181 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 148519 148750 . + . ID=id-GGE_0181-2;Dbxref=InterPro:IPR009251,PFAM:PF06002;Note=superfamily~cst-i~alpha-2%2C3-sialyltransferase%3B label: CST-I superfamily;gbkey=misc_feature;locus_tag=GGE_0181 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 148519 148726 . + . ID=id-GGE_0181-3;Dbxref=InterPro:IPR009251;Note=superfamily:SSF102414~alpha-2%2C3/8-sialyltransferase cstii~alpha-2%2C3-sialyltransferase;gbkey=misc_feature;locus_tag=GGE_0181 GCA_000222085.2|AFQR01000004.1 Genbank gene 149131 150981 . + . ID=gene-GGE_0182;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank CDS 149131 150981 . + 0 ID=cds-EGT83305.1;Parent=gene-GGE_0182;Dbxref=GeneID:1176325,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006298,InterPro:IPR009000,InterPro:IPR009022,PFAM:PF00009,PFAM:PF00679,PFAM:PF03144,TIGRFAM:TIGR00231,TIGRFAM:TIGR01394,NCBI_GP:EGT83305.1;Name=EGT83305.1;Ontology_term=GO:0005622,GO:0005525,GO:0003924;gbkey=CDS;gene=typA;go_component=intracellular|0005622||;go_function=GTP binding|0005525||,GTPase activity|0003924||;locus_tag=GGE_0182;product=GTP-binding protein TypA/BipA;protein_id=EGT83305.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149146 150598 . + . ID=id-GGE_0182;Note=HMMPanther:PTHR23115:SF14~gtp-binding protein typa/bipa~HMMPanther:PTHR23115~family not named;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149146 149797 . + . ID=id-GGE_0182-2;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149146 149755 . + . ID=id-GGE_0182-3;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149149 150946 . + . ID=id-GGE_0182-4;Note=multi-dom%3B label: TypA;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149155 149713 . + . ID=id-GGE_0182-5;Dbxref=InterPro:IPR000795,PFAM:PF00009;Note=gtp_eftu~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149155 149668 . + . ID=id-GGE_0182-6;Dbxref=InterPro:IPR005225,TIGRFAM:TIGR00231;Note=small_gtp: small gtp-binding protein domain~small gtp-binding protein;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149158 149716 . + . ID=id-GGE_0182-7;Note=specific~superfamily%3B label: Ras_like_GTPase superfamily;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149161 150919 . + . ID=id-GGE_0182-8;Dbxref=InterPro:IPR006298,TIGRFAM:TIGR01394;Note=typa_bipa: gtp-binding protein typa/bipa~gtp-binding protein typa;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149167 149173 . + . ID=id-GGE_0182-9;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature;gene=typA;locus_tag=GGE_0182 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149158 149302 . - . ID=id-AFQR01000004.1:149158..149302;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149161 149518 . - . ID=id-AFQR01000004.1:149161..149518;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149164 149362 . - . ID=id-AFQR01000004.1:149164..149362;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149167 149410 . - . ID=id-AFQR01000004.1:149167..149410;Dbxref=InterPro:IPR000795;Note=FPrintScan:PR00315~elongatnfct~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149170 149413 . - . ID=id-AFQR01000004.1:149170..149413;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149176 149803 . - . ID=id-AFQR01000004.1:149176..149803;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149179 149281 . - . ID=id-AFQR01000004.1:149179..149281;Dbxref=InterPro:IPR000795;Note=PatternScan:PS00301~efactor_gtp~protein synthesis factor%2C gtp-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149269 150181 . - . ID=id-AFQR01000004.1:149269..150181;Note=Gene3D:3.30.70.870;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149344 149806 . - . ID=id-AFQR01000004.1:149344..149806;Dbxref=InterPro:IPR004161,PFAM:PF03144;Note=gtp_eftu_d2~translation elongation factor eftu/ef1a%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149368 150343 . - . ID=id-AFQR01000004.1:149368..150343;Note=specific~superfamily%3B label: BipA_TypA_C;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149374 150340 . - . ID=id-AFQR01000004.1:149374..150340;Dbxref=InterPro:IPR000640,PFAM:PF00679;Note=efg_c~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149389 150055 . - . ID=id-AFQR01000004.1:149389..150055;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149389 149764 . - . ID=id-AFQR01000004.1:149389..149764;Note=specific~superfamily%3B label: BipA_TypA_II;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149425 149770 . - . ID=id-AFQR01000004.1:149425..149770;Note=Gene3D:2.40.30.10;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149449 150319 . - . ID=id-AFQR01000004.1:149449..150319;Dbxref=InterPro:IPR000640;Note=Gene3D:3.30.70.240~translation elongation factor efg/ef2;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149482 150343 . - . ID=id-AFQR01000004.1:149482..150343;Dbxref=InterPro:IPR009022;Note=superfamily:SSF54980~ef-g c-terminal domain-like~elongation factor g/iii/v;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 149503 149686 . - . ID=id-AFQR01000004.1:149503..149686;Dbxref=InterPro:IPR009000;Note=superfamily:SSF50447~translation proteins~translation elongation/initiation factor/ribosomal%2C beta-barrel;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151016 151025 . - . ID=id-AFQR01000004.1:151016..151025;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151038 151047 . + . ID=id-AFQR01000004.1:151038..151047;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 151068 151757 . - . ID=gene-GGE_0183;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank CDS 151068 151757 . - 0 ID=cds-EGT83306.1;Parent=gene-GGE_0183;Dbxref=GeneID:85700384,InterPro:IPR000659,InterPro:IPR009002,InterPro:IPR011576,InterPro:IPR012349,InterPro:IPR019576,InterPro:IPR019740,PFAM:PF01243,PFAM:PF10590,TIGRFAM:TIGR00558,NCBI_GP:EGT83306.1;Name=EGT83306.1;Ontology_term=GO:0055114,GO:0008615,GO:0010181,GO:0016638,GO:0004733;gbkey=CDS;gene=pdxH;go_function=FMN binding|0010181||,oxidoreductase activity acting on the CH-NH2 group of donors|0016638||,pyridoxamine-phosphate oxidase activity|0004733||;go_process=oxidation-reduction process|0055114||,pyridoxine biosynthetic process|0008615||;locus_tag=GGE_0183;product=putative phosphate synthase-like protein;protein_id=EGT83306.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151110 151716 . - . ID=id-GGE_0183;Dbxref=InterPro:IPR000659,TIGRFAM:TIGR00558;Note=pdxh: pyridoxamine 5'-phosphate oxidase~pyridoxamine 5'-phosphate oxidase;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151146 151680 . - . ID=id-GGE_0183-2;Dbxref=InterPro:IPR009002;Note=superfamily:SSF50475~fmn-binding split barrel~fmn-binding split barrel-related;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151149 151677 . - . ID=id-GGE_0183-3;Dbxref=InterPro:IPR000659;Note=HAMAP:MF_01629~pdxh~pyridoxamine 5'-phosphate oxidase;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151152 151674 . - . ID=id-GGE_0183-4;Dbxref=InterPro:IPR012349;Note=Gene3D:2.30.110.10~fmn-binding split barrel;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151176 151650 . - . ID=id-GGE_0183-5;Note=multi-dom%3B label: PRK05679;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151188 151638 . - . ID=id-GGE_0183-6;Dbxref=InterPro:IPR000659;Note=HMMPanther:PTHR10851~pyridoxine-5-phosphate oxidase~pyridoxamine 5'-phosphate oxidase;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151224 151326 . - . ID=id-GGE_0183-7;Note=superfamily%3B label: PNPOx_like superfamily;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151227 151320 . - . ID=id-GGE_0183-8;Dbxref=InterPro:IPR011576,PFAM:PF01243;Note=pyridox_oxidase~pyridoxamine 5'-phosphate oxidase-like%2C fmn-binding domain;gbkey=misc_feature;gene=pdxH;locus_tag=GGE_0183 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151107 151566 . + . ID=id-AFQR01000004.1:151107..151566;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151110 151665 . + . ID=id-AFQR01000004.1:151110..151665;Dbxref=InterPro:IPR019740;Note=PatternScan:PS01064~pyridox_oxidase~pyridoxamine 5'-phosphate oxidase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151191 151635 . + . ID=id-AFQR01000004.1:151191..151635;Dbxref=InterPro:IPR019576,PFAM:PF10590;Note=superfamily~pnpox_c~pyridoxine 5'-phosphate oxidase%2C dimerization%3B label: PNPOx_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 151891 152598 . + . ID=gene-GGE_0184;Name=GGE_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0184 GCA_000222085.2|AFQR01000004.1 Genbank CDS 151891 152598 . + 0 ID=cds-EGT83307.1;Parent=gene-GGE_0184;Dbxref=GeneID:1176279,InterPro:IPR003744,PFAM:PF02592,TIGRFAM:TIGR00697,NCBI_GP:EGT83307.1;Name=EGT83307.1;Note=HI_0862;gbkey=CDS;locus_tag=GGE_0184;product=hypothetical protein;protein_id=EGT83307.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151906 152554 . + . ID=id-GGE_0184;Note=superfamily%3B label: DUF165 superfamily;gbkey=misc_feature;locus_tag=GGE_0184 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151936 152518 . + . ID=id-GGE_0184-2;Dbxref=InterPro:IPR003744,TIGRFAM:TIGR00697;Note=tigr00697: conserved hypothetical integral~protein of unknown function duf165;gbkey=misc_feature;locus_tag=GGE_0184 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151942 151960 . + . ID=id-GGE_0184-3;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0184 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152068 152323 . + . ID=id-GGE_0184-4;Dbxref=InterPro:IPR003744,PFAM:PF02592;Note=duf165~protein of unknown function duf165;gbkey=misc_feature;locus_tag=GGE_0184 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151951 152155 . - . ID=id-AFQR01000004.1:151951..152155;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151960 152488 . - . ID=id-AFQR01000004.1:151960..152488;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151960 152362 . - . ID=id-AFQR01000004.1:151960..152362;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151960 152257 . - . ID=id-AFQR01000004.1:151960..152257;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 151960 152068 . - . ID=id-AFQR01000004.1:151960..152068;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152698 152707 . - . ID=id-AFQR01000004.1:152698..152707;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank gene 152814 153857 . + . ID=gene-GGE_0185;Name=GGE_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0185 GCA_000222085.2|AFQR01000004.1 Genbank CDS 152814 153857 . + 0 ID=cds-EGT83308.1;Parent=gene-GGE_0185;Dbxref=GeneID:325577643,InterPro:IPR007272,PFAM:PF04143,NCBI_GP:EGT83308.1;Name=EGT83308.1;Note=ZP_08147918;gbkey=CDS;locus_tag=GGE_0185;product=YeeE/YedE family membrane protein;protein_id=EGT83308.1;transl_table=11 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152820 152850 . + . ID=id-GGE_0185;Note=seg;gbkey=misc_feature;locus_tag=GGE_0185 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152856 153105 . + . ID=id-GGE_0185-2;Note=multi-dom%3B label: PRK11099;gbkey=misc_feature;locus_tag=GGE_0185 GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152856 153036 . - . ID=id-AFQR01000004.1:152856..153036;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152868 152928 . - . ID=id-AFQR01000004.1:152868..152928;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152871 153261 . - . ID=id-AFQR01000004.1:152871..153261;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152874 153765 . - . ID=id-AFQR01000004.1:152874..153765;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152874 153549 . - . ID=id-AFQR01000004.1:152874..153549;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152883 153669 . - . ID=id-AFQR01000004.1:152883..153669;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152883 153399 . - . ID=id-AFQR01000004.1:152883..153399;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152883 153126 . - . ID=id-AFQR01000004.1:152883..153126;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152883 153024 . - . ID=id-AFQR01000004.1:152883..153024;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152934 153033 . - . ID=id-AFQR01000004.1:152934..153033;Dbxref=InterPro:IPR007272,PFAM:PF04143;Note=duf395~domain of unknown function duf395%2C yeee/yede;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 152937 153657 . - . ID=id-AFQR01000004.1:152937..153657;Dbxref=InterPro:IPR007272,PFAM:PF04143;Note=duf395~domain of unknown function duf395%2C yeee/yede;gbkey=misc_feature GCA_000222085.2|AFQR01000004.1 Genbank sequence_feature 153096 153567 . - . ID=id-AFQR01000004.1:153096..153567;Note=multi-dom%3B label: PRK11099;gbkey=misc_feature ##sequence-region AFQR01000003.1 1 41590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000003.1 Genbank region 1 41590 . + . ID=AFQR01000003.1:1..41590;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000003.1 Genbank gene 490 4740 . - . ID=gene-GGE_0010;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank CDS 490 4740 . - 0 ID=cds-EGT83309.1;Parent=gene-GGE_0010;Dbxref=GeneID:212288495,InterPro:IPR000722,InterPro:IPR007066,InterPro:IPR007080,InterPro:IPR007081,InterPro:IPR007083,InterPro:IPR012754,PFAM:PF00623,PFAM:PF04983,PFAM:PF04997,PFAM:PF04998,PFAM:PF05000,TIGRFAM:TIGR02386,NCBI_GP:EGT83309.1;Name=EGT83309.1;Ontology_term=GO:0006350,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||,DNA-directed RNA polymerase activity|0003899||;go_process=transcription|0006350||;locus_tag=GGE_0010;product=putative transcriptase-like protein;protein_id=EGT83309.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 502 4729 . - . ID=id-GGE_0010;Note=HMMPanther:PTHR19376:SF4~dna-directed rna polymerase beta chain~HMMPanther:PTHR19376~family not named;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 532 2284 . - . ID=id-GGE_0010-2;Note=HAMAP:MF_01323~rnapol_bact_rpoc1;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 535 4567 . - . ID=id-GGE_0010-3;Note=superfamily:SSF64484~beta and beta-prime subunits of dna dependent rna-polymerase;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 535 3010 . - . ID=id-GGE_0010-4;Note=multi-dom%3B label: RpoC;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 538 4606 . - . ID=id-GGE_0010-5;Dbxref=InterPro:IPR012754;Note=HAMAP:MF_01322~rnapol_bact_rpoc~dna-directed rna polymerase%2C subunit beta-prime;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 538 1474 . - . ID=id-GGE_0010-6;Note=superfamily%3B label: RNA_pol_Rpb1_1 superfamily;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 541 1471 . - . ID=id-GGE_0010-7;Dbxref=InterPro:IPR007080,PFAM:PF04997;Note=rna_pol_rpb1_1~rna polymerase rpb1%2C domain 1;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 550 4537 . - . ID=id-GGE_0010-8;Dbxref=InterPro:IPR012754,TIGRFAM:TIGR02386;Note=rpoc_tigr: dna-directed rna polymerase%2C bet~dna-directed rna polymerase%2C subunit beta-prime;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 1198 1321 . - . ID=id-GGE_0010-9;Note=superfamily%3B label: RNA_pol_Rpb1_2 superfamily;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 2263 2356 . - . ID=id-GGE_0010-10;Note=multi-dom%3B label: rpoC2_cyan;gbkey=misc_feature;gene=rpoC;locus_tag=GGE_0010 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 520 3313 . + . ID=id-AFQR01000003.1:520..3313;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 529 1129 . + . ID=id-AFQR01000003.1:529..1129;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 532 1303 . + . ID=id-AFQR01000003.1:532..1303;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 538 1216 . + . ID=id-AFQR01000003.1:538..1216;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 544 2449 . + . ID=id-AFQR01000003.1:544..2449;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 547 3889 . + . ID=id-AFQR01000003.1:547..3889;Note=superfamily%3B label: RNAP_largest_subunit_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 577 1066 . + . ID=id-AFQR01000003.1:577..1066;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 589 3214 . + . ID=id-AFQR01000003.1:589..3214;Note=superfamily%3B label: RNAP_largest_subunit_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 655 3961 . + . ID=id-AFQR01000003.1:655..3961;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 760 2515 . + . ID=id-AFQR01000003.1:760..2515;Dbxref=InterPro:IPR007083,PFAM:PF05000;Note=rna_pol_rpb1_4~rna polymerase rpb1%2C domain 4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 766 2512 . + . ID=id-AFQR01000003.1:766..2512;Note=superfamily%3B label: RNA_pol_Rpb1_4 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 919 1525 . + . ID=id-AFQR01000003.1:919..1525;Dbxref=InterPro:IPR000722,PFAM:PF00623;Note=rna_pol_rpb1_2~rna polymerase%2C alpha subunit;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 934 4138 . + . ID=id-AFQR01000003.1:934..4138;Note=specific~superfamily%3B label: RNAP_beta'_C;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 958 1960 . + . ID=id-AFQR01000003.1:958..1960;Dbxref=InterPro:IPR007066,PFAM:PF04983;Note=superfamily~rna_pol_rpb1_3~rna polymerase rpb1%2C domain 3%3B label: RNA_pol_Rpb1_3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 2155 2791 . + . ID=id-AFQR01000003.1:2155..2791;Dbxref=InterPro:IPR007081,PFAM:PF04998;Note=rna_pol_rpb1_5~rna polymerase rpb1%2C domain 5;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4769 4778 . + . ID=id-AFQR01000003.1:4769..4778;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 4865 8893 . - . ID=gene-GGE_0011;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank CDS 4865 8893 . - 0 ID=cds-EGT83310.1;Parent=gene-GGE_0011;Dbxref=GeneID:81336482,InterPro:IPR007120,InterPro:IPR007121,InterPro:IPR007641,InterPro:IPR007642,InterPro:IPR007644,InterPro:IPR007645,InterPro:IPR010243,InterPro:IPR014724,InterPro:IPR015712,InterPro:IPR019462,PFAM:PF00562,PFAM:PF04560,PFAM:PF04561,PFAM:PF04563,PFAM:PF04565,PFAM:PF10385,TIGRFAM:TIGR02013,NCBI_GP:EGT83310.1;Name=EGT83310.1;Ontology_term=GO:0006351,GO:0006350,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||,DNA-directed RNA polymerase activity|0003899||,ribonucleoside binding|0032549||;go_process=transcription DNA-dependent|0006351||,transcription|0006350||;locus_tag=GGE_0011;product=DNA-directed RNA polymerase subunit beta;protein_id=EGT83310.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4865 8891 . - . ID=id-GGE_0011;Dbxref=InterPro:IPR015712;Note=HMMPanther:PTHR20856:SF3~dna-directed rna polymerase beta chain~HMMPanther:PTHR20856~family not named~dna-directed rna polymerase%2C subunit 2;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4871 8888 . - . ID=id-GGE_0011-2;Note=superfamily:SSF64484~beta and beta-prime subunits of dna dependent rna-polymerase;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4889 8861 . - . ID=id-GGE_0011-3;Dbxref=InterPro:IPR010243,TIGRFAM:TIGR02013;Note=rpob: dna-directed rna polymerase%2C beta subu~dna-directed rna polymerase%2C beta subunit%2C bacterial-type;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4904 8855 . - . ID=id-GGE_0011-4;Dbxref=InterPro:IPR010243;Note=HAMAP:MF_01321~rnapol_bact_rpob~dna-directed rna polymerase%2C beta subunit%2C bacterial-type;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4946 6314 . - . ID=id-GGE_0011-5;Dbxref=InterPro:IPR007644,PFAM:PF04563;Note=rna_pol_rpb2_1~rna polymerase%2C beta subunit%2C protrusion;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4946 5480 . - . ID=id-GGE_0011-6;Note=superfamily%3B label: RNA_pol_B_RPB2 superfamily;gbkey=misc_feature;gene=rpoB;locus_tag=GGE_0011 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4901 8006 . + . ID=id-AFQR01000003.1:4901..8006;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4901 6833 . + . ID=id-AFQR01000003.1:4901..6833;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4904 8057 . + . ID=id-AFQR01000003.1:4904..8057;Dbxref=InterPro:IPR007121;Note=PatternScan:PS01166~rna_pol_beta~rna polymerase%2C beta subunit%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4907 7892 . + . ID=id-AFQR01000003.1:4907..7892;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4916 8000 . + . ID=id-AFQR01000003.1:4916..8000;Dbxref=InterPro:IPR014724;Note=Gene3D:2.40.50.150~rna polymerase rpb2%2C ob-fold;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4964 7880 . + . ID=id-AFQR01000003.1:4964..7880;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 4973 7676 . + . ID=id-AFQR01000003.1:4973..7676;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5033 6842 . + . ID=id-AFQR01000003.1:5033..6842;Note=Gene3D:3.90.1100.10;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5048 5687 . + . ID=id-AFQR01000003.1:5048..5687;Note=multi-dom%3B label: PRK00566;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5063 6641 . + . ID=id-AFQR01000003.1:5063..6641;Dbxref=InterPro:IPR019462;Note=Gene3D:2.30.150.10~dna-directed rna polymerase%2C beta subunit%2C external 1 domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5066 6638 . + . ID=id-AFQR01000003.1:5066..6638;Dbxref=InterPro:IPR019462,PFAM:PF10385;Note=rna_pol_rpb2_45~dna-directed rna polymerase%2C beta subunit%2C external 1 domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5075 6404 . + . ID=id-AFQR01000003.1:5075..6404;Dbxref=InterPro:IPR007645,PFAM:PF04565;Note=rna_pol_rpb2_3~rna polymerase rpb2%2C domain 3;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5084 5318 . + . ID=id-AFQR01000003.1:5084..5318;Dbxref=InterPro:IPR007642,PFAM:PF04561;Note=rna_pol_rpb2_2~rna polymerase rpb2%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5093 8663 . + . ID=id-AFQR01000003.1:5093..8663;Dbxref=InterPro:IPR007641,PFAM:PF04560;Note=rna_pol_rpb2_7~rna polymerase rpb2%2C domain 7;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5099 7013 . + . ID=id-AFQR01000003.1:5099..7013;Note=Gene3D:2.40.50.100;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5171 5891 . + . ID=id-AFQR01000003.1:5171..5891;Note=Gene3D:3.90.1110.10;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5177 5918 . + . ID=id-AFQR01000003.1:5177..5918;Dbxref=InterPro:IPR007642,PFAM:PF04561;Note=rna_pol_rpb2_2~rna polymerase rpb2%2C domain 2;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5345 7235 . + . ID=id-AFQR01000003.1:5345..7235;Note=superfamily%3B label: RNA_pol_B_RPB2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5396 5864 . + . ID=id-AFQR01000003.1:5396..5864;Note=superfamily%3B label: RNA_pol_Rpb2_1 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5408 8051 . + . ID=id-AFQR01000003.1:5408..8051;Dbxref=InterPro:IPR007120;Note=Gene3D:2.40.270.10~dna-directed rna polymerase%2C subunit 2%2C domain 6;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5711 8042 . + . ID=id-AFQR01000003.1:5711..8042;Note=specific~superfamily%3B label: RNA_pol_B_RPB2;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 5735 6134 . + . ID=id-AFQR01000003.1:5735..6134;Note=specific~superfamily%3B label: RNA_pol_B_RPB2;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 6509 7016 . + . ID=id-AFQR01000003.1:6509..7016;Dbxref=InterPro:IPR007120,PFAM:PF00562;Note=rna_pol_rpb2_6~dna-directed rna polymerase%2C subunit 2%2C domain 6;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9228 9237 . - . ID=id-AFQR01000003.1:9228..9237;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9241 9250 . + . ID=id-AFQR01000003.1:9241..9250;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 9275 9964 . - . ID=gene-GGE_0012;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank CDS 9275 9964 . - 0 ID=cds-EGT83311.1;Parent=gene-GGE_0012;Dbxref=GeneID:1172985,InterPro:IPR002143,InterPro:IPR005878,InterPro:IPR016094,InterPro:IPR016095,PFAM:PF00687,PIR:PIRSF002155,TIGRFAM:TIGR01169,NCBI_GP:EGT83311.1;Name=EGT83311.1;Ontology_term=GO:0006396,GO:0006412,GO:0005622,GO:0015934,GO:0005840,GO:0003723,GO:0003735;gbkey=CDS;gene=rplA;go_component=intracellular|0005622||,large ribosomal subunit|0015934||,ribosome|0005840||;go_function=RNA binding|0003723||,structural constituent of ribosome|0003735||;go_process=RNA processing|0006396||,translation|0006412||;locus_tag=GGE_0012;product=50S ribosomal protein L1;protein_id=EGT83311.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9275 9956 . - . ID=id-GGE_0012;Dbxref=InterPro:IPR002143,PIR:PIRSF002155;Note=ribosomal protein%2C l1p/l1a/l10e/organellar l1 types~ribosomal protein l1;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9284 9956 . - . ID=id-GGE_0012-2;Dbxref=InterPro:IPR005878,TIGRFAM:TIGR01169;Note=rpla_bact: ribosomal protein l1~ribosomal protein l1%2C bacterial-type;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9293 9944 . - . ID=id-GGE_0012-3;Dbxref=InterPro:IPR002143;Note=superfamily:SSF56808~ribosomal protein l1~ribosomal protein l1;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9299 9941 . - . ID=id-GGE_0012-4;Note=HMMPanther:PTHR23105:SF5~50s ribosomal protein l1p~HMMPanther:PTHR23105~family not named;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9320 9896 . - . ID=id-GGE_0012-5;Dbxref=InterPro:IPR002143,PFAM:PF00687;Note=ribosomal_l1~ribosomal protein l1;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9344 9881 . - . ID=id-GGE_0012-6;Note=specific~superfamily%3B label: Ribosomal_L1;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9482 9548 . - . ID=id-GGE_0012-7;Dbxref=InterPro:IPR016095;Note=Gene3D:3.40.50.790~ribosomal protein l1%2C 3-layer alpha/beta-sandwich;gbkey=misc_feature;gene=rplA;locus_tag=GGE_0012 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9314 9518 . + . ID=id-AFQR01000003.1:9314..9518;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9332 9638 . + . ID=id-AFQR01000003.1:9332..9638;Dbxref=InterPro:IPR002143;Note=PatternScan:PS01199~ribosomal_l1~ribosomal protein l1;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9341 9827 . + . ID=id-AFQR01000003.1:9341..9827;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9476 9755 . + . ID=id-AFQR01000003.1:9476..9755;Dbxref=InterPro:IPR016094;Note=Gene3D:3.30.190.20~ribosomal protein l1%2C 2-layer alpha/beta-sandwich;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 9969 10397 . - . ID=gene-GGE_0013;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank CDS 9969 10397 . - 0 ID=cds-EGT83312.1;Parent=gene-GGE_0013;Dbxref=GeneID:166230142,InterPro:IPR000911,InterPro:IPR006519,InterPro:IPR020783,InterPro:IPR020784,PFAM:PF00298,PFAM:PF03946,TIGRFAM:TIGR01632,NCBI_GP:EGT83312.1;Name=EGT83312.1;Ontology_term=GO:0006412,GO:0005840,GO:0003735;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0013;product=50S ribosomal protein L11;protein_id=EGT83312.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9969 10395 . - . ID=id-GGE_0013;Note=multi-dom%3B label: rplK;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9969 10224 . - . ID=id-GGE_0013-2;Dbxref=InterPro:IPR020784;Note=superfamily:SSF54747~ribosomal l11/l12e n-terminal domain~ribosomal protein l11;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9978 10389 . - . ID=id-GGE_0013-3;Dbxref=InterPro:IPR006519,TIGRFAM:TIGR01632;Note=l11_bact: ribosomal protein l11~ribosomal protein l11%2C bacterial-type;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9978 10386 . - . ID=id-GGE_0013-4;Dbxref=InterPro:IPR000911;Note=HMMPanther:PTHR11661:SF4~50s ribosomal protein l11~HMMPanther:PTHR11661~family not named~ribosomal protein l11;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9978 10179 . - . ID=id-GGE_0013-5;Dbxref=InterPro:IPR020784;Note=Gene3D:3.30.1550.10~ribosomal protein l11;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9993 10149 . - . ID=id-GGE_0013-6;Dbxref=InterPro:IPR020784,PFAM:PF03946;Note=ribosomal_l11_n~ribosomal protein l11;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 9996 10365 . - . ID=id-GGE_0013-7;Note=specific~superfamily%3B label: Ribosomal_L11;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10077 10086 . - . ID=id-GGE_0013-8;Note=BlastProDom:PD001367~rl11_haedu_o32613;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10173 10191 . - . ID=id-GGE_0013-9;Dbxref=InterPro:IPR020783;Note=superfamily:SSF46906~ribosomal protein l11 domain~ribosomal protein l11 domain;gbkey=misc_feature;gene=rplK;locus_tag=GGE_0013 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10005 10212 . + . ID=id-AFQR01000003.1:10005..10212;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10176 10188 . + . ID=id-AFQR01000003.1:10176..10188;Dbxref=InterPro:IPR020783;Note=Gene3D:1.10.10.250~ribosomal protein l11 domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10176 10185 . + . ID=id-AFQR01000003.1:10176..10185;Dbxref=InterPro:IPR020783,PFAM:PF00298;Note=ribosomal_l11~ribosomal protein l11 domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10523 10532 . + . ID=id-AFQR01000003.1:10523..10532;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 10570 11286 . - . ID=gene-GGE_0014;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank CDS 10570 11286 . - 0 ID=cds-EGT83313.1;Parent=gene-GGE_0014;Dbxref=GeneID:1169271,InterPro:IPR000845,InterPro:IPR004402,InterPro:IPR018016,InterPro:IPR018017,PFAM:PF01048,TIGRFAM:TIGR00107,NCBI_GP:EGT83313.1;Name=EGT83313.1;Ontology_term=GO:0006139,GO:0009116,GO:0003824,GO:0004731,GO:0016763;gbkey=CDS;gene=deoD;go_function=catalytic activity|0003824||,purine-nucleoside phosphorylase activity|0004731||,transferase activity transferring pentosyl groups|0016763||;go_process=nucleobase nucleoside nucleotide and nucleic acid metabolic process|0006139||,nucleoside metabolic process|0009116||;locus_tag=GGE_0014;product=Purine nucleoside phosphorylase deoD-type;protein_id=EGT83313.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10570 11281 . - . ID=id-GGE_0014;Note=superfamily:SSF53167~purine and uridine phosphorylases;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10570 11275 . - . ID=id-GGE_0014-2;Note=superfamily%3B label: PNP_UDP_1 superfamily;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10570 11272 . - . ID=id-GGE_0014-3;Dbxref=InterPro:IPR004402;Note=HAMAP:MF_01627~pur_nucleosid_phosp~purine nucleoside phosphorylase;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10570 11269 . - . ID=id-GGE_0014-4;Dbxref=InterPro:IPR018017;Note=HMMPanther:PTHR21234:SF7~purine nucleoside phosphorylase~HMMPanther:PTHR21234~family not named~nucleoside phosphorylase;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10579 11260 . - . ID=id-GGE_0014-5;Note=multi-dom%3B label: Udp;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10582 11266 . - . ID=id-GGE_0014-6;Dbxref=InterPro:IPR004402,TIGRFAM:TIGR00107;Note=deod: purine nucleoside phosphorylase~purine nucleoside phosphorylase;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10597 11242 . - . ID=id-GGE_0014-7;Note=Gene3D:3.40.50.1580;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10615 11173 . - . ID=id-GGE_0014-8;Dbxref=InterPro:IPR000845,PFAM:PF01048;Note=pnp_udp_1~nucleoside phosphorylase domain;gbkey=misc_feature;gene=deoD;locus_tag=GGE_0014 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10618 10753 . + . ID=id-AFQR01000003.1:10618..10753;Dbxref=InterPro:IPR018016;Note=PatternScan:PS01232~pnp_udp_1~nucleoside phosphorylase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 10666 10930 . + . ID=id-AFQR01000003.1:10666..10930;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11319 11328 . + . ID=id-AFQR01000003.1:11319..11328;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 11356 12609 . - . ID=gene-GGE_0015;Name=GGE_0015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank CDS 11356 12609 . - 0 ID=cds-EGT83314.1;Parent=gene-GGE_0015;Dbxref=GeneID:1175856,InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011642,InterPro:IPR011657,InterPro:IPR018270,PFAM:PF01773,PFAM:PF07662,PFAM:PF07670,TIGRFAM:TIGR00804,NCBI_GP:EGT83314.1;Name=EGT83314.1;Note=HI_0519;Ontology_term=GO:0006810,GO:0016020,GO:0001882,GO:0005415;gbkey=CDS;go_component=membrane|0016020||;go_function=nucleoside binding|0001882||,nucleoside:sodium symporter activity|0005415||;go_process=transport|0006810||;locus_tag=GGE_0015;product=putative concentrative nucleoside transporter%2C metazoan/bacterial;protein_id=EGT83314.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11356 12589 . - . ID=id-GGE_0015;Dbxref=InterPro:IPR008276;Note=HMMPanther:PTHR10590~sodium/nucleoside cotransporter~concentrative nucleoside transporter;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11368 12574 . - . ID=id-GGE_0015-2;Dbxref=InterPro:IPR018270,TIGRFAM:TIGR00804;Note=nupc: nucleoside transporter%2C nupc family~concentrative nucleoside transporter%2C metazoan/bacterial;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11368 12553 . - . ID=id-GGE_0015-3;Note=multi-dom%3B label: nupC;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11368 11410 . - . ID=id-GGE_0015-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11380 11581 . - . ID=id-GGE_0015-5;Dbxref=InterPro:IPR002668,PFAM:PF01773;Note=superfamily~nucleos_tra2_n~na dependent nucleoside transporter%3B label: Nucleos_tra2_N superfamily;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11635 11653 . - . ID=id-GGE_0015-6;Note=superfamily%3B label: Gate superfamily;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11638 11641 . - . ID=id-GGE_0015-7;Dbxref=InterPro:IPR011642,PFAM:PF07670;Note=gate~nucleoside recognition;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11944 12001 . - . ID=id-GGE_0015-8;Dbxref=InterPro:IPR011657,PFAM:PF07662;Note=nucleos_tra2_c~na dependent nucleoside transporter;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11944 11977 . - . ID=id-GGE_0015-9;Note=superfamily%3B label: Nucleos_tra2_C superfamily;gbkey=misc_feature;locus_tag=GGE_0015 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11380 12460 . + . ID=id-AFQR01000003.1:11380..12460;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11401 12565 . + . ID=id-AFQR01000003.1:11401..12565;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 12535 . + . ID=id-AFQR01000003.1:11425..12535;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 12409 . + . ID=id-AFQR01000003.1:11425..12409;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 12112 . + . ID=id-AFQR01000003.1:11425..12112;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 11938 . + . ID=id-AFQR01000003.1:11425..11938;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 11860 . + . ID=id-AFQR01000003.1:11425..11860;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 11626 . + . ID=id-AFQR01000003.1:11425..11626;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 11425 11434 . + . ID=id-AFQR01000003.1:11425..11434;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12689 12698 . - . ID=id-AFQR01000003.1:12689..12698;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 12711 13499 . - . ID=gene-GGE_0016;Name=GGE_0016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank CDS 12711 13499 . - 0 ID=cds-EGT83315.1;Parent=gene-GGE_0016;Dbxref=InterPro:IPR001989,InterPro:IPR007197,PFAM:PF04055,NCBI_GP:EGT83315.1;Name=EGT83315.1;Note=HI_0520;Ontology_term=GO:0055114,GO:0006800,GO:0051539,GO:0003824,GO:0051536,GO:0016491;gbkey=CDS;go_function=4 iron 4 sulfur cluster binding|0051539||,catalytic activity|0003824||,iron-sulfur cluster binding|0051536||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||,oxygen and reactive oxygen species metabolic process|0006800||;locus_tag=GGE_0016;product=putative radical-activating enzyme;protein_id=EGT83315.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12741 13467 . - . ID=id-GGE_0016;Note=multi-dom%3B label: activase_YjjW;gbkey=misc_feature;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12795 13029 . - . ID=id-GGE_0016-2;Note=superfamily:SSF102114~radical sam enzyme;gbkey=misc_feature;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12798 13026 . - . ID=id-GGE_0016-3;Dbxref=InterPro:IPR007197,PFAM:PF04055;Note=radical_sam~radical sam;gbkey=misc_feature;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12798 12993 . - . ID=id-GGE_0016-4;Note=specific~superfamily%3B label: Radical_SAM;gbkey=misc_feature;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12930 13269 . - . ID=id-GGE_0016-5;Note=Gene3D:3.80.30.10;gbkey=misc_feature;locus_tag=GGE_0016 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 12777 12777 . + . ID=id-AFQR01000003.1:12777..12777;Dbxref=InterPro:IPR001989;Note=PatternScan:PS01087~radical_activating~radical-activating enzyme%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 13508 15052 . - . ID=gene-GGE_0017;Name=GGE_0017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank CDS 13508 15052 . - 0 ID=cds-EGT83316.1;Parent=gene-GGE_0017;Dbxref=GeneID:1176477,InterPro:IPR016905,PFAM:PF11230,PIR:PIRSF028991,NCBI_GP:EGT83316.1;Name=EGT83316.1;Note=HI_0521;gbkey=CDS;locus_tag=GGE_0017;product=Hypothetical protein;protein_id=EGT83316.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 13508 15050 . - . ID=id-GGE_0017;Dbxref=InterPro:IPR016905,PIR:PIRSF028991;Note=predicted glycyl radical enzyme%2C hi0521 type~glycyl radical enzyme%2C hi0521%2C predicted;gbkey=misc_feature;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 13526 15008 . - . ID=id-GGE_0017-2;Note=multi-dom%3B label: glycyl_YjjI;gbkey=misc_feature;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 13556 14978 . - . ID=id-GGE_0017-3;Dbxref=InterPro:IPR016905,PFAM:PF11230;Note=superfamily~duf3029~glycyl radical enzyme%2C hi0521%2C predicted%3B label: Gly_radical superfamily;gbkey=misc_feature;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 13586 14909 . - . ID=id-GGE_0017-4;Note=superfamily:SSF51998~pfl-like glycyl radical enzyme;gbkey=misc_feature;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 13742 13985 . - . ID=id-GGE_0017-5;Note=Gene3D:3.20.70.20;gbkey=misc_feature;locus_tag=GGE_0017 GCA_000222085.2|AFQR01000003.1 Genbank gene 15265 16305 . - . ID=gene-GGE_0018;Name=GGE_0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank CDS 15265 16305 . - 0 ID=cds-EGT83317.1;Parent=gene-GGE_0018;Dbxref=InterPro:IPR002201,PFAM:PF01075,NCBI_GP:EGT83317.1;Name=EGT83317.1;Note=HI_0523;Ontology_term=GO:0008152,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||;go_process=metabolic process|0008152||;locus_tag=GGE_0018;product=putative uDP-Glycosyltransferase/glycogen phosphorylase;protein_id=EGT83317.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15265 16282 . - . ID=id-GGE_0018;Note=multi-dom%3B label: RfaF;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15271 16285 . - . ID=id-GGE_0018-2;Note=superfamily:SSF53756~udp-glycosyltransferase/glycogen phosphorylase;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15274 16192 . - . ID=id-GGE_0018-3;Note=specific~superfamily%3B label: Glycosyltransferase_GTB_type superfamily;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15274 15682 . - . ID=id-GGE_0018-4;Note=Gene3D:3.40.50.2000;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15475 15973 . - . ID=id-GGE_0018-5;Dbxref=InterPro:IPR002201,PFAM:PF01075;Note=glyco_transf_9~glycosyl transferase%2C family 9;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15814 15823 . - . ID=id-GGE_0018-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0018 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 15742 15784 . + . ID=id-AFQR01000003.1:15742..15784;Note=Gene3D:3.40.50.2000;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16337 16346 . + . ID=id-AFQR01000003.1:16337..16346;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 16372 17451 . - . ID=gene-GGE_0019;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank CDS 16372 17451 . - 0 ID=cds-EGT83318.1;Parent=gene-GGE_0019;Dbxref=GeneID:1168413,InterPro:IPR000771,InterPro:IPR006411,InterPro:IPR013785,PFAM:PF01116,PIR:PIRSF001359,TIGRFAM:TIGR00167,TIGRFAM:TIGR01520,NCBI_GP:EGT83318.1;Name=EGT83318.1;Ontology_term=GO:0006096,GO:0008152,GO:0003824,GO:0004332,GO:0008270;gbkey=CDS;gene=fba;go_function=catalytic activity|0003824||,fructose-bisphosphate aldolase activity|0004332||,zinc ion binding|0008270||;go_process=glycolysis|0006096||,metabolic process|0008152||;locus_tag=GGE_0019;product=Fructose-bisphosphate aldolase;protein_id=EGT83318.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16378 17446 . - . ID=id-GGE_0019;Note=superfamily:SSF51569~aldolase;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16384 17440 . - . ID=id-GGE_0019-2;Dbxref=InterPro:IPR006411,TIGRFAM:TIGR01520;Note=frubisaldo_ii_a: fructose-bisphosphat~fructose-bisphosphate aldolase%2C class ii%2C yeast/e. coli subtype;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16402 17422 . - . ID=id-GGE_0019-3;Note=multi-dom%3B label: PRK09197;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16405 17413 . - . ID=id-GGE_0019-4;Dbxref=InterPro:IPR013785;Note=Gene3D:3.20.20.70~aldolase-type tim barrel;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16408 17416 . - . ID=id-GGE_0019-5;Dbxref=InterPro:IPR000771,PIR:PIRSF001359;Note=fructose-bisphosphate aldolase ii~ketose-bisphosphate aldolase%2C class-ii;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16411 17413 . - . ID=id-GGE_0019-6;Dbxref=InterPro:IPR000771,TIGRFAM:TIGR00167;Note=cbba: ketose-bisphosphate aldolases~ketose-bisphosphate aldolase%2C class-ii;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16417 17407 . - . ID=id-GGE_0019-7;Note=specific~superfamily%3B label: FBP_aldolase_IIA;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16417 17401 . - . ID=id-GGE_0019-8;Dbxref=InterPro:IPR000771,PFAM:PF01116;Note=f_bp_aldolase~ketose-bisphosphate aldolase%2C class-ii;gbkey=misc_feature;gene=fba;locus_tag=GGE_0019 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16408 16888 . + . ID=id-AFQR01000003.1:16408..16888;Dbxref=InterPro:IPR000771;Note=PatternScan:PS00806~aldolase_class_ii_2~ketose-bisphosphate aldolase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16408 16675 . + . ID=id-AFQR01000003.1:16408..16675;Dbxref=InterPro:IPR000771;Note=PatternScan:PS00602~aldolase_class_ii_1~ketose-bisphosphate aldolase%2C class-ii;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 16411 16891 . + . ID=id-AFQR01000003.1:16411..16891;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17561 17570 . + . ID=id-AFQR01000003.1:17561..17570;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 17571 18731 . - . ID=gene-GGE_0020;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank CDS 17571 18731 . - 0 ID=cds-EGT83319.1;Parent=gene-GGE_0020;Dbxref=GeneID:166987788,InterPro:IPR001576,InterPro:IPR015824,InterPro:IPR015901,InterPro:IPR015911,PFAM:PF00162,NCBI_GP:EGT83319.1;Name=EGT83319.1;Ontology_term=GO:0006096,GO:0004618;gbkey=CDS;gene=pgk;go_function=phosphoglycerate kinase activity|0004618||;go_process=glycolysis|0006096||;locus_tag=GGE_0020;product=Phosphoglycerate kinase;protein_id=EGT83319.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17571 18729 . - . ID=id-GGE_0020;Dbxref=InterPro:IPR001576;Note=HMMPanther:PTHR11406~family not named~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17577 18723 . - . ID=id-GGE_0020-2;Dbxref=InterPro:IPR001576;Note=superfamily:SSF53748~phosphoglycerate kinase~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17586 18069 . - . ID=id-GGE_0020-3;Dbxref=InterPro:IPR015824;Note=Gene3D:3.40.50.1260~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17589 18699 . - . ID=id-GGE_0020-4;Note=superfamily%3B label: Phosphoglycerate_kinase superfamily;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17589 18672 . - . ID=id-GGE_0020-5;Dbxref=InterPro:IPR001576,PFAM:PF00162;Note=pgk~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17595 18696 . - . ID=id-GGE_0020-6;Dbxref=InterPro:IPR001576;Note=HAMAP:MF_00145~phosphoglyc_kinase~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17601 17622 . - . ID=id-GGE_0020-7;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 18084 18177 . - . ID=id-GGE_0020-8;Dbxref=InterPro:IPR015901;Note=Gene3D:3.40.50.1270~phosphoglycerate kinase;gbkey=misc_feature;gene=pgk;locus_tag=GGE_0020 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17601 18354 . + . ID=id-AFQR01000003.1:17601..18354;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17604 17616 . + . ID=id-AFQR01000003.1:17604..17616;Dbxref=InterPro:IPR015911;Note=PatternScan:PS00111~pglycerate_kinase~phosphoglycerate kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17607 18576 . + . ID=id-AFQR01000003.1:17607..18576;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17619 17880 . + . ID=id-AFQR01000003.1:17619..17880;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17625 18645 . + . ID=id-AFQR01000003.1:17625..18645;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17631 18126 . + . ID=id-AFQR01000003.1:17631..18126;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17640 18057 . + . ID=id-AFQR01000003.1:17640..18057;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17640 17964 . + . ID=id-AFQR01000003.1:17640..17964;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17640 17664 . + . ID=id-AFQR01000003.1:17640..17664;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 17649 18477 . + . ID=id-AFQR01000003.1:17649..18477;Dbxref=InterPro:IPR001576;Note=FPrintScan:PR00477~phglyckinase~phosphoglycerate kinase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 18827 19597 . - . ID=gene-GGE_0021;Name=GGE_0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank CDS 18827 19597 . - 0 ID=cds-EGT83320.1;Parent=gene-GGE_0021;Dbxref=InterPro:IPR001568,InterPro:IPR018188,PFAM:PF00445,NCBI_GP:EGT83320.1;Name=EGT83320.1;Note=HI_0526;Ontology_term=GO:0003723,GO:0033897;gbkey=CDS;go_function=RNA binding|0003723||,ribonuclease T2 activity|0033897||;locus_tag=GGE_0021;product=Putative ribonuclease;protein_id=EGT83320.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 18845 18860 . - . ID=id-GGE_0021;Note=seg;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19082 19340 . - . ID=id-GGE_0021-2;Dbxref=InterPro:IPR001568;Note=Gene3D:3.90.730.10~ribonuclease t2;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19082 19337 . - . ID=id-GGE_0021-3;Dbxref=InterPro:IPR001568;Note=superfamily:SSF55895~ribonuclease rh-like~ribonuclease t2;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19091 19328 . - . ID=id-GGE_0021-4;Dbxref=InterPro:IPR001568,PFAM:PF00445;Note=ribonuclease_t2~ribonuclease t2;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19094 19322 . - . ID=id-GGE_0021-5;Note=specific~superfamily%3B label: RNase_T2 superfamily;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19094 19124 . - . ID=id-GGE_0021-6;Dbxref=InterPro:IPR001568;Note=HMMPanther:PTHR11240~family not named~ribonuclease t2;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19412 19421 . - . ID=id-GGE_0021-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;locus_tag=GGE_0021 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 18851 19214 . + . ID=id-AFQR01000003.1:18851..19214;Dbxref=InterPro:IPR018188;Note=PatternScan:PS00530~rnase_t2_1~ribonuclease t2%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 18863 19352 . + . ID=id-AFQR01000003.1:18863..19352;Dbxref=InterPro:IPR018188;Note=PatternScan:PS00531~rnase_t2_2~ribonuclease t2%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 19675 19935 . + . ID=gene-GGE_0022;Name=GGE_0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank CDS 19675 19935 . + 0 ID=cds-EGT83321.1;Parent=gene-GGE_0022;Dbxref=GeneID:1723604,InterPro:IPR001173,InterPro:IPR004368,InterPro:IPR005631,InterPro:IPR006196,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR017896,InterPro:IPR017900,PFAM:PF00535,PFAM:PF01176,PFAM:PF03937,TIGRFAM:TIGR00008,NCBI_GP:EGT83321.1;Name=EGT83321.1;Note=HI_0527;Ontology_term=GO:0006413,GO:0003723,GO:0009055,GO:0051536,GO:0003743;gbkey=CDS;go_function=RNA binding|0003723||,electron carrier activity|0009055||,iron-sulfur cluster binding|0051536||,translation initiation factor activity|0003743||;go_process=translational initiation|0006413||;locus_tag=GGE_0022;product=putative 4Fe-4S ferredoxin%2C iron-sulpur binding domain-containing protein;protein_id=EGT83321.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19675 19762 . + . ID=id-GGE_0022;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19681 19918 . + . ID=id-GGE_0022-2;Note=superfamily:SSF54862~4fe-4s ferredoxins;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19687 19891 . + . ID=id-GGE_0022-3;Note=Gene3D:3.30.70.20;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19702 19831 . + . ID=id-GGE_0022-4;Note=multi-dom%3B label: PRK07118;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19702 19711 . + . ID=id-GGE_0022-5;Dbxref=InterPro:IPR017900;Note=PatternScan:PS00198~4fe4s_fer_1~4fe-4s ferredoxin%2C iron-sulphur binding%2C conserved site;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 19768 19780 . + . ID=id-GGE_0022-6;Dbxref=InterPro:IPR017896;Note=ProfileScan:PS51379~4fe4s_fer_2~4fe-4s ferredoxin%2C iron-sulpur binding domain;gbkey=misc_feature;locus_tag=GGE_0022 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20027 20036 . - . ID=id-AFQR01000003.1:20027..20036;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 20078 21298 . - . ID=gene-GGE_0023;Name=GGE_0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank CDS 20078 21298 . - 0 ID=cds-EGT83322.1;Parent=gene-GGE_0023;Dbxref=GeneID:1174835,InterPro:IPR002091,InterPro:IPR002293,InterPro:IPR013059,InterPro:IPR013061,InterPro:IPR018227,PFAM:PF03222,TIGRFAM:TIGR00837,NCBI_GP:EGT83322.1;Name=EGT83322.1;Note=tyrP-B;Ontology_term=GO:0006865,GO:0015801,GO:0055085,GO:0005887,GO:0016020,GO:0015171,GO:0015173;gbkey=CDS;go_component=integral to plasma membrane|0005887||,membrane|0016020||;go_function=amino acid transmembrane transporter activity|0015171||,aromatic amino acid transmembrane transporter activity|0015173||;go_process=amino acid transport|0006865||,aromatic amino acid transport|0015801||,transmembrane transport|0055085||;locus_tag=GGE_0023;product=Tyrosine-specific transport protein 2;protein_id=EGT83322.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20078 21281 . - . ID=id-GGE_0023;Note=multi-dom%3B label: SdaC;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20090 21245 . - . ID=id-GGE_0023-2;Dbxref=InterPro:IPR018227,PFAM:PF03222;Note=trp_tyr_perm~tryptophan/tyrosine permease;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20099 21272 . - . ID=id-GGE_0023-3;Dbxref=InterPro:IPR002293;Note=HMMPanther:PTHR11785:SF133~tryptophan permease~HMMPanther:PTHR11785~family not named~amino acid/polyamine transporter i;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20099 20147 . - . ID=id-GGE_0023-4;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20102 21215 . - . ID=id-GGE_0023-5;Dbxref=InterPro:IPR013059,TIGRFAM:TIGR00837;Note=superfamily~araap: aromatic amino acid transport protein~tryptophan/tyrosine transporter%3B label: Aa_trans superfamily;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20111 20150 . - . ID=id-GGE_0023-6;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature;locus_tag=GGE_0023 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20105 20387 . + . ID=id-AFQR01000003.1:20105..20387;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20114 20192 . + . ID=id-AFQR01000003.1:20114..20192;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20129 20132 . + . ID=id-AFQR01000003.1:20129..20132;Dbxref=InterPro:IPR013061;Note=PatternScan:PS00594~aromatic_aa_permease_1~tryptophan/tryrosine permease%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20132 21020 . + . ID=id-AFQR01000003.1:20132..21020;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20135 21032 . + . ID=id-AFQR01000003.1:20135..21032;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20135 20330 . + . ID=id-AFQR01000003.1:20135..20330;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20138 21095 . + . ID=id-AFQR01000003.1:20138..21095;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20138 20930 . + . ID=id-AFQR01000003.1:20138..20930;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20138 20747 . + . ID=id-AFQR01000003.1:20138..20747;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20138 20732 . + . ID=id-AFQR01000003.1:20138..20732;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20138 20192 . + . ID=id-AFQR01000003.1:20138..20192;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20141 20528 . + . ID=id-AFQR01000003.1:20141..20528;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20141 20330 . + . ID=id-AFQR01000003.1:20141..20330;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 21209 . + . ID=id-AFQR01000003.1:20147..21209;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 21083 . + . ID=id-AFQR01000003.1:20147..21083;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20915 . + . ID=id-AFQR01000003.1:20147..20915;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20630 . + . ID=id-AFQR01000003.1:20147..20630;Dbxref=InterPro:IPR002091;Note=FPrintScan:PR00166~aroaaprmease~aromatic amino acid permease;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20627 . + . ID=id-AFQR01000003.1:20147..20627;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20516 . + . ID=id-AFQR01000003.1:20147..20516;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20429 . + . ID=id-AFQR01000003.1:20147..20429;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20318 . + . ID=id-AFQR01000003.1:20147..20318;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 20147 20180 . + . ID=id-AFQR01000003.1:20147..20180;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 21355 21936 . - . ID=gene-GGE_0024;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank CDS 21355 21936 . - 0 ID=cds-EGT83323.1;Parent=gene-GGE_0024;Dbxref=GeneID:1170667,InterPro:IPR001267,InterPro:IPR020633,InterPro:IPR020634,PFAM:PF00265,PIR:PIRSF035805,NCBI_GP:EGT83323.1;Name=EGT83323.1;Ontology_term=GO:0006259,GO:0005737,GO:0005524,GO:0004797;gbkey=CDS;gene=tdk;go_component=cytoplasm|0005737||;go_function=ATP binding|0005524||,thymidine kinase activity|0004797||;go_process=DNA metabolic process|0006259||;locus_tag=GGE_0024;product=Thymidine kinase;protein_id=EGT83323.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21355 21934 . - . ID=id-GGE_0024;Dbxref=InterPro:IPR001267,PIR:PIRSF035805;Note=thymidine kinase~thymidine kinase;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21355 21925 . - . ID=id-GGE_0024-2;Dbxref=InterPro:IPR020634;Note=HAMAP:MF_00124~thymidine_kinase~thymidine kinase%2C subgroup;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21355 21922 . - . ID=id-GGE_0024-3;Dbxref=InterPro:IPR001267;Note=HMMPanther:PTHR11441~family not named~thymidine kinase;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21355 21919 . - . ID=id-GGE_0024-4;Note=superfamily%3B label: TK superfamily;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21355 21778 . - . ID=id-GGE_0024-5;Note=superfamily:SSF52540~p-loop containing nucleoside triphosphate hydrolase;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21363 21372 . - . ID=id-GGE_0024-6;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21364 21907 . - . ID=id-GGE_0024-7;Dbxref=InterPro:IPR001267,PFAM:PF00265;Note=tk~thymidine kinase;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21394 21643 . - . ID=id-GGE_0024-8;Note=Gene3D:3.40.50.300;gbkey=misc_feature;gene=tdk;locus_tag=GGE_0024 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21397 21874 . + . ID=id-AFQR01000003.1:21397..21874;Dbxref=InterPro:IPR020633;Note=PatternScan:PS00603~tk_cellular_type~thymidine kinase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21508 21781 . + . ID=id-AFQR01000003.1:21508..21781;Note=superfamily:SSF57716~glucocorticoid receptor-like (dna-binding domain);gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 21945 22973 . - . ID=gene-GGE_0025;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank CDS 21945 22973 . - 0 ID=cds-EGT83324.1;Parent=gene-GGE_0025;Dbxref=GeneID:1169880,InterPro:IPR000905,InterPro:IPR017860,InterPro:IPR017861,InterPro:IPR022450,PFAM:PF00814,TIGRFAM:TIGR00329,TIGRFAM:TIGR03723,NCBI_GP:EGT83324.1;Name=EGT83324.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=gcp;go_function=metalloendopeptidase activity|0004222||;go_process=proteolysis|0006508||;locus_tag=GGE_0025;product=Putative O-sialoglycoprotein endopeptidase;protein_id=EGT83324.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21945 22971 . - . ID=id-GGE_0025;Note=multi-dom%3B label: PRK09604;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21945 22959 . - . ID=id-GGE_0025-2;Note=HMMPanther:PTHR11735~family not named;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21945 22956 . - . ID=id-GGE_0025-3;Dbxref=InterPro:IPR022450;Note=HAMAP:MF_01445~glycoptase_bact~peptidase m22%2C o-sialoglycoprotein peptidase;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21945 22899 . - . ID=id-GGE_0025-4;Note=superfamily:SSF53067~actin-like atpase domain;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21954 22896 . - . ID=id-GGE_0025-5;Dbxref=InterPro:IPR022450,TIGRFAM:TIGR03723;Note=bact_gcp: putative glycoprotease gcp~peptidase m22%2C o-sialoglycoprotein peptidase;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21954 22266 . - . ID=id-GGE_0025-6;Note=superfamily%3B label: COG1214 superfamily;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21957 22869 . - . ID=id-GGE_0025-7;Dbxref=InterPro:IPR017861,TIGRFAM:TIGR00329;Note=gcp_kae1: metallohydrolase%2C glycoprotease/ka~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21957 21987 . - . ID=id-GGE_0025-8;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 22017 22812 . - . ID=id-GGE_0025-9;Dbxref=InterPro:IPR000905,PFAM:PF00814;Note=peptidase_m22~peptidase m22%2C glycoprotease;gbkey=misc_feature;gene=gcp;locus_tag=GGE_0025 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21975 22749 . + . ID=id-AFQR01000003.1:21975..22749;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21975 22194 . + . ID=id-AFQR01000003.1:21975..22194;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 21984 22338 . + . ID=id-AFQR01000003.1:21984..22338;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 22005 22236 . + . ID=id-AFQR01000003.1:22005..22236;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 22008 22233 . + . ID=id-AFQR01000003.1:22008..22233;Dbxref=InterPro:IPR017860;Note=PatternScan:PS01016~glycoprotease~peptidase m22%2C glycoprotease%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 22008 22173 . + . ID=id-AFQR01000003.1:22008..22173;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 22011 22407 . + . ID=id-AFQR01000003.1:22011..22407;Dbxref=InterPro:IPR017861;Note=FPrintScan:PR00789~osialoptase~peptidase m22%2C glycoprotease%2C subgroup;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 23205 23420 . + . ID=gene-GGE_0026;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank CDS 23205 23420 . + 0 ID=cds-EGT83325.1;Parent=gene-GGE_0026;Dbxref=GeneID:1173233,InterPro:IPR001911,InterPro:IPR018278,PFAM:PF01165,TIGRFAM:TIGR00030,NCBI_GP:EGT83325.1;Name=EGT83325.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsU;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0026;product=30S ribosomal protein S21;protein_id=EGT83325.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23205 23397 . + . ID=id-GGE_0026;Note=superfamily%3B label: Ribosomal_S21 superfamily;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23205 23376 . + . ID=id-GGE_0026-2;Dbxref=InterPro:IPR001911;Note=HAMAP:MF_00358~ribosomal_s21~ribosomal protein s21;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23211 23379 . + . ID=id-GGE_0026-3;Dbxref=InterPro:IPR001911,TIGRFAM:TIGR00030;Note=s21p: ribosomal protein s21~ribosomal protein s21;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23214 23373 . + . ID=id-GGE_0026-4;Dbxref=InterPro:IPR001911,PFAM:PF01165;Note=ribosomal_s21~ribosomal protein s21;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23220 23232 . + . ID=id-GGE_0026-5;Dbxref=InterPro:IPR001911;Note=FPrintScan:PR00976~ribosomals21~ribosomal protein s21;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23244 23244 . + . ID=id-GGE_0026-6;Dbxref=InterPro:IPR018278;Note=PatternScan:PS01181~ribosomal_s21~ribosomal protein s21%2C conserved site;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23250 23331 . + . ID=id-GGE_0026-7;Dbxref=InterPro:IPR001911;Note=BlastProDom:PD005521~rs21_haein_p44386~ribosomal protein s21;gbkey=misc_feature;gene=rpsU;locus_tag=GGE_0026 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23235 23244 . - . ID=id-AFQR01000003.1:23235..23244;Dbxref=InterPro:IPR001911;Note=FPrintScan:PR00976~ribosomals21~ribosomal protein s21;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23238 23316 . - . ID=id-AFQR01000003.1:23238..23316;Dbxref=InterPro:IPR001911;Note=FPrintScan:PR00976~ribosomals21~ribosomal protein s21;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23238 23280 . - . ID=id-AFQR01000003.1:23238..23280;Dbxref=InterPro:IPR001911;Note=FPrintScan:PR00976~ribosomals21~ribosomal protein s21;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23517 23526 . - . ID=id-AFQR01000003.1:23517..23526;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 23554 25335 . + . ID=gene-GGE_0027;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank CDS 23554 25335 . + 0 ID=cds-EGT83326.1;Parent=gene-GGE_0027;Dbxref=GeneID:1172619,InterPro:IPR002694,InterPro:IPR006171,InterPro:IPR006295,InterPro:IPR013173,InterPro:IPR013264,InterPro:IPR016136,InterPro:IPR019475,PFAM:PF01751,PFAM:PF01807,PFAM:PF08275,PFAM:PF08278,PFAM:PF10410,TIGRFAM:TIGR01391,NCBI_GP:EGT83326.1;Name=EGT83326.1;Ontology_term=GO:0006269,GO:0006260,GO:0003677,GO:0003896,GO:0016779,GO:0008270;gbkey=CDS;gene=dnaG;go_function=DNA binding|0003677||,DNA primase activity|0003896||,nucleotidyltransferase activity|0016779||,zinc ion binding|0008270||;go_process=DNA replication synthesis of RNA primer|0006269||,DNA replication|0006260||;locus_tag=GGE_0027;product=DNA primase;protein_id=EGT83326.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23560 23860 . + . ID=id-GGE_0027;Note=superfamily:SSF57783~zinc beta-ribbon;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23563 25312 . + . ID=id-GGE_0027-2;Note=multi-dom%3B label: dnaG;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23563 23851 . + . ID=id-GGE_0027-3;Dbxref=InterPro:IPR002694;Note=Gene3D:3.90.580.10~zinc finger%2C chc2-type;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23566 24805 . + . ID=id-GGE_0027-4;Dbxref=InterPro:IPR006295,TIGRFAM:TIGR01391;Note=dnag: dna primase~dna primase%2C dnag;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23569 23845 . + . ID=id-GGE_0027-5;Note=superfamily%3B label: zf-CHC2 superfamily;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23572 23842 . + . ID=id-GGE_0027-6;Dbxref=InterPro:IPR002694,PFAM:PF01807;Note=zf-chc2~zinc finger%2C chc2-type;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23908 24490 . + . ID=id-GGE_0027-7;Note=superfamily:SSF56731~dna primase core;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23908 23926 . + . ID=id-GGE_0027-8;Dbxref=InterPro:IPR013264;Note=Gene3D:3.90.980.10~dna primase%2C catalytic core;gbkey=misc_feature;gene=dnaG;locus_tag=GGE_0027 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23593 24484 . - . ID=id-AFQR01000003.1:23593..24484;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23731 24661 . - . ID=id-AFQR01000003.1:23731..24661;Dbxref=InterPro:IPR019475,PFAM:PF10410;Note=superfamily~dnab_bind~dna primase%2C dnab-helicase binding domain~Gene3D:1.20.50.20%3B label: DnaB_bind superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23800 24334 . - . ID=id-AFQR01000003.1:23800..24334;Dbxref=InterPro:IPR006171,PFAM:PF01751;Note=specific~superfamily~toprim~toprim domain%3B label: TOPRIM superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23926 23941 . - . ID=id-AFQR01000003.1:23926..23941;Dbxref=InterPro:IPR013264,PFAM:PF08275;Note=toprim_n~dna primase%2C catalytic core;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23929 23941 . - . ID=id-AFQR01000003.1:23929..23941;Note=superfamily%3B label: Toprim_N superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23932 24916 . - . ID=id-AFQR01000003.1:23932..24916;Dbxref=InterPro:IPR013173,PFAM:PF08278;Note=superfamily~dnag_dnab_bind~dna primase dnag%2C dnab-binding%3B label: DnaG_DnaB_bind superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23932 24280 . - . ID=id-AFQR01000003.1:23932..24280;Note=Gene3D:3.40.1360.10;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23956 24907 . - . ID=id-AFQR01000003.1:23956..24907;Note=superfamily:SSF117023~dna primase dnag domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 23974 24880 . - . ID=id-AFQR01000003.1:23974..24880;Dbxref=InterPro:IPR016136;Note=Gene3D:1.10.860.10~dna helicase dnab/dna primase dnag;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25029 25038 . - . ID=id-AFQR01000003.1:25029..25038;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 25407 27263 . + . ID=gene-GGE_0028;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank CDS 25407 27263 . + 0 ID=cds-EGT83327.1;Parent=gene-GGE_0028;Dbxref=GeneID:1173125,InterPro:IPR000943,InterPro:IPR007127,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR007631,InterPro:IPR009042,InterPro:IPR011991,InterPro:IPR012760,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,PFAM:PF00140,PFAM:PF03979,PFAM:PF04539,PFAM:PF04542,PFAM:PF04545,PFAM:PF04546,TIGRFAM:TIGR02393,TIGRFAM:TIGR02937,NCBI_GP:EGT83327.1;Name=EGT83327.1;Ontology_term=GO:0006355,GO:0045449,GO:0006352,GO:0003677,GO:0003700,GO:0016987,GO:0030528;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||,sigma factor activity|0016987||,transcription regulator activity|0030528||;go_process=regulation of transcription DNA-dependent|0006355||,regulation of transcription|0045449||,transcription initiation DNA-dependent|0006352||;locus_tag=GGE_0028;product=RNA polymerase sigma factor rpoD;protein_id=EGT83327.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25413 25473 . + . ID=id-GGE_0028;Note=coiled-coil;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25425 27246 . + . ID=id-GGE_0028-2;Note=multi-dom%3B label: PRK05658;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25431 25653 . + . ID=id-GGE_0028-3;Note=superfamily%3B label: Sigma70_r1_1 superfamily;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25434 25647 . + . ID=id-GGE_0028-4;Dbxref=InterPro:IPR007127,PFAM:PF03979;Note=sigma70_r1_1~rna polymerase sigma factor 70%2C region 1.1;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25761 26415 . + . ID=id-GGE_0028-5;Note=Gene3D:1.10.601.10;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25770 26400 . + . ID=id-GGE_0028-6;Dbxref=InterPro:IPR013325;Note=superfamily:SSF88946~sigma2 domain of rna polymerase sigma factors~rna polymerase sigma factor%2C region 2;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25842 26034 . + . ID=id-GGE_0028-7;Dbxref=InterPro:IPR007631,PFAM:PF04546;Note=superfamily~sigma70_ner~rna polymerase sigma factor 70%2C non-essential domain%3B label: Sigma70_ner superfamily;gbkey=misc_feature;gene=rpoD;locus_tag=GGE_0028 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25434 26703 . - . ID=id-AFQR01000003.1:25434..26703;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25443 27183 . - . ID=id-AFQR01000003.1:25443..27183;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25446 27075 . - . ID=id-AFQR01000003.1:25446..27075;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25449 26631 . - . ID=id-AFQR01000003.1:25449..26631;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor~PatternScan:PS00715~sigma70_1~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25455 27138 . - . ID=id-AFQR01000003.1:25455..27138;Dbxref=InterPro:IPR000943;Note=FPrintScan:PR00046~sigma70fct~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25473 27141 . - . ID=id-AFQR01000003.1:25473..27141;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25473 26517 . - . ID=id-AFQR01000003.1:25473..26517;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25473 26412 . - . ID=id-AFQR01000003.1:25473..26412;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25479 25998 . - . ID=id-AFQR01000003.1:25479..25998;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25488 27138 . - . ID=id-AFQR01000003.1:25488..27138;Dbxref=InterPro:IPR000943;Note=PatternScan:PS00716~sigma70_2~rna polymerase sigma-70 factor;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25503 25716 . - . ID=id-AFQR01000003.1:25503..25716;Dbxref=InterPro:IPR009042,PFAM:PF00140;Note=superfamily~sigma70_r1_2~rna polymerase sigma-70 region 1.2%3B label: Sigma70_r1_2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25563 26778 . - . ID=id-AFQR01000003.1:25563..26778;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25569 27063 . - . ID=id-AFQR01000003.1:25569..27063;Dbxref=InterPro:IPR007630,PFAM:PF04545;Note=sigma70_r4~rna polymerase sigma-70 region 4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25584 27045 . - . ID=id-AFQR01000003.1:25584..27045;Note=specific~superfamily%3B label: Sigma70_r4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25614 27054 . - . ID=id-AFQR01000003.1:25614..27054;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25620 26559 . - . ID=id-AFQR01000003.1:25620..26559;Dbxref=InterPro:IPR007627,PFAM:PF04542;Note=superfamily~sigma70_r2~rna polymerase sigma-70 region 2%3B label: Sigma70_r2 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25632 26778 . - . ID=id-AFQR01000003.1:25632..26778;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma3 and sigma4 domains of rna polymerase sigma factors~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25638 26796 . - . ID=id-AFQR01000003.1:25638..26796;Dbxref=InterPro:IPR007624,PFAM:PF04539;Note=sigma70_r3~rna polymerase sigma-70 region 3;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25641 26796 . - . ID=id-AFQR01000003.1:25641..26796;Note=superfamily%3B label: Sigma70_r3 superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 25722 26949 . - . ID=id-AFQR01000003.1:25722..26949;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma3 and sigma4 domains of rna polymerase sigma factors~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 26094 26544 . - . ID=id-AFQR01000003.1:26094..26544;Dbxref=InterPro:IPR014284,TIGRFAM:TIGR02937;Note=sigma70-ecf: rna polymerase sigma factor%2C~rna polymerase sigma-70;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 26121 26547 . - . ID=id-AFQR01000003.1:26121..26547;Dbxref=InterPro:IPR012760,TIGRFAM:TIGR02393;Note=rpod_cterm: rna polymerase sigma factor r~rna polymerase sigma factor rpod;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 27365 27814 . - . ID=gene-GGE_0029;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank CDS 27365 27814 . - 0 ID=cds-EGT83328.1;Parent=gene-GGE_0029;Dbxref=GeneID:166223813,InterPro:IPR000244,InterPro:IPR009027,InterPro:IPR020069,InterPro:IPR020070,InterPro:IPR020594,PFAM:PF01281,PFAM:PF03948,TIGRFAM:TIGR00158,NCBI_GP:EGT83328.1;Name=EGT83328.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rplI;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0029;product=50S ribosomal protein L9;protein_id=EGT83328.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27365 27812 . - . ID=id-GGE_0029;Dbxref=InterPro:IPR000244,InterPro:IPR020594,TIGRFAM:TIGR00158;Note=multi-dom~HMMPanther:PTHR21368:SF20~50s ribosomal protein l9~HMMPanther:PTHR21368~family not named~ribosomal protein l9~l9: ribosomal protein l9~ribosomal protein l9%2C bacteria/chloroplast~HAMAP:MF_00503~ribosomal_l9~ribosomal protein l9%2C bacteria/chloroplast%3B label: rplI;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27365 27530 . - . ID=id-GGE_0029-2;Dbxref=InterPro:IPR009027;Note=superfamily:SSF55658~l9 n-domain-like~ribosomal protein l9/rnase h1;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27365 27521 . - . ID=id-GGE_0029-3;Dbxref=InterPro:IPR020070;Note=Gene3D:3.40.5.10~ribosomal protein l9;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27365 27509 . - . ID=id-GGE_0029-4;Dbxref=InterPro:IPR020070,PFAM:PF01281;Note=superfamily~ribosomal_l9_n~ribosomal protein l9%3B label: Ribosomal_L9_N superfamily;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27404 27449 . - . ID=id-GGE_0029-5;Dbxref=InterPro:IPR020070;Note=PatternScan:PS00651~ribosomal_l9~ribosomal protein l9;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27533 27647 . - . ID=id-GGE_0029-6;Dbxref=InterPro:IPR020069;Note=superfamily:SSF55653~ribosomal protein l9 c-domain~ribosomal protein l9;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27548 27632 . - . ID=id-GGE_0029-7;Dbxref=InterPro:IPR020069;Note=Gene3D:3.10.430.100~ribosomal protein l9;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27554 27626 . - . ID=id-GGE_0029-8;Dbxref=InterPro:IPR020069,PFAM:PF03948;Note=ribosomal_l9_c~ribosomal protein l9;gbkey=misc_feature;gene=rplI;locus_tag=GGE_0029 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27431 27476 . + . ID=id-AFQR01000003.1:27431..27476;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27446 27512 . + . ID=id-AFQR01000003.1:27446..27512;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27584 27596 . + . ID=id-AFQR01000003.1:27584..27596;Note=superfamily%3B label: Ribosomal_L9_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 27831 28058 . - . ID=gene-GGE_0030;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank CDS 27831 28058 . - 0 ID=cds-EGT83329.1;Parent=gene-GGE_0030;Dbxref=InterPro:IPR001648,InterPro:IPR018275,PFAM:PF01084,TIGRFAM:TIGR00165,NCBI_GP:EGT83329.1;Name=EGT83329.1;Ontology_term=GO:0006412,GO:0005622,GO:0005840,GO:0003735;gbkey=CDS;gene=rpsR;go_component=intracellular|0005622||,ribosome|0005840||;go_function=structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0030;product=30S ribosomal protein S18;protein_id=EGT83329.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27831 28047 . - . ID=id-GGE_0030;Note=superfamily%3B label: Ribosomal_S18 superfamily;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27837 28047 . - . ID=id-GGE_0030-2;Dbxref=InterPro:IPR001648;Note=HAMAP:MF_00270~ribosomal_s18~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27840 28047 . - . ID=id-GGE_0030-3;Dbxref=InterPro:IPR001648;Note=Gene3D:4.10.640.10~ribosomal protein s18~superfamily:SSF46911~ribosomal protein s18~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27840 28041 . - . ID=id-GGE_0030-4;Dbxref=InterPro:IPR001648;Note=HMMPanther:PTHR13479~family not named~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27843 28041 . - . ID=id-GGE_0030-5;Dbxref=InterPro:IPR001648,TIGRFAM:TIGR00165;Note=s18: ribosomal protein s18~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27879 27990 . - . ID=id-GGE_0030-6;Dbxref=InterPro:IPR001648,PFAM:PF01084;Note=ribosomal_s18~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27894 27984 . - . ID=id-GGE_0030-7;Dbxref=InterPro:IPR001648;Note=BlastProDom:PD002239~rs18_haedu_p66458~ribosomal protein s18;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27894 27903 . - . ID=id-GGE_0030-8;Dbxref=InterPro:IPR018275;Note=PatternScan:PS00057~ribosomal_s18~ribosomal protein s18%2C conserved site;gbkey=misc_feature;gene=rpsR;locus_tag=GGE_0030 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27855 27945 . + . ID=id-AFQR01000003.1:27855..27945;Dbxref=InterPro:IPR001648;Note=FPrintScan:PR00974~ribosomals18~ribosomal protein s18;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27864 28011 . + . ID=id-AFQR01000003.1:27864..28011;Dbxref=InterPro:IPR001648;Note=FPrintScan:PR00974~ribosomals18~ribosomal protein s18;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27864 27915 . + . ID=id-AFQR01000003.1:27864..27915;Dbxref=InterPro:IPR001648;Note=FPrintScan:PR00974~ribosomals18~ribosomal protein s18;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 27876 27969 . + . ID=id-AFQR01000003.1:27876..27969;Dbxref=InterPro:IPR001648;Note=FPrintScan:PR00974~ribosomals18~ribosomal protein s18;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 28071 28397 . - . ID=gene-GGE_0031;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank CDS 28071 28397 . - 0 ID=cds-EGT83330.1;Parent=gene-GGE_0031;Dbxref=GeneID:189037583,InterPro:IPR000424,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00436,NCBI_GP:EGT83330.1;Name=EGT83330.1;Ontology_term=GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||;locus_tag=GGE_0031;product=Primosomal replication protein n;protein_id=EGT83330.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28080 28389 . - . ID=id-GGE_0031;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28083 28386 . - . ID=id-GGE_0031-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28095 28374 . - . ID=id-GGE_0031-3;Dbxref=InterPro:IPR000424;Note=ProfileScan:PS50935~ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28095 28371 . - . ID=id-GGE_0031-4;Note=HAMAP:MF_00720~prib;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28101 28323 . - . ID=id-GGE_0031-5;Dbxref=InterPro:IPR000424,PFAM:PF00436;Note=ssb~primosome prib/single-strand dna-binding;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28107 28359 . - . ID=id-GGE_0031-6;Note=specific~superfamily%3B label: RPA_2b-aaRSs_OBF_like superfamily;gbkey=misc_feature;gene=priB;locus_tag=GGE_0031 GCA_000222085.2|AFQR01000003.1 Genbank gene 28384 28761 . - . ID=gene-GGE_0032;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank CDS 28384 28761 . - 0 ID=cds-EGT83331.1;Parent=gene-GGE_0032;Dbxref=GeneID:1173270,InterPro:IPR000529,InterPro:IPR014717,InterPro:IPR020814,InterPro:IPR020815,PFAM:PF01250,TIGRFAM:TIGR00166,NCBI_GP:EGT83331.1;Name=EGT83331.1;Ontology_term=GO:0006412,GO:0005840,GO:0019843,GO:0003735;gbkey=CDS;gene=rpsF;go_component=ribosome|0005840||;go_function=rRNA binding|0019843||,structural constituent of ribosome|0003735||;go_process=translation|0006412||;locus_tag=GGE_0032;product=30S ribosomal protein S6;protein_id=EGT83331.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28384 28705 . - . ID=id-GGE_0032;Note=superfamily%3B label: Ribosomal_S6 superfamily;gbkey=misc_feature;gene=rpsF;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28384 28696 . - . ID=id-GGE_0032-2;Dbxref=InterPro:IPR000529;Note=superfamily:SSF54995~ribosomal protein s6~ribosomal protein s6;gbkey=misc_feature;gene=rpsF;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28384 28690 . - . ID=id-GGE_0032-3;Dbxref=InterPro:IPR014717;Note=Gene3D:3.30.70.60~translation elongation factor ef1b/ribosomal protein s6;gbkey=misc_feature;gene=rpsF;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28384 28666 . - . ID=id-GGE_0032-4;Dbxref=InterPro:IPR000529,InterPro:IPR020814,TIGRFAM:TIGR00166;Note=HAMAP:MF_00360~ribosomal_s6~ribosomal protein s6%2C plastid/chloroplast~s6: ribosomal protein s6~ribosomal protein s6;gbkey=misc_feature;gene=rpsF;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28390 28654 . - . ID=id-GGE_0032-5;Dbxref=InterPro:IPR000529,PFAM:PF01250;Note=ribosomal_s6~ribosomal protein s6;gbkey=misc_feature;gene=rpsF;locus_tag=GGE_0032 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28414 28513 . + . ID=id-AFQR01000003.1:28414..28513;Dbxref=InterPro:IPR020815;Note=PatternScan:PS01048~ribosomal_s6~ribosomal protein s6%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 28959 29177 . - . ID=gene-GGE_0033;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank CDS 28959 29177 . - 0 ID=cds-EGT83332.1;Parent=gene-GGE_0033;Dbxref=InterPro:IPR004368,InterPro:IPR006196,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF01176,TIGRFAM:TIGR00008,NCBI_GP:EGT83332.1;Name=EGT83332.1;Ontology_term=GO:0006413,GO:0003723,GO:0003743;gbkey=CDS;gene=infA;go_function=RNA binding|0003723||,translation initiation factor activity|0003743||;go_process=translational initiation|0006413||;locus_tag=GGE_0033;product=Translation initiation factor IF-1;protein_id=EGT83332.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28959 29175 . - . ID=id-GGE_0033;Dbxref=InterPro:IPR004368,InterPro:IPR006196;Note=HAMAP:MF_00075~if_1~translation initiation factor if-1~ProfileScan:PS50832~s1_if1_type~rna-binding domain%2C s1%2C if1 type;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28959 29172 . - . ID=id-GGE_0033-2;Dbxref=InterPro:IPR016027;Note=superfamily:SSF50249~nucleic acid-binding proteins~nucleic acid-binding%2C ob-fold-like;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28959 29169 . - . ID=id-GGE_0033-3;Dbxref=InterPro:IPR012340;Note=Gene3D:2.40.50.140~nucleic acid-binding%2C ob-fold;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28968 29166 . - . ID=id-GGE_0033-4;Dbxref=InterPro:IPR004368,TIGRFAM:TIGR00008;Note=infa: translation initiation factor if-1~translation initiation factor if-1;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28977 29154 . - . ID=id-GGE_0033-5;Dbxref=InterPro:IPR006196,PFAM:PF01176;Note=eif-1a~rna-binding domain%2C s1%2C if1 type;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 28980 29151 . - . ID=id-GGE_0033-6;Note=specific~superfamily%3B label: S1_IF1;gbkey=misc_feature;gene=infA;locus_tag=GGE_0033 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29354 29363 . - . ID=id-AFQR01000003.1:29354..29363;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 29383 30246 . + . ID=gene-GGE_0034;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank CDS 29383 30246 . + 0 ID=cds-EGT83333.1;Parent=gene-GGE_0034;Dbxref=GeneID:166221670,InterPro:IPR001737,InterPro:IPR011530,InterPro:IPR020596,InterPro:IPR023165,PFAM:PF00398,TIGRFAM:TIGR00755,NCBI_GP:EGT83333.1;Name=EGT83333.1;Ontology_term=GO:0000154,GO:0006364,GO:0016433,GO:0000179,GO:0008649;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine) methyltransferase activity|0016433||,rRNA (adenine-N6 N6-)-dimethyltransferase activity|0000179||,rRNA methyltransferase activity|0008649||;go_process=rRNA modification|0000154||,rRNA processing|0006364||;locus_tag=GGE_0034;product=Ribosomal RNA small subunit methyltransferase A;protein_id=EGT83333.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29383 30202 . + . ID=id-GGE_0034;Note=superfamily%3B label: AdoMet_MTases superfamily;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29389 30208 . + . ID=id-GGE_0034-2;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29395 30223 . + . ID=id-GGE_0034-3;Dbxref=InterPro:IPR001737;Note=HMMPanther:PTHR11727~family not named~ribosomal rna adenine methylase transferase;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29407 30172 . + . ID=id-GGE_0034-4;Dbxref=InterPro:IPR011530;Note=HAMAP:MF_00607~16srrna_methyltr_a~ribosomal rna adenine dimethylase;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29410 30169 . + . ID=id-GGE_0034-5;Dbxref=InterPro:IPR001737,PFAM:PF00398;Note=rrnaad~ribosomal rna adenine methylase transferase;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29410 30166 . + . ID=id-GGE_0034-6;Dbxref=InterPro:IPR011530,TIGRFAM:TIGR00755;Note=ksga: dimethyladenosine transferase~ribosomal rna adenine dimethylase;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29434 29944 . + . ID=id-GGE_0034-7;Note=Gene3D:3.40.50.150;gbkey=misc_feature;gene=rsmA;locus_tag=GGE_0034 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29467 29506 . - . ID=id-AFQR01000003.1:29467..29506;Dbxref=InterPro:IPR020596;Note=PatternScan:PS01131~rrna_a_dimeth~ribosomal rna adenine methylase transferase%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 29581 30001 . - . ID=id-AFQR01000003.1:29581..30001;Dbxref=InterPro:IPR023165;Note=Gene3D:1.10.8.100~rrna adenine dimethylase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 30262 31089 . + . ID=gene-GGE_0035;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank CDS 30262 31089 . + 0 ID=cds-EGT83334.1;Parent=gene-GGE_0035;Dbxref=GeneID:1168467,InterPro:IPR004617,InterPro:IPR004843,PFAM:PF00149,PIR:PIRSF000903,TIGRFAM:TIGR00668,NCBI_GP:EGT83334.1;Name=EGT83334.1;Ontology_term=GO:0008803,GO:0016787;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||,hydrolase activity|0016787||;locus_tag=GGE_0035;product=putative tetraphosphatase-like protein;protein_id=EGT83334.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30262 31087 . + . ID=id-GGE_0035;Dbxref=InterPro:IPR004617,PIR:PIRSF000903,TIGRFAM:TIGR00668;Note=multi-dom~bis(5'-nucleosyl)-tetraphosphatase (symmetrical)~bis(5'-nucleosyl)-tetraphosphatase (symmetrical)~apah: bis(5'-nucleosyl)-tetraphosphatase (sy~bis(5'-nucleosyl)-tetraphosphatase (symmetrical)%3B label: apaH;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30262 31075 . + . ID=id-GGE_0035-2;Dbxref=InterPro:IPR004617;Note=HAMAP:MF_00199~apah~bis(5'-nucleosyl)-tetraphosphatase (symmetrical);gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30262 31039 . + . ID=id-GGE_0035-3;Note=superfamily:SSF56300~metallo-dependent phosphatases;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30271 31033 . + . ID=id-GGE_0035-4;Note=specific~superfamily%3B label: MPP_ApaH;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30274 30703 . + . ID=id-GGE_0035-5;Dbxref=InterPro:IPR004843,PFAM:PF00149;Note=metallophos~metallo-dependent phosphatase;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30274 30484 . + . ID=id-GGE_0035-6;Note=HMMPanther:PTHR11668:SF150~bis(5'-nucleosyl)-tetraphosphatase%2C symmetrical~HMMPanther:PTHR11668~family not named;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31057 31066 . + . ID=id-GGE_0035-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=apaH;locus_tag=GGE_0035 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 30568 30772 . - . ID=id-AFQR01000003.1:30568..30772;Note=Gene3D:3.60.21.10;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 31099 31722 . + . ID=gene-GGE_0036;Name=GGE_0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0036 GCA_000222085.2|AFQR01000003.1 Genbank CDS 31099 31722 . + 0 ID=cds-EGT83335.1;Parent=gene-GGE_0036;Dbxref=GeneID:1175260,InterPro:IPR019722,PFAM:PF10786,NCBI_GP:EGT83335.1;Name=EGT83335.1;Note=HI_0552;gbkey=CDS;locus_tag=GGE_0036;product=putative glucose-6-phosphate 1-dehydrogenase%2C bacterial;protein_id=EGT83335.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31108 31711 . + . ID=id-GGE_0036;Note=superfamily%3B label: G6PD_bact superfamily;gbkey=misc_feature;locus_tag=GGE_0036 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31111 31708 . + . ID=id-GGE_0036-2;Dbxref=InterPro:IPR019722,PFAM:PF10786;Note=g6pd_bact~glucose-6-phosphate 1-dehydrogenase%2C bacterial;gbkey=misc_feature;locus_tag=GGE_0036 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31135 31384 . - . ID=id-AFQR01000003.1:31135..31384;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31720 31729 . + . ID=id-AFQR01000003.1:31720..31729;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 31822 33156 . + . ID=gene-GGE_0037;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank CDS 31822 33156 . + 0 ID=cds-EGT83336.1;Parent=gene-GGE_0037;Dbxref=GeneID:1169333,InterPro:IPR001327,InterPro:IPR013027,PFAM:PF00070,PFAM:PF07992,NCBI_GP:EGT83336.1;Name=EGT83336.1;Ontology_term=GO:0055114,GO:0050660,GO:0016491;gbkey=CDS;gene=ndh;go_function=flavin adenine dinucleotide binding|0050660||,oxidoreductase activity|0016491||;go_process=oxidation-reduction process|0055114||;locus_tag=GGE_0037;product=NADH dehydrogenase;protein_id=EGT83336.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31822 33133 . + . ID=id-GGE_0037;Note=HMMPanther:PTHR22915:SF6~subfamily not named~HMMPanther:PTHR22915~family not named;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31822 32905 . + . ID=id-GGE_0037-2;Note=superfamily:SSF51905~fad/nad(p)-binding domain;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31822 32176 . + . ID=id-GGE_0037-3;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31831 32800 . + . ID=id-GGE_0037-4;Dbxref=InterPro:IPR013027,PFAM:PF07992;Note=pyr_redox_2~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31831 31960 . + . ID=id-GGE_0037-5;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31831 31891 . + . ID=id-GGE_0037-6;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31834 31882 . + . ID=id-GGE_0037-7;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31834 31855 . + . ID=id-GGE_0037-8;Note=seg;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31867 33079 . + . ID=id-GGE_0037-9;Note=multi-dom%3B label: Ndh;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 32356 32359 . + . ID=id-GGE_0037-10;Note=Gene3D:3.50.50.60;gbkey=misc_feature;gene=ndh;locus_tag=GGE_0037 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31846 32782 . - . ID=id-AFQR01000003.1:31846..32782;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31861 32845 . - . ID=id-AFQR01000003.1:31861..32845;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31867 32656 . - . ID=id-AFQR01000003.1:31867..32656;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31879 32368 . - . ID=id-AFQR01000003.1:31879..32368;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31891 32737 . - . ID=id-AFQR01000003.1:31891..32737;Dbxref=InterPro:IPR013027;Note=FPrintScan:PR00368~fadpnr~fad-dependent pyridine nucleotide-disulfide oxidoreductase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 31900 32368 . - . ID=id-AFQR01000003.1:31900..32368;Note=FPrintScan:PR00411~pndrdtasei;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 32074 32368 . - . ID=id-AFQR01000003.1:32074..32368;Dbxref=InterPro:IPR001327,PFAM:PF00070;Note=pyr_redox~pyridine nucleotide-disulfide oxidoreductase%2C nad-binding region;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 32116 32368 . - . ID=id-AFQR01000003.1:32116..32368;Note=superfamily%3B label: Pyr_redox superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 33168 33177 . + . ID=id-AFQR01000003.1:33168..33177;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 33186 33195 . - . ID=id-AFQR01000003.1:33186..33195;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 33200 34144 . - . ID=gene-GGE_0038;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=GGE_0038 GCA_000222085.2|AFQR01000003.1 Genbank CDS 33200 34144 . - 0 ID=cds-EGT83337.1;Parent=gene-GGE_0038;Dbxref=GeneID:1173291,InterPro:IPR005588,PFAM:PF03888,NCBI_GP:EGT83337.1;Name=EGT83337.1;gbkey=CDS;gene=rseB;locus_tag=GGE_0038;product=Sigma-E factor regulatory protein rseB;protein_id=EGT83337.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 33200 34142 . - . ID=id-GGE_0038;Dbxref=InterPro:IPR005588,PFAM:PF03888;Note=superfamily~mucb_rseb~mucb/rseb%3B label: LolA superfamily;gbkey=misc_feature;gene=rseB;locus_tag=GGE_0038 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 33230 33257 . - . ID=id-GGE_0038-2;Note=seg;gbkey=misc_feature;gene=rseB;locus_tag=GGE_0038 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34110 34119 . + . ID=id-AFQR01000003.1:34110..34119;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 34230 34817 . - . ID=gene-GGE_0039;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=GGE_0039 GCA_000222085.2|AFQR01000003.1 Genbank CDS 34230 34817 . - 0 ID=cds-EGT83338.1;Parent=gene-GGE_0039;Dbxref=InterPro:IPR005572,InterPro:IPR005573,PFAM:PF03872,PFAM:PF03873,NCBI_GP:EGT83338.1;Name=EGT83338.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||;locus_tag=GGE_0039;product=Sigma-E factor negative regulatory protein;protein_id=EGT83338.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34230 34809 . - . ID=id-GGE_0039;Note=multi-dom%3B label: RseA;gbkey=misc_feature;gene=rseA;locus_tag=GGE_0039 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34230 34494 . - . ID=id-GGE_0039-2;Note=superfamily%3B label: RseA_N superfamily;gbkey=misc_feature;gene=rseA;locus_tag=GGE_0039 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34230 34491 . - . ID=id-GGE_0039-3;Dbxref=InterPro:IPR005572,PFAM:PF03872;Note=rsea_n~anti sigma-e protein rsea;gbkey=misc_feature;gene=rseA;locus_tag=GGE_0039 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34230 34428 . - . ID=id-GGE_0039-4;Dbxref=InterPro:IPR005572;Note=superfamily:SSF89069~n-terminal%2C cytoplasmic domain of anti-sigmae factor rsea~anti sigma-e protein rsea;gbkey=misc_feature;gene=rseA;locus_tag=GGE_0039 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34275 34539 . + . ID=id-AFQR01000003.1:34275..34539;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34299 34515 . + . ID=id-AFQR01000003.1:34299..34515;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34389 34620 . + . ID=id-AFQR01000003.1:34389..34620;Dbxref=InterPro:IPR005573,PFAM:PF03873;Note=superfamily~rsea_c~anti sigma-e protein rsea%3B label: RseA_C superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 34835 35413 . - . ID=gene-GGE_0040;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank CDS 34835 35413 . - 0 ID=cds-EGT83339.1;Parent=gene-GGE_0040;Dbxref=GeneID:1173163,InterPro:IPR000838,InterPro:IPR007627,InterPro:IPR011991,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,InterPro:IPR014286,PFAM:PF04542,PFAM:PF08281,TIGRFAM:TIGR02937,TIGRFAM:TIGR02939,NCBI_GP:EGT83339.1;Name=EGT83339.1;Ontology_term=GO:0006355,GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||,sequence-specific DNA binding transcription factor activity|0003700||,sigma factor activity|0016987||;go_process=regulation of transcription DNA-dependent|0006355||,transcription initiation DNA-dependent|0006352||;locus_tag=GGE_0040;product=RNA polymerase sigma-E factor;protein_id=EGT83339.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34835 35402 . - . ID=id-GGE_0040;Dbxref=InterPro:IPR014286,TIGRFAM:TIGR02939;Note=multi-dom~rpoe_sigma70~rna polymerase sigma-70 rpoe type%3B label: RpoE_Sigma70;gbkey=misc_feature;gene=rpoE;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34835 35162 . - . ID=id-GGE_0040-2;Dbxref=InterPro:IPR013325;Note=superfamily:SSF88946~sigma_r2~rna polymerase sigma factor%2C region 2;gbkey=misc_feature;gene=rpoE;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34865 35087 . - . ID=id-GGE_0040-3;Note=Gene3D:1.10.1740.10~g3dsa:1.10.1740.10;gbkey=misc_feature;gene=rpoE;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34895 35333 . - . ID=id-GGE_0040-4;Dbxref=InterPro:IPR014284,TIGRFAM:TIGR02937;Note=sigma70-ecf~rna polymerase sigma-70;gbkey=misc_feature;gene=rpoE;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34910 35039 . - . ID=id-GGE_0040-5;Dbxref=InterPro:IPR007627,PFAM:PF04542;Note=superfamily~sigma70_r2~rna polymerase sigma-70 region 2%3B label: Sigma70_r2 superfamily;gbkey=misc_feature;gene=rpoE;locus_tag=GGE_0040 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34931 34973 . + . ID=id-AFQR01000003.1:34931..34973;Dbxref=InterPro:IPR000838;Note=PatternScan:PS01063~sigma70_ecf~rna polymerase sigma factor 70%2C ecf%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34973 35249 . + . ID=id-AFQR01000003.1:34973..35249;Dbxref=InterPro:IPR011991;Note=Gene3D:1.10.10.10~wing_hlx_dna_bd~winged helix-turn-helix transcription repressor dna-binding;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34973 35237 . + . ID=id-AFQR01000003.1:34973..35237;Dbxref=InterPro:IPR013249,PFAM:PF08281;Note=sigma70_r4_2~rna polymerase sigma factor 70%2C region 4 type 2;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 34988 35222 . + . ID=id-AFQR01000003.1:34988..35222;Note=specific~superfamily%3B label: Sigma70_r4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35048 35186 . + . ID=id-AFQR01000003.1:35048..35186;Dbxref=InterPro:IPR013324;Note=superfamily:SSF88659~sigma_r3_r4~rna polymerase sigma factor%2C region 3/4;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 35522 35845 . - . ID=gene-GGE_0041;Name=GGE_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank CDS 35522 35845 . - 0 ID=cds-EGT83340.1;Parent=gene-GGE_0041;Dbxref=InterPro:IPR005631,PFAM:PF03937,NCBI_GP:EGT83340.1;Name=EGT83340.1;Note=Hypothetical protein;gbkey=CDS;locus_tag=GGE_0041;product=Hypothetical protein;protein_id=EGT83340.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35582 35768 . - . ID=id-GGE_0041;Dbxref=InterPro:IPR005631;Note=superfamily:SSF109910~ygfy-like~protein of unknown function duf339;gbkey=misc_feature;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35591 35777 . - . ID=id-GGE_0041-2;Note=superfamily%3B label: Sdh5 superfamily;gbkey=misc_feature;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35591 35765 . - . ID=id-GGE_0041-3;Dbxref=InterPro:IPR005631;Note=Gene3D:1.10.150.250~protein of unknown function duf339;gbkey=misc_feature;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35603 35741 . - . ID=id-GGE_0041-4;Note=HMMPanther:PTHR12469:SF10~upf0350 protein ygfy~HMMPanther:PTHR12469~family not named;gbkey=misc_feature;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35621 35669 . - . ID=id-GGE_0041-5;Dbxref=InterPro:IPR005631,PFAM:PF03937;Note=sdh5~protein of unknown function duf339;gbkey=misc_feature;locus_tag=GGE_0041 GCA_000222085.2|AFQR01000003.1 Genbank gene 35874 36260 . - . ID=gene-GGE_0042;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=GGE_0042 GCA_000222085.2|AFQR01000003.1 Genbank CDS 35874 36260 . - 0 ID=cds-EGT83341.1;Parent=gene-GGE_0042;Dbxref=InterPro:IPR001185,InterPro:IPR019823,PFAM:PF01741,TIGRFAM:TIGR00220,NCBI_GP:EGT83341.1;Name=EGT83341.1;Ontology_term=GO:0006810,GO:0016021,GO:0005216;gbkey=CDS;gene=mscL;go_component=integral to membrane|0016021||;go_function=ion channel activity|0005216||;go_process=transport|0006810||;locus_tag=GGE_0042;product=Large-conductance mechanosensitive channel;protein_id=EGT83341.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35883 36252 . - . ID=id-GGE_0042;Dbxref=InterPro:IPR001185,PFAM:PF01741,TIGRFAM:TIGR00220;Note=superfamily~mscl~large-conductance mechanosensitive channel~mscl~large-conductance mechanosensitive channel%3B label: MscL superfamily;gbkey=misc_feature;gene=mscL;locus_tag=GGE_0042 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35892 35919 . - . ID=id-GGE_0042-2;Dbxref=InterPro:IPR001185;Note=FPrintScan:PR01264~mechchannel~large-conductance mechanosensitive channel;gbkey=misc_feature;gene=mscL;locus_tag=GGE_0042 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35910 36207 . - . ID=id-GGE_0042-3;Dbxref=InterPro:IPR001185;Note=superfamily:SSF81330~ms_channel~large-conductance mechanosensitive channel;gbkey=misc_feature;gene=mscL;locus_tag=GGE_0042 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35913 35916 . - . ID=id-GGE_0042-4;Dbxref=InterPro:IPR019823;Note=PatternScan:PS01327~mscl~large-conductance mechanosensitive channel%2C conserved site;gbkey=misc_feature;gene=mscL;locus_tag=GGE_0042 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35901 36126 . + . ID=id-AFQR01000003.1:35901..36126;Dbxref=InterPro:IPR001185;Note=FPrintScan:PR01264~mechchannel~large-conductance mechanosensitive channel;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 35904 36153 . + . ID=id-AFQR01000003.1:35904..36153;Dbxref=InterPro:IPR001185;Note=FPrintScan:PR01264~mechchannel~large-conductance mechanosensitive channel;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 36334 37710 . - . ID=gene-GGE_0043;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank CDS 36334 37710 . - 0 ID=cds-EGT83342.1;Parent=gene-GGE_0043;Dbxref=GeneID:7388324,InterPro:IPR003148,InterPro:IPR006036,InterPro:IPR006037,InterPro:IPR016040,PFAM:PF02080,PFAM:PF02254,NCBI_GP:EGT83342.1;Name=EGT83342.1;Ontology_term=GO:0008152,GO:0006813,GO:0005488,GO:0003824,GO:0008324;gbkey=CDS;gene=trkA;go_function=binding|0005488||,catalytic activity|0003824||,cation transmembrane transporter activity|0008324||;go_process=metabolic process|0008152||,potassium ion transport|0006813||;locus_tag=GGE_0043;product=Trk system potassium uptake protein trkA;protein_id=EGT83342.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36334 37702 . - . ID=id-GGE_0043;Note=multi-dom%3B label: trkA;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36334 37654 . - . ID=id-GGE_0043-2;Note=HMMPanther:PTHR13789:SF95~potassium uptake protein trka~HMMPanther:PTHR13789~family not named;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36334 36793 . - . ID=id-GGE_0043-3;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36334 36787 . - . ID=id-GGE_0043-4;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36340 36724 . - . ID=id-GGE_0043-5;Dbxref=InterPro:IPR003148;Note=ProfileScan:PS51201~rck_n~regulator of k+ conductance;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36340 36379 . - . ID=id-GGE_0043-6;Dbxref=InterPro:IPR006036;Note=FPrintScan:PR00335~kuptaketrka~potassium uptake protein trka;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36343 36703 . - . ID=id-GGE_0043-7;Dbxref=InterPro:IPR003148,PFAM:PF02254;Note=superfamily~trka_n~regulator of k+ conductance%3B label: NADB_Rossmann superfamily;gbkey=misc_feature;gene=trkA;locus_tag=GGE_0043 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36367 37048 . + . ID=id-AFQR01000003.1:36367..37048;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36367 36514 . + . ID=id-AFQR01000003.1:36367..36514;Dbxref=InterPro:IPR006036;Note=FPrintScan:PR00335~kuptaketrka~potassium uptake protein trka;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36367 36481 . + . ID=id-AFQR01000003.1:36367..36481;Dbxref=InterPro:IPR006036;Note=FPrintScan:PR00335~kuptaketrka~potassium uptake protein trka;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36370 37279 . + . ID=id-AFQR01000003.1:36370..37279;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36379 36553 . + . ID=id-AFQR01000003.1:36379..36553;Dbxref=InterPro:IPR006036;Note=FPrintScan:PR00335~kuptaketrka~potassium uptake protein trka;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36379 36391 . + . ID=id-AFQR01000003.1:36379..36391;Dbxref=InterPro:IPR006036;Note=FPrintScan:PR00335~kuptaketrka~potassium uptake protein trka;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36520 37504 . + . ID=id-AFQR01000003.1:36520..37504;Dbxref=InterPro:IPR006037,PFAM:PF02080;Note=trka_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36526 37501 . + . ID=id-AFQR01000003.1:36526..37501;Note=superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36544 36802 . + . ID=id-AFQR01000003.1:36544..36802;Dbxref=InterPro:IPR006037,PFAM:PF02080;Note=trka_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36550 36799 . + . ID=id-AFQR01000003.1:36550..36799;Note=superfamily%3B label: ArsB_NhaD_permease superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36589 36763 . + . ID=id-AFQR01000003.1:36589..36763;Dbxref=InterPro:IPR006037;Note=ProfileScan:PS51202~rck_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36592 37438 . + . ID=id-AFQR01000003.1:36592..37438;Dbxref=InterPro:IPR006037;Note=ProfileScan:PS51202~rck_c~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36613 36739 . + . ID=id-AFQR01000003.1:36613..36739;Note=superfamily:SSF116726~trka c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36616 37414 . + . ID=id-AFQR01000003.1:36616..37414;Note=superfamily:SSF116726~trka c-terminal domain-like;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36634 37087 . + . ID=id-AFQR01000003.1:36634..37087;Note=superfamily%3B label: NADB_Rossmann superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36682 37039 . + . ID=id-AFQR01000003.1:36682..37039;Dbxref=InterPro:IPR003148,PFAM:PF02254;Note=trka_n~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36697 37036 . + . ID=id-AFQR01000003.1:36697..37036;Dbxref=InterPro:IPR003148;Note=ProfileScan:PS51201~rck_n~regulator of k+ conductance;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36766 37033 . + . ID=id-AFQR01000003.1:36766..37033;Dbxref=InterPro:IPR016040;Note=Gene3D:3.40.50.720~nad(p)-binding domain;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 36781 37024 . + . ID=id-AFQR01000003.1:36781..37024;Note=superfamily:SSF51735~nad(p)-binding rossmann-fold domains;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 37714 38517 . - . ID=gene-GGE_0044;Name=GGE_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank CDS 37714 38517 . - 0 ID=cds-EGT83343.1;Parent=gene-GGE_0044;Dbxref=GeneID:325577102,InterPro:IPR001173,PFAM:PF00535,NCBI_GP:EGT83343.1;Name=EGT83343.1;Note=ZP_08147586;gbkey=CDS;locus_tag=GGE_0044;product=putative glycosyl transferase%2C family 2;protein_id=EGT83343.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 37726 38335 . - . ID=id-GGE_0044;Note=superfamily:SSF53448~nucleotide-diphospho-sugar transferases;gbkey=misc_feature;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 37729 38248 . - . ID=id-GGE_0044-2;Note=Gene3D:3.90.550.10;gbkey=misc_feature;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 37729 38233 . - . ID=id-GGE_0044-3;Note=HMMPanther:PTHR22916~family not named;gbkey=misc_feature;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 37732 38050 . - . ID=id-GGE_0044-4;Dbxref=InterPro:IPR001173,PFAM:PF00535;Note=glycos_transf_2~glycosyl transferase%2C family 2;gbkey=misc_feature;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 37735 38206 . - . ID=id-GGE_0044-5;Note=specific~superfamily%3B label: Glyco_tranf_GTA_type;gbkey=misc_feature;locus_tag=GGE_0044 GCA_000222085.2|AFQR01000003.1 Genbank gene 38526 39878 . - . ID=gene-GGE_0045;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank CDS 38526 39878 . - 0 ID=cds-EGT83344.1;Parent=gene-GGE_0045;Dbxref=GeneID:1169716,InterPro:IPR001678,InterPro:IPR004573,InterPro:IPR006027,InterPro:IPR018314,InterPro:IPR023267,PFAM:PF01029,PFAM:PF01189,TIGRFAM:TIGR00563,NCBI_GP:EGT83344.1;Name=EGT83344.1;Ontology_term=GO:0006364,GO:0006355,GO:0003723,GO:0008168,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||,methyltransferase activity|0008168||,rRNA methyltransferase activity|0008649||;go_process=rRNA processing|0006364||,regulation of transcription DNA-dependent|0006355||;locus_tag=GGE_0045;product=Ribosomal RNA small subunit methyltransferase B;protein_id=EGT83344.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38580 38961 . - . ID=id-GGE_0045;Dbxref=InterPro:IPR006027;Note=Gene3D:1.10.940.10~nusb/rsmb/tim44;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38583 39816 . - . ID=id-GGE_0045-2;Note=multi-dom%3B label: PRK10901;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38586 38958 . - . ID=id-GGE_0045-3;Dbxref=InterPro:IPR006027;Note=superfamily:SSF48013~nusb-like~nusb/rsmb/tim44;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38586 38901 . - . ID=id-GGE_0045-4;Note=specific~superfamily%3B label: Methyltransferase_Sun;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38589 38892 . - . ID=id-GGE_0045-5;Dbxref=InterPro:IPR006027,PFAM:PF01029;Note=nusb~nusb/rsmb/tim44;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38595 39810 . - . ID=id-GGE_0045-6;Dbxref=InterPro:IPR004573,TIGRFAM:TIGR00563;Note=rsmb: ribosomal rna small subunit methyltran~rrna small subunit methyltransferase b;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38598 38607 . - . ID=id-GGE_0045-7;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38688 39711 . - . ID=id-GGE_0045-8;Note=HMMPanther:PTHR22807:SF12~ribosomal rna small subunit methyltransferase b (sun)~HMMPanther:PTHR22807~family not named;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38886 38895 . - . ID=id-GGE_0045-9;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39003 39399 . - . ID=id-GGE_0045-10;Note=superfamily:SSF53335~s-adenosyl-l-methionine-dependent methyltransferase;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39057 39339 . - . ID=id-GGE_0045-11;Dbxref=InterPro:IPR001678,PFAM:PF01189;Note=nol1_nop2_fmu~bacterial fmu (sun)/eukaryotic nucleolar nol1/nop2p;gbkey=misc_feature;gene=rsmB;locus_tag=GGE_0045 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38556 38811 . + . ID=id-AFQR01000003.1:38556..38811;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38559 39315 . + . ID=id-AFQR01000003.1:38559..39315;Dbxref=InterPro:IPR023267;Note=FPrintScan:PR02008~rcmtfamily~rna (c5-cytosine) methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38562 39525 . + . ID=id-AFQR01000003.1:38562..39525;Dbxref=InterPro:IPR018314;Note=PatternScan:PS01153~nol1_nop2_sun~bacterial fmu (sun)/eukaryotic nucleolar nol1/nop2p%2C conserved site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38565 39528 . + . ID=id-AFQR01000003.1:38565..39528;Dbxref=InterPro:IPR023267;Note=FPrintScan:PR02008~rcmtfamily~rna (c5-cytosine) methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38571 39228 . + . ID=id-AFQR01000003.1:38571..39228;Dbxref=InterPro:IPR023267;Note=FPrintScan:PR02008~rcmtfamily~rna (c5-cytosine) methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38577 39678 . + . ID=id-AFQR01000003.1:38577..39678;Dbxref=InterPro:IPR023267;Note=FPrintScan:PR02008~rcmtfamily~rna (c5-cytosine) methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38580 39819 . + . ID=id-AFQR01000003.1:38580..39819;Dbxref=InterPro:IPR023267;Note=FPrintScan:PR02008~rcmtfamily~rna (c5-cytosine) methyltransferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38592 39390 . + . ID=id-AFQR01000003.1:38592..39390;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38595 39015 . + . ID=id-AFQR01000003.1:38595..39015;Note=Gene3D:1.10.287.730;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38697 39084 . + . ID=id-AFQR01000003.1:38697..39084;Note=Gene3D:3.30.70.1170;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 38910 39312 . + . ID=id-AFQR01000003.1:38910..39312;Note=specific~superfamily%3B label: AdoMet_MTases;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39144 39255 . + . ID=id-AFQR01000003.1:39144..39255;Note=Gene3D:3.40.50.150;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39173 39182 . + . ID=id-AFQR01000003.1:39173..39182;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39267 39276 . + . ID=id-AFQR01000003.1:39267..39276;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39817 39826 . + . ID=id-AFQR01000003.1:39817..39826;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 39878 40834 . - . ID=gene-GGE_0046;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank CDS 39878 40834 . - 0 ID=cds-EGT83345.1;Parent=gene-GGE_0046;Dbxref=GeneID:81336406,InterPro:IPR001555,InterPro:IPR002376,InterPro:IPR005793,InterPro:IPR005794,InterPro:IPR011034,InterPro:IPR015518,PFAM:PF00551,PFAM:PF02911,TIGRFAM:TIGR00460,NCBI_GP:EGT83345.1;Name=EGT83345.1;Ontology_term=GO:0009058,GO:0006412,GO:0003824,GO:0016742,GO:0004479,GO:0008168;gbkey=CDS;gene=fmt;go_function=catalytic activity|0003824||,hydroxymethyl- formyl- and related transferase activity|0016742||,methionyl-tRNA formyltransferase activity|0004479||,methyltransferase activity|0008168||;go_process=biosynthetic process|0009058||,translation|0006412||;locus_tag=GGE_0046;product=Methionyl-tRNA formyltransferase;protein_id=EGT83345.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39878 40496 . - . ID=id-GGE_0046;Dbxref=InterPro:IPR002376;Note=superfamily:SSF53328~formyltransferase~formyl transferase;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39878 40427 . - . ID=id-GGE_0046-2;Dbxref=InterPro:IPR002376,PFAM:PF00551;Note=formyl_trans_n~formyl transferase;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39887 40496 . - . ID=id-GGE_0046-3;Dbxref=InterPro:IPR002376;Note=Gene3D:3.40.50.170~formyl transferase;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39890 40823 . - . ID=id-GGE_0046-4;Note=multi-dom%3B label: fmt;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39890 40820 . - . ID=id-GGE_0046-5;Dbxref=InterPro:IPR005794,TIGRFAM:TIGR00460;Note=fmt: methionyl-trna formyltransferase~methionyl-trna formyltransferase;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39890 40799 . - . ID=id-GGE_0046-6;Dbxref=InterPro:IPR005794;Note=HAMAP:MF_00182~formyl_trans~methionyl-trna formyltransferase;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39890 40790 . - . ID=id-GGE_0046-7;Dbxref=InterPro:IPR015518;Note=HMMPanther:PTHR11138~family not named~methionine trna formyltransferase-like;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39890 40490 . - . ID=id-GGE_0046-8;Note=specific~superfamily%3B label: FMT_core superfamily;gbkey=misc_feature;gene=fmt;locus_tag=GGE_0046 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 39950 40283 . + . ID=id-AFQR01000003.1:39950..40283;Dbxref=InterPro:IPR001555;Note=PatternScan:PS00373~gart~phosphoribosylglycinamide formyltransferase%2C active site;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40151 40508 . + . ID=id-AFQR01000003.1:40151..40508;Note=specific~superfamily%3B label: FMT_C_like superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40184 40496 . + . ID=id-AFQR01000003.1:40184..40496;Dbxref=InterPro:IPR005793,PFAM:PF02911;Note=formyl_trans_c~formyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40199 40505 . + . ID=id-AFQR01000003.1:40199..40505;Dbxref=InterPro:IPR005793;Note=Gene3D:3.10.25.10~formyl transferase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40202 40499 . + . ID=id-AFQR01000003.1:40202..40499;Dbxref=InterPro:IPR011034;Note=superfamily:SSF50486~fmt c-terminal domain-like~formyl transferase-like;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40882 40891 . - . ID=id-AFQR01000003.1:40882..40891;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank gene 40910 41419 . - . ID=gene-GGE_0047;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank CDS 40910 41419 . - 0 ID=cds-EGT83346.1;Parent=gene-GGE_0047;Dbxref=GeneID:166198518,InterPro:IPR000181,PFAM:PF01327,PIR:PIRSF004749,TIGRFAM:TIGR00079,NCBI_GP:EGT83346.1;Name=EGT83346.1;Ontology_term=GO:0006412,GO:0005506,GO:0042586;gbkey=CDS;gene=def;go_function=iron ion binding|0005506||,peptide deformylase activity|0042586||;go_process=translation|0006412||;locus_tag=GGE_0047;product=Peptide deformylase;protein_id=EGT83346.1;transl_table=11 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40910 41408 . - . ID=id-GGE_0047;Dbxref=InterPro:IPR000181,PIR:PIRSF004749;Note=peptide deformylase~formylmethionine deformylase~Gene3D:3.90.45.10~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40910 41402 . - . ID=id-GGE_0047-2;Dbxref=InterPro:IPR000181;Note=HMMPanther:PTHR10458~peptide deformylase~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40916 41408 . - . ID=id-GGE_0047-3;Dbxref=InterPro:IPR000181;Note=superfamily:SSF56420~peptide deformylase~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40916 41393 . - . ID=id-GGE_0047-4;Dbxref=InterPro:IPR000181;Note=HAMAP:MF_00163~pep_deformylase~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40919 41387 . - . ID=id-GGE_0047-5;Dbxref=InterPro:IPR000181,TIGRFAM:TIGR00079;Note=pept_deformyl: peptide deformylase~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40922 41357 . - . ID=id-GGE_0047-6;Dbxref=InterPro:IPR000181,PFAM:PF01327;Note=pep_deformylase~formylmethionine deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40928 41324 . - . ID=id-GGE_0047-7;Note=specific~superfamily%3B label: Pep_deformylase;gbkey=misc_feature;gene=def;locus_tag=GGE_0047 GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40946 41177 . + . ID=id-AFQR01000003.1:40946..41177;Dbxref=InterPro:IPR000181;Note=FPrintScan:PR01576~pdeformylase~formylmethionine deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 40967 41213 . + . ID=id-AFQR01000003.1:40967..41213;Dbxref=InterPro:IPR000181;Note=FPrintScan:PR01576~pdeformylase~formylmethionine deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 41000 41270 . + . ID=id-AFQR01000003.1:41000..41270;Dbxref=InterPro:IPR000181;Note=FPrintScan:PR01576~pdeformylase~formylmethionine deformylase;gbkey=misc_feature GCA_000222085.2|AFQR01000003.1 Genbank sequence_feature 41000 41009 . + . ID=id-AFQR01000003.1:41000..41009;Dbxref=InterPro:IPR000181;Note=FPrintScan:PR01576~pdeformylase~formylmethionine deformylase;gbkey=misc_feature ##sequence-region AFQR01000002.1 1 1106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000002.1 Genbank region 1 1106 . + . ID=AFQR01000002.1:1..1106;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 ##sequence-region AFQR01000001.1 1 11956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1028806 GCA_000222085.2|AFQR01000001.1 Genbank region 1 11956 . + . ID=AFQR01000001.1:1..11956;Dbxref=taxon:1028806;country=USA: Illinois;gbkey=Src;isolation-source=blood;mol_type=genomic DNA;nat-host=Homo sapiens;strain=M21639 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 414 840 . + . ID=id-AFQR01000001.1:414..840;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 420 453 . + . ID=id-AFQR01000001.1:420..453;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 453 777 . - . ID=id-AFQR01000001.1:453..777;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 462 711 . - . ID=id-AFQR01000001.1:462..711;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 1212 . - . ID=id-AFQR01000001.1:477..1212;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 1125 . - . ID=id-AFQR01000001.1:477..1125;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 1029 . - . ID=id-AFQR01000001.1:477..1029;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 942 . - . ID=id-AFQR01000001.1:477..942;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 846 . - . ID=id-AFQR01000001.1:477..846;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 609 . - . ID=id-AFQR01000001.1:477..609;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 477 483 . - . ID=id-AFQR01000001.1:477..483;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 720 963 . - . ID=id-AFQR01000001.1:720..963;Note=superfamily:SSF103481~multidrug resistance efflux transporter emre;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 837 846 . + . ID=id-AFQR01000001.1:837..846;Note=Haemophilus USS 10bp intact;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 1296 2717 . + . ID=gene-GGE_0001;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank CDS 1296 2717 . + 0 ID=cds-EGT83347.1;Parent=gene-GGE_0001;Dbxref=GeneID:1169569,InterPro:IPR012337,InterPro:IPR013520,InterPro:IPR013620,PFAM:PF00929,PFAM:PF08411,NCBI_GP:EGT83347.1;Name=EGT83347.1;Ontology_term=GO:0006281,GO:0008852,GO:0003676;gbkey=CDS;gene=sbcB;go_function=exodeoxyribonuclease I activity|0008852||,nucleic acid binding|0003676||;go_process=DNA repair|0006281||;locus_tag=GGE_0001;product=Exodeoxyribonuclease I;protein_id=EGT83347.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1296 2715 . + . ID=id-GGE_0001;Note=multi-dom%3B label: sbcB;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1302 1884 . + . ID=id-GGE_0001-2;Note=Gene3D:3.30.420.10;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1311 2700 . + . ID=id-GGE_0001-3;Dbxref=InterPro:IPR012337;Note=superfamily:SSF53098~ribonuclease h-like~ribonuclease h-like;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1317 1842 . + . ID=id-GGE_0001-4;Dbxref=InterPro:IPR013520,PFAM:PF00929;Note=exonuc_x-t~exonuclease%2C rnase t/dna polymerase iii;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1320 1848 . + . ID=id-GGE_0001-5;Note=specific~superfamily%3B label: DnaQ_like_exo superfamily;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1920 2088 . + . ID=id-GGE_0001-6;Note=superfamily%3B label: Exonuc_X-T_C superfamily;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1920 2082 . + . ID=id-GGE_0001-7;Dbxref=InterPro:IPR013620,PFAM:PF08411;Note=exonuc_x-t_c~exonuclease c-terminal;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 2598 2607 . + . ID=id-GGE_0001-8;Note=Haemophilus USS 10bp intact;gbkey=misc_feature;gene=sbcB;locus_tag=GGE_0001 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 1362 2586 . - . ID=id-AFQR01000001.1:1362..2586;Note=coiled-coil;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 3135 3428 . + . ID=gene-GGE_0002;Name=GGE_0002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0002 GCA_000222085.2|AFQR01000001.1 Genbank CDS 3135 3428 . + 0 ID=cds-EGT83348.1;Parent=gene-GGE_0002;Dbxref=GeneID:148826848,NCBI_GP:EGT83348.1;Name=EGT83348.1;Note=YP_001291601~CGSHiGG_00590;gbkey=CDS;locus_tag=GGE_0002;product=Hypothetical protein;protein_id=EGT83348.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank gene 4636 5790 . + . ID=gene-GGE_0003;Name=GGE_0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0003 GCA_000222085.2|AFQR01000001.1 Genbank CDS 4636 5790 . + 0 ID=cds-EGT83349.1;Parent=gene-GGE_0003;Dbxref=GeneID:148826852,InterPro:IPR022686,InterPro:IPR022688,PFAM:PF05144,PFAM:PF05155,NCBI_GP:EGT83349.1;Name=EGT83349.1;Note=YP_001291605;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||;locus_tag=GGE_0003;product=putative phage/plasmid replication protein;protein_id=EGT83349.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 4651 5746 . + . ID=id-GGE_0003;Note=multi-dom%3B label: rep_II_X;gbkey=misc_feature;locus_tag=GGE_0003 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 4651 5383 . + . ID=id-GGE_0003-2;Note=superfamily%3B label: Phage_CRI superfamily;gbkey=misc_feature;locus_tag=GGE_0003 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 4837 5191 . + . ID=id-GGE_0003-3;Dbxref=InterPro:IPR022686,PFAM:PF05144;Note=phage_cri~phage/plasmid replication protein%2C gene ii/x;gbkey=misc_feature;locus_tag=GGE_0003 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 4900 5503 . - . ID=id-AFQR01000001.1:4900..5503;Dbxref=InterPro:IPR022688,PFAM:PF05155;Note=phage_x~phage/plasmid replication protein%2C gene ii/x;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 4909 5503 . - . ID=id-AFQR01000001.1:4909..5503;Note=superfamily%3B label: Phage_X superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 5830 6159 . + . ID=gene-GGE_0004;Name=GGE_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0004 GCA_000222085.2|AFQR01000001.1 Genbank CDS 5830 6159 . + 0 ID=cds-EGT83350.1;Parent=gene-GGE_0004;Dbxref=GeneID:148826853,NCBI_GP:EGT83350.1;Name=EGT83350.1;Note=YP_001291606;gbkey=CDS;locus_tag=GGE_0004;product=Hypothetical protein;protein_id=EGT83350.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 5842 6145 . + . ID=id-GGE_0004;Note=BlastProDom:PD071248~q7tt99_haedu_q7tt99;gbkey=misc_feature;locus_tag=GGE_0004 GCA_000222085.2|AFQR01000001.1 Genbank gene 6156 6422 . + . ID=gene-GGE_0005;Name=GGE_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0005 GCA_000222085.2|AFQR01000001.1 Genbank CDS 6156 6422 . + 0 ID=cds-EGT83351.1;Parent=gene-GGE_0005;Dbxref=GeneID:148826855,NCBI_GP:EGT83351.1;Name=EGT83351.1;Note=YP_001291608~CGSHiGG_00625;gbkey=CDS;locus_tag=GGE_0005;product=Hypothetical protein;protein_id=EGT83351.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6225 6351 . - . ID=id-AFQR01000001.1:6225..6351;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 6734 8377 . + . ID=gene-GGE_0006;Name=GGE_0006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0006 GCA_000222085.2|AFQR01000001.1 Genbank CDS 6734 8377 . + 0 ID=cds-EGT83352.1;Parent=gene-GGE_0006;Dbxref=GeneID:257465730,NCBI_GP:EGT83352.1;Name=EGT83352.1;Note=ZP_05630101~AM202_04397;gbkey=CDS;locus_tag=GGE_0006;product=Hypothetical protein;protein_id=EGT83352.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6776 6794 . - . ID=id-AFQR01000001.1:6776..6794;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6779 7823 . - . ID=id-AFQR01000001.1:6779..7823;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6785 8039 . - . ID=id-AFQR01000001.1:6785..8039;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6794 8312 . - . ID=id-AFQR01000001.1:6794..8312;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 6821 6902 . - . ID=id-AFQR01000001.1:6821..6902;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 8387 8680 . + . ID=gene-GGE_0007;Name=GGE_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0007 GCA_000222085.2|AFQR01000001.1 Genbank CDS 8387 8680 . + 0 ID=cds-EGT83353.1;Parent=gene-GGE_0007;Dbxref=GeneID:257465731,NCBI_GP:EGT83353.1;Name=EGT83353.1;Note=ZP_05630102;gbkey=CDS;locus_tag=GGE_0007;product=putative phage-related membrane protein;protein_id=EGT83353.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8447 8456 . + . ID=id-GGE_0007;Note=transmembrane_regions;gbkey=misc_feature;locus_tag=GGE_0007 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8432 8459 . - . ID=id-AFQR01000001.1:8432..8459;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8456 8579 . - . ID=id-AFQR01000001.1:8456..8579;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank gene 8689 9732 . + . ID=gene-GGE_0008;Name=GGE_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0008 GCA_000222085.2|AFQR01000001.1 Genbank CDS 8689 9732 . + 0 ID=cds-EGT83354.1;Parent=gene-GGE_0008;Dbxref=GeneID:257465732,InterPro:IPR008900,PFAM:PF05707,NCBI_GP:EGT83354.1;Name=EGT83354.1;Note=ZP_05630103;gbkey=CDS;locus_tag=GGE_0008;product=putative phage-related membrane protein;protein_id=EGT83354.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8689 9703 . + . ID=id-GGE_0008;Note=superfamily%3B label: Zot superfamily;gbkey=misc_feature;locus_tag=GGE_0008 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8689 9316 . + . ID=id-GGE_0008-2;Note=Gene3D:3.40.50.300;gbkey=misc_feature;locus_tag=GGE_0008 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 8695 9313 . + . ID=id-GGE_0008-3;Dbxref=InterPro:IPR008900,PFAM:PF05707;Note=zot~zona occludens toxin;gbkey=misc_feature;locus_tag=GGE_0008 GCA_000222085.2|AFQR01000001.1 Genbank gene 9729 10865 . + . ID=gene-GGE_0009;Name=GGE_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=GGE_0009 GCA_000222085.2|AFQR01000001.1 Genbank CDS 9729 10865 . + 0 ID=cds-EGT83355.1;Parent=gene-GGE_0009;Dbxref=GeneID:257465733,InterPro:IPR004846,PFAM:PF00263,NCBI_GP:EGT83355.1;Name=EGT83355.1;Note=ZP_05630104;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||;locus_tag=GGE_0009;product=putative phage-related secreted protein;protein_id=EGT83355.1;transl_table=11 GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 9783 10281 . - . ID=id-AFQR01000001.1:9783..10281;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 10173 10407 . - . ID=id-AFQR01000001.1:10173..10407;Note=superfamily%3B label: Secretin superfamily;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 10182 10407 . - . ID=id-AFQR01000001.1:10182..10407;Dbxref=InterPro:IPR004846,PFAM:PF00263;Note=secretin~type ii/iii secretion system;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 11444 11606 . + . ID=id-AFQR01000001.1:11444..11606;Note=seg;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 11465 11603 . + . ID=id-AFQR01000001.1:11465..11603;Note=transmembrane_regions;gbkey=misc_feature GCA_000222085.2|AFQR01000001.1 Genbank sequence_feature 11465 11492 . + . ID=id-AFQR01000001.1:11465..11492;Note=transmembrane_regions;gbkey=misc_feature ###