##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM164883v1 #!genome-build-accession NCBI_Assembly:GCA_001648835.1 #!annotation-date 06/02/2016 13:35:26 #!annotation-source NCBI ##sequence-region LVXE01000001.1 1 257291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000001.1 Genbank region 1 257291 . + . ID=LVXE01000001.1:1..257291;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 1 259 . - . ID=gene-A3216_00005;Name=A3216_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00005;pseudo=true GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 1 259 . - 0 ID=cds-A3216_00005;Parent=gene-A3216_00005;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00005;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 231 632 . - . ID=gene-A3216_00010;Name=A3216_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00010 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 231 632 . - 0 ID=cds-OAX72186.1;Parent=gene-A3216_00010;Dbxref=NCBI_GP:OAX72186.1;Name=OAX72186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00010;product=hypothetical protein;protein_id=OAX72186.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 683 880 . - . ID=gene-A3216_00015;Name=A3216_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00015 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 683 880 . - 0 ID=cds-OAX72187.1;Parent=gene-A3216_00015;Dbxref=NCBI_GP:OAX72187.1;Name=OAX72187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00015;product=hypothetical protein;protein_id=OAX72187.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 893 1084 . - . ID=gene-A3216_00020;Name=A3216_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00020 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 893 1084 . - 0 ID=cds-OAX72188.1;Parent=gene-A3216_00020;Dbxref=NCBI_GP:OAX72188.1;Name=OAX72188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00020;product=hypothetical protein;protein_id=OAX72188.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 1546 2008 . - . ID=gene-A3216_00025;Name=A3216_00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00025;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 1546 2008 . - 0 ID=cds-A3216_00025;Parent=gene-A3216_00025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020725702.1;locus_tag=A3216_00025;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 2160 3761 . + . ID=gene-A3216_00030;Name=A3216_00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00030;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 2160 3761 . + 0 ID=cds-A3216_00030;Parent=gene-A3216_00030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628373.1;locus_tag=A3216_00030;product=flavoprotein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 3758 4729 . + . ID=gene-A3216_00035;Name=A3216_00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00035;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 3758 4729 . + 0 ID=cds-A3216_00035;Parent=gene-A3216_00035;Note=involved in the biosynthesis of phosphatidylinositol mannosides (PIMs)%3B the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379915.1;locus_tag=A3216_00035;product=diacylglycerol kinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 4710 5222 . - . ID=gene-A3216_00040;Name=A3216_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00040 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 4710 5222 . - 0 ID=cds-OAX72189.1;Parent=gene-A3216_00040;Dbxref=NCBI_GP:OAX72189.1;Name=OAX72189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015307824.1;locus_tag=A3216_00040;product=hypothetical protein;protein_id=OAX72189.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 5361 6182 . - . ID=gene-A3216_00045;Name=A3216_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00045 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 5361 6182 . - 0 ID=cds-OAX72190.1;Parent=gene-A3216_00045;Dbxref=NCBI_GP:OAX72190.1;Name=OAX72190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908532.1;locus_tag=A3216_00045;product=serine hydrolase;protein_id=OAX72190.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 6182 7150 . - . ID=gene-A3216_00050;Name=A3216_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00050 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 6182 7150 . - 0 ID=cds-OAX72191.1;Parent=gene-A3216_00050;Dbxref=NCBI_GP:OAX72191.1;Name=OAX72191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908533.1;locus_tag=A3216_00050;product=methyltransferase;protein_id=OAX72191.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 7312 8397 . + . ID=gene-A3216_00055;Name=A3216_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00055 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 7312 8397 . + 0 ID=cds-OAX72351.1;Parent=gene-A3216_00055;Dbxref=NCBI_GP:OAX72351.1;Name=OAX72351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019249967.1;locus_tag=A3216_00055;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=OAX72351.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 9926 10348 . - . ID=gene-A3216_00060;Name=A3216_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00060 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 9926 10348 . - 0 ID=cds-OAX72192.1;Parent=gene-A3216_00060;Dbxref=NCBI_GP:OAX72192.1;Name=OAX72192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00060;product=hypothetical protein;protein_id=OAX72192.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 10704 11804 . - . ID=gene-A3216_00065;Name=A3216_00065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00065;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 10704 11804 . - 0 ID=cds-A3216_00065;Parent=gene-A3216_00065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003921071.1;locus_tag=A3216_00065;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 12202 12408 . + . ID=gene-A3216_00070;Name=A3216_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00070 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 12202 12408 . + 0 ID=cds-OAX72193.1;Parent=gene-A3216_00070;Dbxref=NCBI_GP:OAX72193.1;Name=OAX72193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00070;product=hypothetical protein;protein_id=OAX72193.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 13378 14016 . + . ID=gene-A3216_00075;Name=A3216_00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00075;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 13378 14016 . + 0 ID=cds-A3216_00075;Parent=gene-A3216_00075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003918437.1;locus_tag=A3216_00075;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 14523 14756 . + . ID=gene-A3216_00080;Name=A3216_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00080 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 14523 14756 . + 0 ID=cds-OAX72194.1;Parent=gene-A3216_00080;Dbxref=NCBI_GP:OAX72194.1;Name=OAX72194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00080;product=hypothetical protein;protein_id=OAX72194.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 14824 15039 . + . ID=gene-A3216_00085;Name=A3216_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00085 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 14824 15039 . + 0 ID=cds-OAX72195.1;Parent=gene-A3216_00085;Dbxref=NCBI_GP:OAX72195.1;Name=OAX72195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00085;product=hypothetical protein;protein_id=OAX72195.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 15280 16251 . + . ID=gene-A3216_00090;Name=A3216_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00090 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 15280 16251 . + 0 ID=cds-OAX72352.1;Parent=gene-A3216_00090;Dbxref=NCBI_GP:OAX72352.1;Name=OAX72352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009976037.1;locus_tag=A3216_00090;product=DNA polymerase III subunit delta;protein_id=OAX72352.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 16288 16548 . - . ID=gene-A3216_00095;Name=A3216_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00095 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 16288 16548 . - 0 ID=cds-OAX72196.1;Parent=gene-A3216_00095;Dbxref=NCBI_GP:OAX72196.1;Name=OAX72196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019738430.1;locus_tag=A3216_00095;product=30S ribosomal protein S20;protein_id=OAX72196.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 16683 18369 . + . ID=gene-A3216_00100;Name=A3216_00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00100;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 16683 18369 . + 0 ID=cds-A3216_00100;Parent=gene-A3216_00100;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49755.2;locus_tag=A3216_00100;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 18369 19346 . + . ID=gene-A3216_00105;Name=A3216_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00105 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 18369 19346 . + 0 ID=cds-OAX72197.1;Parent=gene-A3216_00105;Dbxref=NCBI_GP:OAX72197.1;Name=OAX72197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907835.1;locus_tag=A3216_00105;product=hypothetical protein;protein_id=OAX72197.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 19346 20185 . + . ID=gene-A3216_00110;Name=A3216_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00110 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 19346 20185 . + 0 ID=cds-OAX72198.1;Parent=gene-A3216_00110;Dbxref=NCBI_GP:OAX72198.1;Name=OAX72198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382199.1;locus_tag=A3216_00110;product=hypothetical protein;protein_id=OAX72198.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 20505 20846 . + . ID=gene-A3216_00115;Name=A3216_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00115 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 20505 20846 . + 0 ID=cds-OAX72199.1;Parent=gene-A3216_00115;Dbxref=NCBI_GP:OAX72199.1;Name=OAX72199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00115;product=hypothetical protein;protein_id=OAX72199.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 20861 21698 . - . ID=gene-A3216_00120;Name=A3216_00120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00120;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 20861 21698 . - 0 ID=cds-A3216_00120;Parent=gene-A3216_00120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011729929.1;locus_tag=A3216_00120;product=ribonuclease Z;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 21730 21912 . + . ID=gene-A3216_00125;Name=A3216_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00125 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 21730 21912 . + 0 ID=cds-OAX72200.1;Parent=gene-A3216_00125;Dbxref=NCBI_GP:OAX72200.1;Name=OAX72200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00125;product=hypothetical protein;protein_id=OAX72200.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 21977 22174 . + . ID=gene-A3216_00130;Name=A3216_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00130 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 21977 22174 . + 0 ID=cds-OAX72201.1;Parent=gene-A3216_00130;Dbxref=NCBI_GP:OAX72201.1;Name=OAX72201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00130;product=hypothetical protein;protein_id=OAX72201.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 22196 22743 . - . ID=gene-A3216_00135;Name=A3216_00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00135;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 22196 22743 . - 0 ID=cds-A3216_00135;Parent=gene-A3216_00135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007769873.1;locus_tag=A3216_00135;product=growth inhibitor PemK;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 22869 24791 . + . ID=gene-A3216_00140;Name=A3216_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00140 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 22869 24791 . + 0 ID=cds-OAX72202.1;Parent=gene-A3216_00140;Dbxref=NCBI_GP:OAX72202.1;Name=OAX72202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014878061.1;locus_tag=A3216_00140;product=elongation factor 4;protein_id=OAX72202.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 24849 26864 . - . ID=gene-A3216_00145;Name=A3216_00145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00145;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 24849 26864 . - 0 ID=cds-A3216_00145;Parent=gene-A3216_00145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014384192.1;locus_tag=A3216_00145;product=glycosyl hydrolase family 15;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 27357 27554 . + . ID=gene-A3216_00150;Name=A3216_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00150 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 27357 27554 . + 0 ID=cds-OAX72203.1;Parent=gene-A3216_00150;Dbxref=NCBI_GP:OAX72203.1;Name=OAX72203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00150;product=hypothetical protein;protein_id=OAX72203.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 27586 27777 . + . ID=gene-A3216_00155;Name=A3216_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00155 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 27586 27777 . + 0 ID=cds-OAX72204.1;Parent=gene-A3216_00155;Dbxref=NCBI_GP:OAX72204.1;Name=OAX72204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00155;product=hypothetical protein;protein_id=OAX72204.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 27912 28199 . + . ID=gene-A3216_00160;Name=A3216_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00160 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 27912 28199 . + 0 ID=cds-OAX72205.1;Parent=gene-A3216_00160;Dbxref=NCBI_GP:OAX72205.1;Name=OAX72205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49760.1;locus_tag=A3216_00160;product=hypothetical protein;protein_id=OAX72205.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 28517 29565 . + . ID=gene-A3216_00165;Name=A3216_00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00165;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 28517 29565 . + 0 ID=cds-A3216_00165;Parent=gene-A3216_00165;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907839.1;locus_tag=A3216_00165;product=sulfate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 29652 30377 . + . ID=gene-A3216_00170;Name=A3216_00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00170;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 29652 30377 . + 0 ID=cds-A3216_00170;Parent=gene-A3216_00170;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003918432.1;locus_tag=A3216_00170;product=sulfate ABC transporter permease subunit CysT;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 30395 31068 . + . ID=gene-A3216_00175;Name=A3216_00175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00175;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 30395 31068 . + 0 ID=cds-A3216_00175;Parent=gene-A3216_00175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013828450.1;locus_tag=A3216_00175;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 31144 31425 . + . ID=gene-A3216_00180;Name=A3216_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00180 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 31144 31425 . + 0 ID=cds-OAX72206.1;Parent=gene-A3216_00180;Dbxref=NCBI_GP:OAX72206.1;Name=OAX72206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00180;product=hypothetical protein;protein_id=OAX72206.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 32178 32444 . - . ID=gene-A3216_00185;Name=A3216_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00185 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 32178 32444 . - 0 ID=cds-OAX72207.1;Parent=gene-A3216_00185;Dbxref=NCBI_GP:OAX72207.1;Name=OAX72207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00185;product=hypothetical protein;protein_id=OAX72207.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 33669 34172 . + . ID=gene-A3216_00190;Name=A3216_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00190 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 33669 34172 . + 0 ID=cds-OAX72208.1;Parent=gene-A3216_00190;Dbxref=NCBI_GP:OAX72208.1;Name=OAX72208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49771.2;locus_tag=A3216_00190;product=hypothetical protein;protein_id=OAX72208.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 34218 35014 . - . ID=gene-A3216_00195;Name=A3216_00195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00195;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 34218 35014 . - 0 ID=cds-A3216_00195;Parent=gene-A3216_00195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020544067.1;locus_tag=A3216_00195;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 35069 35374 . - . ID=gene-A3216_00200;Name=A3216_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00200 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 35069 35374 . - 0 ID=cds-OAX72209.1;Parent=gene-A3216_00200;Dbxref=NCBI_GP:OAX72209.1;Name=OAX72209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00200;product=hypothetical protein;protein_id=OAX72209.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 36908 37939 . + . ID=gene-A3216_00205;Name=A3216_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00205 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 36908 37939 . + 0 ID=cds-OAX72210.1;Parent=gene-A3216_00205;Dbxref=NCBI_GP:OAX72210.1;Name=OAX72210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015631428.1;locus_tag=A3216_00205;product=heat-inducible transcriptional repressor HrcA;protein_id=OAX72210.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 38011 39147 . + . ID=gene-A3216_00210;Name=A3216_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00210 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 38011 39147 . + 0 ID=cds-OAX72211.1;Parent=gene-A3216_00210;Dbxref=NCBI_GP:OAX72211.1;Name=OAX72211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169607.1;locus_tag=A3216_00210;product=molecular chaperone DnaJ;protein_id=OAX72211.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 39179 39952 . + . ID=gene-A3216_00215;Name=A3216_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00215 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 39179 39952 . + 0 ID=cds-OAX72212.1;Parent=gene-A3216_00215;Dbxref=NCBI_GP:OAX72212.1;Name=OAX72212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907843.1;locus_tag=A3216_00215;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=OAX72212.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 40252 41301 . + . ID=gene-A3216_00220;Name=A3216_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00220 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 40252 41301 . + 0 ID=cds-OAX72213.1;Parent=gene-A3216_00220;Dbxref=NCBI_GP:OAX72213.1;Name=OAX72213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011724544.1;locus_tag=A3216_00220;product=phosphate starvation-inducible protein PhoH;protein_id=OAX72213.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 41332 41868 . + . ID=gene-A3216_00225;Name=A3216_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00225 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 41332 41868 . + 0 ID=cds-OAX72214.1;Parent=gene-A3216_00225;Dbxref=NCBI_GP:OAX72214.1;Name=OAX72214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49752.2;locus_tag=A3216_00225;product=rRNA maturation RNase YbeY;protein_id=OAX72214.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 41865 43177 . + . ID=gene-A3216_00230;Name=A3216_00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00230;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 41865 43177 . + 0 ID=cds-A3216_00230;Parent=gene-A3216_00230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628521.1;locus_tag=A3216_00230;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 43170 43496 . + . ID=gene-A3216_00235;Name=A3216_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00235 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 43170 43496 . + 0 ID=cds-OAX72353.1;Parent=gene-A3216_00235;Dbxref=NCBI_GP:OAX72353.1;Name=OAX72353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907846.1;locus_tag=A3216_00235;product=cytidine deaminase;protein_id=OAX72353.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 43620 44522 . + . ID=gene-A3216_00240;Name=A3216_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00240 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 43620 44522 . + 0 ID=cds-OAX72354.1;Parent=gene-A3216_00240;Dbxref=NCBI_GP:OAX72354.1;Name=OAX72354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953083.1;locus_tag=A3216_00240;product=GTPase Era;protein_id=OAX72354.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 44592 45935 . - . ID=gene-A3216_00245;Name=A3216_00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00245;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 44592 45935 . - 0 ID=cds-A3216_00245;Parent=gene-A3216_00245;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007770279.1;locus_tag=A3216_00245;product=amidase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 46049 46855 . + . ID=gene-A3216_00250;Name=A3216_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00250 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 46049 46855 . + 0 ID=cds-OAX72355.1;Parent=gene-A3216_00250;Dbxref=NCBI_GP:OAX72355.1;Name=OAX72355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73Y16.1;locus_tag=A3216_00250;product=DNA repair protein RecO;protein_id=OAX72355.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 46848 47738 . + . ID=gene-A3216_00255;Name=A3216_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00255 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 46848 47738 . + 0 ID=cds-OAX72215.1;Parent=gene-A3216_00255;Dbxref=NCBI_GP:OAX72215.1;Name=OAX72215.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907849.1;locus_tag=A3216_00255;product=isoprenyl transferase;protein_id=OAX72215.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 49256 51409 . + . ID=gene-A3216_00260;Name=A3216_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00260 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 49256 51409 . + 0 ID=cds-OAX72356.1;Parent=gene-A3216_00260;Dbxref=NCBI_GP:OAX72356.1;Name=OAX72356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907850.1;locus_tag=A3216_00260;product=ATP-dependent DNA helicase;protein_id=OAX72356.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 51564 51866 . + . ID=gene-A3216_00265;Name=A3216_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00265 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 51564 51866 . + 0 ID=cds-OAX72216.1;Parent=gene-A3216_00265;Dbxref=NCBI_GP:OAX72216.1;Name=OAX72216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49769.1;locus_tag=A3216_00265;product=hypothetical protein;protein_id=OAX72216.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 51860 52129 . + . ID=gene-A3216_00270;Name=A3216_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00270 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 51860 52129 . + 0 ID=cds-OAX72217.1;Parent=gene-A3216_00270;Dbxref=NCBI_GP:OAX72217.1;Name=OAX72217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907852.1;locus_tag=A3216_00270;product=transcriptional regulator;protein_id=OAX72217.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 52206 53540 . - . ID=gene-A3216_00275;Name=A3216_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00275 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 52206 53540 . - 0 ID=cds-OAX72357.1;Parent=gene-A3216_00275;Dbxref=NCBI_GP:OAX72357.1;Name=OAX72357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008259631.1;locus_tag=A3216_00275;product=ABC transporter ATP-binding protein;protein_id=OAX72357.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 53852 54049 . - . ID=gene-A3216_00280;Name=A3216_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00280 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 53852 54049 . - 0 ID=cds-OAX72218.1;Parent=gene-A3216_00280;Dbxref=NCBI_GP:OAX72218.1;Name=OAX72218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00280;product=hypothetical protein;protein_id=OAX72218.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 54644 56083 . - . ID=gene-A3216_00285;Name=A3216_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00285 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 54644 56083 . - 0 ID=cds-OAX72219.1;Parent=gene-A3216_00285;Dbxref=NCBI_GP:OAX72219.1;Name=OAX72219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907854.1;locus_tag=A3216_00285;product=hydrolase;protein_id=OAX72219.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 56146 57168 . + . ID=gene-A3216_00290;Name=A3216_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00290 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 56146 57168 . + 0 ID=cds-OAX72220.1;Parent=gene-A3216_00290;Dbxref=NCBI_GP:OAX72220.1;Name=OAX72220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008259626.1;locus_tag=A3216_00290;product=signal protein PDZ;protein_id=OAX72220.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 57314 60265 . + . ID=gene-A3216_00295;Name=A3216_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00295 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 57314 60265 . + 0 ID=cds-OAX72221.1;Parent=gene-A3216_00295;Dbxref=NCBI_GP:OAX72221.1;Name=OAX72221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978642.1;locus_tag=A3216_00295;product=hypothetical protein;protein_id=OAX72221.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 60422 60498 . + . ID=gene-A3216_00300;Name=A3216_00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_00300 GCA_001648835.1|LVXE01000001.1 tRNAscan-SE tRNA 60422 60498 . + . ID=rna-A3216_00300;Parent=gene-A3216_00300;anticodon=(pos:60456..60458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_00300;product=tRNA-Met GCA_001648835.1|LVXE01000001.1 tRNAscan-SE exon 60422 60498 . + . ID=exon-A3216_00300-1;Parent=rna-A3216_00300;anticodon=(pos:60456..60458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_00300;product=tRNA-Met GCA_001648835.1|LVXE01000001.1 Genbank gene 63497 63721 . + . ID=gene-A3216_00305;Name=A3216_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00305 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 63497 63721 . + 0 ID=cds-OAX72222.1;Parent=gene-A3216_00305;Dbxref=NCBI_GP:OAX72222.1;Name=OAX72222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00305;product=hypothetical protein;protein_id=OAX72222.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 64449 64730 . + . ID=gene-A3216_00310;Name=A3216_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00310 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 64449 64730 . + 0 ID=cds-OAX72223.1;Parent=gene-A3216_00310;Dbxref=NCBI_GP:OAX72223.1;Name=OAX72223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00310;product=hypothetical protein;protein_id=OAX72223.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 65437 66227 . + . ID=gene-A3216_00315;Name=A3216_00315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00315;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 65437 66227 . + 0 ID=cds-A3216_00315;Parent=gene-A3216_00315;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014359231.1;locus_tag=A3216_00315;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 69074 69340 . + . ID=gene-A3216_00320;Name=A3216_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00320 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 69074 69340 . + 0 ID=cds-OAX72224.1;Parent=gene-A3216_00320;Dbxref=NCBI_GP:OAX72224.1;Name=OAX72224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00320;product=hypothetical protein;protein_id=OAX72224.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 69469 69972 . - . ID=gene-A3216_00325;Name=A3216_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00325 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 69469 69972 . - 0 ID=cds-OAX72225.1;Parent=gene-A3216_00325;Dbxref=NCBI_GP:OAX72225.1;Name=OAX72225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00325;product=hypothetical protein;protein_id=OAX72225.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 70243 71147 . + . ID=gene-A3216_00330;Name=A3216_00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00330;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 70243 71147 . + 0 ID=cds-A3216_00330;Parent=gene-A3216_00330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009952991.1;locus_tag=A3216_00330;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 72714 73716 . + . ID=gene-A3216_00335;Name=A3216_00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00335;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 72714 73716 . + 0 ID=cds-A3216_00335;Parent=gene-A3216_00335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003912114.1;locus_tag=A3216_00335;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 73730 74011 . - . ID=gene-A3216_00340;Name=A3216_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00340 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 73730 74011 . - 0 ID=cds-OAX72226.1;Parent=gene-A3216_00340;Dbxref=NCBI_GP:OAX72226.1;Name=OAX72226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907857.1;locus_tag=A3216_00340;product=hypothetical protein;protein_id=OAX72226.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 74283 74537 . - . ID=gene-A3216_00345;Name=A3216_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00345 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 74283 74537 . - 0 ID=cds-OAX72227.1;Parent=gene-A3216_00345;Dbxref=NCBI_GP:OAX72227.1;Name=OAX72227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00345;product=hypothetical protein;protein_id=OAX72227.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 75280 75504 . - . ID=gene-A3216_00350;Name=A3216_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00350 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 75280 75504 . - 0 ID=cds-OAX72228.1;Parent=gene-A3216_00350;Dbxref=NCBI_GP:OAX72228.1;Name=OAX72228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00350;product=hypothetical protein;protein_id=OAX72228.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 75675 76001 . - . ID=gene-A3216_00355;Name=A3216_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00355 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 75675 76001 . - 0 ID=cds-OAX72229.1;Parent=gene-A3216_00355;Dbxref=NCBI_GP:OAX72229.1;Name=OAX72229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907858.1;locus_tag=A3216_00355;product=hypothetical protein;protein_id=OAX72229.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 76185 77387 . - . ID=gene-A3216_00360;Name=A3216_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00360 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 76185 77387 . - 0 ID=cds-OAX72230.1;Parent=gene-A3216_00360;Dbxref=NCBI_GP:OAX72230.1;Name=OAX72230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016705947.1;locus_tag=A3216_00360;product=acyl-CoA dehydrogenase;protein_id=OAX72230.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 77430 78827 . - . ID=gene-A3216_00365;Name=A3216_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00365 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 77430 78827 . - 0 ID=cds-OAX72231.1;Parent=gene-A3216_00365;Dbxref=NCBI_GP:OAX72231.1;Name=OAX72231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907860.1;locus_tag=A3216_00365;product=butyryl-CoA dehydrogenase;protein_id=OAX72231.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 78904 79671 . - . ID=gene-A3216_00370;Name=A3216_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00370 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 78904 79671 . - 0 ID=cds-OAX72232.1;Parent=gene-A3216_00370;Dbxref=NCBI_GP:OAX72232.1;Name=OAX72232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907861.1;locus_tag=A3216_00370;product=histidinol-phosphatase;protein_id=OAX72232.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 79799 80113 . + . ID=gene-A3216_00375;Name=A3216_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00375 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 79799 80113 . + 0 ID=cds-OAX72233.1;Parent=gene-A3216_00375;Dbxref=NCBI_GP:OAX72233.1;Name=OAX72233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907862.1;locus_tag=A3216_00375;product=hypothetical protein;protein_id=OAX72233.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 80254 80517 . + . ID=gene-A3216_00380;Name=A3216_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00380 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 80254 80517 . + 0 ID=cds-OAX72234.1;Parent=gene-A3216_00380;Dbxref=NCBI_GP:OAX72234.1;Name=OAX72234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907863.1;locus_tag=A3216_00380;product=hypothetical protein;protein_id=OAX72234.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 80635 82113 . + . ID=gene-A3216_00385;Name=A3216_00385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00385;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 80635 82113 . + 0 ID=cds-A3216_00385;Parent=gene-A3216_00385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020732279.1;locus_tag=A3216_00385;product=FAD-linked oxidase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 82114 83484 . - . ID=gene-A3216_00390;Name=A3216_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00390 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 82114 83484 . - 0 ID=cds-OAX72235.1;Parent=gene-A3216_00390;Dbxref=NCBI_GP:OAX72235.1;Name=OAX72235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32886.1;locus_tag=A3216_00390;product=NADP oxidoreductase;protein_id=OAX72235.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 83664 84788 . + . ID=gene-A3216_00395;Name=A3216_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00395 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 83664 84788 . + 0 ID=cds-OAX72236.1;Parent=gene-A3216_00395;Dbxref=NCBI_GP:OAX72236.1;Name=OAX72236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32885.1;locus_tag=A3216_00395;product=peptide chain release factor 2;protein_id=OAX72236.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 84995 85243 . + . ID=gene-A3216_00400;Name=A3216_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00400 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 84995 85243 . + 0 ID=cds-OAX72237.1;Parent=gene-A3216_00400;Dbxref=NCBI_GP:OAX72237.1;Name=OAX72237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00400;product=hypothetical protein;protein_id=OAX72237.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 85541 85726 . + . ID=gene-A3216_00405;Name=A3216_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00405 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 85541 85726 . + 0 ID=cds-OAX72238.1;Parent=gene-A3216_00405;Dbxref=NCBI_GP:OAX72238.1;Name=OAX72238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00405;product=hypothetical protein;protein_id=OAX72238.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 86058 86747 . + . ID=gene-A3216_00410;Name=A3216_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00410 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 86058 86747 . + 0 ID=cds-OAX72358.1;Parent=gene-A3216_00410;Dbxref=NCBI_GP:OAX72358.1;Name=OAX72358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772842.1;locus_tag=A3216_00410;product=cell division ATP-binding protein FtsE;protein_id=OAX72358.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 86748 87641 . + . ID=gene-A3216_00415;Name=A3216_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00415 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 86748 87641 . + 0 ID=cds-OAX72239.1;Parent=gene-A3216_00415;Dbxref=NCBI_GP:OAX72239.1;Name=OAX72239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015305564.1;locus_tag=A3216_00415;product=cell division protein FtsX;protein_id=OAX72239.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 87644 88126 . + . ID=gene-A3216_00420;Name=A3216_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00420 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 87644 88126 . + 0 ID=cds-OAX72240.1;Parent=gene-A3216_00420;Dbxref=NCBI_GP:OAX72240.1;Name=OAX72240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32881.1;locus_tag=A3216_00420;product=SsrA-binding protein;protein_id=OAX72240.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 89193 89561 . + . ID=gene-A3216_00425;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=A3216_00425 GCA_001648835.1|LVXE01000001.1 cmsearch tmRNA 89193 89561 . + . ID=rna-A3216_00425;Parent=gene-A3216_00425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_00425;product=transfer-messenger RNA GCA_001648835.1|LVXE01000001.1 cmsearch exon 89193 89561 . + . ID=exon-A3216_00425-1;Parent=rna-A3216_00425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_00425;product=transfer-messenger RNA GCA_001648835.1|LVXE01000001.1 Genbank gene 89945 90475 . - . ID=gene-A3216_00430;Name=A3216_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00430 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 89945 90475 . - 0 ID=cds-OAX72241.1;Parent=gene-A3216_00430;Dbxref=NCBI_GP:OAX72241.1;Name=OAX72241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00430;product=hypothetical protein;protein_id=OAX72241.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 90830 91678 . + . ID=gene-A3216_00435;Name=A3216_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00435 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 90830 91678 . + 0 ID=cds-OAX72242.1;Parent=gene-A3216_00435;Dbxref=NCBI_GP:OAX72242.1;Name=OAX72242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32879.1;locus_tag=A3216_00435;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=OAX72242.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 91681 91956 . + . ID=gene-A3216_00440;Name=A3216_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00440 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 91681 91956 . + 0 ID=cds-OAX72243.1;Parent=gene-A3216_00440;Dbxref=NCBI_GP:OAX72243.1;Name=OAX72243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907870.1;locus_tag=A3216_00440;product=hypothetical protein;protein_id=OAX72243.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 91953 92429 . - . ID=gene-A3216_00445;Name=A3216_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00445 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 91953 92429 . - 0 ID=cds-OAX72244.1;Parent=gene-A3216_00445;Dbxref=NCBI_GP:OAX72244.1;Name=OAX72244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907871.1;locus_tag=A3216_00445;product=hypothetical protein;protein_id=OAX72244.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 93091 93381 . + . ID=gene-A3216_00450;Name=A3216_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00450 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 93091 93381 . + 0 ID=cds-OAX72245.1;Parent=gene-A3216_00450;Dbxref=NCBI_GP:OAX72245.1;Name=OAX72245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00450;product=hypothetical protein;protein_id=OAX72245.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 93570 94097 . - . ID=gene-A3216_00455;Name=A3216_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00455 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 93570 94097 . - 0 ID=cds-OAX72246.1;Parent=gene-A3216_00455;Dbxref=NCBI_GP:OAX72246.1;Name=OAX72246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907872.1;locus_tag=A3216_00455;product=hypothetical protein;protein_id=OAX72246.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 94283 94510 . + . ID=gene-A3216_00460;Name=A3216_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00460 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 94283 94510 . + 0 ID=cds-OAX72247.1;Parent=gene-A3216_00460;Dbxref=NCBI_GP:OAX72247.1;Name=OAX72247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907873.1;locus_tag=A3216_00460;product=hypothetical protein;protein_id=OAX72247.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 95519 95956 . - . ID=gene-A3216_00465;Name=A3216_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00465 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 95519 95956 . - 0 ID=cds-OAX72248.1;Parent=gene-A3216_00465;Dbxref=NCBI_GP:OAX72248.1;Name=OAX72248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00465;product=hypothetical protein;protein_id=OAX72248.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 96485 97250 . - . ID=gene-A3216_00470;Name=A3216_00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00470;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 96485 97250 . - 0 ID=cds-A3216_00470;Parent=gene-A3216_00470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011727800.1;locus_tag=A3216_00470;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 97247 98395 . - . ID=gene-A3216_00475;Name=A3216_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00475 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 97247 98395 . - 0 ID=cds-OAX72249.1;Parent=gene-A3216_00475;Dbxref=NCBI_GP:OAX72249.1;Name=OAX72249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32874.1;locus_tag=A3216_00475;product=homoserine O-acetyltransferase;protein_id=OAX72249.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 98407 99683 . - . ID=gene-A3216_00480;Name=A3216_00480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00480;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 98407 99683 . - 0 ID=cds-A3216_00480;Parent=gene-A3216_00480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012879749.1;locus_tag=A3216_00480;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 cmsearch binding_site 99841 99959 . - . ID=id-LVXE01000001.1:99841..99959;Dbxref=RFAM:RF00634;Note=SAM riboswitch class IV;bound_moiety=S-adenosylmethionine;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 100109 101320 . + . ID=gene-A3216_00485;Name=A3216_00485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00485;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 100109 101320 . + 0 ID=cds-A3216_00485;Parent=gene-A3216_00485;Note=Converts isocitrate to alpha ketoglutarate%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007321210.1;locus_tag=A3216_00485;product=isocitrate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 101317 102228 . - . ID=gene-A3216_00490;Name=A3216_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00490 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 101317 102228 . - 0 ID=cds-OAX72250.1;Parent=gene-A3216_00490;Dbxref=NCBI_GP:OAX72250.1;Name=OAX72250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907875.1;locus_tag=A3216_00490;product=hydrolase;protein_id=OAX72250.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 102264 103295 . + . ID=gene-A3216_00495;Name=A3216_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00495 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 102264 103295 . + 0 ID=cds-OAX72251.1;Parent=gene-A3216_00495;Dbxref=NCBI_GP:OAX72251.1;Name=OAX72251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788453.1;locus_tag=A3216_00495;product=tryptophan--tRNA ligase;protein_id=OAX72251.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 103307 104248 . + . ID=gene-A3216_00500;Name=A3216_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00500 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 103307 104248 . + 0 ID=cds-OAX72252.1;Parent=gene-A3216_00500;Dbxref=NCBI_GP:OAX72252.1;Name=OAX72252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907877.1;locus_tag=A3216_00500;product=inner membrane protein YhjD;protein_id=OAX72252.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 105559 105786 . - . ID=gene-A3216_00505;Name=A3216_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00505 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 105559 105786 . - 0 ID=cds-OAX72253.1;Parent=gene-A3216_00505;Dbxref=NCBI_GP:OAX72253.1;Name=OAX72253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00505;product=hypothetical protein;protein_id=OAX72253.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 105950 106192 . - . ID=gene-A3216_00510;Name=A3216_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00510 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 105950 106192 . - 0 ID=cds-OAX72254.1;Parent=gene-A3216_00510;Dbxref=NCBI_GP:OAX72254.1;Name=OAX72254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00510;product=hypothetical protein;protein_id=OAX72254.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 106699 106920 . + . ID=gene-A3216_00515;Name=A3216_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00515 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 106699 106920 . + 0 ID=cds-OAX72255.1;Parent=gene-A3216_00515;Dbxref=NCBI_GP:OAX72255.1;Name=OAX72255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00515;product=hypothetical protein;protein_id=OAX72255.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 107419 107661 . - . ID=gene-A3216_00520;Name=A3216_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00520 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 107419 107661 . - 0 ID=cds-OAX72256.1;Parent=gene-A3216_00520;Dbxref=NCBI_GP:OAX72256.1;Name=OAX72256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00520;product=hypothetical protein;protein_id=OAX72256.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 108015 109250 . - . ID=gene-A3216_00525;Name=A3216_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00525 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 108015 109250 . - 0 ID=cds-OAX72257.1;Parent=gene-A3216_00525;Dbxref=NCBI_GP:OAX72257.1;Name=OAX72257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907878.1;locus_tag=A3216_00525;product=D-alanyl-D-alanine carboxypeptidase;protein_id=OAX72257.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 110100 110294 . + . ID=gene-A3216_00530;Name=A3216_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00530 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 110100 110294 . + 0 ID=cds-OAX72258.1;Parent=gene-A3216_00530;Dbxref=NCBI_GP:OAX72258.1;Name=OAX72258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00530;product=hypothetical protein;protein_id=OAX72258.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 110672 110875 . - . ID=gene-A3216_00535;Name=A3216_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00535 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 110672 110875 . - 0 ID=cds-OAX72259.1;Parent=gene-A3216_00535;Dbxref=NCBI_GP:OAX72259.1;Name=OAX72259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00535;product=hypothetical protein;protein_id=OAX72259.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 111492 111782 . + . ID=gene-A3216_00540;Name=A3216_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00540 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 111492 111782 . + 0 ID=cds-OAX72260.1;Parent=gene-A3216_00540;Dbxref=NCBI_GP:OAX72260.1;Name=OAX72260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00540;product=hypothetical protein;protein_id=OAX72260.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 112122 112361 . - . ID=gene-A3216_00545;Name=A3216_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00545 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 112122 112361 . - 0 ID=cds-OAX72261.1;Parent=gene-A3216_00545;Dbxref=NCBI_GP:OAX72261.1;Name=OAX72261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00545;product=hypothetical protein;protein_id=OAX72261.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 112801 112980 . + . ID=gene-A3216_00550;Name=A3216_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00550 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 112801 112980 . + 0 ID=cds-OAX72262.1;Parent=gene-A3216_00550;Dbxref=NCBI_GP:OAX72262.1;Name=OAX72262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00550;product=hypothetical protein;protein_id=OAX72262.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 114009 114803 . - . ID=gene-A3216_00555;Name=A3216_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00555 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 114009 114803 . - 0 ID=cds-OAX72263.1;Parent=gene-A3216_00555;Dbxref=NCBI_GP:OAX72263.1;Name=OAX72263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003882376.1;locus_tag=A3216_00555;product=succinate dehydrogenase iron-sulfur subunit;protein_id=OAX72263.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 114803 116557 . - . ID=gene-A3216_00560;Name=A3216_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00560 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 114803 116557 . - 0 ID=cds-OAX72264.1;Parent=gene-A3216_00560;Dbxref=NCBI_GP:OAX72264.1;Name=OAX72264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907880.1;locus_tag=A3216_00560;product=succinate dehydrogenase flavoprotein subunit;protein_id=OAX72264.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 116578 117069 . - . ID=gene-A3216_00565;Name=A3216_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00565 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 116578 117069 . - 0 ID=cds-OAX72265.1;Parent=gene-A3216_00565;Dbxref=NCBI_GP:OAX72265.1;Name=OAX72265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907881.1;locus_tag=A3216_00565;product=succinate dehydrogenase;protein_id=OAX72265.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 117066 117422 . - . ID=gene-A3216_00570;Name=A3216_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00570 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 117066 117422 . - 0 ID=cds-OAX72266.1;Parent=gene-A3216_00570;Dbxref=NCBI_GP:OAX72266.1;Name=OAX72266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954089.1;locus_tag=A3216_00570;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=OAX72266.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 117816 118904 . + . ID=gene-A3216_00575;Name=A3216_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00575 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 117816 118904 . + 0 ID=cds-OAX72267.1;Parent=gene-A3216_00575;Dbxref=NCBI_GP:OAX72267.1;Name=OAX72267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014877158.1;locus_tag=A3216_00575;product=adenosine deaminase;protein_id=OAX72267.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 118965 119985 . + . ID=gene-A3216_00580;Name=A3216_00580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00580;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 118965 119985 . + 0 ID=cds-A3216_00580;Parent=gene-A3216_00580;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168009.1;locus_tag=A3216_00580;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 119990 120950 . - . ID=gene-A3216_00585;Name=A3216_00585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00585;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 119990 120950 . - 0 ID=cds-A3216_00585;Parent=gene-A3216_00585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954080.1;locus_tag=A3216_00585;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 121019 122290 . - . ID=gene-A3216_00590;Name=A3216_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00590 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 121019 122290 . - 0 ID=cds-OAX72268.1;Parent=gene-A3216_00590;Dbxref=NCBI_GP:OAX72268.1;Name=OAX72268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907884.1;locus_tag=A3216_00590;product=primosomal protein;protein_id=OAX72268.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 123404 123971 . + . ID=gene-A3216_00595;Name=A3216_00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00595;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 123404 123971 . + 0 ID=cds-A3216_00595;Parent=gene-A3216_00595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005114587.1;locus_tag=A3216_00595;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 123984 125588 . - . ID=gene-A3216_00600;Name=A3216_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00600 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 123984 125588 . - 0 ID=cds-OAX72359.1;Parent=gene-A3216_00600;Dbxref=NCBI_GP:OAX72359.1;Name=OAX72359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954073.1;locus_tag=A3216_00600;product=phosphomannomutase;protein_id=OAX72359.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 125597 126403 . - . ID=gene-A3216_00605;Name=A3216_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00605 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 125597 126403 . - 0 ID=cds-OAX72269.1;Parent=gene-A3216_00605;Dbxref=NCBI_GP:OAX72269.1;Name=OAX72269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46862.1;locus_tag=A3216_00605;product=purine-nucleoside phosphorylase;protein_id=OAX72269.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 126474 126818 . - . ID=gene-A3216_00610;Name=A3216_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00610 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 126474 126818 . - 0 ID=cds-OAX72270.1;Parent=gene-A3216_00610;Dbxref=NCBI_GP:OAX72270.1;Name=OAX72270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00610;product=hypothetical protein;protein_id=OAX72270.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 126817 127122 . + . ID=gene-A3216_00615;Name=A3216_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00615 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 126817 127122 . + 0 ID=cds-OAX72271.1;Parent=gene-A3216_00615;Dbxref=NCBI_GP:OAX72271.1;Name=OAX72271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00615;product=hypothetical protein;protein_id=OAX72271.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 127524 128198 . - . ID=gene-A3216_00620;Name=A3216_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00620 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 127524 128198 . - 0 ID=cds-OAX72272.1;Parent=gene-A3216_00620;Dbxref=NCBI_GP:OAX72272.1;Name=OAX72272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00620;product=hypothetical protein;protein_id=OAX72272.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 128609 128944 . - . ID=gene-A3216_00625;Name=A3216_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00625 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 128609 128944 . - 0 ID=cds-OAX72273.1;Parent=gene-A3216_00625;Dbxref=NCBI_GP:OAX72273.1;Name=OAX72273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00625;product=hypothetical protein;protein_id=OAX72273.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 129003 129830 . + . ID=gene-A3216_00630;Name=A3216_00630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00630;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 129003 129830 . + 0 ID=cds-A3216_00630;Parent=gene-A3216_00630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393101.1;locus_tag=A3216_00630;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 129965 130444 . - . ID=gene-A3216_00635;Name=A3216_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00635 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 129965 130444 . - 0 ID=cds-OAX72274.1;Parent=gene-A3216_00635;Dbxref=NCBI_GP:OAX72274.1;Name=OAX72274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907887.1;locus_tag=A3216_00635;product=gamma-glutamylcyclotransferase;protein_id=OAX72274.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 130573 131994 . + . ID=gene-A3216_00640;Name=A3216_00640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00640;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 130573 131994 . + 0 ID=cds-A3216_00640;Parent=gene-A3216_00640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003882408.1;locus_tag=A3216_00640;product=NAD(P)H-quinone dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 132085 133842 . + . ID=gene-A3216_00645;Name=A3216_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00645 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 132085 133842 . + 0 ID=cds-OAX72275.1;Parent=gene-A3216_00645;Dbxref=NCBI_GP:OAX72275.1;Name=OAX72275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53435.1;locus_tag=A3216_00645;product=glycerol-3-phosphate dehydrogenase;protein_id=OAX72275.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 134204 134446 . + . ID=gene-A3216_00650;Name=A3216_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00650 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 134204 134446 . + 0 ID=cds-OAX72276.1;Parent=gene-A3216_00650;Dbxref=NCBI_GP:OAX72276.1;Name=OAX72276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00650;product=hypothetical protein;protein_id=OAX72276.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 134913 135827 . + . ID=gene-A3216_00655;Name=A3216_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00655 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 134913 135827 . + 0 ID=cds-OAX72277.1;Parent=gene-A3216_00655;Dbxref=NCBI_GP:OAX72277.1;Name=OAX72277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907889.1;locus_tag=A3216_00655;product=esterase;protein_id=OAX72277.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 136237 136452 . - . ID=gene-A3216_00660;Name=A3216_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00660 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 136237 136452 . - 0 ID=cds-OAX72278.1;Parent=gene-A3216_00660;Dbxref=NCBI_GP:OAX72278.1;Name=OAX72278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00660;product=hypothetical protein;protein_id=OAX72278.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 136929 137378 . - . ID=gene-A3216_00665;Name=A3216_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00665 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 136929 137378 . - 0 ID=cds-OAX72279.1;Parent=gene-A3216_00665;Dbxref=NCBI_GP:OAX72279.1;Name=OAX72279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00665;product=hypothetical protein;protein_id=OAX72279.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 137797 138024 . - . ID=gene-A3216_00670;Name=A3216_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00670 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 137797 138024 . - 0 ID=cds-OAX72280.1;Parent=gene-A3216_00670;Dbxref=NCBI_GP:OAX72280.1;Name=OAX72280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00670;product=hypothetical protein;protein_id=OAX72280.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 138265 138558 . - . ID=gene-A3216_00675;Name=A3216_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00675 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 138265 138558 . - 0 ID=cds-OAX72281.1;Parent=gene-A3216_00675;Dbxref=NCBI_GP:OAX72281.1;Name=OAX72281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00675;product=hypothetical protein;protein_id=OAX72281.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 138558 138872 . - . ID=gene-A3216_00680;Name=A3216_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00680 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 138558 138872 . - 0 ID=cds-OAX72282.1;Parent=gene-A3216_00680;Dbxref=NCBI_GP:OAX72282.1;Name=OAX72282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00680;product=hypothetical protein;protein_id=OAX72282.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 140054 140725 . - . ID=gene-A3216_00685;Name=A3216_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00685 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 140054 140725 . - 0 ID=cds-OAX72283.1;Parent=gene-A3216_00685;Dbxref=NCBI_GP:OAX72283.1;Name=OAX72283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907890.1;locus_tag=A3216_00685;product=TetR family transcriptional regulator;protein_id=OAX72283.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 140787 142172 . - . ID=gene-A3216_00690;Name=A3216_00690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00690;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 140787 142172 . - 0 ID=cds-A3216_00690;Parent=gene-A3216_00690;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727300.1;locus_tag=A3216_00690;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 142629 142838 . - . ID=gene-A3216_00695;Name=A3216_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00695 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 142629 142838 . - 0 ID=cds-OAX72284.1;Parent=gene-A3216_00695;Dbxref=NCBI_GP:OAX72284.1;Name=OAX72284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00695;product=hypothetical protein;protein_id=OAX72284.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 143536 143931 . + . ID=gene-A3216_00700;Name=A3216_00700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00700;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 143536 143931 . + 0 ID=cds-A3216_00700;Parent=gene-A3216_00700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008259938.1;locus_tag=A3216_00700;product=AsnC family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 144390 144575 . + . ID=gene-A3216_00705;Name=A3216_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00705 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 144390 144575 . + 0 ID=cds-OAX72285.1;Parent=gene-A3216_00705;Dbxref=NCBI_GP:OAX72285.1;Name=OAX72285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00705;product=hypothetical protein;protein_id=OAX72285.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 144880 145434 . + . ID=gene-A3216_00710;Name=A3216_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00710 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 144880 145434 . + 0 ID=cds-OAX72286.1;Parent=gene-A3216_00710;Dbxref=NCBI_GP:OAX72286.1;Name=OAX72286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00710;product=hypothetical protein;protein_id=OAX72286.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 145467 145843 . + . ID=gene-A3216_00715;Name=A3216_00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00715;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 145467 145843 . + 0 ID=cds-A3216_00715;Parent=gene-A3216_00715;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015294317.1;locus_tag=A3216_00715;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 145952 146263 . + . ID=gene-A3216_00720;Name=A3216_00720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00720;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 145952 146263 . + 0 ID=cds-A3216_00720;Parent=gene-A3216_00720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168048.1;locus_tag=A3216_00720;product=UsfY protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 146728 146967 . + . ID=gene-A3216_00725;Name=A3216_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00725 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 146728 146967 . + 0 ID=cds-OAX72287.1;Parent=gene-A3216_00725;Dbxref=NCBI_GP:OAX72287.1;Name=OAX72287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00725;product=hypothetical protein;protein_id=OAX72287.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 147099 147825 . + . ID=gene-A3216_00730;Name=A3216_00730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00730;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 147099 147825 . + 0 ID=cds-A3216_00730;Parent=gene-A3216_00730;Note=Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor is a general stress response regulator%3B expressed in stationary phase and under nitrogen depletion and cold shock%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168051.1;locus_tag=A3216_00730;product=RNA polymerase subunit sigma;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 147833 149629 . - . ID=gene-A3216_00735;Name=A3216_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00735 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 147833 149629 . - 0 ID=cds-OAX72288.1;Parent=gene-A3216_00735;Dbxref=NCBI_GP:OAX72288.1;Name=OAX72288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015305326.1;locus_tag=A3216_00735;product=acetyl-/propionyl-CoA carboxylase subunit alpha;protein_id=OAX72288.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 149740 150154 . - . ID=gene-A3216_00740;Name=A3216_00740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00740;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 149740 150154 . - 0 ID=cds-A3216_00740;Parent=gene-A3216_00740;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011558701.1;locus_tag=A3216_00740;product=cysteine desufuration protein SufE;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 150165 151055 . - . ID=gene-A3216_00745;Name=A3216_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00745 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 150165 151055 . - 0 ID=cds-OAX72289.1;Parent=gene-A3216_00745;Dbxref=NCBI_GP:OAX72289.1;Name=OAX72289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46700.1;locus_tag=A3216_00745;product=thiosulfate sulfurtransferase;protein_id=OAX72289.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 151256 151897 . - . ID=gene-A3216_00750;Name=A3216_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00750 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 151256 151897 . - 0 ID=cds-OAX72290.1;Parent=gene-A3216_00750;Dbxref=NCBI_GP:OAX72290.1;Name=OAX72290.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49670.1;locus_tag=A3216_00750;product=septum formation inhibitor Maf;protein_id=OAX72290.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 151894 152148 . - . ID=gene-A3216_00755;Name=A3216_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00755 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 151894 152148 . - 0 ID=cds-OAX72291.1;Parent=gene-A3216_00755;Dbxref=NCBI_GP:OAX72291.1;Name=OAX72291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907894.1;locus_tag=A3216_00755;product=hypothetical protein;protein_id=OAX72291.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 152145 153794 . - . ID=gene-A3216_00760;Name=A3216_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00760 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 152145 153794 . - 0 ID=cds-OAX72292.1;Parent=gene-A3216_00760;Dbxref=NCBI_GP:OAX72292.1;Name=OAX72292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003886377.1;locus_tag=A3216_00760;product=methylmalonyl-CoA carboxyltransferase;protein_id=OAX72292.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 153857 154681 . + . ID=gene-A3216_00765;Name=A3216_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00765 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 153857 154681 . + 0 ID=cds-OAX72360.1;Parent=gene-A3216_00765;Dbxref=NCBI_GP:OAX72360.1;Name=OAX72360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907896.1;locus_tag=A3216_00765;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=OAX72360.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 154814 155332 . + . ID=gene-A3216_00770;Name=A3216_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00770 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 154814 155332 . + 0 ID=cds-OAX72361.1;Parent=gene-A3216_00770;Dbxref=NCBI_GP:OAX72361.1;Name=OAX72361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874528.1;locus_tag=A3216_00770;product=hypothetical protein;protein_id=OAX72361.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 155287 155973 . - . ID=gene-A3216_00775;Name=A3216_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00775 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 155287 155973 . - 0 ID=cds-OAX72293.1;Parent=gene-A3216_00775;Dbxref=NCBI_GP:OAX72293.1;Name=OAX72293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907898.1;locus_tag=A3216_00775;product=hypothetical protein;protein_id=OAX72293.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 156061 157380 . + . ID=gene-A3216_00780;Name=A3216_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00780 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 156061 157380 . + 0 ID=cds-OAX72294.1;Parent=gene-A3216_00780;Dbxref=NCBI_GP:OAX72294.1;Name=OAX72294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46701.1;locus_tag=A3216_00780;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=OAX72294.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 157380 157895 . + . ID=gene-A3216_00785;Name=A3216_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00785 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 157380 157895 . + 0 ID=cds-OAX72295.1;Parent=gene-A3216_00785;Dbxref=NCBI_GP:OAX72295.1;Name=OAX72295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46702.1;locus_tag=A3216_00785;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=OAX72295.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 157990 159159 . + . ID=gene-A3216_00790;Name=A3216_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00790 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 157990 159159 . + 0 ID=cds-OAX72296.1;Parent=gene-A3216_00790;Dbxref=NCBI_GP:OAX72296.1;Name=OAX72296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020732115.1;locus_tag=A3216_00790;product=acyl-CoA dehydrogenase;protein_id=OAX72296.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 159251 159586 . - . ID=gene-A3216_00795;Name=A3216_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00795 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 159251 159586 . - 0 ID=cds-OAX72297.1;Parent=gene-A3216_00795;Dbxref=NCBI_GP:OAX72297.1;Name=OAX72297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00795;product=hypothetical protein;protein_id=OAX72297.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 159658 160676 . - . ID=gene-A3216_00800;Name=A3216_00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00800;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 159658 160676 . - 0 ID=cds-A3216_00800;Parent=gene-A3216_00800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019734995.1;locus_tag=A3216_00800;product=phosphate ABC transporter permease subunit PstC;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 162480 162725 . - . ID=gene-A3216_00805;Name=A3216_00805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00805;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 162480 162725 . - 0 ID=cds-A3216_00805;Parent=gene-A3216_00805;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003917376.1;locus_tag=A3216_00805;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 163000 164122 . + . ID=gene-A3216_00810;Name=A3216_00810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00810;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 163000 164122 . + 0 ID=cds-A3216_00810;Parent=gene-A3216_00810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020729642.1;locus_tag=A3216_00810;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 164887 165123 . + . ID=gene-A3216_00815;Name=A3216_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00815 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 164887 165123 . + 0 ID=cds-OAX72298.1;Parent=gene-A3216_00815;Dbxref=NCBI_GP:OAX72298.1;Name=OAX72298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00815;product=hypothetical protein;protein_id=OAX72298.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 165920 167142 . - . ID=gene-A3216_00820;Name=A3216_00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00820;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 165920 167142 . - 0 ID=cds-A3216_00820;Parent=gene-A3216_00820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003901586.1;locus_tag=A3216_00820;product=acyl-CoA transferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 167055 167723 . - . ID=gene-A3216_00825;Name=A3216_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00825 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 167055 167723 . - 0 ID=cds-OAX72299.1;Parent=gene-A3216_00825;Dbxref=NCBI_GP:OAX72299.1;Name=OAX72299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00825;product=hypothetical protein;protein_id=OAX72299.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 167771 167968 . - . ID=gene-A3216_00830;Name=A3216_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00830 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 167771 167968 . - 0 ID=cds-OAX72300.1;Parent=gene-A3216_00830;Dbxref=NCBI_GP:OAX72300.1;Name=OAX72300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00830;product=hypothetical protein;protein_id=OAX72300.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 168930 171107 . - . ID=gene-A3216_00835;Name=A3216_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00835 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 168930 171107 . - 0 ID=cds-OAX72301.1;Parent=gene-A3216_00835;Dbxref=NCBI_GP:OAX72301.1;Name=OAX72301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634421.1;locus_tag=A3216_00835;product=copper-translocating P-type ATPase;protein_id=OAX72301.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 171118 171396 . - . ID=gene-A3216_00840;Name=A3216_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00840 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 171118 171396 . - 0 ID=cds-OAX72302.1;Parent=gene-A3216_00840;Dbxref=NCBI_GP:OAX72302.1;Name=OAX72302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907903.1;locus_tag=A3216_00840;product=hypothetical protein;protein_id=OAX72302.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 171542 172161 . - . ID=gene-A3216_00845;Name=A3216_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00845;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 171542 172161 . - 0 ID=cds-A3216_00845;Parent=gene-A3216_00845;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955373.1;locus_tag=A3216_00845;product=TIGR03089 family protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 172200 173669 . - . ID=gene-A3216_00850;Name=A3216_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00850 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 172200 173669 . - 0 ID=cds-OAX72303.1;Parent=gene-A3216_00850;Dbxref=NCBI_GP:OAX72303.1;Name=OAX72303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907904.1;locus_tag=A3216_00850;product=LytR family transcriptional regulator;protein_id=OAX72303.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 173758 174693 . + . ID=gene-A3216_00855;Name=A3216_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00855 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 173758 174693 . + 0 ID=cds-OAX72304.1;Parent=gene-A3216_00855;Dbxref=NCBI_GP:OAX72304.1;Name=OAX72304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907905.1;locus_tag=A3216_00855;product=dTDP-4-dehydrorhamnose reductase;protein_id=OAX72304.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 174686 175612 . + . ID=gene-A3216_00860;Name=A3216_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00860 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 174686 175612 . + 0 ID=cds-OAX72305.1;Parent=gene-A3216_00860;Dbxref=NCBI_GP:OAX72305.1;Name=OAX72305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907906.1;locus_tag=A3216_00860;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;protein_id=OAX72305.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 175614 176690 . + . ID=gene-A3216_00865;Name=A3216_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00865 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 175614 176690 . + 0 ID=cds-OAX72306.1;Parent=gene-A3216_00865;Dbxref=NCBI_GP:OAX72306.1;Name=OAX72306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907907.1;locus_tag=A3216_00865;product=GDP-mannose pyrophosphorylase;protein_id=OAX72306.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 176891 177172 . - . ID=gene-A3216_00870;Name=A3216_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00870 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 176891 177172 . - 0 ID=cds-OAX72307.1;Parent=gene-A3216_00870;Dbxref=NCBI_GP:OAX72307.1;Name=OAX72307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00870;product=hypothetical protein;protein_id=OAX72307.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 177630 177890 . - . ID=gene-A3216_00875;Name=A3216_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00875 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 177630 177890 . - 0 ID=cds-OAX72308.1;Parent=gene-A3216_00875;Dbxref=NCBI_GP:OAX72308.1;Name=OAX72308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907908.1;locus_tag=A3216_00875;product=hypothetical protein;protein_id=OAX72308.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 178108 179775 . - . ID=gene-A3216_00880;Name=A3216_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00880 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 178108 179775 . - 0 ID=cds-OAX72309.1;Parent=gene-A3216_00880;Dbxref=NCBI_GP:OAX72309.1;Name=OAX72309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907909.1;locus_tag=A3216_00880;product=lactate dehydrogenase;protein_id=OAX72309.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 179797 180489 . - . ID=gene-A3216_00885;Name=A3216_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00885 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 179797 180489 . - 0 ID=cds-OAX72362.1;Parent=gene-A3216_00885;Dbxref=NCBI_GP:OAX72362.1;Name=OAX72362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907910.1;locus_tag=A3216_00885;product=hypothetical protein;protein_id=OAX72362.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 180530 181903 . - . ID=gene-A3216_00890;Name=A3216_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00890 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 180530 181903 . - 0 ID=cds-OAX72310.1;Parent=gene-A3216_00890;Dbxref=NCBI_GP:OAX72310.1;Name=OAX72310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCK2.1;locus_tag=A3216_00890;product=coenzyme F420-0:L-glutamate ligase;protein_id=OAX72310.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 181900 182901 . - . ID=gene-A3216_00895;Name=A3216_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00895 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 181900 182901 . - 0 ID=cds-OAX72311.1;Parent=gene-A3216_00895;Dbxref=NCBI_GP:OAX72311.1;Name=OAX72311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCK1.2;locus_tag=A3216_00895;product=2-phospho-L-lactate transferase;protein_id=OAX72311.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 183298 183633 . + . ID=gene-A3216_00900;Name=A3216_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00900 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 183298 183633 . + 0 ID=cds-OAX72312.1;Parent=gene-A3216_00900;Dbxref=NCBI_GP:OAX72312.1;Name=OAX72312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168083.1;locus_tag=A3216_00900;product=transcriptional regulator;protein_id=OAX72312.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 183662 184081 . - . ID=gene-A3216_00905;Name=A3216_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00905 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 183662 184081 . - 0 ID=cds-OAX72363.1;Parent=gene-A3216_00905;Dbxref=NCBI_GP:OAX72363.1;Name=OAX72363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015305369.1;locus_tag=A3216_00905;product=exonuclease;protein_id=OAX72363.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 184205 184702 . + . ID=gene-A3216_00910;Name=A3216_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00910 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 184205 184702 . + 0 ID=cds-OAX72313.1;Parent=gene-A3216_00910;Dbxref=NCBI_GP:OAX72313.1;Name=OAX72313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907915.1;locus_tag=A3216_00910;product=hypothetical protein;protein_id=OAX72313.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 184812 186218 . + . ID=gene-A3216_00915;Name=A3216_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00915 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 184812 186218 . + 0 ID=cds-OAX72314.1;Parent=gene-A3216_00915;Dbxref=NCBI_GP:OAX72314.1;Name=OAX72314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907916.1;locus_tag=A3216_00915;product=phosphomannomutase/phosphoglucomutase;protein_id=OAX72314.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 186215 187312 . + . ID=gene-A3216_00920;Name=A3216_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00920 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 186215 187312 . + 0 ID=cds-OAX72315.1;Parent=gene-A3216_00920;Dbxref=NCBI_GP:OAX72315.1;Name=OAX72315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907917.1;locus_tag=A3216_00920;product=TobH protein;protein_id=OAX72315.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 187320 188552 . + . ID=gene-A3216_00925;Name=A3216_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00925 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 187320 188552 . + 0 ID=cds-OAX72316.1;Parent=gene-A3216_00925;Dbxref=NCBI_GP:OAX72316.1;Name=OAX72316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014814633.1;locus_tag=A3216_00925;product=mannose-6-phosphate isomerase%2C class I;protein_id=OAX72316.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 188575 189926 . - . ID=gene-A3216_00930;Name=A3216_00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00930;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 188575 189926 . - 0 ID=cds-A3216_00930;Parent=gene-A3216_00930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012775813.1;locus_tag=A3216_00930;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 189983 191492 . + . ID=gene-A3216_00935;Name=A3216_00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00935;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 189983 191492 . + 0 ID=cds-A3216_00935;Parent=gene-A3216_00935;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385676.1;locus_tag=A3216_00935;product=amino acid permease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 192209 192460 . - . ID=gene-A3216_00940;Name=A3216_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00940 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 192209 192460 . - 0 ID=cds-OAX72317.1;Parent=gene-A3216_00940;Dbxref=NCBI_GP:OAX72317.1;Name=OAX72317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_00940;product=hypothetical protein;protein_id=OAX72317.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 193760 195238 . + . ID=gene-A3216_00945;Name=A3216_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00945 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 193760 195238 . + 0 ID=cds-OAX72318.1;Parent=gene-A3216_00945;Dbxref=NCBI_GP:OAX72318.1;Name=OAX72318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385673.1;locus_tag=A3216_00945;product=adenosylhomocysteinase;protein_id=OAX72318.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 195281 195913 . + . ID=gene-A3216_00950;Name=A3216_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00950 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 195281 195913 . + 0 ID=cds-OAX72319.1;Parent=gene-A3216_00950;Dbxref=NCBI_GP:OAX72319.1;Name=OAX72319.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907920.1;locus_tag=A3216_00950;product=thymidylate kinase;protein_id=OAX72319.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 196006 196692 . + . ID=gene-A3216_00955;Name=A3216_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00955 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 196006 196692 . + 0 ID=cds-OAX72320.1;Parent=gene-A3216_00955;Dbxref=NCBI_GP:OAX72320.1;Name=OAX72320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018601429.1;locus_tag=A3216_00955;product=DNA-binding response regulator;protein_id=OAX72320.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 196820 198508 . + . ID=gene-A3216_00960;Name=A3216_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00960 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 196820 198508 . + 0 ID=cds-OAX72364.1;Parent=gene-A3216_00960;Dbxref=NCBI_GP:OAX72364.1;Name=OAX72364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCJ1.1;locus_tag=A3216_00960;product=two-component sensor histidine kinase;protein_id=OAX72364.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 198508 200274 . + . ID=gene-A3216_00965;Name=A3216_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00965 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 198508 200274 . + 0 ID=cds-OAX72321.1;Parent=gene-A3216_00965;Dbxref=NCBI_GP:OAX72321.1;Name=OAX72321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017352010.1;locus_tag=A3216_00965;product=hypothetical protein;protein_id=OAX72321.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 200395 200652 . + . ID=gene-A3216_00970;Name=A3216_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00970 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 200395 200652 . + 0 ID=cds-OAX72365.1;Parent=gene-A3216_00970;Dbxref=NCBI_GP:OAX72365.1;Name=OAX72365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907924.1;locus_tag=A3216_00970;product=hypothetical protein;protein_id=OAX72365.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 200792 200986 . + . ID=gene-A3216_00975;Name=A3216_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00975 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 200792 200986 . + 0 ID=cds-OAX72322.1;Parent=gene-A3216_00975;Dbxref=NCBI_GP:OAX72322.1;Name=OAX72322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907925.1;locus_tag=A3216_00975;product=hypothetical protein;protein_id=OAX72322.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 201090 201779 . + . ID=gene-A3216_00980;Name=A3216_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00980 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 201090 201779 . + 0 ID=cds-OAX72323.1;Parent=gene-A3216_00980;Dbxref=NCBI_GP:OAX72323.1;Name=OAX72323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907926.1;locus_tag=A3216_00980;product=ribosomal subunit interface protein;protein_id=OAX72323.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 201859 204681 . + . ID=gene-A3216_00985;Name=A3216_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00985 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 201859 204681 . + 0 ID=cds-OAX72324.1;Parent=gene-A3216_00985;Dbxref=NCBI_GP:OAX72324.1;Name=OAX72324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712263.1;locus_tag=A3216_00985;product=preprotein translocase subunit SecA;protein_id=OAX72324.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 204732 205448 . + . ID=gene-A3216_00990;Name=A3216_00990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_00990;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 204732 205448 . + 0 ID=cds-A3216_00990;Parent=gene-A3216_00990;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014001639.1;locus_tag=A3216_00990;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 205818 206300 . + . ID=gene-A3216_00995;Name=A3216_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_00995 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 205818 206300 . + 0 ID=cds-OAX72325.1;Parent=gene-A3216_00995;Dbxref=NCBI_GP:OAX72325.1;Name=OAX72325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168109.1;locus_tag=A3216_00995;product=potassium transporter TrkA;protein_id=OAX72325.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 206305 207462 . + . ID=gene-A3216_01000;Name=A3216_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01000 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 206305 207462 . + 0 ID=cds-OAX72326.1;Parent=gene-A3216_01000;Dbxref=NCBI_GP:OAX72326.1;Name=OAX72326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907929.1;locus_tag=A3216_01000;product=potassium transporter;protein_id=OAX72326.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 207555 207917 . - . ID=gene-A3216_01005;Name=A3216_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01005 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 207555 207917 . - 0 ID=cds-OAX72327.1;Parent=gene-A3216_01005;Dbxref=NCBI_GP:OAX72327.1;Name=OAX72327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01005;product=hypothetical protein;protein_id=OAX72327.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 208318 208803 . + . ID=gene-A3216_01010;Name=A3216_01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01010;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 208318 208803 . + 0 ID=cds-A3216_01010;Parent=gene-A3216_01010;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003904218.1;locus_tag=A3216_01010;product=diacylglycerol O-acyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 208892 209125 . - . ID=gene-A3216_01015;Name=A3216_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01015 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 208892 209125 . - 0 ID=cds-OAX72328.1;Parent=gene-A3216_01015;Dbxref=NCBI_GP:OAX72328.1;Name=OAX72328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01015;product=hypothetical protein;protein_id=OAX72328.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 210169 210390 . + . ID=gene-A3216_01020;Name=A3216_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01020 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 210169 210390 . + 0 ID=cds-OAX72329.1;Parent=gene-A3216_01020;Dbxref=NCBI_GP:OAX72329.1;Name=OAX72329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01020;product=hypothetical protein;protein_id=OAX72329.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 210459 210780 . + . ID=gene-A3216_01025;Name=A3216_01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01025;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 210459 210780 . + 0 ID=cds-A3216_01025;Parent=gene-A3216_01025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007168115.1;locus_tag=A3216_01025;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 212188 213447 . + . ID=gene-A3216_01030;Name=A3216_01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01030;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 212188 213447 . + 0 ID=cds-A3216_01030;Parent=gene-A3216_01030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773096.1;locus_tag=A3216_01030;product=stearoyl-CoA 9-desaturase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 213827 214063 . - . ID=gene-A3216_01035;Name=A3216_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01035 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 213827 214063 . - 0 ID=cds-OAX72330.1;Parent=gene-A3216_01035;Dbxref=NCBI_GP:OAX72330.1;Name=OAX72330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01035;product=hypothetical protein;protein_id=OAX72330.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 214665 215648 . - . ID=gene-A3216_01040;Name=A3216_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01040 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 214665 215648 . - 0 ID=cds-OAX72366.1;Parent=gene-A3216_01040;Dbxref=NCBI_GP:OAX72366.1;Name=OAX72366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907930.1;locus_tag=A3216_01040;product=ribosome small subunit-dependent GTPase A;protein_id=OAX72366.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 215645 216937 . - . ID=gene-A3216_01045;Name=A3216_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01045 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 215645 216937 . - 0 ID=cds-OAX72331.1;Parent=gene-A3216_01045;Dbxref=NCBI_GP:OAX72331.1;Name=OAX72331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCI3.1;locus_tag=A3216_01045;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=OAX72331.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 216984 217742 . + . ID=gene-A3216_01050;Name=A3216_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01050 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 216984 217742 . + 0 ID=cds-OAX72332.1;Parent=gene-A3216_01050;Dbxref=NCBI_GP:OAX72332.1;Name=OAX72332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907932.1;locus_tag=A3216_01050;product=hypothetical protein;protein_id=OAX72332.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 219356 219559 . - . ID=gene-A3216_01055;Name=A3216_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01055 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 219356 219559 . - 0 ID=cds-OAX72333.1;Parent=gene-A3216_01055;Dbxref=NCBI_GP:OAX72333.1;Name=OAX72333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01055;product=hypothetical protein;protein_id=OAX72333.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 221174 221560 . + . ID=gene-A3216_01060;Name=A3216_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01060 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 221174 221560 . + 0 ID=cds-OAX72334.1;Parent=gene-A3216_01060;Dbxref=NCBI_GP:OAX72334.1;Name=OAX72334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01060;product=hypothetical protein;protein_id=OAX72334.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 222403 222579 . + . ID=gene-A3216_01065;Name=A3216_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01065 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 222403 222579 . + 0 ID=cds-OAX72335.1;Parent=gene-A3216_01065;Dbxref=NCBI_GP:OAX72335.1;Name=OAX72335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907933.1;locus_tag=A3216_01065;product=hypothetical protein;protein_id=OAX72335.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 222657 222836 . + . ID=gene-A3216_01070;Name=A3216_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01070 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 222657 222836 . + 0 ID=cds-OAX72336.1;Parent=gene-A3216_01070;Dbxref=NCBI_GP:OAX72336.1;Name=OAX72336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01070;product=hypothetical protein;protein_id=OAX72336.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 224113 224316 . - . ID=gene-A3216_01075;Name=A3216_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01075 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 224113 224316 . - 0 ID=cds-OAX72337.1;Parent=gene-A3216_01075;Dbxref=NCBI_GP:OAX72337.1;Name=OAX72337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01075;product=hypothetical protein;protein_id=OAX72337.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 224870 225283 . - . ID=gene-A3216_01080;Name=A3216_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01080 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 224870 225283 . - 0 ID=cds-OAX72338.1;Parent=gene-A3216_01080;Dbxref=NCBI_GP:OAX72338.1;Name=OAX72338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01080;product=hypothetical protein;protein_id=OAX72338.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 226662 228440 . - . ID=gene-A3216_01085;Name=A3216_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01085 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 226662 228440 . - 0 ID=cds-OAX72339.1;Parent=gene-A3216_01085;Dbxref=NCBI_GP:OAX72339.1;Name=OAX72339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907934.1;locus_tag=A3216_01085;product=hypothetical protein;protein_id=OAX72339.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 229153 229560 . - . ID=gene-A3216_01090;Name=A3216_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01090 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 229153 229560 . - 0 ID=cds-OAX72367.1;Parent=gene-A3216_01090;Dbxref=NCBI_GP:OAX72367.1;Name=OAX72367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907935.1;locus_tag=A3216_01090;product=hypothetical protein;protein_id=OAX72367.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 229634 230437 . - . ID=gene-A3216_01095;Name=A3216_01095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01095;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 229634 230437 . - 0 ID=cds-A3216_01095;Parent=gene-A3216_01095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727249.1;locus_tag=A3216_01095;product=short chain dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 231950 232165 . + . ID=gene-A3216_01100;Name=A3216_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01100 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 231950 232165 . + 0 ID=cds-OAX72368.1;Parent=gene-A3216_01100;Dbxref=NCBI_GP:OAX72368.1;Name=OAX72368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008259699.1;locus_tag=A3216_01100;product=hypothetical protein;protein_id=OAX72368.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 232215 233717 . + . ID=gene-A3216_01105;Name=A3216_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01105 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 232215 233717 . + 0 ID=cds-OAX72340.1;Parent=gene-A3216_01105;Dbxref=NCBI_GP:OAX72340.1;Name=OAX72340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725921.1;locus_tag=A3216_01105;product=ATPase;protein_id=OAX72340.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 233777 234031 . - . ID=gene-A3216_01110;Name=A3216_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01110 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 233777 234031 . - 0 ID=cds-OAX72341.1;Parent=gene-A3216_01110;Dbxref=NCBI_GP:OAX72341.1;Name=OAX72341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907938.1;locus_tag=A3216_01110;product=WhiB family transcriptional regulator;protein_id=OAX72341.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 235318 235839 . + . ID=gene-A3216_01115;Name=A3216_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01115 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 235318 235839 . + 0 ID=cds-OAX72369.1;Parent=gene-A3216_01115;Dbxref=NCBI_GP:OAX72369.1;Name=OAX72369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907939.1;locus_tag=A3216_01115;product=hypothetical protein;protein_id=OAX72369.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 235791 236216 . - . ID=gene-A3216_01120;Name=A3216_01120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01120;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 235791 236216 . - 0 ID=cds-A3216_01120;Parent=gene-A3216_01120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011895517.1;locus_tag=A3216_01120;product=GCN5 family acetyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 236267 237367 . - . ID=gene-A3216_01125;Name=A3216_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01125 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 236267 237367 . - 0 ID=cds-OAX72370.1;Parent=gene-A3216_01125;Dbxref=NCBI_GP:OAX72370.1;Name=OAX72370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393209.1;locus_tag=A3216_01125;product=hypothetical protein;protein_id=OAX72370.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 238206 238903 . + . ID=gene-A3216_01130;Name=A3216_01130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01130;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 238206 238903 . + 0 ID=cds-A3216_01130;Parent=gene-A3216_01130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011740493.1;locus_tag=A3216_01130;product=chromosome partitioning protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 238995 240218 . - . ID=gene-A3216_01135;Name=A3216_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01135 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 238995 240218 . - 0 ID=cds-OAX72342.1;Parent=gene-A3216_01135;Dbxref=NCBI_GP:OAX72342.1;Name=OAX72342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978674.1;locus_tag=A3216_01135;product=hypothetical protein;protein_id=OAX72342.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 240230 241798 . - . ID=gene-A3216_01140;Name=A3216_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01140 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 240230 241798 . - 0 ID=cds-OAX72343.1;Parent=gene-A3216_01140;Dbxref=NCBI_GP:OAX72343.1;Name=OAX72343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003416875.1;locus_tag=A3216_01140;product=DEAD/DEAH box helicase;protein_id=OAX72343.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 242097 242480 . + . ID=gene-A3216_01145;Name=A3216_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01145 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 242097 242480 . + 0 ID=cds-OAX72344.1;Parent=gene-A3216_01145;Dbxref=NCBI_GP:OAX72344.1;Name=OAX72344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01145;product=hypothetical protein;protein_id=OAX72344.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 242820 243407 . - . ID=gene-A3216_01150;Name=A3216_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01150 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 242820 243407 . - 0 ID=cds-OAX72345.1;Parent=gene-A3216_01150;Dbxref=NCBI_GP:OAX72345.1;Name=OAX72345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907943.1;locus_tag=A3216_01150;product=hypothetical protein;protein_id=OAX72345.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 243706 243954 . + . ID=gene-A3216_01155;Name=A3216_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01155 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 243706 243954 . + 0 ID=cds-OAX72346.1;Parent=gene-A3216_01155;Dbxref=NCBI_GP:OAX72346.1;Name=OAX72346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907944.1;locus_tag=A3216_01155;product=ATP-binding protein;protein_id=OAX72346.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 243941 244627 . - . ID=gene-A3216_01160;Name=A3216_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01160 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 243941 244627 . - 0 ID=cds-OAX72371.1;Parent=gene-A3216_01160;Dbxref=NCBI_GP:OAX72371.1;Name=OAX72371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907945.1;locus_tag=A3216_01160;product=TetR family transcriptional regulator;protein_id=OAX72371.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 244814 245839 . + . ID=gene-A3216_01165;Name=A3216_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01165 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 244814 245839 . + 0 ID=cds-OAX72347.1;Parent=gene-A3216_01165;Dbxref=NCBI_GP:OAX72347.1;Name=OAX72347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907946.1;locus_tag=A3216_01165;product=hypothetical protein;protein_id=OAX72347.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 246043 247230 . + . ID=gene-A3216_01170;Name=A3216_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01170 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 246043 247230 . + 0 ID=cds-OAX72348.1;Parent=gene-A3216_01170;Dbxref=NCBI_GP:OAX72348.1;Name=OAX72348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907947.1;locus_tag=A3216_01170;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=OAX72348.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 247324 248178 . + . ID=gene-A3216_01175;Name=A3216_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01175 GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 247324 248178 . + 0 ID=cds-OAX72349.1;Parent=gene-A3216_01175;Dbxref=NCBI_GP:OAX72349.1;Name=OAX72349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712234.1;locus_tag=A3216_01175;product=TIGR02569 family protein;protein_id=OAX72349.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 248269 248563 . - . ID=gene-A3216_01180;Name=A3216_01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01180;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 248269 248563 . - 0 ID=cds-A3216_01180;Parent=gene-A3216_01180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955653.1;locus_tag=A3216_01180;product=DNA methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank gene 248644 248889 . - . ID=gene-A3216_01185;Name=A3216_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01185 GCA_001648835.1|LVXE01000001.1 GeneMarkS+ CDS 248644 248889 . - 0 ID=cds-OAX72350.1;Parent=gene-A3216_01185;Dbxref=NCBI_GP:OAX72350.1;Name=OAX72350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01185;product=hypothetical protein;protein_id=OAX72350.1;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 249894 252997 . + . ID=gene-A3216_01190;Name=A3216_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01190;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 249894 252997 . + 0 ID=cds-A3216_01190;Parent=gene-A3216_01190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383158.1;locus_tag=A3216_01190;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 253027 255963 . + . ID=gene-A3216_01195;Name=A3216_01195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01195;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 253027 255963 . + 0 ID=cds-A3216_01195;Parent=gene-A3216_01195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010949915.1;locus_tag=A3216_01195;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000001.1 Genbank pseudogene 256262 257214 . + . ID=gene-A3216_01200;Name=A3216_01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01200;pseudo=true GCA_001648835.1|LVXE01000001.1 Protein Homology CDS 256262 257214 . + 0 ID=cds-A3216_01200;Parent=gene-A3216_01200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788323.1;locus_tag=A3216_01200;product=potassium transporter Kef;pseudo=true;transl_table=11 ##sequence-region LVXE01000010.1 1 59542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000010.1 Genbank region 1 59542 . + . ID=LVXE01000010.1:1..59542;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000010.1 Genbank gene 251 1705 . - . ID=gene-A3216_04895;Name=A3216_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04895 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 251 1705 . - 0 ID=cds-OAX71533.1;Parent=gene-A3216_04895;Dbxref=NCBI_GP:OAX71533.1;Name=OAX71533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003400120.1;locus_tag=A3216_04895;product=CCA tRNA nucleotidyltransferase;protein_id=OAX71533.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 1898 2653 . + . ID=gene-A3216_04900;Name=A3216_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04900 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 1898 2653 . + 0 ID=cds-OAX71534.1;Parent=gene-A3216_04900;Dbxref=NCBI_GP:OAX71534.1;Name=OAX71534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909039.1;locus_tag=A3216_04900;product=DNA mismatch repair protein MutT;protein_id=OAX71534.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 2650 5043 . + . ID=gene-A3216_04905;Name=A3216_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04905 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 2650 5043 . + 0 ID=cds-OAX71535.1;Parent=gene-A3216_04905;Dbxref=NCBI_GP:OAX71535.1;Name=OAX71535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909040.1;locus_tag=A3216_04905;product=hypothetical protein;protein_id=OAX71535.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 5040 8660 . + . ID=gene-A3216_04910;Name=A3216_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04910 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 5040 8660 . + 0 ID=cds-OAX71536.1;Parent=gene-A3216_04910;Dbxref=NCBI_GP:OAX71536.1;Name=OAX71536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909041.1;locus_tag=A3216_04910;product=murein biosynthesis integral membrane protein MurJ;protein_id=OAX71536.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 9722 9913 . - . ID=gene-A3216_04915;Name=A3216_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04915 GCA_001648835.1|LVXE01000010.1 GeneMarkS+ CDS 9722 9913 . - 0 ID=cds-OAX71537.1;Parent=gene-A3216_04915;Dbxref=NCBI_GP:OAX71537.1;Name=OAX71537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04915;product=hypothetical protein;protein_id=OAX71537.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 10233 11609 . + . ID=gene-A3216_04920;Name=A3216_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04920 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 10233 11609 . + 0 ID=cds-OAX71538.1;Parent=gene-A3216_04920;Dbxref=NCBI_GP:OAX71538.1;Name=OAX71538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46843.1;locus_tag=A3216_04920;product=thioredoxin;protein_id=OAX71538.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 11742 12962 . + . ID=gene-A3216_04925;Name=A3216_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04925 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 11742 12962 . + 0 ID=cds-OAX71539.1;Parent=gene-A3216_04925;Dbxref=NCBI_GP:OAX71539.1;Name=OAX71539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003400168.1;locus_tag=A3216_04925;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OAX71539.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 12959 13738 . - . ID=gene-A3216_04930;Name=A3216_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04930 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 12959 13738 . - 0 ID=cds-OAX71540.1;Parent=gene-A3216_04930;Dbxref=NCBI_GP:OAX71540.1;Name=OAX71540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909044.1;locus_tag=A3216_04930;product=acetyltransferase;protein_id=OAX71540.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 14091 15092 . - . ID=gene-A3216_04935;Name=A3216_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04935 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 14091 15092 . - 0 ID=cds-OAX71541.1;Parent=gene-A3216_04935;Dbxref=NCBI_GP:OAX71541.1;Name=OAX71541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50201.1;locus_tag=A3216_04935;product=chromosome partitioning protein ParB;protein_id=OAX71541.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 15095 15931 . - . ID=gene-A3216_04940;Name=A3216_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04940 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 15095 15931 . - 0 ID=cds-OAX71571.1;Parent=gene-A3216_04940;Dbxref=NCBI_GP:OAX71571.1;Name=OAX71571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003912400.1;locus_tag=A3216_04940;product=chromosome partitioning protein ParA;protein_id=OAX71571.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 16147 16893 . - . ID=gene-A3216_04945;Name=A3216_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04945 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 16147 16893 . - 0 ID=cds-OAX71542.1;Parent=gene-A3216_04945;Dbxref=NCBI_GP:OAX71542.1;Name=OAX71542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8ZTN3.1;locus_tag=A3216_04945;product=16S rRNA (guanine(527)-N(7))-methyltransferase;protein_id=OAX71542.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 16965 17546 . - . ID=gene-A3216_04950;Name=A3216_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04950 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 16965 17546 . - 0 ID=cds-OAX71543.1;Parent=gene-A3216_04950;Dbxref=NCBI_GP:OAX71543.1;Name=OAX71543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008262485.1;locus_tag=A3216_04950;product=single-stranded DNA-binding protein;protein_id=OAX71543.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 17628 18770 . - . ID=gene-A3216_04955;Name=A3216_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04955 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 17628 18770 . - 0 ID=cds-OAX71544.1;Parent=gene-A3216_04955;Dbxref=NCBI_GP:OAX71544.1;Name=OAX71544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50205.2;locus_tag=A3216_04955;product=membrane protein insertase YidC;protein_id=OAX71544.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 19109 19471 . - . ID=gene-A3216_04960;Name=A3216_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04960 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 19109 19471 . - 0 ID=cds-OAX71545.1;Parent=gene-A3216_04960;Dbxref=NCBI_GP:OAX71545.1;Name=OAX71545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46610.1;locus_tag=A3216_04960;product=ribonuclease P protein component;protein_id=OAX71545.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 19493 19636 . - . ID=gene-A3216_04965;Name=A3216_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04965 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 19493 19636 . - 0 ID=cds-OAX71572.1;Parent=gene-A3216_04965;Dbxref=NCBI_GP:OAX71572.1;Name=OAX71572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003890928.1;locus_tag=A3216_04965;product=50S ribosomal protein L34;protein_id=OAX71572.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 19802 20053 . + . ID=gene-A3216_04970;Name=A3216_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04970 GCA_001648835.1|LVXE01000010.1 GeneMarkS+ CDS 19802 20053 . + 0 ID=cds-OAX71546.1;Parent=gene-A3216_04970;Dbxref=NCBI_GP:OAX71546.1;Name=OAX71546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04970;product=hypothetical protein;protein_id=OAX71546.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 20244 21752 . + . ID=gene-A3216_04975;Name=A3216_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04975 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 20244 21752 . + 0 ID=cds-OAX71573.1;Parent=gene-A3216_04975;Dbxref=NCBI_GP:OAX71573.1;Name=OAX71573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007769784.1;locus_tag=A3216_04975;product=chromosomal replication initiation protein DnaA;protein_id=OAX71573.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 22267 23466 . + . ID=gene-A3216_04980;Name=A3216_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04980 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 22267 23466 . + 0 ID=cds-OAX71547.1;Parent=gene-A3216_04980;Dbxref=NCBI_GP:OAX71547.1;Name=OAX71547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014210245.1;locus_tag=A3216_04980;product=DNA polymerase III subunit beta;protein_id=OAX71547.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 23467 24624 . + . ID=gene-A3216_04985;Name=A3216_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04985 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 23467 24624 . + 0 ID=cds-OAX71548.1;Parent=gene-A3216_04985;Dbxref=NCBI_GP:OAX71548.1;Name=OAX71548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46391.3;locus_tag=A3216_04985;product=DNA replication/repair protein RecF;protein_id=OAX71548.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 24621 25190 . + . ID=gene-A3216_04990;Name=A3216_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04990 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 24621 25190 . + 0 ID=cds-OAX71549.1;Parent=gene-A3216_04990;Dbxref=NCBI_GP:OAX71549.1;Name=OAX71549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDF4.1;locus_tag=A3216_04990;product=hypothetical protein;protein_id=OAX71549.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 25415 27451 . + . ID=gene-A3216_04995;Name=A3216_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04995 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 25415 27451 . + 0 ID=cds-OAX71574.1;Parent=gene-A3216_04995;Dbxref=NCBI_GP:OAX71574.1;Name=OAX71574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011777331.1;locus_tag=A3216_04995;product=DNA gyrase subunit B;protein_id=OAX71574.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 27504 31253 . + . ID=gene-A3216_05000;Name=A3216_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05000 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 27504 31253 . + 0 ID=cds-OAX71550.1;Parent=gene-A3216_05000;Dbxref=NCBI_GP:OAX71550.1;Name=OAX71550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634405.1;locus_tag=A3216_05000;product=DNA gyrase subunit A;protein_id=OAX71550.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 31381 32292 . + . ID=gene-A3216_05005;Name=A3216_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05005 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 31381 32292 . + 0 ID=cds-OAX71551.1;Parent=gene-A3216_05005;Dbxref=NCBI_GP:OAX71551.1;Name=OAX71551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32870.1;locus_tag=A3216_05005;product=hypothetical protein;protein_id=OAX71551.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 32380 32456 . + . ID=gene-A3216_05010;Name=A3216_05010;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_05010 GCA_001648835.1|LVXE01000010.1 tRNAscan-SE tRNA 32380 32456 . + . ID=rna-A3216_05010;Parent=gene-A3216_05010;anticodon=(pos:32414..32416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05010;product=tRNA-Ile GCA_001648835.1|LVXE01000010.1 tRNAscan-SE exon 32380 32456 . + . ID=exon-A3216_05010-1;Parent=rna-A3216_05010;anticodon=(pos:32414..32416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05010;product=tRNA-Ile GCA_001648835.1|LVXE01000010.1 Genbank gene 32590 32665 . + . ID=gene-A3216_05015;Name=A3216_05015;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_05015 GCA_001648835.1|LVXE01000010.1 tRNAscan-SE tRNA 32590 32665 . + . ID=rna-A3216_05015;Parent=gene-A3216_05015;anticodon=(pos:32623..32625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05015;product=tRNA-Ala GCA_001648835.1|LVXE01000010.1 tRNAscan-SE exon 32590 32665 . + . ID=exon-A3216_05015-1;Parent=rna-A3216_05015;anticodon=(pos:32623..32625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05015;product=tRNA-Ala GCA_001648835.1|LVXE01000010.1 Genbank gene 33055 33429 . - . ID=gene-A3216_05020;Name=A3216_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05020 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 33055 33429 . - 0 ID=cds-OAX71552.1;Parent=gene-A3216_05020;Dbxref=NCBI_GP:OAX71552.1;Name=OAX71552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907461.1;locus_tag=A3216_05020;product=hypothetical protein;protein_id=OAX71552.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 33974 34165 . + . ID=gene-A3216_05025;Name=A3216_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05025 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 33974 34165 . + 0 ID=cds-OAX71553.1;Parent=gene-A3216_05025;Dbxref=NCBI_GP:OAX71553.1;Name=OAX71553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907462.1;locus_tag=A3216_05025;product=hypothetical protein;protein_id=OAX71553.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 36192 36740 . + . ID=gene-A3216_05030;Name=A3216_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05030 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 36192 36740 . + 0 ID=cds-OAX71554.1;Parent=gene-A3216_05030;Dbxref=NCBI_GP:OAX71554.1;Name=OAX71554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015353888.1;locus_tag=A3216_05030;product=peptidylprolyl isomerase;protein_id=OAX71554.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 36765 37178 . - . ID=gene-A3216_05035;Name=A3216_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05035 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 36765 37178 . - 0 ID=cds-OAX71555.1;Parent=gene-A3216_05035;Dbxref=NCBI_GP:OAX71555.1;Name=OAX71555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907464.1;locus_tag=A3216_05035;product=hypothetical protein;protein_id=OAX71555.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 37333 37614 . - . ID=gene-A3216_05040;Name=A3216_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05040 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 37333 37614 . - 0 ID=cds-OAX71575.1;Parent=gene-A3216_05040;Dbxref=NCBI_GP:OAX71575.1;Name=OAX71575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003905205.1;locus_tag=A3216_05040;product=cell division protein CrgA;protein_id=OAX71575.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank pseudogene 37721 38485 . + . ID=gene-A3216_05045;Name=A3216_05045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05045;pseudo=true GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 37721 38485 . + 0 ID=cds-A3216_05045;Parent=gene-A3216_05045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012392021.1;locus_tag=A3216_05045;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 38524 39222 . + . ID=gene-A3216_05050;Name=A3216_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05050 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 38524 39222 . + 0 ID=cds-OAX71556.1;Parent=gene-A3216_05050;Dbxref=NCBI_GP:OAX71556.1;Name=OAX71556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907466.1;locus_tag=A3216_05050;product=anthranilate synthase component II;protein_id=OAX71556.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 39200 41068 . - . ID=gene-A3216_05055;Name=A3216_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05055 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 39200 41068 . - 0 ID=cds-OAX71557.1;Parent=gene-A3216_05055;Dbxref=NCBI_GP:OAX71557.1;Name=OAX71557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020731191.1;locus_tag=A3216_05055;product=serine/threonine protein kinase;protein_id=OAX71557.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 41078 42391 . - . ID=gene-A3216_05060;Name=A3216_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05060 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 41078 42391 . - 0 ID=cds-OAX71558.1;Parent=gene-A3216_05060;Dbxref=NCBI_GP:OAX71558.1;Name=OAX71558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54743.3;locus_tag=A3216_05060;product=serine/threonine protein kinase;protein_id=OAX71558.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 42388 43866 . - . ID=gene-A3216_05065;Name=A3216_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05065 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 42388 43866 . - 0 ID=cds-OAX71559.1;Parent=gene-A3216_05065;Dbxref=NCBI_GP:OAX71559.1;Name=OAX71559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018602957.1;locus_tag=A3216_05065;product=penicillin-binding protein;protein_id=OAX71559.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 43863 45260 . - . ID=gene-A3216_05070;Name=A3216_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05070 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 43863 45260 . - 0 ID=cds-OAX71560.1;Parent=gene-A3216_05070;Dbxref=NCBI_GP:OAX71560.1;Name=OAX71560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872104.1;locus_tag=A3216_05070;product=cell division protein FtsW;protein_id=OAX71560.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 45257 46786 . - . ID=gene-A3216_05075;Name=A3216_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05075 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 45257 46786 . - 0 ID=cds-OAX71561.1;Parent=gene-A3216_05075;Dbxref=NCBI_GP:OAX71561.1;Name=OAX71561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907471.1;locus_tag=A3216_05075;product=serine/threonine protein phosphatase;protein_id=OAX71561.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 46783 47250 . - . ID=gene-A3216_05080;Name=A3216_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05080 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 46783 47250 . - 0 ID=cds-OAX71562.1;Parent=gene-A3216_05080;Dbxref=NCBI_GP:OAX71562.1;Name=OAX71562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003883293.1;locus_tag=A3216_05080;product=hypothetical protein;protein_id=OAX71562.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 47372 48838 . - . ID=gene-A3216_05085;Name=A3216_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05085 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 47372 48838 . - 0 ID=cds-OAX71563.1;Parent=gene-A3216_05085;Dbxref=NCBI_GP:OAX71563.1;Name=OAX71563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907473.1;locus_tag=A3216_05085;product=hypothetical protein;protein_id=OAX71563.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 49089 49171 . + . ID=gene-A3216_05090;Name=A3216_05090;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_05090 GCA_001648835.1|LVXE01000010.1 tRNAscan-SE tRNA 49089 49171 . + . ID=rna-A3216_05090;Parent=gene-A3216_05090;anticodon=(pos:49122..49124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05090;product=tRNA-Leu GCA_001648835.1|LVXE01000010.1 tRNAscan-SE exon 49089 49171 . + . ID=exon-A3216_05090-1;Parent=rna-A3216_05090;anticodon=(pos:49122..49124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05090;product=tRNA-Leu GCA_001648835.1|LVXE01000010.1 Genbank gene 49974 50225 . + . ID=gene-A3216_05095;Name=A3216_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05095 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 49974 50225 . + 0 ID=cds-OAX71564.1;Parent=gene-A3216_05095;Dbxref=NCBI_GP:OAX71564.1;Name=OAX71564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907475.1;locus_tag=A3216_05095;product=hypothetical protein;protein_id=OAX71564.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 50492 50782 . - . ID=gene-A3216_05100;Name=A3216_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05100 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 50492 50782 . - 0 ID=cds-OAX71565.1;Parent=gene-A3216_05100;Dbxref=NCBI_GP:OAX71565.1;Name=OAX71565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907476.1;locus_tag=A3216_05100;product=hypothetical protein;protein_id=OAX71565.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 51795 52094 . + . ID=gene-A3216_05105;Name=A3216_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05105 GCA_001648835.1|LVXE01000010.1 GeneMarkS+ CDS 51795 52094 . + 0 ID=cds-OAX71566.1;Parent=gene-A3216_05105;Dbxref=NCBI_GP:OAX71566.1;Name=OAX71566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05105;product=hypothetical protein;protein_id=OAX71566.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 52741 52941 . - . ID=gene-A3216_05110;Name=A3216_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05110 GCA_001648835.1|LVXE01000010.1 GeneMarkS+ CDS 52741 52941 . - 0 ID=cds-OAX71567.1;Parent=gene-A3216_05110;Dbxref=NCBI_GP:OAX71567.1;Name=OAX71567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05110;product=hypothetical protein;protein_id=OAX71567.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 53299 53904 . + . ID=gene-A3216_05115;Name=A3216_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05115 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 53299 53904 . + 0 ID=cds-OAX71576.1;Parent=gene-A3216_05115;Dbxref=NCBI_GP:OAX71576.1;Name=OAX71576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907477.1;locus_tag=A3216_05115;product=hypothetical protein;protein_id=OAX71576.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 54232 54837 . - . ID=gene-A3216_05120;Name=A3216_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05120 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 54232 54837 . - 0 ID=cds-OAX71568.1;Parent=gene-A3216_05120;Dbxref=NCBI_GP:OAX71568.1;Name=OAX71568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907478.1;locus_tag=A3216_05120;product=hypothetical protein;protein_id=OAX71568.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 54949 55290 . - . ID=gene-A3216_05125;Name=A3216_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05125 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 54949 55290 . - 0 ID=cds-OAX71569.1;Parent=gene-A3216_05125;Dbxref=NCBI_GP:OAX71569.1;Name=OAX71569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32871.1;locus_tag=A3216_05125;product=hypothetical protein;protein_id=OAX71569.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 55486 56322 . - . ID=gene-A3216_05130;Name=A3216_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05130 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 55486 56322 . - 0 ID=cds-OAX71570.1;Parent=gene-A3216_05130;Dbxref=NCBI_GP:OAX71570.1;Name=OAX71570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33075.1;locus_tag=A3216_05130;product=hypothetical protein;protein_id=OAX71570.1;transl_table=11 GCA_001648835.1|LVXE01000010.1 Genbank gene 56520 59438 . + . ID=gene-A3216_05135;Name=A3216_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05135 GCA_001648835.1|LVXE01000010.1 Protein Homology CDS 56520 59438 . + 0 ID=cds-OAX71577.1;Parent=gene-A3216_05135;Dbxref=NCBI_GP:OAX71577.1;Name=OAX71577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50192.2;locus_tag=A3216_05135;product=leucine--tRNA ligase;protein_id=OAX71577.1;transl_table=11 ##sequence-region LVXE01000099.1 1 3380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000099.1 Genbank region 1 3380 . + . ID=LVXE01000099.1:1..3380;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000099.1 Genbank gene 266 574 . + . ID=gene-A3216_14140;Name=A3216_14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14140 GCA_001648835.1|LVXE01000099.1 Protein Homology CDS 266 574 . + 0 ID=cds-OAX70080.1;Parent=gene-A3216_14140;Dbxref=NCBI_GP:OAX70080.1;Name=OAX70080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908033.1;locus_tag=A3216_14140;product=hypothetical protein;protein_id=OAX70080.1;transl_table=11 GCA_001648835.1|LVXE01000099.1 Genbank gene 666 1034 . + . ID=gene-A3216_14145;Name=A3216_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14145 GCA_001648835.1|LVXE01000099.1 Protein Homology CDS 666 1034 . + 0 ID=cds-OAX70081.1;Parent=gene-A3216_14145;Dbxref=NCBI_GP:OAX70081.1;Name=OAX70081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908032.1;locus_tag=A3216_14145;product=hypothetical protein;protein_id=OAX70081.1;transl_table=11 GCA_001648835.1|LVXE01000099.1 Genbank gene 1286 2722 . - . ID=gene-A3216_14150;Name=A3216_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14150 GCA_001648835.1|LVXE01000099.1 Protein Homology CDS 1286 2722 . - 0 ID=cds-OAX70082.1;Parent=gene-A3216_14150;Dbxref=NCBI_GP:OAX70082.1;Name=OAX70082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018599465.1;locus_tag=A3216_14150;product=type I glutamate--ammonia ligase;protein_id=OAX70082.1;transl_table=11 ##sequence-region LVXE01000100.1 1 3218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000100.1 Genbank region 1 3218 . + . ID=LVXE01000100.1:1..3218;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000100.1 Genbank gene 1 1482 . - . ID=gene-A3216_14155;Name=A3216_14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14155;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000100.1 Protein Homology CDS 1 1482 . - 0 ID=cds-OAX70078.1;Parent=gene-A3216_14155;Dbxref=NCBI_GP:OAX70078.1;Name=OAX70078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953407.1;locus_tag=A3216_14155;partial=true;product=L-asparagine permease;protein_id=OAX70078.1;start_range=.,1;transl_table=11 GCA_001648835.1|LVXE01000100.1 Genbank gene 1632 3149 . - . ID=gene-A3216_14160;Name=A3216_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14160 GCA_001648835.1|LVXE01000100.1 Protein Homology CDS 1632 3149 . - 0 ID=cds-OAX70079.1;Parent=gene-A3216_14160;Dbxref=NCBI_GP:OAX70079.1;Name=OAX70079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908259.1;locus_tag=A3216_14160;product=L-asparagine permease;protein_id=OAX70079.1;transl_table=11 ##sequence-region LVXE01000101.1 1 3010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000101.1 Genbank region 1 3010 . + . ID=LVXE01000101.1:1..3010;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000101.1 Genbank gene 94 2817 . + . ID=gene-A3216_14165;Name=A3216_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14165 GCA_001648835.1|LVXE01000101.1 Protein Homology CDS 94 2817 . + 0 ID=cds-OAX70077.1;Parent=gene-A3216_14165;Dbxref=NCBI_GP:OAX70077.1;Name=OAX70077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007776140.1;locus_tag=A3216_14165;product=DNA polymerase I;protein_id=OAX70077.1;transl_table=11 ##sequence-region LVXE01000102.1 1 2832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000102.1 Genbank region 1 2832 . + . ID=LVXE01000102.1:1..2832;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000102.1 Genbank gene 494 730 . + . ID=gene-A3216_14170;Name=A3216_14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14170 GCA_001648835.1|LVXE01000102.1 GeneMarkS+ CDS 494 730 . + 0 ID=cds-OAX70075.1;Parent=gene-A3216_14170;Dbxref=NCBI_GP:OAX70075.1;Name=OAX70075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14170;product=hypothetical protein;protein_id=OAX70075.1;transl_table=11 GCA_001648835.1|LVXE01000102.1 Genbank gene 2123 2452 . + . ID=gene-A3216_14175;Name=A3216_14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14175 GCA_001648835.1|LVXE01000102.1 GeneMarkS+ CDS 2123 2452 . + 0 ID=cds-OAX70076.1;Parent=gene-A3216_14175;Dbxref=NCBI_GP:OAX70076.1;Name=OAX70076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14175;product=hypothetical protein;protein_id=OAX70076.1;transl_table=11 ##sequence-region LVXE01000103.1 1 2773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000103.1 Genbank region 1 2773 . + . ID=LVXE01000103.1:1..2773;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000103.1 Genbank pseudogene 1363 2648 . + . ID=gene-A3216_14180;Name=A3216_14180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14180;pseudo=true GCA_001648835.1|LVXE01000103.1 Protein Homology CDS 1363 2648 . + 0 ID=cds-A3216_14180;Parent=gene-A3216_14180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011799114.1;locus_tag=A3216_14180;product=phosphoribosyl transferase;pseudo=true;transl_table=11 ##sequence-region LVXE01000104.1 1 2544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000104.1 Genbank region 1 2544 . + . ID=LVXE01000104.1:1..2544;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000104.1 Genbank gene 28 315 . - . ID=gene-A3216_14185;Name=A3216_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14185 GCA_001648835.1|LVXE01000104.1 Protein Homology CDS 28 315 . - 0 ID=cds-OAX70071.1;Parent=gene-A3216_14185;Dbxref=NCBI_GP:OAX70071.1;Name=OAX70071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49946.1;locus_tag=A3216_14185;product=type VII secretion protein EsxI;protein_id=OAX70071.1;transl_table=11 GCA_001648835.1|LVXE01000104.1 Genbank gene 367 669 . - . ID=gene-A3216_14190;Name=A3216_14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14190 GCA_001648835.1|LVXE01000104.1 Protein Homology CDS 367 669 . - 0 ID=cds-OAX70072.1;Parent=gene-A3216_14190;Dbxref=NCBI_GP:OAX70072.1;Name=OAX70072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49945.1;locus_tag=A3216_14190;product=ESAT-6-like protein Y;protein_id=OAX70072.1;transl_table=11 GCA_001648835.1|LVXE01000104.1 Genbank gene 732 1985 . - . ID=gene-A3216_14195;Name=A3216_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14195 GCA_001648835.1|LVXE01000104.1 Protein Homology CDS 732 1985 . - 0 ID=cds-OAX70073.1;Parent=gene-A3216_14195;Dbxref=NCBI_GP:OAX70073.1;Name=OAX70073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014000724.1;locus_tag=A3216_14195;product=hypothetical protein;protein_id=OAX70073.1;transl_table=11 GCA_001648835.1|LVXE01000104.1 Genbank gene 2042 2341 . - . ID=gene-A3216_14200;Name=A3216_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14200 GCA_001648835.1|LVXE01000104.1 Protein Homology CDS 2042 2341 . - 0 ID=cds-OAX70074.1;Parent=gene-A3216_14200;Dbxref=NCBI_GP:OAX70074.1;Name=OAX70074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908098.1;locus_tag=A3216_14200;product=hypothetical protein;protein_id=OAX70074.1;transl_table=11 ##sequence-region LVXE01000105.1 1 1669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000105.1 Genbank region 1 1669 . + . ID=LVXE01000105.1:1..1669;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000105.1 Genbank pseudogene 1 760 . + . ID=gene-A3216_14205;Name=A3216_14205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14205;pseudo=true GCA_001648835.1|LVXE01000105.1 Protein Homology CDS 1 760 . + 0 ID=cds-A3216_14205;Parent=gene-A3216_14205;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768317.1;locus_tag=A3216_14205;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000105.1 Genbank gene 884 1669 . - . ID=gene-A3216_14210;Name=A3216_14210;end_range=1669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14210;partial=true GCA_001648835.1|LVXE01000105.1 Protein Homology CDS 884 1669 . - 0 ID=cds-OAX70070.1;Parent=gene-A3216_14210;Dbxref=NCBI_GP:OAX70070.1;Name=OAX70070.1;end_range=1669,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908913.1;locus_tag=A3216_14210;partial=true;product=SAM-dependent methyltransferase;protein_id=OAX70070.1;transl_table=11 ##sequence-region LVXE01000011.1 1 59307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000011.1 Genbank region 1 59307 . + . ID=LVXE01000011.1:1..59307;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000011.1 Genbank gene 637 837 . - . ID=gene-A3216_05140;Name=A3216_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05140 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 637 837 . - 0 ID=cds-OAX71490.1;Parent=gene-A3216_05140;Dbxref=NCBI_GP:OAX71490.1;Name=OAX71490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05140;product=hypothetical protein;protein_id=OAX71490.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 2245 2317 . + . ID=gene-A3216_05145;Name=A3216_05145;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_05145 GCA_001648835.1|LVXE01000011.1 tRNAscan-SE tRNA 2245 2317 . + . ID=rna-A3216_05145;Parent=gene-A3216_05145;anticodon=(pos:2278..2280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05145;product=tRNA-Arg GCA_001648835.1|LVXE01000011.1 tRNAscan-SE exon 2245 2317 . + . ID=exon-A3216_05145-1;Parent=rna-A3216_05145;anticodon=(pos:2278..2280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_05145;product=tRNA-Arg GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 2621 3139 . - . ID=gene-A3216_05150;Name=A3216_05150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05150;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 2621 3139 . - 0 ID=cds-A3216_05150;Parent=gene-A3216_05150;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015626999.1;locus_tag=A3216_05150;product=GCN5 family acetyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 3629 3991 . + . ID=gene-A3216_05155;Name=A3216_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05155 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 3629 3991 . + 0 ID=cds-OAX71491.1;Parent=gene-A3216_05155;Dbxref=NCBI_GP:OAX71491.1;Name=OAX71491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05155;product=hypothetical protein;protein_id=OAX71491.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 5955 6191 . + . ID=gene-A3216_05160;Name=A3216_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05160 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 5955 6191 . + 0 ID=cds-OAX71492.1;Parent=gene-A3216_05160;Dbxref=NCBI_GP:OAX71492.1;Name=OAX71492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05160;product=hypothetical protein;protein_id=OAX71492.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 6506 7979 . + . ID=gene-A3216_05165;Name=A3216_05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05165;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 6506 7979 . + 0 ID=cds-A3216_05165;Parent=gene-A3216_05165;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003897016.1;locus_tag=A3216_05165;product=apocarotenoid-15%2C15'-oxygenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 8183 8617 . - . ID=gene-A3216_05170;Name=A3216_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05170 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 8183 8617 . - 0 ID=cds-OAX71493.1;Parent=gene-A3216_05170;Dbxref=NCBI_GP:OAX71493.1;Name=OAX71493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908717.1;locus_tag=A3216_05170;product=hypothetical protein;protein_id=OAX71493.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 8676 9444 . - . ID=gene-A3216_05175;Name=A3216_05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05175;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 8676 9444 . - 0 ID=cds-A3216_05175;Parent=gene-A3216_05175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015302721.1;locus_tag=A3216_05175;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 9504 10049 . - . ID=gene-A3216_05180;Name=A3216_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05180 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 9504 10049 . - 0 ID=cds-OAX71494.1;Parent=gene-A3216_05180;Dbxref=NCBI_GP:OAX71494.1;Name=OAX71494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908718.1;locus_tag=A3216_05180;product=toxin;protein_id=OAX71494.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 10046 10216 . - . ID=gene-A3216_05185;Name=A3216_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05185 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 10046 10216 . - 0 ID=cds-OAX71495.1;Parent=gene-A3216_05185;Dbxref=NCBI_GP:OAX71495.1;Name=OAX71495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011738542.1;locus_tag=A3216_05185;product=hypothetical protein;protein_id=OAX71495.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 10322 12332 . - . ID=gene-A3216_05190;Name=A3216_05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05190;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 10322 12332 . - 0 ID=cds-A3216_05190;Parent=gene-A3216_05190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003897043.1;locus_tag=A3216_05190;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 12533 12808 . - . ID=gene-A3216_05195;Name=A3216_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05195 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 12533 12808 . - 0 ID=cds-OAX71496.1;Parent=gene-A3216_05195;Dbxref=NCBI_GP:OAX71496.1;Name=OAX71496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05195;product=hypothetical protein;protein_id=OAX71496.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 13283 14361 . - . ID=gene-A3216_05200;Name=A3216_05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05200;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 13283 14361 . - 0 ID=cds-A3216_05200;Parent=gene-A3216_05200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020786051.1;locus_tag=A3216_05200;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 14404 15147 . - . ID=gene-A3216_05205;Name=A3216_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05205 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 14404 15147 . - 0 ID=cds-OAX71497.1;Parent=gene-A3216_05205;Dbxref=NCBI_GP:OAX71497.1;Name=OAX71497.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P64015.1;locus_tag=A3216_05205;product=enoyl-CoA hydratase;protein_id=OAX71497.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 15174 16495 . + . ID=gene-A3216_05210;Name=A3216_05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05210;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 15174 16495 . + 0 ID=cds-A3216_05210;Parent=gene-A3216_05210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020786050.1;locus_tag=A3216_05210;product=acetyl-CoA carboxyl transferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 16600 16827 . + . ID=gene-A3216_05215;Name=A3216_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05215 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 16600 16827 . + 0 ID=cds-OAX71498.1;Parent=gene-A3216_05215;Dbxref=NCBI_GP:OAX71498.1;Name=OAX71498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05215;product=hypothetical protein;protein_id=OAX71498.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 16903 17082 . - . ID=gene-A3216_05220;Name=A3216_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05220 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 16903 17082 . - 0 ID=cds-OAX71499.1;Parent=gene-A3216_05220;Dbxref=NCBI_GP:OAX71499.1;Name=OAX71499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05220;product=hypothetical protein;protein_id=OAX71499.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 17174 17584 . - . ID=gene-A3216_05225;Name=A3216_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05225 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 17174 17584 . - 0 ID=cds-OAX71500.1;Parent=gene-A3216_05225;Dbxref=NCBI_GP:OAX71500.1;Name=OAX71500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908721.1;locus_tag=A3216_05225;product=hypothetical protein;protein_id=OAX71500.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 18535 18843 . + . ID=gene-A3216_05230;Name=A3216_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05230 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 18535 18843 . + 0 ID=cds-OAX71501.1;Parent=gene-A3216_05230;Dbxref=NCBI_GP:OAX71501.1;Name=OAX71501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05230;product=hypothetical protein;protein_id=OAX71501.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 19341 19553 . - . ID=gene-A3216_05235;Name=A3216_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05235 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 19341 19553 . - 0 ID=cds-OAX71502.1;Parent=gene-A3216_05235;Dbxref=NCBI_GP:OAX71502.1;Name=OAX71502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05235;product=hypothetical protein;protein_id=OAX71502.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 19784 20485 . + . ID=gene-A3216_05240;Name=A3216_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05240 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 19784 20485 . + 0 ID=cds-OAX71503.1;Parent=gene-A3216_05240;Dbxref=NCBI_GP:OAX71503.1;Name=OAX71503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908722.1;locus_tag=A3216_05240;product=DNA-binding response regulator;protein_id=OAX71503.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 20503 21843 . + . ID=gene-A3216_05245;Name=A3216_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05245 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 20503 21843 . + 0 ID=cds-OAX71504.1;Parent=gene-A3216_05245;Dbxref=NCBI_GP:OAX71504.1;Name=OAX71504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33071.1;locus_tag=A3216_05245;product=two-component sensor histidine kinase;protein_id=OAX71504.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 21868 22269 . - . ID=gene-A3216_05250;Name=A3216_05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05250;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 21868 22269 . - 0 ID=cds-A3216_05250;Parent=gene-A3216_05250;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015629745.1;locus_tag=A3216_05250;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 22441 23437 . - . ID=gene-A3216_05255;Name=A3216_05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05255;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 22441 23437 . - 0 ID=cds-A3216_05255;Parent=gene-A3216_05255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003915129.1;locus_tag=A3216_05255;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 23730 25101 . + . ID=gene-A3216_05260;Name=A3216_05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05260;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 23730 25101 . + 0 ID=cds-A3216_05260;Parent=gene-A3216_05260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011723896.1;locus_tag=A3216_05260;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 25467 25808 . - . ID=gene-A3216_05265;Name=A3216_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05265 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 25467 25808 . - 0 ID=cds-OAX71505.1;Parent=gene-A3216_05265;Dbxref=NCBI_GP:OAX71505.1;Name=OAX71505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05265;product=hypothetical protein;protein_id=OAX71505.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 25966 26175 . - . ID=gene-A3216_05270;Name=A3216_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05270 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 25966 26175 . - 0 ID=cds-OAX71506.1;Parent=gene-A3216_05270;Dbxref=NCBI_GP:OAX71506.1;Name=OAX71506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05270;product=hypothetical protein;protein_id=OAX71506.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 26321 26482 . - . ID=gene-A3216_05275;Name=A3216_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05275 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 26321 26482 . - 0 ID=cds-OAX71529.1;Parent=gene-A3216_05275;Dbxref=NCBI_GP:OAX71529.1;Name=OAX71529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908724.1;locus_tag=A3216_05275;product=PbsX family transcriptional regulator;protein_id=OAX71529.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 27248 28543 . - . ID=gene-A3216_05280;Name=A3216_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05280 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 27248 28543 . - 0 ID=cds-OAX71507.1;Parent=gene-A3216_05280;Dbxref=NCBI_GP:OAX71507.1;Name=OAX71507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009188691.1;locus_tag=A3216_05280;product=citrate (Si)-synthase;protein_id=OAX71507.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 28792 29418 . - . ID=gene-A3216_05285;Name=A3216_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05285 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 28792 29418 . - 0 ID=cds-OAX71530.1;Parent=gene-A3216_05285;Dbxref=NCBI_GP:OAX71530.1;Name=OAX71530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872896.1;locus_tag=A3216_05285;product=pyridoxamine 5'-phosphate oxidase;protein_id=OAX71530.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 29593 30650 . + . ID=gene-A3216_05290;Name=A3216_05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05290;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 29593 30650 . + 0 ID=cds-A3216_05290;Parent=gene-A3216_05290;Note=forms citrate from oxaloacetate and acetyl-CoA%3B functions in TCA cycle%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005065937.1;locus_tag=A3216_05290;product=citrate synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 30986 31436 . + . ID=gene-A3216_05295;Name=A3216_05295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05295;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 30986 31436 . + 0 ID=cds-A3216_05295;Parent=gene-A3216_05295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015292510.1;locus_tag=A3216_05295;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 31447 33114 . - . ID=gene-A3216_05300;Name=A3216_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05300 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 31447 33114 . - 0 ID=cds-OAX71508.1;Parent=gene-A3216_05300;Dbxref=NCBI_GP:OAX71508.1;Name=OAX71508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33064.1;locus_tag=A3216_05300;product=ferredoxin;protein_id=OAX71508.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 33130 34155 . - . ID=gene-A3216_05305;Name=A3216_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05305 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 33130 34155 . - 0 ID=cds-OAX71531.1;Parent=gene-A3216_05305;Dbxref=NCBI_GP:OAX71531.1;Name=OAX71531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009957570.1;locus_tag=A3216_05305;product=hypothetical protein;protein_id=OAX71531.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 34369 35499 . + . ID=gene-A3216_05310;Name=A3216_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05310 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 34369 35499 . + 0 ID=cds-OAX71532.1;Parent=gene-A3216_05310;Dbxref=NCBI_GP:OAX71532.1;Name=OAX71532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P63515.1;locus_tag=A3216_05310;product=phosphoserine aminotransferase;protein_id=OAX71532.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 35617 36372 . + . ID=gene-A3216_05315;Name=A3216_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05315 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 35617 36372 . + 0 ID=cds-OAX71509.1;Parent=gene-A3216_05315;Dbxref=NCBI_GP:OAX71509.1;Name=OAX71509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908730.1;locus_tag=A3216_05315;product=hypothetical protein;protein_id=OAX71509.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 37099 37320 . - . ID=gene-A3216_05320;Name=A3216_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05320 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 37099 37320 . - 0 ID=cds-OAX71510.1;Parent=gene-A3216_05320;Dbxref=NCBI_GP:OAX71510.1;Name=OAX71510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05320;product=hypothetical protein;protein_id=OAX71510.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 37317 37622 . - . ID=gene-A3216_05325;Name=A3216_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05325 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 37317 37622 . - 0 ID=cds-OAX71511.1;Parent=gene-A3216_05325;Dbxref=NCBI_GP:OAX71511.1;Name=OAX71511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05325;product=hypothetical protein;protein_id=OAX71511.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 37619 38050 . - . ID=gene-A3216_05330;Name=A3216_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05330 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 37619 38050 . - 0 ID=cds-OAX71512.1;Parent=gene-A3216_05330;Dbxref=NCBI_GP:OAX71512.1;Name=OAX71512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872905.1;locus_tag=A3216_05330;product=MarR family transcriptional regulator;protein_id=OAX71512.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 38254 38529 . + . ID=gene-A3216_05335;Name=A3216_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05335 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 38254 38529 . + 0 ID=cds-OAX71513.1;Parent=gene-A3216_05335;Dbxref=NCBI_GP:OAX71513.1;Name=OAX71513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908732.1;locus_tag=A3216_05335;product=hypothetical protein;protein_id=OAX71513.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 38641 39450 . - . ID=gene-A3216_05340;Name=A3216_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05340 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 38641 39450 . - 0 ID=cds-OAX71514.1;Parent=gene-A3216_05340;Dbxref=NCBI_GP:OAX71514.1;Name=OAX71514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908733.1;locus_tag=A3216_05340;product=hypothetical protein;protein_id=OAX71514.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 39560 41299 . + . ID=gene-A3216_05345;Name=A3216_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05345 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 39560 41299 . + 0 ID=cds-OAX71515.1;Parent=gene-A3216_05345;Dbxref=NCBI_GP:OAX71515.1;Name=OAX71515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33057.1;locus_tag=A3216_05345;product=hypothetical protein;protein_id=OAX71515.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 41307 41795 . + . ID=gene-A3216_05350;Name=A3216_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05350 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 41307 41795 . + 0 ID=cds-OAX71516.1;Parent=gene-A3216_05350;Dbxref=NCBI_GP:OAX71516.1;Name=OAX71516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908735.1;locus_tag=A3216_05350;product=hypothetical protein;protein_id=OAX71516.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 42924 44393 . + . ID=gene-A3216_05355;Name=A3216_05355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05355;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 42924 44393 . + 0 ID=cds-A3216_05355;Parent=gene-A3216_05355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007727675.1;locus_tag=A3216_05355;product=D-serine/D-alanine/glycine transporter;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 44683 46326 . - . ID=gene-A3216_05360;Name=A3216_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05360;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 44683 46326 . - 0 ID=cds-A3216_05360;Parent=gene-A3216_05360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003907502.1;locus_tag=A3216_05360;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 47173 47460 . - . ID=gene-A3216_05365;Name=A3216_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05365 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 47173 47460 . - 0 ID=cds-OAX71517.1;Parent=gene-A3216_05365;Dbxref=NCBI_GP:OAX71517.1;Name=OAX71517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05365;product=hypothetical protein;protein_id=OAX71517.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 47645 48055 . - . ID=gene-A3216_05370;Name=A3216_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05370 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 47645 48055 . - 0 ID=cds-OAX71518.1;Parent=gene-A3216_05370;Dbxref=NCBI_GP:OAX71518.1;Name=OAX71518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872914.1;locus_tag=A3216_05370;product=cold-shock protein;protein_id=OAX71518.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 48363 48551 . - . ID=gene-A3216_05375;Name=A3216_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05375 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 48363 48551 . - 0 ID=cds-OAX71519.1;Parent=gene-A3216_05375;Dbxref=NCBI_GP:OAX71519.1;Name=OAX71519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05375;product=hypothetical protein;protein_id=OAX71519.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 48831 49121 . - . ID=gene-A3216_05380;Name=A3216_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05380 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 48831 49121 . - 0 ID=cds-OAX71520.1;Parent=gene-A3216_05380;Dbxref=NCBI_GP:OAX71520.1;Name=OAX71520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05380;product=hypothetical protein;protein_id=OAX71520.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 50379 50903 . + . ID=gene-A3216_05385;Name=A3216_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05385 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 50379 50903 . + 0 ID=cds-OAX71521.1;Parent=gene-A3216_05385;Dbxref=NCBI_GP:OAX71521.1;Name=OAX71521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908737.1;locus_tag=A3216_05385;product=hypothetical protein;protein_id=OAX71521.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 51018 51311 . - . ID=gene-A3216_05390;Name=A3216_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05390 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 51018 51311 . - 0 ID=cds-OAX71522.1;Parent=gene-A3216_05390;Dbxref=NCBI_GP:OAX71522.1;Name=OAX71522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05390;product=hypothetical protein;protein_id=OAX71522.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 51378 51718 . - . ID=gene-A3216_05395;Name=A3216_05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05395;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 51378 51718 . - 0 ID=cds-A3216_05395;Parent=gene-A3216_05395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020726542.1;locus_tag=A3216_05395;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank pseudogene 51797 52171 . - . ID=gene-A3216_05400;Name=A3216_05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05400;pseudo=true GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 51797 52171 . - 0 ID=cds-A3216_05400;Parent=gene-A3216_05400;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877331.1;locus_tag=A3216_05400;product=cyclic pyranopterin monophosphate synthase accessory protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 52350 52574 . - . ID=gene-A3216_05405;Name=A3216_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05405 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 52350 52574 . - 0 ID=cds-OAX71523.1;Parent=gene-A3216_05405;Dbxref=NCBI_GP:OAX71523.1;Name=OAX71523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908738.1;locus_tag=A3216_05405;product=hypothetical protein;protein_id=OAX71523.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 52672 54933 . + . ID=gene-A3216_05410;Name=A3216_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05410 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 52672 54933 . + 0 ID=cds-OAX71524.1;Parent=gene-A3216_05410;Dbxref=NCBI_GP:OAX71524.1;Name=OAX71524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908739.1;locus_tag=A3216_05410;product=DNA-binding protein;protein_id=OAX71524.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 54970 56619 . + . ID=gene-A3216_05415;Name=A3216_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05415 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 54970 56619 . + 0 ID=cds-OAX71525.1;Parent=gene-A3216_05415;Dbxref=NCBI_GP:OAX71525.1;Name=OAX71525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908740.1;locus_tag=A3216_05415;product=helicase;protein_id=OAX71525.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 56731 57123 . - . ID=gene-A3216_05420;Name=A3216_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05420 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 56731 57123 . - 0 ID=cds-OAX71526.1;Parent=gene-A3216_05420;Dbxref=NCBI_GP:OAX71526.1;Name=OAX71526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908741.1;locus_tag=A3216_05420;product=hypothetical protein;protein_id=OAX71526.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 57502 57762 . - . ID=gene-A3216_05425;Name=A3216_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05425 GCA_001648835.1|LVXE01000011.1 GeneMarkS+ CDS 57502 57762 . - 0 ID=cds-OAX71527.1;Parent=gene-A3216_05425;Dbxref=NCBI_GP:OAX71527.1;Name=OAX71527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05425;product=hypothetical protein;protein_id=OAX71527.1;transl_table=11 GCA_001648835.1|LVXE01000011.1 Genbank gene 58749 59225 . - . ID=gene-A3216_05430;Name=A3216_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05430 GCA_001648835.1|LVXE01000011.1 Protein Homology CDS 58749 59225 . - 0 ID=cds-OAX71528.1;Parent=gene-A3216_05430;Dbxref=NCBI_GP:OAX71528.1;Name=OAX71528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907726.1;locus_tag=A3216_05430;product=hypothetical protein;protein_id=OAX71528.1;transl_table=11 ##sequence-region LVXE01000106.1 1 1655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000106.1 Genbank region 1 1655 . + . ID=LVXE01000106.1:1..1655;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000106.1 Genbank gene 1 705 . + . ID=gene-A3216_14215;Name=A3216_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14215;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000106.1 GeneMarkS+ CDS 1 705 . + 0 ID=cds-OAX70069.1;Parent=gene-A3216_14215;Dbxref=NCBI_GP:OAX70069.1;Name=OAX70069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14215;partial=true;product=hypothetical protein;protein_id=OAX70069.1;start_range=.,1;transl_table=11 ##sequence-region LVXE01000107.1 1 1508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000107.1 Genbank region 1 1508 . + . ID=LVXE01000107.1:1..1508;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 ##sequence-region LVXE01000012.1 1 58599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000012.1 Genbank region 1 58599 . + . ID=LVXE01000012.1:1..58599;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000012.1 Genbank gene 82 294 . - . ID=gene-A3216_05435;Name=A3216_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05435 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 82 294 . - 0 ID=cds-OAX71454.1;Parent=gene-A3216_05435;Dbxref=NCBI_GP:OAX71454.1;Name=OAX71454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05435;product=hypothetical protein;protein_id=OAX71454.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 349 633 . - . ID=gene-A3216_05440;Name=A3216_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05440 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 349 633 . - 0 ID=cds-OAX71455.1;Parent=gene-A3216_05440;Dbxref=NCBI_GP:OAX71455.1;Name=OAX71455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05440;product=hypothetical protein;protein_id=OAX71455.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 1044 1289 . + . ID=gene-A3216_05445;Name=A3216_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05445 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 1044 1289 . + 0 ID=cds-OAX71456.1;Parent=gene-A3216_05445;Dbxref=NCBI_GP:OAX71456.1;Name=OAX71456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05445;product=hypothetical protein;protein_id=OAX71456.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 1748 3016 . + . ID=gene-A3216_05450;Name=A3216_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05450 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 1748 3016 . + 0 ID=cds-OAX71457.1;Parent=gene-A3216_05450;Dbxref=NCBI_GP:OAX71457.1;Name=OAX71457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50144.1;locus_tag=A3216_05450;product=phosphoribosylamine--glycine ligase;protein_id=OAX71457.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 3104 4677 . - . ID=gene-A3216_05455;Name=A3216_05455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05455;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 3104 4677 . - 0 ID=cds-A3216_05455;Parent=gene-A3216_05455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379078.1;locus_tag=A3216_05455;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 4836 5545 . - . ID=gene-A3216_05460;Name=A3216_05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05460;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 4836 5545 . - 0 ID=cds-A3216_05460;Parent=gene-A3216_05460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020730730.1;locus_tag=A3216_05460;product=esterase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 5803 6437 . + . ID=gene-A3216_05465;Name=A3216_05465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05465;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 5803 6437 . + 0 ID=cds-A3216_05465;Parent=gene-A3216_05465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010948907.1;locus_tag=A3216_05465;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 6562 7333 . - . ID=gene-A3216_05470;Name=A3216_05470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05470;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 6562 7333 . - 0 ID=cds-A3216_05470;Parent=gene-A3216_05470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020730731.1;locus_tag=A3216_05470;product=GTP pyrophosphokinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 7412 8830 . + . ID=gene-A3216_05475;Name=A3216_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05475 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 7412 8830 . + 0 ID=cds-OAX71458.1;Parent=gene-A3216_05475;Dbxref=NCBI_GP:OAX71458.1;Name=OAX71458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003879873.1;locus_tag=A3216_05475;product=adenylosuccinate lyase;protein_id=OAX71458.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 9415 9717 . - . ID=gene-A3216_05480;Name=A3216_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05480 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 9415 9717 . - 0 ID=cds-OAX71459.1;Parent=gene-A3216_05480;Dbxref=NCBI_GP:OAX71459.1;Name=OAX71459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05480;product=hypothetical protein;protein_id=OAX71459.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 9743 10363 . - . ID=gene-A3216_05485;Name=A3216_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05485 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 9743 10363 . - 0 ID=cds-OAX71460.1;Parent=gene-A3216_05485;Dbxref=NCBI_GP:OAX71460.1;Name=OAX71460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908777.1;locus_tag=A3216_05485;product=hypothetical protein;protein_id=OAX71460.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 10429 11322 . + . ID=gene-A3216_05490;Name=A3216_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05490 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 10429 11322 . + 0 ID=cds-OAX71461.1;Parent=gene-A3216_05490;Dbxref=NCBI_GP:OAX71461.1;Name=OAX71461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015357298.1;locus_tag=A3216_05490;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=OAX71461.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 11319 13493 . + . ID=gene-A3216_05495;Name=A3216_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05495 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 11319 13493 . + 0 ID=cds-OAX71462.1;Parent=gene-A3216_05495;Dbxref=NCBI_GP:OAX71462.1;Name=OAX71462.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908775.1;locus_tag=A3216_05495;product=oligopeptidase B;protein_id=OAX71462.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 13419 13868 . - . ID=gene-A3216_05500;Name=A3216_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05500;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 13419 13868 . - 0 ID=cds-A3216_05500;Parent=gene-A3216_05500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003923230.1;locus_tag=A3216_05500;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 13964 14572 . + . ID=gene-A3216_05505;Name=A3216_05505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05505;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 13964 14572 . + 0 ID=cds-A3216_05505;Parent=gene-A3216_05505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396436.1;locus_tag=A3216_05505;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 14569 16158 . - . ID=gene-A3216_05510;Name=A3216_05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05510;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 14569 16158 . - 0 ID=cds-A3216_05510;Parent=gene-A3216_05510;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010948910.1;locus_tag=A3216_05510;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 16362 17047 . + . ID=gene-A3216_05515;Name=A3216_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05515;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 16362 17047 . + 0 ID=cds-A3216_05515;Parent=gene-A3216_05515;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018602192.1;locus_tag=A3216_05515;product=DUF2334 domain-containing protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 17119 18644 . + . ID=gene-A3216_05520;Name=A3216_05520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05520;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 17119 18644 . + 0 ID=cds-A3216_05520;Parent=gene-A3216_05520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015456168.1;locus_tag=A3216_05520;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 19438 19677 . + . ID=gene-A3216_05525;Name=A3216_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05525 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 19438 19677 . + 0 ID=cds-OAX71463.1;Parent=gene-A3216_05525;Dbxref=NCBI_GP:OAX71463.1;Name=OAX71463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772609.1;locus_tag=A3216_05525;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=OAX71463.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 19674 20348 . + . ID=gene-A3216_05530;Name=A3216_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05530 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 19674 20348 . + 0 ID=cds-OAX71464.1;Parent=gene-A3216_05530;Dbxref=NCBI_GP:OAX71464.1;Name=OAX71464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011738743.1;locus_tag=A3216_05530;product=phosphoribosylformylglycinamidine synthase I;protein_id=OAX71464.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 21033 21706 . - . ID=gene-A3216_05535;Name=A3216_05535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05535;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 21033 21706 . - 0 ID=cds-A3216_05535;Parent=gene-A3216_05535;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003914630.1;locus_tag=A3216_05535;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 22412 23089 . - . ID=gene-A3216_05540;Name=A3216_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05540 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 22412 23089 . - 0 ID=cds-OAX71465.1;Parent=gene-A3216_05540;Dbxref=NCBI_GP:OAX71465.1;Name=OAX71465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05540;product=hypothetical protein;protein_id=OAX71465.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 24347 24538 . - . ID=gene-A3216_05545;Name=A3216_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05545 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 24347 24538 . - 0 ID=cds-OAX71466.1;Parent=gene-A3216_05545;Dbxref=NCBI_GP:OAX71466.1;Name=OAX71466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05545;product=hypothetical protein;protein_id=OAX71466.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 24953 26284 . + . ID=gene-A3216_05550;Name=A3216_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05550 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 24953 26284 . + 0 ID=cds-OAX71467.1;Parent=gene-A3216_05550;Dbxref=NCBI_GP:OAX71467.1;Name=OAX71467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908772.1;locus_tag=A3216_05550;product=M18 family aminopeptidase;protein_id=OAX71467.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 27136 29400 . + . ID=gene-A3216_05555;Name=A3216_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05555 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 27136 29400 . + 0 ID=cds-OAX71468.1;Parent=gene-A3216_05555;Dbxref=NCBI_GP:OAX71468.1;Name=OAX71468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50023.1;locus_tag=A3216_05555;product=phosphoribosylformylglycinamidine synthase II;protein_id=OAX71468.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 29533 30486 . + . ID=gene-A3216_05560;Name=A3216_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05560 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 29533 30486 . + 0 ID=cds-OAX71469.1;Parent=gene-A3216_05560;Dbxref=NCBI_GP:OAX71469.1;Name=OAX71469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908770.1;locus_tag=A3216_05560;product=phosphodiesterase;protein_id=OAX71469.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 30401 32029 . - . ID=gene-A3216_05565;Name=A3216_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05565 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 30401 32029 . - 0 ID=cds-OAX71470.1;Parent=gene-A3216_05565;Dbxref=NCBI_GP:OAX71470.1;Name=OAX71470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50025.1;locus_tag=A3216_05565;product=sugar phosphotransferase;protein_id=OAX71470.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 32451 33641 . - . ID=gene-A3216_05570;Name=A3216_05570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05570;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 32451 33641 . - 0 ID=cds-A3216_05570;Parent=gene-A3216_05570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006242651.1;locus_tag=A3216_05570;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 33661 34056 . + . ID=gene-A3216_05575;Name=A3216_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05575 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 33661 34056 . + 0 ID=cds-OAX71471.1;Parent=gene-A3216_05575;Dbxref=NCBI_GP:OAX71471.1;Name=OAX71471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908768.1;locus_tag=A3216_05575;product=hypothetical protein;protein_id=OAX71471.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 34191 35738 . + . ID=gene-A3216_05580;Name=A3216_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05580 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 34191 35738 . + 0 ID=cds-OAX71472.1;Parent=gene-A3216_05580;Dbxref=NCBI_GP:OAX71472.1;Name=OAX71472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875798.1;locus_tag=A3216_05580;product=amidophosphoribosyltransferase;protein_id=OAX71472.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 35838 36932 . + . ID=gene-A3216_05585;Name=A3216_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05585 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 35838 36932 . + 0 ID=cds-OAX71473.1;Parent=gene-A3216_05585;Dbxref=NCBI_GP:OAX71473.1;Name=OAX71473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014000437.1;locus_tag=A3216_05585;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=OAX71473.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 37026 37214 . - . ID=gene-A3216_05590;Name=A3216_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05590 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 37026 37214 . - 0 ID=cds-OAX71474.1;Parent=gene-A3216_05590;Dbxref=NCBI_GP:OAX71474.1;Name=OAX71474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011782251.1;locus_tag=A3216_05590;product=hypothetical protein;protein_id=OAX71474.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 37383 38483 . - . ID=gene-A3216_05595;Name=A3216_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05595 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 37383 38483 . - 0 ID=cds-OAX71475.1;Parent=gene-A3216_05595;Dbxref=NCBI_GP:OAX71475.1;Name=OAX71475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634445.1;locus_tag=A3216_05595;product=glycine cleavage system protein T;protein_id=OAX71475.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 40253 40504 . - . ID=gene-A3216_05600;Name=A3216_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05600 GCA_001648835.1|LVXE01000012.1 GeneMarkS+ CDS 40253 40504 . - 0 ID=cds-OAX71476.1;Parent=gene-A3216_05600;Dbxref=NCBI_GP:OAX71476.1;Name=OAX71476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05600;product=hypothetical protein;protein_id=OAX71476.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 40666 40905 . + . ID=gene-A3216_05605;Name=A3216_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05605 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 40666 40905 . + 0 ID=cds-OAX71477.1;Parent=gene-A3216_05605;Dbxref=NCBI_GP:OAX71477.1;Name=OAX71477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908763.1;locus_tag=A3216_05605;product=hypothetical protein;protein_id=OAX71477.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 42210 42896 . - . ID=gene-A3216_05610;Name=A3216_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05610 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 42210 42896 . - 0 ID=cds-OAX71487.1;Parent=gene-A3216_05610;Dbxref=NCBI_GP:OAX71487.1;Name=OAX71487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBC6.1;locus_tag=A3216_05610;product=fatty acid-binding protein;protein_id=OAX71487.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 43155 43457 . - . ID=gene-A3216_05615;Name=A3216_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05615 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 43155 43457 . - 0 ID=cds-OAX71478.1;Parent=gene-A3216_05615;Dbxref=NCBI_GP:OAX71478.1;Name=OAX71478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908761.1;locus_tag=A3216_05615;product=hypothetical protein;protein_id=OAX71478.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 43459 44292 . - . ID=gene-A3216_05620;Name=A3216_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05620 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 43459 44292 . - 0 ID=cds-OAX71479.1;Parent=gene-A3216_05620;Dbxref=NCBI_GP:OAX71479.1;Name=OAX71479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50036.1;locus_tag=A3216_05620;product=thiosulfate sulfurtransferase;protein_id=OAX71479.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 44324 44809 . - . ID=gene-A3216_05625;Name=A3216_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05625 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 44324 44809 . - 0 ID=cds-OAX71480.1;Parent=gene-A3216_05625;Dbxref=NCBI_GP:OAX71480.1;Name=OAX71480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908759.1;locus_tag=A3216_05625;product=hypothetical protein;protein_id=OAX71480.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 45022 45444 . - . ID=gene-A3216_05630;Name=A3216_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05630 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 45022 45444 . - 0 ID=cds-OAX71488.1;Parent=gene-A3216_05630;Dbxref=NCBI_GP:OAX71488.1;Name=OAX71488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908758.1;locus_tag=A3216_05630;product=thiol reductase thioredoxin;protein_id=OAX71488.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 45537 46349 . - . ID=gene-A3216_05635;Name=A3216_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05635 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 45537 46349 . - 0 ID=cds-OAX71481.1;Parent=gene-A3216_05635;Dbxref=NCBI_GP:OAX71481.1;Name=OAX71481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875809.1;locus_tag=A3216_05635;product=hypothetical protein;protein_id=OAX71481.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 46538 47305 . + . ID=gene-A3216_05640;Name=A3216_05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05640;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 46538 47305 . + 0 ID=cds-A3216_05640;Parent=gene-A3216_05640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875810.1;locus_tag=A3216_05640;product=transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 47305 48240 . + . ID=gene-A3216_05645;Name=A3216_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05645 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 47305 48240 . + 0 ID=cds-OAX71489.1;Parent=gene-A3216_05645;Dbxref=NCBI_GP:OAX71489.1;Name=OAX71489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBC9.1;locus_tag=A3216_05645;product=mycothiol synthase;protein_id=OAX71489.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 48233 49522 . + . ID=gene-A3216_05650;Name=A3216_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05650 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 48233 49522 . + 0 ID=cds-OAX71482.1;Parent=gene-A3216_05650;Dbxref=NCBI_GP:OAX71482.1;Name=OAX71482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908755.1;locus_tag=A3216_05650;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=OAX71482.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 49542 50475 . + . ID=gene-A3216_05655;Name=A3216_05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05655;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 49542 50475 . + 0 ID=cds-A3216_05655;Parent=gene-A3216_05655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011730785.1;locus_tag=A3216_05655;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 50475 51233 . + . ID=gene-A3216_05660;Name=A3216_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05660;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 50475 51233 . + 0 ID=cds-A3216_05660;Parent=gene-A3216_05660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019736535.1;locus_tag=A3216_05660;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 51304 52080 . + . ID=gene-A3216_05665;Name=A3216_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05665 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 51304 52080 . + 0 ID=cds-OAX71483.1;Parent=gene-A3216_05665;Dbxref=NCBI_GP:OAX71483.1;Name=OAX71483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005112721.1;locus_tag=A3216_05665;product=phosphate ABC transporter ATP-binding protein;protein_id=OAX71483.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 52107 52775 . - . ID=gene-A3216_05670;Name=A3216_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05670 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 52107 52775 . - 0 ID=cds-OAX71484.1;Parent=gene-A3216_05670;Dbxref=NCBI_GP:OAX71484.1;Name=OAX71484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50047.1;locus_tag=A3216_05670;product=phosphate transport system regulatory protein PhoU;protein_id=OAX71484.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank pseudogene 52874 54211 . - . ID=gene-A3216_05675;Name=A3216_05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05675;pseudo=true GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 52874 54211 . - 0 ID=cds-A3216_05675;Parent=gene-A3216_05675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019683818.1;locus_tag=A3216_05675;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 54923 56113 . - . ID=gene-A3216_05680;Name=A3216_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05680 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 54923 56113 . - 0 ID=cds-OAX71485.1;Parent=gene-A3216_05680;Dbxref=NCBI_GP:OAX71485.1;Name=OAX71485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877212.1;locus_tag=A3216_05680;product=tRNA-dihydrouridine synthase;protein_id=OAX71485.1;transl_table=11 GCA_001648835.1|LVXE01000012.1 Genbank gene 56121 57137 . - . ID=gene-A3216_05685;Name=A3216_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05685 GCA_001648835.1|LVXE01000012.1 Protein Homology CDS 56121 57137 . - 0 ID=cds-OAX71486.1;Parent=gene-A3216_05685;Dbxref=NCBI_GP:OAX71486.1;Name=OAX71486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007777619.1;locus_tag=A3216_05685;product=acyl-ACP desaturase;protein_id=OAX71486.1;transl_table=11 ##sequence-region LVXE01000013.1 1 56820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000013.1 Genbank region 1 56820 . + . ID=LVXE01000013.1:1..56820;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000013.1 Genbank gene 12 1121 . + . ID=gene-A3216_05690;Name=A3216_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05690 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 12 1121 . + 0 ID=cds-OAX71421.1;Parent=gene-A3216_05690;Dbxref=NCBI_GP:OAX71421.1;Name=OAX71421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57240.1;locus_tag=A3216_05690;product=inositol 1-phosphate synthase;protein_id=OAX71421.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 1203 2792 . - . ID=gene-A3216_05695;Name=A3216_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05695 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 1203 2792 . - 0 ID=cds-OAX71449.1;Parent=gene-A3216_05695;Dbxref=NCBI_GP:OAX71449.1;Name=OAX71449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46810.2;locus_tag=A3216_05695;product=glutamine-hydrolyzing GMP synthase;protein_id=OAX71449.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 3408 3920 . + . ID=gene-A3216_05700;Name=A3216_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05700 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 3408 3920 . + 0 ID=cds-OAX71422.1;Parent=gene-A3216_05700;Dbxref=NCBI_GP:OAX71422.1;Name=OAX71422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907706.1;locus_tag=A3216_05700;product=hypothetical protein;protein_id=OAX71422.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 4395 5180 . + . ID=gene-A3216_05705;Name=A3216_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05705 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 4395 5180 . + 0 ID=cds-OAX71423.1;Parent=gene-A3216_05705;Dbxref=NCBI_GP:OAX71423.1;Name=OAX71423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49741.1;locus_tag=A3216_05705;product=hypothetical protein;protein_id=OAX71423.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 5194 7572 . + . ID=gene-A3216_05710;Name=A3216_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05710 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 5194 7572 . + 0 ID=cds-OAX71424.1;Parent=gene-A3216_05710;Dbxref=NCBI_GP:OAX71424.1;Name=OAX71424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49736.1;locus_tag=A3216_05710;product=glycosyl hydrolase;protein_id=OAX71424.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 7556 8061 . - . ID=gene-A3216_05715;Name=A3216_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05715;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 7556 8061 . - 0 ID=cds-A3216_05715;Parent=gene-A3216_05715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011726021.1;locus_tag=A3216_05715;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 8675 10384 . - . ID=gene-A3216_05720;Name=A3216_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05720 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 8675 10384 . - 0 ID=cds-OAX71450.1;Parent=gene-A3216_05720;Dbxref=NCBI_GP:OAX71450.1;Name=OAX71450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907703.1;locus_tag=A3216_05720;product=cholesterol oxidase;protein_id=OAX71450.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 10449 11576 . - . ID=gene-A3216_05725;Name=A3216_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05725 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 10449 11576 . - 0 ID=cds-OAX71425.1;Parent=gene-A3216_05725;Dbxref=NCBI_GP:OAX71425.1;Name=OAX71425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49721.1;locus_tag=A3216_05725;product=inosine 5-monophosphate dehydrogenase;protein_id=OAX71425.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 11585 13174 . - . ID=gene-A3216_05730;Name=A3216_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05730 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 11585 13174 . - 0 ID=cds-OAX71426.1;Parent=gene-A3216_05730;Dbxref=NCBI_GP:OAX71426.1;Name=OAX71426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773415.1;locus_tag=A3216_05730;product=IMP dehydrogenase;protein_id=OAX71426.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 13329 13742 . + . ID=gene-A3216_05735;Name=A3216_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05735 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 13329 13742 . + 0 ID=cds-OAX71427.1;Parent=gene-A3216_05735;Dbxref=NCBI_GP:OAX71427.1;Name=OAX71427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942861.1;locus_tag=A3216_05735;product=hypothetical protein;protein_id=OAX71427.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 14670 14855 . - . ID=gene-A3216_05740;Name=A3216_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05740 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 14670 14855 . - 0 ID=cds-OAX71428.1;Parent=gene-A3216_05740;Dbxref=NCBI_GP:OAX71428.1;Name=OAX71428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05740;product=hypothetical protein;protein_id=OAX71428.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 15225 15404 . + . ID=gene-A3216_05745;Name=A3216_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05745 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 15225 15404 . + 0 ID=cds-OAX71429.1;Parent=gene-A3216_05745;Dbxref=NCBI_GP:OAX71429.1;Name=OAX71429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05745;product=hypothetical protein;protein_id=OAX71429.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 15877 16391 . - . ID=gene-A3216_05750;Name=A3216_05750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05750;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 15877 16391 . - 0 ID=cds-A3216_05750;Parent=gene-A3216_05750;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014584915.1;locus_tag=A3216_05750;product=RNA polymerase subunit sigma;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 16550 17395 . - . ID=gene-A3216_05755;Name=A3216_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05755 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 16550 17395 . - 0 ID=cds-OAX71430.1;Parent=gene-A3216_05755;Dbxref=NCBI_GP:OAX71430.1;Name=OAX71430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907699.1;locus_tag=A3216_05755;product=hypothetical protein;protein_id=OAX71430.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 17756 18064 . + . ID=gene-A3216_05760;Name=A3216_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05760 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 17756 18064 . + 0 ID=cds-OAX71451.1;Parent=gene-A3216_05760;Dbxref=NCBI_GP:OAX71451.1;Name=OAX71451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773426.1;locus_tag=A3216_05760;product=WhiB family transcriptional regulator;protein_id=OAX71451.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 18664 20277 . - . ID=gene-A3216_05765;Name=A3216_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05765 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 18664 20277 . - 0 ID=cds-OAX71431.1;Parent=gene-A3216_05765;Dbxref=NCBI_GP:OAX71431.1;Name=OAX71431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383248.1;locus_tag=A3216_05765;product=chaperonin GroL;protein_id=OAX71431.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 20356 20658 . - . ID=gene-A3216_05770;Name=A3216_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05770 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 20356 20658 . - 0 ID=cds-OAX71432.1;Parent=gene-A3216_05770;Dbxref=NCBI_GP:OAX71432.1;Name=OAX71432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1T576.1;locus_tag=A3216_05770;product=co-chaperone GroES;protein_id=OAX71432.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 20940 21995 . - . ID=gene-A3216_05775;Name=A3216_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05775 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 20940 21995 . - 0 ID=cds-OAX71433.1;Parent=gene-A3216_05775;Dbxref=NCBI_GP:OAX71433.1;Name=OAX71433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P37969.2;locus_tag=A3216_05775;product=tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=OAX71433.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 21992 23071 . - . ID=gene-A3216_05780;Name=A3216_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05780 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 21992 23071 . - 0 ID=cds-OAX71434.1;Parent=gene-A3216_05780;Dbxref=NCBI_GP:OAX71434.1;Name=OAX71434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49857.1;locus_tag=A3216_05780;product=ribosomal-protein-alanine acetyltransferase;protein_id=OAX71434.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 23068 23553 . - . ID=gene-A3216_05785;Name=A3216_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05785 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 23068 23553 . - 0 ID=cds-OAX71435.1;Parent=gene-A3216_05785;Dbxref=NCBI_GP:OAX71435.1;Name=OAX71435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49864.1;locus_tag=A3216_05785;product=tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE;protein_id=OAX71435.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 23546 24547 . - . ID=gene-A3216_05790;Name=A3216_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05790 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 23546 24547 . - 0 ID=cds-OAX71436.1;Parent=gene-A3216_05790;Dbxref=NCBI_GP:OAX71436.1;Name=OAX71436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907692.1;locus_tag=A3216_05790;product=hypothetical protein;protein_id=OAX71436.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 24537 25703 . - . ID=gene-A3216_05795;Name=A3216_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05795 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 24537 25703 . - 0 ID=cds-OAX71437.1;Parent=gene-A3216_05795;Dbxref=NCBI_GP:OAX71437.1;Name=OAX71437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P38056.1;locus_tag=A3216_05795;product=alanine racemase;protein_id=OAX71437.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 25810 27122 . - . ID=gene-A3216_05800;Name=A3216_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05800;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 25810 27122 . - 0 ID=cds-A3216_05800;Parent=gene-A3216_05800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003917790.1;locus_tag=A3216_05800;product=glutamate decarboxylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 27212 28633 . - . ID=gene-A3216_05805;Name=A3216_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05805 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 27212 28633 . - 0 ID=cds-OAX71438.1;Parent=gene-A3216_05805;Dbxref=NCBI_GP:OAX71438.1;Name=OAX71438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011726037.1;locus_tag=A3216_05805;product=bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=OAX71438.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 28979 30856 . - . ID=gene-A3216_05810;Name=A3216_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05810 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 28979 30856 . - 0 ID=cds-OAX71439.1;Parent=gene-A3216_05810;Dbxref=NCBI_GP:OAX71439.1;Name=OAX71439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245199.1;locus_tag=A3216_05810;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=OAX71439.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 31039 31890 . + . ID=gene-A3216_05815;Name=A3216_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05815 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 31039 31890 . + 0 ID=cds-OAX71452.1;Parent=gene-A3216_05815;Dbxref=NCBI_GP:OAX71452.1;Name=OAX71452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009952461.1;locus_tag=A3216_05815;product=hypothetical protein;protein_id=OAX71452.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 32294 32650 . + . ID=gene-A3216_05820;Name=A3216_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05820 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 32294 32650 . + 0 ID=cds-OAX71453.1;Parent=gene-A3216_05820;Dbxref=NCBI_GP:OAX71453.1;Name=OAX71453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907687.1;locus_tag=A3216_05820;product=hypothetical protein;protein_id=OAX71453.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 33182 33376 . - . ID=gene-A3216_05825;Name=A3216_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05825 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 33182 33376 . - 0 ID=cds-OAX71440.1;Parent=gene-A3216_05825;Dbxref=NCBI_GP:OAX71440.1;Name=OAX71440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05825;product=hypothetical protein;protein_id=OAX71440.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 33622 33858 . - . ID=gene-A3216_05830;Name=A3216_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05830 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 33622 33858 . - 0 ID=cds-OAX71441.1;Parent=gene-A3216_05830;Dbxref=NCBI_GP:OAX71441.1;Name=OAX71441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05830;product=hypothetical protein;protein_id=OAX71441.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 34452 35843 . - . ID=gene-A3216_05835;Name=A3216_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05835 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 34452 35843 . - 0 ID=cds-OAX71442.1;Parent=gene-A3216_05835;Dbxref=NCBI_GP:OAX71442.1;Name=OAX71442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49869.1;locus_tag=A3216_05835;product=phosphoglucosamine mutase;protein_id=OAX71442.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 35950 36411 . - . ID=gene-A3216_05840;Name=A3216_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05840 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 35950 36411 . - 0 ID=cds-OAX71443.1;Parent=gene-A3216_05840;Dbxref=NCBI_GP:OAX71443.1;Name=OAX71443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P40828.1;locus_tag=A3216_05840;product=30S ribosomal protein S9;protein_id=OAX71443.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 36408 36851 . - . ID=gene-A3216_05845;Name=A3216_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05845 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 36408 36851 . - 0 ID=cds-OAX71444.1;Parent=gene-A3216_05845;Dbxref=NCBI_GP:OAX71444.1;Name=OAX71444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014814355.1;locus_tag=A3216_05845;product=50S ribosomal protein L13;protein_id=OAX71444.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 37103 37417 . - . ID=gene-A3216_05850;Name=A3216_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05850 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 37103 37417 . - 0 ID=cds-OAX71445.1;Parent=gene-A3216_05850;Dbxref=NCBI_GP:OAX71445.1;Name=OAX71445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907683.1;locus_tag=A3216_05850;product=hypothetical protein;protein_id=OAX71445.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 39011 39760 . - . ID=gene-A3216_05855;Name=A3216_05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05855;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 39011 39760 . - 0 ID=cds-A3216_05855;Parent=gene-A3216_05855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011730881.1;locus_tag=A3216_05855;product=ABC transporter permease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 39985 40878 . - . ID=gene-A3216_05860;Name=A3216_05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05860;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 39985 40878 . - 0 ID=cds-A3216_05860;Parent=gene-A3216_05860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011723686.1;locus_tag=A3216_05860;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 41411 42590 . + . ID=gene-A3216_05865;Name=A3216_05865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05865;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 41411 42590 . + 0 ID=cds-A3216_05865;Parent=gene-A3216_05865;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011857109.1;locus_tag=A3216_05865;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 42571 43628 . + . ID=gene-A3216_05870;Name=A3216_05870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05870;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 42571 43628 . + 0 ID=cds-A3216_05870;Parent=gene-A3216_05870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014210733.1;locus_tag=A3216_05870;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 43718 44047 . - . ID=gene-A3216_05875;Name=A3216_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05875 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 43718 44047 . - 0 ID=cds-OAX71446.1;Parent=gene-A3216_05875;Dbxref=NCBI_GP:OAX71446.1;Name=OAX71446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05875;product=hypothetical protein;protein_id=OAX71446.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 44874 46417 . - . ID=gene-A3216_05880;Name=A3216_05880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05880;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 44874 46417 . - 0 ID=cds-A3216_05880;Parent=gene-A3216_05880;Note=thiamine-pyrophosphate requiring enzyme%3B frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379046.1;locus_tag=A3216_05880;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 46414 47222 . - . ID=gene-A3216_05885;Name=A3216_05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05885;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 46414 47222 . - 0 ID=cds-A3216_05885;Parent=gene-A3216_05885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166449.1;locus_tag=A3216_05885;product=amidohydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 48090 48541 . - . ID=gene-A3216_05890;Name=A3216_05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05890;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 48090 48541 . - 0 ID=cds-A3216_05890;Parent=gene-A3216_05890;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003909939.1;locus_tag=A3216_05890;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 48729 48935 . - . ID=gene-A3216_05895;Name=A3216_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05895 GCA_001648835.1|LVXE01000013.1 GeneMarkS+ CDS 48729 48935 . - 0 ID=cds-OAX71447.1;Parent=gene-A3216_05895;Dbxref=NCBI_GP:OAX71447.1;Name=OAX71447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05895;product=hypothetical protein;protein_id=OAX71447.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank gene 54518 55549 . - . ID=gene-A3216_05900;Name=A3216_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05900 GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 54518 55549 . - 0 ID=cds-OAX71448.1;Parent=gene-A3216_05900;Dbxref=NCBI_GP:OAX71448.1;Name=OAX71448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011723677.1;locus_tag=A3216_05900;product=LLM class F420-dependent oxidoreductase;protein_id=OAX71448.1;transl_table=11 GCA_001648835.1|LVXE01000013.1 Genbank pseudogene 55650 56622 . + . ID=gene-A3216_05905;Name=A3216_05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05905;pseudo=true GCA_001648835.1|LVXE01000013.1 Protein Homology CDS 55650 56622 . + 0 ID=cds-A3216_05905;Parent=gene-A3216_05905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875701.1;locus_tag=A3216_05905;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000014.1 1 53676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000014.1 Genbank region 1 53676 . + . ID=LVXE01000014.1:1..53676;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000014.1 Genbank pseudogene 1 2160 . - . ID=gene-A3216_05910;Name=A3216_05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05910;pseudo=true GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 1 2160 . - 0 ID=cds-A3216_05910;Parent=gene-A3216_05910;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907524.1;locus_tag=A3216_05910;product=polyketide synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 2172 4061 . - . ID=gene-A3216_05915;Name=A3216_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05915 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 2172 4061 . - 0 ID=cds-OAX71384.1;Parent=gene-A3216_05915;Dbxref=NCBI_GP:OAX71384.1;Name=OAX71384.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166823.1;locus_tag=A3216_05915;product=fatty-acid--CoA ligase;protein_id=OAX71384.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 4298 5308 . - . ID=gene-A3216_05920;Name=A3216_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05920 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 4298 5308 . - 0 ID=cds-OAX71385.1;Parent=gene-A3216_05920;Dbxref=NCBI_GP:OAX71385.1;Name=OAX71385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907522.1;locus_tag=A3216_05920;product=cutinase;protein_id=OAX71385.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 5463 6368 . - . ID=gene-A3216_05925;Name=A3216_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05925 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 5463 6368 . - 0 ID=cds-OAX71386.1;Parent=gene-A3216_05925;Dbxref=NCBI_GP:OAX71386.1;Name=OAX71386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876950.1;locus_tag=A3216_05925;product=hypothetical protein;protein_id=OAX71386.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 6529 7521 . - . ID=gene-A3216_05930;Name=A3216_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05930 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 6529 7521 . - 0 ID=cds-OAX71387.1;Parent=gene-A3216_05930;Dbxref=NCBI_GP:OAX71387.1;Name=OAX71387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q05861.3;locus_tag=A3216_05930;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=OAX71387.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 7910 9859 . - . ID=gene-A3216_05935;Name=A3216_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05935 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 7910 9859 . - 0 ID=cds-OAX71416.1;Parent=gene-A3216_05935;Dbxref=NCBI_GP:OAX71416.1;Name=OAX71416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907519.1;locus_tag=A3216_05935;product=hypothetical protein;protein_id=OAX71416.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 9900 10808 . - . ID=gene-A3216_05940;Name=A3216_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05940 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 9900 10808 . - 0 ID=cds-OAX71388.1;Parent=gene-A3216_05940;Dbxref=NCBI_GP:OAX71388.1;Name=OAX71388.1;Note=catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166828.1;locus_tag=A3216_05940;product=phosphoribose diphosphate--decaprenyl-phosphate phosphoribosyltransferase;protein_id=OAX71388.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 10805 11383 . - . ID=gene-A3216_05945;Name=A3216_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05945 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 10805 11383 . - 0 ID=cds-OAX71389.1;Parent=gene-A3216_05945;Dbxref=NCBI_GP:OAX71389.1;Name=OAX71389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907517.1;locus_tag=A3216_05945;product=hypothetical protein;protein_id=OAX71389.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 11376 13307 . - . ID=gene-A3216_05950;Name=A3216_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05950 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 11376 13307 . - 0 ID=cds-OAX71390.1;Parent=gene-A3216_05950;Dbxref=NCBI_GP:OAX71390.1;Name=OAX71390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907516.1;locus_tag=A3216_05950;product=glycosyl transferase;protein_id=OAX71390.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 13307 14548 . - . ID=gene-A3216_05955;Name=A3216_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05955 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 13307 14548 . - 0 ID=cds-OAX71391.1;Parent=gene-A3216_05955;Dbxref=NCBI_GP:OAX71391.1;Name=OAX71391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907515.1;locus_tag=A3216_05955;product=UDP-galactopyranose mutase;protein_id=OAX71391.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 14815 15525 . + . ID=gene-A3216_05960;Name=A3216_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05960 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 14815 15525 . + 0 ID=cds-OAX71392.1;Parent=gene-A3216_05960;Dbxref=NCBI_GP:OAX71392.1;Name=OAX71392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P19361.1;locus_tag=A3216_05960;product=hypothetical protein;protein_id=OAX71392.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 17504 18349 . - . ID=gene-A3216_05965;Name=A3216_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05965 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 17504 18349 . - 0 ID=cds-OAX71393.1;Parent=gene-A3216_05965;Dbxref=NCBI_GP:OAX71393.1;Name=OAX71393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907513.1;locus_tag=A3216_05965;product=HAD family hydrolase;protein_id=OAX71393.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 18384 18770 . - . ID=gene-A3216_05970;Name=A3216_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05970 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 18384 18770 . - 0 ID=cds-OAX71394.1;Parent=gene-A3216_05970;Dbxref=NCBI_GP:OAX71394.1;Name=OAX71394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05970;product=hypothetical protein;protein_id=OAX71394.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 18856 19629 . - . ID=gene-A3216_05975;Name=A3216_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05975 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 18856 19629 . - 0 ID=cds-OAX71395.1;Parent=gene-A3216_05975;Dbxref=NCBI_GP:OAX71395.1;Name=OAX71395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907512.1;locus_tag=A3216_05975;product=acyltransferase;protein_id=OAX71395.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank pseudogene 19687 20426 . + . ID=gene-A3216_05980;Name=A3216_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_05980;pseudo=true GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 19687 20426 . + 0 ID=cds-A3216_05980;Parent=gene-A3216_05980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015291755.1;locus_tag=A3216_05980;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 20761 20970 . + . ID=gene-A3216_05985;Name=A3216_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05985 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 20761 20970 . + 0 ID=cds-OAX71396.1;Parent=gene-A3216_05985;Dbxref=NCBI_GP:OAX71396.1;Name=OAX71396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05985;product=hypothetical protein;protein_id=OAX71396.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 21083 21286 . + . ID=gene-A3216_05990;Name=A3216_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05990 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 21083 21286 . + 0 ID=cds-OAX71397.1;Parent=gene-A3216_05990;Dbxref=NCBI_GP:OAX71397.1;Name=OAX71397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05990;product=hypothetical protein;protein_id=OAX71397.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 21376 21639 . + . ID=gene-A3216_05995;Name=A3216_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_05995 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 21376 21639 . + 0 ID=cds-OAX71398.1;Parent=gene-A3216_05995;Dbxref=NCBI_GP:OAX71398.1;Name=OAX71398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_05995;product=hypothetical protein;protein_id=OAX71398.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 25303 26556 . - . ID=gene-A3216_06000;Name=A3216_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06000 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 25303 26556 . - 0 ID=cds-OAX71399.1;Parent=gene-A3216_06000;Dbxref=NCBI_GP:OAX71399.1;Name=OAX71399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDC1.1;locus_tag=A3216_06000;product=serine--tRNA ligase;protein_id=OAX71399.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 26678 28030 . + . ID=gene-A3216_06005;Name=A3216_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06005 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 26678 28030 . + 0 ID=cds-OAX71417.1;Parent=gene-A3216_06005;Dbxref=NCBI_GP:OAX71417.1;Name=OAX71417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907510.1;locus_tag=A3216_06005;product=hypothetical protein;protein_id=OAX71417.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank pseudogene 28027 28310 . + . ID=gene-A3216_06010;Name=A3216_06010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06010;pseudo=true GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 28027 28310 . + 0 ID=cds-A3216_06010;Parent=gene-A3216_06010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011562406.1;locus_tag=A3216_06010;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 28593 29288 . - . ID=gene-A3216_06015;Name=A3216_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06015 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 28593 29288 . - 0 ID=cds-OAX71400.1;Parent=gene-A3216_06015;Dbxref=NCBI_GP:OAX71400.1;Name=OAX71400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013831068.1;locus_tag=A3216_06015;product=phosphoglycerate mutase;protein_id=OAX71400.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 29285 30247 . - . ID=gene-A3216_06020;Name=A3216_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06020 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 29285 30247 . - 0 ID=cds-OAX71418.1;Parent=gene-A3216_06020;Dbxref=NCBI_GP:OAX71418.1;Name=OAX71418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383632.1;locus_tag=A3216_06020;product=prephenate dehydratase;protein_id=OAX71418.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 30547 30849 . + . ID=gene-A3216_06025;Name=A3216_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06025 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 30547 30849 . + 0 ID=cds-OAX71401.1;Parent=gene-A3216_06025;Dbxref=NCBI_GP:OAX71401.1;Name=OAX71401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06025;product=hypothetical protein;protein_id=OAX71401.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 30911 31096 . - . ID=gene-A3216_06030;Name=A3216_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06030 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 30911 31096 . - 0 ID=cds-OAX71402.1;Parent=gene-A3216_06030;Dbxref=NCBI_GP:OAX71402.1;Name=OAX71402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06030;product=hypothetical protein;protein_id=OAX71402.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank pseudogene 31153 31973 . + . ID=gene-A3216_06035;Name=A3216_06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06035;pseudo=true GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 31153 31973 . + 0 ID=cds-A3216_06035;Parent=gene-A3216_06035;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003931311.1;locus_tag=A3216_06035;product=LytTR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 32731 33546 . - . ID=gene-A3216_06040;Name=A3216_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06040 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 32731 33546 . - 0 ID=cds-OAX71419.1;Parent=gene-A3216_06040;Dbxref=NCBI_GP:OAX71419.1;Name=OAX71419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907507.1;locus_tag=A3216_06040;product=glycerophosphodiester phosphodiesterase;protein_id=OAX71419.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 33552 34586 . - . ID=gene-A3216_06045;Name=A3216_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06045 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 33552 34586 . - 0 ID=cds-OAX71403.1;Parent=gene-A3216_06045;Dbxref=NCBI_GP:OAX71403.1;Name=OAX71403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907506.1;locus_tag=A3216_06045;product=hypothetical protein;protein_id=OAX71403.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 35408 36031 . + . ID=gene-A3216_06050;Name=A3216_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06050 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 35408 36031 . + 0 ID=cds-OAX71404.1;Parent=gene-A3216_06050;Dbxref=NCBI_GP:OAX71404.1;Name=OAX71404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P13367.3;locus_tag=A3216_06050;product=superoxide dismutase;protein_id=OAX71404.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 36232 36765 . + . ID=gene-A3216_06055;Name=A3216_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06055 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 36232 36765 . + 0 ID=cds-OAX71405.1;Parent=gene-A3216_06055;Dbxref=NCBI_GP:OAX71405.1;Name=OAX71405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907504.1;locus_tag=A3216_06055;product=peptidase;protein_id=OAX71405.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 37119 37382 . + . ID=gene-A3216_06060;Name=A3216_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06060 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 37119 37382 . + 0 ID=cds-OAX71406.1;Parent=gene-A3216_06060;Dbxref=NCBI_GP:OAX71406.1;Name=OAX71406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907503.1;locus_tag=A3216_06060;product=hypothetical protein;protein_id=OAX71406.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 37759 38157 . + . ID=gene-A3216_06065;Name=A3216_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06065 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 37759 38157 . + 0 ID=cds-OAX71407.1;Parent=gene-A3216_06065;Dbxref=NCBI_GP:OAX71407.1;Name=OAX71407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907502.1;locus_tag=A3216_06065;product=secretion protein EspR;protein_id=OAX71407.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 38342 39058 . + . ID=gene-A3216_06070;Name=A3216_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06070 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 38342 39058 . + 0 ID=cds-OAX71408.1;Parent=gene-A3216_06070;Dbxref=NCBI_GP:OAX71408.1;Name=OAX71408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907501.1;locus_tag=A3216_06070;product=hypothetical protein;protein_id=OAX71408.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 39572 39937 . + . ID=gene-A3216_06075;Name=A3216_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06075 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 39572 39937 . + 0 ID=cds-OAX71409.1;Parent=gene-A3216_06075;Dbxref=NCBI_GP:OAX71409.1;Name=OAX71409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907500.1;locus_tag=A3216_06075;product=nucleoid-structuring protein H-NS;protein_id=OAX71409.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 39959 40432 . + . ID=gene-A3216_06080;Name=A3216_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06080 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 39959 40432 . + 0 ID=cds-OAX71410.1;Parent=gene-A3216_06080;Dbxref=NCBI_GP:OAX71410.1;Name=OAX71410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDD2.1;locus_tag=A3216_06080;product=ribonuclease;protein_id=OAX71410.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 40513 41997 . - . ID=gene-A3216_06085;Name=A3216_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06085 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 40513 41997 . - 0 ID=cds-OAX71411.1;Parent=gene-A3216_06085;Dbxref=NCBI_GP:OAX71411.1;Name=OAX71411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907498.1;locus_tag=A3216_06085;product=FAD-containing monooxygenase EthA;protein_id=OAX71411.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 42063 42710 . + . ID=gene-A3216_06090;Name=A3216_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06090 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 42063 42710 . + 0 ID=cds-OAX71420.1;Parent=gene-A3216_06090;Dbxref=NCBI_GP:OAX71420.1;Name=OAX71420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396904.1;locus_tag=A3216_06090;product=TetR family transcriptional regulator;protein_id=OAX71420.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 43254 43478 . - . ID=gene-A3216_06095;Name=A3216_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06095 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 43254 43478 . - 0 ID=cds-OAX71412.1;Parent=gene-A3216_06095;Dbxref=NCBI_GP:OAX71412.1;Name=OAX71412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06095;product=hypothetical protein;protein_id=OAX71412.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 44927 46393 . - . ID=gene-A3216_06100;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=A3216_06100 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 44927 46393 . - 0 ID=cds-OAX71413.1;Parent=gene-A3216_06100;Dbxref=NCBI_GP:OAX71413.1;Name=OAX71413.1;Note=glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate;gbkey=CDS;gene=gltD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166879.1;locus_tag=A3216_06100;product=glutamate synthase;protein_id=OAX71413.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 46386 50969 . - . ID=gene-A3216_06105;Name=A3216_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06105 GCA_001648835.1|LVXE01000014.1 Protein Homology CDS 46386 50969 . - 0 ID=cds-OAX71414.1;Parent=gene-A3216_06105;Dbxref=NCBI_GP:OAX71414.1;Name=OAX71414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771849.1;locus_tag=A3216_06105;product=glutamate synthase subunit alpha;protein_id=OAX71414.1;transl_table=11 GCA_001648835.1|LVXE01000014.1 Genbank gene 52452 52757 . - . ID=gene-A3216_06110;Name=A3216_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06110 GCA_001648835.1|LVXE01000014.1 GeneMarkS+ CDS 52452 52757 . - 0 ID=cds-OAX71415.1;Parent=gene-A3216_06110;Dbxref=NCBI_GP:OAX71415.1;Name=OAX71415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06110;product=hypothetical protein;protein_id=OAX71415.1;transl_table=11 ##sequence-region LVXE01000015.1 1 51955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000015.1 Genbank region 1 51955 . + . ID=LVXE01000015.1:1..51955;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000015.1 Genbank gene 2037 2477 . - . ID=gene-A3216_06115;Name=A3216_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06115 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 2037 2477 . - 0 ID=cds-OAX71346.1;Parent=gene-A3216_06115;Dbxref=NCBI_GP:OAX71346.1;Name=OAX71346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874167.1;locus_tag=A3216_06115;product=cyclase;protein_id=OAX71346.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 2691 3062 . - . ID=gene-A3216_06120;Name=A3216_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06120 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 2691 3062 . - 0 ID=cds-OAX71347.1;Parent=gene-A3216_06120;Dbxref=NCBI_GP:OAX71347.1;Name=OAX71347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O06091.1;locus_tag=A3216_06120;product=hypothetical protein;protein_id=OAX71347.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 4544 4735 . - . ID=gene-A3216_06125;Name=A3216_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06125 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 4544 4735 . - 0 ID=cds-OAX71348.1;Parent=gene-A3216_06125;Dbxref=NCBI_GP:OAX71348.1;Name=OAX71348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06125;product=hypothetical protein;protein_id=OAX71348.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 5160 6509 . - . ID=gene-A3216_06130;Name=A3216_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06130 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 5160 6509 . - 0 ID=cds-OAX71349.1;Parent=gene-A3216_06130;Dbxref=NCBI_GP:OAX71349.1;Name=OAX71349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007769270.1;locus_tag=A3216_06130;product=oxidoreductase;protein_id=OAX71349.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 8929 10347 . - . ID=gene-A3216_06135;Name=A3216_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06135 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 8929 10347 . - 0 ID=cds-OAX71350.1;Parent=gene-A3216_06135;Dbxref=NCBI_GP:OAX71350.1;Name=OAX71350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874195.1;locus_tag=A3216_06135;product=NAD(P) transhydrogenase subunit beta;protein_id=OAX71350.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 10344 10682 . - . ID=gene-A3216_06140;Name=A3216_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06140 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 10344 10682 . - 0 ID=cds-OAX71351.1;Parent=gene-A3216_06140;Dbxref=NCBI_GP:OAX71351.1;Name=OAX71351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909006.1;locus_tag=A3216_06140;product=NAD(P) transhydrogenase subunit alpha;protein_id=OAX71351.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 10675 11778 . - . ID=gene-A3216_06145;Name=A3216_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06145 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 10675 11778 . - 0 ID=cds-OAX71352.1;Parent=gene-A3216_06145;Dbxref=NCBI_GP:OAX71352.1;Name=OAX71352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909007.1;locus_tag=A3216_06145;product=NAD(P) transhydrogenase subunit alpha;protein_id=OAX71352.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 11789 12067 . - . ID=gene-A3216_06150;Name=A3216_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06150 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 11789 12067 . - 0 ID=cds-OAX71353.1;Parent=gene-A3216_06150;Dbxref=NCBI_GP:OAX71353.1;Name=OAX71353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06150;product=hypothetical protein;protein_id=OAX71353.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 14021 14203 . - . ID=gene-A3216_06155;Name=A3216_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06155 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 14021 14203 . - 0 ID=cds-OAX71354.1;Parent=gene-A3216_06155;Dbxref=NCBI_GP:OAX71354.1;Name=OAX71354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06155;product=hypothetical protein;protein_id=OAX71354.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 14220 14444 . + . ID=gene-A3216_06160;Name=A3216_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06160 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 14220 14444 . + 0 ID=cds-OAX71355.1;Parent=gene-A3216_06160;Dbxref=NCBI_GP:OAX71355.1;Name=OAX71355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06160;product=hypothetical protein;protein_id=OAX71355.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 14827 16332 . - . ID=gene-A3216_06165;Name=A3216_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06165 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 14827 16332 . - 0 ID=cds-OAX71356.1;Parent=gene-A3216_06165;Dbxref=NCBI_GP:OAX71356.1;Name=OAX71356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909008.1;locus_tag=A3216_06165;product=aldehyde dehydrogenase;protein_id=OAX71356.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 16520 17461 . - . ID=gene-A3216_06170;Name=A3216_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06170 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 16520 17461 . - 0 ID=cds-OAX71357.1;Parent=gene-A3216_06170;Dbxref=NCBI_GP:OAX71357.1;Name=OAX71357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167214.1;locus_tag=A3216_06170;product=SAM-dependent methyltransferase;protein_id=OAX71357.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 17723 17914 . - . ID=gene-A3216_06175;Name=A3216_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06175 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 17723 17914 . - 0 ID=cds-OAX71358.1;Parent=gene-A3216_06175;Dbxref=NCBI_GP:OAX71358.1;Name=OAX71358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06175;product=hypothetical protein;protein_id=OAX71358.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 17901 18260 . - . ID=gene-A3216_06180;Name=A3216_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06180 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 17901 18260 . - 0 ID=cds-OAX71359.1;Parent=gene-A3216_06180;Dbxref=NCBI_GP:OAX71359.1;Name=OAX71359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06180;product=hypothetical protein;protein_id=OAX71359.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank pseudogene 18488 19050 . - . ID=gene-A3216_06185;Name=A3216_06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06185;pseudo=true GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 18488 19050 . - 0 ID=cds-A3216_06185;Parent=gene-A3216_06185;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956645.1;locus_tag=A3216_06185;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank pseudogene 19155 20009 . - . ID=gene-A3216_06190;Name=A3216_06190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06190;pseudo=true GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 19155 20009 . - 0 ID=cds-A3216_06190;Parent=gene-A3216_06190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011557512.1;locus_tag=A3216_06190;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 20329 20682 . + . ID=gene-A3216_06195;Name=A3216_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06195 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 20329 20682 . + 0 ID=cds-OAX71360.1;Parent=gene-A3216_06195;Dbxref=NCBI_GP:OAX71360.1;Name=OAX71360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06195;product=hypothetical protein;protein_id=OAX71360.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 21342 21674 . - . ID=gene-A3216_06200;Name=A3216_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06200 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 21342 21674 . - 0 ID=cds-OAX71361.1;Parent=gene-A3216_06200;Dbxref=NCBI_GP:OAX71361.1;Name=OAX71361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06200;product=hypothetical protein;protein_id=OAX71361.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 22047 22253 . - . ID=gene-A3216_06205;Name=A3216_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06205 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 22047 22253 . - 0 ID=cds-OAX71362.1;Parent=gene-A3216_06205;Dbxref=NCBI_GP:OAX71362.1;Name=OAX71362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06205;product=hypothetical protein;protein_id=OAX71362.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 22507 22905 . - . ID=gene-A3216_06210;Name=A3216_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06210 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 22507 22905 . - 0 ID=cds-OAX71363.1;Parent=gene-A3216_06210;Dbxref=NCBI_GP:OAX71363.1;Name=OAX71363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06210;product=hypothetical protein;protein_id=OAX71363.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 24330 24863 . + . ID=gene-A3216_06215;Name=A3216_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06215 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 24330 24863 . + 0 ID=cds-OAX71364.1;Parent=gene-A3216_06215;Dbxref=NCBI_GP:OAX71364.1;Name=OAX71364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCZ3.1;locus_tag=A3216_06215;product=peptide-methionine (S)-S-oxide reductase;protein_id=OAX71364.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 25016 25318 . - . ID=gene-A3216_06220;Name=A3216_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06220 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 25016 25318 . - 0 ID=cds-OAX71365.1;Parent=gene-A3216_06220;Dbxref=NCBI_GP:OAX71365.1;Name=OAX71365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06220;product=hypothetical protein;protein_id=OAX71365.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 25380 25796 . - . ID=gene-A3216_06225;Name=A3216_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06225 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 25380 25796 . - 0 ID=cds-OAX71366.1;Parent=gene-A3216_06225;Dbxref=NCBI_GP:OAX71366.1;Name=OAX71366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06225;product=hypothetical protein;protein_id=OAX71366.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 26789 27634 . - . ID=gene-A3216_06230;Name=A3216_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06230 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 26789 27634 . - 0 ID=cds-OAX71367.1;Parent=gene-A3216_06230;Dbxref=NCBI_GP:OAX71367.1;Name=OAX71367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009979912.1;locus_tag=A3216_06230;product=polysaccharide deacetylase;protein_id=OAX71367.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 28103 28282 . - . ID=gene-A3216_06235;Name=A3216_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06235 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 28103 28282 . - 0 ID=cds-OAX71368.1;Parent=gene-A3216_06235;Dbxref=NCBI_GP:OAX71368.1;Name=OAX71368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06235;product=hypothetical protein;protein_id=OAX71368.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 28370 28564 . - . ID=gene-A3216_06240;Name=A3216_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06240 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 28370 28564 . - 0 ID=cds-OAX71369.1;Parent=gene-A3216_06240;Dbxref=NCBI_GP:OAX71369.1;Name=OAX71369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06240;product=hypothetical protein;protein_id=OAX71369.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank pseudogene 28761 30073 . - . ID=gene-A3216_06245;Name=A3216_06245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06245;pseudo=true GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 28761 30073 . - 0 ID=cds-A3216_06245;Parent=gene-A3216_06245;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953167.1;locus_tag=A3216_06245;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 30754 31071 . + . ID=gene-A3216_06250;Name=A3216_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06250 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 30754 31071 . + 0 ID=cds-OAX71383.1;Parent=gene-A3216_06250;Dbxref=NCBI_GP:OAX71383.1;Name=OAX71383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909012.1;locus_tag=A3216_06250;product=hypothetical protein;protein_id=OAX71383.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank pseudogene 31450 31879 . + . ID=gene-A3216_06255;Name=A3216_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06255;pseudo=true GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 31450 31879 . + 0 ID=cds-A3216_06255;Parent=gene-A3216_06255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009979905.1;locus_tag=A3216_06255;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 33519 33815 . + . ID=gene-A3216_06260;Name=A3216_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06260 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 33519 33815 . + 0 ID=cds-OAX71370.1;Parent=gene-A3216_06260;Dbxref=NCBI_GP:OAX71370.1;Name=OAX71370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06260;product=hypothetical protein;protein_id=OAX71370.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 34192 34689 . + . ID=gene-A3216_06265;Name=A3216_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06265 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 34192 34689 . + 0 ID=cds-OAX71371.1;Parent=gene-A3216_06265;Dbxref=NCBI_GP:OAX71371.1;Name=OAX71371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007769393.1;locus_tag=A3216_06265;product=YfcE family phosphodiesterase;protein_id=OAX71371.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 35278 36279 . + . ID=gene-A3216_06270;Name=A3216_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06270 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 35278 36279 . + 0 ID=cds-OAX71372.1;Parent=gene-A3216_06270;Dbxref=NCBI_GP:OAX71372.1;Name=OAX71372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q05862.1;locus_tag=A3216_06270;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=OAX71372.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 36966 37289 . - . ID=gene-A3216_06275;Name=A3216_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06275 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 36966 37289 . - 0 ID=cds-OAX71373.1;Parent=gene-A3216_06275;Dbxref=NCBI_GP:OAX71373.1;Name=OAX71373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06275;product=hypothetical protein;protein_id=OAX71373.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank pseudogene 37682 39419 . - . ID=gene-A3216_06280;Name=A3216_06280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06280;pseudo=true GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 37682 39419 . - 0 ID=cds-A3216_06280;Parent=gene-A3216_06280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O07176.1;locus_tag=A3216_06280;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 39539 40603 . - . ID=gene-A3216_06285;Name=A3216_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06285 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 39539 40603 . - 0 ID=cds-OAX71374.1;Parent=gene-A3216_06285;Dbxref=NCBI_GP:OAX71374.1;Name=OAX71374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909015.1;locus_tag=A3216_06285;product=serine protease;protein_id=OAX71374.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 41501 41989 . + . ID=gene-A3216_06290;Name=A3216_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06290 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 41501 41989 . + 0 ID=cds-OAX71375.1;Parent=gene-A3216_06290;Dbxref=NCBI_GP:OAX71375.1;Name=OAX71375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06290;product=hypothetical protein;protein_id=OAX71375.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 42480 42758 . + . ID=gene-A3216_06295;Name=A3216_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06295 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 42480 42758 . + 0 ID=cds-OAX71376.1;Parent=gene-A3216_06295;Dbxref=NCBI_GP:OAX71376.1;Name=OAX71376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06295;product=hypothetical protein;protein_id=OAX71376.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 43325 44971 . - . ID=gene-A3216_06300;Name=A3216_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06300 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 43325 44971 . - 0 ID=cds-OAX71377.1;Parent=gene-A3216_06300;Dbxref=NCBI_GP:OAX71377.1;Name=OAX71377.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909016.1;locus_tag=A3216_06300;product=acyl-CoA synthetase;protein_id=OAX71377.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 45238 45564 . - . ID=gene-A3216_06305;Name=A3216_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06305 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 45238 45564 . - 0 ID=cds-OAX71378.1;Parent=gene-A3216_06305;Dbxref=NCBI_GP:OAX71378.1;Name=OAX71378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06305;product=hypothetical protein;protein_id=OAX71378.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 46840 47772 . - . ID=gene-A3216_06310;Name=A3216_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06310 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 46840 47772 . - 0 ID=cds-OAX71379.1;Parent=gene-A3216_06310;Dbxref=NCBI_GP:OAX71379.1;Name=OAX71379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909017.1;locus_tag=A3216_06310;product=LysR family transcriptional regulator;protein_id=OAX71379.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 48240 48995 . + . ID=gene-A3216_06315;Name=A3216_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06315 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 48240 48995 . + 0 ID=cds-OAX71380.1;Parent=gene-A3216_06315;Dbxref=NCBI_GP:OAX71380.1;Name=OAX71380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008262156.1;locus_tag=A3216_06315;product=hypothetical protein;protein_id=OAX71380.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 49145 49327 . + . ID=gene-A3216_06320;Name=A3216_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06320 GCA_001648835.1|LVXE01000015.1 GeneMarkS+ CDS 49145 49327 . + 0 ID=cds-OAX71381.1;Parent=gene-A3216_06320;Dbxref=NCBI_GP:OAX71381.1;Name=OAX71381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06320;product=hypothetical protein;protein_id=OAX71381.1;transl_table=11 GCA_001648835.1|LVXE01000015.1 Genbank gene 51171 51425 . - . ID=gene-A3216_06325;Name=A3216_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06325 GCA_001648835.1|LVXE01000015.1 Protein Homology CDS 51171 51425 . - 0 ID=cds-OAX71382.1;Parent=gene-A3216_06325;Dbxref=NCBI_GP:OAX71382.1;Name=OAX71382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909019.1;locus_tag=A3216_06325;product=hypothetical protein;protein_id=OAX71382.1;transl_table=11 ##sequence-region LVXE01000016.1 1 51943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000016.1 Genbank region 1 51943 . + . ID=LVXE01000016.1:1..51943;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000016.1 Genbank gene 353 589 . + . ID=gene-A3216_06330;Name=A3216_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06330 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 353 589 . + 0 ID=cds-OAX71316.1;Parent=gene-A3216_06330;Dbxref=NCBI_GP:OAX71316.1;Name=OAX71316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06330;product=hypothetical protein;protein_id=OAX71316.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 1151 1714 . - . ID=gene-A3216_06335;Name=A3216_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06335 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 1151 1714 . - 0 ID=cds-OAX71317.1;Parent=gene-A3216_06335;Dbxref=NCBI_GP:OAX71317.1;Name=OAX71317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908302.1;locus_tag=A3216_06335;product=hypothetical protein;protein_id=OAX71317.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 2325 3566 . - . ID=gene-A3216_06340;Name=A3216_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06340;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 2325 3566 . - 0 ID=cds-A3216_06340;Parent=gene-A3216_06340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019764512.1;locus_tag=A3216_06340;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 3570 4744 . - . ID=gene-A3216_06345;Name=A3216_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06345;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 3570 4744 . - 0 ID=cds-A3216_06345;Parent=gene-A3216_06345;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787515.1;locus_tag=A3216_06345;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 5054 5482 . - . ID=gene-A3216_06350;Name=A3216_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06350 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 5054 5482 . - 0 ID=cds-OAX71318.1;Parent=gene-A3216_06350;Dbxref=NCBI_GP:OAX71318.1;Name=OAX71318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06350;product=hypothetical protein;protein_id=OAX71318.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 6387 6713 . + . ID=gene-A3216_06355;Name=A3216_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06355 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 6387 6713 . + 0 ID=cds-OAX71319.1;Parent=gene-A3216_06355;Dbxref=NCBI_GP:OAX71319.1;Name=OAX71319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06355;product=hypothetical protein;protein_id=OAX71319.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 7985 8263 . - . ID=gene-A3216_06360;Name=A3216_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06360 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 7985 8263 . - 0 ID=cds-OAX71320.1;Parent=gene-A3216_06360;Dbxref=NCBI_GP:OAX71320.1;Name=OAX71320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06360;product=hypothetical protein;protein_id=OAX71320.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 8342 8418 . - . ID=gene-A3216_06365;Name=A3216_06365;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_06365 GCA_001648835.1|LVXE01000016.1 tRNAscan-SE tRNA 8342 8418 . - . ID=rna-A3216_06365;Parent=gene-A3216_06365;anticodon=(pos:complement(8382..8384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06365;product=tRNA-Pro GCA_001648835.1|LVXE01000016.1 tRNAscan-SE exon 8342 8418 . - . ID=exon-A3216_06365-1;Parent=rna-A3216_06365;anticodon=(pos:complement(8382..8384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06365;product=tRNA-Pro GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 9837 10613 . - . ID=gene-A3216_06370;Name=A3216_06370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06370;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 9837 10613 . - 0 ID=cds-A3216_06370;Parent=gene-A3216_06370;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014588399.1;locus_tag=A3216_06370;product=transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 13526 14911 . - . ID=gene-A3216_06375;Name=A3216_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06375 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 13526 14911 . - 0 ID=cds-OAX71340.1;Parent=gene-A3216_06375;Dbxref=NCBI_GP:OAX71340.1;Name=OAX71340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380294.1;locus_tag=A3216_06375;product=ribosome biogenesis GTPase Der;protein_id=OAX71340.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 14908 15579 . - . ID=gene-A3216_06380;Name=A3216_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06380 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 14908 15579 . - 0 ID=cds-OAX71321.1;Parent=gene-A3216_06380;Dbxref=NCBI_GP:OAX71321.1;Name=OAX71321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49885.1;locus_tag=A3216_06380;product=cytidylate kinase;protein_id=OAX71321.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 15576 16346 . - . ID=gene-A3216_06385;Name=A3216_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06385 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 15576 16346 . - 0 ID=cds-OAX71322.1;Parent=gene-A3216_06385;Dbxref=NCBI_GP:OAX71322.1;Name=OAX71322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355366.1;locus_tag=A3216_06385;product=pseudouridine synthase;protein_id=OAX71322.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 16346 17041 . - . ID=gene-A3216_06390;Name=A3216_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06390 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 16346 17041 . - 0 ID=cds-OAX71341.1;Parent=gene-A3216_06390;Dbxref=NCBI_GP:OAX71341.1;Name=OAX71341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908298.1;locus_tag=A3216_06390;product=SMC-Scp complex subunit ScpB;protein_id=OAX71341.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 17089 17895 . - . ID=gene-A3216_06395;Name=A3216_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06395 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 17089 17895 . - 0 ID=cds-OAX71323.1;Parent=gene-A3216_06395;Dbxref=NCBI_GP:OAX71323.1;Name=OAX71323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908297.1;locus_tag=A3216_06395;product=segregation and condensation protein A;protein_id=OAX71323.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 17892 18755 . - . ID=gene-A3216_06400;Name=A3216_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06400 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 17892 18755 . - 0 ID=cds-OAX71324.1;Parent=gene-A3216_06400;Dbxref=NCBI_GP:OAX71324.1;Name=OAX71324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876324.1;locus_tag=A3216_06400;product=chromosome partitioning protein ParA;protein_id=OAX71324.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 19296 20246 . - . ID=gene-A3216_06405;Name=A3216_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06405 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 19296 20246 . - 0 ID=cds-OAX71325.1;Parent=gene-A3216_06405;Dbxref=NCBI_GP:OAX71325.1;Name=OAX71325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007775943.1;locus_tag=A3216_06405;product=site-specific tyrosine recombinase XerD;protein_id=OAX71325.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 20243 20867 . - . ID=gene-A3216_06410;Name=A3216_06410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06410;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 20243 20867 . - 0 ID=cds-A3216_06410;Parent=gene-A3216_06410;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711857.1;locus_tag=A3216_06410;product=ADP-ribose pyrophosphatase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 20860 22632 . - . ID=gene-A3216_06415;Name=A3216_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06415 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 20860 22632 . - 0 ID=cds-OAX71342.1;Parent=gene-A3216_06415;Dbxref=NCBI_GP:OAX71342.1;Name=OAX71342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169806.1;locus_tag=A3216_06415;product=CTP synthase;protein_id=OAX71342.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 22805 23758 . - . ID=gene-A3216_06420;Name=A3216_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06420 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 22805 23758 . - 0 ID=cds-OAX71326.1;Parent=gene-A3216_06420;Dbxref=NCBI_GP:OAX71326.1;Name=OAX71326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008257565.1;locus_tag=A3216_06420;product=channel-forming protein;protein_id=OAX71326.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 23780 24961 . - . ID=gene-A3216_06425;Name=A3216_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06425 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 23780 24961 . - 0 ID=cds-OAX71327.1;Parent=gene-A3216_06425;Dbxref=NCBI_GP:OAX71327.1;Name=OAX71327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815886.1;locus_tag=A3216_06425;product=thiamine pyrophosphokinase;protein_id=OAX71327.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 25147 26910 . - . ID=gene-A3216_06430;Name=A3216_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06430 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 25147 26910 . - 0 ID=cds-OAX71328.1;Parent=gene-A3216_06430;Dbxref=NCBI_GP:OAX71328.1;Name=OAX71328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49896.1;locus_tag=A3216_06430;product=DNA repair protein RecN;protein_id=OAX71328.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 26934 27869 . - . ID=gene-A3216_06435;Name=A3216_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06435 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 26934 27869 . - 0 ID=cds-OAX71329.1;Parent=gene-A3216_06435;Dbxref=NCBI_GP:OAX71329.1;Name=OAX71329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49897.1;locus_tag=A3216_06435;product=NAD kinase;protein_id=OAX71329.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 27866 28675 . - . ID=gene-A3216_06440;Name=A3216_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06440 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 27866 28675 . - 0 ID=cds-OAX71330.1;Parent=gene-A3216_06440;Dbxref=NCBI_GP:OAX71330.1;Name=OAX71330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876315.1;locus_tag=A3216_06440;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase;protein_id=OAX71330.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 28683 28868 . - . ID=gene-A3216_06445;Name=A3216_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06445 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 28683 28868 . - 0 ID=cds-OAX71331.1;Parent=gene-A3216_06445;Dbxref=NCBI_GP:OAX71331.1;Name=OAX71331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876314.1;locus_tag=A3216_06445;product=hypothetical protein;protein_id=OAX71331.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 29266 29649 . + . ID=gene-A3216_06450;Name=A3216_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06450 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 29266 29649 . + 0 ID=cds-OAX71332.1;Parent=gene-A3216_06450;Dbxref=NCBI_GP:OAX71332.1;Name=OAX71332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06450;product=hypothetical protein;protein_id=OAX71332.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 31874 33303 . + . ID=gene-A3216_06455;Name=A3216_06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06455;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 31874 33303 . + 0 ID=cds-A3216_06455;Parent=gene-A3216_06455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787626.1;locus_tag=A3216_06455;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 33329 34609 . - . ID=gene-A3216_06460;Name=A3216_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06460 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 33329 34609 . - 0 ID=cds-OAX71343.1;Parent=gene-A3216_06460;Dbxref=NCBI_GP:OAX71343.1;Name=OAX71343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49900.3;locus_tag=A3216_06460;product=tyrosine--tRNA ligase;protein_id=OAX71343.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 34620 35264 . - . ID=gene-A3216_06465;Name=A3216_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06465 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 34620 35264 . - 0 ID=cds-OAX71344.1;Parent=gene-A3216_06465;Dbxref=NCBI_GP:OAX71344.1;Name=OAX71344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05678.2;locus_tag=A3216_06465;product=3-methyladenine DNA glycosylase;protein_id=OAX71344.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 35393 36104 . + . ID=gene-A3216_06470;Name=A3216_06470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06470;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 35393 36104 . + 0 ID=cds-A3216_06470;Parent=gene-A3216_06470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009977263.1;locus_tag=A3216_06470;product=multidrug ABC transporter ATP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 36179 36846 . + . ID=gene-A3216_06475;Name=A3216_06475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06475;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 36179 36846 . + 0 ID=cds-A3216_06475;Parent=gene-A3216_06475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007775982.1;locus_tag=A3216_06475;product=antibiotic ABC transporter permease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 37437 37670 . - . ID=gene-A3216_06480;Name=A3216_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06480 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 37437 37670 . - 0 ID=cds-OAX71333.1;Parent=gene-A3216_06480;Dbxref=NCBI_GP:OAX71333.1;Name=OAX71333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908285.1;locus_tag=A3216_06480;product=hypothetical protein;protein_id=OAX71333.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 37663 40671 . - . ID=gene-A3216_06485;Name=A3216_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06485 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 37663 40671 . - 0 ID=cds-OAX71345.1;Parent=gene-A3216_06485;Dbxref=NCBI_GP:OAX71345.1;Name=OAX71345.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908284.1;locus_tag=A3216_06485;product=acyl-CoA synthetase;protein_id=OAX71345.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 42292 42480 . - . ID=gene-A3216_06490;Name=A3216_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06490 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 42292 42480 . - 0 ID=cds-OAX71334.1;Parent=gene-A3216_06490;Dbxref=NCBI_GP:OAX71334.1;Name=OAX71334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06490;product=hypothetical protein;protein_id=OAX71334.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 43542 43802 . + . ID=gene-A3216_06495;Name=A3216_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06495 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 43542 43802 . + 0 ID=cds-OAX71335.1;Parent=gene-A3216_06495;Dbxref=NCBI_GP:OAX71335.1;Name=OAX71335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908283.1;locus_tag=A3216_06495;product=hypothetical protein;protein_id=OAX71335.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 43892 43966 . - . ID=gene-A3216_06500;Name=A3216_06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_06500 GCA_001648835.1|LVXE01000016.1 tRNAscan-SE tRNA 43892 43966 . - . ID=rna-A3216_06500;Parent=gene-A3216_06500;anticodon=(pos:complement(43932..43934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06500;product=tRNA-Val GCA_001648835.1|LVXE01000016.1 tRNAscan-SE exon 43892 43966 . - . ID=exon-A3216_06500-1;Parent=rna-A3216_06500;anticodon=(pos:complement(43932..43934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06500;product=tRNA-Val GCA_001648835.1|LVXE01000016.1 Genbank gene 44145 44220 . + . ID=gene-A3216_06505;Name=A3216_06505;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_06505 GCA_001648835.1|LVXE01000016.1 tRNAscan-SE tRNA 44145 44220 . + . ID=rna-A3216_06505;Parent=gene-A3216_06505;anticodon=(pos:44178..44180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06505;product=tRNA-Gly GCA_001648835.1|LVXE01000016.1 tRNAscan-SE exon 44145 44220 . + . ID=exon-A3216_06505-1;Parent=rna-A3216_06505;anticodon=(pos:44178..44180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06505;product=tRNA-Gly GCA_001648835.1|LVXE01000016.1 Genbank gene 44246 44319 . + . ID=gene-A3216_06510;Name=A3216_06510;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_06510 GCA_001648835.1|LVXE01000016.1 tRNAscan-SE tRNA 44246 44319 . + . ID=rna-A3216_06510;Parent=gene-A3216_06510;anticodon=(pos:44278..44280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06510;product=tRNA-Cys GCA_001648835.1|LVXE01000016.1 tRNAscan-SE exon 44246 44319 . + . ID=exon-A3216_06510-1;Parent=rna-A3216_06510;anticodon=(pos:44278..44280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06510;product=tRNA-Cys GCA_001648835.1|LVXE01000016.1 Genbank gene 44334 44408 . + . ID=gene-A3216_06515;Name=A3216_06515;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_06515 GCA_001648835.1|LVXE01000016.1 tRNAscan-SE tRNA 44334 44408 . + . ID=rna-A3216_06515;Parent=gene-A3216_06515;anticodon=(pos:44366..44368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06515;product=tRNA-Val GCA_001648835.1|LVXE01000016.1 tRNAscan-SE exon 44334 44408 . + . ID=exon-A3216_06515-1;Parent=rna-A3216_06515;anticodon=(pos:44366..44368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_06515;product=tRNA-Val GCA_001648835.1|LVXE01000016.1 Genbank gene 44933 45136 . + . ID=gene-A3216_06520;Name=A3216_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06520 GCA_001648835.1|LVXE01000016.1 GeneMarkS+ CDS 44933 45136 . + 0 ID=cds-OAX71336.1;Parent=gene-A3216_06520;Dbxref=NCBI_GP:OAX71336.1;Name=OAX71336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06520;product=hypothetical protein;protein_id=OAX71336.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank pseudogene 46450 47560 . - . ID=gene-A3216_06525;Name=A3216_06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06525;pseudo=true GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 46450 47560 . - 0 ID=cds-A3216_06525;Parent=gene-A3216_06525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382904.1;locus_tag=A3216_06525;product=ATPase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 47596 48402 . + . ID=gene-A3216_06530;Name=A3216_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06530 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 47596 48402 . + 0 ID=cds-OAX71337.1;Parent=gene-A3216_06530;Dbxref=NCBI_GP:OAX71337.1;Name=OAX71337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908282.1;locus_tag=A3216_06530;product=hypothetical protein;protein_id=OAX71337.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 48416 49993 . + . ID=gene-A3216_06535;Name=A3216_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06535 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 48416 49993 . + 0 ID=cds-OAX71338.1;Parent=gene-A3216_06535;Dbxref=NCBI_GP:OAX71338.1;Name=OAX71338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908281.1;locus_tag=A3216_06535;product=protease;protein_id=OAX71338.1;transl_table=11 GCA_001648835.1|LVXE01000016.1 Genbank gene 50013 51335 . + . ID=gene-A3216_06540;Name=A3216_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06540 GCA_001648835.1|LVXE01000016.1 Protein Homology CDS 50013 51335 . + 0 ID=cds-OAX71339.1;Parent=gene-A3216_06540;Dbxref=NCBI_GP:OAX71339.1;Name=OAX71339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908280.1;locus_tag=A3216_06540;product=hypothetical protein;protein_id=OAX71339.1;transl_table=11 ##sequence-region LVXE01000017.1 1 70768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000017.1 Genbank region 1 70768 . + . ID=LVXE01000017.1:1..70768;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 156 917 . - . ID=gene-A3216_06545;Name=A3216_06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06545;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 156 917 . - 0 ID=cds-A3216_06545;Parent=gene-A3216_06545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003414047.1;locus_tag=A3216_06545;product=methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 998 1791 . - . ID=gene-A3216_06550;Name=A3216_06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06550;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 998 1791 . - 0 ID=cds-A3216_06550;Parent=gene-A3216_06550;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014213837.1;locus_tag=A3216_06550;product=3-ketoacyl-ACP reductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 2193 4853 . + . ID=gene-A3216_06555;Name=A3216_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06555 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 2193 4853 . + 0 ID=cds-OAX71269.1;Parent=gene-A3216_06555;Dbxref=NCBI_GP:OAX71269.1;Name=OAX71269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908050.1;locus_tag=A3216_06555;product=cell division protein FtsK;protein_id=OAX71269.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 4863 5405 . - . ID=gene-A3216_06560;Name=A3216_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06560 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 4863 5405 . - 0 ID=cds-OAX71270.1;Parent=gene-A3216_06560;Dbxref=NCBI_GP:OAX71270.1;Name=OAX71270.1;Note=catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171536.1;locus_tag=A3216_06560;product=N-acetylglutamate synthase;protein_id=OAX71270.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 5472 6053 . + . ID=gene-A3216_06565;Name=A3216_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06565 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 5472 6053 . + 0 ID=cds-OAX71271.1;Parent=gene-A3216_06565;Dbxref=NCBI_GP:OAX71271.1;Name=OAX71271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908052.1;locus_tag=A3216_06565;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OAX71271.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 6588 7419 . + . ID=gene-A3216_06570;Name=A3216_06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06570;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 6588 7419 . + 0 ID=cds-A3216_06570;Parent=gene-A3216_06570;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942572.1;locus_tag=A3216_06570;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 7451 8302 . + . ID=gene-A3216_06575;Name=A3216_06575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06575;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 7451 8302 . + 0 ID=cds-A3216_06575;Parent=gene-A3216_06575;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007774974.1;locus_tag=A3216_06575;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 8721 9155 . - . ID=gene-A3216_06580;Name=A3216_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06580 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 8721 9155 . - 0 ID=cds-OAX71310.1;Parent=gene-A3216_06580;Dbxref=NCBI_GP:OAX71310.1;Name=OAX71310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956010.1;locus_tag=A3216_06580;product=limonene-1%2C2-epoxide hydrolase;protein_id=OAX71310.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 9207 10385 . + . ID=gene-A3216_06585;Name=A3216_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06585 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 9207 10385 . + 0 ID=cds-OAX71272.1;Parent=gene-A3216_06585;Dbxref=NCBI_GP:OAX71272.1;Name=OAX71272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908054.1;locus_tag=A3216_06585;product=glycosyl transferase;protein_id=OAX71272.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 10399 10602 . + . ID=gene-A3216_06590;Name=A3216_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06590 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 10399 10602 . + 0 ID=cds-OAX71309.1;Parent=gene-A3216_06590;Dbxref=NCBI_GP:OAX71309.1;Name=OAX71309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908055.1;locus_tag=A3216_06590;product=signal transduction histidine kinase;protein_id=OAX71309.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 10753 12888 . + . ID=gene-A3216_06595;Name=A3216_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06595 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 10753 12888 . + 0 ID=cds-OAX71273.1;Parent=gene-A3216_06595;Dbxref=NCBI_GP:OAX71273.1;Name=OAX71273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019735100.1;locus_tag=A3216_06595;product=recombinase RecA;protein_id=OAX71273.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 12854 13369 . + . ID=gene-A3216_06600;Name=A3216_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06600 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 12854 13369 . + 0 ID=cds-OAX71274.1;Parent=gene-A3216_06600;Dbxref=NCBI_GP:OAX71274.1;Name=OAX71274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875211.1;locus_tag=A3216_06600;product=recombination regulator RecX;protein_id=OAX71274.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 13428 14981 . + . ID=gene-A3216_06605;Name=A3216_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06605 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 13428 14981 . + 0 ID=cds-OAX71311.1;Parent=gene-A3216_06605;Dbxref=NCBI_GP:OAX71311.1;Name=OAX71311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49842.2;locus_tag=A3216_06605;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=OAX71311.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 14978 15607 . + . ID=gene-A3216_06610;Name=A3216_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06610 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 14978 15607 . + 0 ID=cds-OAX71275.1;Parent=gene-A3216_06610;Dbxref=NCBI_GP:OAX71275.1;Name=OAX71275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908059.1;locus_tag=A3216_06610;product=hypothetical protein;protein_id=OAX71275.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 15604 16835 . - . ID=gene-A3216_06615;Name=A3216_06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06615;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 15604 16835 . - 0 ID=cds-A3216_06615;Parent=gene-A3216_06615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787999.1;locus_tag=A3216_06615;product=DNA repair ATPase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 18900 19301 . + . ID=gene-A3216_06620;Name=A3216_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06620 GCA_001648835.1|LVXE01000017.1 GeneMarkS+ CDS 18900 19301 . + 0 ID=cds-OAX71276.1;Parent=gene-A3216_06620;Dbxref=NCBI_GP:OAX71276.1;Name=OAX71276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06620;product=hypothetical protein;protein_id=OAX71276.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 19779 20000 . + . ID=gene-A3216_06625;Name=A3216_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06625 GCA_001648835.1|LVXE01000017.1 GeneMarkS+ CDS 19779 20000 . + 0 ID=cds-OAX71277.1;Parent=gene-A3216_06625;Dbxref=NCBI_GP:OAX71277.1;Name=OAX71277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06625;product=hypothetical protein;protein_id=OAX71277.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 20317 21015 . + . ID=gene-A3216_06630;Name=A3216_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06630 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 20317 21015 . + 0 ID=cds-OAX71278.1;Parent=gene-A3216_06630;Dbxref=NCBI_GP:OAX71278.1;Name=OAX71278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908060.1;locus_tag=A3216_06630;product=hypothetical protein;protein_id=OAX71278.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 21012 21947 . + . ID=gene-A3216_06635;Name=A3216_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06635 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 21012 21947 . + 0 ID=cds-OAX71279.1;Parent=gene-A3216_06635;Dbxref=NCBI_GP:OAX71279.1;Name=OAX71279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46811.1;locus_tag=A3216_06635;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=OAX71279.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 22014 22904 . + . ID=gene-A3216_06640;Name=A3216_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06640 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 22014 22904 . + 0 ID=cds-OAX71280.1;Parent=gene-A3216_06640;Dbxref=NCBI_GP:OAX71280.1;Name=OAX71280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46814.1;locus_tag=A3216_06640;product=diaminopimelate epimerase;protein_id=OAX71280.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 22967 24433 . + . ID=gene-A3216_06645;Name=A3216_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06645 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 22967 24433 . + 0 ID=cds-OAX71281.1;Parent=gene-A3216_06645;Dbxref=NCBI_GP:OAX71281.1;Name=OAX71281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908063.1;locus_tag=A3216_06645;product=GTPase HflX;protein_id=OAX71281.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 24590 25757 . + . ID=gene-A3216_06650;Name=A3216_06650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06650;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 24590 25757 . + 0 ID=cds-A3216_06650;Parent=gene-A3216_06650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019969308.1;locus_tag=A3216_06650;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 27969 28154 . + . ID=gene-A3216_06655;Name=A3216_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06655 GCA_001648835.1|LVXE01000017.1 GeneMarkS+ CDS 27969 28154 . + 0 ID=cds-OAX71282.1;Parent=gene-A3216_06655;Dbxref=NCBI_GP:OAX71282.1;Name=OAX71282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06655;product=hypothetical protein;protein_id=OAX71282.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 30296 30571 . - . ID=gene-A3216_06660;Name=A3216_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06660 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 30296 30571 . - 0 ID=cds-OAX71283.1;Parent=gene-A3216_06660;Dbxref=NCBI_GP:OAX71283.1;Name=OAX71283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908064.1;locus_tag=A3216_06660;product=hypothetical protein;protein_id=OAX71283.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 30616 32679 . + . ID=gene-A3216_06665;Name=A3216_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06665 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 30616 32679 . + 0 ID=cds-OAX71284.1;Parent=gene-A3216_06665;Dbxref=NCBI_GP:OAX71284.1;Name=OAX71284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908065.1;locus_tag=A3216_06665;product=hypothetical protein;protein_id=OAX71284.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 32718 33425 . - . ID=gene-A3216_06670;Name=A3216_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06670 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 32718 33425 . - 0 ID=cds-OAX71285.1;Parent=gene-A3216_06670;Dbxref=NCBI_GP:OAX71285.1;Name=OAX71285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8ZQU5.1;locus_tag=A3216_06670;product=repressor LexA;protein_id=OAX71285.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 33705 34199 . + . ID=gene-A3216_06675;Name=A3216_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06675 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 33705 34199 . + 0 ID=cds-OAX71286.1;Parent=gene-A3216_06675;Dbxref=NCBI_GP:OAX71286.1;Name=OAX71286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908067.1;locus_tag=A3216_06675;product=hypothetical protein;protein_id=OAX71286.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 34361 34825 . + . ID=gene-A3216_06680;Name=A3216_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06680 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 34361 34825 . + 0 ID=cds-OAX71287.1;Parent=gene-A3216_06680;Dbxref=NCBI_GP:OAX71287.1;Name=OAX71287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49844.1;locus_tag=A3216_06680;product=transcriptional regulator NrdR;protein_id=OAX71287.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 34867 35352 . + . ID=gene-A3216_06685;Name=A3216_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06685 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 34867 35352 . + 0 ID=cds-OAX71288.1;Parent=gene-A3216_06685;Dbxref=NCBI_GP:OAX71288.1;Name=OAX71288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955003.1;locus_tag=A3216_06685;product=fatty acid-binding-like protein;protein_id=OAX71288.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 36148 37188 . - . ID=gene-A3216_06690;Name=A3216_06690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06690;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 36148 37188 . - 0 ID=cds-A3216_06690;Parent=gene-A3216_06690;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815405.1;locus_tag=A3216_06690;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 37216 38196 . - . ID=gene-A3216_06695;Name=A3216_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06695 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 37216 38196 . - 0 ID=cds-OAX71289.1;Parent=gene-A3216_06695;Dbxref=NCBI_GP:OAX71289.1;Name=OAX71289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908070.1;locus_tag=A3216_06695;product=proteasome protein;protein_id=OAX71289.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 38439 39261 . + . ID=gene-A3216_06700;Name=A3216_06700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06700;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 38439 39261 . + 0 ID=cds-A3216_06700;Parent=gene-A3216_06700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007774896.1;locus_tag=A3216_06700;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 39242 40665 . - . ID=gene-A3216_06705;Name=A3216_06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06705;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 39242 40665 . - 0 ID=cds-A3216_06705;Parent=gene-A3216_06705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003413967.1;locus_tag=A3216_06705;product=NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 41178 41870 . - . ID=gene-A3216_06710;Name=A3216_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06710 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 41178 41870 . - 0 ID=cds-OAX71290.1;Parent=gene-A3216_06710;Dbxref=NCBI_GP:OAX71290.1;Name=OAX71290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003880574.1;locus_tag=A3216_06710;product=dihydrofolate reductase;protein_id=OAX71290.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 42027 42986 . - . ID=gene-A3216_06715;Name=A3216_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06715 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 42027 42986 . - 0 ID=cds-OAX71291.1;Parent=gene-A3216_06715;Dbxref=NCBI_GP:OAX71291.1;Name=OAX71291.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma factors in this cluster are active during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908074.1;locus_tag=A3216_06715;product=RNA polymerase subunit sigma;protein_id=OAX71291.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 43153 43572 . - . ID=gene-A3216_06720;Name=A3216_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06720 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 43153 43572 . - 0 ID=cds-OAX71292.1;Parent=gene-A3216_06720;Dbxref=NCBI_GP:OAX71292.1;Name=OAX71292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908075.1;locus_tag=A3216_06720;product=hypothetical protein;protein_id=OAX71292.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 43684 43923 . + . ID=gene-A3216_06725;Name=A3216_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06725 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 43684 43923 . + 0 ID=cds-OAX71293.1;Parent=gene-A3216_06725;Dbxref=NCBI_GP:OAX71293.1;Name=OAX71293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008258553.1;locus_tag=A3216_06725;product=hypothetical protein;protein_id=OAX71293.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 43910 44902 . - . ID=gene-A3216_06730;Name=A3216_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06730 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 43910 44902 . - 0 ID=cds-OAX71294.1;Parent=gene-A3216_06730;Dbxref=NCBI_GP:OAX71294.1;Name=OAX71294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908077.1;locus_tag=A3216_06730;product=ribonuclease BN;protein_id=OAX71294.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 44907 45122 . - . ID=gene-A3216_06735;Name=A3216_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06735 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 44907 45122 . - 0 ID=cds-OAX71295.1;Parent=gene-A3216_06735;Dbxref=NCBI_GP:OAX71295.1;Name=OAX71295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908078.1;locus_tag=A3216_06735;product=hypothetical protein;protein_id=OAX71295.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 46882 48606 . - . ID=gene-A3216_06740;Name=A3216_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06740 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 46882 48606 . - 0 ID=cds-OAX71296.1;Parent=gene-A3216_06740;Dbxref=NCBI_GP:OAX71296.1;Name=OAX71296.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908079.1;locus_tag=A3216_06740;product=RNA polymerase sigma factor;protein_id=OAX71296.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 48617 49438 . - . ID=gene-A3216_06745;Name=A3216_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06745 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 48617 49438 . - 0 ID=cds-OAX71312.1;Parent=gene-A3216_06745;Dbxref=NCBI_GP:OAX71312.1;Name=OAX71312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955735.1;locus_tag=A3216_06745;product=polyphosphate glucokinase;protein_id=OAX71312.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 49540 50387 . + . ID=gene-A3216_06750;Name=A3216_06750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06750;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 49540 50387 . + 0 ID=cds-A3216_06750;Parent=gene-A3216_06750;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46813.1;locus_tag=A3216_06750;product=inositol monophosphatase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 50391 51041 . - . ID=gene-A3216_06755;Name=A3216_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06755 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 50391 51041 . - 0 ID=cds-OAX71297.1;Parent=gene-A3216_06755;Dbxref=NCBI_GP:OAX71297.1;Name=OAX71297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008258545.1;locus_tag=A3216_06755;product=hypothetical protein;protein_id=OAX71297.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 51237 51539 . + . ID=gene-A3216_06760;Name=A3216_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06760 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 51237 51539 . + 0 ID=cds-OAX71298.1;Parent=gene-A3216_06760;Dbxref=NCBI_GP:OAX71298.1;Name=OAX71298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005513624.1;locus_tag=A3216_06760;product=dUTPase;protein_id=OAX71298.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 51544 52017 . - . ID=gene-A3216_06765;Name=A3216_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06765 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 51544 52017 . - 0 ID=cds-OAX71299.1;Parent=gene-A3216_06765;Dbxref=NCBI_GP:OAX71299.1;Name=OAX71299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908084.1;locus_tag=A3216_06765;product=hypothetical protein;protein_id=OAX71299.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 52043 52507 . + . ID=gene-A3216_06770;Name=A3216_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06770 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 52043 52507 . + 0 ID=cds-OAX71300.1;Parent=gene-A3216_06770;Dbxref=NCBI_GP:OAX71300.1;Name=OAX71300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49992.3;locus_tag=A3216_06770;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=OAX71300.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 52555 53325 . + . ID=gene-A3216_06775;Name=A3216_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06775 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 52555 53325 . + 0 ID=cds-OAX71313.1;Parent=gene-A3216_06775;Dbxref=NCBI_GP:OAX71313.1;Name=OAX71313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955727.1;locus_tag=A3216_06775;product=hypothetical protein;protein_id=OAX71313.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 53370 54068 . - . ID=gene-A3216_06780;Name=A3216_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06780 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 53370 54068 . - 0 ID=cds-OAX71301.1;Parent=gene-A3216_06780;Dbxref=NCBI_GP:OAX71301.1;Name=OAX71301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908087.1;locus_tag=A3216_06780;product=hypothetical protein;protein_id=OAX71301.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 55760 55951 . + . ID=gene-A3216_06785;Name=A3216_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06785 GCA_001648835.1|LVXE01000017.1 GeneMarkS+ CDS 55760 55951 . + 0 ID=cds-OAX71302.1;Parent=gene-A3216_06785;Dbxref=NCBI_GP:OAX71302.1;Name=OAX71302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06785;product=hypothetical protein;protein_id=OAX71302.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 56196 56895 . + . ID=gene-A3216_06790;Name=A3216_06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06790;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 56196 56895 . + 0 ID=cds-A3216_06790;Parent=gene-A3216_06790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020728419.1;locus_tag=A3216_06790;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 56906 58195 . - . ID=gene-A3216_06795;Name=A3216_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06795 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 56906 58195 . - 0 ID=cds-OAX71303.1;Parent=gene-A3216_06795;Dbxref=NCBI_GP:OAX71303.1;Name=OAX71303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46838.2;locus_tag=A3216_06795;product=hypothetical protein;protein_id=OAX71303.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 58248 58691 . - . ID=gene-A3216_06800;Name=A3216_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06800 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 58248 58691 . - 0 ID=cds-OAX71304.1;Parent=gene-A3216_06800;Dbxref=NCBI_GP:OAX71304.1;Name=OAX71304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815436.1;locus_tag=A3216_06800;product=hypothetical protein;protein_id=OAX71304.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 58884 60815 . + . ID=gene-A3216_06805;Name=A3216_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06805 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 58884 60815 . + 0 ID=cds-OAX71314.1;Parent=gene-A3216_06805;Dbxref=NCBI_GP:OAX71314.1;Name=OAX71314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50000.2;locus_tag=A3216_06805;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=OAX71314.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 62916 64205 . - . ID=gene-A3216_06810;Name=A3216_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06810 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 62916 64205 . - 0 ID=cds-OAX71305.1;Parent=gene-A3216_06810;Dbxref=NCBI_GP:OAX71305.1;Name=OAX71305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908091.1;locus_tag=A3216_06810;product=3'-5' exonuclease;protein_id=OAX71305.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 64207 64788 . - . ID=gene-A3216_06815;Name=A3216_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06815 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 64207 64788 . - 0 ID=cds-OAX71315.1;Parent=gene-A3216_06815;Dbxref=NCBI_GP:OAX71315.1;Name=OAX71315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355345.1;locus_tag=A3216_06815;product=hypothetical protein;protein_id=OAX71315.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 65886 66959 . + . ID=gene-A3216_06820;Name=A3216_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06820 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 65886 66959 . + 0 ID=cds-OAX71306.1;Parent=gene-A3216_06820;Dbxref=NCBI_GP:OAX71306.1;Name=OAX71306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46809.2;locus_tag=A3216_06820;product=uroporphyrinogen decarboxylase;protein_id=OAX71306.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 66956 68311 . + . ID=gene-A3216_06825;Name=A3216_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06825 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 66956 68311 . + 0 ID=cds-OAX71307.1;Parent=gene-A3216_06825;Dbxref=NCBI_GP:OAX71307.1;Name=OAX71307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50008.1;locus_tag=A3216_06825;product=protoporphyrinogen oxidase;protein_id=OAX71307.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank gene 68317 69012 . + . ID=gene-A3216_06830;Name=A3216_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06830 GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 68317 69012 . + 0 ID=cds-OAX71308.1;Parent=gene-A3216_06830;Dbxref=NCBI_GP:OAX71308.1;Name=OAX71308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908095.1;locus_tag=A3216_06830;product=hypothetical protein;protein_id=OAX71308.1;transl_table=11 GCA_001648835.1|LVXE01000017.1 Genbank pseudogene 69053 69783 . + . ID=gene-A3216_06835;Name=A3216_06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06835;pseudo=true GCA_001648835.1|LVXE01000017.1 Protein Homology CDS 69053 69783 . + 0 ID=cds-A3216_06835;Parent=gene-A3216_06835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019969365.1;locus_tag=A3216_06835;product=methyltransferase;pseudo=true;transl_table=11 ##sequence-region LVXE01000018.1 1 48400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000018.1 Genbank region 1 48400 . + . ID=LVXE01000018.1:1..48400;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000018.1 Genbank gene 59 1168 . - . ID=gene-A3216_06840;Name=A3216_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06840 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 59 1168 . - 0 ID=cds-OAX71246.1;Parent=gene-A3216_06840;Dbxref=NCBI_GP:OAX71246.1;Name=OAX71246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57240.1;locus_tag=A3216_06840;product=inositol 1-phosphate synthase;protein_id=OAX71246.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank pseudogene 1249 1838 . - . ID=gene-A3216_06845;Name=A3216_06845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06845;pseudo=true GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 1249 1838 . - 0 ID=cds-A3216_06845;Parent=gene-A3216_06845;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008262664.1;locus_tag=A3216_06845;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 3019 3453 . + . ID=gene-A3216_06850;Name=A3216_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06850 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 3019 3453 . + 0 ID=cds-OAX71247.1;Parent=gene-A3216_06850;Dbxref=NCBI_GP:OAX71247.1;Name=OAX71247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014818433.1;locus_tag=A3216_06850;product=hypothetical protein;protein_id=OAX71247.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 3851 5977 . + . ID=gene-A3216_06855;Name=A3216_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06855 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 3851 5977 . + 0 ID=cds-OAX71267.1;Parent=gene-A3216_06855;Dbxref=NCBI_GP:OAX71267.1;Name=OAX71267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909034.1;locus_tag=A3216_06855;product=penicillin-binding protein;protein_id=OAX71267.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 5974 7668 . + . ID=gene-A3216_06860;Name=A3216_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06860 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 5974 7668 . + 0 ID=cds-OAX71248.1;Parent=gene-A3216_06860;Dbxref=NCBI_GP:OAX71248.1;Name=OAX71248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909033.1;locus_tag=A3216_06860;product=hypothetical protein;protein_id=OAX71248.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 7972 8208 . + . ID=gene-A3216_06865;Name=A3216_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06865 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 7972 8208 . + 0 ID=cds-OAX71249.1;Parent=gene-A3216_06865;Dbxref=NCBI_GP:OAX71249.1;Name=OAX71249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06865;product=hypothetical protein;protein_id=OAX71249.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 8216 8506 . + . ID=gene-A3216_06870;Name=A3216_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06870 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 8216 8506 . + 0 ID=cds-OAX71250.1;Parent=gene-A3216_06870;Dbxref=NCBI_GP:OAX71250.1;Name=OAX71250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020099843.1;locus_tag=A3216_06870;product=30S ribosomal protein S6;protein_id=OAX71250.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 8666 9172 . + . ID=gene-A3216_06875;Name=A3216_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06875 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 8666 9172 . + 0 ID=cds-OAX71251.1;Parent=gene-A3216_06875;Dbxref=NCBI_GP:OAX71251.1;Name=OAX71251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014710765.1;locus_tag=A3216_06875;product=single-stranded DNA-binding protein;protein_id=OAX71251.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 9198 9452 . + . ID=gene-A3216_06880;Name=A3216_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06880 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 9198 9452 . + 0 ID=cds-OAX71252.1;Parent=gene-A3216_06880;Dbxref=NCBI_GP:OAX71252.1;Name=OAX71252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909030.1;locus_tag=A3216_06880;product=30S ribosomal protein S18;protein_id=OAX71252.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 9500 9958 . + . ID=gene-A3216_06885;Name=A3216_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06885 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 9500 9958 . + 0 ID=cds-OAX71253.1;Parent=gene-A3216_06885;Dbxref=NCBI_GP:OAX71253.1;Name=OAX71253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46385.1;locus_tag=A3216_06885;product=50S ribosomal protein L9;protein_id=OAX71253.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 10508 12322 . + . ID=gene-A3216_06890;Name=A3216_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06890 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 10508 12322 . + 0 ID=cds-OAX71254.1;Parent=gene-A3216_06890;Dbxref=NCBI_GP:OAX71254.1;Name=OAX71254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46394.2;locus_tag=A3216_06890;product=replicative DNA helicase;protein_id=OAX71254.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 13510 14079 . - . ID=gene-A3216_06895;Name=A3216_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06895 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 13510 14079 . - 0 ID=cds-OAX71255.1;Parent=gene-A3216_06895;Dbxref=NCBI_GP:OAX71255.1;Name=OAX71255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06895;product=hypothetical protein;protein_id=OAX71255.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 14554 17208 . - . ID=gene-A3216_06900;Name=A3216_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06900 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 14554 17208 . - 0 ID=cds-OAX71256.1;Parent=gene-A3216_06900;Dbxref=NCBI_GP:OAX71256.1;Name=OAX71256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355848.1;locus_tag=A3216_06900;product=hypothetical protein;protein_id=OAX71256.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 17232 20234 . - . ID=gene-A3216_06905;Name=A3216_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06905 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 17232 20234 . - 0 ID=cds-OAX71257.1;Parent=gene-A3216_06905;Dbxref=NCBI_GP:OAX71257.1;Name=OAX71257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909026.1;locus_tag=A3216_06905;product=hypothetical protein;protein_id=OAX71257.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 20231 20941 . - . ID=gene-A3216_06910;Name=A3216_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06910 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 20231 20941 . - 0 ID=cds-OAX71258.1;Parent=gene-A3216_06910;Dbxref=NCBI_GP:OAX71258.1;Name=OAX71258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909025.1;locus_tag=A3216_06910;product=TetR family transcriptional regulator;protein_id=OAX71258.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank pseudogene 21038 21754 . + . ID=gene-A3216_06915;Name=A3216_06915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06915;pseudo=true GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 21038 21754 . + 0 ID=cds-A3216_06915;Parent=gene-A3216_06915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167085.1;locus_tag=A3216_06915;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 24112 24402 . + . ID=gene-A3216_06920;Name=A3216_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06920 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 24112 24402 . + 0 ID=cds-OAX71259.1;Parent=gene-A3216_06920;Dbxref=NCBI_GP:OAX71259.1;Name=OAX71259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06920;product=hypothetical protein;protein_id=OAX71259.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 25941 26186 . - . ID=gene-A3216_06925;Name=A3216_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06925 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 25941 26186 . - 0 ID=cds-OAX71260.1;Parent=gene-A3216_06925;Dbxref=NCBI_GP:OAX71260.1;Name=OAX71260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06925;product=hypothetical protein;protein_id=OAX71260.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank pseudogene 28014 29346 . - . ID=gene-A3216_06930;Name=A3216_06930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06930;pseudo=true GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 28014 29346 . - 0 ID=cds-A3216_06930;Parent=gene-A3216_06930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876906.1;locus_tag=A3216_06930;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 29745 31985 . + . ID=gene-A3216_06935;Name=A3216_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06935 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 29745 31985 . + 0 ID=cds-OAX71261.1;Parent=gene-A3216_06935;Dbxref=NCBI_GP:OAX71261.1;Name=OAX71261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909024.1;locus_tag=A3216_06935;product=isocitrate dehydrogenase%2C NADP-dependent;protein_id=OAX71261.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 33093 37922 . - . ID=gene-A3216_06940;Name=A3216_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06940 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 33093 37922 . - 0 ID=cds-OAX71262.1;Parent=gene-A3216_06940;Dbxref=NCBI_GP:OAX71262.1;Name=OAX71262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O53114.1;locus_tag=A3216_06940;product=HAD family hydrolase;protein_id=OAX71262.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 38838 39050 . - . ID=gene-A3216_06945;Name=A3216_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06945 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 38838 39050 . - 0 ID=cds-OAX71263.1;Parent=gene-A3216_06945;Dbxref=NCBI_GP:OAX71263.1;Name=OAX71263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06945;product=hypothetical protein;protein_id=OAX71263.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 41390 41782 . - . ID=gene-A3216_06950;Name=A3216_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06950 GCA_001648835.1|LVXE01000018.1 GeneMarkS+ CDS 41390 41782 . - 0 ID=cds-OAX71264.1;Parent=gene-A3216_06950;Dbxref=NCBI_GP:OAX71264.1;Name=OAX71264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06950;product=hypothetical protein;protein_id=OAX71264.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 42671 44671 . + . ID=gene-A3216_06955;Name=A3216_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06955 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 42671 44671 . + 0 ID=cds-OAX71268.1;Parent=gene-A3216_06955;Dbxref=NCBI_GP:OAX71268.1;Name=OAX71268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874258.1;locus_tag=A3216_06955;product=hypothetical protein;protein_id=OAX71268.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 44885 45205 . - . ID=gene-A3216_06960;Name=A3216_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06960 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 44885 45205 . - 0 ID=cds-OAX71265.1;Parent=gene-A3216_06960;Dbxref=NCBI_GP:OAX71265.1;Name=OAX71265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909021.1;locus_tag=A3216_06960;product=hypothetical protein;protein_id=OAX71265.1;transl_table=11 GCA_001648835.1|LVXE01000018.1 Genbank gene 46227 48083 . + . ID=gene-A3216_06965;Name=A3216_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06965 GCA_001648835.1|LVXE01000018.1 Protein Homology CDS 46227 48083 . + 0 ID=cds-OAX71266.1;Parent=gene-A3216_06965;Dbxref=NCBI_GP:OAX71266.1;Name=OAX71266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010909020.1;locus_tag=A3216_06965;product=manganese transporter;protein_id=OAX71266.1;transl_table=11 ##sequence-region LVXE01000019.1 1 46192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000019.1 Genbank region 1 46192 . + . ID=LVXE01000019.1:1..46192;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 1 208 . + . ID=gene-A3216_06970;Name=A3216_06970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06970;pseudo=true GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 1 208 . + 1 ID=cds-A3216_06970;Parent=gene-A3216_06970;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06970;product=integrase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 1508 1796 . - . ID=gene-A3216_06975;Name=A3216_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06975;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 1508 1796 . - 0 ID=cds-A3216_06975;Parent=gene-A3216_06975;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768959.1;locus_tag=A3216_06975;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 1879 4277 . - . ID=gene-A3216_06980;Name=A3216_06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06980;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 1879 4277 . - 0 ID=cds-A3216_06980;Parent=gene-A3216_06980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874029.1;locus_tag=A3216_06980;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 4506 4706 . + . ID=gene-A3216_06985;Name=A3216_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06985 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 4506 4706 . + 0 ID=cds-OAX71218.1;Parent=gene-A3216_06985;Dbxref=NCBI_GP:OAX71218.1;Name=OAX71218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_06985;product=hypothetical protein;protein_id=OAX71218.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 5029 5325 . + . ID=gene-A3216_06990;Name=A3216_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_06990 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 5029 5325 . + 0 ID=cds-OAX71219.1;Parent=gene-A3216_06990;Dbxref=NCBI_GP:OAX71219.1;Name=OAX71219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908955.1;locus_tag=A3216_06990;product=hypothetical protein;protein_id=OAX71219.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 6432 8088 . + . ID=gene-A3216_06995;Name=A3216_06995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_06995;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 6432 8088 . + 0 ID=cds-A3216_06995;Parent=gene-A3216_06995;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385985.1;locus_tag=A3216_06995;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 8472 8744 . - . ID=gene-A3216_07000;Name=A3216_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07000 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 8472 8744 . - 0 ID=cds-OAX71220.1;Parent=gene-A3216_07000;Dbxref=NCBI_GP:OAX71220.1;Name=OAX71220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07000;product=hypothetical protein;protein_id=OAX71220.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 8957 9445 . - . ID=gene-A3216_07005;Name=A3216_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07005 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 8957 9445 . - 0 ID=cds-OAX71221.1;Parent=gene-A3216_07005;Dbxref=NCBI_GP:OAX71221.1;Name=OAX71221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908956.1;locus_tag=A3216_07005;product=oxidoreductase;protein_id=OAX71221.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 10322 10612 . + . ID=gene-A3216_07010;Name=A3216_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07010 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 10322 10612 . + 0 ID=cds-OAX71243.1;Parent=gene-A3216_07010;Dbxref=NCBI_GP:OAX71243.1;Name=OAX71243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908957.1;locus_tag=A3216_07010;product=hypothetical protein;protein_id=OAX71243.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 10964 12799 . + . ID=gene-A3216_07015;Name=A3216_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07015 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 10964 12799 . + 0 ID=cds-OAX71222.1;Parent=gene-A3216_07015;Dbxref=NCBI_GP:OAX71222.1;Name=OAX71222.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003401312.1;locus_tag=A3216_07015;product=butyryl-CoA dehydrogenase;protein_id=OAX71222.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 13221 14594 . - . ID=gene-A3216_07020;Name=A3216_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07020 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 13221 14594 . - 0 ID=cds-OAX71223.1;Parent=gene-A3216_07020;Dbxref=NCBI_GP:OAX71223.1;Name=OAX71223.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908959.1;locus_tag=A3216_07020;product=acetyl-CoA acetyltransferase;protein_id=OAX71223.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 14699 16063 . + . ID=gene-A3216_07025;Name=A3216_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07025 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 14699 16063 . + 0 ID=cds-OAX71224.1;Parent=gene-A3216_07025;Dbxref=NCBI_GP:OAX71224.1;Name=OAX71224.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383446.1;locus_tag=A3216_07025;product=3-oxoacyl-ACP reductase;protein_id=OAX71224.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 16335 16721 . - . ID=gene-A3216_07030;Name=A3216_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07030 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 16335 16721 . - 0 ID=cds-OAX71225.1;Parent=gene-A3216_07030;Dbxref=NCBI_GP:OAX71225.1;Name=OAX71225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07030;product=hypothetical protein;protein_id=OAX71225.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 17164 18006 . + . ID=gene-A3216_07035;Name=A3216_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07035 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 17164 18006 . + 0 ID=cds-OAX71226.1;Parent=gene-A3216_07035;Dbxref=NCBI_GP:OAX71226.1;Name=OAX71226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009979621.1;locus_tag=A3216_07035;product=dehydratase;protein_id=OAX71226.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 18115 18594 . + . ID=gene-A3216_07040;Name=A3216_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07040 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 18115 18594 . + 0 ID=cds-OAX71227.1;Parent=gene-A3216_07040;Dbxref=NCBI_GP:OAX71227.1;Name=OAX71227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908962.1;locus_tag=A3216_07040;product=hypothetical protein;protein_id=OAX71227.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 18997 19623 . - . ID=gene-A3216_07045;Name=A3216_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07045 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 18997 19623 . - 0 ID=cds-OAX71228.1;Parent=gene-A3216_07045;Dbxref=NCBI_GP:OAX71228.1;Name=OAX71228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908963.1;locus_tag=A3216_07045;product=TetR family transcriptional regulator;protein_id=OAX71228.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 19693 20856 . - . ID=gene-A3216_07050;Name=A3216_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07050 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 19693 20856 . - 0 ID=cds-OAX71229.1;Parent=gene-A3216_07050;Dbxref=NCBI_GP:OAX71229.1;Name=OAX71229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908964.1;locus_tag=A3216_07050;product=beta-glucosidase;protein_id=OAX71229.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 21003 21176 . + . ID=gene-A3216_07055;Name=A3216_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07055 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 21003 21176 . + 0 ID=cds-OAX71230.1;Parent=gene-A3216_07055;Dbxref=NCBI_GP:OAX71230.1;Name=OAX71230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003889056.1;locus_tag=A3216_07055;product=DUF2613 domain-containing protein;protein_id=OAX71230.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 21292 25509 . + . ID=gene-A3216_07060;Name=A3216_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07060 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 21292 25509 . + 0 ID=cds-OAX71244.1;Parent=gene-A3216_07060;Dbxref=NCBI_GP:OAX71244.1;Name=OAX71244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908966.1;locus_tag=A3216_07060;product=hypothetical protein;protein_id=OAX71244.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 25689 25925 . + . ID=gene-A3216_07065;Name=A3216_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07065 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 25689 25925 . + 0 ID=cds-OAX71231.1;Parent=gene-A3216_07065;Dbxref=NCBI_GP:OAX71231.1;Name=OAX71231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07065;product=hypothetical protein;protein_id=OAX71231.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 26270 26557 . + . ID=gene-A3216_07070;Name=A3216_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07070 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 26270 26557 . + 0 ID=cds-OAX71232.1;Parent=gene-A3216_07070;Dbxref=NCBI_GP:OAX71232.1;Name=OAX71232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07070;product=hypothetical protein;protein_id=OAX71232.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 26903 27109 . + . ID=gene-A3216_07075;Name=A3216_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07075 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 26903 27109 . + 0 ID=cds-OAX71233.1;Parent=gene-A3216_07075;Dbxref=NCBI_GP:OAX71233.1;Name=OAX71233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07075;product=hypothetical protein;protein_id=OAX71233.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 27430 27645 . - . ID=gene-A3216_07080;Name=A3216_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07080 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 27430 27645 . - 0 ID=cds-OAX71234.1;Parent=gene-A3216_07080;Dbxref=NCBI_GP:OAX71234.1;Name=OAX71234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07080;product=hypothetical protein;protein_id=OAX71234.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 27954 28148 . + . ID=gene-A3216_07085;Name=A3216_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07085 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 27954 28148 . + 0 ID=cds-OAX71235.1;Parent=gene-A3216_07085;Dbxref=NCBI_GP:OAX71235.1;Name=OAX71235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07085;product=hypothetical protein;protein_id=OAX71235.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 28419 29792 . + . ID=gene-A3216_07090;Name=A3216_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07090 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 28419 29792 . + 0 ID=cds-OAX71236.1;Parent=gene-A3216_07090;Dbxref=NCBI_GP:OAX71236.1;Name=OAX71236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69497.1;locus_tag=A3216_07090;product=NADP-dependent succinic semialdehyde dehydrogenase;protein_id=OAX71236.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 30860 31725 . - . ID=gene-A3216_07095;Name=A3216_07095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07095;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 30860 31725 . - 0 ID=cds-A3216_07095;Parent=gene-A3216_07095;Note=Catalyzes the rate-limiting step in dNTP synthesis%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015626467.1;locus_tag=A3216_07095;product=ribonucleotide-diphosphate reductase subunit beta;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 31901 32146 . - . ID=gene-A3216_07100;Name=A3216_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07100 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 31901 32146 . - 0 ID=cds-OAX71237.1;Parent=gene-A3216_07100;Dbxref=NCBI_GP:OAX71237.1;Name=OAX71237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07100;product=hypothetical protein;protein_id=OAX71237.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 32265 32574 . - . ID=gene-A3216_07105;Name=A3216_07105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07105;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 32265 32574 . - 0 ID=cds-A3216_07105;Parent=gene-A3216_07105;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015292684.1;locus_tag=A3216_07105;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 32855 34437 . - . ID=gene-A3216_07110;Name=A3216_07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07110;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 32855 34437 . - 0 ID=cds-A3216_07110;Parent=gene-A3216_07110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727873.1;locus_tag=A3216_07110;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 35539 35733 . - . ID=gene-A3216_07115;Name=A3216_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07115 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 35539 35733 . - 0 ID=cds-OAX71238.1;Parent=gene-A3216_07115;Dbxref=NCBI_GP:OAX71238.1;Name=OAX71238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07115;product=hypothetical protein;protein_id=OAX71238.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 35888 37067 . - . ID=gene-A3216_07120;Name=A3216_07120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07120;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 35888 37067 . - 0 ID=cds-A3216_07120;Parent=gene-A3216_07120;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009957637.1;locus_tag=A3216_07120;product=acyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 37273 38556 . + . ID=gene-A3216_07125;Name=A3216_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07125 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 37273 38556 . + 0 ID=cds-OAX71245.1;Parent=gene-A3216_07125;Dbxref=NCBI_GP:OAX71245.1;Name=OAX71245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908969.1;locus_tag=A3216_07125;product=hypothetical protein;protein_id=OAX71245.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 38685 40460 . + . ID=gene-A3216_07130;Name=A3216_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07130 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 38685 40460 . + 0 ID=cds-OAX71239.1;Parent=gene-A3216_07130;Dbxref=NCBI_GP:OAX71239.1;Name=OAX71239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874070.1;locus_tag=A3216_07130;product=hypothetical protein;protein_id=OAX71239.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 40823 42007 . - . ID=gene-A3216_07135;Name=A3216_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07135 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 40823 42007 . - 0 ID=cds-OAX71240.1;Parent=gene-A3216_07135;Dbxref=NCBI_GP:OAX71240.1;Name=OAX71240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908971.1;locus_tag=A3216_07135;product=glycosyl transferase;protein_id=OAX71240.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 42060 42869 . + . ID=gene-A3216_07140;Name=A3216_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07140 GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 42060 42869 . + 0 ID=cds-OAX71241.1;Parent=gene-A3216_07140;Dbxref=NCBI_GP:OAX71241.1;Name=OAX71241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69492.1;locus_tag=A3216_07140;product=SAM-dependent methyltransferase;protein_id=OAX71241.1;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank pseudogene 42934 44253 . + . ID=gene-A3216_07145;Name=A3216_07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07145;pseudo=true GCA_001648835.1|LVXE01000019.1 Protein Homology CDS 42934 44253 . + 0 ID=cds-A3216_07145;Parent=gene-A3216_07145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003899865.1;locus_tag=A3216_07145;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000019.1 Genbank gene 44503 44850 . + . ID=gene-A3216_07150;Name=A3216_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07150 GCA_001648835.1|LVXE01000019.1 GeneMarkS+ CDS 44503 44850 . + 0 ID=cds-OAX71242.1;Parent=gene-A3216_07150;Dbxref=NCBI_GP:OAX71242.1;Name=OAX71242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07150;product=hypothetical protein;protein_id=OAX71242.1;transl_table=11 ##sequence-region LVXE01000002.1 1 134558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000002.1 Genbank region 1 134558 . + . ID=LVXE01000002.1:1..134558;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000002.1 Genbank gene 1 3287 . + . ID=gene-A3216_01205;Name=A3216_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01205;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 1 3287 . + 2 ID=cds-OAX72098.1;Parent=gene-A3216_01205;Dbxref=NCBI_GP:OAX72098.1;Name=OAX72098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908855.1;locus_tag=A3216_01205;partial=true;product=polyketide synthase;protein_id=OAX72098.1;start_range=.,1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 3284 9889 . + . ID=gene-A3216_01210;Name=A3216_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01210 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 3284 9889 . + 0 ID=cds-OAX72099.1;Parent=gene-A3216_01210;Dbxref=NCBI_GP:OAX72099.1;Name=OAX72099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908854.1;locus_tag=A3216_01210;product=polyketide synthase;protein_id=OAX72099.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 9886 15354 . + . ID=gene-A3216_01215;Name=A3216_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01215 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 9886 15354 . + 0 ID=cds-OAX72100.1;Parent=gene-A3216_01215;Dbxref=NCBI_GP:OAX72100.1;Name=OAX72100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908853.1;locus_tag=A3216_01215;product=polyketide synthase;protein_id=OAX72100.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 15361 19830 . + . ID=gene-A3216_01220;Name=A3216_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01220 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 15361 19830 . + 0 ID=cds-OAX72101.1;Parent=gene-A3216_01220;Dbxref=NCBI_GP:OAX72101.1;Name=OAX72101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908852.1;locus_tag=A3216_01220;product=polyketide synthase;protein_id=OAX72101.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 19841 20836 . + . ID=gene-A3216_01225;Name=A3216_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01225 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 19841 20836 . + 0 ID=cds-OAX72178.1;Parent=gene-A3216_01225;Dbxref=NCBI_GP:OAX72178.1;Name=OAX72178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908851.1;locus_tag=A3216_01225;product=IclR family transcriptional regulator;protein_id=OAX72178.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 20833 21699 . + . ID=gene-A3216_01230;Name=A3216_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01230 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 20833 21699 . + 0 ID=cds-OAX72102.1;Parent=gene-A3216_01230;Dbxref=NCBI_GP:OAX72102.1;Name=OAX72102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908850.1;locus_tag=A3216_01230;product=antibiotic ABC transporter permease;protein_id=OAX72102.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 21696 22526 . + . ID=gene-A3216_01235;Name=A3216_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01235 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 21696 22526 . + 0 ID=cds-OAX72103.1;Parent=gene-A3216_01235;Dbxref=NCBI_GP:OAX72103.1;Name=OAX72103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908849.1;locus_tag=A3216_01235;product=peptide ABC transporter permease;protein_id=OAX72103.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 22575 23846 . + . ID=gene-A3216_01240;Name=A3216_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01240 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 22575 23846 . + 0 ID=cds-OAX72104.1;Parent=gene-A3216_01240;Dbxref=NCBI_GP:OAX72104.1;Name=OAX72104.1;Note=required for PDIM synthesis%3B phthiocerol and phthiodiolone dimycocerosate esters are scaffolds used for virulence-enhancing lipids%3B proposed to catalyze diesterification of phthiocerol and phthiodolone with mycocerosate%3B functions in polyketide synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49939.1;locus_tag=A3216_01240;product=acyltransferase;protein_id=OAX72104.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 23992 25257 . - . ID=gene-A3216_01245;Name=A3216_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01245 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 23992 25257 . - 0 ID=cds-OAX72105.1;Parent=gene-A3216_01245;Dbxref=NCBI_GP:OAX72105.1;Name=OAX72105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49929.1;locus_tag=A3216_01245;product=glycosyltransferase;protein_id=OAX72105.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 25448 26458 . - . ID=gene-A3216_01250;Name=A3216_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01250 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 25448 26458 . - 0 ID=cds-OAX72106.1;Parent=gene-A3216_01250;Dbxref=NCBI_GP:OAX72106.1;Name=OAX72106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908846.1;locus_tag=A3216_01250;product=hypothetical protein;protein_id=OAX72106.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 26757 27662 . + . ID=gene-A3216_01255;Name=A3216_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01255 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 26757 27662 . + 0 ID=cds-OAX72107.1;Parent=gene-A3216_01255;Dbxref=NCBI_GP:OAX72107.1;Name=OAX72107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908845.1;locus_tag=A3216_01255;product=hypothetical protein;protein_id=OAX72107.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 28024 28254 . - . ID=gene-A3216_01260;Name=A3216_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01260 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 28024 28254 . - 0 ID=cds-OAX72108.1;Parent=gene-A3216_01260;Dbxref=NCBI_GP:OAX72108.1;Name=OAX72108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01260;product=hypothetical protein;protein_id=OAX72108.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 30860 31117 . + . ID=gene-A3216_01265;Name=A3216_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01265 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 30860 31117 . + 0 ID=cds-OAX72109.1;Parent=gene-A3216_01265;Dbxref=NCBI_GP:OAX72109.1;Name=OAX72109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01265;product=hypothetical protein;protein_id=OAX72109.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 33062 35260 . + . ID=gene-A3216_01270;Name=A3216_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01270 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 33062 35260 . + 0 ID=cds-OAX72110.1;Parent=gene-A3216_01270;Dbxref=NCBI_GP:OAX72110.1;Name=OAX72110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908844.1;locus_tag=A3216_01270;product=hypothetical protein;protein_id=OAX72110.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 36147 36407 . - . ID=gene-A3216_01275;Name=A3216_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01275 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 36147 36407 . - 0 ID=cds-OAX72111.1;Parent=gene-A3216_01275;Dbxref=NCBI_GP:OAX72111.1;Name=OAX72111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01275;product=hypothetical protein;protein_id=OAX72111.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 36537 36731 . - . ID=gene-A3216_01280;Name=A3216_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01280 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 36537 36731 . - 0 ID=cds-OAX72112.1;Parent=gene-A3216_01280;Dbxref=NCBI_GP:OAX72112.1;Name=OAX72112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01280;product=hypothetical protein;protein_id=OAX72112.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 38039 38221 . - . ID=gene-A3216_01285;Name=A3216_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01285 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 38039 38221 . - 0 ID=cds-OAX72113.1;Parent=gene-A3216_01285;Dbxref=NCBI_GP:OAX72113.1;Name=OAX72113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01285;product=hypothetical protein;protein_id=OAX72113.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 39918 40550 . - . ID=gene-A3216_01290;Name=A3216_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01290;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 39918 40550 . - 0 ID=cds-A3216_01290;Parent=gene-A3216_01290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010948824.1;locus_tag=A3216_01290;product=cutinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 43397 43723 . + . ID=gene-A3216_01295;Name=A3216_01295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01295;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 43397 43723 . + 0 ID=cds-A3216_01295;Parent=gene-A3216_01295;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873375.1;locus_tag=A3216_01295;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 43783 44484 . + . ID=gene-A3216_01300;Name=A3216_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01300;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 43783 44484 . + 0 ID=cds-A3216_01300;Parent=gene-A3216_01300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772113.1;locus_tag=A3216_01300;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 44543 45295 . - . ID=gene-A3216_01305;Name=A3216_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01305 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 44543 45295 . - 0 ID=cds-OAX72114.1;Parent=gene-A3216_01305;Dbxref=NCBI_GP:OAX72114.1;Name=OAX72114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908843.1;locus_tag=A3216_01305;product=hypothetical protein;protein_id=OAX72114.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 45399 45484 . - . ID=gene-A3216_01310;Name=A3216_01310;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_01310 GCA_001648835.1|LVXE01000002.1 tRNAscan-SE tRNA 45399 45484 . - . ID=rna-A3216_01310;Parent=gene-A3216_01310;anticodon=(pos:complement(45448..45450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01310;product=tRNA-Ser GCA_001648835.1|LVXE01000002.1 tRNAscan-SE exon 45399 45484 . - . ID=exon-A3216_01310-1;Parent=rna-A3216_01310;anticodon=(pos:complement(45448..45450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01310;product=tRNA-Ser GCA_001648835.1|LVXE01000002.1 Genbank gene 45617 45713 . + . ID=gene-A3216_01315;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=A3216_01315 GCA_001648835.1|LVXE01000002.1 cmsearch SRP_RNA 45617 45713 . + . ID=rna-A3216_01315;Parent=gene-A3216_01315;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_01315;product=signal recognition particle sRNA small type GCA_001648835.1|LVXE01000002.1 cmsearch exon 45617 45713 . + . ID=exon-A3216_01315-1;Parent=rna-A3216_01315;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_01315;product=signal recognition particle sRNA small type GCA_001648835.1|LVXE01000002.1 Genbank gene 45802 47085 . + . ID=gene-A3216_01320;Name=A3216_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01320 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 45802 47085 . + 0 ID=cds-OAX72179.1;Parent=gene-A3216_01320;Dbxref=NCBI_GP:OAX72179.1;Name=OAX72179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772115.1;locus_tag=A3216_01320;product=aminotransferase;protein_id=OAX72179.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 47195 49030 . + . ID=gene-A3216_01325;Name=A3216_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01325 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 47195 49030 . + 0 ID=cds-OAX72115.1;Parent=gene-A3216_01325;Dbxref=NCBI_GP:OAX72115.1;Name=OAX72115.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908841.1;locus_tag=A3216_01325;product=DNA polymerase III subunit gamma/tau;protein_id=OAX72115.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 49027 50344 . - . ID=gene-A3216_01330;Name=A3216_01330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01330;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 49027 50344 . - 0 ID=cds-A3216_01330;Parent=gene-A3216_01330;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873371.1;locus_tag=A3216_01330;product=cyclopropane-fatty-acyl-phospholipid synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 50341 51720 . - . ID=gene-A3216_01335;Name=A3216_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01335 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 50341 51720 . - 0 ID=cds-OAX72116.1;Parent=gene-A3216_01335;Dbxref=NCBI_GP:OAX72116.1;Name=OAX72116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009952025.1;locus_tag=A3216_01335;product=FAD-linked oxidase;protein_id=OAX72116.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 51809 52246 . + . ID=gene-A3216_01340;Name=A3216_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01340 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 51809 52246 . + 0 ID=cds-OAX72117.1;Parent=gene-A3216_01340;Dbxref=NCBI_GP:OAX72117.1;Name=OAX72117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908838.1;locus_tag=A3216_01340;product=polyketide cyclase;protein_id=OAX72117.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 52262 52996 . - . ID=gene-A3216_01345;Name=A3216_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01345 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 52262 52996 . - 0 ID=cds-OAX72118.1;Parent=gene-A3216_01345;Dbxref=NCBI_GP:OAX72118.1;Name=OAX72118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020730957.1;locus_tag=A3216_01345;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OAX72118.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 53132 53482 . + . ID=gene-A3216_01350;Name=A3216_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01350 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 53132 53482 . + 0 ID=cds-OAX72119.1;Parent=gene-A3216_01350;Dbxref=NCBI_GP:OAX72119.1;Name=OAX72119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69519.1;locus_tag=A3216_01350;product=nucleoid-associated protein;protein_id=OAX72119.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 53494 54105 . + . ID=gene-A3216_01355;Name=A3216_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01355 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 53494 54105 . + 0 ID=cds-OAX72120.1;Parent=gene-A3216_01355;Dbxref=NCBI_GP:OAX72120.1;Name=OAX72120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015357550.1;locus_tag=A3216_01355;product=recombination protein RecR;protein_id=OAX72120.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 54185 55062 . + . ID=gene-A3216_01360;Name=A3216_01360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01360;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 54185 55062 . + 0 ID=cds-A3216_01360;Parent=gene-A3216_01360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003912325.1;locus_tag=A3216_01360;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 55059 55766 . - . ID=gene-A3216_01365;Name=A3216_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01365 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 55059 55766 . - 0 ID=cds-OAX72121.1;Parent=gene-A3216_01365;Dbxref=NCBI_GP:OAX72121.1;Name=OAX72121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873364.1;locus_tag=A3216_01365;product=glutamine amidotransferase;protein_id=OAX72121.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 55759 56994 . - . ID=gene-A3216_01370;Name=A3216_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01370 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 55759 56994 . - 0 ID=cds-OAX72122.1;Parent=gene-A3216_01370;Dbxref=NCBI_GP:OAX72122.1;Name=OAX72122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908833.1;locus_tag=A3216_01370;product=UDP-N-acetylmuramyl peptide synthase;protein_id=OAX72122.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 57095 58090 . + . ID=gene-A3216_01375;Name=A3216_01375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01375;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 57095 58090 . + 0 ID=cds-A3216_01375;Parent=gene-A3216_01375;Note=3'-5' exonuclease of DNA polymerase III%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003921568.1;locus_tag=A3216_01375;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 58271 60073 . - . ID=gene-A3216_01380;Name=A3216_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01380 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 58271 60073 . - 0 ID=cds-OAX72180.1;Parent=gene-A3216_01380;Dbxref=NCBI_GP:OAX72180.1;Name=OAX72180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873360.1;locus_tag=A3216_01380;product=2-isopropylmalate synthase;protein_id=OAX72180.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 60790 62055 . + . ID=gene-A3216_01385;Name=A3216_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01385 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 60790 62055 . + 0 ID=cds-OAX72123.1;Parent=gene-A3216_01385;Dbxref=NCBI_GP:OAX72123.1;Name=OAX72123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013472974.1;locus_tag=A3216_01385;product=aspartate kinase;protein_id=OAX72123.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 62055 63110 . + . ID=gene-A3216_01390;Name=A3216_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01390 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 62055 63110 . + 0 ID=cds-OAX72124.1;Parent=gene-A3216_01390;Dbxref=NCBI_GP:OAX72124.1;Name=OAX72124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908830.1;locus_tag=A3216_01390;product=aspartate-semialdehyde dehydrogenase;protein_id=OAX72124.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 63256 64266 . + . ID=gene-A3216_01395;Name=A3216_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01395 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 63256 64266 . + 0 ID=cds-OAX72181.1;Parent=gene-A3216_01395;Dbxref=NCBI_GP:OAX72181.1;Name=OAX72181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908829.1;locus_tag=A3216_01395;product=hypothetical protein;protein_id=OAX72181.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 65339 65632 . - . ID=gene-A3216_01400;Name=A3216_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01400 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 65339 65632 . - 0 ID=cds-OAX72125.1;Parent=gene-A3216_01400;Dbxref=NCBI_GP:OAX72125.1;Name=OAX72125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01400;product=hypothetical protein;protein_id=OAX72125.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 65987 66169 . + . ID=gene-A3216_01405;Name=A3216_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01405 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 65987 66169 . + 0 ID=cds-OAX72126.1;Parent=gene-A3216_01405;Dbxref=NCBI_GP:OAX72126.1;Name=OAX72126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01405;product=hypothetical protein;protein_id=OAX72126.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 66935 67582 . + . ID=gene-A3216_01410;Name=A3216_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01410 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 66935 67582 . + 0 ID=cds-OAX72182.1;Parent=gene-A3216_01410;Dbxref=NCBI_GP:OAX72182.1;Name=OAX72182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908828.1;locus_tag=A3216_01410;product=hypothetical protein;protein_id=OAX72182.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 67844 68140 . + . ID=gene-A3216_01415;Name=A3216_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01415 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 67844 68140 . + 0 ID=cds-OAX72127.1;Parent=gene-A3216_01415;Dbxref=NCBI_GP:OAX72127.1;Name=OAX72127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01415;product=hypothetical protein;protein_id=OAX72127.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 68386 68598 . + . ID=gene-A3216_01420;Name=A3216_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01420 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 68386 68598 . + 0 ID=cds-OAX72128.1;Parent=gene-A3216_01420;Dbxref=NCBI_GP:OAX72128.1;Name=OAX72128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01420;product=hypothetical protein;protein_id=OAX72128.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 68729 69037 . + . ID=gene-A3216_01425;Name=A3216_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01425 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 68729 69037 . + 0 ID=cds-OAX72129.1;Parent=gene-A3216_01425;Dbxref=NCBI_GP:OAX72129.1;Name=OAX72129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01425;product=hypothetical protein;protein_id=OAX72129.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 69241 69489 . + . ID=gene-A3216_01430;Name=A3216_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01430 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 69241 69489 . + 0 ID=cds-OAX72130.1;Parent=gene-A3216_01430;Dbxref=NCBI_GP:OAX72130.1;Name=OAX72130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01430;product=hypothetical protein;protein_id=OAX72130.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 70695 71063 . - . ID=gene-A3216_01435;Name=A3216_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01435 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 70695 71063 . - 0 ID=cds-OAX72131.1;Parent=gene-A3216_01435;Dbxref=NCBI_GP:OAX72131.1;Name=OAX72131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01435;product=hypothetical protein;protein_id=OAX72131.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 71395 72921 . + . ID=gene-A3216_01440;Name=A3216_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01440 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 71395 72921 . + 0 ID=cds-OAX72132.1;Parent=gene-A3216_01440;Dbxref=NCBI_GP:OAX72132.1;Name=OAX72132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB81.1;locus_tag=A3216_01440;product=glycerol kinase;protein_id=OAX72132.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 73187 73780 . - . ID=gene-A3216_01445;Name=A3216_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01445 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 73187 73780 . - 0 ID=cds-OAX72133.1;Parent=gene-A3216_01445;Dbxref=NCBI_GP:OAX72133.1;Name=OAX72133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908826.1;locus_tag=A3216_01445;product=PadR family transcriptional regulator;protein_id=OAX72133.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 74214 74804 . - . ID=gene-A3216_01450;Name=A3216_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01450 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 74214 74804 . - 0 ID=cds-OAX72134.1;Parent=gene-A3216_01450;Dbxref=NCBI_GP:OAX72134.1;Name=OAX72134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908825.1;locus_tag=A3216_01450;product=hypothetical protein;protein_id=OAX72134.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 75002 75202 . - . ID=gene-A3216_01455;Name=A3216_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01455 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 75002 75202 . - 0 ID=cds-OAX72135.1;Parent=gene-A3216_01455;Dbxref=NCBI_GP:OAX72135.1;Name=OAX72135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01455;product=hypothetical protein;protein_id=OAX72135.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 77855 77928 . - . ID=gene-A3216_01460;Name=A3216_01460;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_01460 GCA_001648835.1|LVXE01000002.1 tRNAscan-SE tRNA 77855 77928 . - . ID=rna-A3216_01460;Parent=gene-A3216_01460;anticodon=(pos:complement(77892..77894));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01460;product=tRNA-Pro GCA_001648835.1|LVXE01000002.1 tRNAscan-SE exon 77855 77928 . - . ID=exon-A3216_01460-1;Parent=rna-A3216_01460;anticodon=(pos:complement(77892..77894));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01460;product=tRNA-Pro GCA_001648835.1|LVXE01000002.1 Genbank gene 78946 79938 . - . ID=gene-A3216_01465;Name=A3216_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01465 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 78946 79938 . - 0 ID=cds-OAX72136.1;Parent=gene-A3216_01465;Dbxref=NCBI_GP:OAX72136.1;Name=OAX72136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908824.1;locus_tag=A3216_01465;product=metallophosphoesterase;protein_id=OAX72136.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 80127 82538 . - . ID=gene-A3216_01470;Name=A3216_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01470 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 80127 82538 . - 0 ID=cds-OAX72137.1;Parent=gene-A3216_01470;Dbxref=NCBI_GP:OAX72137.1;Name=OAX72137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873306.1;locus_tag=A3216_01470;product=penicillin-binding protein;protein_id=OAX72137.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 82912 83262 . + . ID=gene-A3216_01475;Name=A3216_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01475 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 82912 83262 . + 0 ID=cds-OAX72138.1;Parent=gene-A3216_01475;Dbxref=NCBI_GP:OAX72138.1;Name=OAX72138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HK79.1;locus_tag=A3216_01475;product=transcriptional regulator;protein_id=OAX72138.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 83367 84512 . - . ID=gene-A3216_01480;Name=A3216_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01480 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 83367 84512 . - 0 ID=cds-OAX72139.1;Parent=gene-A3216_01480;Dbxref=NCBI_GP:OAX72139.1;Name=OAX72139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908821.1;locus_tag=A3216_01480;product=anion transporter;protein_id=OAX72139.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 84509 85534 . - . ID=gene-A3216_01485;Name=A3216_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01485 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 84509 85534 . - 0 ID=cds-OAX72140.1;Parent=gene-A3216_01485;Dbxref=NCBI_GP:OAX72140.1;Name=OAX72140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941181.1;locus_tag=A3216_01485;product=ATPase;protein_id=OAX72140.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 85814 86269 . + . ID=gene-A3216_01490;Name=A3216_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01490 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 85814 86269 . + 0 ID=cds-OAX72141.1;Parent=gene-A3216_01490;Dbxref=NCBI_GP:OAX72141.1;Name=OAX72141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011741882.1;locus_tag=A3216_01490;product=LysR family transcriptional regulator;protein_id=OAX72141.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 86275 87063 . + . ID=gene-A3216_01495;Name=A3216_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01495 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 86275 87063 . + 0 ID=cds-OAX72142.1;Parent=gene-A3216_01495;Dbxref=NCBI_GP:OAX72142.1;Name=OAX72142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908818.1;locus_tag=A3216_01495;product=MBL fold metallo-hydrolase;protein_id=OAX72142.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 87141 87815 . - . ID=gene-A3216_01500;Name=A3216_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01500 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 87141 87815 . - 0 ID=cds-OAX72143.1;Parent=gene-A3216_01500;Dbxref=NCBI_GP:OAX72143.1;Name=OAX72143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873299.1;locus_tag=A3216_01500;product=Crp/Fnr family transcriptional regulator;protein_id=OAX72143.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 88241 89002 . + . ID=gene-A3216_01505;Name=A3216_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01505 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 88241 89002 . + 0 ID=cds-OAX72144.1;Parent=gene-A3216_01505;Dbxref=NCBI_GP:OAX72144.1;Name=OAX72144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908816.1;locus_tag=A3216_01505;product=endonuclease III;protein_id=OAX72144.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 89053 89700 . + . ID=gene-A3216_01510;Name=A3216_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01510 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 89053 89700 . + 0 ID=cds-OAX72145.1;Parent=gene-A3216_01510;Dbxref=NCBI_GP:OAX72145.1;Name=OAX72145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908815.1;locus_tag=A3216_01510;product=hypothetical protein;protein_id=OAX72145.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 89746 90546 . + . ID=gene-A3216_01515;Name=A3216_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01515 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 89746 90546 . + 0 ID=cds-OAX72146.1;Parent=gene-A3216_01515;Dbxref=NCBI_GP:OAX72146.1;Name=OAX72146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908814.1;locus_tag=A3216_01515;product=coenzyme A pyrophosphatase;protein_id=OAX72146.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 90543 91748 . + . ID=gene-A3216_01520;Name=A3216_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01520 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 90543 91748 . + 0 ID=cds-OAX72147.1;Parent=gene-A3216_01520;Dbxref=NCBI_GP:OAX72147.1;Name=OAX72147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908813.1;locus_tag=A3216_01520;product=serine protease;protein_id=OAX72147.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 91741 92715 . - . ID=gene-A3216_01525;Name=A3216_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01525 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 91741 92715 . - 0 ID=cds-OAX72148.1;Parent=gene-A3216_01525;Dbxref=NCBI_GP:OAX72148.1;Name=OAX72148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908812.1;locus_tag=A3216_01525;product=alpha/beta hydrolase;protein_id=OAX72148.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 92716 93261 . - . ID=gene-A3216_01530;Name=A3216_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01530 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 92716 93261 . - 0 ID=cds-OAX72149.1;Parent=gene-A3216_01530;Dbxref=NCBI_GP:OAX72149.1;Name=OAX72149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908811.1;locus_tag=A3216_01530;product=hypothetical protein;protein_id=OAX72149.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 93498 94169 . + . ID=gene-A3216_01535;Name=A3216_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01535 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 93498 94169 . + 0 ID=cds-OAX72150.1;Parent=gene-A3216_01535;Dbxref=NCBI_GP:OAX72150.1;Name=OAX72150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877062.1;locus_tag=A3216_01535;product=peptidase;protein_id=OAX72150.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 94666 94884 . + . ID=gene-A3216_01540;Name=A3216_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01540 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 94666 94884 . + 0 ID=cds-OAX72151.1;Parent=gene-A3216_01540;Dbxref=NCBI_GP:OAX72151.1;Name=OAX72151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01540;product=hypothetical protein;protein_id=OAX72151.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 95266 95481 . - . ID=gene-A3216_01545;Name=A3216_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01545 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 95266 95481 . - 0 ID=cds-OAX72152.1;Parent=gene-A3216_01545;Dbxref=NCBI_GP:OAX72152.1;Name=OAX72152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01545;product=hypothetical protein;protein_id=OAX72152.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 95531 95776 . + . ID=gene-A3216_01550;Name=A3216_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01550 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 95531 95776 . + 0 ID=cds-OAX72153.1;Parent=gene-A3216_01550;Dbxref=NCBI_GP:OAX72153.1;Name=OAX72153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01550;product=hypothetical protein;protein_id=OAX72153.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 96835 97104 . + . ID=gene-A3216_01555;Name=A3216_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01555 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 96835 97104 . + 0 ID=cds-OAX72154.1;Parent=gene-A3216_01555;Dbxref=NCBI_GP:OAX72154.1;Name=OAX72154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01555;product=hypothetical protein;protein_id=OAX72154.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 97175 97756 . + . ID=gene-A3216_01560;Name=A3216_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01560 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 97175 97756 . + 0 ID=cds-OAX72155.1;Parent=gene-A3216_01560;Dbxref=NCBI_GP:OAX72155.1;Name=OAX72155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01560;product=hypothetical protein;protein_id=OAX72155.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 98006 98858 . + . ID=gene-A3216_01565;Name=A3216_01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01565;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 98006 98858 . + 0 ID=cds-A3216_01565;Parent=gene-A3216_01565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166616.1;locus_tag=A3216_01565;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 98886 100472 . + . ID=gene-A3216_01570;Name=A3216_01570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01570;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 98886 100472 . + 0 ID=cds-A3216_01570;Parent=gene-A3216_01570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396668.1;locus_tag=A3216_01570;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 100547 101317 . + . ID=gene-A3216_01575;Name=A3216_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01575 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 100547 101317 . + 0 ID=cds-OAX72156.1;Parent=gene-A3216_01575;Dbxref=NCBI_GP:OAX72156.1;Name=OAX72156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772251.1;locus_tag=A3216_01575;product=oxidoreductase;protein_id=OAX72156.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 102065 102289 . + . ID=gene-A3216_01580;Name=A3216_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01580 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 102065 102289 . + 0 ID=cds-OAX72157.1;Parent=gene-A3216_01580;Dbxref=NCBI_GP:OAX72157.1;Name=OAX72157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908808.1;locus_tag=A3216_01580;product=hypothetical protein;protein_id=OAX72157.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 102460 103620 . + . ID=gene-A3216_01585;Name=A3216_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01585;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 102460 103620 . + 0 ID=cds-A3216_01585;Parent=gene-A3216_01585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003403010.1;locus_tag=A3216_01585;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 104792 105350 . + . ID=gene-A3216_01590;Name=A3216_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01590;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 104792 105350 . + 0 ID=cds-A3216_01590;Parent=gene-A3216_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019057042.1;locus_tag=A3216_01590;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 105928 106287 . - . ID=gene-A3216_01595;Name=A3216_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01595 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 105928 106287 . - 0 ID=cds-OAX72158.1;Parent=gene-A3216_01595;Dbxref=NCBI_GP:OAX72158.1;Name=OAX72158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908807.1;locus_tag=A3216_01595;product=hypothetical protein;protein_id=OAX72158.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 106679 106993 . - . ID=gene-A3216_01600;Name=A3216_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01600 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 106679 106993 . - 0 ID=cds-OAX72159.1;Parent=gene-A3216_01600;Dbxref=NCBI_GP:OAX72159.1;Name=OAX72159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908806.1;locus_tag=A3216_01600;product=hypothetical protein;protein_id=OAX72159.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 107257 107340 . - . ID=gene-A3216_01605;Name=A3216_01605;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_01605 GCA_001648835.1|LVXE01000002.1 tRNAscan-SE tRNA 107257 107340 . - . ID=rna-A3216_01605;Parent=gene-A3216_01605;anticodon=(pos:complement(107304..107306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01605;product=tRNA-Tyr GCA_001648835.1|LVXE01000002.1 tRNAscan-SE exon 107257 107340 . - . ID=exon-A3216_01605-1;Parent=rna-A3216_01605;anticodon=(pos:complement(107304..107306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_01605;product=tRNA-Tyr GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 107410 107897 . + . ID=gene-A3216_01610;Name=A3216_01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01610;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 107410 107897 . + 0 ID=cds-A3216_01610;Parent=gene-A3216_01610;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014585502.1;locus_tag=A3216_01610;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 107934 109172 . + . ID=gene-A3216_01615;Name=A3216_01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01615;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 107934 109172 . + 0 ID=cds-A3216_01615;Parent=gene-A3216_01615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015292262.1;locus_tag=A3216_01615;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 109189 109440 . - . ID=gene-A3216_01620;Name=A3216_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01620 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 109189 109440 . - 0 ID=cds-OAX72160.1;Parent=gene-A3216_01620;Dbxref=NCBI_GP:OAX72160.1;Name=OAX72160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01620;product=hypothetical protein;protein_id=OAX72160.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 110577 112067 . + . ID=gene-A3216_01625;Name=A3216_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01625 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 110577 112067 . + 0 ID=cds-OAX72161.1;Parent=gene-A3216_01625;Dbxref=NCBI_GP:OAX72161.1;Name=OAX72161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908805.1;locus_tag=A3216_01625;product=transporter;protein_id=OAX72161.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 112595 113458 . - . ID=gene-A3216_01630;Name=A3216_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01630 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 112595 113458 . - 0 ID=cds-OAX72162.1;Parent=gene-A3216_01630;Dbxref=NCBI_GP:OAX72162.1;Name=OAX72162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008261012.1;locus_tag=A3216_01630;product=zinc metalloprotease HtpX;protein_id=OAX72162.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 113569 114576 . - . ID=gene-A3216_01635;Name=A3216_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01635 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 113569 114576 . - 0 ID=cds-OAX72163.1;Parent=gene-A3216_01635;Dbxref=NCBI_GP:OAX72163.1;Name=OAX72163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003883613.1;locus_tag=A3216_01635;product=geranylgeranyl pyrophosphate synthase;protein_id=OAX72163.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 114592 115818 . + . ID=gene-A3216_01640;Name=A3216_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01640 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 114592 115818 . + 0 ID=cds-OAX72164.1;Parent=gene-A3216_01640;Dbxref=NCBI_GP:OAX72164.1;Name=OAX72164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908802.1;locus_tag=A3216_01640;product=FAD-linked oxidoreductase;protein_id=OAX72164.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 116370 116708 . + . ID=gene-A3216_01645;Name=A3216_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01645 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 116370 116708 . + 0 ID=cds-OAX72165.1;Parent=gene-A3216_01645;Dbxref=NCBI_GP:OAX72165.1;Name=OAX72165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908801.1;locus_tag=A3216_01645;product=hypothetical protein;protein_id=OAX72165.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 116726 117418 . - . ID=gene-A3216_01650;Name=A3216_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01650 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 116726 117418 . - 0 ID=cds-OAX72166.1;Parent=gene-A3216_01650;Dbxref=NCBI_GP:OAX72166.1;Name=OAX72166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167721.1;locus_tag=A3216_01650;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=OAX72166.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 117548 118541 . - . ID=gene-A3216_01655;Name=A3216_01655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01655;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 117548 118541 . - 0 ID=cds-A3216_01655;Parent=gene-A3216_01655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011854588.1;locus_tag=A3216_01655;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 118695 119222 . - . ID=gene-A3216_01660;Name=A3216_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01660 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 118695 119222 . - 0 ID=cds-OAX72167.1;Parent=gene-A3216_01660;Dbxref=NCBI_GP:OAX72167.1;Name=OAX72167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908799.1;locus_tag=A3216_01660;product=hypothetical protein;protein_id=OAX72167.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 119250 120920 . - . ID=gene-A3216_01665;Name=A3216_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01665 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 119250 120920 . - 0 ID=cds-OAX72168.1;Parent=gene-A3216_01665;Dbxref=NCBI_GP:OAX72168.1;Name=OAX72168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBB0.1;locus_tag=A3216_01665;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=OAX72168.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 121164 121961 . - . ID=gene-A3216_01670;Name=A3216_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01670 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 121164 121961 . - 0 ID=cds-OAX72183.1;Parent=gene-A3216_01670;Dbxref=NCBI_GP:OAX72183.1;Name=OAX72183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908797.1;locus_tag=A3216_01670;product=bromoperoxidase;protein_id=OAX72183.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 121924 122928 . - . ID=gene-A3216_01675;Name=A3216_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01675 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 121924 122928 . - 0 ID=cds-OAX72169.1;Parent=gene-A3216_01675;Dbxref=NCBI_GP:OAX72169.1;Name=OAX72169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBB2.1;locus_tag=A3216_01675;product=O-succinylbenzoate synthase;protein_id=OAX72169.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 122925 124554 . - . ID=gene-A3216_01680;Name=A3216_01680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01680;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 122925 124554 . - 0 ID=cds-A3216_01680;Parent=gene-A3216_01680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015632736.1;locus_tag=A3216_01680;product=amidohydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank pseudogene 124641 126156 . + . ID=gene-A3216_01685;Name=A3216_01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01685;pseudo=true GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 124641 126156 . + 0 ID=cds-A3216_01685;Parent=gene-A3216_01685;Note=activates fatty acids by binding to coenzyme A%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003919621.1;locus_tag=A3216_01685;product=acyl-CoA synthetase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 126442 126663 . + . ID=gene-A3216_01690;Name=A3216_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01690 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 126442 126663 . + 0 ID=cds-OAX72170.1;Parent=gene-A3216_01690;Dbxref=NCBI_GP:OAX72170.1;Name=OAX72170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908795.1;locus_tag=A3216_01690;product=hypothetical protein;protein_id=OAX72170.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 126656 127267 . + . ID=gene-A3216_01695;Name=A3216_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01695 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 126656 127267 . + 0 ID=cds-OAX72171.1;Parent=gene-A3216_01695;Dbxref=NCBI_GP:OAX72171.1;Name=OAX72171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908794.1;locus_tag=A3216_01695;product=hypothetical protein;protein_id=OAX72171.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 127264 128166 . + . ID=gene-A3216_01700;Name=A3216_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01700 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 127264 128166 . + 0 ID=cds-OAX72172.1;Parent=gene-A3216_01700;Dbxref=NCBI_GP:OAX72172.1;Name=OAX72172.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727493.1;locus_tag=A3216_01700;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=OAX72172.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 128322 128642 . + . ID=gene-A3216_01705;Name=A3216_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01705 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 128322 128642 . + 0 ID=cds-OAX72173.1;Parent=gene-A3216_01705;Dbxref=NCBI_GP:OAX72173.1;Name=OAX72173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01705;product=hypothetical protein;protein_id=OAX72173.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 129820 130236 . + . ID=gene-A3216_01710;Name=A3216_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01710 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 129820 130236 . + 0 ID=cds-OAX72184.1;Parent=gene-A3216_01710;Dbxref=NCBI_GP:OAX72184.1;Name=OAX72184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908792.1;locus_tag=A3216_01710;product=glyoxalase;protein_id=OAX72184.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 130334 131578 . + . ID=gene-A3216_01715;Name=A3216_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01715 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 130334 131578 . + 0 ID=cds-OAX72174.1;Parent=gene-A3216_01715;Dbxref=NCBI_GP:OAX72174.1;Name=OAX72174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50173.1;locus_tag=A3216_01715;product=inorganic phosphate transporter;protein_id=OAX72174.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 131575 131865 . + . ID=gene-A3216_01720;Name=A3216_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01720 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 131575 131865 . + 0 ID=cds-OAX72175.1;Parent=gene-A3216_01720;Dbxref=NCBI_GP:OAX72175.1;Name=OAX72175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908790.1;locus_tag=A3216_01720;product=hypothetical protein;protein_id=OAX72175.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 131895 132197 . + . ID=gene-A3216_01725;Name=A3216_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01725 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 131895 132197 . + 0 ID=cds-OAX72176.1;Parent=gene-A3216_01725;Dbxref=NCBI_GP:OAX72176.1;Name=OAX72176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908789.1;locus_tag=A3216_01725;product=hypothetical protein;protein_id=OAX72176.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 132290 133348 . + . ID=gene-A3216_01730;Name=A3216_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01730 GCA_001648835.1|LVXE01000002.1 Protein Homology CDS 132290 133348 . + 0 ID=cds-OAX72185.1;Parent=gene-A3216_01730;Dbxref=NCBI_GP:OAX72185.1;Name=OAX72185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015626726.1;locus_tag=A3216_01730;product=O-succinylbenzoic acid--CoA ligase;protein_id=OAX72185.1;transl_table=11 GCA_001648835.1|LVXE01000002.1 Genbank gene 133665 133868 . - . ID=gene-A3216_01735;Name=A3216_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01735 GCA_001648835.1|LVXE01000002.1 GeneMarkS+ CDS 133665 133868 . - 0 ID=cds-OAX72177.1;Parent=gene-A3216_01735;Dbxref=NCBI_GP:OAX72177.1;Name=OAX72177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01735;product=hypothetical protein;protein_id=OAX72177.1;transl_table=11 ##sequence-region LVXE01000020.1 1 42599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000020.1 Genbank region 1 42599 . + . ID=LVXE01000020.1:1..42599;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 1 213 . + . ID=gene-A3216_07155;Name=A3216_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07155;pseudo=true GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 1 213 . + 0 ID=cds-A3216_07155;Parent=gene-A3216_07155;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07155;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 421 633 . - . ID=gene-A3216_07160;Name=A3216_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07160 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 421 633 . - 0 ID=cds-OAX71183.1;Parent=gene-A3216_07160;Dbxref=NCBI_GP:OAX71183.1;Name=OAX71183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07160;product=hypothetical protein;protein_id=OAX71183.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 638 970 . - . ID=gene-A3216_07165;Name=A3216_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07165 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 638 970 . - 0 ID=cds-OAX71184.1;Parent=gene-A3216_07165;Dbxref=NCBI_GP:OAX71184.1;Name=OAX71184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07165;product=hypothetical protein;protein_id=OAX71184.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 1438 1902 . - . ID=gene-A3216_07170;Name=A3216_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07170 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 1438 1902 . - 0 ID=cds-OAX71185.1;Parent=gene-A3216_07170;Dbxref=NCBI_GP:OAX71185.1;Name=OAX71185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908535.1;locus_tag=A3216_07170;product=hypothetical protein;protein_id=OAX71185.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 2206 2586 . + . ID=gene-A3216_07175;Name=A3216_07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07175;pseudo=true GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 2206 2586 . + 0 ID=cds-A3216_07175;Parent=gene-A3216_07175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P64970.1;locus_tag=A3216_07175;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 2583 2768 . + . ID=gene-A3216_07180;Name=A3216_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07180 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 2583 2768 . + 0 ID=cds-OAX71186.1;Parent=gene-A3216_07180;Dbxref=NCBI_GP:OAX71186.1;Name=OAX71186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07180;product=hypothetical protein;protein_id=OAX71186.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 3022 3225 . - . ID=gene-A3216_07185;Name=A3216_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07185 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 3022 3225 . - 0 ID=cds-OAX71187.1;Parent=gene-A3216_07185;Dbxref=NCBI_GP:OAX71187.1;Name=OAX71187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07185;product=hypothetical protein;protein_id=OAX71187.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 3703 4146 . - . ID=gene-A3216_07190;Name=A3216_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07190 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 3703 4146 . - 0 ID=cds-OAX71188.1;Parent=gene-A3216_07190;Dbxref=NCBI_GP:OAX71188.1;Name=OAX71188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908536.1;locus_tag=A3216_07190;product=RNA-binding protein;protein_id=OAX71188.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 4489 4674 . - . ID=gene-A3216_07195;Name=A3216_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07195 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 4489 4674 . - 0 ID=cds-OAX71189.1;Parent=gene-A3216_07195;Dbxref=NCBI_GP:OAX71189.1;Name=OAX71189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07195;product=hypothetical protein;protein_id=OAX71189.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 4794 6422 . + . ID=gene-A3216_07200;Name=A3216_07200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07200;pseudo=true GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 4794 6422 . + 0 ID=cds-A3216_07200;Parent=gene-A3216_07200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395077.1;locus_tag=A3216_07200;product=Na+/H+ antiporter;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 7096 7401 . + . ID=gene-A3216_07205;Name=A3216_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07205 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 7096 7401 . + 0 ID=cds-OAX71190.1;Parent=gene-A3216_07205;Dbxref=NCBI_GP:OAX71190.1;Name=OAX71190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908537.1;locus_tag=A3216_07205;product=hypothetical protein;protein_id=OAX71190.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 7435 7659 . + . ID=gene-A3216_07210;Name=A3216_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07210 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 7435 7659 . + 0 ID=cds-OAX71191.1;Parent=gene-A3216_07210;Dbxref=NCBI_GP:OAX71191.1;Name=OAX71191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07210;product=hypothetical protein;protein_id=OAX71191.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 7733 7924 . + . ID=gene-A3216_07215;Name=A3216_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07215 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 7733 7924 . + 0 ID=cds-OAX71192.1;Parent=gene-A3216_07215;Dbxref=NCBI_GP:OAX71192.1;Name=OAX71192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07215;product=hypothetical protein;protein_id=OAX71192.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 8559 8813 . - . ID=gene-A3216_07220;Name=A3216_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07220 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 8559 8813 . - 0 ID=cds-OAX71193.1;Parent=gene-A3216_07220;Dbxref=NCBI_GP:OAX71193.1;Name=OAX71193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07220;product=hypothetical protein;protein_id=OAX71193.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 9595 10803 . + . ID=gene-A3216_07225;Name=A3216_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07225 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 9595 10803 . + 0 ID=cds-OAX71194.1;Parent=gene-A3216_07225;Dbxref=NCBI_GP:OAX71194.1;Name=OAX71194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBM9.1;locus_tag=A3216_07225;product=cystathionine beta-lyase;protein_id=OAX71194.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 11928 12231 . - . ID=gene-A3216_07230;Name=A3216_07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07230;pseudo=true GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 11928 12231 . - 0 ID=cds-A3216_07230;Parent=gene-A3216_07230;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014214513.1;locus_tag=A3216_07230;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 12380 12826 . + . ID=gene-A3216_07235;Name=A3216_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07235 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 12380 12826 . + 0 ID=cds-OAX71195.1;Parent=gene-A3216_07235;Dbxref=NCBI_GP:OAX71195.1;Name=OAX71195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712205.1;locus_tag=A3216_07235;product=hypothetical protein;protein_id=OAX71195.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 13385 13798 . + . ID=gene-A3216_07240;Name=A3216_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07240 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 13385 13798 . + 0 ID=cds-OAX71196.1;Parent=gene-A3216_07240;Dbxref=NCBI_GP:OAX71196.1;Name=OAX71196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P13733.1;locus_tag=A3216_07240;product=hypothetical protein;protein_id=OAX71196.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 14548 14754 . - . ID=gene-A3216_07245;Name=A3216_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07245 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 14548 14754 . - 0 ID=cds-OAX71197.1;Parent=gene-A3216_07245;Dbxref=NCBI_GP:OAX71197.1;Name=OAX71197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07245;product=hypothetical protein;protein_id=OAX71197.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 15002 15985 . - . ID=gene-A3216_07250;Name=A3216_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07250 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 15002 15985 . - 0 ID=cds-OAX71198.1;Parent=gene-A3216_07250;Dbxref=NCBI_GP:OAX71198.1;Name=OAX71198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908541.1;locus_tag=A3216_07250;product=ATPase/protein kinase;protein_id=OAX71198.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 15986 18262 . - . ID=gene-A3216_07255;Name=A3216_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07255 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 15986 18262 . - 0 ID=cds-OAX71199.1;Parent=gene-A3216_07255;Dbxref=NCBI_GP:OAX71199.1;Name=OAX71199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908542.1;locus_tag=A3216_07255;product=methylmalonyl-CoA mutase;protein_id=OAX71199.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 18268 20178 . - . ID=gene-A3216_07260;Name=A3216_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07260 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 18268 20178 . - 0 ID=cds-OAX71200.1;Parent=gene-A3216_07260;Dbxref=NCBI_GP:OAX71200.1;Name=OAX71200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877673.1;locus_tag=A3216_07260;product=methylmalonyl-CoA mutase small subunit;protein_id=OAX71200.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 21278 22402 . - . ID=gene-A3216_07265;Name=A3216_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07265 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 21278 22402 . - 0 ID=cds-OAX71201.1;Parent=gene-A3216_07265;Dbxref=NCBI_GP:OAX71201.1;Name=OAX71201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908544.1;locus_tag=A3216_07265;product=hypothetical protein;protein_id=OAX71201.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 22439 22870 . - . ID=gene-A3216_07270;Name=A3216_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07270 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 22439 22870 . - 0 ID=cds-OAX71202.1;Parent=gene-A3216_07270;Dbxref=NCBI_GP:OAX71202.1;Name=OAX71202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908545.1;locus_tag=A3216_07270;product=hypothetical protein;protein_id=OAX71202.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 22928 23824 . + . ID=gene-A3216_07275;Name=A3216_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07275 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 22928 23824 . + 0 ID=cds-OAX71203.1;Parent=gene-A3216_07275;Dbxref=NCBI_GP:OAX71203.1;Name=OAX71203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBM3.1;locus_tag=A3216_07275;product=hypothetical protein;protein_id=OAX71203.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 23861 24871 . - . ID=gene-A3216_07280;Name=A3216_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07280 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 23861 24871 . - 0 ID=cds-OAX71204.1;Parent=gene-A3216_07280;Dbxref=NCBI_GP:OAX71204.1;Name=OAX71204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBM2.1;locus_tag=A3216_07280;product=ferrochelatase;protein_id=OAX71204.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 24878 25687 . - . ID=gene-A3216_07285;Name=A3216_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07285 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 24878 25687 . - 0 ID=cds-OAX71205.1;Parent=gene-A3216_07285;Dbxref=NCBI_GP:OAX71205.1;Name=OAX71205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908548.1;locus_tag=A3216_07285;product=enoyl-[acyl-carrier-protein] reductase;protein_id=OAX71205.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 25717 26478 . - . ID=gene-A3216_07290;Name=A3216_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07290 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 25717 26478 . - 0 ID=cds-OAX71206.1;Parent=gene-A3216_07290;Dbxref=NCBI_GP:OAX71206.1;Name=OAX71206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739633.1;locus_tag=A3216_07290;product=beta-ketoacyl-ACP reductase;protein_id=OAX71206.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 26551 27558 . - . ID=gene-A3216_07295;Name=A3216_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07295 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 26551 27558 . - 0 ID=cds-OAX71207.1;Parent=gene-A3216_07295;Dbxref=NCBI_GP:OAX71207.1;Name=OAX71207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015356078.1;locus_tag=A3216_07295;product=hypothetical protein;protein_id=OAX71207.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 27602 28513 . - . ID=gene-A3216_07300;Name=A3216_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07300 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 27602 28513 . - 0 ID=cds-OAX71217.1;Parent=gene-A3216_07300;Dbxref=NCBI_GP:OAX71217.1;Name=OAX71217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171843.1;locus_tag=A3216_07300;product=hypothetical protein;protein_id=OAX71217.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 28561 29694 . - . ID=gene-A3216_07305;Name=A3216_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07305 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 28561 29694 . - 0 ID=cds-OAX71208.1;Parent=gene-A3216_07305;Dbxref=NCBI_GP:OAX71208.1;Name=OAX71208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171844.1;locus_tag=A3216_07305;product=ATPase;protein_id=OAX71208.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 29929 30654 . - . ID=gene-A3216_07310;Name=A3216_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07310 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 29929 30654 . - 0 ID=cds-OAX71209.1;Parent=gene-A3216_07310;Dbxref=NCBI_GP:OAX71209.1;Name=OAX71209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908553.1;locus_tag=A3216_07310;product=peptidase C40;protein_id=OAX71209.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 30681 32120 . - . ID=gene-A3216_07315;Name=A3216_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07315 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 30681 32120 . - 0 ID=cds-OAX71210.1;Parent=gene-A3216_07315;Dbxref=NCBI_GP:OAX71210.1;Name=OAX71210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908554.1;locus_tag=A3216_07315;product=peptidase M23;protein_id=OAX71210.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 32360 32932 . - . ID=gene-A3216_07320;Name=A3216_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07320 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 32360 32932 . - 0 ID=cds-OAX71211.1;Parent=gene-A3216_07320;Dbxref=NCBI_GP:OAX71211.1;Name=OAX71211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908555.1;locus_tag=A3216_07320;product=hypothetical protein;protein_id=OAX71211.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 33215 36049 . + . ID=gene-A3216_07325;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=A3216_07325 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 33215 36049 . + 0 ID=cds-OAX71212.1;Parent=gene-A3216_07325;Dbxref=NCBI_GP:OAX71212.1;Name=OAX71212.1;Note=catalyzes the conversion of citrate to isocitrate;gbkey=CDS;gene=acnA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908556.1;locus_tag=A3216_07325;product=aconitate hydratase;protein_id=OAX71212.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 36049 36626 . + . ID=gene-A3216_07330;Name=A3216_07330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07330;pseudo=true GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 36049 36626 . + 0 ID=cds-A3216_07330;Parent=gene-A3216_07330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011894523.1;locus_tag=A3216_07330;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 37038 38675 . - . ID=gene-A3216_07335;Name=A3216_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07335 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 37038 38675 . - 0 ID=cds-OAX71213.1;Parent=gene-A3216_07335;Dbxref=NCBI_GP:OAX71213.1;Name=OAX71213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010841029.1;locus_tag=A3216_07335;product=ABC transporter;protein_id=OAX71213.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank pseudogene 38715 39527 . - . ID=gene-A3216_07340;Name=A3216_07340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07340;pseudo=true GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 38715 39527 . - 0 ID=cds-A3216_07340;Parent=gene-A3216_07340;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003911554.1;locus_tag=A3216_07340;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 39604 39996 . - . ID=gene-A3216_07345;Name=A3216_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07345 GCA_001648835.1|LVXE01000020.1 Protein Homology CDS 39604 39996 . - 0 ID=cds-OAX71214.1;Parent=gene-A3216_07345;Dbxref=NCBI_GP:OAX71214.1;Name=OAX71214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908558.1;locus_tag=A3216_07345;product=thiol reductase thioredoxin;protein_id=OAX71214.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 40017 40241 . + . ID=gene-A3216_07350;Name=A3216_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07350 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 40017 40241 . + 0 ID=cds-OAX71215.1;Parent=gene-A3216_07350;Dbxref=NCBI_GP:OAX71215.1;Name=OAX71215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07350;product=hypothetical protein;protein_id=OAX71215.1;transl_table=11 GCA_001648835.1|LVXE01000020.1 Genbank gene 41868 42215 . + . ID=gene-A3216_07355;Name=A3216_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07355 GCA_001648835.1|LVXE01000020.1 GeneMarkS+ CDS 41868 42215 . + 0 ID=cds-OAX71216.1;Parent=gene-A3216_07355;Dbxref=NCBI_GP:OAX71216.1;Name=OAX71216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07355;product=hypothetical protein;protein_id=OAX71216.1;transl_table=11 ##sequence-region LVXE01000021.1 1 41761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000021.1 Genbank region 1 41761 . + . ID=LVXE01000021.1:1..41761;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 1 523 . - . ID=gene-A3216_07360;Name=A3216_07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07360;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 1 523 . - 0 ID=cds-A3216_07360;Parent=gene-A3216_07360;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907760.1;locus_tag=A3216_07360;product=AAA family ATPase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 712 1754 . - . ID=gene-A3216_07365;Name=A3216_07365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07365;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 712 1754 . - 0 ID=cds-A3216_07365;Parent=gene-A3216_07365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011559721.1;locus_tag=A3216_07365;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 1747 2688 . - . ID=gene-A3216_07370;Name=A3216_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07370 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 1747 2688 . - 0 ID=cds-OAX71180.1;Parent=gene-A3216_07370;Dbxref=NCBI_GP:OAX71180.1;Name=OAX71180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907759.1;locus_tag=A3216_07370;product=hypothetical protein;protein_id=OAX71180.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 3507 3944 . - . ID=gene-A3216_07375;Name=A3216_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07375 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 3507 3944 . - 0 ID=cds-OAX71158.1;Parent=gene-A3216_07375;Dbxref=NCBI_GP:OAX71158.1;Name=OAX71158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07375;product=hypothetical protein;protein_id=OAX71158.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 4143 4754 . - . ID=gene-A3216_07380;Name=A3216_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07380 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 4143 4754 . - 0 ID=cds-OAX71159.1;Parent=gene-A3216_07380;Dbxref=NCBI_GP:OAX71159.1;Name=OAX71159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07380;product=hypothetical protein;protein_id=OAX71159.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 5122 5349 . - . ID=gene-A3216_07385;Name=A3216_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07385 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 5122 5349 . - 0 ID=cds-OAX71160.1;Parent=gene-A3216_07385;Dbxref=NCBI_GP:OAX71160.1;Name=OAX71160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07385;product=hypothetical protein;protein_id=OAX71160.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 6686 6955 . + . ID=gene-A3216_07390;Name=A3216_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07390 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 6686 6955 . + 0 ID=cds-OAX71161.1;Parent=gene-A3216_07390;Dbxref=NCBI_GP:OAX71161.1;Name=OAX71161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07390;product=hypothetical protein;protein_id=OAX71161.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 7042 7248 . + . ID=gene-A3216_07395;Name=A3216_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07395 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 7042 7248 . + 0 ID=cds-OAX71162.1;Parent=gene-A3216_07395;Dbxref=NCBI_GP:OAX71162.1;Name=OAX71162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07395;product=hypothetical protein;protein_id=OAX71162.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 7872 8069 . + . ID=gene-A3216_07400;Name=A3216_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07400 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 7872 8069 . + 0 ID=cds-OAX71163.1;Parent=gene-A3216_07400;Dbxref=NCBI_GP:OAX71163.1;Name=OAX71163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07400;product=hypothetical protein;protein_id=OAX71163.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 8884 9111 . + . ID=gene-A3216_07405;Name=A3216_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07405 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 8884 9111 . + 0 ID=cds-OAX71164.1;Parent=gene-A3216_07405;Dbxref=NCBI_GP:OAX71164.1;Name=OAX71164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07405;product=hypothetical protein;protein_id=OAX71164.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 11581 13350 . - . ID=gene-A3216_07410;Name=A3216_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07410 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 11581 13350 . - 0 ID=cds-OAX71181.1;Parent=gene-A3216_07410;Dbxref=NCBI_GP:OAX71181.1;Name=OAX71181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942494.1;locus_tag=A3216_07410;product=aspartate--tRNA ligase;protein_id=OAX71181.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 13514 14084 . + . ID=gene-A3216_07415;Name=A3216_07415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07415;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 13514 14084 . + 0 ID=cds-A3216_07415;Parent=gene-A3216_07415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019306166.1;locus_tag=A3216_07415;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 14174 14996 . + . ID=gene-A3216_07420;Name=A3216_07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07420;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 14174 14996 . + 0 ID=cds-A3216_07420;Parent=gene-A3216_07420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019736770.1;locus_tag=A3216_07420;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 16201 16383 . - . ID=gene-A3216_07425;Name=A3216_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07425 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 16201 16383 . - 0 ID=cds-OAX71165.1;Parent=gene-A3216_07425;Dbxref=NCBI_GP:OAX71165.1;Name=OAX71165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07425;product=hypothetical protein;protein_id=OAX71165.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 18266 18457 . - . ID=gene-A3216_07430;Name=A3216_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07430 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 18266 18457 . - 0 ID=cds-OAX71166.1;Parent=gene-A3216_07430;Dbxref=NCBI_GP:OAX71166.1;Name=OAX71166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07430;product=hypothetical protein;protein_id=OAX71166.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 18583 18810 . - . ID=gene-A3216_07435;Name=A3216_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07435 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 18583 18810 . - 0 ID=cds-OAX71167.1;Parent=gene-A3216_07435;Dbxref=NCBI_GP:OAX71167.1;Name=OAX71167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07435;product=hypothetical protein;protein_id=OAX71167.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 19166 20449 . - . ID=gene-A3216_07440;Name=A3216_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07440 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 19166 20449 . - 0 ID=cds-OAX71168.1;Parent=gene-A3216_07440;Dbxref=NCBI_GP:OAX71168.1;Name=OAX71168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46696.2;locus_tag=A3216_07440;product=histidine--tRNA ligase;protein_id=OAX71168.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 20453 21109 . - . ID=gene-A3216_07445;Name=A3216_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07445 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 20453 21109 . - 0 ID=cds-OAX71169.1;Parent=gene-A3216_07445;Dbxref=NCBI_GP:OAX71169.1;Name=OAX71169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907756.1;locus_tag=A3216_07445;product=hypothetical protein;protein_id=OAX71169.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 21273 22160 . + . ID=gene-A3216_07450;Name=A3216_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07450 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 21273 22160 . + 0 ID=cds-OAX71170.1;Parent=gene-A3216_07450;Dbxref=NCBI_GP:OAX71170.1;Name=OAX71170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46697.1;locus_tag=A3216_07450;product=peptidylprolyl isomerase;protein_id=OAX71170.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 22219 24582 . - . ID=gene-A3216_07455;Name=A3216_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07455 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 22219 24582 . - 0 ID=cds-OAX71182.1;Parent=gene-A3216_07455;Dbxref=NCBI_GP:OAX71182.1;Name=OAX71182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954371.1;locus_tag=A3216_07455;product=GTP pyrophosphokinase;protein_id=OAX71182.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 24679 25198 . - . ID=gene-A3216_07460;Name=A3216_07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07460;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 24679 25198 . - 0 ID=cds-A3216_07460;Parent=gene-A3216_07460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009936220.1;locus_tag=A3216_07460;product=adenine phosphoribosyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 25228 26899 . - . ID=gene-A3216_07465;Name=A3216_07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07465;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 25228 26899 . - 0 ID=cds-A3216_07465;Parent=gene-A3216_07465;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49646.2;locus_tag=A3216_07465;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 26944 28359 . - . ID=gene-A3216_07470;Name=A3216_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07470 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 26944 28359 . - 0 ID=cds-OAX71171.1;Parent=gene-A3216_07470;Dbxref=NCBI_GP:OAX71171.1;Name=OAX71171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P38386.2;locus_tag=A3216_07470;product=protein-export membrane protein SecF;protein_id=OAX71171.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 28364 30079 . - . ID=gene-A3216_07475;Name=A3216_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07475 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 28364 30079 . - 0 ID=cds-OAX71172.1;Parent=gene-A3216_07475;Dbxref=NCBI_GP:OAX71172.1;Name=OAX71172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355868.1;locus_tag=A3216_07475;product=protein-export membrane protein SecD;protein_id=OAX71172.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 30197 30541 . - . ID=gene-A3216_07480;Name=A3216_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07480 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 30197 30541 . - 0 ID=cds-OAX71173.1;Parent=gene-A3216_07480;Dbxref=NCBI_GP:OAX71173.1;Name=OAX71173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49647.2;locus_tag=A3216_07480;product=preprotein translocase subunit YajC;protein_id=OAX71173.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 30810 32150 . + . ID=gene-A3216_07485;Name=A3216_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07485 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 30810 32150 . + 0 ID=cds-OAX71174.1;Parent=gene-A3216_07485;Dbxref=NCBI_GP:OAX71174.1;Name=OAX71174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P40829.1;locus_tag=A3216_07485;product=4-aminobutyrate transaminase;protein_id=OAX71174.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 32288 35812 . + . ID=gene-A3216_07490;Name=A3216_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07490 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 32288 35812 . + 0 ID=cds-OAX71175.1;Parent=gene-A3216_07490;Dbxref=NCBI_GP:OAX71175.1;Name=OAX71175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019305838.1;locus_tag=A3216_07490;product=oxidoreductase;protein_id=OAX71175.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 36749 37798 . - . ID=gene-A3216_07495;Name=A3216_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07495 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 36749 37798 . - 0 ID=cds-OAX71176.1;Parent=gene-A3216_07495;Dbxref=NCBI_GP:OAX71176.1;Name=OAX71176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P40833.2;locus_tag=A3216_07495;product=Holliday junction DNA helicase RuvB;protein_id=OAX71176.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 37795 38406 . - . ID=gene-A3216_07500;Name=A3216_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07500 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 37795 38406 . - 0 ID=cds-OAX71177.1;Parent=gene-A3216_07500;Dbxref=NCBI_GP:OAX71177.1;Name=OAX71177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P40832.1;locus_tag=A3216_07500;product=Holliday junction DNA helicase RuvA;protein_id=OAX71177.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 38403 38969 . - . ID=gene-A3216_07505;Name=A3216_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07505 GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 38403 38969 . - 0 ID=cds-OAX71178.1;Parent=gene-A3216_07505;Dbxref=NCBI_GP:OAX71178.1;Name=OAX71178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013829310.1;locus_tag=A3216_07505;product=crossover junction endodeoxyribonuclease RuvC;protein_id=OAX71178.1;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank pseudogene 40569 40993 . + . ID=gene-A3216_07510;Name=A3216_07510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07510;pseudo=true GCA_001648835.1|LVXE01000021.1 Protein Homology CDS 40569 40993 . + 0 ID=cds-A3216_07510;Parent=gene-A3216_07510;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385310.1;locus_tag=A3216_07510;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000021.1 Genbank gene 40990 41322 . + . ID=gene-A3216_07515;Name=A3216_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07515 GCA_001648835.1|LVXE01000021.1 GeneMarkS+ CDS 40990 41322 . + 0 ID=cds-OAX71179.1;Parent=gene-A3216_07515;Dbxref=NCBI_GP:OAX71179.1;Name=OAX71179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07515;product=hypothetical protein;protein_id=OAX71179.1;transl_table=11 ##sequence-region LVXE01000022.1 1 39943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000022.1 Genbank region 1 39943 . + . ID=LVXE01000022.1:1..39943;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000022.1 Genbank gene 1 3763 . + . ID=gene-A3216_07520;Name=A3216_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07520;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 1 3763 . + 1 ID=cds-OAX71135.1;Parent=gene-A3216_07520;Dbxref=NCBI_GP:OAX71135.1;Name=OAX71135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907524.1;locus_tag=A3216_07520;partial=true;product=polyketide synthase;protein_id=OAX71135.1;start_range=.,1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 3760 5313 . + . ID=gene-A3216_07525;Name=A3216_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07525 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 3760 5313 . + 0 ID=cds-OAX71136.1;Parent=gene-A3216_07525;Dbxref=NCBI_GP:OAX71136.1;Name=OAX71136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907525.1;locus_tag=A3216_07525;product=methylmalonyl-CoA carboxyltransferase;protein_id=OAX71136.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 5777 6016 . - . ID=gene-A3216_07530;Name=A3216_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07530 GCA_001648835.1|LVXE01000022.1 GeneMarkS+ CDS 5777 6016 . - 0 ID=cds-OAX71137.1;Parent=gene-A3216_07530;Dbxref=NCBI_GP:OAX71137.1;Name=OAX71137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07530;product=hypothetical protein;protein_id=OAX71137.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 6208 6627 . - . ID=gene-A3216_07535;Name=A3216_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07535 GCA_001648835.1|LVXE01000022.1 GeneMarkS+ CDS 6208 6627 . - 0 ID=cds-OAX71138.1;Parent=gene-A3216_07535;Dbxref=NCBI_GP:OAX71138.1;Name=OAX71138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07535;product=hypothetical protein;protein_id=OAX71138.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 8464 11715 . - . ID=gene-A3216_07540;Name=A3216_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07540 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 8464 11715 . - 0 ID=cds-OAX71139.1;Parent=gene-A3216_07540;Dbxref=NCBI_GP:OAX71139.1;Name=OAX71139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDA9.1;locus_tag=A3216_07540;product=arabinosyltransferase;protein_id=OAX71139.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 11712 15047 . - . ID=gene-A3216_07545;Name=A3216_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07545 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 11712 15047 . - 0 ID=cds-OAX71140.1;Parent=gene-A3216_07545;Dbxref=NCBI_GP:OAX71140.1;Name=OAX71140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P71485.1;locus_tag=A3216_07545;product=arabinosyltransferase;protein_id=OAX71140.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 15504 15695 . + . ID=gene-A3216_07550;Name=A3216_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07550 GCA_001648835.1|LVXE01000022.1 GeneMarkS+ CDS 15504 15695 . + 0 ID=cds-OAX71141.1;Parent=gene-A3216_07550;Dbxref=NCBI_GP:OAX71141.1;Name=OAX71141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07550;product=hypothetical protein;protein_id=OAX71141.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 16006 19218 . - . ID=gene-A3216_07555;Name=A3216_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07555 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 16006 19218 . - 0 ID=cds-OAX71142.1;Parent=gene-A3216_07555;Dbxref=NCBI_GP:OAX71142.1;Name=OAX71142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDA7.1;locus_tag=A3216_07555;product=arabinosyltransferase;protein_id=OAX71142.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 19351 21249 . - . ID=gene-A3216_07560;Name=A3216_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07560 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 19351 21249 . - 0 ID=cds-OAX71143.1;Parent=gene-A3216_07560;Dbxref=NCBI_GP:OAX71143.1;Name=OAX71143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CDA6.1;locus_tag=A3216_07560;product=arabinofuranosyltransferase;protein_id=OAX71143.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 21252 22016 . - . ID=gene-A3216_07565;Name=A3216_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07565 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 21252 22016 . - 0 ID=cds-OAX71144.1;Parent=gene-A3216_07565;Dbxref=NCBI_GP:OAX71144.1;Name=OAX71144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66784.1;locus_tag=A3216_07565;product=short-chain dehydrogenase;protein_id=OAX71144.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 22019 23401 . - . ID=gene-A3216_07570;Name=A3216_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07570 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 22019 23401 . - 0 ID=cds-OAX71145.1;Parent=gene-A3216_07570;Dbxref=NCBI_GP:OAX71145.1;Name=OAX71145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907531.1;locus_tag=A3216_07570;product=decaprenylphosphoryl-beta-D-ribose oxidase;protein_id=OAX71145.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 23469 23897 . - . ID=gene-A3216_07575;Name=A3216_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07575 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 23469 23897 . - 0 ID=cds-OAX71146.1;Parent=gene-A3216_07575;Dbxref=NCBI_GP:OAX71146.1;Name=OAX71146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956764.1;locus_tag=A3216_07575;product=hypothetical protein;protein_id=OAX71146.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 24674 25504 . - . ID=gene-A3216_07580;Name=A3216_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07580 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 24674 25504 . - 0 ID=cds-OAX71147.1;Parent=gene-A3216_07580;Dbxref=NCBI_GP:OAX71147.1;Name=OAX71147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019972577.1;locus_tag=A3216_07580;product=sugar ABC transporter permease;protein_id=OAX71147.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 25554 26474 . - . ID=gene-A3216_07585;Name=A3216_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07585 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 25554 26474 . - 0 ID=cds-OAX71148.1;Parent=gene-A3216_07585;Dbxref=NCBI_GP:OAX71148.1;Name=OAX71148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008263072.1;locus_tag=A3216_07585;product=galactofuranosyl transferase;protein_id=OAX71148.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 26467 27285 . - . ID=gene-A3216_07590;Name=A3216_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07590 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 26467 27285 . - 0 ID=cds-OAX71149.1;Parent=gene-A3216_07590;Dbxref=NCBI_GP:OAX71149.1;Name=OAX71149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907535.1;locus_tag=A3216_07590;product=ABC transporter ATP-binding protein;protein_id=OAX71149.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 27304 27840 . - . ID=gene-A3216_07595;Name=A3216_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07595 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 27304 27840 . - 0 ID=cds-OAX71150.1;Parent=gene-A3216_07595;Dbxref=NCBI_GP:OAX71150.1;Name=OAX71150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011738485.1;locus_tag=A3216_07595;product=hypothetical protein;protein_id=OAX71150.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 27856 29820 . - . ID=gene-A3216_07600;Name=A3216_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07600 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 27856 29820 . - 0 ID=cds-OAX71151.1;Parent=gene-A3216_07600;Dbxref=NCBI_GP:OAX71151.1;Name=OAX71151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907537.1;locus_tag=A3216_07600;product=hypothetical protein;protein_id=OAX71151.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 29947 31143 . + . ID=gene-A3216_07605;Name=A3216_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07605 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 29947 31143 . + 0 ID=cds-OAX71157.1;Parent=gene-A3216_07605;Dbxref=NCBI_GP:OAX71157.1;Name=OAX71157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015309895.1;locus_tag=A3216_07605;product=cysteine desulfurase-like protein;protein_id=OAX71157.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 31140 32150 . - . ID=gene-A3216_07610;Name=A3216_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07610 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 31140 32150 . - 0 ID=cds-OAX71152.1;Parent=gene-A3216_07610;Dbxref=NCBI_GP:OAX71152.1;Name=OAX71152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907539.1;locus_tag=A3216_07610;product=NAD(P)H-quinone oxidoreductase;protein_id=OAX71152.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 32203 32292 . + . ID=gene-A3216_07615;Name=A3216_07615;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_07615 GCA_001648835.1|LVXE01000022.1 tRNAscan-SE tRNA 32203 32292 . + . ID=rna-A3216_07615;Parent=gene-A3216_07615;anticodon=(pos:32237..32239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07615;product=tRNA-Ser GCA_001648835.1|LVXE01000022.1 tRNAscan-SE exon 32203 32292 . + . ID=exon-A3216_07615-1;Parent=rna-A3216_07615;anticodon=(pos:32237..32239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07615;product=tRNA-Ser GCA_001648835.1|LVXE01000022.1 Genbank gene 32386 33621 . - . ID=gene-A3216_07620;Name=A3216_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07620 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 32386 33621 . - 0 ID=cds-OAX71153.1;Parent=gene-A3216_07620;Dbxref=NCBI_GP:OAX71153.1;Name=OAX71153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907540.1;locus_tag=A3216_07620;product=hydrolase;protein_id=OAX71153.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 33632 34468 . - . ID=gene-A3216_07625;Name=A3216_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07625 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 33632 34468 . - 0 ID=cds-OAX71154.1;Parent=gene-A3216_07625;Dbxref=NCBI_GP:OAX71154.1;Name=OAX71154.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907541.1;locus_tag=A3216_07625;product=enoyl-CoA hydratase;protein_id=OAX71154.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 35661 35930 . - . ID=gene-A3216_07630;Name=A3216_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07630 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 35661 35930 . - 0 ID=cds-OAX71155.1;Parent=gene-A3216_07630;Dbxref=NCBI_GP:OAX71155.1;Name=OAX71155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907542.1;locus_tag=A3216_07630;product=hypothetical protein;protein_id=OAX71155.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank pseudogene 36003 36617 . - . ID=gene-A3216_07635;Name=A3216_07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07635;pseudo=true GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 36003 36617 . - 0 ID=cds-A3216_07635;Parent=gene-A3216_07635;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015631042.1;locus_tag=A3216_07635;product=aminotransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 36926 37018 . + . ID=gene-A3216_07640;Name=A3216_07640;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_07640 GCA_001648835.1|LVXE01000022.1 tRNAscan-SE tRNA 36926 37018 . + . ID=rna-A3216_07640;Parent=gene-A3216_07640;anticodon=(pos:36960..36962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07640;product=tRNA-Ser GCA_001648835.1|LVXE01000022.1 tRNAscan-SE exon 36926 37018 . + . ID=exon-A3216_07640-1;Parent=rna-A3216_07640;anticodon=(pos:36960..36962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07640;product=tRNA-Ser GCA_001648835.1|LVXE01000022.1 Genbank gene 37038 37110 . + . ID=gene-A3216_07645;Name=A3216_07645;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_07645 GCA_001648835.1|LVXE01000022.1 tRNAscan-SE tRNA 37038 37110 . + . ID=rna-A3216_07645;Parent=gene-A3216_07645;anticodon=(pos:37071..37073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07645;product=tRNA-Arg GCA_001648835.1|LVXE01000022.1 tRNAscan-SE exon 37038 37110 . + . ID=exon-A3216_07645-1;Parent=rna-A3216_07645;anticodon=(pos:37071..37073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07645;product=tRNA-Arg GCA_001648835.1|LVXE01000022.1 Genbank pseudogene 37191 38149 . - . ID=gene-A3216_07650;Name=A3216_07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07650;pseudo=true GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 37191 38149 . - 0 ID=cds-A3216_07650;Parent=gene-A3216_07650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015357605.1;locus_tag=A3216_07650;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank gene 38840 39280 . - . ID=gene-A3216_07655;Name=A3216_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07655 GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 38840 39280 . - 0 ID=cds-OAX71156.1;Parent=gene-A3216_07655;Dbxref=NCBI_GP:OAX71156.1;Name=OAX71156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008261971.1;locus_tag=A3216_07655;product=cyclase;protein_id=OAX71156.1;transl_table=11 GCA_001648835.1|LVXE01000022.1 Genbank pseudogene 39507 39943 . + . ID=gene-A3216_07660;Name=A3216_07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07660;pseudo=true GCA_001648835.1|LVXE01000022.1 Protein Homology CDS 39507 39943 . + 0 ID=cds-A3216_07660;Parent=gene-A3216_07660;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P95134.1;locus_tag=A3216_07660;product=glycosyl transferase family 1;pseudo=true;transl_table=11 ##sequence-region LVXE01000023.1 1 39740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000023.1 Genbank region 1 39740 . + . ID=LVXE01000023.1:1..39740;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000023.1 Genbank gene 426 1847 . - . ID=gene-A3216_07665;Name=A3216_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07665 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 426 1847 . - 0 ID=cds-OAX71112.1;Parent=gene-A3216_07665;Dbxref=NCBI_GP:OAX71112.1;Name=OAX71112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020730624.1;locus_tag=A3216_07665;product=propionyl-CoA carboxylase subunit beta;protein_id=OAX71112.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 1878 3155 . - . ID=gene-A3216_07670;Name=A3216_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07670 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 1878 3155 . - 0 ID=cds-OAX71113.1;Parent=gene-A3216_07670;Dbxref=NCBI_GP:OAX71113.1;Name=OAX71113.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908458.1;locus_tag=A3216_07670;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OAX71113.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 3168 4418 . - . ID=gene-A3216_07675;Name=A3216_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07675 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 3168 4418 . - 0 ID=cds-OAX71114.1;Parent=gene-A3216_07675;Dbxref=NCBI_GP:OAX71114.1;Name=OAX71114.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003933336.1;locus_tag=A3216_07675;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OAX71114.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 4415 4762 . - . ID=gene-A3216_07680;Name=A3216_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07680 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 4415 4762 . - 0 ID=cds-OAX71115.1;Parent=gene-A3216_07680;Dbxref=NCBI_GP:OAX71115.1;Name=OAX71115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007770614.1;locus_tag=A3216_07680;product=acyl carrier protein;protein_id=OAX71115.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 4862 5776 . - . ID=gene-A3216_07685;Name=A3216_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07685 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 4862 5776 . - 0 ID=cds-OAX71116.1;Parent=gene-A3216_07685;Dbxref=NCBI_GP:OAX71116.1;Name=OAX71116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019699153.1;locus_tag=A3216_07685;product=ACP S-malonyltransferase;protein_id=OAX71116.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 5987 7231 . - . ID=gene-A3216_07690;Name=A3216_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07690 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 5987 7231 . - 0 ID=cds-OAX71117.1;Parent=gene-A3216_07690;Dbxref=NCBI_GP:OAX71117.1;Name=OAX71117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908454.1;locus_tag=A3216_07690;product=PucR family transcriptional regulator;protein_id=OAX71117.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 7317 10127 . - . ID=gene-A3216_07695;Name=A3216_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07695 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 7317 10127 . - 0 ID=cds-OAX71118.1;Parent=gene-A3216_07695;Dbxref=NCBI_GP:OAX71118.1;Name=OAX71118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908453.1;locus_tag=A3216_07695;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=OAX71118.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 10452 10889 . + . ID=gene-A3216_07700;Name=A3216_07700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07700;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 10452 10889 . + 0 ID=cds-A3216_07700;Parent=gene-A3216_07700;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015356257.1;locus_tag=A3216_07700;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 11040 11462 . + . ID=gene-A3216_07705;Name=A3216_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07705 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 11040 11462 . + 0 ID=cds-OAX71119.1;Parent=gene-A3216_07705;Dbxref=NCBI_GP:OAX71119.1;Name=OAX71119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003911787.1;locus_tag=A3216_07705;product=hypothetical protein;protein_id=OAX71119.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 11497 11891 . + . ID=gene-A3216_07710;Name=A3216_07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07710;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 11497 11891 . + 0 ID=cds-A3216_07710;Parent=gene-A3216_07710;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628352.1;locus_tag=A3216_07710;product=peroxiredoxin;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 11977 12051 . + . ID=gene-A3216_07715;Name=A3216_07715;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_07715 GCA_001648835.1|LVXE01000023.1 tRNAscan-SE tRNA 11977 12051 . + . ID=rna-A3216_07715;Parent=gene-A3216_07715;anticodon=(pos:12009..12011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07715;product=tRNA-Val GCA_001648835.1|LVXE01000023.1 tRNAscan-SE exon 11977 12051 . + . ID=exon-A3216_07715-1;Parent=rna-A3216_07715;anticodon=(pos:12009..12011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_07715;product=tRNA-Val GCA_001648835.1|LVXE01000023.1 Genbank gene 14621 15160 . + . ID=gene-A3216_07720;Name=A3216_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07720 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 14621 15160 . + 0 ID=cds-OAX71120.1;Parent=gene-A3216_07720;Dbxref=NCBI_GP:OAX71120.1;Name=OAX71120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07720;product=hypothetical protein;protein_id=OAX71120.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 15121 15504 . + . ID=gene-A3216_07725;Name=A3216_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07725 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 15121 15504 . + 0 ID=cds-OAX71121.1;Parent=gene-A3216_07725;Dbxref=NCBI_GP:OAX71121.1;Name=OAX71121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07725;product=hypothetical protein;protein_id=OAX71121.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 16583 16809 . - . ID=gene-A3216_07730;Name=A3216_07730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07730;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 16583 16809 . - 0 ID=cds-A3216_07730;Parent=gene-A3216_07730;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942217.1;locus_tag=A3216_07730;product=toxin-antitoxin system protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 17518 17772 . - . ID=gene-A3216_07735;Name=A3216_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07735 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 17518 17772 . - 0 ID=cds-OAX71122.1;Parent=gene-A3216_07735;Dbxref=NCBI_GP:OAX71122.1;Name=OAX71122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07735;product=hypothetical protein;protein_id=OAX71122.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 17839 18039 . - . ID=gene-A3216_07740;Name=A3216_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07740 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 17839 18039 . - 0 ID=cds-OAX71123.1;Parent=gene-A3216_07740;Dbxref=NCBI_GP:OAX71123.1;Name=OAX71123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07740;product=hypothetical protein;protein_id=OAX71123.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 18616 19537 . + . ID=gene-A3216_07745;Name=A3216_07745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07745;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 18616 19537 . + 0 ID=cds-A3216_07745;Parent=gene-A3216_07745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q10518.1;locus_tag=A3216_07745;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 19519 20331 . - . ID=gene-A3216_07750;Name=A3216_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07750 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 19519 20331 . - 0 ID=cds-OAX71124.1;Parent=gene-A3216_07750;Dbxref=NCBI_GP:OAX71124.1;Name=OAX71124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908451.1;locus_tag=A3216_07750;product=hypothetical protein;protein_id=OAX71124.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 20331 20772 . - . ID=gene-A3216_07755;Name=A3216_07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07755;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 20331 20772 . - 0 ID=cds-A3216_07755;Parent=gene-A3216_07755;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878184.1;locus_tag=A3216_07755;product=protein tyrosine phosphatase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 20828 21115 . - . ID=gene-A3216_07760;Name=A3216_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07760 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 20828 21115 . - 0 ID=cds-OAX71125.1;Parent=gene-A3216_07760;Dbxref=NCBI_GP:OAX71125.1;Name=OAX71125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07760;product=hypothetical protein;protein_id=OAX71125.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 21309 22236 . + . ID=gene-A3216_07765;Name=A3216_07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07765;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 21309 22236 . + 0 ID=cds-A3216_07765;Parent=gene-A3216_07765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787050.1;locus_tag=A3216_07765;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 22269 23426 . + . ID=gene-A3216_07770;Name=A3216_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07770 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 22269 23426 . + 0 ID=cds-OAX71134.1;Parent=gene-A3216_07770;Dbxref=NCBI_GP:OAX71134.1;Name=OAX71134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69481.1;locus_tag=A3216_07770;product=Nif3-like dinuclear metal center hexameric protein;protein_id=OAX71134.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 23472 24170 . + . ID=gene-A3216_07775;Name=A3216_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07775 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 23472 24170 . + 0 ID=cds-OAX71126.1;Parent=gene-A3216_07775;Dbxref=NCBI_GP:OAX71126.1;Name=OAX71126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBS9.1;locus_tag=A3216_07775;product=hypothetical protein;protein_id=OAX71126.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 24167 25282 . + . ID=gene-A3216_07780;Name=A3216_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07780 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 24167 25282 . + 0 ID=cds-OAX71127.1;Parent=gene-A3216_07780;Dbxref=NCBI_GP:OAX71127.1;Name=OAX71127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908448.1;locus_tag=A3216_07780;product=bifunctional RNase H/acid phosphatase;protein_id=OAX71127.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 27027 27444 . + . ID=gene-A3216_07785;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=A3216_07785 GCA_001648835.1|LVXE01000023.1 cmsearch RNase_P_RNA 27027 27444 . + . ID=rna-A3216_07785;Parent=gene-A3216_07785;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_07785;product=RNase P RNA component class A GCA_001648835.1|LVXE01000023.1 cmsearch exon 27027 27444 . + . ID=exon-A3216_07785-1;Parent=rna-A3216_07785;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_07785;product=RNase P RNA component class A GCA_001648835.1|LVXE01000023.1 Genbank gene 27697 27912 . + . ID=gene-A3216_07790;Name=A3216_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07790 GCA_001648835.1|LVXE01000023.1 GeneMarkS+ CDS 27697 27912 . + 0 ID=cds-OAX71128.1;Parent=gene-A3216_07790;Dbxref=NCBI_GP:OAX71128.1;Name=OAX71128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07790;product=hypothetical protein;protein_id=OAX71128.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 29304 30164 . - . ID=gene-A3216_07795;Name=A3216_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07795 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 29304 30164 . - 0 ID=cds-OAX71129.1;Parent=gene-A3216_07795;Dbxref=NCBI_GP:OAX71129.1;Name=OAX71129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003910899.1;locus_tag=A3216_07795;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=OAX71129.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank pseudogene 30314 31701 . + . ID=gene-A3216_07800;Name=A3216_07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07800;pseudo=true GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 30314 31701 . + 0 ID=cds-A3216_07800;Parent=gene-A3216_07800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878171.1;locus_tag=A3216_07800;product=diacylglycerol O-acyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 31753 33309 . + . ID=gene-A3216_07805;Name=A3216_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07805 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 31753 33309 . + 0 ID=cds-OAX71130.1;Parent=gene-A3216_07805;Dbxref=NCBI_GP:OAX71130.1;Name=OAX71130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170857.1;locus_tag=A3216_07805;product=hydrolase;protein_id=OAX71130.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 33384 34919 . + . ID=gene-A3216_07810;Name=A3216_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07810 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 33384 34919 . + 0 ID=cds-OAX71131.1;Parent=gene-A3216_07810;Dbxref=NCBI_GP:OAX71131.1;Name=OAX71131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908445.1;locus_tag=A3216_07810;product=hydrolase;protein_id=OAX71131.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 35016 36362 . + . ID=gene-A3216_07815;Name=A3216_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07815 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 35016 36362 . + 0 ID=cds-OAX71132.1;Parent=gene-A3216_07815;Dbxref=NCBI_GP:OAX71132.1;Name=OAX71132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005144598.1;locus_tag=A3216_07815;product=type I glutamate--ammonia ligase;protein_id=OAX71132.1;transl_table=11 GCA_001648835.1|LVXE01000023.1 Genbank gene 36411 39407 . + . ID=gene-A3216_07820;Name=A3216_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07820 GCA_001648835.1|LVXE01000023.1 Protein Homology CDS 36411 39407 . + 0 ID=cds-OAX71133.1;Parent=gene-A3216_07820;Dbxref=NCBI_GP:OAX71133.1;Name=OAX71133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014384545.1;locus_tag=A3216_07820;product=bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase;protein_id=OAX71133.1;transl_table=11 ##sequence-region LVXE01000024.1 1 38957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000024.1 Genbank region 1 38957 . + . ID=LVXE01000024.1:1..38957;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000024.1 Genbank gene 3 293 . - . ID=gene-A3216_07825;Name=A3216_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07825 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 3 293 . - 0 ID=cds-OAX71084.1;Parent=gene-A3216_07825;Dbxref=NCBI_GP:OAX71084.1;Name=OAX71084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07825;product=hypothetical protein;protein_id=OAX71084.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 402 1372 . + . ID=gene-A3216_07830;Name=A3216_07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07830;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 402 1372 . + 0 ID=cds-A3216_07830;Parent=gene-A3216_07830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003905225.1;locus_tag=A3216_07830;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 1394 1827 . + . ID=gene-A3216_07835;Name=A3216_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07835;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 1394 1827 . + 0 ID=cds-A3216_07835;Parent=gene-A3216_07835;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629250.1;locus_tag=A3216_07835;product=HIT family hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 1801 2142 . - . ID=gene-A3216_07840;Name=A3216_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07840 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 1801 2142 . - 0 ID=cds-OAX71085.1;Parent=gene-A3216_07840;Dbxref=NCBI_GP:OAX71085.1;Name=OAX71085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908133.1;locus_tag=A3216_07840;product=hypothetical protein;protein_id=OAX71085.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 2617 3306 . - . ID=gene-A3216_07845;Name=A3216_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07845 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 2617 3306 . - 0 ID=cds-OAX71106.1;Parent=gene-A3216_07845;Dbxref=NCBI_GP:OAX71106.1;Name=OAX71106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC91.1;locus_tag=A3216_07845;product=hypothetical protein;protein_id=OAX71106.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 3597 4687 . + . ID=gene-A3216_07850;Name=A3216_07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07850;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 3597 4687 . + 0 ID=cds-A3216_07850;Parent=gene-A3216_07850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395755.1;locus_tag=A3216_07850;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 4791 6110 . + . ID=gene-A3216_07855;Name=A3216_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07855 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 4791 6110 . + 0 ID=cds-OAX71107.1;Parent=gene-A3216_07855;Dbxref=NCBI_GP:OAX71107.1;Name=OAX71107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003885402.1;locus_tag=A3216_07855;product=FAD-linked oxidase;protein_id=OAX71107.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 6121 7245 . + . ID=gene-A3216_07860;Name=A3216_07860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07860;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 6121 7245 . + 0 ID=cds-A3216_07860;Parent=gene-A3216_07860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878434.1;locus_tag=A3216_07860;product=cytochrome;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 7361 7687 . + . ID=gene-A3216_07865;Name=A3216_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07865 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 7361 7687 . + 0 ID=cds-OAX71086.1;Parent=gene-A3216_07865;Dbxref=NCBI_GP:OAX71086.1;Name=OAX71086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07865;product=hypothetical protein;protein_id=OAX71086.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 8304 8678 . + . ID=gene-A3216_07870;Name=A3216_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07870 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 8304 8678 . + 0 ID=cds-OAX71087.1;Parent=gene-A3216_07870;Dbxref=NCBI_GP:OAX71087.1;Name=OAX71087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07870;product=hypothetical protein;protein_id=OAX71087.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 8797 9936 . - . ID=gene-A3216_07875;Name=A3216_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07875 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 8797 9936 . - 0 ID=cds-OAX71088.1;Parent=gene-A3216_07875;Dbxref=NCBI_GP:OAX71088.1;Name=OAX71088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019735675.1;locus_tag=A3216_07875;product=acyltransferase;protein_id=OAX71088.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 9933 11669 . - . ID=gene-A3216_07880;Name=A3216_07880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07880;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 9933 11669 . - 0 ID=cds-A3216_07880;Parent=gene-A3216_07880;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011724115.1;locus_tag=A3216_07880;product=cold-shock protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 11803 12411 . + . ID=gene-A3216_07885;Name=A3216_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07885 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 11803 12411 . + 0 ID=cds-OAX71089.1;Parent=gene-A3216_07885;Dbxref=NCBI_GP:OAX71089.1;Name=OAX71089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC94.1;locus_tag=A3216_07885;product=hypothetical protein;protein_id=OAX71089.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 12462 15905 . + . ID=gene-A3216_07890;Name=A3216_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07890 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 12462 15905 . + 0 ID=cds-OAX71090.1;Parent=gene-A3216_07890;Dbxref=NCBI_GP:OAX71090.1;Name=OAX71090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908128.1;locus_tag=A3216_07890;product=nuclease;protein_id=OAX71090.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 16246 16671 . - . ID=gene-A3216_07895;Name=A3216_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07895 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 16246 16671 . - 0 ID=cds-OAX71091.1;Parent=gene-A3216_07895;Dbxref=NCBI_GP:OAX71091.1;Name=OAX71091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07895;product=hypothetical protein;protein_id=OAX71091.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 16659 16892 . - . ID=gene-A3216_07900;Name=A3216_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07900 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 16659 16892 . - 0 ID=cds-OAX71092.1;Parent=gene-A3216_07900;Dbxref=NCBI_GP:OAX71092.1;Name=OAX71092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07900;product=hypothetical protein;protein_id=OAX71092.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 16919 17143 . - . ID=gene-A3216_07905;Name=A3216_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07905 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 16919 17143 . - 0 ID=cds-OAX71093.1;Parent=gene-A3216_07905;Dbxref=NCBI_GP:OAX71093.1;Name=OAX71093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07905;product=hypothetical protein;protein_id=OAX71093.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 17385 17612 . + . ID=gene-A3216_07910;Name=A3216_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07910 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 17385 17612 . + 0 ID=cds-OAX71094.1;Parent=gene-A3216_07910;Dbxref=NCBI_GP:OAX71094.1;Name=OAX71094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07910;product=hypothetical protein;protein_id=OAX71094.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 17947 18621 . + . ID=gene-A3216_07915;Name=A3216_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07915 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 17947 18621 . + 0 ID=cds-OAX71095.1;Parent=gene-A3216_07915;Dbxref=NCBI_GP:OAX71095.1;Name=OAX71095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908127.1;locus_tag=A3216_07915;product=hypothetical protein;protein_id=OAX71095.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 18809 22525 . + . ID=gene-A3216_07920;Name=kgd;gbkey=Gene;gene=kgd;gene_biotype=protein_coding;locus_tag=A3216_07920 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 18809 22525 . + 0 ID=cds-OAX71096.1;Parent=gene-A3216_07920;Dbxref=NCBI_GP:OAX71096.1;Name=OAX71096.1;Note=kgd%3B produces succinic semialdehyde%3B part of alternative pathway from alpha-ketoglutarate to succinate%3B essential for normal growth;gbkey=CDS;gene=kgd;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941458.1;locus_tag=A3216_07920;product=alpha-ketoglutarate decarboxylase;protein_id=OAX71096.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 22588 23421 . + . ID=gene-A3216_07925;Name=A3216_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07925 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 22588 23421 . + 0 ID=cds-OAX71097.1;Parent=gene-A3216_07925;Dbxref=NCBI_GP:OAX71097.1;Name=OAX71097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908125.1;locus_tag=A3216_07925;product=acetoin dehydrogenase;protein_id=OAX71097.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 23967 24824 . - . ID=gene-A3216_07930;Name=A3216_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07930 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 23967 24824 . - 0 ID=cds-OAX71098.1;Parent=gene-A3216_07930;Dbxref=NCBI_GP:OAX71098.1;Name=OAX71098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908124.1;locus_tag=A3216_07930;product=hypothetical protein;protein_id=OAX71098.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank pseudogene 24821 25994 . - . ID=gene-A3216_07935;Name=A3216_07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07935;pseudo=true GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 24821 25994 . - 0 ID=cds-A3216_07935;Parent=gene-A3216_07935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629298.1;locus_tag=A3216_07935;product=malate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 26552 26896 . + . ID=gene-A3216_07940;Name=A3216_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07940 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 26552 26896 . + 0 ID=cds-OAX71099.1;Parent=gene-A3216_07940;Dbxref=NCBI_GP:OAX71099.1;Name=OAX71099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07940;product=hypothetical protein;protein_id=OAX71099.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 26893 27882 . - . ID=gene-A3216_07945;Name=A3216_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07945 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 26893 27882 . - 0 ID=cds-OAX71100.1;Parent=gene-A3216_07945;Dbxref=NCBI_GP:OAX71100.1;Name=OAX71100.1;Note=catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014211984.1;locus_tag=A3216_07945;product=malate dehydrogenase;protein_id=OAX71100.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 28105 29214 . + . ID=gene-A3216_07950;Name=A3216_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07950 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 28105 29214 . + 0 ID=cds-OAX71108.1;Parent=gene-A3216_07950;Dbxref=NCBI_GP:OAX71108.1;Name=OAX71108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908122.1;locus_tag=A3216_07950;product=magnesium and cobalt transport protein CorA;protein_id=OAX71108.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 29843 31021 . - . ID=gene-A3216_07955;Name=A3216_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07955 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 29843 31021 . - 0 ID=cds-OAX71101.1;Parent=gene-A3216_07955;Dbxref=NCBI_GP:OAX71101.1;Name=OAX71101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908121.1;locus_tag=A3216_07955;product=ABC transporter ATP-binding protein;protein_id=OAX71101.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 31026 31889 . - . ID=gene-A3216_07960;Name=A3216_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07960 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 31026 31889 . - 0 ID=cds-OAX71109.1;Parent=gene-A3216_07960;Dbxref=NCBI_GP:OAX71109.1;Name=OAX71109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908120.1;locus_tag=A3216_07960;product=sugar ABC transporter permease;protein_id=OAX71109.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 31879 32793 . - . ID=gene-A3216_07965;Name=A3216_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07965 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 31879 32793 . - 0 ID=cds-OAX71102.1;Parent=gene-A3216_07965;Dbxref=NCBI_GP:OAX71102.1;Name=OAX71102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908119.1;locus_tag=A3216_07965;product=ABC transporter permease;protein_id=OAX71102.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 32822 34228 . - . ID=gene-A3216_07970;Name=A3216_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07970 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 32822 34228 . - 0 ID=cds-OAX71110.1;Parent=gene-A3216_07970;Dbxref=NCBI_GP:OAX71110.1;Name=OAX71110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908118.1;locus_tag=A3216_07970;product=ABC transporter substrate-binding protein;protein_id=OAX71110.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 35088 35714 . + . ID=gene-A3216_07975;Name=A3216_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07975 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 35088 35714 . + 0 ID=cds-OAX71111.1;Parent=gene-A3216_07975;Dbxref=NCBI_GP:OAX71111.1;Name=OAX71111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395781.1;locus_tag=A3216_07975;product=hypothetical protein;protein_id=OAX71111.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 35711 36049 . - . ID=gene-A3216_07980;Name=A3216_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07980 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 35711 36049 . - 0 ID=cds-OAX71103.1;Parent=gene-A3216_07980;Dbxref=NCBI_GP:OAX71103.1;Name=OAX71103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07980;product=hypothetical protein;protein_id=OAX71103.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 37068 37430 . + . ID=gene-A3216_07985;Name=A3216_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07985 GCA_001648835.1|LVXE01000024.1 GeneMarkS+ CDS 37068 37430 . + 0 ID=cds-OAX71104.1;Parent=gene-A3216_07985;Dbxref=NCBI_GP:OAX71104.1;Name=OAX71104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07985;product=hypothetical protein;protein_id=OAX71104.1;transl_table=11 GCA_001648835.1|LVXE01000024.1 Genbank gene 37647 38798 . + . ID=gene-A3216_07990;Name=A3216_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_07990 GCA_001648835.1|LVXE01000024.1 Protein Homology CDS 37647 38798 . + 0 ID=cds-OAX71105.1;Parent=gene-A3216_07990;Dbxref=NCBI_GP:OAX71105.1;Name=OAX71105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53382.2;locus_tag=A3216_07990;product=sodium:proton antiporter;protein_id=OAX71105.1;transl_table=11 ##sequence-region LVXE01000025.1 1 38157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000025.1 Genbank region 1 38157 . + . ID=LVXE01000025.1:1..38157;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 1 280 . + . ID=gene-A3216_07995;Name=A3216_07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_07995;pseudo=true GCA_001648835.1|LVXE01000025.1 GeneMarkS+ CDS 1 280 . + 1 ID=cds-A3216_07995;Parent=gene-A3216_07995;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_07995;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 323 604 . + . ID=gene-A3216_08000;Name=A3216_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08000 GCA_001648835.1|LVXE01000025.1 GeneMarkS+ CDS 323 604 . + 0 ID=cds-OAX71059.1;Parent=gene-A3216_08000;Dbxref=NCBI_GP:OAX71059.1;Name=OAX71059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08000;product=hypothetical protein;protein_id=OAX71059.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 837 2181 . - . ID=gene-A3216_08005;Name=A3216_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08005;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 837 2181 . - 0 ID=cds-A3216_08005;Parent=gene-A3216_08005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978241.1;locus_tag=A3216_08005;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 2211 3797 . + . ID=gene-A3216_08010;Name=A3216_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08010 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 2211 3797 . + 0 ID=cds-OAX71060.1;Parent=gene-A3216_08010;Dbxref=NCBI_GP:OAX71060.1;Name=OAX71060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003900609.1;locus_tag=A3216_08010;product=phosphoglycerate dehydrogenase;protein_id=OAX71060.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 3847 4857 . + . ID=gene-A3216_08015;Name=A3216_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08015 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 3847 4857 . + 0 ID=cds-OAX71061.1;Parent=gene-A3216_08015;Dbxref=NCBI_GP:OAX71061.1;Name=OAX71061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171319.1;locus_tag=A3216_08015;product=3-isopropylmalate dehydrogenase;protein_id=OAX71061.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 4882 6050 . - . ID=gene-A3216_08020;Name=A3216_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08020;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 4882 6050 . - 0 ID=cds-A3216_08020;Parent=gene-A3216_08020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015294086.1;locus_tag=A3216_08020;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 6117 6923 . + . ID=gene-A3216_08025;Name=A3216_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08025 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 6117 6923 . + 0 ID=cds-OAX71062.1;Parent=gene-A3216_08025;Dbxref=NCBI_GP:OAX71062.1;Name=OAX71062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380735.1;locus_tag=A3216_08025;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=OAX71062.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 6920 8428 . + . ID=gene-A3216_08030;Name=A3216_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08030 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 6920 8428 . + 0 ID=cds-OAX71063.1;Parent=gene-A3216_08030;Dbxref=NCBI_GP:OAX71063.1;Name=OAX71063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33120.1;locus_tag=A3216_08030;product=glutamate--tRNA ligase;protein_id=OAX71063.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 8669 8743 . + . ID=gene-A3216_08035;Name=A3216_08035;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08035 GCA_001648835.1|LVXE01000025.1 tRNAscan-SE tRNA 8669 8743 . + . ID=rna-A3216_08035;Parent=gene-A3216_08035;anticodon=(pos:8702..8704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08035;product=tRNA-Gln GCA_001648835.1|LVXE01000025.1 tRNAscan-SE exon 8669 8743 . + . ID=exon-A3216_08035-1;Parent=rna-A3216_08035;anticodon=(pos:8702..8704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08035;product=tRNA-Gln GCA_001648835.1|LVXE01000025.1 Genbank gene 8831 8906 . + . ID=gene-A3216_08040;Name=A3216_08040;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08040 GCA_001648835.1|LVXE01000025.1 tRNAscan-SE tRNA 8831 8906 . + . ID=rna-A3216_08040;Parent=gene-A3216_08040;anticodon=(pos:8865..8867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08040;product=tRNA-Glu GCA_001648835.1|LVXE01000025.1 tRNAscan-SE exon 8831 8906 . + . ID=exon-A3216_08040-1;Parent=rna-A3216_08040;anticodon=(pos:8865..8867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08040;product=tRNA-Glu GCA_001648835.1|LVXE01000025.1 Genbank gene 9292 9516 . + . ID=gene-A3216_08045;Name=A3216_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08045 GCA_001648835.1|LVXE01000025.1 GeneMarkS+ CDS 9292 9516 . + 0 ID=cds-OAX71064.1;Parent=gene-A3216_08045;Dbxref=NCBI_GP:OAX71064.1;Name=OAX71064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08045;product=hypothetical protein;protein_id=OAX71064.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 9595 10305 . - . ID=gene-A3216_08050;Name=A3216_08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08050;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 9595 10305 . - 0 ID=cds-A3216_08050;Parent=gene-A3216_08050;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003889230.1;locus_tag=A3216_08050;product=IclR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 10389 11840 . + . ID=gene-A3216_08055;Name=A3216_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08055 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 10389 11840 . + 0 ID=cds-OAX71065.1;Parent=gene-A3216_08055;Dbxref=NCBI_GP:OAX71065.1;Name=OAX71065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007775506.1;locus_tag=A3216_08055;product=3-isopropylmalate dehydratase large subunit;protein_id=OAX71065.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 11883 12479 . + . ID=gene-A3216_08060;Name=A3216_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08060 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 11883 12479 . + 0 ID=cds-OAX71066.1;Parent=gene-A3216_08060;Dbxref=NCBI_GP:OAX71066.1;Name=OAX71066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019735337.1;locus_tag=A3216_08060;product=3-isopropylmalate dehydratase small subunit;protein_id=OAX71066.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 12693 13295 . + . ID=gene-A3216_08065;Name=A3216_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08065 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 12693 13295 . + 0 ID=cds-OAX71067.1;Parent=gene-A3216_08065;Dbxref=NCBI_GP:OAX71067.1;Name=OAX71067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33125.1;locus_tag=A3216_08065;product=DNA-binding protein;protein_id=OAX71067.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 13364 14302 . - . ID=gene-A3216_08070;Name=A3216_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08070 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 13364 14302 . - 0 ID=cds-OAX71068.1;Parent=gene-A3216_08070;Dbxref=NCBI_GP:OAX71068.1;Name=OAX71068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007775500.1;locus_tag=A3216_08070;product=NUDIX hydrolase;protein_id=OAX71068.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 14378 16597 . - . ID=gene-A3216_08075;Name=A3216_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08075 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 14378 16597 . - 0 ID=cds-OAX71069.1;Parent=gene-A3216_08075;Dbxref=NCBI_GP:OAX71069.1;Name=OAX71069.1;Note=catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33127.1;locus_tag=A3216_08075;product=RNA degradosome polyphosphate kinase;protein_id=OAX71069.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 16681 17331 . - . ID=gene-A3216_08080;Name=A3216_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08080 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 16681 17331 . - 0 ID=cds-OAX71070.1;Parent=gene-A3216_08080;Dbxref=NCBI_GP:OAX71070.1;Name=OAX71070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33128.1;locus_tag=A3216_08080;product=2-phospho-L-lactate guanylyltransferase;protein_id=OAX71070.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 17878 18927 . + . ID=gene-A3216_08085;Name=A3216_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08085 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 17878 18927 . + 0 ID=cds-OAX71080.1;Parent=gene-A3216_08085;Dbxref=NCBI_GP:OAX71080.1;Name=OAX71080.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978224.1;locus_tag=A3216_08085;product=glycerol-3-phosphate dehydrogenase;protein_id=OAX71080.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 19039 20193 . + . ID=gene-A3216_08090;Name=A3216_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08090 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 19039 20193 . + 0 ID=cds-OAX71071.1;Parent=gene-A3216_08090;Dbxref=NCBI_GP:OAX71071.1;Name=OAX71071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBS0.1;locus_tag=A3216_08090;product=D-alanine--D-alanine ligase A;protein_id=OAX71071.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 20202 20777 . - . ID=gene-A3216_08095;Name=A3216_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08095 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 20202 20777 . - 0 ID=cds-OAX71081.1;Parent=gene-A3216_08095;Dbxref=NCBI_GP:OAX71081.1;Name=OAX71081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908472.1;locus_tag=A3216_08095;product=hypothetical protein;protein_id=OAX71081.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 20961 21938 . + . ID=gene-A3216_08100;Name=A3216_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08100 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 20961 21938 . + 0 ID=cds-OAX71082.1;Parent=gene-A3216_08100;Dbxref=NCBI_GP:OAX71082.1;Name=OAX71082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908471.1;locus_tag=A3216_08100;product=thiamine-phosphate kinase;protein_id=OAX71082.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 22052 22735 . + . ID=gene-A3216_08105;Name=A3216_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08105 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 22052 22735 . + 0 ID=cds-OAX71072.1;Parent=gene-A3216_08105;Dbxref=NCBI_GP:OAX71072.1;Name=OAX71072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003415031.1;locus_tag=A3216_08105;product=uracil-DNA glycosylase;protein_id=OAX71072.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 22873 23052 . + . ID=gene-A3216_08110;Name=A3216_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08110 GCA_001648835.1|LVXE01000025.1 GeneMarkS+ CDS 22873 23052 . + 0 ID=cds-OAX71073.1;Parent=gene-A3216_08110;Dbxref=NCBI_GP:OAX71073.1;Name=OAX71073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08110;product=hypothetical protein;protein_id=OAX71073.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 23639 25055 . + . ID=gene-A3216_08115;Name=A3216_08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08115;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 23639 25055 . + 0 ID=cds-A3216_08115;Parent=gene-A3216_08115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015456466.1;locus_tag=A3216_08115;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 25058 27289 . + . ID=gene-A3216_08120;Name=A3216_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08120 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 25058 27289 . + 0 ID=cds-OAX71074.1;Parent=gene-A3216_08120;Dbxref=NCBI_GP:OAX71074.1;Name=OAX71074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382994.1;locus_tag=A3216_08120;product=ATP-dependent DNA helicase RecG;protein_id=OAX71074.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 27374 28070 . + . ID=gene-A3216_08125;Name=A3216_08125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08125;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 27374 28070 . + 0 ID=cds-A3216_08125;Parent=gene-A3216_08125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171348.1;locus_tag=A3216_08125;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 28108 28956 . - . ID=gene-A3216_08130;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=A3216_08130 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 28108 28956 . - 0 ID=cds-OAX71075.1;Parent=gene-A3216_08130;Dbxref=NCBI_GP:OAX71075.1;Name=OAX71075.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;inference=EXISTENCE: similar to AA sequence:SwissProt:O69462.1;locus_tag=A3216_08130;product=2%2C5-didehydrogluconate reductase A;protein_id=OAX71075.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 28958 29677 . - . ID=gene-A3216_08135;Name=A3216_08135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08135;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 28958 29677 . - 0 ID=cds-A3216_08135;Parent=gene-A3216_08135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626513.1;locus_tag=A3216_08135;product=oxidoreductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 29849 30893 . + . ID=gene-A3216_08140;Name=A3216_08140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08140;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 29849 30893 . + 0 ID=cds-A3216_08140;Parent=gene-A3216_08140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393556.1;locus_tag=A3216_08140;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 30982 31758 . + . ID=gene-A3216_08145;Name=A3216_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08145 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 30982 31758 . + 0 ID=cds-OAX71083.1;Parent=gene-A3216_08145;Dbxref=NCBI_GP:OAX71083.1;Name=OAX71083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020786514.1;locus_tag=A3216_08145;product=hypothetical protein;protein_id=OAX71083.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 31767 32411 . + . ID=gene-A3216_08150;Name=A3216_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08150 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 31767 32411 . + 0 ID=cds-OAX71076.1;Parent=gene-A3216_08150;Dbxref=NCBI_GP:OAX71076.1;Name=OAX71076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908466.1;locus_tag=A3216_08150;product=hypothetical protein;protein_id=OAX71076.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank pseudogene 32416 35824 . + . ID=gene-A3216_08155;Name=A3216_08155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08155;pseudo=true GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 32416 35824 . + 0 ID=cds-A3216_08155;Parent=gene-A3216_08155;Note=biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017206665.1;locus_tag=A3216_08155;product=pyruvate carboxylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 35821 36375 . + . ID=gene-A3216_08160;Name=A3216_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08160 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 35821 36375 . + 0 ID=cds-OAX71077.1;Parent=gene-A3216_08160;Dbxref=NCBI_GP:OAX71077.1;Name=OAX71077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380717.1;locus_tag=A3216_08160;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=OAX71077.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 36398 36880 . + . ID=gene-A3216_08165;Name=A3216_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08165 GCA_001648835.1|LVXE01000025.1 Protein Homology CDS 36398 36880 . + 0 ID=cds-OAX71078.1;Parent=gene-A3216_08165;Dbxref=NCBI_GP:OAX71078.1;Name=OAX71078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73VL1.1;locus_tag=A3216_08165;product=pantetheine-phosphate adenylyltransferase;protein_id=OAX71078.1;transl_table=11 GCA_001648835.1|LVXE01000025.1 Genbank gene 37424 37672 . - . ID=gene-A3216_08170;Name=A3216_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08170 GCA_001648835.1|LVXE01000025.1 GeneMarkS+ CDS 37424 37672 . - 0 ID=cds-OAX71079.1;Parent=gene-A3216_08170;Dbxref=NCBI_GP:OAX71079.1;Name=OAX71079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08170;product=hypothetical protein;protein_id=OAX71079.1;transl_table=11 ##sequence-region LVXE01000026.1 1 36574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000026.1 Genbank region 1 36574 . + . ID=LVXE01000026.1:1..36574;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000026.1 Genbank gene 300 563 . - . ID=gene-A3216_08175;Name=A3216_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08175 GCA_001648835.1|LVXE01000026.1 GeneMarkS+ CDS 300 563 . - 0 ID=cds-OAX71029.1;Parent=gene-A3216_08175;Dbxref=NCBI_GP:OAX71029.1;Name=OAX71029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08175;product=hypothetical protein;protein_id=OAX71029.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 733 984 . + . ID=gene-A3216_08180;Name=A3216_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08180 GCA_001648835.1|LVXE01000026.1 GeneMarkS+ CDS 733 984 . + 0 ID=cds-OAX71030.1;Parent=gene-A3216_08180;Dbxref=NCBI_GP:OAX71030.1;Name=OAX71030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08180;product=hypothetical protein;protein_id=OAX71030.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 968 1282 . - . ID=gene-A3216_08185;Name=A3216_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08185 GCA_001648835.1|LVXE01000026.1 GeneMarkS+ CDS 968 1282 . - 0 ID=cds-OAX71031.1;Parent=gene-A3216_08185;Dbxref=NCBI_GP:OAX71031.1;Name=OAX71031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08185;product=hypothetical protein;protein_id=OAX71031.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 2391 2738 . - . ID=gene-A3216_08190;Name=A3216_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08190 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 2391 2738 . - 0 ID=cds-OAX71032.1;Parent=gene-A3216_08190;Dbxref=NCBI_GP:OAX71032.1;Name=OAX71032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006244769.1;locus_tag=A3216_08190;product=metal-sulfur cluster biosynthetic enzyme;protein_id=OAX71032.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 2713 3210 . - . ID=gene-A3216_08195;Name=A3216_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08195 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 2713 3210 . - 0 ID=cds-OAX71033.1;Parent=gene-A3216_08195;Dbxref=NCBI_GP:OAX71033.1;Name=OAX71033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907830.1;locus_tag=A3216_08195;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=OAX71033.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 3207 4463 . - . ID=gene-A3216_08200;Name=A3216_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08200 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 3207 4463 . - 0 ID=cds-OAX71034.1;Parent=gene-A3216_08200;Dbxref=NCBI_GP:OAX71034.1;Name=OAX71034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49690.1;locus_tag=A3216_08200;product=cysteine desulfurase;protein_id=OAX71034.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 4466 5248 . - . ID=gene-A3216_08205;Name=A3216_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08205 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 4466 5248 . - 0 ID=cds-OAX71035.1;Parent=gene-A3216_08205;Dbxref=NCBI_GP:OAX71035.1;Name=OAX71035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907828.1;locus_tag=A3216_08205;product=Fe-S cluster assembly ATPase SufC;protein_id=OAX71035.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 5245 6423 . - . ID=gene-A3216_08210;Name=A3216_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08210 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 5245 6423 . - 0 ID=cds-OAX71036.1;Parent=gene-A3216_08210;Dbxref=NCBI_GP:OAX71036.1;Name=OAX71036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49682.1;locus_tag=A3216_08210;product=Fe-S cluster assembly protein SufD;protein_id=OAX71036.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 6420 9029 . - . ID=gene-A3216_08215;Name=A3216_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08215 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 6420 9029 . - 0 ID=cds-OAX71037.1;Parent=gene-A3216_08215;Dbxref=NCBI_GP:OAX71037.1;Name=OAX71037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49689.2;locus_tag=A3216_08215;product=Fe-S cluster assembly protein SufB;protein_id=OAX71037.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 9081 9845 . - . ID=gene-A3216_08220;Name=A3216_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08220 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 9081 9845 . - 0 ID=cds-OAX71038.1;Parent=gene-A3216_08220;Dbxref=NCBI_GP:OAX71038.1;Name=OAX71038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907825.1;locus_tag=A3216_08220;product=DNA-binding protein;protein_id=OAX71038.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 9961 11742 . + . ID=gene-A3216_08225;Name=A3216_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08225 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 9961 11742 . + 0 ID=cds-OAX71039.1;Parent=gene-A3216_08225;Dbxref=NCBI_GP:OAX71039.1;Name=OAX71039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907824.1;locus_tag=A3216_08225;product=hypothetical protein;protein_id=OAX71039.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 11739 12686 . + . ID=gene-A3216_08230;Name=A3216_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08230 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 11739 12686 . + 0 ID=cds-OAX71040.1;Parent=gene-A3216_08230;Dbxref=NCBI_GP:OAX71040.1;Name=OAX71040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907823.1;locus_tag=A3216_08230;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=OAX71040.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 12686 13483 . + . ID=gene-A3216_08235;Name=A3216_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08235 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 12686 13483 . + 0 ID=cds-OAX71041.1;Parent=gene-A3216_08235;Dbxref=NCBI_GP:OAX71041.1;Name=OAX71041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907822.1;locus_tag=A3216_08235;product=multidrug ABC transporter permease;protein_id=OAX71041.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 13617 13859 . - . ID=gene-A3216_08240;Name=A3216_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08240 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 13617 13859 . - 0 ID=cds-OAX71042.1;Parent=gene-A3216_08240;Dbxref=NCBI_GP:OAX71042.1;Name=OAX71042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907821.1;locus_tag=A3216_08240;product=hypothetical protein;protein_id=OAX71042.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 14114 15049 . + . ID=gene-A3216_08245;Name=A3216_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08245 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 14114 15049 . + 0 ID=cds-OAX71056.1;Parent=gene-A3216_08245;Dbxref=NCBI_GP:OAX71056.1;Name=OAX71056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907820.1;locus_tag=A3216_08245;product=hypothetical protein;protein_id=OAX71056.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank pseudogene 15062 15885 . - . ID=gene-A3216_08250;Name=A3216_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08250;pseudo=true GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 15062 15885 . - 0 ID=cds-A3216_08250;Parent=gene-A3216_08250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739942.1;locus_tag=A3216_08250;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank pseudogene 15907 16819 . + . ID=gene-A3216_08255;Name=A3216_08255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08255;pseudo=true GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 15907 16819 . + 0 ID=cds-A3216_08255;Parent=gene-A3216_08255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380454.1;locus_tag=A3216_08255;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 16848 17750 . - . ID=gene-A3216_08260;Name=A3216_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08260 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 16848 17750 . - 0 ID=cds-OAX71043.1;Parent=gene-A3216_08260;Dbxref=NCBI_GP:OAX71043.1;Name=OAX71043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009977580.1;locus_tag=A3216_08260;product=protoheme IX farnesyltransferase;protein_id=OAX71043.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 18013 20112 . + . ID=gene-A3216_08265;Name=A3216_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08265 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 18013 20112 . + 0 ID=cds-OAX71044.1;Parent=gene-A3216_08265;Dbxref=NCBI_GP:OAX71044.1;Name=OAX71044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380456.1;locus_tag=A3216_08265;product=transketolase;protein_id=OAX71044.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 20129 21256 . + . ID=gene-A3216_08270;Name=A3216_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08270 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 20129 21256 . + 0 ID=cds-OAX71045.1;Parent=gene-A3216_08270;Dbxref=NCBI_GP:OAX71045.1;Name=OAX71045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q741B5.1;locus_tag=A3216_08270;product=transaldolase;protein_id=OAX71045.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank pseudogene 21355 22745 . + . ID=gene-A3216_08275;Name=A3216_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08275;pseudo=true GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 21355 22745 . + 0 ID=cds-A3216_08275;Parent=gene-A3216_08275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382827.1;locus_tag=A3216_08275;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 22919 23716 . + . ID=gene-A3216_08280;Name=A3216_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08280 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 22919 23716 . + 0 ID=cds-OAX71046.1;Parent=gene-A3216_08280;Dbxref=NCBI_GP:OAX71046.1;Name=OAX71046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907816.1;locus_tag=A3216_08280;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;protein_id=OAX71046.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 23732 24475 . + . ID=gene-A3216_08285;Name=A3216_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08285 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 23732 24475 . + 0 ID=cds-OAX71047.1;Parent=gene-A3216_08285;Dbxref=NCBI_GP:OAX71047.1;Name=OAX71047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49700.1;locus_tag=A3216_08285;product=6-phosphogluconolactonase;protein_id=OAX71047.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank pseudogene 24699 27516 . - . ID=gene-A3216_08290;Name=A3216_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08290;pseudo=true GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 24699 27516 . - 0 ID=cds-A3216_08290;Parent=gene-A3216_08290;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019694866.1;locus_tag=A3216_08290;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 27547 27780 . - . ID=gene-A3216_08295;Name=A3216_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08295 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 27547 27780 . - 0 ID=cds-OAX71048.1;Parent=gene-A3216_08295;Dbxref=NCBI_GP:OAX71048.1;Name=OAX71048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66792.1;locus_tag=A3216_08295;product=preprotein translocase subunit SecG;protein_id=OAX71048.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 27792 28022 . - . ID=gene-A3216_08300;Name=A3216_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08300 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 27792 28022 . - 0 ID=cds-OAX71049.1;Parent=gene-A3216_08300;Dbxref=NCBI_GP:OAX71049.1;Name=OAX71049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907812.1;locus_tag=A3216_08300;product=hypothetical protein;protein_id=OAX71049.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 28838 29056 . - . ID=gene-A3216_08305;Name=A3216_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08305 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 28838 29056 . - 0 ID=cds-OAX71050.1;Parent=gene-A3216_08305;Dbxref=NCBI_GP:OAX71050.1;Name=OAX71050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907811.1;locus_tag=A3216_08305;product=hypothetical protein;protein_id=OAX71050.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 29214 29531 . - . ID=gene-A3216_08310;Name=A3216_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08310 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 29214 29531 . - 0 ID=cds-OAX71057.1;Parent=gene-A3216_08310;Dbxref=NCBI_GP:OAX71057.1;Name=OAX71057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907810.1;locus_tag=A3216_08310;product=hypothetical protein;protein_id=OAX71057.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 29528 29803 . - . ID=gene-A3216_08315;Name=A3216_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08315 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 29528 29803 . - 0 ID=cds-OAX71051.1;Parent=gene-A3216_08315;Dbxref=NCBI_GP:OAX71051.1;Name=OAX71051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907809.1;locus_tag=A3216_08315;product=hypothetical protein;protein_id=OAX71051.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 29787 30572 . - . ID=gene-A3216_08320;Name=A3216_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08320 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 29787 30572 . - 0 ID=cds-OAX71052.1;Parent=gene-A3216_08320;Dbxref=NCBI_GP:OAX71052.1;Name=OAX71052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014213548.1;locus_tag=A3216_08320;product=triose-phosphate isomerase;protein_id=OAX71052.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 30569 31819 . - . ID=gene-A3216_08325;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=A3216_08325 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 30569 31819 . - 0 ID=cds-OAX71053.1;Parent=gene-A3216_08325;Dbxref=NCBI_GP:OAX71053.1;Name=OAX71053.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;inference=EXISTENCE: similar to AA sequence:SwissProt:P46712.1;locus_tag=A3216_08325;product=phosphoglycerate kinase;protein_id=OAX71053.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 31822 32841 . - . ID=gene-A3216_08330;Name=A3216_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08330 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 31822 32841 . - 0 ID=cds-OAX71054.1;Parent=gene-A3216_08330;Dbxref=NCBI_GP:OAX71054.1;Name=OAX71054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385248.1;locus_tag=A3216_08330;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OAX71054.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 33304 34119 . + . ID=gene-A3216_08335;Name=A3216_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08335 GCA_001648835.1|LVXE01000026.1 Protein Homology CDS 33304 34119 . + 0 ID=cds-OAX71058.1;Parent=gene-A3216_08335;Dbxref=NCBI_GP:OAX71058.1;Name=OAX71058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907805.1;locus_tag=A3216_08335;product=hypothetical protein;protein_id=OAX71058.1;transl_table=11 GCA_001648835.1|LVXE01000026.1 Genbank gene 34510 34740 . - . ID=gene-A3216_08340;Name=A3216_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08340 GCA_001648835.1|LVXE01000026.1 GeneMarkS+ CDS 34510 34740 . - 0 ID=cds-OAX71055.1;Parent=gene-A3216_08340;Dbxref=NCBI_GP:OAX71055.1;Name=OAX71055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08340;product=hypothetical protein;protein_id=OAX71055.1;transl_table=11 ##sequence-region LVXE01000027.1 1 36126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000027.1 Genbank region 1 36126 . + . ID=LVXE01000027.1:1..36126;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000027.1 Genbank gene 78 341 . - . ID=gene-A3216_08345;Name=A3216_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08345 GCA_001648835.1|LVXE01000027.1 GeneMarkS+ CDS 78 341 . - 0 ID=cds-OAX71003.1;Parent=gene-A3216_08345;Dbxref=NCBI_GP:OAX71003.1;Name=OAX71003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08345;product=hypothetical protein;protein_id=OAX71003.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 539 763 . + . ID=gene-A3216_08350;Name=A3216_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08350 GCA_001648835.1|LVXE01000027.1 GeneMarkS+ CDS 539 763 . + 0 ID=cds-OAX71004.1;Parent=gene-A3216_08350;Dbxref=NCBI_GP:OAX71004.1;Name=OAX71004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08350;product=hypothetical protein;protein_id=OAX71004.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank pseudogene 842 1543 . + . ID=gene-A3216_08355;Name=A3216_08355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08355;pseudo=true GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 842 1543 . + 0 ID=cds-A3216_08355;Parent=gene-A3216_08355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874951.1;locus_tag=A3216_08355;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 1544 2638 . - . ID=gene-A3216_08360;Name=A3216_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08360 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 1544 2638 . - 0 ID=cds-OAX71026.1;Parent=gene-A3216_08360;Dbxref=NCBI_GP:OAX71026.1;Name=OAX71026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908506.1;locus_tag=A3216_08360;product=pyrrolo-quinoline quinone;protein_id=OAX71026.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 3078 3815 . + . ID=gene-A3216_08365;Name=A3216_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08365 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 3078 3815 . + 0 ID=cds-OAX71005.1;Parent=gene-A3216_08365;Dbxref=NCBI_GP:OAX71005.1;Name=OAX71005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908505.1;locus_tag=A3216_08365;product=acetyltransferase;protein_id=OAX71005.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank pseudogene 4554 5477 . - . ID=gene-A3216_08370;Name=A3216_08370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08370;pseudo=true GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 4554 5477 . - 0 ID=cds-A3216_08370;Parent=gene-A3216_08370;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014213942.1;locus_tag=A3216_08370;product=fumarylacetoacetase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 6798 7001 . + . ID=gene-A3216_08375;Name=A3216_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08375 GCA_001648835.1|LVXE01000027.1 GeneMarkS+ CDS 6798 7001 . + 0 ID=cds-OAX71006.1;Parent=gene-A3216_08375;Dbxref=NCBI_GP:OAX71006.1;Name=OAX71006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08375;product=hypothetical protein;protein_id=OAX71006.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 7093 7386 . + . ID=gene-A3216_08380;Name=A3216_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08380 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 7093 7386 . + 0 ID=cds-OAX71007.1;Parent=gene-A3216_08380;Dbxref=NCBI_GP:OAX71007.1;Name=OAX71007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908504.1;locus_tag=A3216_08380;product=hypothetical protein;protein_id=OAX71007.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 7774 8112 . + . ID=gene-A3216_08385;Name=A3216_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08385 GCA_001648835.1|LVXE01000027.1 GeneMarkS+ CDS 7774 8112 . + 0 ID=cds-OAX71008.1;Parent=gene-A3216_08385;Dbxref=NCBI_GP:OAX71008.1;Name=OAX71008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08385;product=hypothetical protein;protein_id=OAX71008.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 8208 8582 . - . ID=gene-A3216_08390;Name=A3216_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08390 GCA_001648835.1|LVXE01000027.1 GeneMarkS+ CDS 8208 8582 . - 0 ID=cds-OAX71009.1;Parent=gene-A3216_08390;Dbxref=NCBI_GP:OAX71009.1;Name=OAX71009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08390;product=hypothetical protein;protein_id=OAX71009.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 8882 10126 . - . ID=gene-A3216_08395;Name=A3216_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08395 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 8882 10126 . - 0 ID=cds-OAX71010.1;Parent=gene-A3216_08395;Dbxref=NCBI_GP:OAX71010.1;Name=OAX71010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712115.1;locus_tag=A3216_08395;product=glycogen synthase;protein_id=OAX71010.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 10224 11792 . - . ID=gene-A3216_08400;Name=A3216_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08400 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 10224 11792 . - 0 ID=cds-OAX71011.1;Parent=gene-A3216_08400;Dbxref=NCBI_GP:OAX71011.1;Name=OAX71011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908502.1;locus_tag=A3216_08400;product=1%2C4-alpha-glucan branching protein;protein_id=OAX71011.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 11789 12631 . - . ID=gene-A3216_08405;Name=A3216_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08405 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 11789 12631 . - 0 ID=cds-OAX71012.1;Parent=gene-A3216_08405;Dbxref=NCBI_GP:OAX71012.1;Name=OAX71012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908501.1;locus_tag=A3216_08405;product=SAM-dependent methyltransferase;protein_id=OAX71012.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 12859 13659 . + . ID=gene-A3216_08410;Name=A3216_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08410 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 12859 13659 . + 0 ID=cds-OAX71013.1;Parent=gene-A3216_08410;Dbxref=NCBI_GP:OAX71013.1;Name=OAX71013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014214156.1;locus_tag=A3216_08410;product=electron transfer flavoprotein subunit beta;protein_id=OAX71013.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank pseudogene 13708 14644 . + . ID=gene-A3216_08415;Name=A3216_08415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08415;pseudo=true GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 13708 14644 . + 0 ID=cds-A3216_08415;Parent=gene-A3216_08415;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955847.1;locus_tag=A3216_08415;product=electron transfer flavoprotein subunit alpha;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank pseudogene 14874 15741 . + . ID=gene-A3216_08420;Name=A3216_08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08420;pseudo=true GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 14874 15741 . + 0 ID=cds-A3216_08420;Parent=gene-A3216_08420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008259080.1;locus_tag=A3216_08420;product=phosphohistidine phosphatase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 16640 17830 . + . ID=gene-A3216_08425;Name=A3216_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08425 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 16640 17830 . + 0 ID=cds-OAX71014.1;Parent=gene-A3216_08425;Dbxref=NCBI_GP:OAX71014.1;Name=OAX71014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874982.1;locus_tag=A3216_08425;product=cysteine desulfurase;protein_id=OAX71014.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 17827 18903 . + . ID=gene-A3216_08430;Name=A3216_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08430 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 17827 18903 . + 0 ID=cds-OAX71015.1;Parent=gene-A3216_08430;Dbxref=NCBI_GP:OAX71015.1;Name=OAX71015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33099.1;locus_tag=A3216_08430;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=OAX71015.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 19819 20832 . + . ID=gene-A3216_08435;Name=A3216_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08435 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 19819 20832 . + 0 ID=cds-OAX71016.1;Parent=gene-A3216_08435;Dbxref=NCBI_GP:OAX71016.1;Name=OAX71016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908496.1;locus_tag=A3216_08435;product=methionine synthase;protein_id=OAX71016.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 20891 22975 . + . ID=gene-A3216_08440;Name=A3216_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08440 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 20891 22975 . + 0 ID=cds-OAX71017.1;Parent=gene-A3216_08440;Dbxref=NCBI_GP:OAX71017.1;Name=OAX71017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33102.1;locus_tag=A3216_08440;product=DNA ligase (NAD(+)) LigA;protein_id=OAX71017.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 22978 23643 . - . ID=gene-A3216_08445;Name=A3216_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08445 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 22978 23643 . - 0 ID=cds-OAX71027.1;Parent=gene-A3216_08445;Dbxref=NCBI_GP:OAX71027.1;Name=OAX71027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003415259.1;locus_tag=A3216_08445;product=amino acid-binding protein;protein_id=OAX71027.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 23813 24112 . + . ID=gene-A3216_08450;Name=A3216_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08450 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 23813 24112 . + 0 ID=cds-OAX71018.1;Parent=gene-A3216_08450;Dbxref=NCBI_GP:OAX71018.1;Name=OAX71018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0PPX3.1;locus_tag=A3216_08450;product=asparaginyl/glutamyl-tRNA amidotransferase subunit C;protein_id=OAX71018.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 24109 25602 . + . ID=gene-A3216_08455;Name=A3216_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08455 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 24109 25602 . + 0 ID=cds-OAX71019.1;Parent=gene-A3216_08455;Dbxref=NCBI_GP:OAX71019.1;Name=OAX71019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33105.1;locus_tag=A3216_08455;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=OAX71019.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 25690 26721 . + . ID=gene-A3216_08460;Name=A3216_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08460 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 25690 26721 . + 0 ID=cds-OAX71020.1;Parent=gene-A3216_08460;Dbxref=NCBI_GP:OAX71020.1;Name=OAX71020.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245700.1;locus_tag=A3216_08460;product=6-phosphofructokinase;protein_id=OAX71020.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 27070 28599 . + . ID=gene-A3216_08465;Name=A3216_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08465 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 27070 28599 . + 0 ID=cds-OAX71021.1;Parent=gene-A3216_08465;Dbxref=NCBI_GP:OAX71021.1;Name=OAX71021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015291120.1;locus_tag=A3216_08465;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=OAX71021.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 29541 30659 . - . ID=gene-A3216_08470;Name=A3216_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08470 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 29541 30659 . - 0 ID=cds-OAX71022.1;Parent=gene-A3216_08470;Dbxref=NCBI_GP:OAX71022.1;Name=OAX71022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908489.1;locus_tag=A3216_08470;product=hypothetical protein;protein_id=OAX71022.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 30902 31735 . + . ID=gene-A3216_08475;Name=A3216_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08475 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 30902 31735 . + 0 ID=cds-OAX71023.1;Parent=gene-A3216_08475;Dbxref=NCBI_GP:OAX71023.1;Name=OAX71023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908488.1;locus_tag=A3216_08475;product=hypothetical protein;protein_id=OAX71023.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 32507 34384 . + . ID=gene-A3216_08480;Name=A3216_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08480 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 32507 34384 . + 0 ID=cds-OAX71024.1;Parent=gene-A3216_08480;Dbxref=NCBI_GP:OAX71024.1;Name=OAX71024.1;Note=acetolactate synthase large subunit%3B catalyzes the formation of 2-acetolactate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33112.1;locus_tag=A3216_08480;product=acetolactate synthase large subunit;protein_id=OAX71024.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 34436 34945 . + . ID=gene-A3216_08485;Name=A3216_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08485 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 34436 34945 . + 0 ID=cds-OAX71025.1;Parent=gene-A3216_08485;Dbxref=NCBI_GP:OAX71025.1;Name=OAX71025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33113.1;locus_tag=A3216_08485;product=acetolactate synthase small subunit;protein_id=OAX71025.1;transl_table=11 GCA_001648835.1|LVXE01000027.1 Genbank gene 34998 35999 . + . ID=gene-A3216_08490;Name=A3216_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08490 GCA_001648835.1|LVXE01000027.1 Protein Homology CDS 34998 35999 . + 0 ID=cds-OAX71028.1;Parent=gene-A3216_08490;Dbxref=NCBI_GP:OAX71028.1;Name=OAX71028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019930114.1;locus_tag=A3216_08490;product=ketol-acid reductoisomerase;protein_id=OAX71028.1;transl_table=11 ##sequence-region LVXE01000028.1 1 35856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000028.1 Genbank region 1 35856 . + . ID=LVXE01000028.1:1..35856;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000028.1 Genbank gene 1821 2165 . - . ID=gene-A3216_08495;Name=A3216_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08495 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 1821 2165 . - 0 ID=cds-OAX70977.1;Parent=gene-A3216_08495;Dbxref=NCBI_GP:OAX70977.1;Name=OAX70977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908612.1;locus_tag=A3216_08495;product=hypothetical protein;protein_id=OAX70977.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 2756 3097 . + . ID=gene-A3216_08500;Name=A3216_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08500 GCA_001648835.1|LVXE01000028.1 GeneMarkS+ CDS 2756 3097 . + 0 ID=cds-OAX70978.1;Parent=gene-A3216_08500;Dbxref=NCBI_GP:OAX70978.1;Name=OAX70978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08500;product=hypothetical protein;protein_id=OAX70978.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 3528 4240 . - . ID=gene-A3216_08505;Name=A3216_08505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08505;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 3528 4240 . - 0 ID=cds-A3216_08505;Parent=gene-A3216_08505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009979156.1;locus_tag=A3216_08505;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 4396 5112 . - . ID=gene-A3216_08510;Name=A3216_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08510 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 4396 5112 . - 0 ID=cds-OAX70979.1;Parent=gene-A3216_08510;Dbxref=NCBI_GP:OAX70979.1;Name=OAX70979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908611.1;locus_tag=A3216_08510;product=MBL fold metallo-hydrolase;protein_id=OAX70979.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 5265 5480 . + . ID=gene-A3216_08515;Name=A3216_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08515 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 5265 5480 . + 0 ID=cds-OAX70980.1;Parent=gene-A3216_08515;Dbxref=NCBI_GP:OAX70980.1;Name=OAX70980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908610.1;locus_tag=A3216_08515;product=hypothetical protein;protein_id=OAX70980.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 5634 5706 . + . ID=gene-A3216_08520;Name=A3216_08520;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08520 GCA_001648835.1|LVXE01000028.1 tRNAscan-SE tRNA 5634 5706 . + . ID=rna-A3216_08520;Parent=gene-A3216_08520;anticodon=(pos:5667..5669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08520;product=tRNA-Thr GCA_001648835.1|LVXE01000028.1 tRNAscan-SE exon 5634 5706 . + . ID=exon-A3216_08520-1;Parent=rna-A3216_08520;anticodon=(pos:5667..5669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08520;product=tRNA-Thr GCA_001648835.1|LVXE01000028.1 Genbank gene 5760 5836 . + . ID=gene-A3216_08525;Name=A3216_08525;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08525 GCA_001648835.1|LVXE01000028.1 tRNAscan-SE tRNA 5760 5836 . + . ID=rna-A3216_08525;Parent=gene-A3216_08525;anticodon=(pos:5794..5796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08525;product=tRNA-Met GCA_001648835.1|LVXE01000028.1 tRNAscan-SE exon 5760 5836 . + . ID=exon-A3216_08525-1;Parent=rna-A3216_08525;anticodon=(pos:5794..5796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08525;product=tRNA-Met GCA_001648835.1|LVXE01000028.1 Genbank gene 5880 6047 . + . ID=gene-A3216_08530;Name=A3216_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08530 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 5880 6047 . + 0 ID=cds-OAX70981.1;Parent=gene-A3216_08530;Dbxref=NCBI_GP:OAX70981.1;Name=OAX70981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018598675.1;locus_tag=A3216_08530;product=50S ribosomal protein L33;protein_id=OAX70981.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 6094 6573 . + . ID=gene-A3216_08535;Name=A3216_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08535 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 6094 6573 . + 0 ID=cds-OAX70982.1;Parent=gene-A3216_08535;Dbxref=NCBI_GP:OAX70982.1;Name=OAX70982.1;Note=functions as a heterodimer along with HadB in fatty acid biosynthesis%3B fatty acid synthase type II%3B FAS-II;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBJ6.1;locus_tag=A3216_08535;product=3-hydroxyacyl-ACP dehydratase;protein_id=OAX70982.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 6560 6988 . + . ID=gene-A3216_08540;Name=A3216_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08540 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 6560 6988 . + 0 ID=cds-OAX70983.1;Parent=gene-A3216_08540;Dbxref=NCBI_GP:OAX70983.1;Name=OAX70983.1;Note=functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis%3B fatty acid synthase type II%3B FAS-II;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010950426.1;locus_tag=A3216_08540;product=3-hydroxyacyl-ACP dehydratase;protein_id=OAX70983.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 6992 7492 . + . ID=gene-A3216_08545;Name=A3216_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08545 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 6992 7492 . + 0 ID=cds-OAX70984.1;Parent=gene-A3216_08545;Dbxref=NCBI_GP:OAX70984.1;Name=OAX70984.1;Note=functions as a heterodimer along with HadB in fatty acid biosynthesis%3B fatty acid synthase type II%3B FAS-II;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008260923.1;locus_tag=A3216_08545;product=3-hydroxyacyl-ACP dehydratase;protein_id=OAX70984.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 7663 7735 . + . ID=gene-A3216_08550;Name=A3216_08550;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08550 GCA_001648835.1|LVXE01000028.1 tRNAscan-SE tRNA 7663 7735 . + . ID=rna-A3216_08550;Parent=gene-A3216_08550;anticodon=(pos:7696..7698);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08550;product=tRNA-Trp GCA_001648835.1|LVXE01000028.1 tRNAscan-SE exon 7663 7735 . + . ID=exon-A3216_08550-1;Parent=rna-A3216_08550;anticodon=(pos:7696..7698);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08550;product=tRNA-Trp GCA_001648835.1|LVXE01000028.1 Genbank gene 7828 8268 . + . ID=gene-A3216_08555;Name=A3216_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08555 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 7828 8268 . + 0 ID=cds-OAX70985.1;Parent=gene-A3216_08555;Dbxref=NCBI_GP:OAX70985.1;Name=OAX70985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBJ9.1;locus_tag=A3216_08555;product=preprotein translocase subunit SecE;protein_id=OAX70985.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 8301 9032 . + . ID=gene-A3216_08560;Name=A3216_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08560 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 8301 9032 . + 0 ID=cds-OAX70986.1;Parent=gene-A3216_08560;Dbxref=NCBI_GP:OAX70986.1;Name=OAX70986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788608.1;locus_tag=A3216_08560;product=transcription termination/antitermination protein NusG;protein_id=OAX70986.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 9060 9488 . + . ID=gene-A3216_08565;Name=A3216_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08565 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 9060 9488 . + 0 ID=cds-OAX70987.1;Parent=gene-A3216_08565;Dbxref=NCBI_GP:OAX70987.1;Name=OAX70987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013827605.1;locus_tag=A3216_08565;product=50S ribosomal protein L11;protein_id=OAX70987.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 9620 10327 . + . ID=gene-A3216_08570;Name=A3216_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08570 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 9620 10327 . + 0 ID=cds-OAX70988.1;Parent=gene-A3216_08570;Dbxref=NCBI_GP:OAX70988.1;Name=OAX70988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908602.1;locus_tag=A3216_08570;product=50S ribosomal protein L1;protein_id=OAX70988.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 10400 10612 . - . ID=gene-A3216_08575;Name=A3216_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08575 GCA_001648835.1|LVXE01000028.1 GeneMarkS+ CDS 10400 10612 . - 0 ID=cds-OAX70989.1;Parent=gene-A3216_08575;Dbxref=NCBI_GP:OAX70989.1;Name=OAX70989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08575;product=hypothetical protein;protein_id=OAX70989.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 10781 11083 . - . ID=gene-A3216_08580;Name=A3216_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08580 GCA_001648835.1|LVXE01000028.1 GeneMarkS+ CDS 10781 11083 . - 0 ID=cds-OAX70990.1;Parent=gene-A3216_08580;Dbxref=NCBI_GP:OAX70990.1;Name=OAX70990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08580;product=hypothetical protein;protein_id=OAX70990.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 12109 13005 . - . ID=gene-A3216_08585;Name=A3216_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08585 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 12109 13005 . - 0 ID=cds-OAX71002.1;Parent=gene-A3216_08585;Dbxref=NCBI_GP:OAX71002.1;Name=OAX71002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908601.1;locus_tag=A3216_08585;product=SAM-dependent methyltransferase;protein_id=OAX71002.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 13118 13985 . - . ID=gene-A3216_08590;Name=A3216_08590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08590;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 13118 13985 . - 0 ID=cds-A3216_08590;Parent=gene-A3216_08590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005101093.1;locus_tag=A3216_08590;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 14162 14975 . - . ID=gene-A3216_08595;Name=A3216_08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08595;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 14162 14975 . - 0 ID=cds-A3216_08595;Parent=gene-A3216_08595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015626799.1;locus_tag=A3216_08595;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 15170 16030 . - . ID=gene-A3216_08600;Name=A3216_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08600 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 15170 16030 . - 0 ID=cds-OAX70991.1;Parent=gene-A3216_08600;Dbxref=NCBI_GP:OAX70991.1;Name=OAX70991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908600.1;locus_tag=A3216_08600;product=SAM-dependent methyltransferase;protein_id=OAX70991.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 16088 17002 . - . ID=gene-A3216_08605;Name=A3216_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08605 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 16088 17002 . - 0 ID=cds-OAX70992.1;Parent=gene-A3216_08605;Dbxref=NCBI_GP:OAX70992.1;Name=OAX70992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908599.1;locus_tag=A3216_08605;product=hydrolase;protein_id=OAX70992.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 17002 18348 . - . ID=gene-A3216_08610;Name=A3216_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08610 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 17002 18348 . - 0 ID=cds-OAX70993.1;Parent=gene-A3216_08610;Dbxref=NCBI_GP:OAX70993.1;Name=OAX70993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908598.1;locus_tag=A3216_08610;product=hypothetical protein;protein_id=OAX70993.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 19240 19773 . + . ID=gene-A3216_08615;Name=A3216_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08615 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 19240 19773 . + 0 ID=cds-OAX70994.1;Parent=gene-A3216_08615;Dbxref=NCBI_GP:OAX70994.1;Name=OAX70994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBK7.1;locus_tag=A3216_08615;product=50S ribosomal protein L10;protein_id=OAX70994.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 19809 20201 . + . ID=gene-A3216_08620;Name=A3216_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08620 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 19809 20201 . + 0 ID=cds-OAX70995.1;Parent=gene-A3216_08620;Dbxref=NCBI_GP:OAX70995.1;Name=OAX70995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013988758.1;locus_tag=A3216_08620;product=50S ribosomal protein L7/L12;protein_id=OAX70995.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 20259 20775 . - . ID=gene-A3216_08625;Name=A3216_08625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08625;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 20259 20775 . - 0 ID=cds-A3216_08625;Parent=gene-A3216_08625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383309.1;locus_tag=A3216_08625;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 20931 22201 . + . ID=gene-A3216_08630;Name=A3216_08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08630;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 20931 22201 . + 0 ID=cds-A3216_08630;Parent=gene-A3216_08630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788592.1;locus_tag=A3216_08630;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 22366 23376 . + . ID=gene-A3216_08635;Name=A3216_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08635 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 22366 23376 . + 0 ID=cds-OAX70996.1;Parent=gene-A3216_08635;Dbxref=NCBI_GP:OAX70996.1;Name=OAX70996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873552.1;locus_tag=A3216_08635;product=ABC transporter ATP-binding protein;protein_id=OAX70996.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 23924 27367 . + . ID=gene-A3216_08640;Name=A3216_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08640 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 23924 27367 . + 0 ID=cds-OAX70997.1;Parent=gene-A3216_08640;Dbxref=NCBI_GP:OAX70997.1;Name=OAX70997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007767820.1;locus_tag=A3216_08640;product=DNA-directed RNA polymerase subunit beta;protein_id=OAX70997.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 27416 31366 . + . ID=gene-A3216_08645;Name=A3216_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08645 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 27416 31366 . + 0 ID=cds-OAX70998.1;Parent=gene-A3216_08645;Dbxref=NCBI_GP:OAX70998.1;Name=OAX70998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73SE3.1;locus_tag=A3216_08645;product=DNA-directed RNA polymerase subunit beta';protein_id=OAX70998.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 31691 32449 . + . ID=gene-A3216_08650;Name=A3216_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08650 GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 31691 32449 . + 0 ID=cds-OAX70999.1;Parent=gene-A3216_08650;Dbxref=NCBI_GP:OAX70999.1;Name=OAX70999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P30770.1;locus_tag=A3216_08650;product=deoxyribonuclease IV;protein_id=OAX70999.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 33525 33749 . + . ID=gene-A3216_08655;Name=A3216_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08655 GCA_001648835.1|LVXE01000028.1 GeneMarkS+ CDS 33525 33749 . + 0 ID=cds-OAX71000.1;Parent=gene-A3216_08655;Dbxref=NCBI_GP:OAX71000.1;Name=OAX71000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08655;product=hypothetical protein;protein_id=OAX71000.1;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank pseudogene 34080 35050 . + . ID=gene-A3216_08660;Name=A3216_08660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08660;pseudo=true GCA_001648835.1|LVXE01000028.1 Protein Homology CDS 34080 35050 . + 0 ID=cds-A3216_08660;Parent=gene-A3216_08660;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014209190.1;locus_tag=A3216_08660;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000028.1 Genbank gene 35372 35620 . + . ID=gene-A3216_08665;Name=A3216_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08665 GCA_001648835.1|LVXE01000028.1 GeneMarkS+ CDS 35372 35620 . + 0 ID=cds-OAX71001.1;Parent=gene-A3216_08665;Dbxref=NCBI_GP:OAX71001.1;Name=OAX71001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08665;product=hypothetical protein;protein_id=OAX71001.1;transl_table=11 ##sequence-region LVXE01000029.1 1 35384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000029.1 Genbank region 1 35384 . + . ID=LVXE01000029.1:1..35384;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000029.1 Genbank gene 2857 3093 . - . ID=gene-A3216_08670;Name=A3216_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08670 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 2857 3093 . - 0 ID=cds-OAX70955.1;Parent=gene-A3216_08670;Dbxref=NCBI_GP:OAX70955.1;Name=OAX70955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08670;product=hypothetical protein;protein_id=OAX70955.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 4535 4813 . + . ID=gene-A3216_08675;Name=A3216_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08675 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 4535 4813 . + 0 ID=cds-OAX70956.1;Parent=gene-A3216_08675;Dbxref=NCBI_GP:OAX70956.1;Name=OAX70956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08675;product=hypothetical protein;protein_id=OAX70956.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 5057 5694 . + . ID=gene-A3216_08680;Name=A3216_08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08680;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 5057 5694 . + 0 ID=cds-A3216_08680;Parent=gene-A3216_08680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003874919.1;locus_tag=A3216_08680;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 5774 7944 . + . ID=gene-A3216_08685;Name=A3216_08685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08685;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 5774 7944 . + 0 ID=cds-A3216_08685;Parent=gene-A3216_08685;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393455.1;locus_tag=A3216_08685;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 8877 9068 . + . ID=gene-A3216_08690;Name=A3216_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08690 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 8877 9068 . + 0 ID=cds-OAX70957.1;Parent=gene-A3216_08690;Dbxref=NCBI_GP:OAX70957.1;Name=OAX70957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08690;product=hypothetical protein;protein_id=OAX70957.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 9356 9607 . + . ID=gene-A3216_08695;Name=A3216_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08695 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 9356 9607 . + 0 ID=cds-OAX70958.1;Parent=gene-A3216_08695;Dbxref=NCBI_GP:OAX70958.1;Name=OAX70958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08695;product=hypothetical protein;protein_id=OAX70958.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 9843 10205 . - . ID=gene-A3216_08700;Name=A3216_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08700 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 9843 10205 . - 0 ID=cds-OAX70959.1;Parent=gene-A3216_08700;Dbxref=NCBI_GP:OAX70959.1;Name=OAX70959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08700;product=hypothetical protein;protein_id=OAX70959.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 10739 10951 . + . ID=gene-A3216_08705;Name=A3216_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08705 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 10739 10951 . + 0 ID=cds-OAX70960.1;Parent=gene-A3216_08705;Dbxref=NCBI_GP:OAX70960.1;Name=OAX70960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08705;product=hypothetical protein;protein_id=OAX70960.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 11444 12862 . - . ID=gene-A3216_08710;Name=A3216_08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08710;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 11444 12862 . - 0 ID=cds-A3216_08710;Parent=gene-A3216_08710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011559208.1;locus_tag=A3216_08710;product=cytochrome P450;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 13700 14638 . + . ID=gene-A3216_08715;Name=A3216_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08715 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 13700 14638 . + 0 ID=cds-OAX70961.1;Parent=gene-A3216_08715;Dbxref=NCBI_GP:OAX70961.1;Name=OAX70961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908519.1;locus_tag=A3216_08715;product=short chain dehydrogenase;protein_id=OAX70961.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 14720 15668 . - . ID=gene-A3216_08720;Name=A3216_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08720;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 14720 15668 . - 0 ID=cds-A3216_08720;Parent=gene-A3216_08720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978326.1;locus_tag=A3216_08720;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 15705 16300 . - . ID=gene-A3216_08725;Name=A3216_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08725;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 15705 16300 . - 0 ID=cds-A3216_08725;Parent=gene-A3216_08725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014214204.1;locus_tag=A3216_08725;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 16515 16724 . + . ID=gene-A3216_08730;Name=A3216_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08730 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 16515 16724 . + 0 ID=cds-OAX70962.1;Parent=gene-A3216_08730;Dbxref=NCBI_GP:OAX70962.1;Name=OAX70962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08730;product=hypothetical protein;protein_id=OAX70962.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 16778 17050 . + . ID=gene-A3216_08735;Name=A3216_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08735 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 16778 17050 . + 0 ID=cds-OAX70963.1;Parent=gene-A3216_08735;Dbxref=NCBI_GP:OAX70963.1;Name=OAX70963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08735;product=hypothetical protein;protein_id=OAX70963.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 17445 17684 . + . ID=gene-A3216_08740;Name=A3216_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08740 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 17445 17684 . + 0 ID=cds-OAX70964.1;Parent=gene-A3216_08740;Dbxref=NCBI_GP:OAX70964.1;Name=OAX70964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019738074.1;locus_tag=A3216_08740;product=NrdH-redoxin;protein_id=OAX70964.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 17689 18129 . + . ID=gene-A3216_08745;Name=A3216_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08745 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 17689 18129 . + 0 ID=cds-OAX70965.1;Parent=gene-A3216_08745;Dbxref=NCBI_GP:OAX70965.1;Name=OAX70965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003893666.1;locus_tag=A3216_08745;product=ribonucleotide reductase assembly protein NrdI;protein_id=OAX70965.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 18130 20295 . + . ID=gene-A3216_08750;Name=A3216_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08750 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 18130 20295 . + 0 ID=cds-OAX70966.1;Parent=gene-A3216_08750;Dbxref=NCBI_GP:OAX70966.1;Name=OAX70966.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815054.1;locus_tag=A3216_08750;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=OAX70966.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 20342 21169 . + . ID=gene-A3216_08755;Name=A3216_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08755 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 20342 21169 . + 0 ID=cds-OAX70967.1;Parent=gene-A3216_08755;Dbxref=NCBI_GP:OAX70967.1;Name=OAX70967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908515.1;locus_tag=A3216_08755;product=AsnC family transcriptional regulator;protein_id=OAX70967.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 21360 22893 . + . ID=gene-A3216_08760;Name=A3216_08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08760;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 21360 22893 . + 0 ID=cds-A3216_08760;Parent=gene-A3216_08760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003922183.1;locus_tag=A3216_08760;product=4-hydroxyacetophenone monooxygenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 23044 24006 . + . ID=gene-A3216_08765;Name=A3216_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08765 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 23044 24006 . + 0 ID=cds-OAX70968.1;Parent=gene-A3216_08765;Dbxref=NCBI_GP:OAX70968.1;Name=OAX70968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245653.1;locus_tag=A3216_08765;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=OAX70968.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 25615 26655 . - . ID=gene-A3216_08770;Name=A3216_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08770 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 25615 26655 . - 0 ID=cds-OAX70969.1;Parent=gene-A3216_08770;Dbxref=NCBI_GP:OAX70969.1;Name=OAX70969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978314.1;locus_tag=A3216_08770;product=alcohol dehydrogenase;protein_id=OAX70969.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 26963 28057 . - . ID=gene-A3216_08775;Name=A3216_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08775 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 26963 28057 . - 0 ID=cds-OAX70974.1;Parent=gene-A3216_08775;Dbxref=NCBI_GP:OAX70974.1;Name=OAX70974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908512.1;locus_tag=A3216_08775;product=Fe3+-citrate ABC transporter substrate-binding protein;protein_id=OAX70974.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 28272 29996 . + . ID=gene-A3216_08780;Name=A3216_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08780 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 28272 29996 . + 0 ID=cds-OAX70975.1;Parent=gene-A3216_08780;Dbxref=NCBI_GP:OAX70975.1;Name=OAX70975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBQ5.1;locus_tag=A3216_08780;product=cytochrome c oxidase subunit I;protein_id=OAX70975.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 30036 31271 . + . ID=gene-A3216_08785;Name=A3216_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08785 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 30036 31271 . + 0 ID=cds-OAX70970.1;Parent=gene-A3216_08785;Dbxref=NCBI_GP:OAX70970.1;Name=OAX70970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009978312.1;locus_tag=A3216_08785;product=phosphoserine phosphatase SerB;protein_id=OAX70970.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 31320 32198 . + . ID=gene-A3216_08790;Name=A3216_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08790 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 31320 32198 . + 0 ID=cds-OAX70976.1;Parent=gene-A3216_08790;Dbxref=NCBI_GP:OAX70976.1;Name=OAX70976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712129.1;locus_tag=A3216_08790;product=iron ABC transporter ATP-binding protein;protein_id=OAX70976.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank pseudogene 32195 32999 . + . ID=gene-A3216_08795;Name=A3216_08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08795;pseudo=true GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 32195 32999 . + 0 ID=cds-A3216_08795;Parent=gene-A3216_08795;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015294127.1;locus_tag=A3216_08795;product=NUDIX hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 33070 33828 . + . ID=gene-A3216_08800;Name=A3216_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08800 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 33070 33828 . + 0 ID=cds-OAX70971.1;Parent=gene-A3216_08800;Dbxref=NCBI_GP:OAX70971.1;Name=OAX70971.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908508.1;locus_tag=A3216_08800;product=enoyl-CoA hydratase;protein_id=OAX70971.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 33861 34844 . + . ID=gene-A3216_08805;Name=A3216_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08805 GCA_001648835.1|LVXE01000029.1 Protein Homology CDS 33861 34844 . + 0 ID=cds-OAX70972.1;Parent=gene-A3216_08805;Dbxref=NCBI_GP:OAX70972.1;Name=OAX70972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908507.1;locus_tag=A3216_08805;product=methyltransferase type 11;protein_id=OAX70972.1;transl_table=11 GCA_001648835.1|LVXE01000029.1 Genbank gene 34897 35106 . + . ID=gene-A3216_08810;Name=A3216_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08810 GCA_001648835.1|LVXE01000029.1 GeneMarkS+ CDS 34897 35106 . + 0 ID=cds-OAX70973.1;Parent=gene-A3216_08810;Dbxref=NCBI_GP:OAX70973.1;Name=OAX70973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08810;product=hypothetical protein;protein_id=OAX70973.1;transl_table=11 ##sequence-region LVXE01000003.1 1 213564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000003.1 Genbank region 1 213564 . + . ID=LVXE01000003.1:1..213564;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000003.1 Genbank gene 346 2262 . - . ID=gene-A3216_01740;Name=A3216_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01740 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 346 2262 . - 0 ID=cds-OAX71957.1;Parent=gene-A3216_01740;Dbxref=NCBI_GP:OAX71957.1;Name=OAX71957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908710.1;locus_tag=A3216_01740;product=multidrug ABC transporter ATP-binding protein;protein_id=OAX71957.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 2356 4002 . + . ID=gene-A3216_01745;Name=A3216_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01745 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 2356 4002 . + 0 ID=cds-OAX71958.1;Parent=gene-A3216_01745;Dbxref=NCBI_GP:OAX71958.1;Name=OAX71958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908709.1;locus_tag=A3216_01745;product=hypothetical protein;protein_id=OAX71958.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 4110 6446 . + . ID=gene-A3216_01750;Name=A3216_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01750 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 4110 6446 . + 0 ID=cds-OAX71959.1;Parent=gene-A3216_01750;Dbxref=NCBI_GP:OAX71959.1;Name=OAX71959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170005.1;locus_tag=A3216_01750;product=accessory Sec system translocase SecA2;protein_id=OAX71959.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 6508 7128 . + . ID=gene-A3216_01755;Name=A3216_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01755 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 6508 7128 . + 0 ID=cds-OAX71960.1;Parent=gene-A3216_01755;Dbxref=NCBI_GP:OAX71960.1;Name=OAX71960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908707.1;locus_tag=A3216_01755;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OAX71960.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 8122 8467 . + . ID=gene-A3216_01760;Name=A3216_01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01760;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 8122 8467 . + 0 ID=cds-A3216_01760;Parent=gene-A3216_01760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011780345.1;locus_tag=A3216_01760;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 8612 9324 . + . ID=gene-A3216_01765;Name=A3216_01765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01765;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 8612 9324 . + 0 ID=cds-A3216_01765;Parent=gene-A3216_01765;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942128.1;locus_tag=A3216_01765;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 9349 9747 . + . ID=gene-A3216_01770;Name=A3216_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01770 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 9349 9747 . + 0 ID=cds-OAX71961.1;Parent=gene-A3216_01770;Dbxref=NCBI_GP:OAX71961.1;Name=OAX71961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73ZR2.1;locus_tag=A3216_01770;product=glycine cleavage system protein H;protein_id=OAX71961.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 9991 10479 . + . ID=gene-A3216_01775;Name=A3216_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01775 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 9991 10479 . + 0 ID=cds-OAX72085.1;Parent=gene-A3216_01775;Dbxref=NCBI_GP:OAX72085.1;Name=OAX72085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908705.1;locus_tag=A3216_01775;product=peptide-binding protein;protein_id=OAX72085.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 10476 11231 . + . ID=gene-A3216_01780;Name=A3216_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01780 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 10476 11231 . + 0 ID=cds-OAX71962.1;Parent=gene-A3216_01780;Dbxref=NCBI_GP:OAX71962.1;Name=OAX71962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012394419.1;locus_tag=A3216_01780;product=MerR family transcriptional regulator;protein_id=OAX71962.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 11348 11842 . + . ID=gene-A3216_01785;Name=A3216_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01785 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 11348 11842 . + 0 ID=cds-OAX71963.1;Parent=gene-A3216_01785;Dbxref=NCBI_GP:OAX71963.1;Name=OAX71963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50604.2;locus_tag=A3216_01785;product=hypothetical protein;protein_id=OAX71963.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 12120 12770 . + . ID=gene-A3216_01790;Name=A3216_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01790 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 12120 12770 . + 0 ID=cds-OAX71964.1;Parent=gene-A3216_01790;Dbxref=NCBI_GP:OAX71964.1;Name=OAX71964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771372.1;locus_tag=A3216_01790;product=transcriptional regulator;protein_id=OAX71964.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 12938 15796 . + . ID=gene-A3216_01795;Name=A3216_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01795 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 12938 15796 . + 0 ID=cds-OAX71965.1;Parent=gene-A3216_01795;Dbxref=NCBI_GP:OAX71965.1;Name=OAX71965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32915.1;locus_tag=A3216_01795;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=OAX71965.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 16374 16562 . - . ID=gene-A3216_01800;Name=A3216_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01800 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 16374 16562 . - 0 ID=cds-OAX71966.1;Parent=gene-A3216_01800;Dbxref=NCBI_GP:OAX71966.1;Name=OAX71966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01800;product=hypothetical protein;protein_id=OAX71966.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 16697 18898 . - . ID=gene-A3216_01805;Name=A3216_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01805 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 16697 18898 . - 0 ID=cds-OAX71967.1;Parent=gene-A3216_01805;Dbxref=NCBI_GP:OAX71967.1;Name=OAX71967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908700.1;locus_tag=A3216_01805;product=hypothetical protein;protein_id=OAX71967.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 19024 21219 . - . ID=gene-A3216_01810;Name=A3216_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01810 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 19024 21219 . - 0 ID=cds-OAX71968.1;Parent=gene-A3216_01810;Dbxref=NCBI_GP:OAX71968.1;Name=OAX71968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8ZSN3.1;locus_tag=A3216_01810;product=malate synthase G;protein_id=OAX71968.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 21459 22522 . - . ID=gene-A3216_01815;Name=A3216_01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01815;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 21459 22522 . - 0 ID=cds-A3216_01815;Parent=gene-A3216_01815;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170021.1;locus_tag=A3216_01815;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 22561 23876 . - . ID=gene-A3216_01820;Name=A3216_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01820;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 22561 23876 . - 0 ID=cds-A3216_01820;Parent=gene-A3216_01820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003882020.1;locus_tag=A3216_01820;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 24079 25515 . - . ID=gene-A3216_01825;Name=A3216_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01825 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 24079 25515 . - 0 ID=cds-OAX71969.1;Parent=gene-A3216_01825;Dbxref=NCBI_GP:OAX71969.1;Name=OAX71969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006243645.1;locus_tag=A3216_01825;product=inosine 5-monophosphate dehydrogenase;protein_id=OAX71969.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 25585 27036 . - . ID=gene-A3216_01830;Name=A3216_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01830 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 25585 27036 . - 0 ID=cds-OAX72086.1;Parent=gene-A3216_01830;Dbxref=NCBI_GP:OAX72086.1;Name=OAX72086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908697.1;locus_tag=A3216_01830;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=OAX72086.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 27176 28126 . - . ID=gene-A3216_01835;Name=A3216_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01835 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 27176 28126 . - 0 ID=cds-OAX71970.1;Parent=gene-A3216_01835;Dbxref=NCBI_GP:OAX71970.1;Name=OAX71970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771352.1;locus_tag=A3216_01835;product=Zn-dependent protease with chaperone function;protein_id=OAX71970.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 28131 28559 . - . ID=gene-A3216_01840;Name=A3216_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01840 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 28131 28559 . - 0 ID=cds-OAX71971.1;Parent=gene-A3216_01840;Dbxref=NCBI_GP:OAX71971.1;Name=OAX71971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908695.1;locus_tag=A3216_01840;product=transcriptional regulator;protein_id=OAX71971.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 29393 30793 . - . ID=gene-A3216_01845;Name=A3216_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01845 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 29393 30793 . - 0 ID=cds-OAX71972.1;Parent=gene-A3216_01845;Dbxref=NCBI_GP:OAX71972.1;Name=OAX71972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908694.1;locus_tag=A3216_01845;product=NADH dehydrogenase;protein_id=OAX71972.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 30930 31935 . - . ID=gene-A3216_01850;Name=A3216_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01850;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 30930 31935 . - 0 ID=cds-A3216_01850;Parent=gene-A3216_01850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771346.1;locus_tag=A3216_01850;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 31985 32659 . - . ID=gene-A3216_01855;Name=A3216_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01855 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 31985 32659 . - 0 ID=cds-OAX72087.1;Parent=gene-A3216_01855;Dbxref=NCBI_GP:OAX72087.1;Name=OAX72087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908693.1;locus_tag=A3216_01855;product=short-chain dehydrogenase;protein_id=OAX72087.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 32924 33675 . + . ID=gene-A3216_01860;Name=A3216_01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01860;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 32924 33675 . + 0 ID=cds-A3216_01860;Parent=gene-A3216_01860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003901271.1;locus_tag=A3216_01860;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 33684 34494 . + . ID=gene-A3216_01865;Name=A3216_01865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01865;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 33684 34494 . + 0 ID=cds-A3216_01865;Parent=gene-A3216_01865;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019305829.1;locus_tag=A3216_01865;product=molybdenum ABC transporter permease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 34500 35616 . + . ID=gene-A3216_01870;Name=A3216_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01870;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 34500 35616 . + 0 ID=cds-A3216_01870;Parent=gene-A3216_01870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011740881.1;locus_tag=A3216_01870;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 35711 36574 . + . ID=gene-A3216_01875;Name=A3216_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01875 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 35711 36574 . + 0 ID=cds-OAX71973.1;Parent=gene-A3216_01875;Dbxref=NCBI_GP:OAX71973.1;Name=OAX71973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46842.2;locus_tag=A3216_01875;product=hypothetical protein;protein_id=OAX71973.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 36734 37033 . + . ID=gene-A3216_01880;Name=A3216_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01880 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 36734 37033 . + 0 ID=cds-OAX71974.1;Parent=gene-A3216_01880;Dbxref=NCBI_GP:OAX71974.1;Name=OAX71974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908691.1;locus_tag=A3216_01880;product=hypothetical protein;protein_id=OAX71974.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 37087 38118 . + . ID=gene-A3216_01885;Name=A3216_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01885 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 37087 38118 . + 0 ID=cds-OAX71975.1;Parent=gene-A3216_01885;Dbxref=NCBI_GP:OAX71975.1;Name=OAX71975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256921.1;locus_tag=A3216_01885;product=alcohol dehydrogenase;protein_id=OAX71975.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 38768 39466 . - . ID=gene-A3216_01890;Name=A3216_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01890 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 38768 39466 . - 0 ID=cds-OAX71976.1;Parent=gene-A3216_01890;Dbxref=NCBI_GP:OAX71976.1;Name=OAX71976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01890;product=hypothetical protein;protein_id=OAX71976.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 39656 39835 . - . ID=gene-A3216_01895;Name=A3216_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01895 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 39656 39835 . - 0 ID=cds-OAX71977.1;Parent=gene-A3216_01895;Dbxref=NCBI_GP:OAX71977.1;Name=OAX71977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01895;product=hypothetical protein;protein_id=OAX71977.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 40117 40737 . - . ID=gene-A3216_01900;Name=A3216_01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01900;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 40117 40737 . - 0 ID=cds-A3216_01900;Parent=gene-A3216_01900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953026.1;locus_tag=A3216_01900;product=endonuclease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 41153 41410 . - . ID=gene-A3216_01905;Name=A3216_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01905 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 41153 41410 . - 0 ID=cds-OAX71978.1;Parent=gene-A3216_01905;Dbxref=NCBI_GP:OAX71978.1;Name=OAX71978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908689.1;locus_tag=A3216_01905;product=hypothetical protein;protein_id=OAX71978.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 42400 43644 . - . ID=gene-A3216_01910;Name=A3216_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01910 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 42400 43644 . - 0 ID=cds-OAX71979.1;Parent=gene-A3216_01910;Dbxref=NCBI_GP:OAX71979.1;Name=OAX71979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908688.1;locus_tag=A3216_01910;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=OAX71979.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 43948 44205 . - . ID=gene-A3216_01915;Name=A3216_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01915 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 43948 44205 . - 0 ID=cds-OAX72088.1;Parent=gene-A3216_01915;Dbxref=NCBI_GP:OAX72088.1;Name=OAX72088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908687.1;locus_tag=A3216_01915;product=hypothetical protein;protein_id=OAX72088.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 44614 44835 . + . ID=gene-A3216_01920;Name=A3216_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01920 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 44614 44835 . + 0 ID=cds-OAX71980.1;Parent=gene-A3216_01920;Dbxref=NCBI_GP:OAX71980.1;Name=OAX71980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908686.1;locus_tag=A3216_01920;product=hypothetical protein;protein_id=OAX71980.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 45061 45547 . - . ID=gene-A3216_01925;Name=A3216_01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01925;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 45061 45547 . - 0 ID=cds-A3216_01925;Parent=gene-A3216_01925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942167.1;locus_tag=A3216_01925;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 45587 46174 . - . ID=gene-A3216_01930;Name=A3216_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01930 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 45587 46174 . - 0 ID=cds-OAX71981.1;Parent=gene-A3216_01930;Dbxref=NCBI_GP:OAX71981.1;Name=OAX71981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876555.1;locus_tag=A3216_01930;product=alkyl hydroperoxide reductase;protein_id=OAX71981.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 46284 47219 . + . ID=gene-A3216_01935;Name=A3216_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01935 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 46284 47219 . + 0 ID=cds-OAX71982.1;Parent=gene-A3216_01935;Dbxref=NCBI_GP:OAX71982.1;Name=OAX71982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P52678.1;locus_tag=A3216_01935;product=LysR family transcriptional regulator;protein_id=OAX71982.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 49401 49880 . + . ID=gene-A3216_01940;Name=A3216_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01940 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 49401 49880 . + 0 ID=cds-OAX72089.1;Parent=gene-A3216_01940;Dbxref=NCBI_GP:OAX72089.1;Name=OAX72089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908683.1;locus_tag=A3216_01940;product=bacterioferritin;protein_id=OAX72089.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 51585 52505 . + . ID=gene-A3216_01945;Name=A3216_01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01945;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 51585 52505 . + 0 ID=cds-A3216_01945;Parent=gene-A3216_01945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003902185.1;locus_tag=A3216_01945;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 52924 53115 . - . ID=gene-A3216_01950;Name=A3216_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01950 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 52924 53115 . - 0 ID=cds-OAX71983.1;Parent=gene-A3216_01950;Dbxref=NCBI_GP:OAX71983.1;Name=OAX71983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01950;product=hypothetical protein;protein_id=OAX71983.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 53774 54037 . + . ID=gene-A3216_01955;Name=A3216_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01955 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 53774 54037 . + 0 ID=cds-OAX71984.1;Parent=gene-A3216_01955;Dbxref=NCBI_GP:OAX71984.1;Name=OAX71984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908682.1;locus_tag=A3216_01955;product=hypothetical protein;protein_id=OAX71984.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 55141 56502 . - . ID=gene-A3216_01960;Name=A3216_01960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01960;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 55141 56502 . - 0 ID=cds-A3216_01960;Parent=gene-A3216_01960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020729013.1;locus_tag=A3216_01960;product=cytochrome;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 56892 57212 . + . ID=gene-A3216_01965;Name=A3216_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01965 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 56892 57212 . + 0 ID=cds-OAX71985.1;Parent=gene-A3216_01965;Dbxref=NCBI_GP:OAX71985.1;Name=OAX71985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01965;product=hypothetical protein;protein_id=OAX71985.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 57597 58052 . - . ID=gene-A3216_01970;Name=A3216_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01970 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 57597 58052 . - 0 ID=cds-OAX71986.1;Parent=gene-A3216_01970;Dbxref=NCBI_GP:OAX71986.1;Name=OAX71986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908681.1;locus_tag=A3216_01970;product=cyclase;protein_id=OAX71986.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 58083 58550 . - . ID=gene-A3216_01975;Name=A3216_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01975 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 58083 58550 . - 0 ID=cds-OAX71987.1;Parent=gene-A3216_01975;Dbxref=NCBI_GP:OAX71987.1;Name=OAX71987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380156.1;locus_tag=A3216_01975;product=Resuscitation-promoting factor RpfC;protein_id=OAX71987.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 58665 59176 . - . ID=gene-A3216_01980;Name=A3216_01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_01980;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 58665 59176 . - 0 ID=cds-A3216_01980;Parent=gene-A3216_01980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256845.1;locus_tag=A3216_01980;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 59600 60583 . - . ID=gene-A3216_01985;Name=A3216_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01985 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 59600 60583 . - 0 ID=cds-OAX71988.1;Parent=gene-A3216_01985;Dbxref=NCBI_GP:OAX71988.1;Name=OAX71988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P31951.2;locus_tag=A3216_01985;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=OAX71988.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 61670 61942 . - . ID=gene-A3216_01990;Name=A3216_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01990 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 61670 61942 . - 0 ID=cds-OAX71989.1;Parent=gene-A3216_01990;Dbxref=NCBI_GP:OAX71989.1;Name=OAX71989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01990;product=hypothetical protein;protein_id=OAX71989.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 62006 62299 . + . ID=gene-A3216_01995;Name=A3216_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_01995 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 62006 62299 . + 0 ID=cds-OAX71990.1;Parent=gene-A3216_01995;Dbxref=NCBI_GP:OAX71990.1;Name=OAX71990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_01995;product=hypothetical protein;protein_id=OAX71990.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 62441 62734 . - . ID=gene-A3216_02000;Name=A3216_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02000 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 62441 62734 . - 0 ID=cds-OAX71991.1;Parent=gene-A3216_02000;Dbxref=NCBI_GP:OAX71991.1;Name=OAX71991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02000;product=hypothetical protein;protein_id=OAX71991.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 63027 64155 . - . ID=gene-A3216_02005;Name=A3216_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02005;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 63027 64155 . - 0 ID=cds-A3216_02005;Parent=gene-A3216_02005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007033625.1;locus_tag=A3216_02005;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 64535 64939 . + . ID=gene-A3216_02010;Name=A3216_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02010 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 64535 64939 . + 0 ID=cds-OAX71992.1;Parent=gene-A3216_02010;Dbxref=NCBI_GP:OAX71992.1;Name=OAX71992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771261.1;locus_tag=A3216_02010;product=hypothetical protein;protein_id=OAX71992.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 65335 65559 . + . ID=gene-A3216_02015;Name=A3216_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02015 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 65335 65559 . + 0 ID=cds-OAX72090.1;Parent=gene-A3216_02015;Dbxref=NCBI_GP:OAX72090.1;Name=OAX72090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019735098.1;locus_tag=A3216_02015;product=hypothetical protein;protein_id=OAX72090.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 65551 66686 . - . ID=gene-A3216_02020;Name=A3216_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02020;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 65551 66686 . - 0 ID=cds-A3216_02020;Parent=gene-A3216_02020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005083600.1;locus_tag=A3216_02020;product=monooxygenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 66974 67885 . - . ID=gene-A3216_02025;Name=A3216_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02025 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 66974 67885 . - 0 ID=cds-OAX71993.1;Parent=gene-A3216_02025;Dbxref=NCBI_GP:OAX71993.1;Name=OAX71993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956812.1;locus_tag=A3216_02025;product=SAM-dependent methyltransferase;protein_id=OAX71993.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 68534 68863 . - . ID=gene-A3216_02030;Name=A3216_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02030 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 68534 68863 . - 0 ID=cds-OAX71994.1;Parent=gene-A3216_02030;Dbxref=NCBI_GP:OAX71994.1;Name=OAX71994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02030;product=hypothetical protein;protein_id=OAX71994.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 69250 69474 . - . ID=gene-A3216_02035;Name=A3216_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02035 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 69250 69474 . - 0 ID=cds-OAX71995.1;Parent=gene-A3216_02035;Dbxref=NCBI_GP:OAX71995.1;Name=OAX71995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02035;product=hypothetical protein;protein_id=OAX71995.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 69471 69887 . - . ID=gene-A3216_02040;Name=A3216_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02040 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 69471 69887 . - 0 ID=cds-OAX71996.1;Parent=gene-A3216_02040;Dbxref=NCBI_GP:OAX71996.1;Name=OAX71996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02040;product=hypothetical protein;protein_id=OAX71996.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 70605 71903 . + . ID=gene-A3216_02045;Name=A3216_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02045 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 70605 71903 . + 0 ID=cds-OAX71997.1;Parent=gene-A3216_02045;Dbxref=NCBI_GP:OAX71997.1;Name=OAX71997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908675.1;locus_tag=A3216_02045;product=competence/damage-inducible protein A;protein_id=OAX71997.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 71878 73161 . - . ID=gene-A3216_02050;Name=A3216_02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02050;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 71878 73161 . - 0 ID=cds-A3216_02050;Parent=gene-A3216_02050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009976915.1;locus_tag=A3216_02050;product=sugar transporter;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 73467 73847 . + . ID=gene-A3216_02055;Name=A3216_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02055 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 73467 73847 . + 0 ID=cds-OAX71998.1;Parent=gene-A3216_02055;Dbxref=NCBI_GP:OAX71998.1;Name=OAX71998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908674.1;locus_tag=A3216_02055;product=hypothetical protein;protein_id=OAX71998.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 74315 74734 . + . ID=gene-A3216_02060;Name=A3216_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02060 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 74315 74734 . + 0 ID=cds-OAX71999.1;Parent=gene-A3216_02060;Dbxref=NCBI_GP:OAX71999.1;Name=OAX71999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908673.1;locus_tag=A3216_02060;product=hypothetical protein;protein_id=OAX71999.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 74752 75714 . - . ID=gene-A3216_02065;Name=A3216_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02065 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 74752 75714 . - 0 ID=cds-OAX72000.1;Parent=gene-A3216_02065;Dbxref=NCBI_GP:OAX72000.1;Name=OAX72000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908672.1;locus_tag=A3216_02065;product=amino acid oxidase;protein_id=OAX72000.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 75769 76230 . - . ID=gene-A3216_02070;Name=A3216_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02070 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 75769 76230 . - 0 ID=cds-OAX72001.1;Parent=gene-A3216_02070;Dbxref=NCBI_GP:OAX72001.1;Name=OAX72001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908671.1;locus_tag=A3216_02070;product=hypothetical protein;protein_id=OAX72001.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 76312 78279 . - . ID=gene-A3216_02075;Name=A3216_02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02075;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 76312 78279 . - 0 ID=cds-A3216_02075;Parent=gene-A3216_02075;Note=has catalase and peroxidase activities%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003916002.1;locus_tag=A3216_02075;product=hydroperoxidase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 78860 79051 . - . ID=gene-A3216_02080;Name=A3216_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02080 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 78860 79051 . - 0 ID=cds-OAX72002.1;Parent=gene-A3216_02080;Dbxref=NCBI_GP:OAX72002.1;Name=OAX72002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02080;product=hypothetical protein;protein_id=OAX72002.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 79765 80028 . + . ID=gene-A3216_02085;Name=A3216_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02085 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 79765 80028 . + 0 ID=cds-OAX72003.1;Parent=gene-A3216_02085;Dbxref=NCBI_GP:OAX72003.1;Name=OAX72003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02085;product=hypothetical protein;protein_id=OAX72003.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 80158 80340 . + . ID=gene-A3216_02090;Name=A3216_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02090 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 80158 80340 . + 0 ID=cds-OAX72004.1;Parent=gene-A3216_02090;Dbxref=NCBI_GP:OAX72004.1;Name=OAX72004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02090;product=hypothetical protein;protein_id=OAX72004.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 80430 80621 . - . ID=gene-A3216_02095;Name=A3216_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02095 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 80430 80621 . - 0 ID=cds-OAX72005.1;Parent=gene-A3216_02095;Dbxref=NCBI_GP:OAX72005.1;Name=OAX72005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02095;product=hypothetical protein;protein_id=OAX72005.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 81513 82447 . - . ID=gene-A3216_02100;Name=A3216_02100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02100;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 81513 82447 . - 0 ID=cds-A3216_02100;Parent=gene-A3216_02100;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020786503.1;locus_tag=A3216_02100;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 82535 82762 . - . ID=gene-A3216_02105;Name=A3216_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02105 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 82535 82762 . - 0 ID=cds-OAX72006.1;Parent=gene-A3216_02105;Dbxref=NCBI_GP:OAX72006.1;Name=OAX72006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02105;product=hypothetical protein;protein_id=OAX72006.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 83420 84199 . - . ID=gene-A3216_02110;Name=A3216_02110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02110;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 83420 84199 . - 0 ID=cds-A3216_02110;Parent=gene-A3216_02110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003903678.1;locus_tag=A3216_02110;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 84353 84678 . - . ID=gene-A3216_02115;Name=A3216_02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02115;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 84353 84678 . - 0 ID=cds-A3216_02115;Parent=gene-A3216_02115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256792.1;locus_tag=A3216_02115;product=polyketide cyclase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 84877 85553 . + . ID=gene-A3216_02120;Name=A3216_02120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02120;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 84877 85553 . + 0 ID=cds-A3216_02120;Parent=gene-A3216_02120;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012394522.1;locus_tag=A3216_02120;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 85634 87886 . + . ID=gene-A3216_02125;Name=A3216_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02125 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 85634 87886 . + 0 ID=cds-OAX72007.1;Parent=gene-A3216_02125;Dbxref=NCBI_GP:OAX72007.1;Name=OAX72007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46840.2;locus_tag=A3216_02125;product=copper-translocating P-type ATPase;protein_id=OAX72007.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 88285 88542 . + . ID=gene-A3216_02130;Name=A3216_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02130 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 88285 88542 . + 0 ID=cds-OAX72008.1;Parent=gene-A3216_02130;Dbxref=NCBI_GP:OAX72008.1;Name=OAX72008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02130;product=hypothetical protein;protein_id=OAX72008.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 88947 90926 . - . ID=gene-A3216_02135;Name=A3216_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02135 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 88947 90926 . - 0 ID=cds-OAX72009.1;Parent=gene-A3216_02135;Dbxref=NCBI_GP:OAX72009.1;Name=OAX72009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53525.1;locus_tag=A3216_02135;product=hypothetical protein;protein_id=OAX72009.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 91039 91671 . + . ID=gene-A3216_02140;Name=A3216_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02140 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 91039 91671 . + 0 ID=cds-OAX72010.1;Parent=gene-A3216_02140;Dbxref=NCBI_GP:OAX72010.1;Name=OAX72010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908668.1;locus_tag=A3216_02140;product=DUF5134 domain-containing protein;protein_id=OAX72010.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 91678 95883 . - . ID=gene-A3216_02145;Name=A3216_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02145 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 91678 95883 . - 0 ID=cds-OAX72011.1;Parent=gene-A3216_02145;Dbxref=NCBI_GP:OAX72011.1;Name=OAX72011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908667.1;locus_tag=A3216_02145;product=peptide synthase;protein_id=OAX72011.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 95880 96116 . - . ID=gene-A3216_02150;Name=A3216_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02150 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 95880 96116 . - 0 ID=cds-OAX72012.1;Parent=gene-A3216_02150;Dbxref=NCBI_GP:OAX72012.1;Name=OAX72012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908666.1;locus_tag=A3216_02150;product=hypothetical protein;protein_id=OAX72012.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 96109 97707 . - . ID=gene-A3216_02155;Name=A3216_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02155 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 96109 97707 . - 0 ID=cds-OAX72013.1;Parent=gene-A3216_02155;Dbxref=NCBI_GP:OAX72013.1;Name=OAX72013.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908665.1;locus_tag=A3216_02155;product=acyl-CoA synthetase;protein_id=OAX72013.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 97737 98288 . - . ID=gene-A3216_02160;Name=A3216_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02160 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 97737 98288 . - 0 ID=cds-OAX72014.1;Parent=gene-A3216_02160;Dbxref=NCBI_GP:OAX72014.1;Name=OAX72014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908664.1;locus_tag=A3216_02160;product=hypothetical protein;protein_id=OAX72014.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 98285 99154 . - . ID=gene-A3216_02165;Name=A3216_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02165 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 98285 99154 . - 0 ID=cds-OAX72015.1;Parent=gene-A3216_02165;Dbxref=NCBI_GP:OAX72015.1;Name=OAX72015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908663.1;locus_tag=A3216_02165;product=taurine catabolism dioxygenase;protein_id=OAX72015.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 99303 100709 . - . ID=gene-A3216_02170;Name=A3216_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02170 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 99303 100709 . - 0 ID=cds-OAX72091.1;Parent=gene-A3216_02170;Dbxref=NCBI_GP:OAX72091.1;Name=OAX72091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908662.1;locus_tag=A3216_02170;product=hypothetical protein;protein_id=OAX72091.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 101357 101611 . + . ID=gene-A3216_02175;Name=A3216_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02175 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 101357 101611 . + 0 ID=cds-OAX72016.1;Parent=gene-A3216_02175;Dbxref=NCBI_GP:OAX72016.1;Name=OAX72016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02175;product=hypothetical protein;protein_id=OAX72016.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 101796 102038 . + . ID=gene-A3216_02180;Name=A3216_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02180 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 101796 102038 . + 0 ID=cds-OAX72017.1;Parent=gene-A3216_02180;Dbxref=NCBI_GP:OAX72017.1;Name=OAX72017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908661.1;locus_tag=A3216_02180;product=hypothetical protein;protein_id=OAX72017.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 102118 102468 . + . ID=gene-A3216_02185;Name=A3216_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02185 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 102118 102468 . + 0 ID=cds-OAX72018.1;Parent=gene-A3216_02185;Dbxref=NCBI_GP:OAX72018.1;Name=OAX72018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908660.1;locus_tag=A3216_02185;product=hypothetical protein;protein_id=OAX72018.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 102785 103498 . + . ID=gene-A3216_02190;Name=A3216_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02190 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 102785 103498 . + 0 ID=cds-OAX72092.1;Parent=gene-A3216_02190;Dbxref=NCBI_GP:OAX72092.1;Name=OAX72092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908659.1;locus_tag=A3216_02190;product=hypothetical protein;protein_id=OAX72092.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 103476 105776 . - . ID=gene-A3216_02195;Name=A3216_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02195 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 103476 105776 . - 0 ID=cds-OAX72019.1;Parent=gene-A3216_02195;Dbxref=NCBI_GP:OAX72019.1;Name=OAX72019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908658.1;locus_tag=A3216_02195;product=copper-translocating P-type ATPase;protein_id=OAX72019.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 105969 106540 . + . ID=gene-A3216_02200;Name=A3216_02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02200;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 105969 106540 . + 0 ID=cds-A3216_02200;Parent=gene-A3216_02200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815144.1;locus_tag=A3216_02200;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 107113 109401 . + . ID=gene-A3216_02205;Name=A3216_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02205 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 107113 109401 . + 0 ID=cds-OAX72020.1;Parent=gene-A3216_02205;Dbxref=NCBI_GP:OAX72020.1;Name=OAX72020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256786.1;locus_tag=A3216_02205;product=isocitrate lyase;protein_id=OAX72020.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 110472 110735 . + . ID=gene-A3216_02210;Name=A3216_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02210 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 110472 110735 . + 0 ID=cds-OAX72021.1;Parent=gene-A3216_02210;Dbxref=NCBI_GP:OAX72021.1;Name=OAX72021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02210;product=hypothetical protein;protein_id=OAX72021.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 111318 111785 . - . ID=gene-A3216_02215;Name=A3216_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02215 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 111318 111785 . - 0 ID=cds-OAX72022.1;Parent=gene-A3216_02215;Dbxref=NCBI_GP:OAX72022.1;Name=OAX72022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908656.1;locus_tag=A3216_02215;product=polyketide cyclase;protein_id=OAX72022.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 112298 112606 . - . ID=gene-A3216_02220;Name=A3216_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02220 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 112298 112606 . - 0 ID=cds-OAX72023.1;Parent=gene-A3216_02220;Dbxref=NCBI_GP:OAX72023.1;Name=OAX72023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908655.1;locus_tag=A3216_02220;product=hypothetical protein;protein_id=OAX72023.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 112837 113112 . - . ID=gene-A3216_02225;Name=A3216_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02225 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 112837 113112 . - 0 ID=cds-OAX72024.1;Parent=gene-A3216_02225;Dbxref=NCBI_GP:OAX72024.1;Name=OAX72024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02225;product=hypothetical protein;protein_id=OAX72024.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 114862 115269 . + . ID=gene-A3216_02230;Name=A3216_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02230 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 114862 115269 . + 0 ID=cds-OAX72025.1;Parent=gene-A3216_02230;Dbxref=NCBI_GP:OAX72025.1;Name=OAX72025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908654.1;locus_tag=A3216_02230;product=hypothetical protein;protein_id=OAX72025.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 116448 116777 . + . ID=gene-A3216_02235;Name=A3216_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02235 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 116448 116777 . + 0 ID=cds-OAX72026.1;Parent=gene-A3216_02235;Dbxref=NCBI_GP:OAX72026.1;Name=OAX72026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02235;product=hypothetical protein;protein_id=OAX72026.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 116838 117134 . - . ID=gene-A3216_02240;Name=A3216_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02240 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 116838 117134 . - 0 ID=cds-OAX72027.1;Parent=gene-A3216_02240;Dbxref=NCBI_GP:OAX72027.1;Name=OAX72027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02240;product=hypothetical protein;protein_id=OAX72027.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 117637 117984 . + . ID=gene-A3216_02245;Name=A3216_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02245 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 117637 117984 . + 0 ID=cds-OAX72028.1;Parent=gene-A3216_02245;Dbxref=NCBI_GP:OAX72028.1;Name=OAX72028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908653.1;locus_tag=A3216_02245;product=hypothetical protein;protein_id=OAX72028.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 118151 118393 . - . ID=gene-A3216_02250;Name=A3216_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02250 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 118151 118393 . - 0 ID=cds-OAX72029.1;Parent=gene-A3216_02250;Dbxref=NCBI_GP:OAX72029.1;Name=OAX72029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02250;product=hypothetical protein;protein_id=OAX72029.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 119033 120751 . - . ID=gene-A3216_02255;Name=A3216_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02255 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 119033 120751 . - 0 ID=cds-OAX72030.1;Parent=gene-A3216_02255;Dbxref=NCBI_GP:OAX72030.1;Name=OAX72030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908652.1;locus_tag=A3216_02255;product=transporter;protein_id=OAX72030.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 122662 122892 . + . ID=gene-A3216_02260;Name=A3216_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02260 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 122662 122892 . + 0 ID=cds-OAX72031.1;Parent=gene-A3216_02260;Dbxref=NCBI_GP:OAX72031.1;Name=OAX72031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908651.1;locus_tag=A3216_02260;product=hypothetical protein;protein_id=OAX72031.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 123548 123772 . + . ID=gene-A3216_02265;Name=A3216_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02265 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 123548 123772 . + 0 ID=cds-OAX72032.1;Parent=gene-A3216_02265;Dbxref=NCBI_GP:OAX72032.1;Name=OAX72032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02265;product=hypothetical protein;protein_id=OAX72032.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 124872 125147 . - . ID=gene-A3216_02270;Name=A3216_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02270 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 124872 125147 . - 0 ID=cds-OAX72033.1;Parent=gene-A3216_02270;Dbxref=NCBI_GP:OAX72033.1;Name=OAX72033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02270;product=hypothetical protein;protein_id=OAX72033.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 125213 126357 . - . ID=gene-A3216_02275;Name=A3216_02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02275;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 125213 126357 . - 0 ID=cds-A3216_02275;Parent=gene-A3216_02275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015354359.1;locus_tag=A3216_02275;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 126374 126966 . - . ID=gene-A3216_02280;Name=A3216_02280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02280;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 126374 126966 . - 0 ID=cds-A3216_02280;Parent=gene-A3216_02280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015354358.1;locus_tag=A3216_02280;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 127708 127956 . - . ID=gene-A3216_02285;Name=A3216_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02285 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 127708 127956 . - 0 ID=cds-OAX72034.1;Parent=gene-A3216_02285;Dbxref=NCBI_GP:OAX72034.1;Name=OAX72034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02285;product=hypothetical protein;protein_id=OAX72034.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 128232 128570 . - . ID=gene-A3216_02290;Name=A3216_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02290 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 128232 128570 . - 0 ID=cds-OAX72035.1;Parent=gene-A3216_02290;Dbxref=NCBI_GP:OAX72035.1;Name=OAX72035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02290;product=hypothetical protein;protein_id=OAX72035.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 128705 129476 . + . ID=gene-A3216_02295;Name=A3216_02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02295;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 128705 129476 . + 0 ID=cds-A3216_02295;Parent=gene-A3216_02295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167480.1;locus_tag=A3216_02295;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 129537 130181 . - . ID=gene-A3216_02300;Name=A3216_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02300 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 129537 130181 . - 0 ID=cds-OAX72093.1;Parent=gene-A3216_02300;Dbxref=NCBI_GP:OAX72093.1;Name=OAX72093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873852.1;locus_tag=A3216_02300;product=RNA methyltransferase;protein_id=OAX72093.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 130178 131026 . - . ID=gene-A3216_02305;Name=A3216_02305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02305;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 130178 131026 . - 0 ID=cds-A3216_02305;Parent=gene-A3216_02305;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011726252.1;locus_tag=A3216_02305;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 131077 131616 . - . ID=gene-A3216_02310;Name=A3216_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02310 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 131077 131616 . - 0 ID=cds-OAX72094.1;Parent=gene-A3216_02310;Dbxref=NCBI_GP:OAX72094.1;Name=OAX72094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB28.1;locus_tag=A3216_02310;product=orotate phosphoribosyltransferase;protein_id=OAX72094.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 132352 133212 . - . ID=gene-A3216_02315;Name=A3216_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02315 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 132352 133212 . - 0 ID=cds-OAX72036.1;Parent=gene-A3216_02315;Dbxref=NCBI_GP:OAX72036.1;Name=OAX72036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908926.1;locus_tag=A3216_02315;product=hypothetical protein;protein_id=OAX72036.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 133297 135843 . - . ID=gene-A3216_02320;Name=A3216_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02320 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 133297 135843 . - 0 ID=cds-OAX72095.1;Parent=gene-A3216_02320;Dbxref=NCBI_GP:OAX72095.1;Name=OAX72095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005624268.1;locus_tag=A3216_02320;product=ATP-dependent chaperone ClpB;protein_id=OAX72095.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 136774 137775 . + . ID=gene-A3216_02325;Name=A3216_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02325 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 136774 137775 . + 0 ID=cds-OAX72096.1;Parent=gene-A3216_02325;Dbxref=NCBI_GP:OAX72096.1;Name=OAX72096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908928.1;locus_tag=A3216_02325;product=hypothetical protein;protein_id=OAX72096.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 139375 139770 . - . ID=gene-A3216_02330;Name=A3216_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02330 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 139375 139770 . - 0 ID=cds-OAX72037.1;Parent=gene-A3216_02330;Dbxref=NCBI_GP:OAX72037.1;Name=OAX72037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012392599.1;locus_tag=A3216_02330;product=MerR family transcriptional regulator;protein_id=OAX72037.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 139777 140943 . - . ID=gene-A3216_02335;Name=A3216_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02335 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 139777 140943 . - 0 ID=cds-OAX72038.1;Parent=gene-A3216_02335;Dbxref=NCBI_GP:OAX72038.1;Name=OAX72038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q02605.2;locus_tag=A3216_02335;product=molecular chaperone DnaJ;protein_id=OAX72038.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 140957 141646 . - . ID=gene-A3216_02340;Name=A3216_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02340 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 140957 141646 . - 0 ID=cds-OAX72039.1;Parent=gene-A3216_02340;Dbxref=NCBI_GP:OAX72039.1;Name=OAX72039.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB23.1;locus_tag=A3216_02340;product=nucleotide exchange factor GrpE;protein_id=OAX72039.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 141643 143505 . - . ID=gene-A3216_02345;Name=A3216_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02345 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 141643 143505 . - 0 ID=cds-OAX72040.1;Parent=gene-A3216_02345;Dbxref=NCBI_GP:OAX72040.1;Name=OAX72040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908932.1;locus_tag=A3216_02345;product=molecular chaperone DnaK;protein_id=OAX72040.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 144194 144667 . + . ID=gene-A3216_02350;Name=A3216_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02350 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 144194 144667 . + 0 ID=cds-OAX72041.1;Parent=gene-A3216_02350;Dbxref=NCBI_GP:OAX72041.1;Name=OAX72041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908933.1;locus_tag=A3216_02350;product=TetR family transcriptional regulator;protein_id=OAX72041.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 144697 145356 . + . ID=gene-A3216_02355;Name=A3216_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02355 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 144697 145356 . + 0 ID=cds-OAX72042.1;Parent=gene-A3216_02355;Dbxref=NCBI_GP:OAX72042.1;Name=OAX72042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908934.1;locus_tag=A3216_02355;product=enoyl-CoA hydratase;protein_id=OAX72042.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 146961 147369 . + . ID=gene-A3216_02360;Name=A3216_02360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02360;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 146961 147369 . + 0 ID=cds-A3216_02360;Parent=gene-A3216_02360;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013470776.1;locus_tag=A3216_02360;product=4-hydroxybenzoyl-CoA reductase subunit gamma;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 147540 148112 . + . ID=gene-A3216_02365;Name=A3216_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02365 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 147540 148112 . + 0 ID=cds-OAX72043.1;Parent=gene-A3216_02365;Dbxref=NCBI_GP:OAX72043.1;Name=OAX72043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712486.1;locus_tag=A3216_02365;product=hypothetical protein;protein_id=OAX72043.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 148201 148683 . + . ID=gene-A3216_02370;Name=A3216_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02370 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 148201 148683 . + 0 ID=cds-OAX72044.1;Parent=gene-A3216_02370;Dbxref=NCBI_GP:OAX72044.1;Name=OAX72044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02370;product=hypothetical protein;protein_id=OAX72044.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 150258 152900 . + . ID=gene-A3216_02375;Name=A3216_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02375 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 150258 152900 . + 0 ID=cds-OAX72045.1;Parent=gene-A3216_02375;Dbxref=NCBI_GP:OAX72045.1;Name=OAX72045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908935.1;locus_tag=A3216_02375;product=FeS-binding protein;protein_id=OAX72045.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 152933 154222 . + . ID=gene-A3216_02380;Name=A3216_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02380 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 152933 154222 . + 0 ID=cds-OAX72046.1;Parent=gene-A3216_02380;Dbxref=NCBI_GP:OAX72046.1;Name=OAX72046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788876.1;locus_tag=A3216_02380;product=aminotransferase;protein_id=OAX72046.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 154377 155243 . - . ID=gene-A3216_02385;Name=A3216_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02385 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 154377 155243 . - 0 ID=cds-OAX72047.1;Parent=gene-A3216_02385;Dbxref=NCBI_GP:OAX72047.1;Name=OAX72047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908937.1;locus_tag=A3216_02385;product=glucose-1-phosphate thymidylyltransferase;protein_id=OAX72047.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 155493 155858 . + . ID=gene-A3216_02390;Name=A3216_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02390 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 155493 155858 . + 0 ID=cds-OAX72048.1;Parent=gene-A3216_02390;Dbxref=NCBI_GP:OAX72048.1;Name=OAX72048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02390;product=hypothetical protein;protein_id=OAX72048.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 157126 157380 . - . ID=gene-A3216_02395;Name=A3216_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02395 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 157126 157380 . - 0 ID=cds-OAX72049.1;Parent=gene-A3216_02395;Dbxref=NCBI_GP:OAX72049.1;Name=OAX72049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02395;product=hypothetical protein;protein_id=OAX72049.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 158026 158598 . - . ID=gene-A3216_02400;Name=A3216_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02400 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 158026 158598 . - 0 ID=cds-OAX72050.1;Parent=gene-A3216_02400;Dbxref=NCBI_GP:OAX72050.1;Name=OAX72050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009935715.1;locus_tag=A3216_02400;product=deoxycytidine triphosphate deaminase;protein_id=OAX72050.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 159433 159506 . + . ID=gene-A3216_02405;Name=A3216_02405;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_02405 GCA_001648835.1|LVXE01000003.1 tRNAscan-SE tRNA 159433 159506 . + . ID=rna-A3216_02405;Parent=gene-A3216_02405;anticodon=(pos:159465..159467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02405;product=tRNA-Gly GCA_001648835.1|LVXE01000003.1 tRNAscan-SE exon 159433 159506 . + . ID=exon-A3216_02405-1;Parent=rna-A3216_02405;anticodon=(pos:159465..159467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02405;product=tRNA-Gly GCA_001648835.1|LVXE01000003.1 Genbank gene 160906 161100 . - . ID=gene-A3216_02410;Name=A3216_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02410 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 160906 161100 . - 0 ID=cds-OAX72051.1;Parent=gene-A3216_02410;Dbxref=NCBI_GP:OAX72051.1;Name=OAX72051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02410;product=hypothetical protein;protein_id=OAX72051.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 161269 161568 . - . ID=gene-A3216_02415;Name=A3216_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02415 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 161269 161568 . - 0 ID=cds-OAX72052.1;Parent=gene-A3216_02415;Dbxref=NCBI_GP:OAX72052.1;Name=OAX72052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02415;product=hypothetical protein;protein_id=OAX72052.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 161893 162096 . + . ID=gene-A3216_02420;Name=A3216_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02420 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 161893 162096 . + 0 ID=cds-OAX72053.1;Parent=gene-A3216_02420;Dbxref=NCBI_GP:OAX72053.1;Name=OAX72053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02420;product=hypothetical protein;protein_id=OAX72053.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 162286 162540 . - . ID=gene-A3216_02425;Name=A3216_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02425 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 162286 162540 . - 0 ID=cds-OAX72054.1;Parent=gene-A3216_02425;Dbxref=NCBI_GP:OAX72054.1;Name=OAX72054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02425;product=hypothetical protein;protein_id=OAX72054.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 162949 163284 . + . ID=gene-A3216_02430;Name=A3216_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02430 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 162949 163284 . + 0 ID=cds-OAX72055.1;Parent=gene-A3216_02430;Dbxref=NCBI_GP:OAX72055.1;Name=OAX72055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02430;product=hypothetical protein;protein_id=OAX72055.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 163430 163624 . + . ID=gene-A3216_02435;Name=A3216_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02435 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 163430 163624 . + 0 ID=cds-OAX72056.1;Parent=gene-A3216_02435;Dbxref=NCBI_GP:OAX72056.1;Name=OAX72056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02435;product=hypothetical protein;protein_id=OAX72056.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 164562 165099 . - . ID=gene-A3216_02440;Name=A3216_02440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02440;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 164562 165099 . - 0 ID=cds-A3216_02440;Parent=gene-A3216_02440;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019737340.1;locus_tag=A3216_02440;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 165695 167216 . + . ID=gene-A3216_02445;Name=A3216_02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02445;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 165695 167216 . + 0 ID=cds-A3216_02445;Parent=gene-A3216_02445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873915.1;locus_tag=A3216_02445;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 169893 170285 . - . ID=gene-A3216_02450;Name=A3216_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02450 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 169893 170285 . - 0 ID=cds-OAX72097.1;Parent=gene-A3216_02450;Dbxref=NCBI_GP:OAX72097.1;Name=OAX72097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908939.1;locus_tag=A3216_02450;product=hypothetical protein;protein_id=OAX72097.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 171998 172180 . - . ID=gene-A3216_02455;Name=A3216_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02455 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 171998 172180 . - 0 ID=cds-OAX72057.1;Parent=gene-A3216_02455;Dbxref=NCBI_GP:OAX72057.1;Name=OAX72057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02455;product=hypothetical protein;protein_id=OAX72057.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 172887 174109 . - . ID=gene-A3216_02460;Name=A3216_02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02460;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 172887 174109 . - 0 ID=cds-A3216_02460;Parent=gene-A3216_02460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005084285.1;locus_tag=A3216_02460;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 174667 175323 . - . ID=gene-A3216_02465;Name=A3216_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02465 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 174667 175323 . - 0 ID=cds-OAX72058.1;Parent=gene-A3216_02465;Dbxref=NCBI_GP:OAX72058.1;Name=OAX72058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955662.1;locus_tag=A3216_02465;product=hypothetical protein;protein_id=OAX72058.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 175764 175979 . - . ID=gene-A3216_02470;Name=A3216_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02470 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 175764 175979 . - 0 ID=cds-OAX72059.1;Parent=gene-A3216_02470;Dbxref=NCBI_GP:OAX72059.1;Name=OAX72059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02470;product=hypothetical protein;protein_id=OAX72059.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 176266 176484 . + . ID=gene-A3216_02475;Name=A3216_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02475 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 176266 176484 . + 0 ID=cds-OAX72060.1;Parent=gene-A3216_02475;Dbxref=NCBI_GP:OAX72060.1;Name=OAX72060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02475;product=hypothetical protein;protein_id=OAX72060.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 179333 180352 . - . ID=gene-A3216_02480;Name=A3216_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02480 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 179333 180352 . - 0 ID=cds-OAX72061.1;Parent=gene-A3216_02480;Dbxref=NCBI_GP:OAX72061.1;Name=OAX72061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908941.1;locus_tag=A3216_02480;product=type VII secretion protein EccE;protein_id=OAX72061.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 180349 181776 . - . ID=gene-A3216_02485;Name=A3216_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02485 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 180349 181776 . - 0 ID=cds-OAX72062.1;Parent=gene-A3216_02485;Dbxref=NCBI_GP:OAX72062.1;Name=OAX72062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908942.1;locus_tag=A3216_02485;product=type VII secretion-associated serine protease mycosin;protein_id=OAX72062.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 181787 183244 . - . ID=gene-A3216_02490;Name=A3216_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02490 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 181787 183244 . - 0 ID=cds-OAX72063.1;Parent=gene-A3216_02490;Dbxref=NCBI_GP:OAX72063.1;Name=OAX72063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908943.1;locus_tag=A3216_02490;product=type VII secretion integral membrane protein EccD;protein_id=OAX72063.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 183386 184255 . - . ID=gene-A3216_02495;Name=A3216_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02495 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 183386 184255 . - 0 ID=cds-OAX72064.1;Parent=gene-A3216_02495;Dbxref=NCBI_GP:OAX72064.1;Name=OAX72064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908944.1;locus_tag=A3216_02495;product=secretion protein EspG;protein_id=OAX72064.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 184266 184556 . - . ID=gene-A3216_02500;Name=A3216_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02500 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 184266 184556 . - 0 ID=cds-OAX72065.1;Parent=gene-A3216_02500;Dbxref=NCBI_GP:OAX72065.1;Name=OAX72065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD33.1;locus_tag=A3216_02500;product=type VII secretion protein EsxH;protein_id=OAX72065.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 184595 184891 . - . ID=gene-A3216_02505;Name=A3216_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02505 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 184595 184891 . - 0 ID=cds-OAX72066.1;Parent=gene-A3216_02505;Dbxref=NCBI_GP:OAX72066.1;Name=OAX72066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908946.1;locus_tag=A3216_02505;product=type VII secretion protein EsxS;protein_id=OAX72066.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 185119 186177 . - . ID=gene-A3216_02510;Name=A3216_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02510 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 185119 186177 . - 0 ID=cds-OAX72067.1;Parent=gene-A3216_02510;Dbxref=NCBI_GP:OAX72067.1;Name=OAX72067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02510;product=hypothetical protein;protein_id=OAX72067.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 186180 186488 . - . ID=gene-A3216_02515;Name=A3216_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02515 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 186180 186488 . - 0 ID=cds-OAX72068.1;Parent=gene-A3216_02515;Dbxref=NCBI_GP:OAX72068.1;Name=OAX72068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908947.1;locus_tag=A3216_02515;product=cell motility protein;protein_id=OAX72068.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 186523 190512 . - . ID=gene-A3216_02520;Name=A3216_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02520 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 186523 190512 . - 0 ID=cds-OAX72069.1;Parent=gene-A3216_02520;Dbxref=NCBI_GP:OAX72069.1;Name=OAX72069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908948.1;locus_tag=A3216_02520;product=type VII secretion protein EccC;protein_id=OAX72069.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 190509 192167 . - . ID=gene-A3216_02525;Name=A3216_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02525 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 190509 192167 . - 0 ID=cds-OAX72070.1;Parent=gene-A3216_02525;Dbxref=NCBI_GP:OAX72070.1;Name=OAX72070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908949.1;locus_tag=A3216_02525;product=type VII secretion protein EccB;protein_id=OAX72070.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 192160 194082 . - . ID=gene-A3216_02530;Name=A3216_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02530 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 192160 194082 . - 0 ID=cds-OAX72071.1;Parent=gene-A3216_02530;Dbxref=NCBI_GP:OAX72071.1;Name=OAX72071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD28.1;locus_tag=A3216_02530;product=type VII secretion AAA-ATPase EccA;protein_id=OAX72071.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 194287 194559 . - . ID=gene-A3216_02535;Name=A3216_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02535 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 194287 194559 . - 0 ID=cds-OAX72072.1;Parent=gene-A3216_02535;Dbxref=NCBI_GP:OAX72072.1;Name=OAX72072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02535;product=hypothetical protein;protein_id=OAX72072.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 195088 195294 . - . ID=gene-A3216_02540;Name=A3216_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02540 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 195088 195294 . - 0 ID=cds-OAX72073.1;Parent=gene-A3216_02540;Dbxref=NCBI_GP:OAX72073.1;Name=OAX72073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02540;product=hypothetical protein;protein_id=OAX72073.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 195464 195736 . - . ID=gene-A3216_02545;Name=A3216_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02545 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 195464 195736 . - 0 ID=cds-OAX72074.1;Parent=gene-A3216_02545;Dbxref=NCBI_GP:OAX72074.1;Name=OAX72074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02545;product=hypothetical protein;protein_id=OAX72074.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 198451 198916 . - . ID=gene-A3216_02550;Name=A3216_02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02550;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 198451 198916 . - 0 ID=cds-A3216_02550;Parent=gene-A3216_02550;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014943072.1;locus_tag=A3216_02550;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 199651 199977 . + . ID=gene-A3216_02555;Name=A3216_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02555 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 199651 199977 . + 0 ID=cds-OAX72075.1;Parent=gene-A3216_02555;Dbxref=NCBI_GP:OAX72075.1;Name=OAX72075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02555;product=hypothetical protein;protein_id=OAX72075.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 200351 201468 . + . ID=gene-A3216_02560;Name=A3216_02560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02560;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 200351 201468 . + 0 ID=cds-A3216_02560;Parent=gene-A3216_02560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010950370.1;locus_tag=A3216_02560;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 201585 201926 . + . ID=gene-A3216_02565;Name=A3216_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02565 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 201585 201926 . + 0 ID=cds-OAX72076.1;Parent=gene-A3216_02565;Dbxref=NCBI_GP:OAX72076.1;Name=OAX72076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02565;product=hypothetical protein;protein_id=OAX72076.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 203737 205416 . - . ID=gene-A3216_02570;Name=A3216_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02570 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 203737 205416 . - 0 ID=cds-OAX72077.1;Parent=gene-A3216_02570;Dbxref=NCBI_GP:OAX72077.1;Name=OAX72077.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727890.1;locus_tag=A3216_02570;product=acyl-CoA synthetase;protein_id=OAX72077.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank pseudogene 206843 207454 . + . ID=gene-A3216_02575;Name=A3216_02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02575;pseudo=true GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 206843 207454 . + 0 ID=cds-A3216_02575;Parent=gene-A3216_02575;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712498.1;locus_tag=A3216_02575;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 207615 208283 . + . ID=gene-A3216_02580;Name=A3216_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02580 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 207615 208283 . + 0 ID=cds-OAX72078.1;Parent=gene-A3216_02580;Dbxref=NCBI_GP:OAX72078.1;Name=OAX72078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908952.1;locus_tag=A3216_02580;product=allophanate hydrolase;protein_id=OAX72078.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 208305 209222 . + . ID=gene-A3216_02585;Name=A3216_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02585 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 208305 209222 . + 0 ID=cds-OAX72079.1;Parent=gene-A3216_02585;Dbxref=NCBI_GP:OAX72079.1;Name=OAX72079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908953.1;locus_tag=A3216_02585;product=allophanate hydrolase;protein_id=OAX72079.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 209269 209817 . + . ID=gene-A3216_02590;Name=A3216_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02590 GCA_001648835.1|LVXE01000003.1 Protein Homology CDS 209269 209817 . + 0 ID=cds-OAX72080.1;Parent=gene-A3216_02590;Dbxref=NCBI_GP:OAX72080.1;Name=OAX72080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908954.1;locus_tag=A3216_02590;product=aminoglycoside N-acetyltransferase AAC(2')-Ie;protein_id=OAX72080.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 210031 210402 . - . ID=gene-A3216_02595;Name=A3216_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02595 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 210031 210402 . - 0 ID=cds-OAX72081.1;Parent=gene-A3216_02595;Dbxref=NCBI_GP:OAX72081.1;Name=OAX72081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02595;product=hypothetical protein;protein_id=OAX72081.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 210416 210610 . + . ID=gene-A3216_02600;Name=A3216_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02600 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 210416 210610 . + 0 ID=cds-OAX72082.1;Parent=gene-A3216_02600;Dbxref=NCBI_GP:OAX72082.1;Name=OAX72082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02600;product=hypothetical protein;protein_id=OAX72082.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 211098 211751 . + . ID=gene-A3216_02605;Name=A3216_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02605 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 211098 211751 . + 0 ID=cds-OAX72083.1;Parent=gene-A3216_02605;Dbxref=NCBI_GP:OAX72083.1;Name=OAX72083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02605;product=hypothetical protein;protein_id=OAX72083.1;transl_table=11 GCA_001648835.1|LVXE01000003.1 Genbank gene 212616 212945 . - . ID=gene-A3216_02610;Name=A3216_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02610 GCA_001648835.1|LVXE01000003.1 GeneMarkS+ CDS 212616 212945 . - 0 ID=cds-OAX72084.1;Parent=gene-A3216_02610;Dbxref=NCBI_GP:OAX72084.1;Name=OAX72084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02610;product=hypothetical protein;protein_id=OAX72084.1;transl_table=11 ##sequence-region LVXE01000030.1 1 34803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000030.1 Genbank region 1 34803 . + . ID=LVXE01000030.1:1..34803;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000030.1 Genbank gene 82 411 . + . ID=gene-A3216_08815;Name=A3216_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08815 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 82 411 . + 0 ID=cds-OAX70929.1;Parent=gene-A3216_08815;Dbxref=NCBI_GP:OAX70929.1;Name=OAX70929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08815;product=hypothetical protein;protein_id=OAX70929.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 685 951 . + . ID=gene-A3216_08820;Name=A3216_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08820 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 685 951 . + 0 ID=cds-OAX70930.1;Parent=gene-A3216_08820;Dbxref=NCBI_GP:OAX70930.1;Name=OAX70930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08820;product=hypothetical protein;protein_id=OAX70930.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 1417 1608 . + . ID=gene-A3216_08825;Name=A3216_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08825 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 1417 1608 . + 0 ID=cds-OAX70931.1;Parent=gene-A3216_08825;Dbxref=NCBI_GP:OAX70931.1;Name=OAX70931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08825;product=hypothetical protein;protein_id=OAX70931.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 1669 1872 . - . ID=gene-A3216_08830;Name=A3216_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08830 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 1669 1872 . - 0 ID=cds-OAX70932.1;Parent=gene-A3216_08830;Dbxref=NCBI_GP:OAX70932.1;Name=OAX70932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08830;product=hypothetical protein;protein_id=OAX70932.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 2687 2759 . - . ID=gene-A3216_08835;Name=A3216_08835;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08835 GCA_001648835.1|LVXE01000030.1 tRNAscan-SE tRNA 2687 2759 . - . ID=rna-A3216_08835;Parent=gene-A3216_08835;anticodon=(pos:complement(2724..2726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08835;product=tRNA-Lys GCA_001648835.1|LVXE01000030.1 tRNAscan-SE exon 2687 2759 . - . ID=exon-A3216_08835-1;Parent=rna-A3216_08835;anticodon=(pos:complement(2724..2726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08835;product=tRNA-Lys GCA_001648835.1|LVXE01000030.1 Genbank gene 2883 2955 . + . ID=gene-A3216_08840;Name=A3216_08840;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08840 GCA_001648835.1|LVXE01000030.1 tRNAscan-SE tRNA 2883 2955 . + . ID=rna-A3216_08840;Parent=gene-A3216_08840;anticodon=(pos:2917..2919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08840;product=tRNA-Glu GCA_001648835.1|LVXE01000030.1 tRNAscan-SE exon 2883 2955 . + . ID=exon-A3216_08840-1;Parent=rna-A3216_08840;anticodon=(pos:2917..2919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08840;product=tRNA-Glu GCA_001648835.1|LVXE01000030.1 Genbank gene 2986 3062 . + . ID=gene-A3216_08845;Name=A3216_08845;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08845 GCA_001648835.1|LVXE01000030.1 tRNAscan-SE tRNA 2986 3062 . + . ID=rna-A3216_08845;Parent=gene-A3216_08845;anticodon=(pos:3020..3022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08845;product=tRNA-Asp GCA_001648835.1|LVXE01000030.1 tRNAscan-SE exon 2986 3062 . + . ID=exon-A3216_08845-1;Parent=rna-A3216_08845;anticodon=(pos:3020..3022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08845;product=tRNA-Asp GCA_001648835.1|LVXE01000030.1 Genbank gene 3091 3167 . + . ID=gene-A3216_08850;Name=A3216_08850;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_08850 GCA_001648835.1|LVXE01000030.1 tRNAscan-SE tRNA 3091 3167 . + . ID=rna-A3216_08850;Parent=gene-A3216_08850;anticodon=(pos:3125..3127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08850;product=tRNA-Phe GCA_001648835.1|LVXE01000030.1 tRNAscan-SE exon 3091 3167 . + . ID=exon-A3216_08850-1;Parent=rna-A3216_08850;anticodon=(pos:3125..3127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_08850;product=tRNA-Phe GCA_001648835.1|LVXE01000030.1 Genbank pseudogene 3226 4272 . - . ID=gene-A3216_08855;Name=A3216_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08855;pseudo=true GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 3226 4272 . - 0 ID=cds-A3216_08855;Parent=gene-A3216_08855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381796.1;locus_tag=A3216_08855;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 7703 7954 . + . ID=gene-A3216_08860;Name=A3216_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08860 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 7703 7954 . + 0 ID=cds-OAX70933.1;Parent=gene-A3216_08860;Dbxref=NCBI_GP:OAX70933.1;Name=OAX70933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908750.1;locus_tag=A3216_08860;product=hypothetical protein;protein_id=OAX70933.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 8195 9148 . + . ID=gene-A3216_08865;Name=A3216_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08865 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 8195 9148 . + 0 ID=cds-OAX70934.1;Parent=gene-A3216_08865;Dbxref=NCBI_GP:OAX70934.1;Name=OAX70934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908749.1;locus_tag=A3216_08865;product=uridine phosphorylase;protein_id=OAX70934.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 9301 9558 . - . ID=gene-A3216_08870;Name=A3216_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08870 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 9301 9558 . - 0 ID=cds-OAX70935.1;Parent=gene-A3216_08870;Dbxref=NCBI_GP:OAX70935.1;Name=OAX70935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908748.1;locus_tag=A3216_08870;product=hypothetical protein;protein_id=OAX70935.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 10080 10271 . + . ID=gene-A3216_08875;Name=A3216_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08875 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 10080 10271 . + 0 ID=cds-OAX70936.1;Parent=gene-A3216_08875;Dbxref=NCBI_GP:OAX70936.1;Name=OAX70936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08875;product=hypothetical protein;protein_id=OAX70936.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 10830 11066 . + . ID=gene-A3216_08880;Name=A3216_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08880 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 10830 11066 . + 0 ID=cds-OAX70937.1;Parent=gene-A3216_08880;Dbxref=NCBI_GP:OAX70937.1;Name=OAX70937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08880;product=hypothetical protein;protein_id=OAX70937.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 11200 11604 . - . ID=gene-A3216_08885;Name=A3216_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08885 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 11200 11604 . - 0 ID=cds-OAX70938.1;Parent=gene-A3216_08885;Dbxref=NCBI_GP:OAX70938.1;Name=OAX70938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908747.1;locus_tag=A3216_08885;product=cytidine deaminase;protein_id=OAX70938.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 13158 13343 . - . ID=gene-A3216_08890;Name=A3216_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08890 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 13158 13343 . - 0 ID=cds-OAX70939.1;Parent=gene-A3216_08890;Dbxref=NCBI_GP:OAX70939.1;Name=OAX70939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08890;product=hypothetical protein;protein_id=OAX70939.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 13333 13725 . - . ID=gene-A3216_08895;Name=A3216_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08895 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 13333 13725 . - 0 ID=cds-OAX70940.1;Parent=gene-A3216_08895;Dbxref=NCBI_GP:OAX70940.1;Name=OAX70940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08895;product=hypothetical protein;protein_id=OAX70940.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 14139 14495 . - . ID=gene-A3216_08900;Name=A3216_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08900 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 14139 14495 . - 0 ID=cds-OAX70941.1;Parent=gene-A3216_08900;Dbxref=NCBI_GP:OAX70941.1;Name=OAX70941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908746.1;locus_tag=A3216_08900;product=hypothetical protein;protein_id=OAX70941.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank pseudogene 15012 16600 . - . ID=gene-A3216_08905;Name=A3216_08905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08905;pseudo=true GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 15012 16600 . - 0 ID=cds-A3216_08905;Parent=gene-A3216_08905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019306015.1;locus_tag=A3216_08905;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank pseudogene 16877 18016 . + . ID=gene-A3216_08910;Name=A3216_08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08910;pseudo=true GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 16877 18016 . + 0 ID=cds-A3216_08910;Parent=gene-A3216_08910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014212313.1;locus_tag=A3216_08910;product=amidohydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 18073 18279 . + . ID=gene-A3216_08915;Name=A3216_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08915 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 18073 18279 . + 0 ID=cds-OAX70942.1;Parent=gene-A3216_08915;Dbxref=NCBI_GP:OAX70942.1;Name=OAX70942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08915;product=hypothetical protein;protein_id=OAX70942.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 18309 18533 . + . ID=gene-A3216_08920;Name=A3216_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08920 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 18309 18533 . + 0 ID=cds-OAX70943.1;Parent=gene-A3216_08920;Dbxref=NCBI_GP:OAX70943.1;Name=OAX70943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908745.1;locus_tag=A3216_08920;product=hypothetical protein;protein_id=OAX70943.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 18871 19119 . - . ID=gene-A3216_08925;Name=A3216_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08925 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 18871 19119 . - 0 ID=cds-OAX70944.1;Parent=gene-A3216_08925;Dbxref=NCBI_GP:OAX70944.1;Name=OAX70944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08925;product=hypothetical protein;protein_id=OAX70944.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 20068 21777 . - . ID=gene-A3216_08930;Name=A3216_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08930 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 20068 21777 . - 0 ID=cds-OAX70945.1;Parent=gene-A3216_08930;Dbxref=NCBI_GP:OAX70945.1;Name=OAX70945.1;Note=thiamindiphosphate-dependent%3B catalyzes the formation of indoleacetaldehyde from indolepyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBD6.1;locus_tag=A3216_08930;product=indolepyruvate decarboxylase;protein_id=OAX70945.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank pseudogene 22273 23033 . + . ID=gene-A3216_08935;Name=A3216_08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08935;pseudo=true GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 22273 23033 . + 0 ID=cds-A3216_08935;Parent=gene-A3216_08935;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015357124.1;locus_tag=A3216_08935;product=carnitine dehydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank pseudogene 23873 24968 . - . ID=gene-A3216_08940;Name=A3216_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_08940;pseudo=true GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 23873 24968 . - 0 ID=cds-A3216_08940;Parent=gene-A3216_08940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015626949.1;locus_tag=A3216_08940;product=aminotransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 25221 26432 . + . ID=gene-A3216_08945;Name=A3216_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08945 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 25221 26432 . + 0 ID=cds-OAX70946.1;Parent=gene-A3216_08945;Dbxref=NCBI_GP:OAX70946.1;Name=OAX70946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007777222.1;locus_tag=A3216_08945;product=acetyl-CoA acetyltransferase;protein_id=OAX70946.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 26437 28581 . + . ID=gene-A3216_08950;Name=A3216_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08950 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 26437 28581 . + 0 ID=cds-OAX70947.1;Parent=gene-A3216_08950;Dbxref=NCBI_GP:OAX70947.1;Name=OAX70947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908742.1;locus_tag=A3216_08950;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=OAX70947.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 28688 28975 . - . ID=gene-A3216_08955;Name=A3216_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08955 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 28688 28975 . - 0 ID=cds-OAX70948.1;Parent=gene-A3216_08955;Dbxref=NCBI_GP:OAX70948.1;Name=OAX70948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08955;product=hypothetical protein;protein_id=OAX70948.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 30663 31070 . - . ID=gene-A3216_08960;Name=A3216_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08960 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 30663 31070 . - 0 ID=cds-OAX70949.1;Parent=gene-A3216_08960;Dbxref=NCBI_GP:OAX70949.1;Name=OAX70949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08960;product=hypothetical protein;protein_id=OAX70949.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 32053 32283 . - . ID=gene-A3216_08965;Name=A3216_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08965 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 32053 32283 . - 0 ID=cds-OAX70950.1;Parent=gene-A3216_08965;Dbxref=NCBI_GP:OAX70950.1;Name=OAX70950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08965;product=hypothetical protein;protein_id=OAX70950.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 32448 32675 . + . ID=gene-A3216_08970;Name=A3216_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08970 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 32448 32675 . + 0 ID=cds-OAX70951.1;Parent=gene-A3216_08970;Dbxref=NCBI_GP:OAX70951.1;Name=OAX70951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08970;product=hypothetical protein;protein_id=OAX70951.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 32672 32917 . + . ID=gene-A3216_08975;Name=A3216_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08975 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 32672 32917 . + 0 ID=cds-OAX70952.1;Parent=gene-A3216_08975;Dbxref=NCBI_GP:OAX70952.1;Name=OAX70952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08975;product=hypothetical protein;protein_id=OAX70952.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 33311 33505 . + . ID=gene-A3216_08980;Name=A3216_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08980 GCA_001648835.1|LVXE01000030.1 GeneMarkS+ CDS 33311 33505 . + 0 ID=cds-OAX70953.1;Parent=gene-A3216_08980;Dbxref=NCBI_GP:OAX70953.1;Name=OAX70953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08980;product=hypothetical protein;protein_id=OAX70953.1;transl_table=11 GCA_001648835.1|LVXE01000030.1 Genbank gene 34148 34624 . + . ID=gene-A3216_08985;Name=A3216_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08985 GCA_001648835.1|LVXE01000030.1 Protein Homology CDS 34148 34624 . + 0 ID=cds-OAX70954.1;Parent=gene-A3216_08985;Dbxref=NCBI_GP:OAX70954.1;Name=OAX70954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907726.1;locus_tag=A3216_08985;product=hypothetical protein;protein_id=OAX70954.1;transl_table=11 ##sequence-region LVXE01000031.1 1 33533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000031.1 Genbank region 1 33533 . + . ID=LVXE01000031.1:1..33533;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000031.1 Genbank gene 207 470 . + . ID=gene-A3216_08990;Name=A3216_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08990 GCA_001648835.1|LVXE01000031.1 GeneMarkS+ CDS 207 470 . + 0 ID=cds-OAX70905.1;Parent=gene-A3216_08990;Dbxref=NCBI_GP:OAX70905.1;Name=OAX70905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08990;product=hypothetical protein;protein_id=OAX70905.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 484 690 . + . ID=gene-A3216_08995;Name=A3216_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_08995 GCA_001648835.1|LVXE01000031.1 GeneMarkS+ CDS 484 690 . + 0 ID=cds-OAX70906.1;Parent=gene-A3216_08995;Dbxref=NCBI_GP:OAX70906.1;Name=OAX70906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_08995;product=hypothetical protein;protein_id=OAX70906.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 1428 2786 . + . ID=gene-A3216_09000;Name=A3216_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09000 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 1428 2786 . + 0 ID=cds-OAX70907.1;Parent=gene-A3216_09000;Dbxref=NCBI_GP:OAX70907.1;Name=OAX70907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014385124.1;locus_tag=A3216_09000;product=histidinol dehydrogenase;protein_id=OAX70907.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 2783 3916 . + . ID=gene-A3216_09005;Name=A3216_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09005 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 2783 3916 . + 0 ID=cds-OAX70908.1;Parent=gene-A3216_09005;Dbxref=NCBI_GP:OAX70908.1;Name=OAX70908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7B8.1;locus_tag=A3216_09005;product=histidinol-phosphate transaminase;protein_id=OAX70908.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 3913 4545 . + . ID=gene-A3216_09010;Name=A3216_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09010 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 3913 4545 . + 0 ID=cds-OAX70909.1;Parent=gene-A3216_09010;Dbxref=NCBI_GP:OAX70909.1;Name=OAX70909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7B9.1;locus_tag=A3216_09010;product=imidazoleglycerol-phosphate dehydratase;protein_id=OAX70909.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 4542 5162 . + . ID=gene-A3216_09015;Name=A3216_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09015 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 4542 5162 . + 0 ID=cds-OAX70910.1;Parent=gene-A3216_09015;Dbxref=NCBI_GP:OAX70910.1;Name=OAX70910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7C0.1;locus_tag=A3216_09015;product=imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit;protein_id=OAX70910.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 5175 5909 . + . ID=gene-A3216_09020;Name=A3216_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09020 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 5175 5909 . + 0 ID=cds-OAX70926.1;Parent=gene-A3216_09020;Dbxref=NCBI_GP:OAX70926.1;Name=OAX70926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC56.2;locus_tag=A3216_09020;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=OAX70926.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 5917 6730 . + . ID=gene-A3216_09025;Name=A3216_09025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09025;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 5917 6730 . + 0 ID=cds-A3216_09025;Parent=gene-A3216_09025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169682.1;locus_tag=A3216_09025;product=inositol monophosphatase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 6717 7502 . + . ID=gene-A3216_09030;Name=A3216_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09030 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 6717 7502 . + 0 ID=cds-OAX70911.1;Parent=gene-A3216_09030;Dbxref=NCBI_GP:OAX70911.1;Name=OAX70911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7C2.1;locus_tag=A3216_09030;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=OAX70911.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 7499 7846 . + . ID=gene-A3216_09035;Name=A3216_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09035 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 7499 7846 . + 0 ID=cds-OAX70912.1;Parent=gene-A3216_09035;Dbxref=NCBI_GP:OAX70912.1;Name=OAX70912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7C3.1;locus_tag=A3216_09035;product=phosphoribosyl-AMP cyclohydrolase;protein_id=OAX70912.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 8337 8540 . + . ID=gene-A3216_09040;Name=A3216_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09040 GCA_001648835.1|LVXE01000031.1 GeneMarkS+ CDS 8337 8540 . + 0 ID=cds-OAX70913.1;Parent=gene-A3216_09040;Dbxref=NCBI_GP:OAX70913.1;Name=OAX70913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09040;product=hypothetical protein;protein_id=OAX70913.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 9580 10674 . + . ID=gene-A3216_09045;Name=A3216_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09045 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 9580 10674 . + 0 ID=cds-OAX70914.1;Parent=gene-A3216_09045;Dbxref=NCBI_GP:OAX70914.1;Name=OAX70914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908234.1;locus_tag=A3216_09045;product=ionic transporter y4hA;protein_id=OAX70914.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 10706 11170 . - . ID=gene-A3216_09050;Name=A3216_09050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09050;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 10706 11170 . - 0 ID=cds-A3216_09050;Parent=gene-A3216_09050;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019737747.1;locus_tag=A3216_09050;product=peroxiredoxin;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 11279 12868 . + . ID=gene-A3216_09055;Name=A3216_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09055 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 11279 12868 . + 0 ID=cds-OAX70915.1;Parent=gene-A3216_09055;Dbxref=NCBI_GP:OAX70915.1;Name=OAX70915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7C5.1;locus_tag=A3216_09055;product=anthranilate synthase component I;protein_id=OAX70915.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 12865 13662 . + . ID=gene-A3216_09060;Name=A3216_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09060 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 12865 13662 . + 0 ID=cds-OAX70916.1;Parent=gene-A3216_09060;Dbxref=NCBI_GP:OAX70916.1;Name=OAX70916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908236.1;locus_tag=A3216_09060;product=hypothetical protein;protein_id=OAX70916.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 13640 14458 . + . ID=gene-A3216_09065;Name=A3216_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09065 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 13640 14458 . + 0 ID=cds-OAX70917.1;Parent=gene-A3216_09065;Dbxref=NCBI_GP:OAX70917.1;Name=OAX70917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815791.1;locus_tag=A3216_09065;product=indole-3-glycerol phosphate synthase;protein_id=OAX70917.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 14525 15775 . + . ID=gene-A3216_09070;Name=A3216_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09070 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 14525 15775 . + 0 ID=cds-OAX70927.1;Parent=gene-A3216_09070;Dbxref=NCBI_GP:OAX70927.1;Name=OAX70927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008257756.1;locus_tag=A3216_09070;product=tryptophan synthase subunit beta;protein_id=OAX70927.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 15772 16584 . + . ID=gene-A3216_09075;Name=A3216_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09075 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 15772 16584 . + 0 ID=cds-OAX70928.1;Parent=gene-A3216_09075;Dbxref=NCBI_GP:OAX70928.1;Name=OAX70928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC53.1;locus_tag=A3216_09075;product=tryptophan synthase subunit alpha;protein_id=OAX70928.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 16581 17573 . + . ID=gene-A3216_09080;Name=A3216_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09080 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 16581 17573 . + 0 ID=cds-OAX70918.1;Parent=gene-A3216_09080;Dbxref=NCBI_GP:OAX70918.1;Name=OAX70918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC52.1;locus_tag=A3216_09080;product=prolipoprotein diacylglyceryl transferase;protein_id=OAX70918.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 17570 17806 . + . ID=gene-A3216_09085;Name=A3216_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09085 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 17570 17806 . + 0 ID=cds-OAX70919.1;Parent=gene-A3216_09085;Dbxref=NCBI_GP:OAX70919.1;Name=OAX70919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908241.1;locus_tag=A3216_09085;product=hypothetical protein;protein_id=OAX70919.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 17925 18368 . + . ID=gene-A3216_09090;Name=A3216_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09090 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 17925 18368 . + 0 ID=cds-OAX70920.1;Parent=gene-A3216_09090;Dbxref=NCBI_GP:OAX70920.1;Name=OAX70920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009938400.1;locus_tag=A3216_09090;product=hypothetical protein;protein_id=OAX70920.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 18358 18798 . + . ID=gene-A3216_09095;Name=A3216_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09095 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 18358 18798 . + 0 ID=cds-OAX70921.1;Parent=gene-A3216_09095;Dbxref=NCBI_GP:OAX70921.1;Name=OAX70921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908242.1;locus_tag=A3216_09095;product=hypothetical protein;protein_id=OAX70921.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 18881 20299 . + . ID=gene-A3216_09100;Name=A3216_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09100 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 18881 20299 . + 0 ID=cds-OAX70922.1;Parent=gene-A3216_09100;Dbxref=NCBI_GP:OAX70922.1;Name=OAX70922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003886189.1;locus_tag=A3216_09100;product=pyruvate kinase;protein_id=OAX70922.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 20393 21298 . + . ID=gene-A3216_09105;Name=A3216_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09105 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 20393 21298 . + 0 ID=cds-OAX70923.1;Parent=gene-A3216_09105;Dbxref=NCBI_GP:OAX70923.1;Name=OAX70923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908244.1;locus_tag=A3216_09105;product=acyl-CoA thioesterase II;protein_id=OAX70923.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 21471 22742 . + . ID=gene-A3216_09110;Name=A3216_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09110;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 21471 22742 . + 0 ID=cds-A3216_09110;Parent=gene-A3216_09110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725301.1;locus_tag=A3216_09110;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 23154 23441 . + . ID=gene-A3216_09115;Name=A3216_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09115 GCA_001648835.1|LVXE01000031.1 GeneMarkS+ CDS 23154 23441 . + 0 ID=cds-OAX70924.1;Parent=gene-A3216_09115;Dbxref=NCBI_GP:OAX70924.1;Name=OAX70924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09115;product=hypothetical protein;protein_id=OAX70924.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 23466 25096 . - . ID=gene-A3216_09120;Name=A3216_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09120;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 23466 25096 . - 0 ID=cds-A3216_09120;Parent=gene-A3216_09120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787682.1;locus_tag=A3216_09120;product=thiol reductant ABC exporter subunit CydC;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 25228 26808 . - . ID=gene-A3216_09125;Name=A3216_09125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09125;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 25228 26808 . - 0 ID=cds-A3216_09125;Parent=gene-A3216_09125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014000853.1;locus_tag=A3216_09125;product=thiol reductant ABC exporter subunit CydD;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 26910 27931 . - . ID=gene-A3216_09130;Name=A3216_09130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09130;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 26910 27931 . - 0 ID=cds-A3216_09130;Parent=gene-A3216_09130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014815805.1;locus_tag=A3216_09130;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 27963 29283 . - . ID=gene-A3216_09135;Name=A3216_09135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09135;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 27963 29283 . - 0 ID=cds-A3216_09135;Parent=gene-A3216_09135;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007776151.1;locus_tag=A3216_09135;product=cytochrome BD ubiquinol oxidase subunit I;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 29430 30660 . - . ID=gene-A3216_09140;Name=A3216_09140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09140;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 29430 30660 . - 0 ID=cds-A3216_09140;Parent=gene-A3216_09140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003901209.1;locus_tag=A3216_09140;product=adenylate cyclase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank gene 30837 30913 . - . ID=gene-A3216_09145;Name=A3216_09145;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_09145 GCA_001648835.1|LVXE01000031.1 tRNAscan-SE tRNA 30837 30913 . - . ID=rna-A3216_09145;Parent=gene-A3216_09145;anticodon=(pos:complement(30877..30879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_09145;product=tRNA-Leu GCA_001648835.1|LVXE01000031.1 tRNAscan-SE exon 30837 30913 . - . ID=exon-A3216_09145-1;Parent=rna-A3216_09145;anticodon=(pos:complement(30877..30879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_09145;product=tRNA-Leu GCA_001648835.1|LVXE01000031.1 Genbank gene 31006 31623 . + . ID=gene-A3216_09150;Name=A3216_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09150 GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 31006 31623 . + 0 ID=cds-OAX70925.1;Parent=gene-A3216_09150;Dbxref=NCBI_GP:OAX70925.1;Name=OAX70925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908245.1;locus_tag=A3216_09150;product=transcriptional regulator;protein_id=OAX70925.1;transl_table=11 GCA_001648835.1|LVXE01000031.1 Genbank pseudogene 31697 32849 . - . ID=gene-A3216_09155;Name=A3216_09155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09155;pseudo=true GCA_001648835.1|LVXE01000031.1 Protein Homology CDS 31697 32849 . - 0 ID=cds-A3216_09155;Parent=gene-A3216_09155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627912.1;locus_tag=A3216_09155;product=lipid-transfer protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000032.1 1 33270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000032.1 Genbank region 1 33270 . + . ID=LVXE01000032.1:1..33270;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000032.1 Genbank gene 59 340 . - . ID=gene-A3216_09160;Name=A3216_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09160 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 59 340 . - 0 ID=cds-OAX70877.1;Parent=gene-A3216_09160;Dbxref=NCBI_GP:OAX70877.1;Name=OAX70877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09160;product=hypothetical protein;protein_id=OAX70877.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 1444 1740 . + . ID=gene-A3216_09165;Name=A3216_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09165 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 1444 1740 . + 0 ID=cds-OAX70878.1;Parent=gene-A3216_09165;Dbxref=NCBI_GP:OAX70878.1;Name=OAX70878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908035.1;locus_tag=A3216_09165;product=hypothetical protein;protein_id=OAX70878.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 1737 1979 . + . ID=gene-A3216_09170;Name=A3216_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09170 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 1737 1979 . + 0 ID=cds-OAX70879.1;Parent=gene-A3216_09170;Dbxref=NCBI_GP:OAX70879.1;Name=OAX70879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908036.1;locus_tag=A3216_09170;product=hypothetical protein;protein_id=OAX70879.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 2774 3086 . + . ID=gene-A3216_09175;Name=A3216_09175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09175;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 2774 3086 . + 0 ID=cds-A3216_09175;Parent=gene-A3216_09175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017981684.1;locus_tag=A3216_09175;product=antibiotic biosynthesis monooxygenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 3111 3780 . - . ID=gene-A3216_09180;Name=A3216_09180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09180;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 3111 3780 . - 0 ID=cds-A3216_09180;Parent=gene-A3216_09180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011738534.1;locus_tag=A3216_09180;product=guanylate cyclase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 4285 5644 . + . ID=gene-A3216_09185;Name=A3216_09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09185;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 4285 5644 . + 0 ID=cds-A3216_09185;Parent=gene-A3216_09185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020726327.1;locus_tag=A3216_09185;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 5715 6694 . + . ID=gene-A3216_09190;Name=A3216_09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09190;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 5715 6694 . + 0 ID=cds-A3216_09190;Parent=gene-A3216_09190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379391.1;locus_tag=A3216_09190;product=6-phosphogluconate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 6836 7039 . - . ID=gene-A3216_09195;Name=A3216_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09195 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 6836 7039 . - 0 ID=cds-OAX70880.1;Parent=gene-A3216_09195;Dbxref=NCBI_GP:OAX70880.1;Name=OAX70880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09195;product=hypothetical protein;protein_id=OAX70880.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 7782 8102 . + . ID=gene-A3216_09200;Name=A3216_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09200 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 7782 8102 . + 0 ID=cds-OAX70881.1;Parent=gene-A3216_09200;Dbxref=NCBI_GP:OAX70881.1;Name=OAX70881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09200;product=hypothetical protein;protein_id=OAX70881.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 8753 9079 . + . ID=gene-A3216_09205;Name=A3216_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09205 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 8753 9079 . + 0 ID=cds-OAX70882.1;Parent=gene-A3216_09205;Dbxref=NCBI_GP:OAX70882.1;Name=OAX70882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09205;product=hypothetical protein;protein_id=OAX70882.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 9069 9326 . - . ID=gene-A3216_09210;Name=A3216_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09210 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 9069 9326 . - 0 ID=cds-OAX70883.1;Parent=gene-A3216_09210;Dbxref=NCBI_GP:OAX70883.1;Name=OAX70883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908038.1;locus_tag=A3216_09210;product=hypothetical protein;protein_id=OAX70883.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 9593 10107 . + . ID=gene-A3216_09215;Name=A3216_09215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09215;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 9593 10107 . + 0 ID=cds-A3216_09215;Parent=gene-A3216_09215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011892986.1;locus_tag=A3216_09215;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 10279 10692 . - . ID=gene-A3216_09220;Name=A3216_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09220 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 10279 10692 . - 0 ID=cds-OAX70884.1;Parent=gene-A3216_09220;Dbxref=NCBI_GP:OAX70884.1;Name=OAX70884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908039.1;locus_tag=A3216_09220;product=hypothetical protein;protein_id=OAX70884.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 10704 10904 . - . ID=gene-A3216_09225;Name=A3216_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09225 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 10704 10904 . - 0 ID=cds-OAX70885.1;Parent=gene-A3216_09225;Dbxref=NCBI_GP:OAX70885.1;Name=OAX70885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908040.1;locus_tag=A3216_09225;product=hypothetical protein;protein_id=OAX70885.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 10931 11833 . + . ID=gene-A3216_09230;Name=A3216_09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09230;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 10931 11833 . + 0 ID=cds-A3216_09230;Parent=gene-A3216_09230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381978.1;locus_tag=A3216_09230;product=epoxide hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 12167 12358 . + . ID=gene-A3216_09235;Name=A3216_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09235 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 12167 12358 . + 0 ID=cds-OAX70886.1;Parent=gene-A3216_09235;Dbxref=NCBI_GP:OAX70886.1;Name=OAX70886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09235;product=hypothetical protein;protein_id=OAX70886.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 12359 12586 . + . ID=gene-A3216_09240;Name=A3216_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09240 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 12359 12586 . + 0 ID=cds-OAX70887.1;Parent=gene-A3216_09240;Dbxref=NCBI_GP:OAX70887.1;Name=OAX70887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09240;product=hypothetical protein;protein_id=OAX70887.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 12745 13011 . + . ID=gene-A3216_09245;Name=A3216_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09245 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 12745 13011 . + 0 ID=cds-OAX70888.1;Parent=gene-A3216_09245;Dbxref=NCBI_GP:OAX70888.1;Name=OAX70888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09245;product=hypothetical protein;protein_id=OAX70888.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 13442 13681 . + . ID=gene-A3216_09250;Name=A3216_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09250 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 13442 13681 . + 0 ID=cds-OAX70889.1;Parent=gene-A3216_09250;Dbxref=NCBI_GP:OAX70889.1;Name=OAX70889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908041.1;locus_tag=A3216_09250;product=hypothetical protein;protein_id=OAX70889.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 13965 14569 . - . ID=gene-A3216_09255;Name=A3216_09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09255;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 13965 14569 . - 0 ID=cds-A3216_09255;Parent=gene-A3216_09255;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254409.1;locus_tag=A3216_09255;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 14566 16371 . - . ID=gene-A3216_09260;Name=A3216_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09260 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 14566 16371 . - 0 ID=cds-OAX70890.1;Parent=gene-A3216_09260;Dbxref=NCBI_GP:OAX70890.1;Name=OAX70890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908042.1;locus_tag=A3216_09260;product=pyruvate%2C phosphate dikinase;protein_id=OAX70890.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 16416 16925 . + . ID=gene-A3216_09265;Name=A3216_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09265 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 16416 16925 . + 0 ID=cds-OAX70891.1;Parent=gene-A3216_09265;Dbxref=NCBI_GP:OAX70891.1;Name=OAX70891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908043.1;locus_tag=A3216_09265;product=DoxX family protein;protein_id=OAX70891.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 16895 17266 . - . ID=gene-A3216_09270;Name=A3216_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09270 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 16895 17266 . - 0 ID=cds-OAX70892.1;Parent=gene-A3216_09270;Dbxref=NCBI_GP:OAX70892.1;Name=OAX70892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09270;product=hypothetical protein;protein_id=OAX70892.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 17403 17777 . - . ID=gene-A3216_09275;Name=A3216_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09275 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 17403 17777 . - 0 ID=cds-OAX70893.1;Parent=gene-A3216_09275;Dbxref=NCBI_GP:OAX70893.1;Name=OAX70893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908044.1;locus_tag=A3216_09275;product=hypothetical protein;protein_id=OAX70893.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 17788 18219 . + . ID=gene-A3216_09280;Name=A3216_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09280 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 17788 18219 . + 0 ID=cds-OAX70894.1;Parent=gene-A3216_09280;Dbxref=NCBI_GP:OAX70894.1;Name=OAX70894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908045.1;locus_tag=A3216_09280;product=hypothetical protein;protein_id=OAX70894.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 18461 18814 . + . ID=gene-A3216_09285;Name=A3216_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09285 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 18461 18814 . + 0 ID=cds-OAX70895.1;Parent=gene-A3216_09285;Dbxref=NCBI_GP:OAX70895.1;Name=OAX70895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908046.1;locus_tag=A3216_09285;product=hypothetical protein;protein_id=OAX70895.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 18907 19110 . + . ID=gene-A3216_09290;Name=A3216_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09290 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 18907 19110 . + 0 ID=cds-OAX70896.1;Parent=gene-A3216_09290;Dbxref=NCBI_GP:OAX70896.1;Name=OAX70896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09290;product=hypothetical protein;protein_id=OAX70896.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 19326 21608 . - . ID=gene-A3216_09295;Name=A3216_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09295 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 19326 21608 . - 0 ID=cds-OAX70897.1;Parent=gene-A3216_09295;Dbxref=NCBI_GP:OAX70897.1;Name=OAX70897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05564.1;locus_tag=A3216_09295;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=OAX70897.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 cmsearch binding_site 21751 21970 . - . ID=id-LVXE01000032.1:21751..21970;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001648835.1|LVXE01000032.1 Genbank gene 22847 23311 . + . ID=gene-A3216_09300;Name=A3216_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09300 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 22847 23311 . + 0 ID=cds-OAX70898.1;Parent=gene-A3216_09300;Dbxref=NCBI_GP:OAX70898.1;Name=OAX70898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908048.1;locus_tag=A3216_09300;product=hypothetical protein;protein_id=OAX70898.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 23349 23606 . + . ID=gene-A3216_09305;Name=A3216_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09305 GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 23349 23606 . + 0 ID=cds-OAX70899.1;Parent=gene-A3216_09305;Dbxref=NCBI_GP:OAX70899.1;Name=OAX70899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908049.1;locus_tag=A3216_09305;product=hypothetical protein;protein_id=OAX70899.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 24056 24253 . - . ID=gene-A3216_09310;Name=A3216_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09310 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 24056 24253 . - 0 ID=cds-OAX70900.1;Parent=gene-A3216_09310;Dbxref=NCBI_GP:OAX70900.1;Name=OAX70900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09310;product=hypothetical protein;protein_id=OAX70900.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 25339 26325 . - . ID=gene-A3216_09315;Name=A3216_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09315;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 25339 26325 . - 0 ID=cds-A3216_09315;Parent=gene-A3216_09315;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003405932.1;locus_tag=A3216_09315;product=monooxygenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 26339 26832 . - . ID=gene-A3216_09320;Name=A3216_09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09320;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 26339 26832 . - 0 ID=cds-A3216_09320;Parent=gene-A3216_09320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015289601.1;locus_tag=A3216_09320;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 26856 27925 . - . ID=gene-A3216_09325;Name=A3216_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09325;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 26856 27925 . - 0 ID=cds-A3216_09325;Parent=gene-A3216_09325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395876.1;locus_tag=A3216_09325;product=stilbene synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 28504 28842 . + . ID=gene-A3216_09330;Name=A3216_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09330 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 28504 28842 . + 0 ID=cds-OAX70901.1;Parent=gene-A3216_09330;Dbxref=NCBI_GP:OAX70901.1;Name=OAX70901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09330;product=hypothetical protein;protein_id=OAX70901.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank pseudogene 29066 30153 . + . ID=gene-A3216_09335;Name=A3216_09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09335;pseudo=true GCA_001648835.1|LVXE01000032.1 Protein Homology CDS 29066 30153 . + 0 ID=cds-A3216_09335;Parent=gene-A3216_09335;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015627180.1;locus_tag=A3216_09335;product=carnitine dehydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 31584 31802 . - . ID=gene-A3216_09340;Name=A3216_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09340 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 31584 31802 . - 0 ID=cds-OAX70902.1;Parent=gene-A3216_09340;Dbxref=NCBI_GP:OAX70902.1;Name=OAX70902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09340;product=hypothetical protein;protein_id=OAX70902.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 32380 32559 . + . ID=gene-A3216_09345;Name=A3216_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09345 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 32380 32559 . + 0 ID=cds-OAX70903.1;Parent=gene-A3216_09345;Dbxref=NCBI_GP:OAX70903.1;Name=OAX70903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09345;product=hypothetical protein;protein_id=OAX70903.1;transl_table=11 GCA_001648835.1|LVXE01000032.1 Genbank gene 32802 33032 . + . ID=gene-A3216_09350;Name=A3216_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09350 GCA_001648835.1|LVXE01000032.1 GeneMarkS+ CDS 32802 33032 . + 0 ID=cds-OAX70904.1;Parent=gene-A3216_09350;Dbxref=NCBI_GP:OAX70904.1;Name=OAX70904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09350;product=hypothetical protein;protein_id=OAX70904.1;transl_table=11 ##sequence-region LVXE01000033.1 1 31719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000033.1 Genbank region 1 31719 . + . ID=LVXE01000033.1:1..31719;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000033.1 Genbank gene 1807 2259 . + . ID=gene-A3216_09355;Name=A3216_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09355 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 1807 2259 . + 0 ID=cds-OAX70853.1;Parent=gene-A3216_09355;Dbxref=NCBI_GP:OAX70853.1;Name=OAX70853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09355;product=hypothetical protein;protein_id=OAX70853.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank pseudogene 2411 3297 . + . ID=gene-A3216_09360;Name=A3216_09360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09360;pseudo=true GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 2411 3297 . + 0 ID=cds-A3216_09360;Parent=gene-A3216_09360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020218520.1;locus_tag=A3216_09360;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 4127 5791 . - . ID=gene-A3216_09365;Name=A3216_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09365 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 4127 5791 . - 0 ID=cds-OAX70854.1;Parent=gene-A3216_09365;Dbxref=NCBI_GP:OAX70854.1;Name=OAX70854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907561.1;locus_tag=A3216_09365;product=glucose-6-phosphate isomerase;protein_id=OAX70854.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 6152 6424 . - . ID=gene-A3216_09370;Name=A3216_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09370 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 6152 6424 . - 0 ID=cds-OAX70855.1;Parent=gene-A3216_09370;Dbxref=NCBI_GP:OAX70855.1;Name=OAX70855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254002.1;locus_tag=A3216_09370;product=chorismate mutase;protein_id=OAX70855.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 6978 7166 . + . ID=gene-A3216_09375;Name=A3216_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09375 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 6978 7166 . + 0 ID=cds-OAX70856.1;Parent=gene-A3216_09375;Dbxref=NCBI_GP:OAX70856.1;Name=OAX70856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907563.1;locus_tag=A3216_09375;product=hypothetical protein;protein_id=OAX70856.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 7249 9585 . + . ID=gene-A3216_09380;Name=A3216_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09380 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 7249 9585 . + 0 ID=cds-OAX70857.1;Parent=gene-A3216_09380;Dbxref=NCBI_GP:OAX70857.1;Name=OAX70857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007777004.1;locus_tag=A3216_09380;product=ATP-dependent DNA helicase PcrA;protein_id=OAX70857.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 10137 11138 . - . ID=gene-A3216_09385;Name=A3216_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09385 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 10137 11138 . - 0 ID=cds-OAX70858.1;Parent=gene-A3216_09385;Dbxref=NCBI_GP:OAX70858.1;Name=OAX70858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907565.1;locus_tag=A3216_09385;product=hypothetical protein;protein_id=OAX70858.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 11435 12616 . + . ID=gene-A3216_09390;Name=A3216_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09390 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 11435 12616 . + 0 ID=cds-OAX70859.1;Parent=gene-A3216_09390;Dbxref=NCBI_GP:OAX70859.1;Name=OAX70859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5H8.1;locus_tag=A3216_09390;product=succinate--CoA ligase subunit beta;protein_id=OAX70859.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 12636 13538 . + . ID=gene-A3216_09395;Name=A3216_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09395 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 12636 13538 . + 0 ID=cds-OAX70860.1;Parent=gene-A3216_09395;Dbxref=NCBI_GP:OAX70860.1;Name=OAX70860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019736319.1;locus_tag=A3216_09395;product=succinate--CoA ligase subunit alpha;protein_id=OAX70860.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank pseudogene 13565 14429 . - . ID=gene-A3216_09400;Name=A3216_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09400;pseudo=true GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 13565 14429 . - 0 ID=cds-A3216_09400;Parent=gene-A3216_09400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015309059.1;locus_tag=A3216_09400;product=LLM class F420-dependent oxidoreductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 14685 15578 . + . ID=gene-A3216_09405;Name=A3216_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09405 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 14685 15578 . + 0 ID=cds-OAX70861.1;Parent=gene-A3216_09405;Dbxref=NCBI_GP:OAX70861.1;Name=OAX70861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396095.1;locus_tag=A3216_09405;product=hypothetical protein;protein_id=OAX70861.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 15627 16919 . + . ID=gene-A3216_09410;Name=A3216_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09410 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 15627 16919 . + 0 ID=cds-OAX70862.1;Parent=gene-A3216_09410;Dbxref=NCBI_GP:OAX70862.1;Name=OAX70862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907569.1;locus_tag=A3216_09410;product=hypothetical protein;protein_id=OAX70862.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 16949 17596 . + . ID=gene-A3216_09415;Name=A3216_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09415 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 16949 17596 . + 0 ID=cds-OAX70863.1;Parent=gene-A3216_09415;Dbxref=NCBI_GP:OAX70863.1;Name=OAX70863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907570.1;locus_tag=A3216_09415;product=phosphoribosylglycinamide formyltransferase;protein_id=OAX70863.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 17593 19176 . + . ID=gene-A3216_09420;Name=A3216_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09420 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 17593 19176 . + 0 ID=cds-OAX70864.1;Parent=gene-A3216_09420;Dbxref=NCBI_GP:OAX70864.1;Name=OAX70864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9RAJ5.2;locus_tag=A3216_09420;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=OAX70864.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 19985 20263 . - . ID=gene-A3216_09425;Name=A3216_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09425 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 19985 20263 . - 0 ID=cds-OAX70865.1;Parent=gene-A3216_09425;Dbxref=NCBI_GP:OAX70865.1;Name=OAX70865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907572.1;locus_tag=A3216_09425;product=hypothetical protein;protein_id=OAX70865.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 20468 20689 . + . ID=gene-A3216_09430;Name=A3216_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09430 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 20468 20689 . + 0 ID=cds-OAX70866.1;Parent=gene-A3216_09430;Dbxref=NCBI_GP:OAX70866.1;Name=OAX70866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09430;product=hypothetical protein;protein_id=OAX70866.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 22297 22479 . + . ID=gene-A3216_09435;Name=A3216_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09435 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 22297 22479 . + 0 ID=cds-OAX70867.1;Parent=gene-A3216_09435;Dbxref=NCBI_GP:OAX70867.1;Name=OAX70867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09435;product=hypothetical protein;protein_id=OAX70867.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 25109 25291 . - . ID=gene-A3216_09440;Name=A3216_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09440 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 25109 25291 . - 0 ID=cds-OAX70868.1;Parent=gene-A3216_09440;Dbxref=NCBI_GP:OAX70868.1;Name=OAX70868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09440;product=hypothetical protein;protein_id=OAX70868.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 26021 26350 . - . ID=gene-A3216_09445;Name=A3216_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09445 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 26021 26350 . - 0 ID=cds-OAX70869.1;Parent=gene-A3216_09445;Dbxref=NCBI_GP:OAX70869.1;Name=OAX70869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09445;product=hypothetical protein;protein_id=OAX70869.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank pseudogene 27113 27721 . + . ID=gene-A3216_09450;Name=A3216_09450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09450;pseudo=true GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 27113 27721 . + 0 ID=cds-A3216_09450;Parent=gene-A3216_09450;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379284.1;locus_tag=A3216_09450;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 27905 28507 . + . ID=gene-A3216_09455;Name=A3216_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09455 GCA_001648835.1|LVXE01000033.1 Protein Homology CDS 27905 28507 . + 0 ID=cds-OAX70870.1;Parent=gene-A3216_09455;Dbxref=NCBI_GP:OAX70870.1;Name=OAX70870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907573.1;locus_tag=A3216_09455;product=hypothetical protein;protein_id=OAX70870.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 28628 28840 . + . ID=gene-A3216_09460;Name=A3216_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09460 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 28628 28840 . + 0 ID=cds-OAX70871.1;Parent=gene-A3216_09460;Dbxref=NCBI_GP:OAX70871.1;Name=OAX70871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09460;product=hypothetical protein;protein_id=OAX70871.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 29091 29270 . - . ID=gene-A3216_09465;Name=A3216_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09465 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 29091 29270 . - 0 ID=cds-OAX70872.1;Parent=gene-A3216_09465;Dbxref=NCBI_GP:OAX70872.1;Name=OAX70872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09465;product=hypothetical protein;protein_id=OAX70872.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 29581 29820 . + . ID=gene-A3216_09470;Name=A3216_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09470 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 29581 29820 . + 0 ID=cds-OAX70873.1;Parent=gene-A3216_09470;Dbxref=NCBI_GP:OAX70873.1;Name=OAX70873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09470;product=hypothetical protein;protein_id=OAX70873.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 29932 30153 . + . ID=gene-A3216_09475;Name=A3216_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09475 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 29932 30153 . + 0 ID=cds-OAX70874.1;Parent=gene-A3216_09475;Dbxref=NCBI_GP:OAX70874.1;Name=OAX70874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09475;product=hypothetical protein;protein_id=OAX70874.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 30218 30412 . + . ID=gene-A3216_09480;Name=A3216_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09480 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 30218 30412 . + 0 ID=cds-OAX70875.1;Parent=gene-A3216_09480;Dbxref=NCBI_GP:OAX70875.1;Name=OAX70875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09480;product=hypothetical protein;protein_id=OAX70875.1;transl_table=11 GCA_001648835.1|LVXE01000033.1 Genbank gene 31302 31694 . - . ID=gene-A3216_09485;Name=A3216_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09485 GCA_001648835.1|LVXE01000033.1 GeneMarkS+ CDS 31302 31694 . - 0 ID=cds-OAX70876.1;Parent=gene-A3216_09485;Dbxref=NCBI_GP:OAX70876.1;Name=OAX70876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09485;product=hypothetical protein;protein_id=OAX70876.1;transl_table=11 ##sequence-region LVXE01000034.1 1 31693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000034.1 Genbank region 1 31693 . + . ID=LVXE01000034.1:1..31693;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000034.1 Genbank pseudogene 401 1162 . + . ID=gene-A3216_09490;Name=A3216_09490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09490;pseudo=true GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 401 1162 . + 0 ID=cds-A3216_09490;Parent=gene-A3216_09490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020101366.1;locus_tag=A3216_09490;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank pseudogene 1709 2046 . - . ID=gene-A3216_09495;Name=A3216_09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09495;pseudo=true GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 1709 2046 . - 0 ID=cds-A3216_09495;Parent=gene-A3216_09495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003403448.1;locus_tag=A3216_09495;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 2747 3085 . + . ID=gene-A3216_09500;Name=A3216_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09500 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 2747 3085 . + 0 ID=cds-OAX70826.1;Parent=gene-A3216_09500;Dbxref=NCBI_GP:OAX70826.1;Name=OAX70826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09500;product=hypothetical protein;protein_id=OAX70826.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 4451 4645 . - . ID=gene-A3216_09505;Name=A3216_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09505 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 4451 4645 . - 0 ID=cds-OAX70827.1;Parent=gene-A3216_09505;Dbxref=NCBI_GP:OAX70827.1;Name=OAX70827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09505;product=hypothetical protein;protein_id=OAX70827.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 4958 5332 . + . ID=gene-A3216_09510;Name=A3216_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09510 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 4958 5332 . + 0 ID=cds-OAX70828.1;Parent=gene-A3216_09510;Dbxref=NCBI_GP:OAX70828.1;Name=OAX70828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007078642.1;locus_tag=A3216_09510;product=30S ribosomal protein S12;protein_id=OAX70828.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 5332 5802 . + . ID=gene-A3216_09515;Name=A3216_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09515 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 5332 5802 . + 0 ID=cds-OAX70829.1;Parent=gene-A3216_09515;Dbxref=NCBI_GP:OAX70829.1;Name=OAX70829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245075.1;locus_tag=A3216_09515;product=30S ribosomal protein S7;protein_id=OAX70829.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 5896 8001 . + . ID=gene-A3216_09520;Name=A3216_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09520 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 5896 8001 . + 0 ID=cds-OAX70830.1;Parent=gene-A3216_09520;Dbxref=NCBI_GP:OAX70830.1;Name=OAX70830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383304.1;locus_tag=A3216_09520;product=translation elongation factor G;protein_id=OAX70830.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 8110 9300 . + . ID=gene-A3216_09525;Name=A3216_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09525 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 8110 9300 . + 0 ID=cds-OAX70831.1;Parent=gene-A3216_09525;Dbxref=NCBI_GP:OAX70831.1;Name=OAX70831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006552255.1;locus_tag=A3216_09525;product=translation elongation factor Tu;protein_id=OAX70831.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank pseudogene 9452 10295 . + . ID=gene-A3216_09530;Name=A3216_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09530;pseudo=true GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 9452 10295 . + 0 ID=cds-A3216_09530;Parent=gene-A3216_09530;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009979115.1;locus_tag=A3216_09530;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 11567 11914 . + . ID=gene-A3216_09535;Name=A3216_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09535 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 11567 11914 . + 0 ID=cds-OAX70832.1;Parent=gene-A3216_09535;Dbxref=NCBI_GP:OAX70832.1;Name=OAX70832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09535;product=hypothetical protein;protein_id=OAX70832.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank pseudogene 14065 15210 . + . ID=gene-A3216_09540;Name=A3216_09540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09540;pseudo=true GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 14065 15210 . + 0 ID=cds-A3216_09540;Parent=gene-A3216_09540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625400.1;locus_tag=A3216_09540;product=mycofactocin radical SAM maturase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank pseudogene 15262 16363 . + . ID=gene-A3216_09545;Name=A3216_09545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09545;pseudo=true GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 15262 16363 . + 0 ID=cds-A3216_09545;Parent=gene-A3216_09545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005112048.1;locus_tag=A3216_09545;product=alpha-hydroxy-acid oxidizing enzyme;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 16404 16640 . - . ID=gene-A3216_09550;Name=A3216_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09550 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 16404 16640 . - 0 ID=cds-OAX70833.1;Parent=gene-A3216_09550;Dbxref=NCBI_GP:OAX70833.1;Name=OAX70833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09550;product=hypothetical protein;protein_id=OAX70833.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 17955 18257 . + . ID=gene-A3216_09555;Name=A3216_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09555 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 17955 18257 . + 0 ID=cds-OAX70834.1;Parent=gene-A3216_09555;Dbxref=NCBI_GP:OAX70834.1;Name=OAX70834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09555;product=hypothetical protein;protein_id=OAX70834.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 18282 18944 . + . ID=gene-A3216_09560;Name=A3216_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09560 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 18282 18944 . + 0 ID=cds-OAX70835.1;Parent=gene-A3216_09560;Dbxref=NCBI_GP:OAX70835.1;Name=OAX70835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09560;product=hypothetical protein;protein_id=OAX70835.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 19775 19987 . + . ID=gene-A3216_09565;Name=A3216_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09565 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 19775 19987 . + 0 ID=cds-OAX70836.1;Parent=gene-A3216_09565;Dbxref=NCBI_GP:OAX70836.1;Name=OAX70836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09565;product=hypothetical protein;protein_id=OAX70836.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 20766 20963 . - . ID=gene-A3216_09570;Name=A3216_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09570 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 20766 20963 . - 0 ID=cds-OAX70837.1;Parent=gene-A3216_09570;Dbxref=NCBI_GP:OAX70837.1;Name=OAX70837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09570;product=hypothetical protein;protein_id=OAX70837.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 21185 21490 . + . ID=gene-A3216_09575;Name=A3216_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09575 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 21185 21490 . + 0 ID=cds-OAX70838.1;Parent=gene-A3216_09575;Dbxref=NCBI_GP:OAX70838.1;Name=OAX70838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A4FPM6.1;locus_tag=A3216_09575;product=30S ribosomal protein S10;protein_id=OAX70838.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 21506 22159 . + . ID=gene-A3216_09580;Name=A3216_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09580 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 21506 22159 . + 0 ID=cds-OAX70839.1;Parent=gene-A3216_09580;Dbxref=NCBI_GP:OAX70839.1;Name=OAX70839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019514044.1;locus_tag=A3216_09580;product=50S ribosomal protein L3;protein_id=OAX70839.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 22159 22851 . + . ID=gene-A3216_09585;Name=A3216_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09585 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 22159 22851 . + 0 ID=cds-OAX70840.1;Parent=gene-A3216_09585;Dbxref=NCBI_GP:OAX70840.1;Name=OAX70840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32982.1;locus_tag=A3216_09585;product=50S ribosomal protein L4;protein_id=OAX70840.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 22851 23153 . + . ID=gene-A3216_09590;Name=A3216_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09590 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 22851 23153 . + 0 ID=cds-OAX70841.1;Parent=gene-A3216_09590;Dbxref=NCBI_GP:OAX70841.1;Name=OAX70841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003886862.1;locus_tag=A3216_09590;product=50S ribosomal protein L23;protein_id=OAX70841.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 23183 24025 . + . ID=gene-A3216_09595;Name=A3216_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09595 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 23183 24025 . + 0 ID=cds-OAX70842.1;Parent=gene-A3216_09595;Dbxref=NCBI_GP:OAX70842.1;Name=OAX70842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73SB1.1;locus_tag=A3216_09595;product=50S ribosomal protein L2;protein_id=OAX70842.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 24049 24330 . + . ID=gene-A3216_09600;Name=A3216_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09600 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 24049 24330 . + 0 ID=cds-OAX70843.1;Parent=gene-A3216_09600;Dbxref=NCBI_GP:OAX70843.1;Name=OAX70843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908582.1;locus_tag=A3216_09600;product=30S ribosomal protein S19;protein_id=OAX70843.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 24327 24854 . + . ID=gene-A3216_09605;Name=A3216_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09605 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 24327 24854 . + 0 ID=cds-OAX70844.1;Parent=gene-A3216_09605;Dbxref=NCBI_GP:OAX70844.1;Name=OAX70844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32986.1;locus_tag=A3216_09605;product=50S ribosomal protein L22;protein_id=OAX70844.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 24854 25699 . + . ID=gene-A3216_09610;Name=A3216_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09610 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 24854 25699 . + 0 ID=cds-OAX70845.1;Parent=gene-A3216_09610;Dbxref=NCBI_GP:OAX70845.1;Name=OAX70845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908580.1;locus_tag=A3216_09610;product=30S ribosomal protein S3;protein_id=OAX70845.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 25703 26119 . + . ID=gene-A3216_09615;Name=A3216_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09615 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 25703 26119 . + 0 ID=cds-OAX70846.1;Parent=gene-A3216_09615;Dbxref=NCBI_GP:OAX70846.1;Name=OAX70846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020101406.1;locus_tag=A3216_09615;product=50S ribosomal protein L16;protein_id=OAX70846.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 26119 26361 . + . ID=gene-A3216_09620;Name=A3216_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09620 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 26119 26361 . + 0 ID=cds-OAX70847.1;Parent=gene-A3216_09620;Dbxref=NCBI_GP:OAX70847.1;Name=OAX70847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0QSD9.1;locus_tag=A3216_09620;product=50S ribosomal protein L29;protein_id=OAX70847.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 26358 26741 . + . ID=gene-A3216_09625;Name=A3216_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09625 GCA_001648835.1|LVXE01000034.1 Protein Homology CDS 26358 26741 . + 0 ID=cds-OAX70848.1;Parent=gene-A3216_09625;Dbxref=NCBI_GP:OAX70848.1;Name=OAX70848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908577.1;locus_tag=A3216_09625;product=30S ribosomal protein S17;protein_id=OAX70848.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 28034 28279 . + . ID=gene-A3216_09630;Name=A3216_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09630 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 28034 28279 . + 0 ID=cds-OAX70849.1;Parent=gene-A3216_09630;Dbxref=NCBI_GP:OAX70849.1;Name=OAX70849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09630;product=hypothetical protein;protein_id=OAX70849.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 28295 28492 . + . ID=gene-A3216_09635;Name=A3216_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09635 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 28295 28492 . + 0 ID=cds-OAX70850.1;Parent=gene-A3216_09635;Dbxref=NCBI_GP:OAX70850.1;Name=OAX70850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09635;product=hypothetical protein;protein_id=OAX70850.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 29124 29345 . + . ID=gene-A3216_09640;Name=A3216_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09640 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 29124 29345 . + 0 ID=cds-OAX70851.1;Parent=gene-A3216_09640;Dbxref=NCBI_GP:OAX70851.1;Name=OAX70851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09640;product=hypothetical protein;protein_id=OAX70851.1;transl_table=11 GCA_001648835.1|LVXE01000034.1 Genbank gene 30880 31251 . - . ID=gene-A3216_09645;Name=A3216_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09645 GCA_001648835.1|LVXE01000034.1 GeneMarkS+ CDS 30880 31251 . - 0 ID=cds-OAX70852.1;Parent=gene-A3216_09645;Dbxref=NCBI_GP:OAX70852.1;Name=OAX70852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09645;product=hypothetical protein;protein_id=OAX70852.1;transl_table=11 ##sequence-region LVXE01000035.1 1 30748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000035.1 Genbank region 1 30748 . + . ID=LVXE01000035.1:1..30748;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000035.1 Genbank gene 138 359 . - . ID=gene-A3216_09650;Name=A3216_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09650 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 138 359 . - 0 ID=cds-OAX70799.1;Parent=gene-A3216_09650;Dbxref=NCBI_GP:OAX70799.1;Name=OAX70799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09650;product=hypothetical protein;protein_id=OAX70799.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 855 1610 . - . ID=gene-A3216_09655;Name=A3216_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09655 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 855 1610 . - 0 ID=cds-OAX70800.1;Parent=gene-A3216_09655;Dbxref=NCBI_GP:OAX70800.1;Name=OAX70800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019736436.1;locus_tag=A3216_09655;product=transcriptional regulator;protein_id=OAX70800.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 1831 2427 . - . ID=gene-A3216_09660;Name=A3216_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09660 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 1831 2427 . - 0 ID=cds-OAX70824.1;Parent=gene-A3216_09660;Dbxref=NCBI_GP:OAX70824.1;Name=OAX70824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCT5.2;locus_tag=A3216_09660;product=glutamine amidotransferase subunit PdxT;protein_id=OAX70824.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 3161 3433 . - . ID=gene-A3216_09665;Name=A3216_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09665 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 3161 3433 . - 0 ID=cds-OAX70801.1;Parent=gene-A3216_09665;Dbxref=NCBI_GP:OAX70801.1;Name=OAX70801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907742.1;locus_tag=A3216_09665;product=hypothetical protein;protein_id=OAX70801.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 3697 3939 . - . ID=gene-A3216_09670;Name=A3216_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09670 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 3697 3939 . - 0 ID=cds-OAX70802.1;Parent=gene-A3216_09670;Dbxref=NCBI_GP:OAX70802.1;Name=OAX70802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907741.1;locus_tag=A3216_09670;product=hypothetical protein;protein_id=OAX70802.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 4017 4247 . - . ID=gene-A3216_09675;Name=A3216_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09675 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 4017 4247 . - 0 ID=cds-OAX70803.1;Parent=gene-A3216_09675;Dbxref=NCBI_GP:OAX70803.1;Name=OAX70803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09675;product=hypothetical protein;protein_id=OAX70803.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 4300 4743 . - . ID=gene-A3216_09680;Name=A3216_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09680 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 4300 4743 . - 0 ID=cds-OAX70804.1;Parent=gene-A3216_09680;Dbxref=NCBI_GP:OAX70804.1;Name=OAX70804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09680;product=hypothetical protein;protein_id=OAX70804.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 6078 6368 . + . ID=gene-A3216_09685;Name=A3216_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09685 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 6078 6368 . + 0 ID=cds-OAX70805.1;Parent=gene-A3216_09685;Dbxref=NCBI_GP:OAX70805.1;Name=OAX70805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907740.1;locus_tag=A3216_09685;product=hypothetical protein;protein_id=OAX70805.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 8257 8454 . - . ID=gene-A3216_09690;Name=A3216_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09690 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 8257 8454 . - 0 ID=cds-OAX70806.1;Parent=gene-A3216_09690;Dbxref=NCBI_GP:OAX70806.1;Name=OAX70806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09690;product=hypothetical protein;protein_id=OAX70806.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank pseudogene 8530 10063 . - . ID=gene-A3216_09695;Name=A3216_09695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09695;pseudo=true GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 8530 10063 . - 0 ID=cds-A3216_09695;Parent=gene-A3216_09695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878573.1;locus_tag=A3216_09695;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 10354 10629 . - . ID=gene-A3216_09700;Name=A3216_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09700 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 10354 10629 . - 0 ID=cds-OAX70807.1;Parent=gene-A3216_09700;Dbxref=NCBI_GP:OAX70807.1;Name=OAX70807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09700;product=hypothetical protein;protein_id=OAX70807.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 11132 11914 . + . ID=gene-A3216_09705;Name=A3216_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09705 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 11132 11914 . + 0 ID=cds-OAX70808.1;Parent=gene-A3216_09705;Dbxref=NCBI_GP:OAX70808.1;Name=OAX70808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907739.1;locus_tag=A3216_09705;product=hypothetical protein;protein_id=OAX70808.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 12063 12302 . - . ID=gene-A3216_09710;Name=A3216_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09710 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 12063 12302 . - 0 ID=cds-OAX70809.1;Parent=gene-A3216_09710;Dbxref=NCBI_GP:OAX70809.1;Name=OAX70809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09710;product=hypothetical protein;protein_id=OAX70809.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 12744 13388 . - . ID=gene-A3216_09715;Name=A3216_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09715 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 12744 13388 . - 0 ID=cds-OAX70810.1;Parent=gene-A3216_09715;Dbxref=NCBI_GP:OAX70810.1;Name=OAX70810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49642.2;locus_tag=A3216_09715;product=hypothetical protein;protein_id=OAX70810.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 13434 14339 . - . ID=gene-A3216_09720;Name=A3216_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09720 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 13434 14339 . - 0 ID=cds-OAX70811.1;Parent=gene-A3216_09720;Dbxref=NCBI_GP:OAX70811.1;Name=OAX70811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907737.1;locus_tag=A3216_09720;product=lysophospholipase;protein_id=OAX70811.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 14947 15255 . + . ID=gene-A3216_09725;Name=A3216_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09725 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 14947 15255 . + 0 ID=cds-OAX70812.1;Parent=gene-A3216_09725;Dbxref=NCBI_GP:OAX70812.1;Name=OAX70812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09725;product=hypothetical protein;protein_id=OAX70812.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 15876 16163 . - . ID=gene-A3216_09730;Name=A3216_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09730 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 15876 16163 . - 0 ID=cds-OAX70825.1;Parent=gene-A3216_09730;Dbxref=NCBI_GP:OAX70825.1;Name=OAX70825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907736.1;locus_tag=A3216_09730;product=hypothetical protein;protein_id=OAX70825.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 18125 18364 . + . ID=gene-A3216_09735;Name=A3216_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09735 GCA_001648835.1|LVXE01000035.1 GeneMarkS+ CDS 18125 18364 . + 0 ID=cds-OAX70813.1;Parent=gene-A3216_09735;Dbxref=NCBI_GP:OAX70813.1;Name=OAX70813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09735;product=hypothetical protein;protein_id=OAX70813.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 18703 19608 . + . ID=gene-A3216_09740;Name=A3216_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09740 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 18703 19608 . + 0 ID=cds-OAX70814.1;Parent=gene-A3216_09740;Dbxref=NCBI_GP:OAX70814.1;Name=OAX70814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907735.1;locus_tag=A3216_09740;product=oxidoreductase;protein_id=OAX70814.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 20291 22316 . + . ID=gene-A3216_09745;Name=A3216_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09745;partial=true;start_range=.,20291 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 20291 22316 . + 1 ID=cds-OAX70815.1;Parent=gene-A3216_09745;Dbxref=NCBI_GP:OAX70815.1;Name=OAX70815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73WE4.1;locus_tag=A3216_09745;partial=true;product=threonine--tRNA ligase;protein_id=OAX70815.1;start_range=.,20291;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 22309 22929 . + . ID=gene-A3216_09750;Name=A3216_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09750 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 22309 22929 . + 0 ID=cds-OAX70816.1;Parent=gene-A3216_09750;Dbxref=NCBI_GP:OAX70816.1;Name=OAX70816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907733.1;locus_tag=A3216_09750;product=diadenosine tetraphosphate hydrolase;protein_id=OAX70816.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 22926 23645 . + . ID=gene-A3216_09755;Name=A3216_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09755 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 22926 23645 . + 0 ID=cds-OAX70817.1;Parent=gene-A3216_09755;Dbxref=NCBI_GP:OAX70817.1;Name=OAX70817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907732.1;locus_tag=A3216_09755;product=CDP-diacylglycerol--inositol 3-phosphatidyltransferase;protein_id=OAX70817.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 23642 24604 . + . ID=gene-A3216_09760;Name=A3216_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09760 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 23642 24604 . + 0 ID=cds-OAX70818.1;Parent=gene-A3216_09760;Dbxref=NCBI_GP:OAX70818.1;Name=OAX70818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907731.1;locus_tag=A3216_09760;product=phosphatidylinositol mannoside acyltransferase;protein_id=OAX70818.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 24614 25738 . + . ID=gene-A3216_09765;Name=A3216_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09765 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 24614 25738 . + 0 ID=cds-OAX70819.1;Parent=gene-A3216_09765;Dbxref=NCBI_GP:OAX70819.1;Name=OAX70819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007774557.1;locus_tag=A3216_09765;product=alpha-(1-2)-phosphatidylinositol mannosyltransferase;protein_id=OAX70819.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 25738 26787 . + . ID=gene-A3216_09770;Name=A3216_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09770 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 25738 26787 . + 0 ID=cds-OAX70820.1;Parent=gene-A3216_09770;Dbxref=NCBI_GP:OAX70820.1;Name=OAX70820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907729.1;locus_tag=A3216_09770;product=exopolyphosphatase;protein_id=OAX70820.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 26862 27785 . + . ID=gene-A3216_09775;Name=A3216_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09775 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 26862 27785 . + 0 ID=cds-OAX70821.1;Parent=gene-A3216_09775;Dbxref=NCBI_GP:OAX70821.1;Name=OAX70821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003919974.1;locus_tag=A3216_09775;product=pyridoxal biosynthesis lyase PdxS;protein_id=OAX70821.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 29714 29986 . - . ID=gene-A3216_09780;Name=A3216_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09780 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 29714 29986 . - 0 ID=cds-OAX70822.1;Parent=gene-A3216_09780;Dbxref=NCBI_GP:OAX70822.1;Name=OAX70822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907727.1;locus_tag=A3216_09780;product=hypothetical protein;protein_id=OAX70822.1;transl_table=11 GCA_001648835.1|LVXE01000035.1 Genbank gene 30190 30666 . - . ID=gene-A3216_09785;Name=A3216_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09785 GCA_001648835.1|LVXE01000035.1 Protein Homology CDS 30190 30666 . - 0 ID=cds-OAX70823.1;Parent=gene-A3216_09785;Dbxref=NCBI_GP:OAX70823.1;Name=OAX70823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907726.1;locus_tag=A3216_09785;product=hypothetical protein;protein_id=OAX70823.1;transl_table=11 ##sequence-region LVXE01000036.1 1 30655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000036.1 Genbank region 1 30655 . + . ID=LVXE01000036.1:1..30655;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000036.1 Genbank gene 59 1168 . - . ID=gene-A3216_09790;Name=A3216_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09790 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 59 1168 . - 0 ID=cds-OAX70778.1;Parent=gene-A3216_09790;Dbxref=NCBI_GP:OAX70778.1;Name=OAX70778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57240.1;locus_tag=A3216_09790;product=inositol 1-phosphate synthase;protein_id=OAX70778.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 1284 3092 . - . ID=gene-A3216_09795;Name=A3216_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09795 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 1284 3092 . - 0 ID=cds-OAX70779.1;Parent=gene-A3216_09795;Dbxref=NCBI_GP:OAX70779.1;Name=OAX70779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907709.1;locus_tag=A3216_09795;product=transporter;protein_id=OAX70779.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 3149 3328 . + . ID=gene-A3216_09800;Name=A3216_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09800 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 3149 3328 . + 0 ID=cds-OAX70780.1;Parent=gene-A3216_09800;Dbxref=NCBI_GP:OAX70780.1;Name=OAX70780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09800;product=hypothetical protein;protein_id=OAX70780.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 3405 4442 . - . ID=gene-A3216_09805;Name=A3216_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09805 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 3405 4442 . - 0 ID=cds-OAX70781.1;Parent=gene-A3216_09805;Dbxref=NCBI_GP:OAX70781.1;Name=OAX70781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907710.1;locus_tag=A3216_09805;product=sugar ABC transporter substrate-binding protein;protein_id=OAX70781.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 5582 5953 . + . ID=gene-A3216_09810;Name=A3216_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09810 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 5582 5953 . + 0 ID=cds-OAX70782.1;Parent=gene-A3216_09810;Dbxref=NCBI_GP:OAX70782.1;Name=OAX70782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09810;product=hypothetical protein;protein_id=OAX70782.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 6026 6274 . + . ID=gene-A3216_09815;Name=A3216_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09815 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 6026 6274 . + 0 ID=cds-OAX70783.1;Parent=gene-A3216_09815;Dbxref=NCBI_GP:OAX70783.1;Name=OAX70783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09815;product=hypothetical protein;protein_id=OAX70783.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 7229 7980 . - . ID=gene-A3216_09820;Name=A3216_09820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09820;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 7229 7980 . - 0 ID=cds-A3216_09820;Parent=gene-A3216_09820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012394165.1;locus_tag=A3216_09820;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 8155 9095 . - . ID=gene-A3216_09825;Name=A3216_09825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09825;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 8155 9095 . - 0 ID=cds-A3216_09825;Parent=gene-A3216_09825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011895728.1;locus_tag=A3216_09825;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 10562 11746 . + . ID=gene-A3216_09830;Name=A3216_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09830 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 10562 11746 . + 0 ID=cds-OAX70784.1;Parent=gene-A3216_09830;Dbxref=NCBI_GP:OAX70784.1;Name=OAX70784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907711.1;locus_tag=A3216_09830;product=secretion protein EspA;protein_id=OAX70784.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 11804 12124 . + . ID=gene-A3216_09835;Name=A3216_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09835 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 11804 12124 . + 0 ID=cds-OAX70785.1;Parent=gene-A3216_09835;Dbxref=NCBI_GP:OAX70785.1;Name=OAX70785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49723.1;locus_tag=A3216_09835;product=secretion protein EspC;protein_id=OAX70785.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 12138 12788 . + . ID=gene-A3216_09840;Name=A3216_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09840 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 12138 12788 . + 0 ID=cds-OAX70786.1;Parent=gene-A3216_09840;Dbxref=NCBI_GP:OAX70786.1;Name=OAX70786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907713.1;locus_tag=A3216_09840;product=secretion protein EspD;protein_id=OAX70786.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 14111 15064 . - . ID=gene-A3216_09845;Name=A3216_09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09845;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 14111 15064 . - 0 ID=cds-A3216_09845;Parent=gene-A3216_09845;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006898370.1;locus_tag=A3216_09845;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 15672 15974 . + . ID=gene-A3216_09850;Name=A3216_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09850 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 15672 15974 . + 0 ID=cds-OAX70787.1;Parent=gene-A3216_09850;Dbxref=NCBI_GP:OAX70787.1;Name=OAX70787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634415.1;locus_tag=A3216_09850;product=PbsX family transcriptional regulator;protein_id=OAX70787.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 16100 17326 . + . ID=gene-A3216_09855;Name=A3216_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09855 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 16100 17326 . + 0 ID=cds-OAX70788.1;Parent=gene-A3216_09855;Dbxref=NCBI_GP:OAX70788.1;Name=OAX70788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907715.1;locus_tag=A3216_09855;product=hypothetical protein;protein_id=OAX70788.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 17711 18349 . - . ID=gene-A3216_09860;Name=A3216_09860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09860;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 17711 18349 . - 0 ID=cds-A3216_09860;Parent=gene-A3216_09860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393037.1;locus_tag=A3216_09860;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 19329 20618 . - . ID=gene-A3216_09865;Name=A3216_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09865 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 19329 20618 . - 0 ID=cds-OAX70789.1;Parent=gene-A3216_09865;Dbxref=NCBI_GP:OAX70789.1;Name=OAX70789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49734.1;locus_tag=A3216_09865;product=trehalose-phosphatase;protein_id=OAX70789.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 20672 22037 . - . ID=gene-A3216_09870;Name=A3216_09870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09870;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 20672 22037 . - 0 ID=cds-A3216_09870;Parent=gene-A3216_09870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015303852.1;locus_tag=A3216_09870;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 22500 22865 . + . ID=gene-A3216_09875;Name=A3216_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09875 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 22500 22865 . + 0 ID=cds-OAX70790.1;Parent=gene-A3216_09875;Dbxref=NCBI_GP:OAX70790.1;Name=OAX70790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09875;product=hypothetical protein;protein_id=OAX70790.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 24359 24754 . - . ID=gene-A3216_09880;Name=A3216_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09880 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 24359 24754 . - 0 ID=cds-OAX70791.1;Parent=gene-A3216_09880;Dbxref=NCBI_GP:OAX70791.1;Name=OAX70791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09880;product=hypothetical protein;protein_id=OAX70791.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 24977 25621 . + . ID=gene-A3216_09885;Name=A3216_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09885 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 24977 25621 . + 0 ID=cds-OAX70792.1;Parent=gene-A3216_09885;Dbxref=NCBI_GP:OAX70792.1;Name=OAX70792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020727345.1;locus_tag=A3216_09885;product=nitroreductase;protein_id=OAX70792.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 25759 26223 . - . ID=gene-A3216_09890;Name=A3216_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09890 GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 25759 26223 . - 0 ID=cds-OAX70798.1;Parent=gene-A3216_09890;Dbxref=NCBI_GP:OAX70798.1;Name=OAX70798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003901617.1;locus_tag=A3216_09890;product=RNA methyltransferase;protein_id=OAX70798.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 26447 26653 . + . ID=gene-A3216_09895;Name=A3216_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09895 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 26447 26653 . + 0 ID=cds-OAX70793.1;Parent=gene-A3216_09895;Dbxref=NCBI_GP:OAX70793.1;Name=OAX70793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09895;product=hypothetical protein;protein_id=OAX70793.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 26675 27010 . + . ID=gene-A3216_09900;Name=A3216_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09900 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 26675 27010 . + 0 ID=cds-OAX70794.1;Parent=gene-A3216_09900;Dbxref=NCBI_GP:OAX70794.1;Name=OAX70794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09900;product=hypothetical protein;protein_id=OAX70794.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 27011 27367 . + . ID=gene-A3216_09905;Name=A3216_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09905 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 27011 27367 . + 0 ID=cds-OAX70795.1;Parent=gene-A3216_09905;Dbxref=NCBI_GP:OAX70795.1;Name=OAX70795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09905;product=hypothetical protein;protein_id=OAX70795.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 27836 28054 . + . ID=gene-A3216_09910;Name=A3216_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09910 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 27836 28054 . + 0 ID=cds-OAX70796.1;Parent=gene-A3216_09910;Dbxref=NCBI_GP:OAX70796.1;Name=OAX70796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09910;product=hypothetical protein;protein_id=OAX70796.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank gene 28175 28360 . + . ID=gene-A3216_09915;Name=A3216_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09915 GCA_001648835.1|LVXE01000036.1 GeneMarkS+ CDS 28175 28360 . + 0 ID=cds-OAX70797.1;Parent=gene-A3216_09915;Dbxref=NCBI_GP:OAX70797.1;Name=OAX70797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09915;product=hypothetical protein;protein_id=OAX70797.1;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 29079 29420 . + . ID=gene-A3216_09920;Name=A3216_09920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09920;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 29079 29420 . + 0 ID=cds-A3216_09920;Parent=gene-A3216_09920;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011799344.1;locus_tag=A3216_09920;product=dynein regulation protein LC7;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000036.1 Genbank pseudogene 29592 30185 . + . ID=gene-A3216_09925;Name=A3216_09925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09925;pseudo=true GCA_001648835.1|LVXE01000036.1 Protein Homology CDS 29592 30185 . + 0 ID=cds-A3216_09925;Parent=gene-A3216_09925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014208991.1;locus_tag=A3216_09925;product=ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000037.1 1 30181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000037.1 Genbank region 1 30181 . + . ID=LVXE01000037.1:1..30181;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000037.1 Genbank gene 33 341 . - . ID=gene-A3216_09930;Name=A3216_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09930 GCA_001648835.1|LVXE01000037.1 GeneMarkS+ CDS 33 341 . - 0 ID=cds-OAX70760.1;Parent=gene-A3216_09930;Dbxref=NCBI_GP:OAX70760.1;Name=OAX70760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09930;product=hypothetical protein;protein_id=OAX70760.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 759 974 . - . ID=gene-A3216_09935;Name=A3216_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09935 GCA_001648835.1|LVXE01000037.1 GeneMarkS+ CDS 759 974 . - 0 ID=cds-OAX70761.1;Parent=gene-A3216_09935;Dbxref=NCBI_GP:OAX70761.1;Name=OAX70761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_09935;product=hypothetical protein;protein_id=OAX70761.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 1119 2222 . - . ID=gene-A3216_09940;Name=A3216_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09940 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 1119 2222 . - 0 ID=cds-OAX70762.1;Parent=gene-A3216_09940;Dbxref=NCBI_GP:OAX70762.1;Name=OAX70762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908367.1;locus_tag=A3216_09940;product=succinyldiaminopimelate transaminase;protein_id=OAX70762.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 2260 2586 . - . ID=gene-A3216_09945;Name=A3216_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09945 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 2260 2586 . - 0 ID=cds-OAX70763.1;Parent=gene-A3216_09945;Dbxref=NCBI_GP:OAX70763.1;Name=OAX70763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908368.1;locus_tag=A3216_09945;product=ferredoxin;protein_id=OAX70763.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 3136 5128 . + . ID=gene-A3216_09950;Name=A3216_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09950;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 3136 5128 . + 0 ID=cds-A3216_09950;Parent=gene-A3216_09950;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003896520.1;locus_tag=A3216_09950;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 5773 8364 . - . ID=gene-A3216_09955;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;locus_tag=A3216_09955 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 5773 8364 . - 0 ID=cds-OAX70764.1;Parent=gene-A3216_09955;Dbxref=NCBI_GP:OAX70764.1;Name=OAX70764.1;Note=7%2C8-didemethyl-8-hydroxy-5-deazariboflavin synthase%3B catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2%2C4(1H%2C3H)-pyrimidinedione to form 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin (FO)%3B functions in F420 biosynthesis;gbkey=CDS;gene=fbiC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBX6.1;locus_tag=A3216_09955;product=7%2C8-didemethyl-8-hydroxy-5-deazariboflavin synthase;protein_id=OAX70764.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 8646 9534 . + . ID=gene-A3216_09960;Name=A3216_09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09960;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 8646 9534 . + 0 ID=cds-A3216_09960;Parent=gene-A3216_09960;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014390071.1;locus_tag=A3216_09960;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 9531 9884 . - . ID=gene-A3216_09965;Name=A3216_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09965 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 9531 9884 . - 0 ID=cds-OAX70765.1;Parent=gene-A3216_09965;Dbxref=NCBI_GP:OAX70765.1;Name=OAX70765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626317.1;locus_tag=A3216_09965;product=hypothetical protein;protein_id=OAX70765.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 10049 10975 . - . ID=gene-A3216_09970;Name=A3216_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09970 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 10049 10975 . - 0 ID=cds-OAX70766.1;Parent=gene-A3216_09970;Dbxref=NCBI_GP:OAX70766.1;Name=OAX70766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBX4.1;locus_tag=A3216_09970;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=OAX70766.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 11125 11759 . + . ID=gene-A3216_09975;Name=A3216_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09975;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 11125 11759 . + 0 ID=cds-A3216_09975;Parent=gene-A3216_09975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975502.1;locus_tag=A3216_09975;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 11782 13635 . - . ID=gene-A3216_09980;Name=A3216_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09980 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 11782 13635 . - 0 ID=cds-OAX70774.1;Parent=gene-A3216_09980;Dbxref=NCBI_GP:OAX70774.1;Name=OAX70774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908372.1;locus_tag=A3216_09980;product=monoacyl phosphatidylinositol tetramannoside-binding protein;protein_id=OAX70774.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 13702 15588 . - . ID=gene-A3216_09985;Name=A3216_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_09985 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 13702 15588 . - 0 ID=cds-OAX70767.1;Parent=gene-A3216_09985;Dbxref=NCBI_GP:OAX70767.1;Name=OAX70767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975500.1;locus_tag=A3216_09985;product=GTP-binding protein TypA;protein_id=OAX70767.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 15710 16384 . - . ID=gene-A3216_09990;Name=A3216_09990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09990;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 15710 16384 . - 0 ID=cds-A3216_09990;Parent=gene-A3216_09990;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003913274.1;locus_tag=A3216_09990;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 16434 17047 . - . ID=gene-A3216_09995;Name=A3216_09995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_09995;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 16434 17047 . - 0 ID=cds-A3216_09995;Parent=gene-A3216_09995;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941435.1;locus_tag=A3216_09995;product=nitrate reductase molybdenum cofactor assembly chaperone;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 17089 18761 . - . ID=gene-A3216_10000;Name=narY;gbkey=Gene;gene=narY;gene_biotype=pseudogene;locus_tag=A3216_10000;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 17089 18761 . - 0 ID=cds-A3216_10000;Parent=gene-A3216_10000;Note=with NarZV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels%3B frameshifted%3B internal stop;gbkey=CDS;gene=narY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013116993.1;locus_tag=A3216_10000;product=nitrate reductase subunit beta;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 18761 22424 . - . ID=gene-A3216_10005;Name=A3216_10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10005;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 18761 22424 . - 0 ID=cds-A3216_10005;Parent=gene-A3216_10005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010950499.1;locus_tag=A3216_10005;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 23252 23536 . + . ID=gene-A3216_10010;Name=A3216_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10010 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 23252 23536 . + 0 ID=cds-OAX70768.1;Parent=gene-A3216_10010;Dbxref=NCBI_GP:OAX70768.1;Name=OAX70768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBX1.1;locus_tag=A3216_10010;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=OAX70768.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 23523 24800 . - . ID=gene-A3216_10015;Name=pimE;gbkey=Gene;gene=pimE;gene_biotype=protein_coding;locus_tag=A3216_10015 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 23523 24800 . - 0 ID=cds-OAX70775.1;Parent=gene-A3216_10015;Dbxref=NCBI_GP:OAX70775.1;Name=OAX70775.1;Note=involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis;gbkey=CDS;gene=pimE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878499.1;locus_tag=A3216_10015;product=mannosyltransferase;protein_id=OAX70775.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 24919 25467 . + . ID=gene-A3216_10020;Name=A3216_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10020 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 24919 25467 . + 0 ID=cds-OAX70769.1;Parent=gene-A3216_10020;Dbxref=NCBI_GP:OAX70769.1;Name=OAX70769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254489.1;locus_tag=A3216_10020;product=hypothetical protein;protein_id=OAX70769.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 25495 26541 . + . ID=gene-A3216_10025;Name=A3216_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10025 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 25495 26541 . + 0 ID=cds-OAX70770.1;Parent=gene-A3216_10025;Dbxref=NCBI_GP:OAX70770.1;Name=OAX70770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908377.1;locus_tag=A3216_10025;product=hypothetical protein;protein_id=OAX70770.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank pseudogene 26716 27290 . - . ID=gene-A3216_10030;Name=A3216_10030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10030;pseudo=true GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 26716 27290 . - 0 ID=cds-A3216_10030;Parent=gene-A3216_10030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003920454.1;locus_tag=A3216_10030;product=Fe-S cluster assembly protein HesB;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 27718 28161 . - . ID=gene-A3216_10035;Name=A3216_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10035 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 27718 28161 . - 0 ID=cds-OAX70776.1;Parent=gene-A3216_10035;Dbxref=NCBI_GP:OAX70776.1;Name=OAX70776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875444.1;locus_tag=A3216_10035;product=PPOX class F420-dependent enzyme;protein_id=OAX70776.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 28243 28458 . + . ID=gene-A3216_10040;Name=A3216_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10040 GCA_001648835.1|LVXE01000037.1 GeneMarkS+ CDS 28243 28458 . + 0 ID=cds-OAX70771.1;Parent=gene-A3216_10040;Dbxref=NCBI_GP:OAX70771.1;Name=OAX70771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10040;product=hypothetical protein;protein_id=OAX70771.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 28608 28859 . + . ID=gene-A3216_10045;Name=A3216_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10045 GCA_001648835.1|LVXE01000037.1 GeneMarkS+ CDS 28608 28859 . + 0 ID=cds-OAX70772.1;Parent=gene-A3216_10045;Dbxref=NCBI_GP:OAX70772.1;Name=OAX70772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10045;product=hypothetical protein;protein_id=OAX70772.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 29006 29206 . - . ID=gene-A3216_10050;Name=A3216_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10050 GCA_001648835.1|LVXE01000037.1 GeneMarkS+ CDS 29006 29206 . - 0 ID=cds-OAX70773.1;Parent=gene-A3216_10050;Dbxref=NCBI_GP:OAX70773.1;Name=OAX70773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10050;product=hypothetical protein;protein_id=OAX70773.1;transl_table=11 GCA_001648835.1|LVXE01000037.1 Genbank gene 29404 30117 . + . ID=gene-A3216_10055;Name=A3216_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10055 GCA_001648835.1|LVXE01000037.1 Protein Homology CDS 29404 30117 . + 0 ID=cds-OAX70777.1;Parent=gene-A3216_10055;Dbxref=NCBI_GP:OAX70777.1;Name=OAX70777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014000636.1;locus_tag=A3216_10055;product=NAD-dependent protein deacylase;protein_id=OAX70777.1;transl_table=11 ##sequence-region LVXE01000038.1 1 29452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000038.1 Genbank region 1 29452 . + . ID=LVXE01000038.1:1..29452;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000038.1 Genbank gene 930 1151 . + . ID=gene-A3216_10060;Name=A3216_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10060 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 930 1151 . + 0 ID=cds-OAX70743.1;Parent=gene-A3216_10060;Dbxref=NCBI_GP:OAX70743.1;Name=OAX70743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10060;product=hypothetical protein;protein_id=OAX70743.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank pseudogene 1328 2480 . + . ID=gene-A3216_10065;Name=A3216_10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10065;pseudo=true GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 1328 2480 . + 0 ID=cds-A3216_10065;Parent=gene-A3216_10065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003916429.1;locus_tag=A3216_10065;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 2733 9089 . + . ID=gene-A3216_10070;Name=A3216_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10070 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 2733 9089 . + 0 ID=cds-OAX70744.1;Parent=gene-A3216_10070;Dbxref=NCBI_GP:OAX70744.1;Name=OAX70744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908211.1;locus_tag=A3216_10070;product=polyketide synthase;protein_id=OAX70744.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 9170 10585 . + . ID=gene-A3216_10075;Name=A3216_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10075 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 9170 10585 . + 0 ID=cds-OAX70745.1;Parent=gene-A3216_10075;Dbxref=NCBI_GP:OAX70745.1;Name=OAX70745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908212.1;locus_tag=A3216_10075;product=acyltransferase;protein_id=OAX70745.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 10667 13618 . + . ID=gene-A3216_10080;Name=A3216_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10080 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 10667 13618 . + 0 ID=cds-OAX70759.1;Parent=gene-A3216_10080;Dbxref=NCBI_GP:OAX70759.1;Name=OAX70759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908213.1;locus_tag=A3216_10080;product=hypothetical protein;protein_id=OAX70759.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 14046 15122 . - . ID=gene-A3216_10085;Name=A3216_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10085 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 14046 15122 . - 0 ID=cds-OAX70746.1;Parent=gene-A3216_10085;Dbxref=NCBI_GP:OAX70746.1;Name=OAX70746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908214.1;locus_tag=A3216_10085;product=PE-PPE domain-containing protein;protein_id=OAX70746.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 15287 15979 . - . ID=gene-A3216_10090;Name=A3216_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10090 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 15287 15979 . - 0 ID=cds-OAX70747.1;Parent=gene-A3216_10090;Dbxref=NCBI_GP:OAX70747.1;Name=OAX70747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908215.1;locus_tag=A3216_10090;product=hypothetical protein;protein_id=OAX70747.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 16009 17748 . - . ID=gene-A3216_10095;Name=A3216_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10095 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 16009 17748 . - 0 ID=cds-OAX70748.1;Parent=gene-A3216_10095;Dbxref=NCBI_GP:OAX70748.1;Name=OAX70748.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54200.2;locus_tag=A3216_10095;product=acyl-CoA synthetase;protein_id=OAX70748.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 20134 20328 . + . ID=gene-A3216_10100;Name=A3216_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10100 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 20134 20328 . + 0 ID=cds-OAX70749.1;Parent=gene-A3216_10100;Dbxref=NCBI_GP:OAX70749.1;Name=OAX70749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10100;product=hypothetical protein;protein_id=OAX70749.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 20412 20708 . - . ID=gene-A3216_10105;Name=A3216_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10105 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 20412 20708 . - 0 ID=cds-OAX70750.1;Parent=gene-A3216_10105;Dbxref=NCBI_GP:OAX70750.1;Name=OAX70750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10105;product=hypothetical protein;protein_id=OAX70750.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 20817 21092 . + . ID=gene-A3216_10110;Name=A3216_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10110 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 20817 21092 . + 0 ID=cds-OAX70751.1;Parent=gene-A3216_10110;Dbxref=NCBI_GP:OAX70751.1;Name=OAX70751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10110;product=hypothetical protein;protein_id=OAX70751.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 22737 23063 . + . ID=gene-A3216_10115;Name=A3216_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10115 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 22737 23063 . + 0 ID=cds-OAX70752.1;Parent=gene-A3216_10115;Dbxref=NCBI_GP:OAX70752.1;Name=OAX70752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10115;product=hypothetical protein;protein_id=OAX70752.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 23915 24271 . - . ID=gene-A3216_10120;Name=A3216_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10120 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 23915 24271 . - 0 ID=cds-OAX70753.1;Parent=gene-A3216_10120;Dbxref=NCBI_GP:OAX70753.1;Name=OAX70753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10120;product=hypothetical protein;protein_id=OAX70753.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 24985 25869 . + . ID=gene-A3216_10125;Name=A3216_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10125 GCA_001648835.1|LVXE01000038.1 Protein Homology CDS 24985 25869 . + 0 ID=cds-OAX70754.1;Parent=gene-A3216_10125;Dbxref=NCBI_GP:OAX70754.1;Name=OAX70754.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53526.1;locus_tag=A3216_10125;product=enoyl-CoA hydratase;protein_id=OAX70754.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 26907 27098 . + . ID=gene-A3216_10130;Name=A3216_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10130 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 26907 27098 . + 0 ID=cds-OAX70755.1;Parent=gene-A3216_10130;Dbxref=NCBI_GP:OAX70755.1;Name=OAX70755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10130;product=hypothetical protein;protein_id=OAX70755.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 27287 27490 . + . ID=gene-A3216_10135;Name=A3216_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10135 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 27287 27490 . + 0 ID=cds-OAX70756.1;Parent=gene-A3216_10135;Dbxref=NCBI_GP:OAX70756.1;Name=OAX70756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10135;product=hypothetical protein;protein_id=OAX70756.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 27756 28013 . + . ID=gene-A3216_10140;Name=A3216_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10140 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 27756 28013 . + 0 ID=cds-OAX70757.1;Parent=gene-A3216_10140;Dbxref=NCBI_GP:OAX70757.1;Name=OAX70757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10140;product=hypothetical protein;protein_id=OAX70757.1;transl_table=11 GCA_001648835.1|LVXE01000038.1 Genbank gene 28644 29069 . + . ID=gene-A3216_10145;Name=A3216_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10145 GCA_001648835.1|LVXE01000038.1 GeneMarkS+ CDS 28644 29069 . + 0 ID=cds-OAX70758.1;Parent=gene-A3216_10145;Dbxref=NCBI_GP:OAX70758.1;Name=OAX70758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10145;product=hypothetical protein;protein_id=OAX70758.1;transl_table=11 ##sequence-region LVXE01000039.1 1 26150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000039.1 Genbank region 1 26150 . + . ID=LVXE01000039.1:1..26150;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000039.1 Genbank pseudogene 1 223 . - . ID=gene-A3216_10150;Name=A3216_10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10150;pseudo=true GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 1 223 . - 0 ID=cds-A3216_10150;Parent=gene-A3216_10150;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10150;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 418 1260 . - . ID=gene-A3216_10155;Name=A3216_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10155 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 418 1260 . - 0 ID=cds-OAX70719.1;Parent=gene-A3216_10155;Dbxref=NCBI_GP:OAX70719.1;Name=OAX70719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003932736.1;locus_tag=A3216_10155;product=hypothetical protein;protein_id=OAX70719.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 1291 2358 . - . ID=gene-A3216_10160;Name=A3216_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10160 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 1291 2358 . - 0 ID=cds-OAX70720.1;Parent=gene-A3216_10160;Dbxref=NCBI_GP:OAX70720.1;Name=OAX70720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54580.2;locus_tag=A3216_10160;product=hypothetical protein;protein_id=OAX70720.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 2355 3374 . - . ID=gene-A3216_10165;Name=A3216_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10165 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 2355 3374 . - 0 ID=cds-OAX70721.1;Parent=gene-A3216_10165;Dbxref=NCBI_GP:OAX70721.1;Name=OAX70721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54882.2;locus_tag=A3216_10165;product=hypothetical protein;protein_id=OAX70721.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 3478 4311 . + . ID=gene-A3216_10170;Name=A3216_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10170 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 3478 4311 . + 0 ID=cds-OAX70739.1;Parent=gene-A3216_10170;Dbxref=NCBI_GP:OAX70739.1;Name=OAX70739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54579.2;locus_tag=A3216_10170;product=hypothetical protein;protein_id=OAX70739.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank pseudogene 4400 5086 . - . ID=gene-A3216_10175;Name=A3216_10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10175;pseudo=true GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 4400 5086 . - 0 ID=cds-A3216_10175;Parent=gene-A3216_10175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P67740.1;locus_tag=A3216_10175;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 5306 5608 . + . ID=gene-A3216_10180;Name=A3216_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10180 GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 5306 5608 . + 0 ID=cds-OAX70722.1;Parent=gene-A3216_10180;Dbxref=NCBI_GP:OAX70722.1;Name=OAX70722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10180;product=hypothetical protein;protein_id=OAX70722.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 6330 6698 . - . ID=gene-A3216_10185;Name=A3216_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10185 GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 6330 6698 . - 0 ID=cds-OAX70723.1;Parent=gene-A3216_10185;Dbxref=NCBI_GP:OAX70723.1;Name=OAX70723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10185;product=hypothetical protein;protein_id=OAX70723.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 7242 7565 . + . ID=gene-A3216_10190;Name=A3216_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10190 GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 7242 7565 . + 0 ID=cds-OAX70724.1;Parent=gene-A3216_10190;Dbxref=NCBI_GP:OAX70724.1;Name=OAX70724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10190;product=hypothetical protein;protein_id=OAX70724.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 7772 8368 . - . ID=gene-A3216_10195;Name=A3216_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10195 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 7772 8368 . - 0 ID=cds-OAX70725.1;Parent=gene-A3216_10195;Dbxref=NCBI_GP:OAX70725.1;Name=OAX70725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54884.1;locus_tag=A3216_10195;product=DNA-binding response regulator;protein_id=OAX70725.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 8411 9736 . - . ID=gene-A3216_10200;Name=A3216_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10200 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 8411 9736 . - 0 ID=cds-OAX70740.1;Parent=gene-A3216_10200;Dbxref=NCBI_GP:OAX70740.1;Name=OAX70740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908900.1;locus_tag=A3216_10200;product=two-component sensor histidine kinase;protein_id=OAX70740.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 9899 10642 . - . ID=gene-A3216_10205;Name=A3216_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10205 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 9899 10642 . - 0 ID=cds-OAX70726.1;Parent=gene-A3216_10205;Dbxref=NCBI_GP:OAX70726.1;Name=OAX70726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53531.1;locus_tag=A3216_10205;product=phosphoglyceromutase;protein_id=OAX70726.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 10655 11209 . - . ID=gene-A3216_10210;Name=A3216_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10210 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 10655 11209 . - 0 ID=cds-OAX70727.1;Parent=gene-A3216_10210;Dbxref=NCBI_GP:OAX70727.1;Name=OAX70727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54139.1;locus_tag=A3216_10210;product=histidine kinase;protein_id=OAX70727.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 11283 12569 . - . ID=gene-A3216_10215;Name=A3216_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10215 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 11283 12569 . - 0 ID=cds-OAX70741.1;Parent=gene-A3216_10215;Dbxref=NCBI_GP:OAX70741.1;Name=OAX70741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54138.2;locus_tag=A3216_10215;product=D-inositol-3-phosphate glycosyltransferase;protein_id=OAX70741.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank pseudogene 13909 14682 . + . ID=gene-A3216_10220;Name=A3216_10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10220;pseudo=true GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 13909 14682 . + 0 ID=cds-A3216_10220;Parent=gene-A3216_10220;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013805424.1;locus_tag=A3216_10220;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 14666 15991 . - . ID=gene-A3216_10225;Name=A3216_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10225 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 14666 15991 . - 0 ID=cds-OAX70728.1;Parent=gene-A3216_10225;Dbxref=NCBI_GP:OAX70728.1;Name=OAX70728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908904.1;locus_tag=A3216_10225;product=L%2CD-transpeptidase;protein_id=OAX70728.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 16072 17175 . - . ID=gene-A3216_10230;Name=A3216_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10230 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 16072 17175 . - 0 ID=cds-OAX70729.1;Parent=gene-A3216_10230;Dbxref=NCBI_GP:OAX70729.1;Name=OAX70729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB48.1;locus_tag=A3216_10230;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=OAX70729.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 17476 17715 . + . ID=gene-A3216_10235;Name=A3216_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10235 GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 17476 17715 . + 0 ID=cds-OAX70730.1;Parent=gene-A3216_10235;Dbxref=NCBI_GP:OAX70730.1;Name=OAX70730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10235;product=hypothetical protein;protein_id=OAX70730.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 17924 18739 . + . ID=gene-A3216_10240;Name=A3216_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10240 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 17924 18739 . + 0 ID=cds-OAX70731.1;Parent=gene-A3216_10240;Dbxref=NCBI_GP:OAX70731.1;Name=OAX70731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908906.1;locus_tag=A3216_10240;product=hydrolase;protein_id=OAX70731.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 18763 19782 . + . ID=gene-A3216_10245;Name=A3216_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10245 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 18763 19782 . + 0 ID=cds-OAX70732.1;Parent=gene-A3216_10245;Dbxref=NCBI_GP:OAX70732.1;Name=OAX70732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010950188.1;locus_tag=A3216_10245;product=hypothetical protein;protein_id=OAX70732.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 19839 20519 . - . ID=gene-A3216_10250;Name=A3216_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10250 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 19839 20519 . - 0 ID=cds-OAX70733.1;Parent=gene-A3216_10250;Dbxref=NCBI_GP:OAX70733.1;Name=OAX70733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB45.1;locus_tag=A3216_10250;product=deoxyribose-phosphate aldolase;protein_id=OAX70733.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 20519 20890 . - . ID=gene-A3216_10255;Name=A3216_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10255 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 20519 20890 . - 0 ID=cds-OAX70734.1;Parent=gene-A3216_10255;Dbxref=NCBI_GP:OAX70734.1;Name=OAX70734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB44.1;locus_tag=A3216_10255;product=hypothetical protein;protein_id=OAX70734.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 20993 21280 . - . ID=gene-A3216_10260;Name=A3216_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10260 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 20993 21280 . - 0 ID=cds-OAX70735.1;Parent=gene-A3216_10260;Dbxref=NCBI_GP:OAX70735.1;Name=OAX70735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908910.1;locus_tag=A3216_10260;product=hypothetical protein;protein_id=OAX70735.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 21400 21966 . - . ID=gene-A3216_10265;Name=A3216_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10265 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 21400 21966 . - 0 ID=cds-OAX70742.1;Parent=gene-A3216_10265;Dbxref=NCBI_GP:OAX70742.1;Name=OAX70742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CB42.1;locus_tag=A3216_10265;product=heparin-binding hemagglutinin;protein_id=OAX70742.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank pseudogene 22270 22615 . - . ID=gene-A3216_10270;Name=A3216_10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10270;pseudo=true GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 22270 22615 . - 0 ID=cds-A3216_10270;Parent=gene-A3216_10270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008261249.1;locus_tag=A3216_10270;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 22802 23044 . + . ID=gene-A3216_10275;Name=A3216_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10275 GCA_001648835.1|LVXE01000039.1 GeneMarkS+ CDS 22802 23044 . + 0 ID=cds-OAX70736.1;Parent=gene-A3216_10275;Dbxref=NCBI_GP:OAX70736.1;Name=OAX70736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10275;product=hypothetical protein;protein_id=OAX70736.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 23461 24162 . + . ID=gene-A3216_10280;Name=A3216_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10280 GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 23461 24162 . + 0 ID=cds-OAX70737.1;Parent=gene-A3216_10280;Dbxref=NCBI_GP:OAX70737.1;Name=OAX70737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908912.1;locus_tag=A3216_10280;product=TetR family transcriptional regulator;protein_id=OAX70737.1;transl_table=11 GCA_001648835.1|LVXE01000039.1 Genbank gene 25345 26150 . + . ID=gene-A3216_10285;Name=A3216_10285;end_range=26150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10285;partial=true GCA_001648835.1|LVXE01000039.1 Protein Homology CDS 25345 26150 . + 0 ID=cds-OAX70738.1;Parent=gene-A3216_10285;Dbxref=NCBI_GP:OAX70738.1;Name=OAX70738.1;end_range=26150,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908913.1;locus_tag=A3216_10285;partial=true;product=SAM-dependent methyltransferase;protein_id=OAX70738.1;transl_table=11 ##sequence-region LVXE01000004.1 1 139620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000004.1 Genbank region 1 139620 . + . ID=LVXE01000004.1:1..139620;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000004.1 Genbank gene 73 2661 . - . ID=gene-A3216_02615;Name=A3216_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02615 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 73 2661 . - 0 ID=cds-OAX71870.1;Parent=gene-A3216_02615;Dbxref=NCBI_GP:OAX71870.1;Name=OAX71870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908366.1;locus_tag=A3216_02615;product=aminopeptidase N;protein_id=OAX71870.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 2793 3416 . + . ID=gene-A3216_02620;Name=A3216_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02620 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 2793 3416 . + 0 ID=cds-OAX71871.1;Parent=gene-A3216_02620;Dbxref=NCBI_GP:OAX71871.1;Name=OAX71871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908365.1;locus_tag=A3216_02620;product=disulfide bond formation protein DsbA;protein_id=OAX71871.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 3466 3945 . + . ID=gene-A3216_02625;Name=A3216_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02625 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 3466 3945 . + 0 ID=cds-OAX71872.1;Parent=gene-A3216_02625;Dbxref=NCBI_GP:OAX71872.1;Name=OAX71872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019738062.1;locus_tag=A3216_02625;product=ribose-5-phosphate isomerase;protein_id=OAX71872.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 3955 4773 . + . ID=gene-A3216_02630;Name=A3216_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02630;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 3955 4773 . + 0 ID=cds-A3216_02630;Parent=gene-A3216_02630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941616.1;locus_tag=A3216_02630;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 4811 5002 . + . ID=gene-A3216_02635;Name=A3216_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02635 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 4811 5002 . + 0 ID=cds-OAX71873.1;Parent=gene-A3216_02635;Dbxref=NCBI_GP:OAX71873.1;Name=OAX71873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02635;product=hypothetical protein;protein_id=OAX71873.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 6036 6106 . - . ID=gene-A3216_02640;Name=A3216_02640;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_02640 GCA_001648835.1|LVXE01000004.1 tRNAscan-SE tRNA 6036 6106 . - . ID=rna-A3216_02640;Parent=gene-A3216_02640;anticodon=(pos:complement(6072..6074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02640;product=tRNA-Gly GCA_001648835.1|LVXE01000004.1 tRNAscan-SE exon 6036 6106 . - . ID=exon-A3216_02640-1;Parent=rna-A3216_02640;anticodon=(pos:complement(6072..6074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02640;product=tRNA-Gly GCA_001648835.1|LVXE01000004.1 Genbank gene 6242 6318 . + . ID=gene-A3216_02645;Name=A3216_02645;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_02645 GCA_001648835.1|LVXE01000004.1 tRNAscan-SE tRNA 6242 6318 . + . ID=rna-A3216_02645;Parent=gene-A3216_02645;anticodon=(pos:6276..6278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02645;product=tRNA-Pro GCA_001648835.1|LVXE01000004.1 tRNAscan-SE exon 6242 6318 . + . ID=exon-A3216_02645-1;Parent=rna-A3216_02645;anticodon=(pos:6276..6278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_02645;product=tRNA-Pro GCA_001648835.1|LVXE01000004.1 Genbank gene 6351 7760 . + . ID=gene-A3216_02650;Name=A3216_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02650 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 6351 7760 . + 0 ID=cds-OAX71874.1;Parent=gene-A3216_02650;Dbxref=NCBI_GP:OAX71874.1;Name=OAX71874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBY2.1;locus_tag=A3216_02650;product=trigger factor;protein_id=OAX71874.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 7893 8486 . + . ID=gene-A3216_02655;Name=A3216_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02655 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 7893 8486 . + 0 ID=cds-OAX71948.1;Parent=gene-A3216_02655;Dbxref=NCBI_GP:OAX71948.1;Name=OAX71948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169488.1;locus_tag=A3216_02655;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OAX71948.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 8483 9127 . + . ID=gene-A3216_02660;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=A3216_02660 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 8483 9127 . + 0 ID=cds-OAX71875.1;Parent=gene-A3216_02660;Dbxref=NCBI_GP:OAX71875.1;Name=OAX71875.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBY4.1;locus_tag=A3216_02660;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OAX71875.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 9124 10005 . - . ID=gene-A3216_02665;Name=A3216_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02665 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 9124 10005 . - 0 ID=cds-OAX71876.1;Parent=gene-A3216_02665;Dbxref=NCBI_GP:OAX71876.1;Name=OAX71876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908360.1;locus_tag=A3216_02665;product=homocysteine S-methyltransferase;protein_id=OAX71876.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 10278 11558 . + . ID=gene-A3216_02670;Name=A3216_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02670 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 10278 11558 . + 0 ID=cds-OAX71877.1;Parent=gene-A3216_02670;Dbxref=NCBI_GP:OAX71877.1;Name=OAX71877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014816688.1;locus_tag=A3216_02670;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=OAX71877.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 12021 13423 . + . ID=gene-A3216_02675;Name=A3216_02675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02675;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 12021 13423 . + 0 ID=cds-A3216_02675;Parent=gene-A3216_02675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005067099.1;locus_tag=A3216_02675;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 13557 14629 . + . ID=gene-A3216_02680;Name=A3216_02680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02680;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 13557 14629 . + 0 ID=cds-A3216_02680;Parent=gene-A3216_02680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005258743.1;locus_tag=A3216_02680;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 14751 15249 . + . ID=gene-A3216_02685;Name=A3216_02685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02685;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 14751 15249 . + 0 ID=cds-A3216_02685;Parent=gene-A3216_02685;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382180.1;locus_tag=A3216_02685;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 17362 17607 . + . ID=gene-A3216_02690;Name=A3216_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02690 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 17362 17607 . + 0 ID=cds-OAX71878.1;Parent=gene-A3216_02690;Dbxref=NCBI_GP:OAX71878.1;Name=OAX71878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02690;product=hypothetical protein;protein_id=OAX71878.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 18233 20893 . + . ID=gene-A3216_02695;Name=A3216_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02695 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 18233 20893 . + 0 ID=cds-OAX71879.1;Parent=gene-A3216_02695;Dbxref=NCBI_GP:OAX71879.1;Name=OAX71879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBY7.1;locus_tag=A3216_02695;product=valine--tRNA ligase;protein_id=OAX71879.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 20890 22347 . + . ID=gene-A3216_02700;Name=A3216_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02700 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 20890 22347 . + 0 ID=cds-OAX71880.1;Parent=gene-A3216_02700;Dbxref=NCBI_GP:OAX71880.1;Name=OAX71880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908357.1;locus_tag=A3216_02700;product=dihydrofolate synthase;protein_id=OAX71880.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 22344 22715 . + . ID=gene-A3216_02705;Name=A3216_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02705 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 22344 22715 . + 0 ID=cds-OAX71881.1;Parent=gene-A3216_02705;Dbxref=NCBI_GP:OAX71881.1;Name=OAX71881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908356.1;locus_tag=A3216_02705;product=hypothetical protein;protein_id=OAX71881.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 22765 23175 . + . ID=gene-A3216_02710;Name=A3216_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02710 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 22765 23175 . + 0 ID=cds-OAX71882.1;Parent=gene-A3216_02710;Dbxref=NCBI_GP:OAX71882.1;Name=OAX71882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBZ0.1;locus_tag=A3216_02710;product=nucleoside-diphosphate kinase;protein_id=OAX71882.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 23518 26292 . + . ID=gene-A3216_02715;Name=A3216_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02715 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 23518 26292 . + 0 ID=cds-OAX71883.1;Parent=gene-A3216_02715;Dbxref=NCBI_GP:OAX71883.1;Name=OAX71883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908354.1;locus_tag=A3216_02715;product=ribonuclease;protein_id=OAX71883.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 26519 26830 . + . ID=gene-A3216_02720;Name=A3216_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02720 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 26519 26830 . + 0 ID=cds-OAX71884.1;Parent=gene-A3216_02720;Dbxref=NCBI_GP:OAX71884.1;Name=OAX71884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628764.1;locus_tag=A3216_02720;product=50S ribosomal protein L21;protein_id=OAX71884.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 26842 27108 . + . ID=gene-A3216_02725;Name=A3216_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02725 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 26842 27108 . + 0 ID=cds-OAX71885.1;Parent=gene-A3216_02725;Dbxref=NCBI_GP:OAX71885.1;Name=OAX71885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBZ3.1;locus_tag=A3216_02725;product=50S ribosomal protein L27;protein_id=OAX71885.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 27223 28662 . + . ID=gene-A3216_02730;Name=A3216_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02730 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 27223 28662 . + 0 ID=cds-OAX71886.1;Parent=gene-A3216_02730;Dbxref=NCBI_GP:OAX71886.1;Name=OAX71886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBZ4.1;locus_tag=A3216_02730;product=GTPase ObgE;protein_id=OAX71886.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 28666 29769 . + . ID=gene-A3216_02735;Name=A3216_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02735 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 28666 29769 . + 0 ID=cds-OAX71887.1;Parent=gene-A3216_02735;Dbxref=NCBI_GP:OAX71887.1;Name=OAX71887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBZ5.1;locus_tag=A3216_02735;product=glutamate 5-kinase;protein_id=OAX71887.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 29986 32028 . + . ID=gene-A3216_02740;Name=A3216_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02740 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 29986 32028 . + 0 ID=cds-OAX71888.1;Parent=gene-A3216_02740;Dbxref=NCBI_GP:OAX71888.1;Name=OAX71888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010949541.1;locus_tag=A3216_02740;product=NAD(+) synthase;protein_id=OAX71888.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 32390 32587 . + . ID=gene-A3216_02745;Name=A3216_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02745 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 32390 32587 . + 0 ID=cds-OAX71889.1;Parent=gene-A3216_02745;Dbxref=NCBI_GP:OAX71889.1;Name=OAX71889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02745;product=hypothetical protein;protein_id=OAX71889.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 32765 33548 . - . ID=gene-A3216_02750;Name=A3216_02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02750;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 32765 33548 . - 0 ID=cds-A3216_02750;Parent=gene-A3216_02750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875877.1;locus_tag=A3216_02750;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 34388 34894 . - . ID=gene-A3216_02755;Name=A3216_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02755 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 34388 34894 . - 0 ID=cds-OAX71890.1;Parent=gene-A3216_02755;Dbxref=NCBI_GP:OAX71890.1;Name=OAX71890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02755;product=hypothetical protein;protein_id=OAX71890.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 35469 37454 . + . ID=gene-A3216_02760;Name=A3216_02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02760;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 35469 37454 . + 0 ID=cds-A3216_02760;Parent=gene-A3216_02760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003902271.1;locus_tag=A3216_02760;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 38323 39582 . + . ID=gene-A3216_02765;Name=A3216_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02765 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 38323 39582 . + 0 ID=cds-OAX71891.1;Parent=gene-A3216_02765;Dbxref=NCBI_GP:OAX71891.1;Name=OAX71891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HME9.1;locus_tag=A3216_02765;product=glutamate-5-semialdehyde dehydrogenase;protein_id=OAX71891.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 39632 40517 . + . ID=gene-A3216_02770;Name=A3216_02770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02770;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 39632 40517 . + 0 ID=cds-A3216_02770;Parent=gene-A3216_02770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379687.1;locus_tag=A3216_02770;product=ATPase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 40548 41948 . + . ID=gene-A3216_02775;Name=A3216_02775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02775;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 40548 41948 . + 0 ID=cds-A3216_02775;Parent=gene-A3216_02775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011560918.1;locus_tag=A3216_02775;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 42742 43386 . + . ID=gene-A3216_02780;Name=A3216_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02780 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 42742 43386 . + 0 ID=cds-OAX71892.1;Parent=gene-A3216_02780;Dbxref=NCBI_GP:OAX71892.1;Name=OAX71892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBZ8.1;locus_tag=A3216_02780;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=OAX71892.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 43383 43772 . + . ID=gene-A3216_02785;Name=A3216_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02785 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 43383 43772 . + 0 ID=cds-OAX71893.1;Parent=gene-A3216_02785;Dbxref=NCBI_GP:OAX71893.1;Name=OAX71893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908346.1;locus_tag=A3216_02785;product=ribosome silencing factor;protein_id=OAX71893.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 43772 44446 . + . ID=gene-A3216_02790;Name=A3216_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02790 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 43772 44446 . + 0 ID=cds-OAX71894.1;Parent=gene-A3216_02790;Dbxref=NCBI_GP:OAX71894.1;Name=OAX71894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016706144.1;locus_tag=A3216_02790;product=histidine phosphatase;protein_id=OAX71894.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 44436 45179 . + . ID=gene-A3216_02795;Name=A3216_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02795 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 44436 45179 . + 0 ID=cds-OAX71895.1;Parent=gene-A3216_02795;Dbxref=NCBI_GP:OAX71895.1;Name=OAX71895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015293679.1;locus_tag=A3216_02795;product=lysophospholipase;protein_id=OAX71895.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 45262 45999 . + . ID=gene-A3216_02800;Name=A3216_02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02800;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 45262 45999 . + 0 ID=cds-A3216_02800;Parent=gene-A3216_02800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013828427.1;locus_tag=A3216_02800;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 46069 46296 . + . ID=gene-A3216_02805;Name=A3216_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02805 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 46069 46296 . + 0 ID=cds-OAX71896.1;Parent=gene-A3216_02805;Dbxref=NCBI_GP:OAX71896.1;Name=OAX71896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02805;product=hypothetical protein;protein_id=OAX71896.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 47885 48148 . - . ID=gene-A3216_02810;Name=A3216_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02810 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 47885 48148 . - 0 ID=cds-OAX71897.1;Parent=gene-A3216_02810;Dbxref=NCBI_GP:OAX71897.1;Name=OAX71897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02810;product=hypothetical protein;protein_id=OAX71897.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 48355 49075 . + . ID=gene-A3216_02815;Name=A3216_02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02815;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 48355 49075 . + 0 ID=cds-A3216_02815;Parent=gene-A3216_02815;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020729282.1;locus_tag=A3216_02815;product=precorrin-4 C(11)-methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 49871 50425 . - . ID=gene-A3216_02820;Name=A3216_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02820 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 49871 50425 . - 0 ID=cds-OAX71949.1;Parent=gene-A3216_02820;Dbxref=NCBI_GP:OAX71949.1;Name=OAX71949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908344.1;locus_tag=A3216_02820;product=RNA polymerase subunit sigma;protein_id=OAX71949.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 50845 51231 . + . ID=gene-A3216_02825;Name=A3216_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02825 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 50845 51231 . + 0 ID=cds-OAX71950.1;Parent=gene-A3216_02825;Dbxref=NCBI_GP:OAX71950.1;Name=OAX71950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908343.1;locus_tag=A3216_02825;product=PPOX class F420-dependent enzyme;protein_id=OAX71950.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 51454 51678 . + . ID=gene-A3216_02830;Name=A3216_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02830 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 51454 51678 . + 0 ID=cds-OAX71898.1;Parent=gene-A3216_02830;Dbxref=NCBI_GP:OAX71898.1;Name=OAX71898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908342.1;locus_tag=A3216_02830;product=hypothetical protein;protein_id=OAX71898.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 52036 52734 . - . ID=gene-A3216_02835;Name=A3216_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02835 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 52036 52734 . - 0 ID=cds-OAX71899.1;Parent=gene-A3216_02835;Dbxref=NCBI_GP:OAX71899.1;Name=OAX71899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908341.1;locus_tag=A3216_02835;product=carboxymethylenebutenolidase;protein_id=OAX71899.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 52788 53289 . + . ID=gene-A3216_02840;Name=A3216_02840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02840;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 52788 53289 . + 0 ID=cds-A3216_02840;Parent=gene-A3216_02840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015303357.1;locus_tag=A3216_02840;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 53323 54933 . + . ID=gene-A3216_02845;Name=A3216_02845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02845;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 53323 54933 . + 0 ID=cds-A3216_02845;Parent=gene-A3216_02845;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787232.1;locus_tag=A3216_02845;product=amidohydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 54926 56860 . + . ID=gene-A3216_02850;Name=A3216_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02850 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 54926 56860 . + 0 ID=cds-OAX71900.1;Parent=gene-A3216_02850;Dbxref=NCBI_GP:OAX71900.1;Name=OAX71900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908340.1;locus_tag=A3216_02850;product=apolipoprotein N-acyltransferase;protein_id=OAX71900.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 56857 57690 . + . ID=gene-A3216_02855;Name=A3216_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02855 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 56857 57690 . + 0 ID=cds-OAX71901.1;Parent=gene-A3216_02855;Dbxref=NCBI_GP:OAX71901.1;Name=OAX71901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908339.1;locus_tag=A3216_02855;product=dolichol-phosphate mannosyltransferase;protein_id=OAX71901.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 57647 57982 . - . ID=gene-A3216_02860;Name=A3216_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02860 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 57647 57982 . - 0 ID=cds-OAX71951.1;Parent=gene-A3216_02860;Dbxref=NCBI_GP:OAX71951.1;Name=OAX71951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245254.1;locus_tag=A3216_02860;product=hypothetical protein;protein_id=OAX71951.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 58751 63397 . + . ID=gene-A3216_02865;Name=A3216_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02865;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 58751 63397 . + 0 ID=cds-A3216_02865;Parent=gene-A3216_02865;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003902239.1;locus_tag=A3216_02865;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 63413 63931 . + . ID=gene-A3216_02870;Name=A3216_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02870 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 63413 63931 . + 0 ID=cds-OAX71902.1;Parent=gene-A3216_02870;Dbxref=NCBI_GP:OAX71902.1;Name=OAX71902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02870;product=hypothetical protein;protein_id=OAX71902.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 63952 64950 . + . ID=gene-A3216_02875;Name=A3216_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02875 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 63952 64950 . + 0 ID=cds-OAX71903.1;Parent=gene-A3216_02875;Dbxref=NCBI_GP:OAX71903.1;Name=OAX71903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02875;product=hypothetical protein;protein_id=OAX71903.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 65195 67521 . + . ID=gene-A3216_02880;Name=A3216_02880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02880;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 65195 67521 . + 0 ID=cds-A3216_02880;Parent=gene-A3216_02880;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015290361.1;locus_tag=A3216_02880;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 67855 68040 . - . ID=gene-A3216_02885;Name=A3216_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02885 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 67855 68040 . - 0 ID=cds-OAX71904.1;Parent=gene-A3216_02885;Dbxref=NCBI_GP:OAX71904.1;Name=OAX71904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02885;product=hypothetical protein;protein_id=OAX71904.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 68888 69121 . + . ID=gene-A3216_02890;Name=A3216_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02890 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 68888 69121 . + 0 ID=cds-OAX71905.1;Parent=gene-A3216_02890;Dbxref=NCBI_GP:OAX71905.1;Name=OAX71905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02890;product=hypothetical protein;protein_id=OAX71905.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 70296 70559 . + . ID=gene-A3216_02895;Name=A3216_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02895 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 70296 70559 . + 0 ID=cds-OAX71906.1;Parent=gene-A3216_02895;Dbxref=NCBI_GP:OAX71906.1;Name=OAX71906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02895;product=hypothetical protein;protein_id=OAX71906.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 71799 71990 . + . ID=gene-A3216_02900;Name=A3216_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02900 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 71799 71990 . + 0 ID=cds-OAX71907.1;Parent=gene-A3216_02900;Dbxref=NCBI_GP:OAX71907.1;Name=OAX71907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02900;product=hypothetical protein;protein_id=OAX71907.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 72711 73263 . + . ID=gene-A3216_02905;Name=A3216_02905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02905;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 72711 73263 . + 0 ID=cds-A3216_02905;Parent=gene-A3216_02905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256422.1;locus_tag=A3216_02905;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 73263 74004 . + . ID=gene-A3216_02910;Name=A3216_02910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02910;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 73263 74004 . + 0 ID=cds-A3216_02910;Parent=gene-A3216_02910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012394705.1;locus_tag=A3216_02910;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 74079 74405 . - . ID=gene-A3216_02915;Name=A3216_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02915 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 74079 74405 . - 0 ID=cds-OAX71908.1;Parent=gene-A3216_02915;Dbxref=NCBI_GP:OAX71908.1;Name=OAX71908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908337.1;locus_tag=A3216_02915;product=hypothetical protein;protein_id=OAX71908.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 74594 75569 . + . ID=gene-A3216_02920;Name=A3216_02920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_02920;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 74594 75569 . + 0 ID=cds-A3216_02920;Parent=gene-A3216_02920;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956373.1;locus_tag=A3216_02920;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 75559 76896 . + . ID=gene-A3216_02925;Name=A3216_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02925 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 75559 76896 . + 0 ID=cds-OAX71909.1;Parent=gene-A3216_02925;Dbxref=NCBI_GP:OAX71909.1;Name=OAX71909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380070.1;locus_tag=A3216_02925;product=ABC transporter;protein_id=OAX71909.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 76893 77852 . + . ID=gene-A3216_02930;Name=A3216_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02930 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 76893 77852 . + 0 ID=cds-OAX71910.1;Parent=gene-A3216_02930;Dbxref=NCBI_GP:OAX71910.1;Name=OAX71910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908335.1;locus_tag=A3216_02930;product=ABC transporter permease;protein_id=OAX71910.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 77839 78690 . + . ID=gene-A3216_02935;Name=A3216_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02935 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 77839 78690 . + 0 ID=cds-OAX71911.1;Parent=gene-A3216_02935;Dbxref=NCBI_GP:OAX71911.1;Name=OAX71911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908334.1;locus_tag=A3216_02935;product=sugar ABC transporter permease;protein_id=OAX71911.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 78693 79763 . + . ID=gene-A3216_02940;Name=A3216_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02940 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 78693 79763 . + 0 ID=cds-OAX71912.1;Parent=gene-A3216_02940;Dbxref=NCBI_GP:OAX71912.1;Name=OAX71912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908333.1;locus_tag=A3216_02940;product=sugar ABC transporter ATP-binding protein;protein_id=OAX71912.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 79833 80822 . + . ID=gene-A3216_02945;Name=A3216_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02945 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 79833 80822 . + 0 ID=cds-OAX71913.1;Parent=gene-A3216_02945;Dbxref=NCBI_GP:OAX71913.1;Name=OAX71913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908332.1;locus_tag=A3216_02945;product=hypothetical protein;protein_id=OAX71913.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 80927 81400 . - . ID=gene-A3216_02950;Name=A3216_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02950 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 80927 81400 . - 0 ID=cds-OAX71914.1;Parent=gene-A3216_02950;Dbxref=NCBI_GP:OAX71914.1;Name=OAX71914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02950;product=hypothetical protein;protein_id=OAX71914.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 83099 83743 . - . ID=gene-A3216_02955;Name=A3216_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02955 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 83099 83743 . - 0 ID=cds-OAX71915.1;Parent=gene-A3216_02955;Dbxref=NCBI_GP:OAX71915.1;Name=OAX71915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02955;product=hypothetical protein;protein_id=OAX71915.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 84002 84220 . + . ID=gene-A3216_02960;Name=A3216_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02960 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 84002 84220 . + 0 ID=cds-OAX71916.1;Parent=gene-A3216_02960;Dbxref=NCBI_GP:OAX71916.1;Name=OAX71916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02960;product=hypothetical protein;protein_id=OAX71916.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 84585 84938 . - . ID=gene-A3216_02965;Name=A3216_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02965 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 84585 84938 . - 0 ID=cds-OAX71917.1;Parent=gene-A3216_02965;Dbxref=NCBI_GP:OAX71917.1;Name=OAX71917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908331.1;locus_tag=A3216_02965;product=hypothetical protein;protein_id=OAX71917.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 85284 86975 . + . ID=gene-A3216_02970;Name=A3216_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02970 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 85284 86975 . + 0 ID=cds-OAX71918.1;Parent=gene-A3216_02970;Dbxref=NCBI_GP:OAX71918.1;Name=OAX71918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908330.1;locus_tag=A3216_02970;product=diguanylate cyclase;protein_id=OAX71918.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 90017 90565 . + . ID=gene-A3216_02975;Name=A3216_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02975 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 90017 90565 . + 0 ID=cds-OAX71919.1;Parent=gene-A3216_02975;Dbxref=NCBI_GP:OAX71919.1;Name=OAX71919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011740216.1;locus_tag=A3216_02975;product=alkyl hydroperoxide reductase;protein_id=OAX71919.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 90807 91613 . - . ID=gene-A3216_02980;Name=A3216_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02980 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 90807 91613 . - 0 ID=cds-OAX71920.1;Parent=gene-A3216_02980;Dbxref=NCBI_GP:OAX71920.1;Name=OAX71920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC08.1;locus_tag=A3216_02980;product=CDP-diacylglycerol diphosphatase;protein_id=OAX71920.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 92068 92259 . - . ID=gene-A3216_02985;Name=A3216_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02985 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 92068 92259 . - 0 ID=cds-OAX71921.1;Parent=gene-A3216_02985;Dbxref=NCBI_GP:OAX71921.1;Name=OAX71921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02985;product=hypothetical protein;protein_id=OAX71921.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 92925 93149 . - . ID=gene-A3216_02990;Name=A3216_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02990 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 92925 93149 . - 0 ID=cds-OAX71922.1;Parent=gene-A3216_02990;Dbxref=NCBI_GP:OAX71922.1;Name=OAX71922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02990;product=hypothetical protein;protein_id=OAX71922.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 93914 94171 . - . ID=gene-A3216_02995;Name=A3216_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_02995 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 93914 94171 . - 0 ID=cds-OAX71923.1;Parent=gene-A3216_02995;Dbxref=NCBI_GP:OAX71923.1;Name=OAX71923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_02995;product=hypothetical protein;protein_id=OAX71923.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 94479 94817 . - . ID=gene-A3216_03000;Name=A3216_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03000 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 94479 94817 . - 0 ID=cds-OAX71924.1;Parent=gene-A3216_03000;Dbxref=NCBI_GP:OAX71924.1;Name=OAX71924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03000;product=hypothetical protein;protein_id=OAX71924.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 94965 96377 . - . ID=gene-A3216_03005;Name=A3216_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03005 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 94965 96377 . - 0 ID=cds-OAX71925.1;Parent=gene-A3216_03005;Dbxref=NCBI_GP:OAX71925.1;Name=OAX71925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015306989.1;locus_tag=A3216_03005;product=argininosuccinate lyase;protein_id=OAX71925.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 96449 97645 . - . ID=gene-A3216_03010;Name=A3216_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03010 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 96449 97645 . - 0 ID=cds-OAX71926.1;Parent=gene-A3216_03010;Dbxref=NCBI_GP:OAX71926.1;Name=OAX71926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787650.1;locus_tag=A3216_03010;product=argininosuccinate synthase;protein_id=OAX71926.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 97658 98161 . - . ID=gene-A3216_03015;Name=A3216_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03015 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 97658 98161 . - 0 ID=cds-OAX71927.1;Parent=gene-A3216_03015;Dbxref=NCBI_GP:OAX71927.1;Name=OAX71927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57992.1;locus_tag=A3216_03015;product=arginine repressor;protein_id=OAX71927.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 98164 99084 . - . ID=gene-A3216_03020;Name=A3216_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03020 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 98164 99084 . - 0 ID=cds-OAX71928.1;Parent=gene-A3216_03020;Dbxref=NCBI_GP:OAX71928.1;Name=OAX71928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0PP77.1;locus_tag=A3216_03020;product=ornithine carbamoyltransferase;protein_id=OAX71928.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 99158 100372 . - . ID=gene-A3216_03025;Name=A3216_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03025 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 99158 100372 . - 0 ID=cds-OAX71929.1;Parent=gene-A3216_03025;Dbxref=NCBI_GP:OAX71929.1;Name=OAX71929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC12.1;locus_tag=A3216_03025;product=acetylornithine aminotransferase;protein_id=OAX71929.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 100424 101317 . - . ID=gene-A3216_03030;Name=A3216_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03030 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 100424 101317 . - 0 ID=cds-OAX71953.1;Parent=gene-A3216_03030;Dbxref=NCBI_GP:OAX71953.1;Name=OAX71953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954340.1;locus_tag=A3216_03030;product=acetylglutamate kinase;protein_id=OAX71953.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 101326 102540 . - . ID=gene-A3216_03035;Name=A3216_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03035 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 101326 102540 . - 0 ID=cds-OAX71952.1;Parent=gene-A3216_03035;Dbxref=NCBI_GP:OAX71952.1;Name=OAX71952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015306983.1;locus_tag=A3216_03035;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=OAX71952.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 102546 103589 . - . ID=gene-A3216_03040;Name=A3216_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03040 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 102546 103589 . - 0 ID=cds-OAX71930.1;Parent=gene-A3216_03040;Dbxref=NCBI_GP:OAX71930.1;Name=OAX71930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008257627.1;locus_tag=A3216_03040;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=OAX71930.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 103802 105006 . + . ID=gene-A3216_03045;Name=A3216_03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03045;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 103802 105006 . + 0 ID=cds-A3216_03045;Parent=gene-A3216_03045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019750077.1;locus_tag=A3216_03045;product=transposase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 105731 106096 . - . ID=gene-A3216_03050;Name=A3216_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03050 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 105731 106096 . - 0 ID=cds-OAX71931.1;Parent=gene-A3216_03050;Dbxref=NCBI_GP:OAX71931.1;Name=OAX71931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03050;product=hypothetical protein;protein_id=OAX71931.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 106665 109172 . - . ID=gene-A3216_03055;Name=A3216_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03055 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 106665 109172 . - 0 ID=cds-OAX71932.1;Parent=gene-A3216_03055;Dbxref=NCBI_GP:OAX71932.1;Name=OAX71932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739756.1;locus_tag=A3216_03055;product=phenylalanine--tRNA ligase subunit beta;protein_id=OAX71932.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 109172 110224 . - . ID=gene-A3216_03060;Name=A3216_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03060 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 109172 110224 . - 0 ID=cds-OAX71954.1;Parent=gene-A3216_03060;Dbxref=NCBI_GP:OAX71954.1;Name=OAX71954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007776044.1;locus_tag=A3216_03060;product=phenylalanine--tRNA ligase subunit alpha;protein_id=OAX71954.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 110668 110871 . + . ID=gene-A3216_03065;Name=A3216_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03065 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 110668 110871 . + 0 ID=cds-OAX71933.1;Parent=gene-A3216_03065;Dbxref=NCBI_GP:OAX71933.1;Name=OAX71933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03065;product=hypothetical protein;protein_id=OAX71933.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 111073 112047 . - . ID=gene-A3216_03070;Name=A3216_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03070 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 111073 112047 . - 0 ID=cds-OAX71934.1;Parent=gene-A3216_03070;Dbxref=NCBI_GP:OAX71934.1;Name=OAX71934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908317.1;locus_tag=A3216_03070;product=guanylate cyclase;protein_id=OAX71934.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 112207 113131 . + . ID=gene-A3216_03075;Name=A3216_03075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03075;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 112207 113131 . + 0 ID=cds-A3216_03075;Parent=gene-A3216_03075;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009977310.1;locus_tag=A3216_03075;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 113375 114154 . - . ID=gene-A3216_03080;Name=A3216_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03080 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 113375 114154 . - 0 ID=cds-OAX71955.1;Parent=gene-A3216_03080;Dbxref=NCBI_GP:OAX71955.1;Name=OAX71955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908316.1;locus_tag=A3216_03080;product=RNA methyltransferase;protein_id=OAX71955.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 114209 114598 . - . ID=gene-A3216_03085;Name=A3216_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03085 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 114209 114598 . - 0 ID=cds-OAX71935.1;Parent=gene-A3216_03085;Dbxref=NCBI_GP:OAX71935.1;Name=OAX71935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015290017.1;locus_tag=A3216_03085;product=50S ribosomal protein L20;protein_id=OAX71935.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 114652 114846 . - . ID=gene-A3216_03090;Name=A3216_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03090 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 114652 114846 . - 0 ID=cds-OAX71936.1;Parent=gene-A3216_03090;Dbxref=NCBI_GP:OAX71936.1;Name=OAX71936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908314.1;locus_tag=A3216_03090;product=50S ribosomal protein L35;protein_id=OAX71936.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 114897 115454 . - . ID=gene-A3216_03095;Name=A3216_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03095 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 114897 115454 . - 0 ID=cds-OAX71937.1;Parent=gene-A3216_03095;Dbxref=NCBI_GP:OAX71937.1;Name=OAX71937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908313.1;locus_tag=A3216_03095;product=translation initiation factor IF-3;protein_id=OAX71937.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 116219 119338 . + . ID=gene-A3216_03100;Name=A3216_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03100 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 116219 119338 . + 0 ID=cds-OAX71956.1;Parent=gene-A3216_03100;Dbxref=NCBI_GP:OAX71956.1;Name=OAX71956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908312.1;locus_tag=A3216_03100;product=lysine--tRNA ligase;protein_id=OAX71956.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 120015 122924 . - . ID=gene-A3216_03105;Name=A3216_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03105 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 120015 122924 . - 0 ID=cds-OAX71938.1;Parent=gene-A3216_03105;Dbxref=NCBI_GP:OAX71938.1;Name=OAX71938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC24.1;locus_tag=A3216_03105;product=excinuclease ABC subunit A;protein_id=OAX71938.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 123062 123760 . + . ID=gene-A3216_03110;Name=A3216_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03110 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 123062 123760 . + 0 ID=cds-OAX71939.1;Parent=gene-A3216_03110;Dbxref=NCBI_GP:OAX71939.1;Name=OAX71939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908310.1;locus_tag=A3216_03110;product=Zn-dependent hydrolase;protein_id=OAX71939.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 123769 124212 . - . ID=gene-A3216_03115;Name=A3216_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03115 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 123769 124212 . - 0 ID=cds-OAX71940.1;Parent=gene-A3216_03115;Dbxref=NCBI_GP:OAX71940.1;Name=OAX71940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908309.1;locus_tag=A3216_03115;product=universal stress protein;protein_id=OAX71940.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 124504 126087 . + . ID=gene-A3216_03120;Name=A3216_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03120 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 124504 126087 . + 0 ID=cds-OAX71941.1;Parent=gene-A3216_03120;Dbxref=NCBI_GP:OAX71941.1;Name=OAX71941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908308.1;locus_tag=A3216_03120;product=hypothetical protein;protein_id=OAX71941.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 126095 127464 . - . ID=gene-A3216_03125;Name=A3216_03125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03125;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 126095 127464 . - 0 ID=cds-A3216_03125;Parent=gene-A3216_03125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014390176.1;locus_tag=A3216_03125;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 127500 129659 . - . ID=gene-A3216_03130;Name=A3216_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03130 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 127500 129659 . - 0 ID=cds-OAX71942.1;Parent=gene-A3216_03130;Dbxref=NCBI_GP:OAX71942.1;Name=OAX71942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954231.1;locus_tag=A3216_03130;product=excinuclease ABC subunit B;protein_id=OAX71942.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 129762 131795 . - . ID=gene-A3216_03135;Name=A3216_03135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03135;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 129762 131795 . - 0 ID=cds-A3216_03135;Parent=gene-A3216_03135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380346.1;locus_tag=A3216_03135;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank pseudogene 132578 134638 . + . ID=gene-A3216_03140;Name=A3216_03140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03140;pseudo=true GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 132578 134638 . + 0 ID=cds-A3216_03140;Parent=gene-A3216_03140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019306665.1;locus_tag=A3216_03140;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 134731 135174 . + . ID=gene-A3216_03145;Name=A3216_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03145 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 134731 135174 . + 0 ID=cds-OAX71943.1;Parent=gene-A3216_03145;Dbxref=NCBI_GP:OAX71943.1;Name=OAX71943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003898953.1;locus_tag=A3216_03145;product=hypothetical protein;protein_id=OAX71943.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 135354 135779 . - . ID=gene-A3216_03150;Name=A3216_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03150 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 135354 135779 . - 0 ID=cds-OAX71944.1;Parent=gene-A3216_03150;Dbxref=NCBI_GP:OAX71944.1;Name=OAX71944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03150;product=hypothetical protein;protein_id=OAX71944.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 135829 137061 . - . ID=gene-A3216_03155;Name=A3216_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03155 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 135829 137061 . - 0 ID=cds-OAX71945.1;Parent=gene-A3216_03155;Dbxref=NCBI_GP:OAX71945.1;Name=OAX71945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50178.1;locus_tag=A3216_03155;product=dephospho-CoA kinase;protein_id=OAX71945.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 137088 138533 . - . ID=gene-A3216_03160;Name=A3216_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03160 GCA_001648835.1|LVXE01000004.1 Protein Homology CDS 137088 138533 . - 0 ID=cds-OAX71946.1;Parent=gene-A3216_03160;Dbxref=NCBI_GP:OAX71946.1;Name=OAX71946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019511500.1;locus_tag=A3216_03160;product=30S ribosomal protein S1;protein_id=OAX71946.1;transl_table=11 GCA_001648835.1|LVXE01000004.1 Genbank gene 139201 139440 . + . ID=gene-A3216_03165;Name=A3216_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03165 GCA_001648835.1|LVXE01000004.1 GeneMarkS+ CDS 139201 139440 . + 0 ID=cds-OAX71947.1;Parent=gene-A3216_03165;Dbxref=NCBI_GP:OAX71947.1;Name=OAX71947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03165;product=hypothetical protein;protein_id=OAX71947.1;transl_table=11 ##sequence-region LVXE01000040.1 1 26017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000040.1 Genbank region 1 26017 . + . ID=LVXE01000040.1:1..26017;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000040.1 Genbank pseudogene 1 500 . - . ID=gene-A3216_10290;Name=A3216_10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10290;pseudo=true GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 1 500 . - 0 ID=cds-A3216_10290;Parent=gene-A3216_10290;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908184.1;locus_tag=A3216_10290;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 557 856 . - . ID=gene-A3216_10295;Name=A3216_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10295 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 557 856 . - 0 ID=cds-OAX70705.1;Parent=gene-A3216_10295;Dbxref=NCBI_GP:OAX70705.1;Name=OAX70705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908098.1;locus_tag=A3216_10295;product=hypothetical protein;protein_id=OAX70705.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank pseudogene 1836 2944 . - . ID=gene-A3216_10300;Name=A3216_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10300;pseudo=true GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 1836 2944 . - 0 ID=cds-A3216_10300;Parent=gene-A3216_10300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975821.1;locus_tag=A3216_10300;product=alcohol dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 5007 5309 . - . ID=gene-A3216_10305;Name=A3216_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10305 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 5007 5309 . - 0 ID=cds-OAX70706.1;Parent=gene-A3216_10305;Dbxref=NCBI_GP:OAX70706.1;Name=OAX70706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908185.1;locus_tag=A3216_10305;product=hypothetical protein;protein_id=OAX70706.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 5836 6033 . - . ID=gene-A3216_10310;Name=A3216_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10310 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 5836 6033 . - 0 ID=cds-OAX70707.1;Parent=gene-A3216_10310;Dbxref=NCBI_GP:OAX70707.1;Name=OAX70707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10310;product=hypothetical protein;protein_id=OAX70707.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 6329 6601 . - . ID=gene-A3216_10315;Name=A3216_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10315 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 6329 6601 . - 0 ID=cds-OAX70708.1;Parent=gene-A3216_10315;Dbxref=NCBI_GP:OAX70708.1;Name=OAX70708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10315;product=hypothetical protein;protein_id=OAX70708.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 7912 8154 . - . ID=gene-A3216_10320;Name=A3216_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10320 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 7912 8154 . - 0 ID=cds-OAX70709.1;Parent=gene-A3216_10320;Dbxref=NCBI_GP:OAX70709.1;Name=OAX70709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10320;product=hypothetical protein;protein_id=OAX70709.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 8316 8543 . + . ID=gene-A3216_10325;Name=A3216_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10325 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 8316 8543 . + 0 ID=cds-OAX70710.1;Parent=gene-A3216_10325;Dbxref=NCBI_GP:OAX70710.1;Name=OAX70710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10325;product=hypothetical protein;protein_id=OAX70710.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 8826 9086 . - . ID=gene-A3216_10330;Name=A3216_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10330 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 8826 9086 . - 0 ID=cds-OAX70711.1;Parent=gene-A3216_10330;Dbxref=NCBI_GP:OAX70711.1;Name=OAX70711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908186.1;locus_tag=A3216_10330;product=hypothetical protein;protein_id=OAX70711.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 10724 11107 . - . ID=gene-A3216_10335;Name=A3216_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10335 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 10724 11107 . - 0 ID=cds-OAX70712.1;Parent=gene-A3216_10335;Dbxref=NCBI_GP:OAX70712.1;Name=OAX70712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908187.1;locus_tag=A3216_10335;product=hypothetical protein;protein_id=OAX70712.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 11106 11342 . + . ID=gene-A3216_10340;Name=A3216_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10340 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 11106 11342 . + 0 ID=cds-OAX70713.1;Parent=gene-A3216_10340;Dbxref=NCBI_GP:OAX70713.1;Name=OAX70713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10340;product=hypothetical protein;protein_id=OAX70713.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 11738 12007 . - . ID=gene-A3216_10345;Name=A3216_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10345 GCA_001648835.1|LVXE01000040.1 GeneMarkS+ CDS 11738 12007 . - 0 ID=cds-OAX70714.1;Parent=gene-A3216_10345;Dbxref=NCBI_GP:OAX70714.1;Name=OAX70714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10345;product=hypothetical protein;protein_id=OAX70714.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank pseudogene 12035 13354 . + . ID=gene-A3216_10350;Name=A3216_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10350;pseudo=true GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 12035 13354 . + 0 ID=cds-A3216_10350;Parent=gene-A3216_10350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379644.1;locus_tag=A3216_10350;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 13522 14241 . + . ID=gene-A3216_10355;Name=A3216_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10355 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 13522 14241 . + 0 ID=cds-OAX70715.1;Parent=gene-A3216_10355;Dbxref=NCBI_GP:OAX70715.1;Name=OAX70715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003412957.1;locus_tag=A3216_10355;product=hypothetical protein;protein_id=OAX70715.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 14853 24083 . + . ID=gene-A3216_10360;Name=A3216_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10360 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 14853 24083 . + 0 ID=cds-OAX70716.1;Parent=gene-A3216_10360;Dbxref=NCBI_GP:OAX70716.1;Name=OAX70716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908189.1;locus_tag=A3216_10360;product=3-oxoacyl-ACP synthase;protein_id=OAX70716.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 24112 24504 . + . ID=gene-A3216_10365;Name=A3216_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10365 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 24112 24504 . + 0 ID=cds-OAX70717.1;Parent=gene-A3216_10365;Dbxref=NCBI_GP:OAX70717.1;Name=OAX70717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7E3.1;locus_tag=A3216_10365;product=holo-ACP synthase;protein_id=OAX70717.1;transl_table=11 GCA_001648835.1|LVXE01000040.1 Genbank gene 24594 25922 . + . ID=gene-A3216_10370;Name=A3216_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10370 GCA_001648835.1|LVXE01000040.1 Protein Homology CDS 24594 25922 . + 0 ID=cds-OAX70718.1;Parent=gene-A3216_10370;Dbxref=NCBI_GP:OAX70718.1;Name=OAX70718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908191.1;locus_tag=A3216_10370;product=dipeptidase;protein_id=OAX70718.1;transl_table=11 ##sequence-region LVXE01000041.1 1 25574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000041.1 Genbank region 1 25574 . + . ID=LVXE01000041.1:1..25574;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000041.1 Genbank gene 265 1941 . - . ID=gene-A3216_10375;Name=A3216_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10375 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 265 1941 . - 0 ID=cds-OAX70688.1;Parent=gene-A3216_10375;Dbxref=NCBI_GP:OAX70688.1;Name=OAX70688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015303570.1;locus_tag=A3216_10375;product=ribonuclease J;protein_id=OAX70688.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 1961 2863 . - . ID=gene-A3216_10380;Name=A3216_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10380 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 1961 2863 . - 0 ID=cds-OAX70698.1;Parent=gene-A3216_10380;Dbxref=NCBI_GP:OAX70698.1;Name=OAX70698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380621.1;locus_tag=A3216_10380;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=OAX70698.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 2979 3743 . - . ID=gene-A3216_10385;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=A3216_10385 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 2979 3743 . - 0 ID=cds-OAX70699.1;Parent=gene-A3216_10385;Dbxref=NCBI_GP:OAX70699.1;Name=OAX70699.1;Note=flavin dependent thymidylate synthase%3B ThyX%3B thymidylate synthase complementing protein%3B catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate%3B the enzyme from Mycobacterium tuberculosis forms homotetramers%3B uses FAD as a cofactor;gbkey=CDS;gene=thyX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003414053.1;locus_tag=A3216_10385;product=FAD-dependent thymidylate synthase;protein_id=OAX70699.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 4096 4278 . - . ID=gene-A3216_10390;Name=A3216_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10390 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 4096 4278 . - 0 ID=cds-OAX70689.1;Parent=gene-A3216_10390;Dbxref=NCBI_GP:OAX70689.1;Name=OAX70689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10390;product=hypothetical protein;protein_id=OAX70689.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 4404 4760 . - . ID=gene-A3216_10395;Name=A3216_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10395 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 4404 4760 . - 0 ID=cds-OAX70690.1;Parent=gene-A3216_10395;Dbxref=NCBI_GP:OAX70690.1;Name=OAX70690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10395;product=hypothetical protein;protein_id=OAX70690.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 5918 6121 . - . ID=gene-A3216_10400;Name=A3216_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10400 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 5918 6121 . - 0 ID=cds-OAX70691.1;Parent=gene-A3216_10400;Dbxref=NCBI_GP:OAX70691.1;Name=OAX70691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10400;product=hypothetical protein;protein_id=OAX70691.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 6225 7132 . - . ID=gene-A3216_10405;Name=A3216_10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10405;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 6225 7132 . - 0 ID=cds-A3216_10405;Parent=gene-A3216_10405;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171527.1;locus_tag=A3216_10405;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 7304 8489 . - . ID=gene-A3216_10410;Name=A3216_10410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10410;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 7304 8489 . - 0 ID=cds-A3216_10410;Parent=gene-A3216_10410;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003414057.1;locus_tag=A3216_10410;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 8727 9008 . - . ID=gene-A3216_10415;Name=A3216_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10415 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 8727 9008 . - 0 ID=cds-OAX70692.1;Parent=gene-A3216_10415;Dbxref=NCBI_GP:OAX70692.1;Name=OAX70692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908383.1;locus_tag=A3216_10415;product=hypothetical protein;protein_id=OAX70692.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 9325 9747 . - . ID=gene-A3216_10420;Name=A3216_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10420 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 9325 9747 . - 0 ID=cds-OAX70693.1;Parent=gene-A3216_10420;Dbxref=NCBI_GP:OAX70693.1;Name=OAX70693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10420;product=hypothetical protein;protein_id=OAX70693.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 9810 10307 . - . ID=gene-A3216_10425;Name=A3216_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10425 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 9810 10307 . - 0 ID=cds-OAX70700.1;Parent=gene-A3216_10425;Dbxref=NCBI_GP:OAX70700.1;Name=OAX70700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBW1.1;locus_tag=A3216_10425;product=dihydrofolate reductase;protein_id=OAX70700.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 10360 11160 . - . ID=gene-A3216_10430;Name=A3216_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10430 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 10360 11160 . - 0 ID=cds-OAX70694.1;Parent=gene-A3216_10430;Dbxref=NCBI_GP:OAX70694.1;Name=OAX70694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73VZ2.1;locus_tag=A3216_10430;product=thymidylate synthase;protein_id=OAX70694.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 11463 11681 . + . ID=gene-A3216_10435;Name=A3216_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10435 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 11463 11681 . + 0 ID=cds-OAX70695.1;Parent=gene-A3216_10435;Dbxref=NCBI_GP:OAX70695.1;Name=OAX70695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10435;product=hypothetical protein;protein_id=OAX70695.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 12072 13086 . - . ID=gene-A3216_10440;Name=A3216_10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10440;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 12072 13086 . - 0 ID=cds-A3216_10440;Parent=gene-A3216_10440;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020728364.1;locus_tag=A3216_10440;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 13083 14287 . - . ID=gene-A3216_10445;Name=A3216_10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10445;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 13083 14287 . - 0 ID=cds-A3216_10445;Parent=gene-A3216_10445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014380628.1;locus_tag=A3216_10445;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 15154 15444 . - . ID=gene-A3216_10450;Name=A3216_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10450 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 15154 15444 . - 0 ID=cds-OAX70696.1;Parent=gene-A3216_10450;Dbxref=NCBI_GP:OAX70696.1;Name=OAX70696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908386.1;locus_tag=A3216_10450;product=hypothetical protein;protein_id=OAX70696.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 16505 16705 . - . ID=gene-A3216_10455;Name=A3216_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10455 GCA_001648835.1|LVXE01000041.1 GeneMarkS+ CDS 16505 16705 . - 0 ID=cds-OAX70697.1;Parent=gene-A3216_10455;Dbxref=NCBI_GP:OAX70697.1;Name=OAX70697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10455;product=hypothetical protein;protein_id=OAX70697.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 17345 17800 . - . ID=gene-A3216_10460;Name=A3216_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10460 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 17345 17800 . - 0 ID=cds-OAX70701.1;Parent=gene-A3216_10460;Dbxref=NCBI_GP:OAX70701.1;Name=OAX70701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908387.1;locus_tag=A3216_10460;product=flavodoxin;protein_id=OAX70701.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 17808 18275 . - . ID=gene-A3216_10465;Name=A3216_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10465 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 17808 18275 . - 0 ID=cds-OAX70702.1;Parent=gene-A3216_10465;Dbxref=NCBI_GP:OAX70702.1;Name=OAX70702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382935.1;locus_tag=A3216_10465;product=hypothetical protein;protein_id=OAX70702.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 18287 19024 . - . ID=gene-A3216_10470;Name=A3216_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10470 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 18287 19024 . - 0 ID=cds-OAX70703.1;Parent=gene-A3216_10470;Dbxref=NCBI_GP:OAX70703.1;Name=OAX70703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020728356.1;locus_tag=A3216_10470;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=OAX70703.1;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 19917 21024 . + . ID=gene-A3216_10475;Name=A3216_10475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10475;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 19917 21024 . + 0 ID=cds-A3216_10475;Parent=gene-A3216_10475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015291857.1;locus_tag=A3216_10475;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 21258 22195 . - . ID=gene-A3216_10480;Name=A3216_10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10480;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 21258 22195 . - 0 ID=cds-A3216_10480;Parent=gene-A3216_10480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008258653.1;locus_tag=A3216_10480;product=oxidoreductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 22747 23635 . - . ID=gene-A3216_10485;Name=A3216_10485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10485;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 22747 23635 . - 0 ID=cds-A3216_10485;Parent=gene-A3216_10485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772991.1;locus_tag=A3216_10485;product=metal-dependent hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank pseudogene 23663 24094 . - . ID=gene-A3216_10490;Name=A3216_10490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10490;pseudo=true GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 23663 24094 . - 0 ID=cds-A3216_10490;Parent=gene-A3216_10490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393721.1;locus_tag=A3216_10490;product=AsnC family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000041.1 Genbank gene 24301 25416 . + . ID=gene-A3216_10495;Name=A3216_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10495 GCA_001648835.1|LVXE01000041.1 Protein Homology CDS 24301 25416 . + 0 ID=cds-OAX70704.1;Parent=gene-A3216_10495;Dbxref=NCBI_GP:OAX70704.1;Name=OAX70704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908389.1;locus_tag=A3216_10495;product=alanine dehydrogenase;protein_id=OAX70704.1;transl_table=11 ##sequence-region LVXE01000042.1 1 25432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000042.1 Genbank region 1 25432 . + . ID=LVXE01000042.1:1..25432;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000042.1 Genbank gene 522 728 . + . ID=gene-A3216_10500;Name=A3216_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10500 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 522 728 . + 0 ID=cds-OAX70669.1;Parent=gene-A3216_10500;Dbxref=NCBI_GP:OAX70669.1;Name=OAX70669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10500;product=hypothetical protein;protein_id=OAX70669.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 1001 1201 . - . ID=gene-A3216_10505;Name=A3216_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10505 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 1001 1201 . - 0 ID=cds-OAX70670.1;Parent=gene-A3216_10505;Dbxref=NCBI_GP:OAX70670.1;Name=OAX70670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10505;product=hypothetical protein;protein_id=OAX70670.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 1494 1739 . - . ID=gene-A3216_10510;Name=A3216_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10510 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 1494 1739 . - 0 ID=cds-OAX70671.1;Parent=gene-A3216_10510;Dbxref=NCBI_GP:OAX70671.1;Name=OAX70671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10510;product=hypothetical protein;protein_id=OAX70671.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 3507 4016 . + . ID=gene-A3216_10515;Name=A3216_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10515 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 3507 4016 . + 0 ID=cds-OAX70687.1;Parent=gene-A3216_10515;Dbxref=NCBI_GP:OAX70687.1;Name=OAX70687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907494.1;locus_tag=A3216_10515;product=hypothetical protein;protein_id=OAX70687.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 4013 5734 . + . ID=gene-A3216_10520;Name=A3216_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10520 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 4013 5734 . + 0 ID=cds-OAX70672.1;Parent=gene-A3216_10520;Dbxref=NCBI_GP:OAX70672.1;Name=OAX70672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33089.1;locus_tag=A3216_10520;product=type VII secretion AAA-ATPase EccA;protein_id=OAX70672.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 5738 7183 . + . ID=gene-A3216_10525;Name=A3216_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10525 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 5738 7183 . + 0 ID=cds-OAX70673.1;Parent=gene-A3216_10525;Dbxref=NCBI_GP:OAX70673.1;Name=OAX70673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907492.1;locus_tag=A3216_10525;product=type VII secretion protein EccB;protein_id=OAX70673.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 7180 9414 . + . ID=gene-A3216_10530;Name=A3216_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10530 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 7180 9414 . + 0 ID=cds-OAX70674.1;Parent=gene-A3216_10530;Dbxref=NCBI_GP:OAX70674.1;Name=OAX70674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907491.1;locus_tag=A3216_10530;product=type VII secretion protein EccCa;protein_id=OAX70674.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 9488 11281 . + . ID=gene-A3216_10535;Name=A3216_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10535 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 9488 11281 . + 0 ID=cds-OAX70675.1;Parent=gene-A3216_10535;Dbxref=NCBI_GP:OAX70675.1;Name=OAX70675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907490.1;locus_tag=A3216_10535;product=type VII secretion protein EccCb;protein_id=OAX70675.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 11491 12399 . + . ID=gene-A3216_10540;Name=A3216_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10540 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 11491 12399 . + 0 ID=cds-OAX70676.1;Parent=gene-A3216_10540;Dbxref=NCBI_GP:OAX70676.1;Name=OAX70676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907489.1;locus_tag=A3216_10540;product=hypothetical protein;protein_id=OAX70676.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 12578 12880 . + . ID=gene-A3216_10545;Name=A3216_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10545 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 12578 12880 . + 0 ID=cds-OAX70677.1;Parent=gene-A3216_10545;Dbxref=NCBI_GP:OAX70677.1;Name=OAX70677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33084.3;locus_tag=A3216_10545;product=type VII secretion protein EsxB;protein_id=OAX70677.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 12907 13194 . + . ID=gene-A3216_10550;Name=A3216_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10550 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 12907 13194 . + 0 ID=cds-OAX70678.1;Parent=gene-A3216_10550;Dbxref=NCBI_GP:OAX70678.1;Name=OAX70678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634408.1;locus_tag=A3216_10550;product=hypothetical protein;protein_id=OAX70678.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 13285 15045 . + . ID=gene-A3216_10555;Name=A3216_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10555 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 13285 15045 . + 0 ID=cds-OAX70679.1;Parent=gene-A3216_10555;Dbxref=NCBI_GP:OAX70679.1;Name=OAX70679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907486.1;locus_tag=A3216_10555;product=secretion protein EspI;protein_id=OAX70679.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 15042 16580 . + . ID=gene-A3216_10560;Name=A3216_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10560 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 15042 16580 . + 0 ID=cds-OAX70680.1;Parent=gene-A3216_10560;Dbxref=NCBI_GP:OAX70680.1;Name=OAX70680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907485.1;locus_tag=A3216_10560;product=type VII secretion integral membrane protein EccD;protein_id=OAX70680.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 17895 18113 . - . ID=gene-A3216_10565;Name=A3216_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10565 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 17895 18113 . - 0 ID=cds-OAX70681.1;Parent=gene-A3216_10565;Dbxref=NCBI_GP:OAX70681.1;Name=OAX70681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10565;product=hypothetical protein;protein_id=OAX70681.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 19561 19902 . - . ID=gene-A3216_10570;Name=A3216_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10570 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 19561 19902 . - 0 ID=cds-OAX70682.1;Parent=gene-A3216_10570;Dbxref=NCBI_GP:OAX70682.1;Name=OAX70682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907484.1;locus_tag=A3216_10570;product=secretion protein EspL;protein_id=OAX70682.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 20567 20872 . - . ID=gene-A3216_10575;Name=A3216_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10575 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 20567 20872 . - 0 ID=cds-OAX70683.1;Parent=gene-A3216_10575;Dbxref=NCBI_GP:OAX70683.1;Name=OAX70683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10575;product=hypothetical protein;protein_id=OAX70683.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 21204 22607 . - . ID=gene-A3216_10580;Name=A3216_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10580 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 21204 22607 . - 0 ID=cds-OAX70684.1;Parent=gene-A3216_10580;Dbxref=NCBI_GP:OAX70684.1;Name=OAX70684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634407.1;locus_tag=A3216_10580;product=type VII secretion protein EccE;protein_id=OAX70684.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 22604 23944 . - . ID=gene-A3216_10585;Name=A3216_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10585 GCA_001648835.1|LVXE01000042.1 Protein Homology CDS 22604 23944 . - 0 ID=cds-OAX70685.1;Parent=gene-A3216_10585;Dbxref=NCBI_GP:OAX70685.1;Name=OAX70685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907482.1;locus_tag=A3216_10585;product=type VII secretion-associated serine protease mycosin;protein_id=OAX70685.1;transl_table=11 GCA_001648835.1|LVXE01000042.1 Genbank gene 24723 25052 . + . ID=gene-A3216_10590;Name=A3216_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10590 GCA_001648835.1|LVXE01000042.1 GeneMarkS+ CDS 24723 25052 . + 0 ID=cds-OAX70686.1;Parent=gene-A3216_10590;Dbxref=NCBI_GP:OAX70686.1;Name=OAX70686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10590;product=hypothetical protein;protein_id=OAX70686.1;transl_table=11 ##sequence-region LVXE01000043.1 1 23900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000043.1 Genbank region 1 23900 . + . ID=LVXE01000043.1:1..23900;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000043.1 Genbank gene 117 401 . + . ID=gene-A3216_10595;Name=A3216_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10595 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 117 401 . + 0 ID=cds-OAX70648.1;Parent=gene-A3216_10595;Dbxref=NCBI_GP:OAX70648.1;Name=OAX70648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10595;product=hypothetical protein;protein_id=OAX70648.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 456 668 . + . ID=gene-A3216_10600;Name=A3216_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10600 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 456 668 . + 0 ID=cds-OAX70649.1;Parent=gene-A3216_10600;Dbxref=NCBI_GP:OAX70649.1;Name=OAX70649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10600;product=hypothetical protein;protein_id=OAX70649.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 843 1247 . + . ID=gene-A3216_10605;Name=A3216_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10605 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 843 1247 . + 0 ID=cds-OAX70667.1;Parent=gene-A3216_10605;Dbxref=NCBI_GP:OAX70667.1;Name=OAX70667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875754.1;locus_tag=A3216_10605;product=HIT family hydrolase;protein_id=OAX70667.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank pseudogene 1256 2661 . - . ID=gene-A3216_10610;Name=A3216_10610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10610;pseudo=true GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 1256 2661 . - 0 ID=cds-A3216_10610;Parent=gene-A3216_10610;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877178.1;locus_tag=A3216_10610;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank pseudogene 2725 3365 . - . ID=gene-A3216_10615;Name=A3216_10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10615;pseudo=true GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 2725 3365 . - 0 ID=cds-A3216_10615;Parent=gene-A3216_10615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019284000.1;locus_tag=A3216_10615;product=DNA-binding response regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 4088 4162 . + . ID=gene-A3216_10620;Name=A3216_10620;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_10620 GCA_001648835.1|LVXE01000043.1 tRNAscan-SE tRNA 4088 4162 . + . ID=rna-A3216_10620;Parent=gene-A3216_10620;anticodon=(pos:4120..4122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_10620;product=tRNA-Thr GCA_001648835.1|LVXE01000043.1 tRNAscan-SE exon 4088 4162 . + . ID=exon-A3216_10620-1;Parent=rna-A3216_10620;anticodon=(pos:4120..4122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_10620;product=tRNA-Thr GCA_001648835.1|LVXE01000043.1 Genbank gene 5064 5330 . - . ID=gene-A3216_10625;Name=A3216_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10625 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 5064 5330 . - 0 ID=cds-OAX70650.1;Parent=gene-A3216_10625;Dbxref=NCBI_GP:OAX70650.1;Name=OAX70650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10625;product=hypothetical protein;protein_id=OAX70650.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 5440 6171 . - . ID=gene-A3216_10630;Name=A3216_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10630 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 5440 6171 . - 0 ID=cds-OAX70651.1;Parent=gene-A3216_10630;Dbxref=NCBI_GP:OAX70651.1;Name=OAX70651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908781.1;locus_tag=A3216_10630;product=trypsin;protein_id=OAX70651.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 7789 8055 . - . ID=gene-A3216_10635;Name=A3216_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10635 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 7789 8055 . - 0 ID=cds-OAX70652.1;Parent=gene-A3216_10635;Dbxref=NCBI_GP:OAX70652.1;Name=OAX70652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10635;product=hypothetical protein;protein_id=OAX70652.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 8234 8428 . + . ID=gene-A3216_10640;Name=A3216_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10640 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 8234 8428 . + 0 ID=cds-OAX70653.1;Parent=gene-A3216_10640;Dbxref=NCBI_GP:OAX70653.1;Name=OAX70653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10640;product=hypothetical protein;protein_id=OAX70653.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 9305 9577 . - . ID=gene-A3216_10645;Name=A3216_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10645 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 9305 9577 . - 0 ID=cds-OAX70654.1;Parent=gene-A3216_10645;Dbxref=NCBI_GP:OAX70654.1;Name=OAX70654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10645;product=hypothetical protein;protein_id=OAX70654.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 9870 10067 . - . ID=gene-A3216_10650;Name=A3216_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10650 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 9870 10067 . - 0 ID=cds-OAX70655.1;Parent=gene-A3216_10650;Dbxref=NCBI_GP:OAX70655.1;Name=OAX70655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10650;product=hypothetical protein;protein_id=OAX70655.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 11086 11376 . - . ID=gene-A3216_10655;Name=A3216_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10655 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 11086 11376 . - 0 ID=cds-OAX70656.1;Parent=gene-A3216_10655;Dbxref=NCBI_GP:OAX70656.1;Name=OAX70656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10655;product=hypothetical protein;protein_id=OAX70656.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 11605 11946 . - . ID=gene-A3216_10660;Name=A3216_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10660 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 11605 11946 . - 0 ID=cds-OAX70657.1;Parent=gene-A3216_10660;Dbxref=NCBI_GP:OAX70657.1;Name=OAX70657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908782.1;locus_tag=A3216_10660;product=hypothetical protein;protein_id=OAX70657.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 12103 12387 . - . ID=gene-A3216_10665;Name=A3216_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10665 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 12103 12387 . - 0 ID=cds-OAX70658.1;Parent=gene-A3216_10665;Dbxref=NCBI_GP:OAX70658.1;Name=OAX70658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10665;product=hypothetical protein;protein_id=OAX70658.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 12412 12615 . - . ID=gene-A3216_10670;Name=A3216_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10670 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 12412 12615 . - 0 ID=cds-OAX70659.1;Parent=gene-A3216_10670;Dbxref=NCBI_GP:OAX70659.1;Name=OAX70659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10670;product=hypothetical protein;protein_id=OAX70659.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 14191 14511 . + . ID=gene-A3216_10675;Name=A3216_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10675 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 14191 14511 . + 0 ID=cds-OAX70660.1;Parent=gene-A3216_10675;Dbxref=NCBI_GP:OAX70660.1;Name=OAX70660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10675;product=hypothetical protein;protein_id=OAX70660.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 14704 16254 . + . ID=gene-A3216_10680;Name=A3216_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10680 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 14704 16254 . + 0 ID=cds-OAX70661.1;Parent=gene-A3216_10680;Dbxref=NCBI_GP:OAX70661.1;Name=OAX70661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908783.1;locus_tag=A3216_10680;product=transcriptional regulator%2C LytR family protein;protein_id=OAX70661.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank pseudogene 16374 17091 . - . ID=gene-A3216_10685;Name=A3216_10685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10685;pseudo=true GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 16374 17091 . - 0 ID=cds-A3216_10685;Parent=gene-A3216_10685;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007166422.1;locus_tag=A3216_10685;product=short-chain dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 17102 17419 . - . ID=gene-A3216_10690;Name=A3216_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10690 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 17102 17419 . - 0 ID=cds-OAX70668.1;Parent=gene-A3216_10690;Dbxref=NCBI_GP:OAX70668.1;Name=OAX70668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908784.1;locus_tag=A3216_10690;product=hypothetical protein;protein_id=OAX70668.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 17522 17761 . - . ID=gene-A3216_10695;Name=A3216_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10695 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 17522 17761 . - 0 ID=cds-OAX70662.1;Parent=gene-A3216_10695;Dbxref=NCBI_GP:OAX70662.1;Name=OAX70662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10695;product=hypothetical protein;protein_id=OAX70662.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 17764 18045 . + . ID=gene-A3216_10700;Name=A3216_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10700 GCA_001648835.1|LVXE01000043.1 GeneMarkS+ CDS 17764 18045 . + 0 ID=cds-OAX70663.1;Parent=gene-A3216_10700;Dbxref=NCBI_GP:OAX70663.1;Name=OAX70663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10700;product=hypothetical protein;protein_id=OAX70663.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank pseudogene 18944 19782 . - . ID=gene-A3216_10705;Name=A3216_10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10705;pseudo=true GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 18944 19782 . - 0 ID=cds-A3216_10705;Parent=gene-A3216_10705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014817720.1;locus_tag=A3216_10705;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 20149 20385 . - . ID=gene-A3216_10710;Name=A3216_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10710 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 20149 20385 . - 0 ID=cds-OAX70664.1;Parent=gene-A3216_10710;Dbxref=NCBI_GP:OAX70664.1;Name=OAX70664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908785.1;locus_tag=A3216_10710;product=hypothetical protein;protein_id=OAX70664.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 20701 20916 . - . ID=gene-A3216_10715;Name=A3216_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10715 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 20701 20916 . - 0 ID=cds-OAX70665.1;Parent=gene-A3216_10715;Dbxref=NCBI_GP:OAX70665.1;Name=OAX70665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908786.1;locus_tag=A3216_10715;product=hypothetical protein;protein_id=OAX70665.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank gene 21645 23141 . + . ID=gene-A3216_10720;Name=A3216_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10720 GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 21645 23141 . + 0 ID=cds-OAX70666.1;Parent=gene-A3216_10720;Dbxref=NCBI_GP:OAX70666.1;Name=OAX70666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50167.1;locus_tag=A3216_10720;product=trehalose-6-phosphate synthase;protein_id=OAX70666.1;transl_table=11 GCA_001648835.1|LVXE01000043.1 Genbank pseudogene 23194 23807 . + . ID=gene-A3216_10725;Name=A3216_10725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10725;pseudo=true GCA_001648835.1|LVXE01000043.1 Protein Homology CDS 23194 23807 . + 0 ID=cds-A3216_10725;Parent=gene-A3216_10725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003900077.1;locus_tag=A3216_10725;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000044.1 1 23884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000044.1 Genbank region 1 23884 . + . ID=LVXE01000044.1:1..23884;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000044.1 Genbank pseudogene 629 1023 . + . ID=gene-A3216_10730;Name=A3216_10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10730;pseudo=true GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 629 1023 . + 0 ID=cds-A3216_10730;Parent=gene-A3216_10730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013829102.1;locus_tag=A3216_10730;product=nitroreductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 1089 2372 . + . ID=gene-A3216_10735;Name=A3216_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10735 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 1089 2372 . + 0 ID=cds-OAX70631.1;Parent=gene-A3216_10735;Dbxref=NCBI_GP:OAX70631.1;Name=OAX70631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908197.1;locus_tag=A3216_10735;product=threonine dehydratase;protein_id=OAX70631.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 3932 4117 . + . ID=gene-A3216_10740;Name=A3216_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10740 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 3932 4117 . + 0 ID=cds-OAX70632.1;Parent=gene-A3216_10740;Dbxref=NCBI_GP:OAX70632.1;Name=OAX70632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908198.1;locus_tag=A3216_10740;product=hypothetical protein;protein_id=OAX70632.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 4322 4558 . - . ID=gene-A3216_10745;Name=A3216_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10745 GCA_001648835.1|LVXE01000044.1 GeneMarkS+ CDS 4322 4558 . - 0 ID=cds-OAX70633.1;Parent=gene-A3216_10745;Dbxref=NCBI_GP:OAX70633.1;Name=OAX70633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10745;product=hypothetical protein;protein_id=OAX70633.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 4952 5245 . - . ID=gene-A3216_10750;Name=A3216_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10750 GCA_001648835.1|LVXE01000044.1 GeneMarkS+ CDS 4952 5245 . - 0 ID=cds-OAX70634.1;Parent=gene-A3216_10750;Dbxref=NCBI_GP:OAX70634.1;Name=OAX70634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10750;product=hypothetical protein;protein_id=OAX70634.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank pseudogene 5279 7473 . - . ID=gene-A3216_10755;Name=A3216_10755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10755;pseudo=true GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 5279 7473 . - 0 ID=cds-A3216_10755;Parent=gene-A3216_10755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014942378.1;locus_tag=A3216_10755;product=glycogen debranching enzyme;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 7517 9691 . - . ID=gene-A3216_10760;Name=A3216_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10760 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 7517 9691 . - 0 ID=cds-OAX70635.1;Parent=gene-A3216_10760;Dbxref=NCBI_GP:OAX70635.1;Name=OAX70635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012394129.1;locus_tag=A3216_10760;product=acetyltransferase;protein_id=OAX70635.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 9848 10486 . - . ID=gene-A3216_10765;Name=A3216_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10765 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 9848 10486 . - 0 ID=cds-OAX70636.1;Parent=gene-A3216_10765;Dbxref=NCBI_GP:OAX70636.1;Name=OAX70636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908200.1;locus_tag=A3216_10765;product=hypothetical protein;protein_id=OAX70636.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 11435 12745 . + . ID=gene-A3216_10770;Name=A3216_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10770 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 11435 12745 . + 0 ID=cds-OAX70637.1;Parent=gene-A3216_10770;Dbxref=NCBI_GP:OAX70637.1;Name=OAX70637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45488.1;locus_tag=A3216_10770;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=OAX70637.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 12752 13909 . + . ID=gene-A3216_10775;Name=A3216_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10775 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 12752 13909 . + 0 ID=cds-OAX70638.1;Parent=gene-A3216_10775;Dbxref=NCBI_GP:OAX70638.1;Name=OAX70638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45487.1;locus_tag=A3216_10775;product=8-amino-7-oxononanoate synthase;protein_id=OAX70638.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 13906 14586 . + . ID=gene-A3216_10780;Name=A3216_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10780 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 13906 14586 . + 0 ID=cds-OAX70645.1;Parent=gene-A3216_10780;Dbxref=NCBI_GP:OAX70645.1;Name=OAX70645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45486.2;locus_tag=A3216_10780;product=dethiobiotin synthase;protein_id=OAX70645.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank pseudogene 14586 15113 . + . ID=gene-A3216_10785;Name=A3216_10785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10785;pseudo=true GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 14586 15113 . + 0 ID=cds-A3216_10785;Parent=gene-A3216_10785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876188.1;locus_tag=A3216_10785;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 15340 16377 . + . ID=gene-A3216_10790;Name=A3216_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10790 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 15340 16377 . + 0 ID=cds-OAX70646.1;Parent=gene-A3216_10790;Dbxref=NCBI_GP:OAX70646.1;Name=OAX70646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908204.1;locus_tag=A3216_10790;product=biotin synthase BioB;protein_id=OAX70646.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 16403 16645 . + . ID=gene-A3216_10795;Name=A3216_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10795 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 16403 16645 . + 0 ID=cds-OAX70639.1;Parent=gene-A3216_10795;Dbxref=NCBI_GP:OAX70639.1;Name=OAX70639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49616.1;locus_tag=A3216_10795;product=hypothetical protein;protein_id=OAX70639.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 16642 17238 . + . ID=gene-A3216_10800;Name=A3216_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10800 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 16642 17238 . + 0 ID=cds-OAX70640.1;Parent=gene-A3216_10800;Dbxref=NCBI_GP:OAX70640.1;Name=OAX70640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49626.1;locus_tag=A3216_10800;product=hypothetical protein;protein_id=OAX70640.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank pseudogene 17289 18577 . - . ID=gene-A3216_10805;Name=A3216_10805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10805;pseudo=true GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 17289 18577 . - 0 ID=cds-A3216_10805;Parent=gene-A3216_10805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787706.1;locus_tag=A3216_10805;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 18785 19504 . - . ID=gene-A3216_10810;Name=A3216_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10810 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 18785 19504 . - 0 ID=cds-OAX70641.1;Parent=gene-A3216_10810;Dbxref=NCBI_GP:OAX70641.1;Name=OAX70641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908207.1;locus_tag=A3216_10810;product=NUDIX hydrolase;protein_id=OAX70641.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 19551 20609 . + . ID=gene-A3216_10815;Name=A3216_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10815 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 19551 20609 . + 0 ID=cds-OAX70647.1;Parent=gene-A3216_10815;Dbxref=NCBI_GP:OAX70647.1;Name=OAX70647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711919.1;locus_tag=A3216_10815;product=quinolinate synthase;protein_id=OAX70647.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 20606 22189 . + . ID=gene-A3216_10820;Name=A3216_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10820 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 20606 22189 . + 0 ID=cds-OAX70642.1;Parent=gene-A3216_10820;Dbxref=NCBI_GP:OAX70642.1;Name=OAX70642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908209.1;locus_tag=A3216_10820;product=L-aspartate oxidase;protein_id=OAX70642.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 22192 23046 . + . ID=gene-A3216_10825;Name=A3216_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10825 GCA_001648835.1|LVXE01000044.1 Protein Homology CDS 22192 23046 . + 0 ID=cds-OAX70643.1;Parent=gene-A3216_10825;Dbxref=NCBI_GP:OAX70643.1;Name=OAX70643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876203.1;locus_tag=A3216_10825;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=OAX70643.1;transl_table=11 GCA_001648835.1|LVXE01000044.1 Genbank gene 23383 23562 . + . ID=gene-A3216_10830;Name=A3216_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10830 GCA_001648835.1|LVXE01000044.1 GeneMarkS+ CDS 23383 23562 . + 0 ID=cds-OAX70644.1;Parent=gene-A3216_10830;Dbxref=NCBI_GP:OAX70644.1;Name=OAX70644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10830;product=hypothetical protein;protein_id=OAX70644.1;transl_table=11 ##sequence-region LVXE01000045.1 1 23057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000045.1 Genbank region 1 23057 . + . ID=LVXE01000045.1:1..23057;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000045.1 Genbank gene 1154 1957 . + . ID=gene-A3216_10835;Name=A3216_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10835 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 1154 1957 . + 0 ID=cds-OAX70613.1;Parent=gene-A3216_10835;Dbxref=NCBI_GP:OAX70613.1;Name=OAX70613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908973.1;locus_tag=A3216_10835;product=ABC transporter permease;protein_id=OAX70613.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 1961 2830 . + . ID=gene-A3216_10840;Name=A3216_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10840 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 1961 2830 . + 0 ID=cds-OAX70614.1;Parent=gene-A3216_10840;Dbxref=NCBI_GP:OAX70614.1;Name=OAX70614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908974.1;locus_tag=A3216_10840;product=ABC transporter permease;protein_id=OAX70614.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 2834 4159 . + . ID=gene-A3216_10845;Name=A3216_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10845 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 2834 4159 . + 0 ID=cds-OAX70615.1;Parent=gene-A3216_10845;Dbxref=NCBI_GP:OAX70615.1;Name=OAX70615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908975.1;locus_tag=A3216_10845;product=MCE-family protein MCE1A;protein_id=OAX70615.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 4156 5196 . + . ID=gene-A3216_10850;Name=A3216_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10850 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 4156 5196 . + 0 ID=cds-OAX70616.1;Parent=gene-A3216_10850;Dbxref=NCBI_GP:OAX70616.1;Name=OAX70616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908976.1;locus_tag=A3216_10850;product=mammalian cell entry protein;protein_id=OAX70616.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 5193 6752 . + . ID=gene-A3216_10855;Name=A3216_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10855 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 5193 6752 . + 0 ID=cds-OAX70617.1;Parent=gene-A3216_10855;Dbxref=NCBI_GP:OAX70617.1;Name=OAX70617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167259.1;locus_tag=A3216_10855;product=mammalian cell entry protein;protein_id=OAX70617.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 6749 8344 . + . ID=gene-A3216_10860;Name=A3216_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10860 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 6749 8344 . + 0 ID=cds-OAX70618.1;Parent=gene-A3216_10860;Dbxref=NCBI_GP:OAX70618.1;Name=OAX70618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015632564.1;locus_tag=A3216_10860;product=mammalian cell entry protein;protein_id=OAX70618.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 8353 9519 . + . ID=gene-A3216_10865;Name=A3216_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10865 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 8353 9519 . + 0 ID=cds-OAX70619.1;Parent=gene-A3216_10865;Dbxref=NCBI_GP:OAX70619.1;Name=OAX70619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003879093.1;locus_tag=A3216_10865;product=mammalian cell entry protein;protein_id=OAX70619.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 9513 11063 . + . ID=gene-A3216_10870;Name=A3216_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10870 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 9513 11063 . + 0 ID=cds-OAX70620.1;Parent=gene-A3216_10870;Dbxref=NCBI_GP:OAX70620.1;Name=OAX70620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019695602.1;locus_tag=A3216_10870;product=mammalian cell entry protein;protein_id=OAX70620.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank pseudogene 11207 11734 . + . ID=gene-A3216_10875;Name=A3216_10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10875;pseudo=true GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 11207 11734 . + 0 ID=cds-A3216_10875;Parent=gene-A3216_10875;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020731472.1;locus_tag=A3216_10875;product=Mce protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 11731 12708 . + . ID=gene-A3216_10880;Name=A3216_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10880 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 11731 12708 . + 0 ID=cds-OAX70621.1;Parent=gene-A3216_10880;Dbxref=NCBI_GP:OAX70621.1;Name=OAX70621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908982.1;locus_tag=A3216_10880;product=hypothetical protein;protein_id=OAX70621.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 12705 13259 . + . ID=gene-A3216_10885;Name=A3216_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10885 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 12705 13259 . + 0 ID=cds-OAX70622.1;Parent=gene-A3216_10885;Dbxref=NCBI_GP:OAX70622.1;Name=OAX70622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955421.1;locus_tag=A3216_10885;product=mammalian cell entry protein;protein_id=OAX70622.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank pseudogene 13379 13903 . + . ID=gene-A3216_10890;Name=A3216_10890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10890;pseudo=true GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 13379 13903 . + 0 ID=cds-A3216_10890;Parent=gene-A3216_10890;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008261950.1;locus_tag=A3216_10890;product=mammalian cell entry protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 15038 16435 . - . ID=gene-A3216_10895;Name=A3216_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10895 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 15038 16435 . - 0 ID=cds-OAX70623.1;Parent=gene-A3216_10895;Dbxref=NCBI_GP:OAX70623.1;Name=OAX70623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908985.1;locus_tag=A3216_10895;product=hypothetical protein;protein_id=OAX70623.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 17482 17679 . + . ID=gene-A3216_10900;Name=A3216_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10900 GCA_001648835.1|LVXE01000045.1 GeneMarkS+ CDS 17482 17679 . + 0 ID=cds-OAX70624.1;Parent=gene-A3216_10900;Dbxref=NCBI_GP:OAX70624.1;Name=OAX70624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10900;product=hypothetical protein;protein_id=OAX70624.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 17924 18763 . + . ID=gene-A3216_10905;Name=A3216_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10905 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 17924 18763 . + 0 ID=cds-OAX70625.1;Parent=gene-A3216_10905;Dbxref=NCBI_GP:OAX70625.1;Name=OAX70625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908986.1;locus_tag=A3216_10905;product=hydrolase;protein_id=OAX70625.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 18824 19573 . + . ID=gene-A3216_10910;Name=A3216_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10910 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 18824 19573 . + 0 ID=cds-OAX70626.1;Parent=gene-A3216_10910;Dbxref=NCBI_GP:OAX70626.1;Name=OAX70626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908987.1;locus_tag=A3216_10910;product=hypothetical protein;protein_id=OAX70626.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 19570 20076 . + . ID=gene-A3216_10915;Name=A3216_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10915 GCA_001648835.1|LVXE01000045.1 Protein Homology CDS 19570 20076 . + 0 ID=cds-OAX70627.1;Parent=gene-A3216_10915;Dbxref=NCBI_GP:OAX70627.1;Name=OAX70627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908988.1;locus_tag=A3216_10915;product=hypothetical protein;protein_id=OAX70627.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 20160 20360 . + . ID=gene-A3216_10920;Name=A3216_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10920 GCA_001648835.1|LVXE01000045.1 GeneMarkS+ CDS 20160 20360 . + 0 ID=cds-OAX70628.1;Parent=gene-A3216_10920;Dbxref=NCBI_GP:OAX70628.1;Name=OAX70628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10920;product=hypothetical protein;protein_id=OAX70628.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 20706 20897 . + . ID=gene-A3216_10925;Name=A3216_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10925 GCA_001648835.1|LVXE01000045.1 GeneMarkS+ CDS 20706 20897 . + 0 ID=cds-OAX70629.1;Parent=gene-A3216_10925;Dbxref=NCBI_GP:OAX70629.1;Name=OAX70629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10925;product=hypothetical protein;protein_id=OAX70629.1;transl_table=11 GCA_001648835.1|LVXE01000045.1 Genbank gene 22424 23044 . - . ID=gene-A3216_10930;Name=A3216_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10930 GCA_001648835.1|LVXE01000045.1 GeneMarkS+ CDS 22424 23044 . - 0 ID=cds-OAX70630.1;Parent=gene-A3216_10930;Dbxref=NCBI_GP:OAX70630.1;Name=OAX70630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10930;product=hypothetical protein;protein_id=OAX70630.1;transl_table=11 ##sequence-region LVXE01000046.1 1 21929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000046.1 Genbank region 1 21929 . + . ID=LVXE01000046.1:1..21929;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000046.1 Genbank gene 486 734 . + . ID=gene-A3216_10935;Name=A3216_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10935 GCA_001648835.1|LVXE01000046.1 GeneMarkS+ CDS 486 734 . + 0 ID=cds-OAX70603.1;Parent=gene-A3216_10935;Dbxref=NCBI_GP:OAX70603.1;Name=OAX70603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10935;product=hypothetical protein;protein_id=OAX70603.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 1858 2869 . - . ID=gene-A3216_10940;Name=A3216_10940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10940;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 1858 2869 . - 0 ID=cds-A3216_10940;Parent=gene-A3216_10940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003906833.1;locus_tag=A3216_10940;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 3045 4107 . - . ID=gene-A3216_10945;Name=A3216_10945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10945;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 3045 4107 . - 0 ID=cds-A3216_10945;Parent=gene-A3216_10945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015290716.1;locus_tag=A3216_10945;product=2-oxoisovalerate dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 4829 5065 . + . ID=gene-A3216_10950;Name=A3216_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10950 GCA_001648835.1|LVXE01000046.1 GeneMarkS+ CDS 4829 5065 . + 0 ID=cds-OAX70604.1;Parent=gene-A3216_10950;Dbxref=NCBI_GP:OAX70604.1;Name=OAX70604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10950;product=hypothetical protein;protein_id=OAX70604.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 5167 5379 . - . ID=gene-A3216_10955;Name=A3216_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10955 GCA_001648835.1|LVXE01000046.1 GeneMarkS+ CDS 5167 5379 . - 0 ID=cds-OAX70605.1;Parent=gene-A3216_10955;Dbxref=NCBI_GP:OAX70605.1;Name=OAX70605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_10955;product=hypothetical protein;protein_id=OAX70605.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 5919 6934 . - . ID=gene-A3216_10960;Name=A3216_10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10960;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 5919 6934 . - 0 ID=cds-A3216_10960;Parent=gene-A3216_10960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014375114.1;locus_tag=A3216_10960;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 7072 8574 . - . ID=gene-A3216_10965;Name=A3216_10965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10965;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 7072 8574 . - 0 ID=cds-A3216_10965;Parent=gene-A3216_10965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019256925.1;locus_tag=A3216_10965;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 8580 10169 . - . ID=gene-A3216_10970;Name=A3216_10970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10970;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 8580 10169 . - 0 ID=cds-A3216_10970;Parent=gene-A3216_10970;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005078692.1;locus_tag=A3216_10970;product=methylcrotonoyl-CoA carboxylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 10166 10820 . - . ID=gene-A3216_10975;Name=A3216_10975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10975;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 10166 10820 . - 0 ID=cds-A3216_10975;Parent=gene-A3216_10975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020786678.1;locus_tag=A3216_10975;product=succinyl-CoA--3-ketoacid-CoA transferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 10870 11550 . - . ID=gene-A3216_10980;Name=A3216_10980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10980;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 10870 11550 . - 0 ID=cds-A3216_10980;Parent=gene-A3216_10980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015293740.1;locus_tag=A3216_10980;product=succinyl-CoA--3-ketoacid-CoA transferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 11662 12941 . - . ID=gene-A3216_10985;Name=A3216_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_10985;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 11662 12941 . - 0 ID=cds-A3216_10985;Parent=gene-A3216_10985;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020476665.1;locus_tag=A3216_10985;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 13888 14667 . + . ID=gene-A3216_10990;Name=A3216_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10990 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 13888 14667 . + 0 ID=cds-OAX70606.1;Parent=gene-A3216_10990;Dbxref=NCBI_GP:OAX70606.1;Name=OAX70606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907725.1;locus_tag=A3216_10990;product=hypothetical protein;protein_id=OAX70606.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 14699 16063 . - . ID=gene-A3216_10995;Name=A3216_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_10995 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 14699 16063 . - 0 ID=cds-OAX70607.1;Parent=gene-A3216_10995;Dbxref=NCBI_GP:OAX70607.1;Name=OAX70607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907724.1;locus_tag=A3216_10995;product=hypothetical protein;protein_id=OAX70607.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 16156 16962 . + . ID=gene-A3216_11000;Name=A3216_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11000 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 16156 16962 . + 0 ID=cds-OAX70608.1;Parent=gene-A3216_11000;Dbxref=NCBI_GP:OAX70608.1;Name=OAX70608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907723.1;locus_tag=A3216_11000;product=short-chain dehydrogenase;protein_id=OAX70608.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank pseudogene 16938 18516 . - . ID=gene-A3216_11005;Name=A3216_11005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11005;pseudo=true GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 16938 18516 . - 0 ID=cds-A3216_11005;Parent=gene-A3216_11005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008255099.1;locus_tag=A3216_11005;product=ATPase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 18642 19289 . + . ID=gene-A3216_11010;Name=A3216_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11010 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 18642 19289 . + 0 ID=cds-OAX70609.1;Parent=gene-A3216_11010;Dbxref=NCBI_GP:OAX70609.1;Name=OAX70609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O07708.1;locus_tag=A3216_11010;product=oligoribonuclease;protein_id=OAX70609.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 19340 19415 . + . ID=gene-A3216_11015;Name=A3216_11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_11015 GCA_001648835.1|LVXE01000046.1 tRNAscan-SE tRNA 19340 19415 . + . ID=rna-A3216_11015;Parent=gene-A3216_11015;anticodon=(pos:19373..19375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11015;product=tRNA-His GCA_001648835.1|LVXE01000046.1 tRNAscan-SE exon 19340 19415 . + . ID=exon-A3216_11015-1;Parent=rna-A3216_11015;anticodon=(pos:19373..19375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11015;product=tRNA-His GCA_001648835.1|LVXE01000046.1 Genbank gene 19440 20654 . - . ID=gene-A3216_11020;Name=A3216_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11020 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 19440 20654 . - 0 ID=cds-OAX70611.1;Parent=gene-A3216_11020;Dbxref=NCBI_GP:OAX70611.1;Name=OAX70611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907721.1;locus_tag=A3216_11020;product=hypothetical protein;protein_id=OAX70611.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 20833 20908 . + . ID=gene-A3216_11025;Name=A3216_11025;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_11025 GCA_001648835.1|LVXE01000046.1 tRNAscan-SE tRNA 20833 20908 . + . ID=rna-A3216_11025;Parent=gene-A3216_11025;anticodon=(pos:20866..20868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11025;product=tRNA-Lys GCA_001648835.1|LVXE01000046.1 tRNAscan-SE exon 20833 20908 . + . ID=exon-A3216_11025-1;Parent=rna-A3216_11025;anticodon=(pos:20866..20868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11025;product=tRNA-Lys GCA_001648835.1|LVXE01000046.1 Genbank gene 20940 21167 . - . ID=gene-A3216_11030;Name=A3216_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11030 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 20940 21167 . - 0 ID=cds-OAX70612.1;Parent=gene-A3216_11030;Dbxref=NCBI_GP:OAX70612.1;Name=OAX70612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007774063.1;locus_tag=A3216_11030;product=hypothetical protein;protein_id=OAX70612.1;transl_table=11 GCA_001648835.1|LVXE01000046.1 Genbank gene 21295 21780 . + . ID=gene-A3216_11035;Name=A3216_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11035 GCA_001648835.1|LVXE01000046.1 Protein Homology CDS 21295 21780 . + 0 ID=cds-OAX70610.1;Parent=gene-A3216_11035;Dbxref=NCBI_GP:OAX70610.1;Name=OAX70610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907719.1;locus_tag=A3216_11035;product=peroxiredoxin;protein_id=OAX70610.1;transl_table=11 ##sequence-region LVXE01000047.1 1 21648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000047.1 Genbank region 1 21648 . + . ID=LVXE01000047.1:1..21648;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000047.1 Genbank gene 211 513 . + . ID=gene-A3216_11040;Name=A3216_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11040 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 211 513 . + 0 ID=cds-OAX70580.1;Parent=gene-A3216_11040;Dbxref=NCBI_GP:OAX70580.1;Name=OAX70580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49945.1;locus_tag=A3216_11040;product=ESAT-6-like protein Y;protein_id=OAX70580.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 565 852 . + . ID=gene-A3216_11045;Name=A3216_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11045 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 565 852 . + 0 ID=cds-OAX70581.1;Parent=gene-A3216_11045;Dbxref=NCBI_GP:OAX70581.1;Name=OAX70581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49946.1;locus_tag=A3216_11045;product=type VII secretion protein EsxI;protein_id=OAX70581.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 1027 1380 . + . ID=gene-A3216_11050;Name=A3216_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11050 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 1027 1380 . + 0 ID=cds-OAX70582.1;Parent=gene-A3216_11050;Dbxref=NCBI_GP:OAX70582.1;Name=OAX70582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908101.1;locus_tag=A3216_11050;product=hypothetical protein;protein_id=OAX70582.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 1471 2424 . - . ID=gene-A3216_11055;Name=A3216_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11055 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 1471 2424 . - 0 ID=cds-OAX70583.1;Parent=gene-A3216_11055;Dbxref=NCBI_GP:OAX70583.1;Name=OAX70583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908102.1;locus_tag=A3216_11055;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=OAX70583.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 2478 3542 . + . ID=gene-A3216_11060;Name=A3216_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11060 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 2478 3542 . + 0 ID=cds-OAX70598.1;Parent=gene-A3216_11060;Dbxref=NCBI_GP:OAX70598.1;Name=OAX70598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773688.1;locus_tag=A3216_11060;product=succinyl-diaminopimelate desuccinylase;protein_id=OAX70598.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 3925 4359 . - . ID=gene-A3216_11065;Name=A3216_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11065 GCA_001648835.1|LVXE01000047.1 GeneMarkS+ CDS 3925 4359 . - 0 ID=cds-OAX70584.1;Parent=gene-A3216_11065;Dbxref=NCBI_GP:OAX70584.1;Name=OAX70584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11065;product=hypothetical protein;protein_id=OAX70584.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 4888 5082 . - . ID=gene-A3216_11070;Name=A3216_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11070 GCA_001648835.1|LVXE01000047.1 GeneMarkS+ CDS 4888 5082 . - 0 ID=cds-OAX70585.1;Parent=gene-A3216_11070;Dbxref=NCBI_GP:OAX70585.1;Name=OAX70585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11070;product=hypothetical protein;protein_id=OAX70585.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 5220 5783 . + . ID=gene-A3216_11075;Name=A3216_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11075 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 5220 5783 . + 0 ID=cds-OAX70586.1;Parent=gene-A3216_11075;Dbxref=NCBI_GP:OAX70586.1;Name=OAX70586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908104.1;locus_tag=A3216_11075;product=Rossman fold protein%2C TIGR00730 family;protein_id=OAX70586.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank pseudogene 5852 7456 . + . ID=gene-A3216_11080;Name=A3216_11080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11080;pseudo=true GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 5852 7456 . + 0 ID=cds-A3216_11080;Parent=gene-A3216_11080;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739202.1;locus_tag=A3216_11080;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 7554 8429 . + . ID=gene-A3216_11085;Name=A3216_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11085 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 7554 8429 . + 0 ID=cds-OAX70587.1;Parent=gene-A3216_11085;Dbxref=NCBI_GP:OAX70587.1;Name=OAX70587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P0C0X2.1;locus_tag=A3216_11085;product=dihydropteroate synthase;protein_id=OAX70587.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 8426 9406 . + . ID=gene-A3216_11090;Name=A3216_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11090 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 8426 9406 . + 0 ID=cds-OAX70588.1;Parent=gene-A3216_11090;Dbxref=NCBI_GP:OAX70588.1;Name=OAX70588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908106.1;locus_tag=A3216_11090;product=glucosyl-3-phosphoglycerate synthase;protein_id=OAX70588.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 9422 9766 . + . ID=gene-A3216_11095;Name=A3216_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11095 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 9422 9766 . + 0 ID=cds-OAX70589.1;Parent=gene-A3216_11095;Dbxref=NCBI_GP:OAX70589.1;Name=OAX70589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908107.1;locus_tag=A3216_11095;product=cell division protein DivIVA;protein_id=OAX70589.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 9763 10341 . + . ID=gene-A3216_11100;Name=A3216_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11100 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 9763 10341 . + 0 ID=cds-OAX70590.1;Parent=gene-A3216_11100;Dbxref=NCBI_GP:OAX70590.1;Name=OAX70590.1;Note=constitutive%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908108.1;locus_tag=A3216_11100;product=3-methyladenine DNA glycosylase;protein_id=OAX70590.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 10615 10782 . + . ID=gene-A3216_11105;Name=A3216_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11105 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 10615 10782 . + 0 ID=cds-OAX70599.1;Parent=gene-A3216_11105;Dbxref=NCBI_GP:OAX70599.1;Name=OAX70599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003406247.1;locus_tag=A3216_11105;product=DUF3117 domain-containing protein;protein_id=OAX70599.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank pseudogene 10772 11947 . - . ID=gene-A3216_11110;Name=A3216_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11110;pseudo=true GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 10772 11947 . - 0 ID=cds-A3216_11110;Parent=gene-A3216_11110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773706.1;locus_tag=A3216_11110;product=glycosyl transferase family 1;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 12127 13341 . + . ID=gene-A3216_11115;Name=A3216_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11115 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 12127 13341 . + 0 ID=cds-OAX70600.1;Parent=gene-A3216_11115;Dbxref=NCBI_GP:OAX70600.1;Name=OAX70600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1TDM8.1;locus_tag=A3216_11115;product=glucose-1-phosphate adenylyltransferase;protein_id=OAX70600.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 13415 14068 . + . ID=gene-A3216_11120;Name=A3216_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11120 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 13415 14068 . + 0 ID=cds-OAX70591.1;Parent=gene-A3216_11120;Dbxref=NCBI_GP:OAX70591.1;Name=OAX70591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908111.1;locus_tag=A3216_11120;product=TetR family transcriptional regulator;protein_id=OAX70591.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 14250 14486 . + . ID=gene-A3216_11125;Name=A3216_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11125 GCA_001648835.1|LVXE01000047.1 GeneMarkS+ CDS 14250 14486 . + 0 ID=cds-OAX70592.1;Parent=gene-A3216_11125;Dbxref=NCBI_GP:OAX70592.1;Name=OAX70592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11125;product=hypothetical protein;protein_id=OAX70592.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 14643 14972 . - . ID=gene-A3216_11130;Name=A3216_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11130 GCA_001648835.1|LVXE01000047.1 GeneMarkS+ CDS 14643 14972 . - 0 ID=cds-OAX70593.1;Parent=gene-A3216_11130;Dbxref=NCBI_GP:OAX70593.1;Name=OAX70593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11130;product=hypothetical protein;protein_id=OAX70593.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 15257 15550 . - . ID=gene-A3216_11135;Name=A3216_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11135 GCA_001648835.1|LVXE01000047.1 GeneMarkS+ CDS 15257 15550 . - 0 ID=cds-OAX70594.1;Parent=gene-A3216_11135;Dbxref=NCBI_GP:OAX70594.1;Name=OAX70594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11135;product=hypothetical protein;protein_id=OAX70594.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank pseudogene 15596 16452 . - . ID=gene-A3216_11140;Name=A3216_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11140;pseudo=true GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 15596 16452 . - 0 ID=cds-A3216_11140;Parent=gene-A3216_11140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009956310.1;locus_tag=A3216_11140;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank pseudogene 16476 17120 . - . ID=gene-A3216_11145;Name=A3216_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11145;pseudo=true GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 16476 17120 . - 0 ID=cds-A3216_11145;Parent=gene-A3216_11145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254623.1;locus_tag=A3216_11145;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 17164 17838 . - . ID=gene-A3216_11150;Name=A3216_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11150 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 17164 17838 . - 0 ID=cds-OAX70595.1;Parent=gene-A3216_11150;Dbxref=NCBI_GP:OAX70595.1;Name=OAX70595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCA7.1;locus_tag=A3216_11150;product=methyltransferase;protein_id=OAX70595.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 18136 18909 . + . ID=gene-A3216_11155;Name=A3216_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11155 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 18136 18909 . + 0 ID=cds-OAX70601.1;Parent=gene-A3216_11155;Dbxref=NCBI_GP:OAX70601.1;Name=OAX70601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169154.1;locus_tag=A3216_11155;product=RNA polymerase sigma factor SigE;protein_id=OAX70601.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 19056 19475 . + . ID=gene-A3216_11160;Name=A3216_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11160 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 19056 19475 . + 0 ID=cds-OAX70596.1;Parent=gene-A3216_11160;Dbxref=NCBI_GP:OAX70596.1;Name=OAX70596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908114.1;locus_tag=A3216_11160;product=RNA polymerase subunit sigma-70;protein_id=OAX70596.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 19637 21151 . + . ID=gene-A3216_11165;Name=A3216_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11165 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 19637 21151 . + 0 ID=cds-OAX70602.1;Parent=gene-A3216_11165;Dbxref=NCBI_GP:OAX70602.1;Name=OAX70602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773721.1;locus_tag=A3216_11165;product=serine protease;protein_id=OAX70602.1;transl_table=11 GCA_001648835.1|LVXE01000047.1 Genbank gene 21151 21513 . + . ID=gene-A3216_11170;Name=A3216_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11170 GCA_001648835.1|LVXE01000047.1 Protein Homology CDS 21151 21513 . + 0 ID=cds-OAX70597.1;Parent=gene-A3216_11170;Dbxref=NCBI_GP:OAX70597.1;Name=OAX70597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908116.1;locus_tag=A3216_11170;product=twin arginine-targeting protein translocase TatB;protein_id=OAX70597.1;transl_table=11 ##sequence-region LVXE01000048.1 1 21588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000048.1 Genbank region 1 21588 . + . ID=LVXE01000048.1:1..21588;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000048.1 Genbank pseudogene 1 332 . + . ID=gene-A3216_11175;Name=A3216_11175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11175;pseudo=true GCA_001648835.1|LVXE01000048.1 GeneMarkS+ CDS 1 332 . + 2 ID=cds-A3216_11175;Parent=gene-A3216_11175;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11175;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 1505 1735 . - . ID=gene-A3216_11180;Name=A3216_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11180 GCA_001648835.1|LVXE01000048.1 GeneMarkS+ CDS 1505 1735 . - 0 ID=cds-OAX70569.1;Parent=gene-A3216_11180;Dbxref=NCBI_GP:OAX70569.1;Name=OAX70569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11180;product=hypothetical protein;protein_id=OAX70569.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 2512 2715 . - . ID=gene-A3216_11185;Name=A3216_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11185 GCA_001648835.1|LVXE01000048.1 GeneMarkS+ CDS 2512 2715 . - 0 ID=cds-OAX70570.1;Parent=gene-A3216_11185;Dbxref=NCBI_GP:OAX70570.1;Name=OAX70570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11185;product=hypothetical protein;protein_id=OAX70570.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 2933 4765 . - . ID=gene-A3216_11190;Name=A3216_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11190 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 2933 4765 . - 0 ID=cds-OAX70571.1;Parent=gene-A3216_11190;Dbxref=NCBI_GP:OAX70571.1;Name=OAX70571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908390.1;locus_tag=A3216_11190;product=type VII secretion AAA-ATPase EccA;protein_id=OAX70571.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 4762 5967 . - . ID=gene-A3216_11195;Name=A3216_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11195 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 4762 5967 . - 0 ID=cds-OAX70572.1;Parent=gene-A3216_11195;Dbxref=NCBI_GP:OAX70572.1;Name=OAX70572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908391.1;locus_tag=A3216_11195;product=type VII secretion protein EccE;protein_id=OAX70572.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 5988 7751 . - . ID=gene-A3216_11200;Name=A3216_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11200 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 5988 7751 . - 0 ID=cds-OAX70573.1;Parent=gene-A3216_11200;Dbxref=NCBI_GP:OAX70573.1;Name=OAX70573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876477.1;locus_tag=A3216_11200;product=peptidase S8;protein_id=OAX70573.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 7723 9234 . - . ID=gene-A3216_11205;Name=A3216_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11205 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 7723 9234 . - 0 ID=cds-OAX70574.1;Parent=gene-A3216_11205;Dbxref=NCBI_GP:OAX70574.1;Name=OAX70574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725134.1;locus_tag=A3216_11205;product=type VII secretion integral membrane protein EccD;protein_id=OAX70574.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 9498 10400 . - . ID=gene-A3216_11210;Name=A3216_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11210 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 9498 10400 . - 0 ID=cds-OAX70575.1;Parent=gene-A3216_11210;Dbxref=NCBI_GP:OAX70575.1;Name=OAX70575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011740937.1;locus_tag=A3216_11210;product=hypothetical protein;protein_id=OAX70575.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 12072 12500 . + . ID=gene-A3216_11215;Name=A3216_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11215 GCA_001648835.1|LVXE01000048.1 GeneMarkS+ CDS 12072 12500 . + 0 ID=cds-OAX70576.1;Parent=gene-A3216_11215;Dbxref=NCBI_GP:OAX70576.1;Name=OAX70576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11215;product=hypothetical protein;protein_id=OAX70576.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 12871 13113 . + . ID=gene-A3216_11220;Name=A3216_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11220 GCA_001648835.1|LVXE01000048.1 GeneMarkS+ CDS 12871 13113 . + 0 ID=cds-OAX70577.1;Parent=gene-A3216_11220;Dbxref=NCBI_GP:OAX70577.1;Name=OAX70577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11220;product=hypothetical protein;protein_id=OAX70577.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 13418 17575 . - . ID=gene-A3216_11225;Name=A3216_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11225 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 13418 17575 . - 0 ID=cds-OAX70578.1;Parent=gene-A3216_11225;Dbxref=NCBI_GP:OAX70578.1;Name=OAX70578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020787503.1;locus_tag=A3216_11225;product=type VII secretion protein EccC;protein_id=OAX70578.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank gene 17572 19092 . - . ID=gene-A3216_11230;Name=A3216_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11230 GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 17572 19092 . - 0 ID=cds-OAX70579.1;Parent=gene-A3216_11230;Dbxref=NCBI_GP:OAX70579.1;Name=OAX70579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876467.1;locus_tag=A3216_11230;product=type VII secretion protein EccB;protein_id=OAX70579.1;transl_table=11 GCA_001648835.1|LVXE01000048.1 Genbank pseudogene 19515 21493 . + . ID=gene-A3216_11235;Name=A3216_11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11235;pseudo=true GCA_001648835.1|LVXE01000048.1 Protein Homology CDS 19515 21493 . + 0 ID=cds-A3216_11235;Parent=gene-A3216_11235;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355464.1;locus_tag=A3216_11235;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000049.1 1 21150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000049.1 Genbank region 1 21150 . + . ID=LVXE01000049.1:1..21150;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000049.1 Genbank gene 645 992 . + . ID=gene-A3216_11240;Name=A3216_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11240 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 645 992 . + 0 ID=cds-OAX70556.1;Parent=gene-A3216_11240;Dbxref=NCBI_GP:OAX70556.1;Name=OAX70556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11240;product=hypothetical protein;protein_id=OAX70556.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank pseudogene 941 2167 . + . ID=gene-A3216_11245;Name=A3216_11245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11245;pseudo=true GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 941 2167 . + 0 ID=cds-A3216_11245;Parent=gene-A3216_11245;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003900536.1;locus_tag=A3216_11245;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 3062 3292 . + . ID=gene-A3216_11250;Name=A3216_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11250 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 3062 3292 . + 0 ID=cds-OAX70557.1;Parent=gene-A3216_11250;Dbxref=NCBI_GP:OAX70557.1;Name=OAX70557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11250;product=hypothetical protein;protein_id=OAX70557.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 4439 4738 . + . ID=gene-A3216_11255;Name=A3216_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11255 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 4439 4738 . + 0 ID=cds-OAX70558.1;Parent=gene-A3216_11255;Dbxref=NCBI_GP:OAX70558.1;Name=OAX70558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11255;product=hypothetical protein;protein_id=OAX70558.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank pseudogene 5288 5554 . + . ID=gene-A3216_11260;Name=A3216_11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11260;pseudo=true GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 5288 5554 . + 0 ID=cds-A3216_11260;Parent=gene-A3216_11260;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003929505.1;locus_tag=A3216_11260;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 5991 6173 . + . ID=gene-A3216_11265;Name=A3216_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11265 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 5991 6173 . + 0 ID=cds-OAX70559.1;Parent=gene-A3216_11265;Dbxref=NCBI_GP:OAX70559.1;Name=OAX70559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11265;product=hypothetical protein;protein_id=OAX70559.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 6646 7872 . - . ID=gene-A3216_11270;Name=A3216_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11270 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 6646 7872 . - 0 ID=cds-OAX70560.1;Parent=gene-A3216_11270;Dbxref=NCBI_GP:OAX70560.1;Name=OAX70560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008253939.1;locus_tag=A3216_11270;product=divalent metal cation transporter;protein_id=OAX70560.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank pseudogene 8008 9110 . - . ID=gene-A3216_11275;Name=A3216_11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11275;pseudo=true GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 8008 9110 . - 0 ID=cds-A3216_11275;Parent=gene-A3216_11275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396130.1;locus_tag=A3216_11275;product=diacylglycerol kinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 9152 9337 . - . ID=gene-A3216_11280;Name=A3216_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11280 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 9152 9337 . - 0 ID=cds-OAX70561.1;Parent=gene-A3216_11280;Dbxref=NCBI_GP:OAX70561.1;Name=OAX70561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11280;product=hypothetical protein;protein_id=OAX70561.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 9646 9912 . - . ID=gene-A3216_11285;Name=A3216_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11285 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 9646 9912 . - 0 ID=cds-OAX70562.1;Parent=gene-A3216_11285;Dbxref=NCBI_GP:OAX70562.1;Name=OAX70562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11285;product=hypothetical protein;protein_id=OAX70562.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 10254 11363 . + . ID=gene-A3216_11290;Name=A3216_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11290 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 10254 11363 . + 0 ID=cds-OAX70563.1;Parent=gene-A3216_11290;Dbxref=NCBI_GP:OAX70563.1;Name=OAX70563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBE5.1;locus_tag=A3216_11290;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=OAX70563.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 11406 12365 . + . ID=gene-A3216_11295;Name=A3216_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11295 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 11406 12365 . + 0 ID=cds-OAX70564.1;Parent=gene-A3216_11295;Dbxref=NCBI_GP:OAX70564.1;Name=OAX70564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50098.1;locus_tag=A3216_11295;product=phosphate ABC transporter permease subunit PstC;protein_id=OAX70564.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 12383 13297 . + . ID=gene-A3216_11300;Name=A3216_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11300 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 12383 13297 . + 0 ID=cds-OAX70565.1;Parent=gene-A3216_11300;Dbxref=NCBI_GP:OAX70565.1;Name=OAX70565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q50097.1;locus_tag=A3216_11300;product=phosphate ABC transporter%2C permease protein PstA;protein_id=OAX70565.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank pseudogene 13491 14244 . - . ID=gene-A3216_11305;Name=A3216_11305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11305;pseudo=true GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 13491 14244 . - 0 ID=cds-A3216_11305;Parent=gene-A3216_11305;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013470917.1;locus_tag=A3216_11305;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 14534 14719 . - . ID=gene-A3216_11310;Name=A3216_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11310 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 14534 14719 . - 0 ID=cds-OAX70566.1;Parent=gene-A3216_11310;Dbxref=NCBI_GP:OAX70566.1;Name=OAX70566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908712.1;locus_tag=A3216_11310;product=hypothetical protein;protein_id=OAX70566.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 16691 16936 . + . ID=gene-A3216_11315;Name=A3216_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11315 GCA_001648835.1|LVXE01000049.1 GeneMarkS+ CDS 16691 16936 . + 0 ID=cds-OAX70567.1;Parent=gene-A3216_11315;Dbxref=NCBI_GP:OAX70567.1;Name=OAX70567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11315;product=hypothetical protein;protein_id=OAX70567.1;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank pseudogene 17137 19090 . + . ID=gene-A3216_11320;Name=A3216_11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11320;pseudo=true GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 17137 19090 . + 0 ID=cds-A3216_11320;Parent=gene-A3216_11320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015292548.1;locus_tag=A3216_11320;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000049.1 Genbank gene 19580 20884 . + . ID=gene-A3216_11325;Name=A3216_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11325 GCA_001648835.1|LVXE01000049.1 Protein Homology CDS 19580 20884 . + 0 ID=cds-OAX70568.1;Parent=gene-A3216_11325;Dbxref=NCBI_GP:OAX70568.1;Name=OAX70568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908711.1;locus_tag=A3216_11325;product=cytochrome;protein_id=OAX70568.1;transl_table=11 ##sequence-region LVXE01000005.1 1 87851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000005.1 Genbank region 1 87851 . + . ID=LVXE01000005.1:1..87851;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000005.1 Genbank gene 211 513 . + . ID=gene-A3216_03170;Name=A3216_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03170 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 211 513 . + 0 ID=cds-OAX71810.1;Parent=gene-A3216_03170;Dbxref=NCBI_GP:OAX71810.1;Name=OAX71810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49945.1;locus_tag=A3216_03170;product=ESAT-6-like protein Y;protein_id=OAX71810.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 565 852 . + . ID=gene-A3216_03175;Name=A3216_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03175 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 565 852 . + 0 ID=cds-OAX71811.1;Parent=gene-A3216_03175;Dbxref=NCBI_GP:OAX71811.1;Name=OAX71811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49946.1;locus_tag=A3216_03175;product=type VII secretion protein EsxI;protein_id=OAX71811.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 2414 2665 . - . ID=gene-A3216_03180;Name=A3216_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03180 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 2414 2665 . - 0 ID=cds-OAX71812.1;Parent=gene-A3216_03180;Dbxref=NCBI_GP:OAX71812.1;Name=OAX71812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03180;product=hypothetical protein;protein_id=OAX71812.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 2833 4067 . - . ID=gene-A3216_03185;Name=A3216_03185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03185;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 2833 4067 . - 0 ID=cds-A3216_03185;Parent=gene-A3216_03185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015306037.1;locus_tag=A3216_03185;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 4017 5195 . - . ID=gene-A3216_03190;Name=A3216_03190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03190;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 4017 5195 . - 0 ID=cds-A3216_03190;Parent=gene-A3216_03190;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020726124.1;locus_tag=A3216_03190;product=mesaconyl-CoA isomerase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 6505 6684 . - . ID=gene-A3216_03195;Name=A3216_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03195 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 6505 6684 . - 0 ID=cds-OAX71813.1;Parent=gene-A3216_03195;Dbxref=NCBI_GP:OAX71813.1;Name=OAX71813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03195;product=hypothetical protein;protein_id=OAX71813.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 6994 7076 . - . ID=gene-A3216_03200;Name=A3216_03200;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_03200 GCA_001648835.1|LVXE01000005.1 tRNAscan-SE tRNA 6994 7076 . - . ID=rna-A3216_03200;Parent=gene-A3216_03200;anticodon=(pos:complement(7041..7043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_03200;product=tRNA-Leu GCA_001648835.1|LVXE01000005.1 tRNAscan-SE exon 6994 7076 . - . ID=exon-A3216_03200-1;Parent=rna-A3216_03200;anticodon=(pos:complement(7041..7043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_03200;product=tRNA-Leu GCA_001648835.1|LVXE01000005.1 Genbank gene 7931 8311 . + . ID=gene-A3216_03205;Name=A3216_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03205 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 7931 8311 . + 0 ID=cds-OAX71814.1;Parent=gene-A3216_03205;Dbxref=NCBI_GP:OAX71814.1;Name=OAX71814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54134.1;locus_tag=A3216_03205;product=hypothetical protein;protein_id=OAX71814.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 8308 8667 . + . ID=gene-A3216_03210;Name=A3216_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03210 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 8308 8667 . + 0 ID=cds-OAX71815.1;Parent=gene-A3216_03210;Dbxref=NCBI_GP:OAX71815.1;Name=OAX71815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54133.1;locus_tag=A3216_03210;product=hypothetical protein;protein_id=OAX71815.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 8708 9370 . - . ID=gene-A3216_03215;Name=A3216_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03215 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 8708 9370 . - 0 ID=cds-OAX71816.1;Parent=gene-A3216_03215;Dbxref=NCBI_GP:OAX71816.1;Name=OAX71816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908181.1;locus_tag=A3216_03215;product=non-canonical purine NTP pyrophosphatase;protein_id=OAX71816.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 9405 10184 . - . ID=gene-A3216_03220;Name=A3216_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03220 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 9405 10184 . - 0 ID=cds-OAX71817.1;Parent=gene-A3216_03220;Dbxref=NCBI_GP:OAX71817.1;Name=OAX71817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773930.1;locus_tag=A3216_03220;product=ribonuclease PH;protein_id=OAX71817.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 10274 11056 . - . ID=gene-A3216_03225;Name=A3216_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03225 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 10274 11056 . - 0 ID=cds-OAX71818.1;Parent=gene-A3216_03225;Dbxref=NCBI_GP:OAX71818.1;Name=OAX71818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908179.1;locus_tag=A3216_03225;product=hypothetical protein;protein_id=OAX71818.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 11129 11947 . - . ID=gene-A3216_03230;Name=A3216_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03230 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 11129 11947 . - 0 ID=cds-OAX71819.1;Parent=gene-A3216_03230;Dbxref=NCBI_GP:OAX71819.1;Name=OAX71819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46705.1;locus_tag=A3216_03230;product=glutamate racemase;protein_id=OAX71819.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 11944 12660 . - . ID=gene-A3216_03235;Name=A3216_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03235 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 11944 12660 . - 0 ID=cds-OAX71861.1;Parent=gene-A3216_03235;Dbxref=NCBI_GP:OAX71861.1;Name=OAX71861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908177.1;locus_tag=A3216_03235;product=rhomboid family intramembrane serine protease;protein_id=OAX71861.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 12752 13753 . - . ID=gene-A3216_03240;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=pseudogene;locus_tag=A3216_03240;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 12752 13753 . - 0 ID=cds-A3216_03240;Parent=gene-A3216_03240;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide%3B frameshifted%3B internal stop;gbkey=CDS;gene=cysM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016887241.1;locus_tag=A3216_03240;product=cysteine synthase B;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 14513 15580 . - . ID=gene-A3216_03245;Name=A3216_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03245 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 14513 15580 . - 0 ID=cds-OAX71862.1;Parent=gene-A3216_03245;Dbxref=NCBI_GP:OAX71862.1;Name=OAX71862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788121.1;locus_tag=A3216_03245;product=hypothetical protein;protein_id=OAX71862.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 15601 16188 . - . ID=gene-A3216_03250;Name=A3216_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03250 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 15601 16188 . - 0 ID=cds-OAX71820.1;Parent=gene-A3216_03250;Dbxref=NCBI_GP:OAX71820.1;Name=OAX71820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908175.1;locus_tag=A3216_03250;product=hypothetical protein;protein_id=OAX71820.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 16214 16531 . - . ID=gene-A3216_03255;Name=A3216_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03255 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 16214 16531 . - 0 ID=cds-OAX71863.1;Parent=gene-A3216_03255;Dbxref=NCBI_GP:OAX71863.1;Name=OAX71863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773922.1;locus_tag=A3216_03255;product=ATP-dependent Clp protease adapter ClpS;protein_id=OAX71863.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 16936 17208 . + . ID=gene-A3216_03260;Name=A3216_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03260 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 16936 17208 . + 0 ID=cds-OAX71821.1;Parent=gene-A3216_03260;Dbxref=NCBI_GP:OAX71821.1;Name=OAX71821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03260;product=hypothetical protein;protein_id=OAX71821.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 17342 17545 . + . ID=gene-A3216_03265;Name=A3216_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03265 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 17342 17545 . + 0 ID=cds-OAX71822.1;Parent=gene-A3216_03265;Dbxref=NCBI_GP:OAX71822.1;Name=OAX71822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03265;product=hypothetical protein;protein_id=OAX71822.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 17550 17765 . + . ID=gene-A3216_03270;Name=A3216_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03270 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 17550 17765 . + 0 ID=cds-OAX71823.1;Parent=gene-A3216_03270;Dbxref=NCBI_GP:OAX71823.1;Name=OAX71823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03270;product=hypothetical protein;protein_id=OAX71823.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 18855 19247 . - . ID=gene-A3216_03275;Name=A3216_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03275 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 18855 19247 . - 0 ID=cds-OAX71824.1;Parent=gene-A3216_03275;Dbxref=NCBI_GP:OAX71824.1;Name=OAX71824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03275;product=hypothetical protein;protein_id=OAX71824.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 19312 19614 . - . ID=gene-A3216_03280;Name=A3216_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03280 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 19312 19614 . - 0 ID=cds-OAX71825.1;Parent=gene-A3216_03280;Dbxref=NCBI_GP:OAX71825.1;Name=OAX71825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03280;product=hypothetical protein;protein_id=OAX71825.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 20027 20500 . - . ID=gene-A3216_03285;Name=A3216_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03285 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 20027 20500 . - 0 ID=cds-OAX71826.1;Parent=gene-A3216_03285;Dbxref=NCBI_GP:OAX71826.1;Name=OAX71826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03285;product=hypothetical protein;protein_id=OAX71826.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 20552 20782 . - . ID=gene-A3216_03290;Name=A3216_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03290 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 20552 20782 . - 0 ID=cds-OAX71827.1;Parent=gene-A3216_03290;Dbxref=NCBI_GP:OAX71827.1;Name=OAX71827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03290;product=hypothetical protein;protein_id=OAX71827.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 21678 23684 . + . ID=gene-A3216_03295;Name=A3216_03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03295;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 21678 23684 . + 0 ID=cds-A3216_03295;Parent=gene-A3216_03295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015308436.1;locus_tag=A3216_03295;product=alpha-1%2C4-glucan--maltose-1-phosphate maltosyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 23734 25917 . + . ID=gene-A3216_03300;Name=A3216_03300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03300;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 23734 25917 . + 0 ID=cds-A3216_03300;Parent=gene-A3216_03300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254871.1;locus_tag=A3216_03300;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 25967 26905 . - . ID=gene-A3216_03305;Name=A3216_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03305 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 25967 26905 . - 0 ID=cds-OAX71864.1;Parent=gene-A3216_03305;Dbxref=NCBI_GP:OAX71864.1;Name=OAX71864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711090.1;locus_tag=A3216_03305;product=co-chaperone YbbN;protein_id=OAX71864.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 27059 28240 . - . ID=gene-A3216_03310;Name=A3216_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03310 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 27059 28240 . - 0 ID=cds-OAX71828.1;Parent=gene-A3216_03310;Dbxref=NCBI_GP:OAX71828.1;Name=OAX71828.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46707.1;locus_tag=A3216_03310;product=acetyl-CoA acetyltransferase;protein_id=OAX71828.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 28332 28799 . + . ID=gene-A3216_03315;Name=A3216_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03315 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 28332 28799 . + 0 ID=cds-OAX71829.1;Parent=gene-A3216_03315;Dbxref=NCBI_GP:OAX71829.1;Name=OAX71829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254861.1;locus_tag=A3216_03315;product=methylmalonyl-CoA epimerase;protein_id=OAX71829.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 29131 29802 . - . ID=gene-A3216_03320;Name=A3216_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03320 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 29131 29802 . - 0 ID=cds-OAX71865.1;Parent=gene-A3216_03320;Dbxref=NCBI_GP:OAX71865.1;Name=OAX71865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788132.1;locus_tag=A3216_03320;product=endonuclease;protein_id=OAX71865.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 29889 31483 . + . ID=gene-A3216_03325;Name=A3216_03325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03325;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 29889 31483 . + 0 ID=cds-A3216_03325;Parent=gene-A3216_03325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975725.1;locus_tag=A3216_03325;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 31480 32652 . - . ID=gene-A3216_03330;Name=A3216_03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03330;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 31480 32652 . - 0 ID=cds-A3216_03330;Parent=gene-A3216_03330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771735.1;locus_tag=A3216_03330;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 33803 34015 . + . ID=gene-A3216_03335;Name=A3216_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03335 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 33803 34015 . + 0 ID=cds-OAX71830.1;Parent=gene-A3216_03335;Dbxref=NCBI_GP:OAX71830.1;Name=OAX71830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03335;product=hypothetical protein;protein_id=OAX71830.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 34295 34792 . + . ID=gene-A3216_03340;Name=A3216_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03340 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 34295 34792 . + 0 ID=cds-OAX71831.1;Parent=gene-A3216_03340;Dbxref=NCBI_GP:OAX71831.1;Name=OAX71831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P52982.1;locus_tag=A3216_03340;product=cysteine methyltransferase;protein_id=OAX71831.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 34852 34964 . - . ID=gene-A3216_03345;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=A3216_03345 GCA_001648835.1|LVXE01000005.1 cmsearch rRNA 34852 34964 . - . ID=rna-A3216_03345;Parent=gene-A3216_03345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_03345;product=5S ribosomal RNA GCA_001648835.1|LVXE01000005.1 cmsearch exon 34852 34964 . - . ID=exon-A3216_03345-1;Parent=rna-A3216_03345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=A3216_03345;product=5S ribosomal RNA GCA_001648835.1|LVXE01000005.1 Genbank gene 35047 38177 . - . ID=gene-A3216_03350;Name=A3216_03350;gbkey=Gene;gene_biotype=rRNA;locus_tag=A3216_03350 GCA_001648835.1|LVXE01000005.1 Genbank rRNA 35047 38177 . - . ID=rna-A3216_03350;Parent=gene-A3216_03350;gbkey=rRNA;locus_tag=A3216_03350;product=23S ribosomal RNA GCA_001648835.1|LVXE01000005.1 Genbank exon 35047 38177 . - . ID=exon-A3216_03350-1;Parent=rna-A3216_03350;gbkey=rRNA;locus_tag=A3216_03350;product=23S ribosomal RNA GCA_001648835.1|LVXE01000005.1 Genbank gene 38454 40010 . - . ID=gene-A3216_03355;Name=A3216_03355;gbkey=Gene;gene_biotype=rRNA;locus_tag=A3216_03355 GCA_001648835.1|LVXE01000005.1 Genbank rRNA 38454 40010 . - . ID=rna-A3216_03355;Parent=gene-A3216_03355;gbkey=rRNA;locus_tag=A3216_03355;product=16S ribosomal RNA GCA_001648835.1|LVXE01000005.1 Genbank exon 38454 40010 . - . ID=exon-A3216_03355-1;Parent=rna-A3216_03355;gbkey=rRNA;locus_tag=A3216_03355;product=16S ribosomal RNA GCA_001648835.1|LVXE01000005.1 Genbank gene 40316 41572 . - . ID=gene-A3216_03360;Name=A3216_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03360 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 40316 41572 . - 0 ID=cds-OAX71832.1;Parent=gene-A3216_03360;Dbxref=NCBI_GP:OAX71832.1;Name=OAX71832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45821.1;locus_tag=A3216_03360;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=OAX71832.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 41663 42238 . + . ID=gene-A3216_03365;Name=A3216_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03365 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 41663 42238 . + 0 ID=cds-OAX71833.1;Parent=gene-A3216_03365;Dbxref=NCBI_GP:OAX71833.1;Name=OAX71833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53523.1;locus_tag=A3216_03365;product=ATP:cob(I)alamin adenosyltransferase;protein_id=OAX71833.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 42451 42606 . + . ID=gene-A3216_03370;Name=A3216_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03370 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 42451 42606 . + 0 ID=cds-OAX71834.1;Parent=gene-A3216_03370;Dbxref=NCBI_GP:OAX71834.1;Name=OAX71834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908166.1;locus_tag=A3216_03370;product=hypothetical protein;protein_id=OAX71834.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 42745 43188 . - . ID=gene-A3216_03375;Name=A3216_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03375 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 42745 43188 . - 0 ID=cds-OAX71835.1;Parent=gene-A3216_03375;Dbxref=NCBI_GP:OAX71835.1;Name=OAX71835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908165.1;locus_tag=A3216_03375;product=hypothetical protein;protein_id=OAX71835.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 43195 43560 . - . ID=gene-A3216_03380;Name=A3216_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03380 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 43195 43560 . - 0 ID=cds-OAX71836.1;Parent=gene-A3216_03380;Dbxref=NCBI_GP:OAX71836.1;Name=OAX71836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254826.1;locus_tag=A3216_03380;product=F0F1 ATP synthase subunit epsilon;protein_id=OAX71836.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 43593 45050 . - . ID=gene-A3216_03385;Name=A3216_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03385 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 43593 45050 . - 0 ID=cds-OAX71837.1;Parent=gene-A3216_03385;Dbxref=NCBI_GP:OAX71837.1;Name=OAX71837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45823.1;locus_tag=A3216_03385;product=F0F1 ATP synthase subunit beta;protein_id=OAX71837.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 45077 45973 . - . ID=gene-A3216_03390;Name=A3216_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03390 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 45077 45973 . - 0 ID=cds-OAX71838.1;Parent=gene-A3216_03390;Dbxref=NCBI_GP:OAX71838.1;Name=OAX71838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007169272.1;locus_tag=A3216_03390;product=F0F1 ATP synthase subunit gamma;protein_id=OAX71838.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 45991 47667 . - . ID=gene-A3216_03395;Name=A3216_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03395 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 45991 47667 . - 0 ID=cds-OAX71839.1;Parent=gene-A3216_03395;Dbxref=NCBI_GP:OAX71839.1;Name=OAX71839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45825.1;locus_tag=A3216_03395;product=F0F1 ATP synthase subunit alpha;protein_id=OAX71839.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 47729 49069 . - . ID=gene-A3216_03400;Name=A3216_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03400 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 47729 49069 . - 0 ID=cds-OAX71840.1;Parent=gene-A3216_03400;Dbxref=NCBI_GP:OAX71840.1;Name=OAX71840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955320.1;locus_tag=A3216_03400;product=F0F1 ATP synthase subunit B/delta;protein_id=OAX71840.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 49075 49587 . - . ID=gene-A3216_03405;Name=A3216_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03405 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 49075 49587 . - 0 ID=cds-OAX71841.1;Parent=gene-A3216_03405;Dbxref=NCBI_GP:OAX71841.1;Name=OAX71841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45827.1;locus_tag=A3216_03405;product=F0F1 ATP synthase subunit B;protein_id=OAX71841.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 49609 49854 . - . ID=gene-A3216_03410;Name=A3216_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03410 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 49609 49854 . - 0 ID=cds-OAX71842.1;Parent=gene-A3216_03410;Dbxref=NCBI_GP:OAX71842.1;Name=OAX71842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HQK7.1;locus_tag=A3216_03410;product=ATP synthase F0 subunit C;protein_id=OAX71842.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 49950 50705 . - . ID=gene-A3216_03415;Name=A3216_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03415 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 49950 50705 . - 0 ID=cds-OAX71843.1;Parent=gene-A3216_03415;Dbxref=NCBI_GP:OAX71843.1;Name=OAX71843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254800.1;locus_tag=A3216_03415;product=F0F1 ATP synthase subunit A;protein_id=OAX71843.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 50702 51163 . - . ID=gene-A3216_03420;Name=A3216_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03420 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 50702 51163 . - 0 ID=cds-OAX71844.1;Parent=gene-A3216_03420;Dbxref=NCBI_GP:OAX71844.1;Name=OAX71844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P53431.1;locus_tag=A3216_03420;product=hypothetical protein;protein_id=OAX71844.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 51426 52604 . - . ID=gene-A3216_03425;Name=A3216_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03425 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 51426 52604 . - 0 ID=cds-OAX71866.1;Parent=gene-A3216_03425;Dbxref=NCBI_GP:OAX71866.1;Name=OAX71866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379593.1;locus_tag=A3216_03425;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=OAX71866.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 52656 53309 . - . ID=gene-A3216_03430;Name=A3216_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03430 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 52656 53309 . - 0 ID=cds-OAX71845.1;Parent=gene-A3216_03430;Dbxref=NCBI_GP:OAX71845.1;Name=OAX71845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254793.1;locus_tag=A3216_03430;product=threonylcarbamoyl-AMP synthase;protein_id=OAX71845.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 53358 54224 . - . ID=gene-A3216_03435;Name=A3216_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03435 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 53358 54224 . - 0 ID=cds-OAX71846.1;Parent=gene-A3216_03435;Dbxref=NCBI_GP:OAX71846.1;Name=OAX71846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45832.2;locus_tag=A3216_03435;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=OAX71846.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 54221 55306 . - . ID=gene-A3216_03440;Name=A3216_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03440 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 54221 55306 . - 0 ID=cds-OAX71847.1;Parent=gene-A3216_03440;Dbxref=NCBI_GP:OAX71847.1;Name=OAX71847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45833.2;locus_tag=A3216_03440;product=peptide chain release factor 1;protein_id=OAX71847.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 55397 55651 . - . ID=gene-A3216_03445;Name=A3216_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03445 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 55397 55651 . - 0 ID=cds-OAX71848.1;Parent=gene-A3216_03445;Dbxref=NCBI_GP:OAX71848.1;Name=OAX71848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45834.1;locus_tag=A3216_03445;product=50S ribosomal protein L31;protein_id=OAX71848.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 55962 57794 . - . ID=gene-A3216_03450;Name=A3216_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03450 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 55962 57794 . - 0 ID=cds-OAX71849.1;Parent=gene-A3216_03450;Dbxref=NCBI_GP:OAX71849.1;Name=OAX71849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012634428.1;locus_tag=A3216_03450;product=transcription termination factor Rho;protein_id=OAX71849.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 58064 58999 . - . ID=gene-A3216_03455;Name=A3216_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03455 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 58064 58999 . - 0 ID=cds-OAX71867.1;Parent=gene-A3216_03455;Dbxref=NCBI_GP:OAX71867.1;Name=OAX71867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873234.1;locus_tag=A3216_03455;product=homoserine kinase;protein_id=OAX71867.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 59079 60161 . - . ID=gene-A3216_03460;Name=A3216_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03460 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 59079 60161 . - 0 ID=cds-OAX71850.1;Parent=gene-A3216_03460;Dbxref=NCBI_GP:OAX71850.1;Name=OAX71850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45837.1;locus_tag=A3216_03460;product=threonine synthase;protein_id=OAX71850.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 60158 61483 . - . ID=gene-A3216_03465;Name=A3216_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03465 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 60158 61483 . - 0 ID=cds-OAX71851.1;Parent=gene-A3216_03465;Dbxref=NCBI_GP:OAX71851.1;Name=OAX71851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46806.1;locus_tag=A3216_03465;product=homoserine dehydrogenase;protein_id=OAX71851.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 61487 62905 . - . ID=gene-A3216_03470;Name=A3216_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03470 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 61487 62905 . - 0 ID=cds-OAX71852.1;Parent=gene-A3216_03470;Dbxref=NCBI_GP:OAX71852.1;Name=OAX71852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873237.1;locus_tag=A3216_03470;product=diaminopimelate decarboxylase;protein_id=OAX71852.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 62902 64554 . - . ID=gene-A3216_03475;Name=A3216_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03475 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 62902 64554 . - 0 ID=cds-OAX71868.1;Parent=gene-A3216_03475;Dbxref=NCBI_GP:OAX71868.1;Name=OAX71868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003931011.1;locus_tag=A3216_03475;product=arginine--tRNA ligase;protein_id=OAX71868.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 64750 64825 . + . ID=gene-A3216_03480;Name=A3216_03480;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_03480 GCA_001648835.1|LVXE01000005.1 tRNAscan-SE tRNA 64750 64825 . + . ID=rna-A3216_03480;Parent=gene-A3216_03480;anticodon=(pos:64783..64785);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_03480;product=tRNA-Arg GCA_001648835.1|LVXE01000005.1 tRNAscan-SE exon 64750 64825 . + . ID=exon-A3216_03480-1;Parent=rna-A3216_03480;anticodon=(pos:64783..64785);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_03480;product=tRNA-Arg GCA_001648835.1|LVXE01000005.1 Genbank gene 67047 67241 . + . ID=gene-A3216_03485;Name=A3216_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03485 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 67047 67241 . + 0 ID=cds-OAX71853.1;Parent=gene-A3216_03485;Dbxref=NCBI_GP:OAX71853.1;Name=OAX71853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03485;product=hypothetical protein;protein_id=OAX71853.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 71272 71475 . + . ID=gene-A3216_03490;Name=A3216_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03490 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 71272 71475 . + 0 ID=cds-OAX71854.1;Parent=gene-A3216_03490;Dbxref=NCBI_GP:OAX71854.1;Name=OAX71854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03490;product=hypothetical protein;protein_id=OAX71854.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 74622 74801 . - . ID=gene-A3216_03495;Name=A3216_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03495 GCA_001648835.1|LVXE01000005.1 GeneMarkS+ CDS 74622 74801 . - 0 ID=cds-OAX71855.1;Parent=gene-A3216_03495;Dbxref=NCBI_GP:OAX71855.1;Name=OAX71855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03495;product=hypothetical protein;protein_id=OAX71855.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 76035 77012 . + . ID=gene-A3216_03500;Name=A3216_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03500 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 76035 77012 . + 0 ID=cds-OAX71856.1;Parent=gene-A3216_03500;Dbxref=NCBI_GP:OAX71856.1;Name=OAX71856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018599038.1;locus_tag=A3216_03500;product=peptide ABC transporter permease;protein_id=OAX71856.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 77009 77908 . + . ID=gene-A3216_03505;Name=A3216_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03505 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 77009 77908 . + 0 ID=cds-OAX71857.1;Parent=gene-A3216_03505;Dbxref=NCBI_GP:OAX71857.1;Name=OAX71857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908143.1;locus_tag=A3216_03505;product=peptide ABC transporter permease;protein_id=OAX71857.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 77905 79734 . + . ID=gene-A3216_03510;Name=A3216_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03510 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 77905 79734 . + 0 ID=cds-OAX71858.1;Parent=gene-A3216_03510;Dbxref=NCBI_GP:OAX71858.1;Name=OAX71858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908142.1;locus_tag=A3216_03510;product=peptide ABC transporter ATP-binding protein;protein_id=OAX71858.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 79737 81404 . + . ID=gene-A3216_03515;Name=A3216_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03515 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 79737 81404 . + 0 ID=cds-OAX71869.1;Parent=gene-A3216_03515;Dbxref=NCBI_GP:OAX71869.1;Name=OAX71869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941491.1;locus_tag=A3216_03515;product=hypothetical protein;protein_id=OAX71869.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 81391 82503 . - . ID=gene-A3216_03520;Name=A3216_03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03520;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 81391 82503 . - 0 ID=cds-A3216_03520;Parent=gene-A3216_03520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955263.1;locus_tag=A3216_03520;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 82592 85213 . - . ID=gene-A3216_03525;Name=A3216_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03525 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 82592 85213 . - 0 ID=cds-OAX71859.1;Parent=gene-A3216_03525;Dbxref=NCBI_GP:OAX71859.1;Name=OAX71859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908140.1;locus_tag=A3216_03525;product=hypothetical protein;protein_id=OAX71859.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank gene 85210 86361 . - . ID=gene-A3216_03530;Name=A3216_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03530 GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 85210 86361 . - 0 ID=cds-OAX71860.1;Parent=gene-A3216_03530;Dbxref=NCBI_GP:OAX71860.1;Name=OAX71860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011724136.1;locus_tag=A3216_03530;product=DNA repair exonuclease;protein_id=OAX71860.1;transl_table=11 GCA_001648835.1|LVXE01000005.1 Genbank pseudogene 86585 87729 . + . ID=gene-A3216_03535;Name=A3216_03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03535;pseudo=true GCA_001648835.1|LVXE01000005.1 Protein Homology CDS 86585 87729 . + 0 ID=cds-A3216_03535;Parent=gene-A3216_03535;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014712246.1;locus_tag=A3216_03535;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000050.1 1 32480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000050.1 Genbank region 1 32480 . + . ID=LVXE01000050.1:1..32480;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000050.1 Genbank gene 2375 2680 . - . ID=gene-A3216_11330;Name=A3216_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11330 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 2375 2680 . - 0 ID=cds-OAX70523.1;Parent=gene-A3216_11330;Dbxref=NCBI_GP:OAX70523.1;Name=OAX70523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11330;product=hypothetical protein;protein_id=OAX70523.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 2892 3071 . - . ID=gene-A3216_11335;Name=A3216_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11335 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 2892 3071 . - 0 ID=cds-OAX70524.1;Parent=gene-A3216_11335;Dbxref=NCBI_GP:OAX70524.1;Name=OAX70524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11335;product=hypothetical protein;protein_id=OAX70524.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 3152 3724 . - . ID=gene-A3216_11340;Name=A3216_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11340 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 3152 3724 . - 0 ID=cds-OAX70525.1;Parent=gene-A3216_11340;Dbxref=NCBI_GP:OAX70525.1;Name=OAX70525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11340;product=hypothetical protein;protein_id=OAX70525.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 3684 4694 . - . ID=gene-A3216_11345;Name=A3216_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11345 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 3684 4694 . - 0 ID=cds-OAX70526.1;Parent=gene-A3216_11345;Dbxref=NCBI_GP:OAX70526.1;Name=OAX70526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003910117.1;locus_tag=A3216_11345;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);protein_id=OAX70526.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 4782 5537 . + . ID=gene-A3216_11350;Name=A3216_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11350 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 4782 5537 . + 0 ID=cds-OAX70527.1;Parent=gene-A3216_11350;Dbxref=NCBI_GP:OAX70527.1;Name=OAX70527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907640.1;locus_tag=A3216_11350;product=MBL fold metallo-hydrolase;protein_id=OAX70527.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 5526 5897 . - . ID=gene-A3216_11355;Name=A3216_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11355 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 5526 5897 . - 0 ID=cds-OAX70528.1;Parent=gene-A3216_11355;Dbxref=NCBI_GP:OAX70528.1;Name=OAX70528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907641.1;locus_tag=A3216_11355;product=hypothetical protein;protein_id=OAX70528.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 8234 9454 . - . ID=gene-A3216_11360;Name=A3216_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11360 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 8234 9454 . - 0 ID=cds-OAX70553.1;Parent=gene-A3216_11360;Dbxref=NCBI_GP:OAX70553.1;Name=OAX70553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768544.1;locus_tag=A3216_11360;product=O-succinylhomoserine sulfhydrylase;protein_id=OAX70553.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 9511 9954 . - . ID=gene-A3216_11365;Name=A3216_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11365 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 9511 9954 . - 0 ID=cds-OAX70529.1;Parent=gene-A3216_11365;Dbxref=NCBI_GP:OAX70529.1;Name=OAX70529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907643.1;locus_tag=A3216_11365;product=sulfurtransferase;protein_id=OAX70529.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 11045 11305 . - . ID=gene-A3216_11370;Name=A3216_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11370 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 11045 11305 . - 0 ID=cds-OAX70530.1;Parent=gene-A3216_11370;Dbxref=NCBI_GP:OAX70530.1;Name=OAX70530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11370;product=hypothetical protein;protein_id=OAX70530.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 11686 11994 . + . ID=gene-A3216_11375;Name=A3216_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11375 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 11686 11994 . + 0 ID=cds-OAX70531.1;Parent=gene-A3216_11375;Dbxref=NCBI_GP:OAX70531.1;Name=OAX70531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11375;product=hypothetical protein;protein_id=OAX70531.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 11974 12654 . - . ID=gene-A3216_11380;Name=A3216_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11380 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 11974 12654 . - 0 ID=cds-OAX70532.1;Parent=gene-A3216_11380;Dbxref=NCBI_GP:OAX70532.1;Name=OAX70532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003401827.1;locus_tag=A3216_11380;product=thioesterase;protein_id=OAX70532.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 12627 13925 . - . ID=gene-A3216_11385;Name=A3216_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11385 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 12627 13925 . - 0 ID=cds-OAX70533.1;Parent=gene-A3216_11385;Dbxref=NCBI_GP:OAX70533.1;Name=OAX70533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69595.1;locus_tag=A3216_11385;product=adenylosuccinate synthase;protein_id=OAX70533.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 14109 14798 . + . ID=gene-A3216_11390;Name=A3216_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11390 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 14109 14798 . + 0 ID=cds-OAX70534.1;Parent=gene-A3216_11390;Dbxref=NCBI_GP:OAX70534.1;Name=OAX70534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907646.1;locus_tag=A3216_11390;product=peptidase M50;protein_id=OAX70534.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank pseudogene 14805 15589 . + . ID=gene-A3216_11395;Name=A3216_11395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11395;pseudo=true GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 14805 15589 . + 0 ID=cds-A3216_11395;Parent=gene-A3216_11395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008261482.1;locus_tag=A3216_11395;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 15593 16399 . + . ID=gene-A3216_11400;Name=A3216_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11400 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 15593 16399 . + 0 ID=cds-OAX70535.1;Parent=gene-A3216_11400;Dbxref=NCBI_GP:OAX70535.1;Name=OAX70535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907647.1;locus_tag=A3216_11400;product=metal transporter;protein_id=OAX70535.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 16537 16950 . - . ID=gene-A3216_11405;Name=A3216_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11405 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 16537 16950 . - 0 ID=cds-OAX70554.1;Parent=gene-A3216_11405;Dbxref=NCBI_GP:OAX70554.1;Name=OAX70554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003888051.1;locus_tag=A3216_11405;product=hypothetical protein;protein_id=OAX70554.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 17062 17940 . + . ID=gene-A3216_11410;Name=A3216_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11410 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 17062 17940 . + 0 ID=cds-OAX70536.1;Parent=gene-A3216_11410;Dbxref=NCBI_GP:OAX70536.1;Name=OAX70536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907649.1;locus_tag=A3216_11410;product=hypothetical protein;protein_id=OAX70536.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 17956 18993 . - . ID=gene-A3216_11415;Name=A3216_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11415 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 17956 18993 . - 0 ID=cds-OAX70537.1;Parent=gene-A3216_11415;Dbxref=NCBI_GP:OAX70537.1;Name=OAX70537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69600.1;locus_tag=A3216_11415;product=class II fructose-bisphosphate aldolase;protein_id=OAX70537.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 19126 19794 . + . ID=gene-A3216_11420;Name=A3216_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11420 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 19126 19794 . + 0 ID=cds-OAX70538.1;Parent=gene-A3216_11420;Dbxref=NCBI_GP:OAX70538.1;Name=OAX70538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69601.1;locus_tag=A3216_11420;product=hypothetical protein;protein_id=OAX70538.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 20043 20264 . + . ID=gene-A3216_11425;Name=A3216_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11425 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 20043 20264 . + 0 ID=cds-OAX70539.1;Parent=gene-A3216_11425;Dbxref=NCBI_GP:OAX70539.1;Name=OAX70539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11425;product=hypothetical protein;protein_id=OAX70539.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank pseudogene 20461 21610 . + . ID=gene-A3216_11430;Name=A3216_11430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11430;pseudo=true GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 20461 21610 . + 0 ID=cds-A3216_11430;Parent=gene-A3216_11430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008260744.1;locus_tag=A3216_11430;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 22154 22342 . + . ID=gene-A3216_11435;Name=A3216_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11435 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 22154 22342 . + 0 ID=cds-OAX70540.1;Parent=gene-A3216_11435;Dbxref=NCBI_GP:OAX70540.1;Name=OAX70540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11435;product=hypothetical protein;protein_id=OAX70540.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 22808 23038 . + . ID=gene-A3216_11440;Name=A3216_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11440 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 22808 23038 . + 0 ID=cds-OAX70541.1;Parent=gene-A3216_11440;Dbxref=NCBI_GP:OAX70541.1;Name=OAX70541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11440;product=hypothetical protein;protein_id=OAX70541.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 23442 23678 . + . ID=gene-A3216_11445;Name=A3216_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11445 GCA_001648835.1|LVXE01000050.1 GeneMarkS+ CDS 23442 23678 . + 0 ID=cds-OAX70542.1;Parent=gene-A3216_11445;Dbxref=NCBI_GP:OAX70542.1;Name=OAX70542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11445;product=hypothetical protein;protein_id=OAX70542.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 25179 25664 . - . ID=gene-A3216_11450;Name=A3216_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11450 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 25179 25664 . - 0 ID=cds-OAX70543.1;Parent=gene-A3216_11450;Dbxref=NCBI_GP:OAX70543.1;Name=OAX70543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908650.1;locus_tag=A3216_11450;product=hypothetical protein;protein_id=OAX70543.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 25709 26317 . - . ID=gene-A3216_11455;Name=A3216_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11455 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 25709 26317 . - 0 ID=cds-OAX70544.1;Parent=gene-A3216_11455;Dbxref=NCBI_GP:OAX70544.1;Name=OAX70544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908649.1;locus_tag=A3216_11455;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=OAX70544.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 26319 27314 . - . ID=gene-A3216_11460;Name=A3216_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11460 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 26319 27314 . - 0 ID=cds-OAX70545.1;Parent=gene-A3216_11460;Dbxref=NCBI_GP:OAX70545.1;Name=OAX70545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773488.1;locus_tag=A3216_11460;product=dTDP-glucose 4%2C6-dehydratase;protein_id=OAX70545.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 27835 28056 . + . ID=gene-A3216_11465;Name=A3216_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11465 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 27835 28056 . + 0 ID=cds-OAX70546.1;Parent=gene-A3216_11465;Dbxref=NCBI_GP:OAX70546.1;Name=OAX70546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003418601.1;locus_tag=A3216_11465;product=translation initiation factor IF-1;protein_id=OAX70546.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 28096 28209 . + . ID=gene-A3216_11470;Name=A3216_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11470 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 28096 28209 . + 0 ID=cds-OAX70547.1;Parent=gene-A3216_11470;Dbxref=NCBI_GP:OAX70547.1;Name=OAX70547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005987264.1;locus_tag=A3216_11470;product=50S ribosomal protein L36;protein_id=OAX70547.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 28386 28760 . + . ID=gene-A3216_11475;Name=A3216_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11475 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 28386 28760 . + 0 ID=cds-OAX70548.1;Parent=gene-A3216_11475;Dbxref=NCBI_GP:OAX70548.1;Name=OAX70548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003905085.1;locus_tag=A3216_11475;product=30S ribosomal protein S13;protein_id=OAX70548.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 28764 29180 . + . ID=gene-A3216_11480;Name=A3216_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11480 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 28764 29180 . + 0 ID=cds-OAX70549.1;Parent=gene-A3216_11480;Dbxref=NCBI_GP:OAX70549.1;Name=OAX70549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5Z1L1.1;locus_tag=A3216_11480;product=30S ribosomal protein S11;protein_id=OAX70549.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 29214 29819 . + . ID=gene-A3216_11485;Name=A3216_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11485 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 29214 29819 . + 0 ID=cds-OAX70550.1;Parent=gene-A3216_11485;Dbxref=NCBI_GP:OAX70550.1;Name=OAX70550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007773473.1;locus_tag=A3216_11485;product=30S ribosomal protein S4;protein_id=OAX70550.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 29904 30947 . + . ID=gene-A3216_11490;Name=A3216_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11490 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 29904 30947 . + 0 ID=cds-OAX70551.1;Parent=gene-A3216_11490;Dbxref=NCBI_GP:OAX70551.1;Name=OAX70551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020101463.1;locus_tag=A3216_11490;product=DNA-directed RNA polymerase subunit alpha;protein_id=OAX70551.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 30971 31483 . + . ID=gene-A3216_11495;Name=A3216_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11495 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 30971 31483 . + 0 ID=cds-OAX70552.1;Parent=gene-A3216_11495;Dbxref=NCBI_GP:OAX70552.1;Name=OAX70552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X797.1;locus_tag=A3216_11495;product=50S ribosomal protein L17;protein_id=OAX70552.1;transl_table=11 GCA_001648835.1|LVXE01000050.1 Genbank gene 31509 32324 . + . ID=gene-A3216_11500;Name=A3216_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11500 GCA_001648835.1|LVXE01000050.1 Protein Homology CDS 31509 32324 . + 0 ID=cds-OAX70555.1;Parent=gene-A3216_11500;Dbxref=NCBI_GP:OAX70555.1;Name=OAX70555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003904329.1;locus_tag=A3216_11500;product=tRNA pseudouridine(38%2C39%2C40) synthase TruA;protein_id=OAX70555.1;transl_table=11 ##sequence-region LVXE01000051.1 1 20431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000051.1 Genbank region 1 20431 . + . ID=LVXE01000051.1:1..20431;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000051.1 Genbank pseudogene 104 1088 . - . ID=gene-A3216_11505;Name=A3216_11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11505;pseudo=true GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 104 1088 . - 0 ID=cds-A3216_11505;Parent=gene-A3216_11505;Note=ATP-dependent carboxylate-amine ligase%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014584646.1;locus_tag=A3216_11505;product=carboxylate--amine ligase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 1154 1876 . - . ID=gene-A3216_11510;Name=A3216_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11510 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 1154 1876 . - 0 ID=cds-OAX70502.1;Parent=gene-A3216_11510;Dbxref=NCBI_GP:OAX70502.1;Name=OAX70502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBI6.1;locus_tag=A3216_11510;product=superoxide dismutase;protein_id=OAX70502.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 1941 2378 . - . ID=gene-A3216_11515;Name=A3216_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11515 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 1941 2378 . - 0 ID=cds-OAX70503.1;Parent=gene-A3216_11515;Dbxref=NCBI_GP:OAX70503.1;Name=OAX70503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167559.1;locus_tag=A3216_11515;product=hypothetical protein;protein_id=OAX70503.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 2475 2783 . - . ID=gene-A3216_11520;Name=A3216_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11520 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 2475 2783 . - 0 ID=cds-OAX70504.1;Parent=gene-A3216_11520;Dbxref=NCBI_GP:OAX70504.1;Name=OAX70504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908621.1;locus_tag=A3216_11520;product=hypothetical protein;protein_id=OAX70504.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 2814 2951 . - . ID=gene-A3216_11525;Name=A3216_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11525 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 2814 2951 . - 0 ID=cds-OAX70505.1;Parent=gene-A3216_11525;Dbxref=NCBI_GP:OAX70505.1;Name=OAX70505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908622.1;locus_tag=A3216_11525;product=hypothetical protein;protein_id=OAX70505.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 2998 3591 . + . ID=gene-A3216_11530;Name=A3216_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11530 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 2998 3591 . + 0 ID=cds-OAX70506.1;Parent=gene-A3216_11530;Dbxref=NCBI_GP:OAX70506.1;Name=OAX70506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBI2.1;locus_tag=A3216_11530;product=peptide deformylase;protein_id=OAX70506.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 3599 3910 . + . ID=gene-A3216_11535;Name=A3216_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11535 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 3599 3910 . + 0 ID=cds-OAX70507.1;Parent=gene-A3216_11535;Dbxref=NCBI_GP:OAX70507.1;Name=OAX70507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11535;product=hypothetical protein;protein_id=OAX70507.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 4056 4427 . - . ID=gene-A3216_11540;Name=A3216_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11540 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 4056 4427 . - 0 ID=cds-OAX70508.1;Parent=gene-A3216_11540;Dbxref=NCBI_GP:OAX70508.1;Name=OAX70508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11540;product=hypothetical protein;protein_id=OAX70508.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 5174 5617 . + . ID=gene-A3216_11545;Name=A3216_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11545 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 5174 5617 . + 0 ID=cds-OAX70520.1;Parent=gene-A3216_11545;Dbxref=NCBI_GP:OAX70520.1;Name=OAX70520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015354409.1;locus_tag=A3216_11545;product=hypothetical protein;protein_id=OAX70520.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 5691 6023 . + . ID=gene-A3216_11550;Name=A3216_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11550 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 5691 6023 . + 0 ID=cds-OAX70509.1;Parent=gene-A3216_11550;Dbxref=NCBI_GP:OAX70509.1;Name=OAX70509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11550;product=hypothetical protein;protein_id=OAX70509.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 6924 7163 . + . ID=gene-A3216_11555;Name=A3216_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11555 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 6924 7163 . + 0 ID=cds-OAX70510.1;Parent=gene-A3216_11555;Dbxref=NCBI_GP:OAX70510.1;Name=OAX70510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11555;product=hypothetical protein;protein_id=OAX70510.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 9188 9472 . - . ID=gene-A3216_11560;Name=A3216_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11560 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 9188 9472 . - 0 ID=cds-OAX70511.1;Parent=gene-A3216_11560;Dbxref=NCBI_GP:OAX70511.1;Name=OAX70511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11560;product=hypothetical protein;protein_id=OAX70511.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 10114 10362 . + . ID=gene-A3216_11565;Name=A3216_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11565 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 10114 10362 . + 0 ID=cds-OAX70512.1;Parent=gene-A3216_11565;Dbxref=NCBI_GP:OAX70512.1;Name=OAX70512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11565;product=hypothetical protein;protein_id=OAX70512.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 10456 10719 . - . ID=gene-A3216_11570;Name=A3216_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11570 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 10456 10719 . - 0 ID=cds-OAX70513.1;Parent=gene-A3216_11570;Dbxref=NCBI_GP:OAX70513.1;Name=OAX70513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11570;product=hypothetical protein;protein_id=OAX70513.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 11229 11477 . - . ID=gene-A3216_11575;Name=A3216_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11575 GCA_001648835.1|LVXE01000051.1 GeneMarkS+ CDS 11229 11477 . - 0 ID=cds-OAX70514.1;Parent=gene-A3216_11575;Dbxref=NCBI_GP:OAX70514.1;Name=OAX70514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11575;product=hypothetical protein;protein_id=OAX70514.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 12582 13652 . - . ID=gene-A3216_11580;Name=A3216_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11580 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 12582 13652 . - 0 ID=cds-OAX70515.1;Parent=gene-A3216_11580;Dbxref=NCBI_GP:OAX70515.1;Name=OAX70515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908625.1;locus_tag=A3216_11580;product=redox-regulated ATPase YchF;protein_id=OAX70515.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 13703 14935 . + . ID=gene-A3216_11585;Name=A3216_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11585 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 13703 14935 . + 0 ID=cds-OAX70516.1;Parent=gene-A3216_11585;Dbxref=NCBI_GP:OAX70516.1;Name=OAX70516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908626.1;locus_tag=A3216_11585;product=hypothetical protein;protein_id=OAX70516.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 14946 15944 . - . ID=gene-A3216_11590;Name=A3216_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11590 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 14946 15944 . - 0 ID=cds-OAX70517.1;Parent=gene-A3216_11590;Dbxref=NCBI_GP:OAX70517.1;Name=OAX70517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X781.2;locus_tag=A3216_11590;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=OAX70517.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 16122 16739 . + . ID=gene-A3216_11595;Name=A3216_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11595 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 16122 16739 . + 0 ID=cds-OAX70518.1;Parent=gene-A3216_11595;Dbxref=NCBI_GP:OAX70518.1;Name=OAX70518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908628.1;locus_tag=A3216_11595;product=hypothetical protein;protein_id=OAX70518.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 16736 18022 . + . ID=gene-A3216_11600;Name=A3216_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11600 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 16736 18022 . + 0 ID=cds-OAX70519.1;Parent=gene-A3216_11600;Dbxref=NCBI_GP:OAX70519.1;Name=OAX70519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X783.1;locus_tag=A3216_11600;product=exodeoxyribonuclease VII large subunit;protein_id=OAX70519.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 18012 18275 . + . ID=gene-A3216_11605;Name=A3216_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11605 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 18012 18275 . + 0 ID=cds-OAX70521.1;Parent=gene-A3216_11605;Dbxref=NCBI_GP:OAX70521.1;Name=OAX70521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908630.1;locus_tag=A3216_11605;product=exodeoxyribonuclease VII small subunit;protein_id=OAX70521.1;transl_table=11 GCA_001648835.1|LVXE01000051.1 Genbank gene 18326 19456 . + . ID=gene-A3216_11610;Name=A3216_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11610 GCA_001648835.1|LVXE01000051.1 Protein Homology CDS 18326 19456 . + 0 ID=cds-OAX70522.1;Parent=gene-A3216_11610;Dbxref=NCBI_GP:OAX70522.1;Name=OAX70522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908631.1;locus_tag=A3216_11610;product=steroid delta-isomerase;protein_id=OAX70522.1;transl_table=11 ##sequence-region LVXE01000052.1 1 23339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000052.1 Genbank region 1 23339 . + . ID=LVXE01000052.1:1..23339;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000052.1 Genbank gene 628 2499 . - . ID=gene-A3216_11615;Name=A3216_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11615 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 628 2499 . - 0 ID=cds-OAX70488.1;Parent=gene-A3216_11615;Dbxref=NCBI_GP:OAX70488.1;Name=OAX70488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908520.1;locus_tag=A3216_11615;product=hypothetical protein;protein_id=OAX70488.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank pseudogene 2517 3362 . - . ID=gene-A3216_11620;Name=A3216_11620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11620;pseudo=true GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 2517 3362 . - 0 ID=cds-A3216_11620;Parent=gene-A3216_11620;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908521.1;locus_tag=A3216_11620;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 3338 5218 . - . ID=gene-A3216_11625;Name=A3216_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11625 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 3338 5218 . - 0 ID=cds-OAX70489.1;Parent=gene-A3216_11625;Dbxref=NCBI_GP:OAX70489.1;Name=OAX70489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725275.1;locus_tag=A3216_11625;product=hypothetical protein;protein_id=OAX70489.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 5236 7401 . - . ID=gene-A3216_11630;Name=A3216_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11630 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 5236 7401 . - 0 ID=cds-OAX70490.1;Parent=gene-A3216_11630;Dbxref=NCBI_GP:OAX70490.1;Name=OAX70490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908521.1;locus_tag=A3216_11630;product=hypothetical protein;protein_id=OAX70490.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 7358 7540 . - . ID=gene-A3216_11635;Name=A3216_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11635 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 7358 7540 . - 0 ID=cds-OAX70491.1;Parent=gene-A3216_11635;Dbxref=NCBI_GP:OAX70491.1;Name=OAX70491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11635;product=hypothetical protein;protein_id=OAX70491.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 7693 8400 . - . ID=gene-A3216_11640;Name=A3216_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11640 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 7693 8400 . - 0 ID=cds-OAX70492.1;Parent=gene-A3216_11640;Dbxref=NCBI_GP:OAX70492.1;Name=OAX70492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003911502.1;locus_tag=A3216_11640;product=hypothetical protein;protein_id=OAX70492.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 9545 10453 . - . ID=gene-A3216_11645;Name=A3216_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11645 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 9545 10453 . - 0 ID=cds-OAX70501.1;Parent=gene-A3216_11645;Dbxref=NCBI_GP:OAX70501.1;Name=OAX70501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908522.1;locus_tag=A3216_11645;product=EAL domain-containing protein;protein_id=OAX70501.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 11994 15314 . - . ID=gene-A3216_11650;Name=A3216_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11650 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 11994 15314 . - 0 ID=cds-OAX70493.1;Parent=gene-A3216_11650;Dbxref=NCBI_GP:OAX70493.1;Name=OAX70493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908523.1;locus_tag=A3216_11650;product=transcriptional regulator;protein_id=OAX70493.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 15493 15834 . - . ID=gene-A3216_11655;Name=A3216_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11655 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 15493 15834 . - 0 ID=cds-OAX70494.1;Parent=gene-A3216_11655;Dbxref=NCBI_GP:OAX70494.1;Name=OAX70494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11655;product=hypothetical protein;protein_id=OAX70494.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 17883 19259 . - . ID=gene-A3216_11660;Name=A3216_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11660 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 17883 19259 . - 0 ID=cds-OAX70495.1;Parent=gene-A3216_11660;Dbxref=NCBI_GP:OAX70495.1;Name=OAX70495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908524.1;locus_tag=A3216_11660;product=L-serine ammonia-lyase;protein_id=OAX70495.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 19517 19840 . + . ID=gene-A3216_11665;Name=A3216_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11665 GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 19517 19840 . + 0 ID=cds-OAX70496.1;Parent=gene-A3216_11665;Dbxref=NCBI_GP:OAX70496.1;Name=OAX70496.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBP1.1;locus_tag=A3216_11665;product=multidrug transporter;protein_id=OAX70496.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank pseudogene 19837 20396 . + . ID=gene-A3216_11670;Name=A3216_11670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11670;pseudo=true GCA_001648835.1|LVXE01000052.1 Protein Homology CDS 19837 20396 . + 0 ID=cds-A3216_11670;Parent=gene-A3216_11670;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003416005.1;locus_tag=A3216_11670;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 20761 20970 . - . ID=gene-A3216_11675;Name=A3216_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11675 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 20761 20970 . - 0 ID=cds-OAX70497.1;Parent=gene-A3216_11675;Dbxref=NCBI_GP:OAX70497.1;Name=OAX70497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11675;product=hypothetical protein;protein_id=OAX70497.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 22070 22145 . - . ID=gene-A3216_11680;Name=A3216_11680;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_11680 GCA_001648835.1|LVXE01000052.1 tRNAscan-SE tRNA 22070 22145 . - . ID=rna-A3216_11680;Parent=gene-A3216_11680;anticodon=(pos:complement(22110..22112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11680;product=tRNA-Ala GCA_001648835.1|LVXE01000052.1 tRNAscan-SE exon 22070 22145 . - . ID=exon-A3216_11680-1;Parent=rna-A3216_11680;anticodon=(pos:complement(22110..22112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11680;product=tRNA-Ala GCA_001648835.1|LVXE01000052.1 Genbank gene 22213 22431 . - . ID=gene-A3216_11685;Name=A3216_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11685 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 22213 22431 . - 0 ID=cds-OAX70498.1;Parent=gene-A3216_11685;Dbxref=NCBI_GP:OAX70498.1;Name=OAX70498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11685;product=hypothetical protein;protein_id=OAX70498.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 22421 22744 . - . ID=gene-A3216_11690;Name=A3216_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11690 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 22421 22744 . - 0 ID=cds-OAX70499.1;Parent=gene-A3216_11690;Dbxref=NCBI_GP:OAX70499.1;Name=OAX70499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11690;product=hypothetical protein;protein_id=OAX70499.1;transl_table=11 GCA_001648835.1|LVXE01000052.1 Genbank gene 22898 23197 . - . ID=gene-A3216_11695;Name=A3216_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11695 GCA_001648835.1|LVXE01000052.1 GeneMarkS+ CDS 22898 23197 . - 0 ID=cds-OAX70500.1;Parent=gene-A3216_11695;Dbxref=NCBI_GP:OAX70500.1;Name=OAX70500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11695;product=hypothetical protein;protein_id=OAX70500.1;transl_table=11 ##sequence-region LVXE01000053.1 1 19811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000053.1 Genbank region 1 19811 . + . ID=LVXE01000053.1:1..19811;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000053.1 Genbank gene 61 552 . - . ID=gene-A3216_11700;Name=A3216_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11700 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 61 552 . - 0 ID=cds-OAX70477.1;Parent=gene-A3216_11700;Dbxref=NCBI_GP:OAX70477.1;Name=OAX70477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908226.1;locus_tag=A3216_11700;product=DUF5130 domain-containing protein;protein_id=OAX70477.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 967 1614 . - . ID=gene-A3216_11705;Name=A3216_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11705 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 967 1614 . - 0 ID=cds-OAX70486.1;Parent=gene-A3216_11705;Dbxref=NCBI_GP:OAX70486.1;Name=OAX70486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875839.1;locus_tag=A3216_11705;product=endonuclease;protein_id=OAX70486.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 1774 2169 . + . ID=gene-A3216_11710;Name=A3216_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11710 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 1774 2169 . + 0 ID=cds-OAX70487.1;Parent=gene-A3216_11710;Dbxref=NCBI_GP:OAX70487.1;Name=OAX70487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008255158.1;locus_tag=A3216_11710;product=hypothetical protein;protein_id=OAX70487.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank pseudogene 2169 3547 . + . ID=gene-A3216_11715;Name=A3216_11715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11715;pseudo=true GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 2169 3547 . + 0 ID=cds-A3216_11715;Parent=gene-A3216_11715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003879946.1;locus_tag=A3216_11715;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 4133 4453 . - . ID=gene-A3216_11720;Name=A3216_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11720 GCA_001648835.1|LVXE01000053.1 GeneMarkS+ CDS 4133 4453 . - 0 ID=cds-OAX70478.1;Parent=gene-A3216_11720;Dbxref=NCBI_GP:OAX70478.1;Name=OAX70478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11720;product=hypothetical protein;protein_id=OAX70478.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 4553 9421 . - . ID=gene-A3216_11725;Name=A3216_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11725 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 4553 9421 . - 0 ID=cds-OAX70479.1;Parent=gene-A3216_11725;Dbxref=NCBI_GP:OAX70479.1;Name=OAX70479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908223.1;locus_tag=A3216_11725;product=NAD-glutamate dehydrogenase;protein_id=OAX70479.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 9480 11150 . - . ID=gene-A3216_11730;Name=A3216_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11730 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 9480 11150 . - 0 ID=cds-OAX70480.1;Parent=gene-A3216_11730;Dbxref=NCBI_GP:OAX70480.1;Name=OAX70480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008255146.1;locus_tag=A3216_11730;product=energy-dependent translational throttle protein EttA;protein_id=OAX70480.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 11968 14295 . - . ID=gene-A3216_11735;Name=A3216_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11735 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 11968 14295 . - 0 ID=cds-OAX70481.1;Parent=gene-A3216_11735;Dbxref=NCBI_GP:OAX70481.1;Name=OAX70481.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877436.1;locus_tag=A3216_11735;product=glycerol-3-phosphate acyltransferase;protein_id=OAX70481.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 14292 16031 . - . ID=gene-A3216_11740;Name=A3216_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11740 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 14292 16031 . - 0 ID=cds-OAX70482.1;Parent=gene-A3216_11740;Dbxref=NCBI_GP:OAX70482.1;Name=OAX70482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908220.1;locus_tag=A3216_11740;product=transferase;protein_id=OAX70482.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 16028 17503 . - . ID=gene-A3216_11745;Name=A3216_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11745 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 16028 17503 . - 0 ID=cds-OAX70483.1;Parent=gene-A3216_11745;Dbxref=NCBI_GP:OAX70483.1;Name=OAX70483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908219.1;locus_tag=A3216_11745;product=diacylglycerol O-acyltransferase;protein_id=OAX70483.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 17726 18187 . - . ID=gene-A3216_11750;Name=A3216_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11750 GCA_001648835.1|LVXE01000053.1 Protein Homology CDS 17726 18187 . - 0 ID=cds-OAX70484.1;Parent=gene-A3216_11750;Dbxref=NCBI_GP:OAX70484.1;Name=OAX70484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908218.1;locus_tag=A3216_11750;product=hypothetical protein;protein_id=OAX70484.1;transl_table=11 GCA_001648835.1|LVXE01000053.1 Genbank gene 18799 18872 . + . ID=gene-A3216_11755;Name=A3216_11755;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_11755 GCA_001648835.1|LVXE01000053.1 tRNAscan-SE tRNA 18799 18872 . + . ID=rna-A3216_11755;Parent=gene-A3216_11755;anticodon=(pos:18833..18835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11755;product=tRNA-Arg GCA_001648835.1|LVXE01000053.1 tRNAscan-SE exon 18799 18872 . + . ID=exon-A3216_11755-1;Parent=rna-A3216_11755;anticodon=(pos:18833..18835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_11755;product=tRNA-Arg GCA_001648835.1|LVXE01000053.1 Genbank gene 19186 19512 . + . ID=gene-A3216_11760;Name=A3216_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11760 GCA_001648835.1|LVXE01000053.1 GeneMarkS+ CDS 19186 19512 . + 0 ID=cds-OAX70485.1;Parent=gene-A3216_11760;Dbxref=NCBI_GP:OAX70485.1;Name=OAX70485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11760;product=hypothetical protein;protein_id=OAX70485.1;transl_table=11 ##sequence-region LVXE01000054.1 1 19711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000054.1 Genbank region 1 19711 . + . ID=LVXE01000054.1:1..19711;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000054.1 Genbank gene 458 2002 . + . ID=gene-A3216_11765;Name=A3216_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11765 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 458 2002 . + 0 ID=cds-OAX70462.1;Parent=gene-A3216_11765;Dbxref=NCBI_GP:OAX70462.1;Name=OAX70462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908269.1;locus_tag=A3216_11765;product=proteasome accessory factor PafA2;protein_id=OAX70462.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 2034 2225 . + . ID=gene-A3216_11770;Name=A3216_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11770 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 2034 2225 . + 0 ID=cds-OAX70463.1;Parent=gene-A3216_11770;Dbxref=NCBI_GP:OAX70463.1;Name=OAX70463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003887572.1;locus_tag=A3216_11770;product=ubiquitin-like protein Pup;protein_id=OAX70463.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 2222 3097 . + . ID=gene-A3216_11775;Name=A3216_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11775 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 2222 3097 . + 0 ID=cds-OAX70464.1;Parent=gene-A3216_11775;Dbxref=NCBI_GP:OAX70464.1;Name=OAX70464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49780.1;locus_tag=A3216_11775;product=proteasome subunit beta;protein_id=OAX70464.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 3094 3891 . + . ID=gene-A3216_11780;Name=A3216_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11780 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 3094 3891 . + 0 ID=cds-OAX70465.1;Parent=gene-A3216_11780;Dbxref=NCBI_GP:OAX70465.1;Name=OAX70465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9S375.1;locus_tag=A3216_11780;product=proteasome subunit alpha;protein_id=OAX70465.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 4014 4322 . + . ID=gene-A3216_11785;Name=A3216_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11785 GCA_001648835.1|LVXE01000054.1 GeneMarkS+ CDS 4014 4322 . + 0 ID=cds-OAX70466.1;Parent=gene-A3216_11785;Dbxref=NCBI_GP:OAX70466.1;Name=OAX70466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11785;product=hypothetical protein;protein_id=OAX70466.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 5608 5862 . + . ID=gene-A3216_11790;Name=A3216_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11790 GCA_001648835.1|LVXE01000054.1 GeneMarkS+ CDS 5608 5862 . + 0 ID=cds-OAX70467.1;Parent=gene-A3216_11790;Dbxref=NCBI_GP:OAX70467.1;Name=OAX70467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11790;product=hypothetical protein;protein_id=OAX70467.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 6357 7700 . + . ID=gene-A3216_11795;Name=A3216_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11795 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 6357 7700 . + 0 ID=cds-OAX70475.1;Parent=gene-A3216_11795;Dbxref=NCBI_GP:OAX70475.1;Name=OAX70475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008716320.1;locus_tag=A3216_11795;product=Pup--protein ligase;protein_id=OAX70475.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 7707 8702 . + . ID=gene-A3216_11800;Name=A3216_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11800 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 7707 8702 . + 0 ID=cds-OAX70468.1;Parent=gene-A3216_11800;Dbxref=NCBI_GP:OAX70468.1;Name=OAX70468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54076.1;locus_tag=A3216_11800;product=WYL domain-containing protein;protein_id=OAX70468.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 8699 9673 . + . ID=gene-A3216_11805;Name=A3216_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11805 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 8699 9673 . + 0 ID=cds-OAX70469.1;Parent=gene-A3216_11805;Dbxref=NCBI_GP:OAX70469.1;Name=OAX70469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54075.2;locus_tag=A3216_11805;product=protein pafC;protein_id=OAX70469.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 9746 10012 . + . ID=gene-A3216_11810;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=A3216_11810 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 9746 10012 . + 0 ID=cds-OAX70476.1;Parent=gene-A3216_11810;Dbxref=NCBI_GP:OAX70476.1;Name=OAX70476.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256319.1;locus_tag=A3216_11810;product=preprotein translocase subunit SecA;protein_id=OAX70476.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 10151 11011 . + . ID=gene-A3216_11815;Name=A3216_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11815 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 10151 11011 . + 0 ID=cds-OAX70470.1;Parent=gene-A3216_11815;Dbxref=NCBI_GP:OAX70470.1;Name=OAX70470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908277.1;locus_tag=A3216_11815;product=twin arginine-targeting protein translocase TatC;protein_id=OAX70470.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 11036 13798 . + . ID=gene-A3216_11820;Name=A3216_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11820 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 11036 13798 . + 0 ID=cds-OAX70471.1;Parent=gene-A3216_11820;Dbxref=NCBI_GP:OAX70471.1;Name=OAX70471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBD8.1;locus_tag=A3216_11820;product=DEAD/DEAH box helicase;protein_id=OAX70471.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 13863 14627 . + . ID=gene-A3216_11825;Name=A3216_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11825 GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 13863 14627 . + 0 ID=cds-OAX70472.1;Parent=gene-A3216_11825;Dbxref=NCBI_GP:OAX70472.1;Name=OAX70472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953366.1;locus_tag=A3216_11825;product=hypothetical protein;protein_id=OAX70472.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank pseudogene 14675 15590 . - . ID=gene-A3216_11830;Name=A3216_11830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11830;pseudo=true GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 14675 15590 . - 0 ID=cds-A3216_11830;Parent=gene-A3216_11830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011740309.1;locus_tag=A3216_11830;product=5'-3' exonuclease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank pseudogene 15626 16782 . + . ID=gene-A3216_11835;Name=A3216_11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11835;pseudo=true GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 15626 16782 . + 0 ID=cds-A3216_11835;Parent=gene-A3216_11835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953361.1;locus_tag=A3216_11835;product=dipeptidase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 17346 17552 . + . ID=gene-A3216_11840;Name=A3216_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11840 GCA_001648835.1|LVXE01000054.1 GeneMarkS+ CDS 17346 17552 . + 0 ID=cds-OAX70473.1;Parent=gene-A3216_11840;Dbxref=NCBI_GP:OAX70473.1;Name=OAX70473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11840;product=hypothetical protein;protein_id=OAX70473.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank gene 17816 18019 . + . ID=gene-A3216_11845;Name=A3216_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11845 GCA_001648835.1|LVXE01000054.1 GeneMarkS+ CDS 17816 18019 . + 0 ID=cds-OAX70474.1;Parent=gene-A3216_11845;Dbxref=NCBI_GP:OAX70474.1;Name=OAX70474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11845;product=hypothetical protein;protein_id=OAX70474.1;transl_table=11 GCA_001648835.1|LVXE01000054.1 Genbank pseudogene 18303 19271 . + . ID=gene-A3216_11850;Name=A3216_11850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11850;pseudo=true GCA_001648835.1|LVXE01000054.1 Protein Homology CDS 18303 19271 . + 0 ID=cds-A3216_11850;Parent=gene-A3216_11850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011599898.1;locus_tag=A3216_11850;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000055.1 1 19357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000055.1 Genbank region 1 19357 . + . ID=LVXE01000055.1:1..19357;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000055.1 Genbank gene 349 1233 . + . ID=gene-A3216_11855;Name=A3216_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11855 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 349 1233 . + 0 ID=cds-OAX70445.1;Parent=gene-A3216_11855;Dbxref=NCBI_GP:OAX70445.1;Name=OAX70445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167649.1;locus_tag=A3216_11855;product=pyrroline-5-carboxylate reductase;protein_id=OAX70445.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 1374 1634 . + . ID=gene-A3216_11860;Name=A3216_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11860 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 1374 1634 . + 0 ID=cds-OAX70446.1;Parent=gene-A3216_11860;Dbxref=NCBI_GP:OAX70446.1;Name=OAX70446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015304597.1;locus_tag=A3216_11860;product=DNA-binding protein;protein_id=OAX70446.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 1877 1978 . + . ID=gene-A3216_11865;Name=A3216_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11865 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 1877 1978 . + 0 ID=cds-OAX70460.1;Parent=gene-A3216_11865;Dbxref=NCBI_GP:OAX70460.1;Name=OAX70460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P0A5C9.1;locus_tag=A3216_11865;product=hypothetical protein;protein_id=OAX70460.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 2049 3143 . + . ID=gene-A3216_11870;Name=A3216_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11870 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 2049 3143 . + 0 ID=cds-OAX70447.1;Parent=gene-A3216_11870;Dbxref=NCBI_GP:OAX70447.1;Name=OAX70447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873708.1;locus_tag=A3216_11870;product=hypothetical protein;protein_id=OAX70447.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 3173 4252 . + . ID=gene-A3216_11875;Name=A3216_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11875 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 3173 4252 . + 0 ID=cds-OAX70461.1;Parent=gene-A3216_11875;Dbxref=NCBI_GP:OAX70461.1;Name=OAX70461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010950196.1;locus_tag=A3216_11875;product=hypothetical protein;protein_id=OAX70461.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 4281 5207 . - . ID=gene-A3216_11880;Name=A3216_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11880 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 4281 5207 . - 0 ID=cds-OAX70448.1;Parent=gene-A3216_11880;Dbxref=NCBI_GP:OAX70448.1;Name=OAX70448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49807.1;locus_tag=A3216_11880;product=SAM-dependent methyltransferase;protein_id=OAX70448.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 5218 5718 . - . ID=gene-A3216_11885;Name=A3216_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11885 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 5218 5718 . - 0 ID=cds-OAX70449.1;Parent=gene-A3216_11885;Dbxref=NCBI_GP:OAX70449.1;Name=OAX70449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768227.1;locus_tag=A3216_11885;product=hypothetical protein;protein_id=OAX70449.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 5822 6724 . - . ID=gene-A3216_11890;Name=A3216_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11890 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 5822 6724 . - 0 ID=cds-OAX70450.1;Parent=gene-A3216_11890;Dbxref=NCBI_GP:OAX70450.1;Name=OAX70450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49823.1;locus_tag=A3216_11890;product=hydrolase;protein_id=OAX70450.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 7826 9229 . + . ID=gene-A3216_11895;Name=A3216_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11895 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 7826 9229 . + 0 ID=cds-OAX70451.1;Parent=gene-A3216_11895;Dbxref=NCBI_GP:OAX70451.1;Name=OAX70451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46724.1;locus_tag=A3216_11895;product=glutamyl-tRNA reductase;protein_id=OAX70451.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 9243 10190 . + . ID=gene-A3216_11900;Name=A3216_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11900 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 9243 10190 . + 0 ID=cds-OAX70452.1;Parent=gene-A3216_11900;Dbxref=NCBI_GP:OAX70452.1;Name=OAX70452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73SS0.1;locus_tag=A3216_11900;product=hydroxymethylbilane synthase;protein_id=OAX70452.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 10212 11888 . + . ID=gene-A3216_11905;Name=A3216_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11905 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 10212 11888 . + 0 ID=cds-OAX70453.1;Parent=gene-A3216_11905;Dbxref=NCBI_GP:OAX70453.1;Name=OAX70453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020788700.1;locus_tag=A3216_11905;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=OAX70453.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 11935 12924 . + . ID=gene-A3216_11910;Name=A3216_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11910 GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 11935 12924 . + 0 ID=cds-OAX70454.1;Parent=gene-A3216_11910;Dbxref=NCBI_GP:OAX70454.1;Name=OAX70454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46723.1;locus_tag=A3216_11910;product=delta-aminolevulinic acid dehydratase;protein_id=OAX70454.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank pseudogene 12962 13463 . + . ID=gene-A3216_11915;Name=A3216_11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11915;pseudo=true GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 12962 13463 . + 0 ID=cds-A3216_11915;Parent=gene-A3216_11915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011742148.1;locus_tag=A3216_11915;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank pseudogene 14374 15283 . - . ID=gene-A3216_11920;Name=A3216_11920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_11920;pseudo=true GCA_001648835.1|LVXE01000055.1 Protein Homology CDS 14374 15283 . - 0 ID=cds-A3216_11920;Parent=gene-A3216_11920;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015292215.1;locus_tag=A3216_11920;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 16208 16600 . + . ID=gene-A3216_11925;Name=A3216_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11925 GCA_001648835.1|LVXE01000055.1 GeneMarkS+ CDS 16208 16600 . + 0 ID=cds-OAX70455.1;Parent=gene-A3216_11925;Dbxref=NCBI_GP:OAX70455.1;Name=OAX70455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11925;product=hypothetical protein;protein_id=OAX70455.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 16597 16788 . + . ID=gene-A3216_11930;Name=A3216_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11930 GCA_001648835.1|LVXE01000055.1 GeneMarkS+ CDS 16597 16788 . + 0 ID=cds-OAX70456.1;Parent=gene-A3216_11930;Dbxref=NCBI_GP:OAX70456.1;Name=OAX70456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11930;product=hypothetical protein;protein_id=OAX70456.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 17331 17651 . + . ID=gene-A3216_11935;Name=A3216_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11935 GCA_001648835.1|LVXE01000055.1 GeneMarkS+ CDS 17331 17651 . + 0 ID=cds-OAX70457.1;Parent=gene-A3216_11935;Dbxref=NCBI_GP:OAX70457.1;Name=OAX70457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11935;product=hypothetical protein;protein_id=OAX70457.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 17828 18052 . + . ID=gene-A3216_11940;Name=A3216_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11940 GCA_001648835.1|LVXE01000055.1 GeneMarkS+ CDS 17828 18052 . + 0 ID=cds-OAX70458.1;Parent=gene-A3216_11940;Dbxref=NCBI_GP:OAX70458.1;Name=OAX70458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11940;product=hypothetical protein;protein_id=OAX70458.1;transl_table=11 GCA_001648835.1|LVXE01000055.1 Genbank gene 18053 18370 . + . ID=gene-A3216_11945;Name=A3216_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11945 GCA_001648835.1|LVXE01000055.1 GeneMarkS+ CDS 18053 18370 . + 0 ID=cds-OAX70459.1;Parent=gene-A3216_11945;Dbxref=NCBI_GP:OAX70459.1;Name=OAX70459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11945;product=hypothetical protein;protein_id=OAX70459.1;transl_table=11 ##sequence-region LVXE01000056.1 1 19279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000056.1 Genbank region 1 19279 . + . ID=LVXE01000056.1:1..19279;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000056.1 Genbank gene 350 598 . - . ID=gene-A3216_11950;Name=A3216_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11950 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 350 598 . - 0 ID=cds-OAX70435.1;Parent=gene-A3216_11950;Dbxref=NCBI_GP:OAX70435.1;Name=OAX70435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907560.1;locus_tag=A3216_11950;product=hypothetical protein;protein_id=OAX70435.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 600 797 . + . ID=gene-A3216_11955;Name=A3216_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11955 GCA_001648835.1|LVXE01000056.1 GeneMarkS+ CDS 600 797 . + 0 ID=cds-OAX70436.1;Parent=gene-A3216_11955;Dbxref=NCBI_GP:OAX70436.1;Name=OAX70436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11955;product=hypothetical protein;protein_id=OAX70436.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 799 1086 . + . ID=gene-A3216_11960;Name=A3216_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11960 GCA_001648835.1|LVXE01000056.1 GeneMarkS+ CDS 799 1086 . + 0 ID=cds-OAX70437.1;Parent=gene-A3216_11960;Dbxref=NCBI_GP:OAX70437.1;Name=OAX70437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11960;product=hypothetical protein;protein_id=OAX70437.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 2400 2654 . + . ID=gene-A3216_11965;Name=A3216_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11965 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 2400 2654 . + 0 ID=cds-OAX70438.1;Parent=gene-A3216_11965;Dbxref=NCBI_GP:OAX70438.1;Name=OAX70438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907559.1;locus_tag=A3216_11965;product=hypothetical protein;protein_id=OAX70438.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 2741 3055 . + . ID=gene-A3216_11970;Name=A3216_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11970 GCA_001648835.1|LVXE01000056.1 GeneMarkS+ CDS 2741 3055 . + 0 ID=cds-OAX70439.1;Parent=gene-A3216_11970;Dbxref=NCBI_GP:OAX70439.1;Name=OAX70439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11970;product=hypothetical protein;protein_id=OAX70439.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 3110 3493 . - . ID=gene-A3216_11975;Name=A3216_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11975 GCA_001648835.1|LVXE01000056.1 GeneMarkS+ CDS 3110 3493 . - 0 ID=cds-OAX70440.1;Parent=gene-A3216_11975;Dbxref=NCBI_GP:OAX70440.1;Name=OAX70440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_11975;product=hypothetical protein;protein_id=OAX70440.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 4390 10740 . - . ID=gene-A3216_11980;Name=A3216_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11980 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 4390 10740 . - 0 ID=cds-OAX70441.1;Parent=gene-A3216_11980;Dbxref=NCBI_GP:OAX70441.1;Name=OAX70441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907558.1;locus_tag=A3216_11980;product=polyketide synthase;protein_id=OAX70441.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 11209 12948 . + . ID=gene-A3216_11985;Name=A3216_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11985 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 11209 12948 . + 0 ID=cds-OAX70442.1;Parent=gene-A3216_11985;Dbxref=NCBI_GP:OAX70442.1;Name=OAX70442.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907557.1;locus_tag=A3216_11985;product=acyl-CoA synthetase;protein_id=OAX70442.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 13000 15708 . + . ID=gene-A3216_11990;Name=A3216_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11990 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 13000 15708 . + 0 ID=cds-OAX70443.1;Parent=gene-A3216_11990;Dbxref=NCBI_GP:OAX70443.1;Name=OAX70443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907556.1;locus_tag=A3216_11990;product=hypothetical protein;protein_id=OAX70443.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank gene 15709 16410 . - . ID=gene-A3216_11995;Name=A3216_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_11995 GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 15709 16410 . - 0 ID=cds-OAX70444.1;Parent=gene-A3216_11995;Dbxref=NCBI_GP:OAX70444.1;Name=OAX70444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD80.1;locus_tag=A3216_11995;product=hypothetical protein;protein_id=OAX70444.1;transl_table=11 GCA_001648835.1|LVXE01000056.1 Genbank pseudogene 16477 19279 . - . ID=gene-A3216_12000;Name=A3216_12000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12000;pseudo=true GCA_001648835.1|LVXE01000056.1 Protein Homology CDS 16477 19279 . - 1 ID=cds-A3216_12000;Parent=gene-A3216_12000;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907554.1;locus_tag=A3216_12000;product=polyketide synthase;pseudo=true;transl_table=11 ##sequence-region LVXE01000057.1 1 18921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000057.1 Genbank region 1 18921 . + . ID=LVXE01000057.1:1..18921;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000057.1 Genbank pseudogene 1 196 . + . ID=gene-A3216_12005;Name=A3216_12005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12005;pseudo=true GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 1 196 . + 1 ID=cds-A3216_12005;Parent=gene-A3216_12005;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12005;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 505 984 . - . ID=gene-A3216_12010;Name=A3216_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12010 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 505 984 . - 0 ID=cds-OAX70418.1;Parent=gene-A3216_12010;Dbxref=NCBI_GP:OAX70418.1;Name=OAX70418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12010;product=hypothetical protein;protein_id=OAX70418.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 1263 1466 . + . ID=gene-A3216_12015;Name=A3216_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12015 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 1263 1466 . + 0 ID=cds-OAX70419.1;Parent=gene-A3216_12015;Dbxref=NCBI_GP:OAX70419.1;Name=OAX70419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12015;product=hypothetical protein;protein_id=OAX70419.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 1469 1789 . - . ID=gene-A3216_12020;Name=A3216_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12020 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 1469 1789 . - 0 ID=cds-OAX70420.1;Parent=gene-A3216_12020;Dbxref=NCBI_GP:OAX70420.1;Name=OAX70420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12020;product=hypothetical protein;protein_id=OAX70420.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 1882 2184 . + . ID=gene-A3216_12025;Name=A3216_12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12025 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 1882 2184 . + 0 ID=cds-OAX70421.1;Parent=gene-A3216_12025;Dbxref=NCBI_GP:OAX70421.1;Name=OAX70421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12025;product=hypothetical protein;protein_id=OAX70421.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 2394 2594 . - . ID=gene-A3216_12030;Name=A3216_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12030 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 2394 2594 . - 0 ID=cds-OAX70422.1;Parent=gene-A3216_12030;Dbxref=NCBI_GP:OAX70422.1;Name=OAX70422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12030;product=hypothetical protein;protein_id=OAX70422.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 3049 4878 . - . ID=gene-A3216_12035;Name=A3216_12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12035 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 3049 4878 . - 0 ID=cds-OAX70433.1;Parent=gene-A3216_12035;Dbxref=NCBI_GP:OAX70433.1;Name=OAX70433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018599607.1;locus_tag=A3216_12035;product=proteasome ATPase;protein_id=OAX70433.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 5166 5750 . + . ID=gene-A3216_12040;Name=A3216_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12040 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 5166 5750 . + 0 ID=cds-OAX70423.1;Parent=gene-A3216_12040;Dbxref=NCBI_GP:OAX70423.1;Name=OAX70423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49803.1;locus_tag=A3216_12040;product=hypothetical protein;protein_id=OAX70423.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 5759 6052 . + . ID=gene-A3216_12045;Name=A3216_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12045 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 5759 6052 . + 0 ID=cds-OAX70424.1;Parent=gene-A3216_12045;Dbxref=NCBI_GP:OAX70424.1;Name=OAX70424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256301.1;locus_tag=A3216_12045;product=hypothetical protein;protein_id=OAX70424.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 6166 7011 . - . ID=gene-A3216_12050;Name=A3216_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12050 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 6166 7011 . - 0 ID=cds-OAX70425.1;Parent=gene-A3216_12050;Dbxref=NCBI_GP:OAX70425.1;Name=OAX70425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382450.1;locus_tag=A3216_12050;product=SAM-dependent methyltransferase;protein_id=OAX70425.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 7085 7969 . + . ID=gene-A3216_12055;Name=A3216_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12055 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 7085 7969 . + 0 ID=cds-OAX70426.1;Parent=gene-A3216_12055;Dbxref=NCBI_GP:OAX70426.1;Name=OAX70426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908264.1;locus_tag=A3216_12055;product=recombinase RecB;protein_id=OAX70426.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank pseudogene 8075 9421 . - . ID=gene-A3216_12060;Name=A3216_12060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12060;pseudo=true GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 8075 9421 . - 0 ID=cds-A3216_12060;Parent=gene-A3216_12060;Note=Enables the enzymatic reduction of mercuric ions to elemental mercury%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711538.1;locus_tag=A3216_12060;product=mercuric reductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 9410 9721 . + . ID=gene-A3216_12065;Name=A3216_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12065 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 9410 9721 . + 0 ID=cds-OAX70427.1;Parent=gene-A3216_12065;Dbxref=NCBI_GP:OAX70427.1;Name=OAX70427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12065;product=hypothetical protein;protein_id=OAX70427.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 10009 10872 . - . ID=gene-A3216_12070;Name=A3216_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12070 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 10009 10872 . - 0 ID=cds-OAX70428.1;Parent=gene-A3216_12070;Dbxref=NCBI_GP:OAX70428.1;Name=OAX70428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015356102.1;locus_tag=A3216_12070;product=ATP phosphoribosyltransferase;protein_id=OAX70428.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 10875 11156 . - . ID=gene-A3216_12075;Name=A3216_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12075 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 10875 11156 . - 0 ID=cds-OAX70429.1;Parent=gene-A3216_12075;Dbxref=NCBI_GP:OAX70429.1;Name=OAX70429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908262.1;locus_tag=A3216_12075;product=phosphoribosyl-ATP diphosphatase;protein_id=OAX70429.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 11883 12290 . + . ID=gene-A3216_12080;Name=A3216_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12080 GCA_001648835.1|LVXE01000057.1 GeneMarkS+ CDS 11883 12290 . + 0 ID=cds-OAX70430.1;Parent=gene-A3216_12080;Dbxref=NCBI_GP:OAX70430.1;Name=OAX70430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12080;product=hypothetical protein;protein_id=OAX70430.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 12651 16271 . - . ID=gene-A3216_12085;Name=A3216_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12085 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 12651 16271 . - 0 ID=cds-OAX70431.1;Parent=gene-A3216_12085;Dbxref=NCBI_GP:OAX70431.1;Name=OAX70431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q49775.3;locus_tag=A3216_12085;product=methionine synthase;protein_id=OAX70431.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 16452 17303 . + . ID=gene-A3216_12090;Name=A3216_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12090 GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 16452 17303 . + 0 ID=cds-OAX70434.1;Parent=gene-A3216_12090;Dbxref=NCBI_GP:OAX70434.1;Name=OAX70434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878095.1;locus_tag=A3216_12090;product=carboxylate--amine ligase;protein_id=OAX70434.1;transl_table=11 GCA_001648835.1|LVXE01000057.1 Genbank gene 17440 18921 . + . ID=gene-A3216_12095;Name=A3216_12095;end_range=18921,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12095;partial=true GCA_001648835.1|LVXE01000057.1 Protein Homology CDS 17440 18921 . + 0 ID=cds-OAX70432.1;Parent=gene-A3216_12095;Dbxref=NCBI_GP:OAX70432.1;Name=OAX70432.1;end_range=18921,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009953407.1;locus_tag=A3216_12095;partial=true;product=L-asparagine permease;protein_id=OAX70432.1;transl_table=11 ##sequence-region LVXE01000058.1 1 18415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000058.1 Genbank region 1 18415 . + . ID=LVXE01000058.1:1..18415;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000058.1 Genbank gene 815 1207 . - . ID=gene-A3216_12100;Name=A3216_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12100 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 815 1207 . - 0 ID=cds-OAX70405.1;Parent=gene-A3216_12100;Dbxref=NCBI_GP:OAX70405.1;Name=OAX70405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907652.1;locus_tag=A3216_12100;product=hypothetical protein;protein_id=OAX70405.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 2386 2625 . - . ID=gene-A3216_12105;Name=A3216_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12105 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 2386 2625 . - 0 ID=cds-OAX70406.1;Parent=gene-A3216_12105;Dbxref=NCBI_GP:OAX70406.1;Name=OAX70406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907653.1;locus_tag=A3216_12105;product=hypothetical protein;protein_id=OAX70406.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 3554 3736 . - . ID=gene-A3216_12110;Name=A3216_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12110 GCA_001648835.1|LVXE01000058.1 GeneMarkS+ CDS 3554 3736 . - 0 ID=cds-OAX70407.1;Parent=gene-A3216_12110;Dbxref=NCBI_GP:OAX70407.1;Name=OAX70407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12110;product=hypothetical protein;protein_id=OAX70407.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 4234 4443 . - . ID=gene-A3216_12115;Name=A3216_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12115 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 4234 4443 . - 0 ID=cds-OAX70408.1;Parent=gene-A3216_12115;Dbxref=NCBI_GP:OAX70408.1;Name=OAX70408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907654.1;locus_tag=A3216_12115;product=hypothetical protein;protein_id=OAX70408.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 cmsearch binding_site 6166 6276 . + . ID=id-LVXE01000058.1:6166..6276;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001648835.1|LVXE01000058.1 Genbank gene 6268 7911 . + . ID=gene-A3216_12120;Name=A3216_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12120 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 6268 7911 . + 0 ID=cds-OAX70409.1;Parent=gene-A3216_12120;Dbxref=NCBI_GP:OAX70409.1;Name=OAX70409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBL0.1;locus_tag=A3216_12120;product=phosphomethylpyrimidine synthase;protein_id=OAX70409.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 7908 8747 . + . ID=gene-A3216_12125;Name=A3216_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12125 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 7908 8747 . + 0 ID=cds-OAX70410.1;Parent=gene-A3216_12125;Dbxref=NCBI_GP:OAX70410.1;Name=OAX70410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBL1.1;locus_tag=A3216_12125;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=OAX70410.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 9426 10211 . - . ID=gene-A3216_12130;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=A3216_12130 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 9426 10211 . - 0 ID=cds-OAX70411.1;Parent=gene-A3216_12130;Dbxref=NCBI_GP:OAX70411.1;Name=OAX70411.1;Note=functions in thiamine (vitamin B1) biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;gbkey=CDS;gene=thiG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBL2.1;locus_tag=A3216_12130;product=thiazole synthase;protein_id=OAX70411.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 10204 10428 . - . ID=gene-A3216_12135;Name=A3216_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12135 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 10204 10428 . - 0 ID=cds-OAX70412.1;Parent=gene-A3216_12135;Dbxref=NCBI_GP:OAX70412.1;Name=OAX70412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014209698.1;locus_tag=A3216_12135;product=thiamine biosynthesis protein ThiS;protein_id=OAX70412.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 10436 11458 . - . ID=gene-A3216_12140;Name=A3216_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12140 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 10436 11458 . - 0 ID=cds-OAX70413.1;Parent=gene-A3216_12140;Dbxref=NCBI_GP:OAX70413.1;Name=OAX70413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907659.1;locus_tag=A3216_12140;product=glycine oxidase ThiO;protein_id=OAX70413.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 cmsearch binding_site 11449 11587 . - . ID=id-LVXE01000058.1:11449..11587;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001648835.1|LVXE01000058.1 Genbank gene 11616 12323 . + . ID=gene-A3216_12145;Name=A3216_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12145 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 11616 12323 . + 0 ID=cds-OAX70414.1;Parent=gene-A3216_12145;Dbxref=NCBI_GP:OAX70414.1;Name=OAX70414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBL5.1;locus_tag=A3216_12145;product=thiamine-phosphate diphosphorylase;protein_id=OAX70414.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank pseudogene 12316 12919 . - . ID=gene-A3216_12150;Name=A3216_12150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12150;pseudo=true GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 12316 12919 . - 0 ID=cds-A3216_12150;Parent=gene-A3216_12150;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003918073.1;locus_tag=A3216_12150;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 13115 14434 . + . ID=gene-A3216_12155;Name=A3216_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12155 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 13115 14434 . + 0 ID=cds-OAX70415.1;Parent=gene-A3216_12155;Dbxref=NCBI_GP:OAX70415.1;Name=OAX70415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003932871.1;locus_tag=A3216_12155;product=hypothetical protein;protein_id=OAX70415.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 14434 15411 . + . ID=gene-A3216_12160;Name=A3216_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12160 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 14434 15411 . + 0 ID=cds-OAX70417.1;Parent=gene-A3216_12160;Dbxref=NCBI_GP:OAX70417.1;Name=OAX70417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009952605.1;locus_tag=A3216_12160;product=ABC transporter substrate-binding protein;protein_id=OAX70417.1;transl_table=11 GCA_001648835.1|LVXE01000058.1 Genbank gene 15411 17714 . + . ID=gene-A3216_12165;Name=A3216_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12165 GCA_001648835.1|LVXE01000058.1 Protein Homology CDS 15411 17714 . + 0 ID=cds-OAX70416.1;Parent=gene-A3216_12165;Dbxref=NCBI_GP:OAX70416.1;Name=OAX70416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907662.1;locus_tag=A3216_12165;product=serine/threonine protein kinase;protein_id=OAX70416.1;transl_table=11 ##sequence-region LVXE01000059.1 1 18276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000059.1 Genbank region 1 18276 . + . ID=LVXE01000059.1:1..18276;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000059.1 Genbank pseudogene 1 206 . - . ID=gene-A3216_12170;Name=A3216_12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12170;pseudo=true GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 1 206 . - 0 ID=cds-A3216_12170;Parent=gene-A3216_12170;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12170;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 2413 5592 . + . ID=gene-A3216_12175;Name=A3216_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12175 GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 2413 5592 . + 0 ID=cds-OAX70395.1;Parent=gene-A3216_12175;Dbxref=NCBI_GP:OAX70395.1;Name=OAX70395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7E5.1;locus_tag=A3216_12175;product=isoleucine--tRNA ligase;protein_id=OAX70395.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 5808 6074 . - . ID=gene-A3216_12180;Name=A3216_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12180 GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 5808 6074 . - 0 ID=cds-OAX70396.1;Parent=gene-A3216_12180;Dbxref=NCBI_GP:OAX70396.1;Name=OAX70396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12180;product=hypothetical protein;protein_id=OAX70396.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank pseudogene 6317 7684 . + . ID=gene-A3216_12185;Name=A3216_12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12185;pseudo=true GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 6317 7684 . + 0 ID=cds-A3216_12185;Parent=gene-A3216_12185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015293024.1;locus_tag=A3216_12185;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 7649 8581 . - . ID=gene-A3216_12190;Name=A3216_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12190 GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 7649 8581 . - 0 ID=cds-OAX70404.1;Parent=gene-A3216_12190;Dbxref=NCBI_GP:OAX70404.1;Name=OAX70404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7E6.1;locus_tag=A3216_12190;product=L-asparaginase;protein_id=OAX70404.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 8656 9261 . + . ID=gene-A3216_12195;Name=A3216_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12195 GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 8656 9261 . + 0 ID=cds-OAX70397.1;Parent=gene-A3216_12195;Dbxref=NCBI_GP:OAX70397.1;Name=OAX70397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7E7.1;locus_tag=A3216_12195;product=signal peptidase II;protein_id=OAX70397.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 9380 10306 . + . ID=gene-A3216_12200;Name=A3216_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12200 GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 9380 10306 . + 0 ID=cds-OAX70398.1;Parent=gene-A3216_12200;Dbxref=NCBI_GP:OAX70398.1;Name=OAX70398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908195.1;locus_tag=A3216_12200;product=RNA pseudouridine synthase;protein_id=OAX70398.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 12230 12421 . - . ID=gene-A3216_12205;Name=A3216_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12205 GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 12230 12421 . - 0 ID=cds-OAX70399.1;Parent=gene-A3216_12205;Dbxref=NCBI_GP:OAX70399.1;Name=OAX70399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12205;product=hypothetical protein;protein_id=OAX70399.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 12604 12879 . + . ID=gene-A3216_12210;Name=A3216_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12210 GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 12604 12879 . + 0 ID=cds-OAX70400.1;Parent=gene-A3216_12210;Dbxref=NCBI_GP:OAX70400.1;Name=OAX70400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12210;product=hypothetical protein;protein_id=OAX70400.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 13142 13429 . - . ID=gene-A3216_12215;Name=A3216_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12215 GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 13142 13429 . - 0 ID=cds-OAX70401.1;Parent=gene-A3216_12215;Dbxref=NCBI_GP:OAX70401.1;Name=OAX70401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12215;product=hypothetical protein;protein_id=OAX70401.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 13434 13700 . - . ID=gene-A3216_12220;Name=A3216_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12220 GCA_001648835.1|LVXE01000059.1 GeneMarkS+ CDS 13434 13700 . - 0 ID=cds-OAX70402.1;Parent=gene-A3216_12220;Dbxref=NCBI_GP:OAX70402.1;Name=OAX70402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12220;product=hypothetical protein;protein_id=OAX70402.1;transl_table=11 GCA_001648835.1|LVXE01000059.1 Genbank gene 14641 18174 . + . ID=gene-A3216_12225;Name=A3216_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12225 GCA_001648835.1|LVXE01000059.1 Protein Homology CDS 14641 18174 . + 0 ID=cds-OAX70403.1;Parent=gene-A3216_12225;Dbxref=NCBI_GP:OAX70403.1;Name=OAX70403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9X7F0.1;locus_tag=A3216_12225;product=DNA polymerase III subunit alpha;protein_id=OAX70403.1;transl_table=11 ##sequence-region LVXE01000006.1 1 76685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000006.1 Genbank region 1 76685 . + . ID=LVXE01000006.1:1..76685;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 1 226 . + . ID=gene-A3216_03540;Name=A3216_03540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03540;pseudo=true GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 1 226 . + 1 ID=cds-A3216_03540;Parent=gene-A3216_03540;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03540;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 414 656 . + . ID=gene-A3216_03545;Name=A3216_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03545 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 414 656 . + 0 ID=cds-OAX71749.1;Parent=gene-A3216_03545;Dbxref=NCBI_GP:OAX71749.1;Name=OAX71749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03545;product=hypothetical protein;protein_id=OAX71749.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 793 1113 . - . ID=gene-A3216_03550;Name=A3216_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03550 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 793 1113 . - 0 ID=cds-OAX71802.1;Parent=gene-A3216_03550;Dbxref=NCBI_GP:OAX71802.1;Name=OAX71802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908403.1;locus_tag=A3216_03550;product=DNA-binding protein;protein_id=OAX71802.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 1313 2356 . - . ID=gene-A3216_03555;Name=A3216_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03555 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 1313 2356 . - 0 ID=cds-OAX71750.1;Parent=gene-A3216_03555;Dbxref=NCBI_GP:OAX71750.1;Name=OAX71750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007775127.1;locus_tag=A3216_03555;product=transcription termination/antitermination protein NusA;protein_id=OAX71750.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 2413 2888 . - . ID=gene-A3216_03560;Name=A3216_03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03560;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 2413 2888 . - 0 ID=cds-A3216_03560;Parent=gene-A3216_03560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355252.1;locus_tag=A3216_03560;product=ribosome maturation factor RimP;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 3016 3552 . + . ID=gene-A3216_03565;Name=A3216_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03565 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 3016 3552 . + 0 ID=cds-OAX71751.1;Parent=gene-A3216_03565;Dbxref=NCBI_GP:OAX71751.1;Name=OAX71751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908405.1;locus_tag=A3216_03565;product=hypothetical protein;protein_id=OAX71751.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 3549 4046 . + . ID=gene-A3216_03570;Name=A3216_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03570 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 3549 4046 . + 0 ID=cds-OAX71752.1;Parent=gene-A3216_03570;Dbxref=NCBI_GP:OAX71752.1;Name=OAX71752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908406.1;locus_tag=A3216_03570;product=hypothetical protein;protein_id=OAX71752.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 4071 5675 . - . ID=gene-A3216_03575;Name=A3216_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03575 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 4071 5675 . - 0 ID=cds-OAX71753.1;Parent=gene-A3216_03575;Dbxref=NCBI_GP:OAX71753.1;Name=OAX71753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014001460.1;locus_tag=A3216_03575;product=MFS transporter;protein_id=OAX71753.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 5687 6907 . - . ID=gene-A3216_03580;Name=A3216_03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03580;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 5687 6907 . - 0 ID=cds-A3216_03580;Parent=gene-A3216_03580;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003927155.1;locus_tag=A3216_03580;product=siroheme synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 6956 8271 . - . ID=gene-A3216_03585;Name=A3216_03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03585;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 6956 8271 . - 0 ID=cds-A3216_03585;Parent=gene-A3216_03585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003933186.1;locus_tag=A3216_03585;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 8373 9182 . - . ID=gene-A3216_03590;Name=A3216_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03590 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 8373 9182 . - 0 ID=cds-OAX71754.1;Parent=gene-A3216_03590;Dbxref=NCBI_GP:OAX71754.1;Name=OAX71754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03590;product=hypothetical protein;protein_id=OAX71754.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 9865 10152 . - . ID=gene-A3216_03595;Name=A3216_03595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03595;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 9865 10152 . - 0 ID=cds-A3216_03595;Parent=gene-A3216_03595;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008258755.1;locus_tag=A3216_03595;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 10149 11634 . - . ID=gene-A3216_03600;Name=A3216_03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03600;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 10149 11634 . - 0 ID=cds-A3216_03600;Parent=gene-A3216_03600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HJU4.1;locus_tag=A3216_03600;product=malate:quinone oxidoreductase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 12128 12382 . - . ID=gene-A3216_03605;Name=A3216_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03605 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 12128 12382 . - 0 ID=cds-OAX71755.1;Parent=gene-A3216_03605;Dbxref=NCBI_GP:OAX71755.1;Name=OAX71755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03605;product=hypothetical protein;protein_id=OAX71755.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 13042 13344 . + . ID=gene-A3216_03610;Name=A3216_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03610 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 13042 13344 . + 0 ID=cds-OAX71756.1;Parent=gene-A3216_03610;Dbxref=NCBI_GP:OAX71756.1;Name=OAX71756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03610;product=hypothetical protein;protein_id=OAX71756.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 13434 13682 . + . ID=gene-A3216_03615;Name=A3216_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03615 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 13434 13682 . + 0 ID=cds-OAX71757.1;Parent=gene-A3216_03615;Dbxref=NCBI_GP:OAX71757.1;Name=OAX71757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03615;product=hypothetical protein;protein_id=OAX71757.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 13956 14312 . - . ID=gene-A3216_03620;Name=A3216_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03620 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 13956 14312 . - 0 ID=cds-OAX71758.1;Parent=gene-A3216_03620;Dbxref=NCBI_GP:OAX71758.1;Name=OAX71758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03620;product=hypothetical protein;protein_id=OAX71758.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 14465 15596 . + . ID=gene-A3216_03625;Name=A3216_03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03625;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 14465 15596 . + 0 ID=cds-A3216_03625;Parent=gene-A3216_03625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725634.1;locus_tag=A3216_03625;product=nickel transporter;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 15901 16299 . + . ID=gene-A3216_03630;Name=A3216_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03630 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 15901 16299 . + 0 ID=cds-OAX71803.1;Parent=gene-A3216_03630;Dbxref=NCBI_GP:OAX71803.1;Name=OAX71803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908408.1;locus_tag=A3216_03630;product=hypothetical protein;protein_id=OAX71803.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 16760 17509 . - . ID=gene-A3216_03635;Name=A3216_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03635 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 16760 17509 . - 0 ID=cds-OAX71759.1;Parent=gene-A3216_03635;Dbxref=NCBI_GP:OAX71759.1;Name=OAX71759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908409.1;locus_tag=A3216_03635;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=OAX71759.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 17550 17768 . - . ID=gene-A3216_03640;Name=A3216_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03640 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 17550 17768 . - 0 ID=cds-OAX71760.1;Parent=gene-A3216_03640;Dbxref=NCBI_GP:OAX71760.1;Name=OAX71760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03640;product=hypothetical protein;protein_id=OAX71760.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 17946 18239 . - . ID=gene-A3216_03645;Name=A3216_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03645 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 17946 18239 . - 0 ID=cds-OAX71804.1;Parent=gene-A3216_03645;Dbxref=NCBI_GP:OAX71804.1;Name=OAX71804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908410.1;locus_tag=A3216_03645;product=hypothetical protein;protein_id=OAX71804.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 18663 19520 . - . ID=gene-A3216_03650;Name=A3216_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03650 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 18663 19520 . - 0 ID=cds-OAX71761.1;Parent=gene-A3216_03650;Dbxref=NCBI_GP:OAX71761.1;Name=OAX71761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908411.1;locus_tag=A3216_03650;product=type I methionyl aminopeptidase;protein_id=OAX71761.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 19712 21538 . - . ID=gene-A3216_03655;Name=A3216_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03655 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 19712 21538 . - 0 ID=cds-OAX71762.1;Parent=gene-A3216_03655;Dbxref=NCBI_GP:OAX71762.1;Name=OAX71762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908412.1;locus_tag=A3216_03655;product=penicillin-binding protein;protein_id=OAX71762.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 22704 23470 . - . ID=gene-A3216_03660;Name=A3216_03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03660;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 22704 23470 . - 0 ID=cds-A3216_03660;Parent=gene-A3216_03660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003887856.1;locus_tag=A3216_03660;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 23538 24716 . - . ID=gene-A3216_03665;Name=A3216_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03665 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 23538 24716 . - 0 ID=cds-OAX71763.1;Parent=gene-A3216_03665;Dbxref=NCBI_GP:OAX71763.1;Name=OAX71763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBU5.1;locus_tag=A3216_03665;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=OAX71763.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 24769 25983 . - . ID=gene-A3216_03670;Name=A3216_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03670 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 24769 25983 . - 0 ID=cds-OAX71764.1;Parent=gene-A3216_03670;Dbxref=NCBI_GP:OAX71764.1;Name=OAX71764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908414.1;locus_tag=A3216_03670;product=zinc metalloprotease;protein_id=OAX71764.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 25992 27212 . - . ID=gene-A3216_03675;Name=A3216_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03675 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 25992 27212 . - 0 ID=cds-OAX71765.1;Parent=gene-A3216_03675;Dbxref=NCBI_GP:OAX71765.1;Name=OAX71765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBU3.1;locus_tag=A3216_03675;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=OAX71765.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 27367 27621 . + . ID=gene-A3216_03680;Name=A3216_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03680 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 27367 27621 . + 0 ID=cds-OAX71766.1;Parent=gene-A3216_03680;Dbxref=NCBI_GP:OAX71766.1;Name=OAX71766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016705993.1;locus_tag=A3216_03680;product=hypothetical protein;protein_id=OAX71766.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 28448 28798 . - . ID=gene-A3216_03685;Name=A3216_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03685 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 28448 28798 . - 0 ID=cds-OAX71767.1;Parent=gene-A3216_03685;Dbxref=NCBI_GP:OAX71767.1;Name=OAX71767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03685;product=hypothetical protein;protein_id=OAX71767.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 29074 29316 . - . ID=gene-A3216_03690;Name=A3216_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03690 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 29074 29316 . - 0 ID=cds-OAX71768.1;Parent=gene-A3216_03690;Dbxref=NCBI_GP:OAX71768.1;Name=OAX71768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03690;product=hypothetical protein;protein_id=OAX71768.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 30616 31652 . - . ID=gene-A3216_03695;Name=A3216_03695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03695;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 30616 31652 . - 0 ID=cds-A3216_03695;Parent=gene-A3216_03695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626604.1;locus_tag=A3216_03695;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 31675 32613 . - . ID=gene-A3216_03700;Name=A3216_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03700 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 31675 32613 . - 0 ID=cds-OAX71769.1;Parent=gene-A3216_03700;Dbxref=NCBI_GP:OAX71769.1;Name=OAX71769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBU1.1;locus_tag=A3216_03700;product=phosphatidate cytidylyltransferase;protein_id=OAX71769.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 32645 33202 . - . ID=gene-A3216_03705;Name=A3216_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03705 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 32645 33202 . - 0 ID=cds-OAX71770.1;Parent=gene-A3216_03705;Dbxref=NCBI_GP:OAX71770.1;Name=OAX71770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019969673.1;locus_tag=A3216_03705;product=ribosome recycling factor;protein_id=OAX71770.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 33261 34100 . - . ID=gene-A3216_03710;Name=A3216_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03710 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 33261 34100 . - 0 ID=cds-OAX71771.1;Parent=gene-A3216_03710;Dbxref=NCBI_GP:OAX71771.1;Name=OAX71771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908419.1;locus_tag=A3216_03710;product=UMP kinase;protein_id=OAX71771.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 34951 35699 . + . ID=gene-A3216_03715;Name=A3216_03715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03715;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 34951 35699 . + 0 ID=cds-A3216_03715;Parent=gene-A3216_03715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003917701.1;locus_tag=A3216_03715;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 36555 38131 . - . ID=gene-A3216_03720;Name=A3216_03720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03720;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 36555 38131 . - 0 ID=cds-A3216_03720;Parent=gene-A3216_03720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003901014.1;locus_tag=A3216_03720;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 38236 38687 . + . ID=gene-A3216_03725;Name=A3216_03725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03725;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 38236 38687 . + 0 ID=cds-A3216_03725;Parent=gene-A3216_03725;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171405.1;locus_tag=A3216_03725;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 38691 40097 . - . ID=gene-A3216_03730;Name=A3216_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03730 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 38691 40097 . - 0 ID=cds-OAX71772.1;Parent=gene-A3216_03730;Dbxref=NCBI_GP:OAX71772.1;Name=OAX71772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33040.1;locus_tag=A3216_03730;product=amidase;protein_id=OAX71772.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 40133 40963 . - . ID=gene-A3216_03735;Name=A3216_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03735 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 40133 40963 . - 0 ID=cds-OAX71773.1;Parent=gene-A3216_03735;Dbxref=NCBI_GP:OAX71773.1;Name=OAX71773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014213980.1;locus_tag=A3216_03735;product=translation elongation factor Ts;protein_id=OAX71773.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 40965 41798 . - . ID=gene-A3216_03740;Name=A3216_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03740 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 40965 41798 . - 0 ID=cds-OAX71774.1;Parent=gene-A3216_03740;Dbxref=NCBI_GP:OAX71774.1;Name=OAX71774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33038.1;locus_tag=A3216_03740;product=30S ribosomal protein S2;protein_id=OAX71774.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 42622 43515 . - . ID=gene-A3216_03745;Name=A3216_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03745 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 42622 43515 . - 0 ID=cds-OAX71805.1;Parent=gene-A3216_03745;Dbxref=NCBI_GP:OAX71805.1;Name=OAX71805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBU0.1;locus_tag=A3216_03745;product=recombinase XerC;protein_id=OAX71805.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 43596 43829 . - . ID=gene-A3216_03750;Name=A3216_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03750 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 43596 43829 . - 0 ID=cds-OAX71775.1;Parent=gene-A3216_03750;Dbxref=NCBI_GP:OAX71775.1;Name=OAX71775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03750;product=hypothetical protein;protein_id=OAX71775.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 44121 44360 . - . ID=gene-A3216_03755;Name=A3216_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03755 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 44121 44360 . - 0 ID=cds-OAX71776.1;Parent=gene-A3216_03755;Dbxref=NCBI_GP:OAX71776.1;Name=OAX71776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03755;product=hypothetical protein;protein_id=OAX71776.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 44532 44897 . - . ID=gene-A3216_03760;Name=A3216_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03760 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 44532 44897 . - 0 ID=cds-OAX71777.1;Parent=gene-A3216_03760;Dbxref=NCBI_GP:OAX71777.1;Name=OAX71777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908424.1;locus_tag=A3216_03760;product=hypothetical protein;protein_id=OAX71777.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 45581 45901 . - . ID=gene-A3216_03765;Name=A3216_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03765 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 45581 45901 . - 0 ID=cds-OAX71778.1;Parent=gene-A3216_03765;Dbxref=NCBI_GP:OAX71778.1;Name=OAX71778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908425.1;locus_tag=A3216_03765;product=hypothetical protein;protein_id=OAX71778.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 46154 46414 . - . ID=gene-A3216_03770;Name=A3216_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03770 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 46154 46414 . - 0 ID=cds-OAX71806.1;Parent=gene-A3216_03770;Dbxref=NCBI_GP:OAX71806.1;Name=OAX71806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908426.1;locus_tag=A3216_03770;product=hypothetical protein;protein_id=OAX71806.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 46624 47013 . - . ID=gene-A3216_03775;Name=A3216_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03775 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 46624 47013 . - 0 ID=cds-OAX71779.1;Parent=gene-A3216_03775;Dbxref=NCBI_GP:OAX71779.1;Name=OAX71779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908427.1;locus_tag=A3216_03775;product=hypothetical protein;protein_id=OAX71779.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 47054 47275 . - . ID=gene-A3216_03780;Name=A3216_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03780 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 47054 47275 . - 0 ID=cds-OAX71780.1;Parent=gene-A3216_03780;Dbxref=NCBI_GP:OAX71780.1;Name=OAX71780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03780;product=hypothetical protein;protein_id=OAX71780.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 48984 49184 . + . ID=gene-A3216_03785;Name=A3216_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03785 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 48984 49184 . + 0 ID=cds-OAX71781.1;Parent=gene-A3216_03785;Dbxref=NCBI_GP:OAX71781.1;Name=OAX71781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908428.1;locus_tag=A3216_03785;product=hypothetical protein;protein_id=OAX71781.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 50157 50459 . - . ID=gene-A3216_03790;Name=A3216_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03790 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 50157 50459 . - 0 ID=cds-OAX71782.1;Parent=gene-A3216_03790;Dbxref=NCBI_GP:OAX71782.1;Name=OAX71782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03790;product=hypothetical protein;protein_id=OAX71782.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 50478 50768 . - . ID=gene-A3216_03795;Name=A3216_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03795 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 50478 50768 . - 0 ID=cds-OAX71783.1;Parent=gene-A3216_03795;Dbxref=NCBI_GP:OAX71783.1;Name=OAX71783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33024.2;locus_tag=A3216_03795;product=hypothetical protein;protein_id=OAX71783.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 50907 51441 . - . ID=gene-A3216_03800;Name=A3216_03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03800;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 50907 51441 . - 0 ID=cds-A3216_03800;Parent=gene-A3216_03800;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015303625.1;locus_tag=A3216_03800;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 52017 52238 . - . ID=gene-A3216_03805;Name=A3216_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03805 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 52017 52238 . - 0 ID=cds-OAX71784.1;Parent=gene-A3216_03805;Dbxref=NCBI_GP:OAX71784.1;Name=OAX71784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03805;product=hypothetical protein;protein_id=OAX71784.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 52582 52779 . + . ID=gene-A3216_03810;Name=A3216_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03810 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 52582 52779 . + 0 ID=cds-OAX71785.1;Parent=gene-A3216_03810;Dbxref=NCBI_GP:OAX71785.1;Name=OAX71785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03810;product=hypothetical protein;protein_id=OAX71785.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 52798 53103 . - . ID=gene-A3216_03815;Name=A3216_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03815 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 52798 53103 . - 0 ID=cds-OAX71786.1;Parent=gene-A3216_03815;Dbxref=NCBI_GP:OAX71786.1;Name=OAX71786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005056986.1;locus_tag=A3216_03815;product=hypothetical protein;protein_id=OAX71786.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 53216 53938 . - . ID=gene-A3216_03820;Name=A3216_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03820 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 53216 53938 . - 0 ID=cds-OAX71787.1;Parent=gene-A3216_03820;Dbxref=NCBI_GP:OAX71787.1;Name=OAX71787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33022.1;locus_tag=A3216_03820;product=ribonuclease HII;protein_id=OAX71787.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 53941 54810 . - . ID=gene-A3216_03825;Name=A3216_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03825 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 53941 54810 . - 0 ID=cds-OAX71788.1;Parent=gene-A3216_03825;Dbxref=NCBI_GP:OAX71788.1;Name=OAX71788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33021.1;locus_tag=A3216_03825;product=signal peptidase I;protein_id=OAX71788.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 54890 55231 . - . ID=gene-A3216_03830;Name=A3216_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03830 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 54890 55231 . - 0 ID=cds-OAX71789.1;Parent=gene-A3216_03830;Dbxref=NCBI_GP:OAX71789.1;Name=OAX71789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009678849.1;locus_tag=A3216_03830;product=50S ribosomal protein L19;protein_id=OAX71789.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 55765 55995 . + . ID=gene-A3216_03835;Name=A3216_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03835 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 55765 55995 . + 0 ID=cds-OAX71790.1;Parent=gene-A3216_03835;Dbxref=NCBI_GP:OAX71790.1;Name=OAX71790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03835;product=hypothetical protein;protein_id=OAX71790.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 56050 56388 . + . ID=gene-A3216_03840;Name=A3216_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03840 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 56050 56388 . + 0 ID=cds-OAX71791.1;Parent=gene-A3216_03840;Dbxref=NCBI_GP:OAX71791.1;Name=OAX71791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03840;product=hypothetical protein;protein_id=OAX71791.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 56517 57233 . - . ID=gene-A3216_03845;Name=A3216_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03845 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 56517 57233 . - 0 ID=cds-OAX71792.1;Parent=gene-A3216_03845;Dbxref=NCBI_GP:OAX71792.1;Name=OAX71792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33017.1;locus_tag=A3216_03845;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=OAX71792.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 57230 57748 . - . ID=gene-A3216_03850;Name=A3216_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03850 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 57230 57748 . - 0 ID=cds-OAX71807.1;Parent=gene-A3216_03850;Dbxref=NCBI_GP:OAX71807.1;Name=OAX71807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008258891.1;locus_tag=A3216_03850;product=ribosome maturation factor RimM;protein_id=OAX71807.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 57774 58016 . - . ID=gene-A3216_03855;Name=A3216_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03855 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 57774 58016 . - 0 ID=cds-OAX71793.1;Parent=gene-A3216_03855;Dbxref=NCBI_GP:OAX71793.1;Name=OAX71793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006242163.1;locus_tag=A3216_03855;product=hypothetical protein;protein_id=OAX71793.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 58041 58523 . - . ID=gene-A3216_03860;Name=A3216_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03860 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 58041 58523 . - 0 ID=cds-OAX71808.1;Parent=gene-A3216_03860;Dbxref=NCBI_GP:OAX71808.1;Name=OAX71808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33014.1;locus_tag=A3216_03860;product=30S ribosomal protein S16;protein_id=OAX71808.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 59184 59570 . + . ID=gene-A3216_03865;Name=A3216_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03865 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 59184 59570 . + 0 ID=cds-OAX71794.1;Parent=gene-A3216_03865;Dbxref=NCBI_GP:OAX71794.1;Name=OAX71794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03865;product=hypothetical protein;protein_id=OAX71794.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 59731 59910 . + . ID=gene-A3216_03870;Name=A3216_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03870 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 59731 59910 . + 0 ID=cds-OAX71795.1;Parent=gene-A3216_03870;Dbxref=NCBI_GP:OAX71795.1;Name=OAX71795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03870;product=hypothetical protein;protein_id=OAX71795.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 60518 61565 . - . ID=gene-A3216_03875;Name=A3216_03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03875;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 60518 61565 . - 0 ID=cds-A3216_03875;Parent=gene-A3216_03875;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015303635.1;locus_tag=A3216_03875;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 61579 63144 . - . ID=gene-A3216_03880;Name=A3216_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03880 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 61579 63144 . - 0 ID=cds-OAX71796.1;Parent=gene-A3216_03880;Dbxref=NCBI_GP:OAX71796.1;Name=OAX71796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33013.1;locus_tag=A3216_03880;product=signal recognition particle protein;protein_id=OAX71796.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 63283 65253 . + . ID=gene-A3216_03885;Name=A3216_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03885 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 63283 65253 . + 0 ID=cds-OAX71797.1;Parent=gene-A3216_03885;Dbxref=NCBI_GP:OAX71797.1;Name=OAX71797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33012.1;locus_tag=A3216_03885;product=molecular chaperone HtpG;protein_id=OAX71797.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 65415 67205 . + . ID=gene-A3216_03890;Name=A3216_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03890 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 65415 67205 . + 0 ID=cds-OAX71798.1;Parent=gene-A3216_03890;Dbxref=NCBI_GP:OAX71798.1;Name=OAX71798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33011.1;locus_tag=A3216_03890;product=hypothetical protein;protein_id=OAX71798.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 67226 67432 . - . ID=gene-A3216_03895;Name=A3216_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03895 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 67226 67432 . - 0 ID=cds-OAX71799.1;Parent=gene-A3216_03895;Dbxref=NCBI_GP:OAX71799.1;Name=OAX71799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03895;product=hypothetical protein;protein_id=OAX71799.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 67731 67943 . - . ID=gene-A3216_03900;Name=A3216_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03900 GCA_001648835.1|LVXE01000006.1 GeneMarkS+ CDS 67731 67943 . - 0 ID=cds-OAX71800.1;Parent=gene-A3216_03900;Dbxref=NCBI_GP:OAX71800.1;Name=OAX71800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_03900;product=hypothetical protein;protein_id=OAX71800.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 68157 69510 . - . ID=gene-A3216_03905;Name=A3216_03905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03905;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 68157 69510 . - 0 ID=cds-A3216_03905;Parent=gene-A3216_03905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009938589.1;locus_tag=A3216_03905;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 69637 69974 . - . ID=gene-A3216_03910;Name=A3216_03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03910;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 69637 69974 . - 0 ID=cds-A3216_03910;Parent=gene-A3216_03910;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA%3B frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018600748.1;locus_tag=A3216_03910;product=transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank pseudogene 69971 71063 . - . ID=gene-A3216_03915;Name=A3216_03915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_03915;pseudo=true GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 69971 71063 . - 0 ID=cds-A3216_03915;Parent=gene-A3216_03915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019695708.1;locus_tag=A3216_03915;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 71226 72518 . - . ID=gene-A3216_03920;Name=A3216_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03920 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 71226 72518 . - 0 ID=cds-OAX71801.1;Parent=gene-A3216_03920;Dbxref=NCBI_GP:OAX71801.1;Name=OAX71801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33010.1;locus_tag=A3216_03920;product=signal recognition particle-docking protein FtsY;protein_id=OAX71801.1;transl_table=11 GCA_001648835.1|LVXE01000006.1 Genbank gene 72632 76243 . - . ID=gene-A3216_03925;Name=A3216_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03925 GCA_001648835.1|LVXE01000006.1 Protein Homology CDS 72632 76243 . - 0 ID=cds-OAX71809.1;Parent=gene-A3216_03925;Dbxref=NCBI_GP:OAX71809.1;Name=OAX71809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CBT5.1;locus_tag=A3216_03925;product=chromosome segregation protein SMC;protein_id=OAX71809.1;transl_table=11 ##sequence-region LVXE01000060.1 1 17285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000060.1 Genbank region 1 17285 . + . ID=LVXE01000060.1:1..17285;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000060.1 Genbank gene 328 552 . - . ID=gene-A3216_12230;Name=A3216_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12230 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 328 552 . - 0 ID=cds-OAX70379.1;Parent=gene-A3216_12230;Dbxref=NCBI_GP:OAX70379.1;Name=OAX70379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12230;product=hypothetical protein;protein_id=OAX70379.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 776 1087 . - . ID=gene-A3216_12235;Name=A3216_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12235 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 776 1087 . - 0 ID=cds-OAX70380.1;Parent=gene-A3216_12235;Dbxref=NCBI_GP:OAX70380.1;Name=OAX70380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12235;product=hypothetical protein;protein_id=OAX70380.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 2185 2502 . + . ID=gene-A3216_12240;Name=A3216_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12240 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 2185 2502 . + 0 ID=cds-OAX70381.1;Parent=gene-A3216_12240;Dbxref=NCBI_GP:OAX70381.1;Name=OAX70381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12240;product=hypothetical protein;protein_id=OAX70381.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 4243 4947 . + . ID=gene-A3216_12245;Name=A3216_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12245 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 4243 4947 . + 0 ID=cds-OAX70382.1;Parent=gene-A3216_12245;Dbxref=NCBI_GP:OAX70382.1;Name=OAX70382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907663.1;locus_tag=A3216_12245;product=hypothetical protein;protein_id=OAX70382.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 5047 5331 . - . ID=gene-A3216_12250;Name=A3216_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12250 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 5047 5331 . - 0 ID=cds-OAX70383.1;Parent=gene-A3216_12250;Dbxref=NCBI_GP:OAX70383.1;Name=OAX70383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12250;product=hypothetical protein;protein_id=OAX70383.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 5751 5942 . + . ID=gene-A3216_12255;Name=A3216_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12255 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 5751 5942 . + 0 ID=cds-OAX70384.1;Parent=gene-A3216_12255;Dbxref=NCBI_GP:OAX70384.1;Name=OAX70384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12255;product=hypothetical protein;protein_id=OAX70384.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 6184 6399 . + . ID=gene-A3216_12260;Name=A3216_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12260 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 6184 6399 . + 0 ID=cds-OAX70385.1;Parent=gene-A3216_12260;Dbxref=NCBI_GP:OAX70385.1;Name=OAX70385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12260;product=hypothetical protein;protein_id=OAX70385.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 6396 6632 . - . ID=gene-A3216_12265;Name=A3216_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12265 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 6396 6632 . - 0 ID=cds-OAX70386.1;Parent=gene-A3216_12265;Dbxref=NCBI_GP:OAX70386.1;Name=OAX70386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12265;product=hypothetical protein;protein_id=OAX70386.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 6832 7734 . - . ID=gene-A3216_12270;Name=A3216_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12270 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 6832 7734 . - 0 ID=cds-OAX70387.1;Parent=gene-A3216_12270;Dbxref=NCBI_GP:OAX70387.1;Name=OAX70387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBM2.1;locus_tag=A3216_12270;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=OAX70387.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 7731 8462 . - . ID=gene-A3216_12275;Name=A3216_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12275 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 7731 8462 . - 0 ID=cds-OAX70388.1;Parent=gene-A3216_12275;Dbxref=NCBI_GP:OAX70388.1;Name=OAX70388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCW9.1;locus_tag=A3216_12275;product=phosphatidylserine decarboxylase;protein_id=OAX70388.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank pseudogene 8500 9781 . - . ID=gene-A3216_12280;Name=A3216_12280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12280;pseudo=true GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 8500 9781 . - 0 ID=cds-A3216_12280;Parent=gene-A3216_12280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013470573.1;locus_tag=A3216_12280;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 10557 11654 . - . ID=gene-A3216_12285;Name=A3216_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12285 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 10557 11654 . - 0 ID=cds-OAX70389.1;Parent=gene-A3216_12285;Dbxref=NCBI_GP:OAX70389.1;Name=OAX70389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007776670.1;locus_tag=A3216_12285;product=esterase;protein_id=OAX70389.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 12279 12677 . + . ID=gene-A3216_12290;Name=A3216_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12290 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 12279 12677 . + 0 ID=cds-OAX70390.1;Parent=gene-A3216_12290;Dbxref=NCBI_GP:OAX70390.1;Name=OAX70390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12290;product=hypothetical protein;protein_id=OAX70390.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 12734 12934 . + . ID=gene-A3216_12295;Name=A3216_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12295 GCA_001648835.1|LVXE01000060.1 GeneMarkS+ CDS 12734 12934 . + 0 ID=cds-OAX70391.1;Parent=gene-A3216_12295;Dbxref=NCBI_GP:OAX70391.1;Name=OAX70391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12295;product=hypothetical protein;protein_id=OAX70391.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 13484 14398 . - . ID=gene-A3216_12300;Name=A3216_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12300 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 13484 14398 . - 0 ID=cds-OAX70392.1;Parent=gene-A3216_12300;Dbxref=NCBI_GP:OAX70392.1;Name=OAX70392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907667.1;locus_tag=A3216_12300;product=short-chain dehydrogenase;protein_id=OAX70392.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 14493 15095 . + . ID=gene-A3216_12305;Name=A3216_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12305 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 14493 15095 . + 0 ID=cds-OAX70393.1;Parent=gene-A3216_12305;Dbxref=NCBI_GP:OAX70393.1;Name=OAX70393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907668.1;locus_tag=A3216_12305;product=TetR family transcriptional regulator;protein_id=OAX70393.1;transl_table=11 GCA_001648835.1|LVXE01000060.1 Genbank gene 15304 16929 . + . ID=gene-A3216_12310;Name=A3216_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12310 GCA_001648835.1|LVXE01000060.1 Protein Homology CDS 15304 16929 . + 0 ID=cds-OAX70394.1;Parent=gene-A3216_12310;Dbxref=NCBI_GP:OAX70394.1;Name=OAX70394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008713461.1;locus_tag=A3216_12310;product=chaperonin GroL;protein_id=OAX70394.1;transl_table=11 ##sequence-region LVXE01000061.1 1 24085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000061.1 Genbank region 1 24085 . + . ID=LVXE01000061.1:1..24085;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000061.1 Genbank gene 241 612 . - . ID=gene-A3216_12315;Name=A3216_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12315 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 241 612 . - 0 ID=cds-OAX70353.1;Parent=gene-A3216_12315;Dbxref=NCBI_GP:OAX70353.1;Name=OAX70353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12315;product=hypothetical protein;protein_id=OAX70353.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 1272 1640 . + . ID=gene-A3216_12320;Name=A3216_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12320 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 1272 1640 . + 0 ID=cds-OAX70354.1;Parent=gene-A3216_12320;Dbxref=NCBI_GP:OAX70354.1;Name=OAX70354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A8M519.1;locus_tag=A3216_12320;product=50S ribosomal protein L14;protein_id=OAX70354.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 1641 1958 . + . ID=gene-A3216_12325;Name=A3216_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12325 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 1641 1958 . + 0 ID=cds-OAX70355.1;Parent=gene-A3216_12325;Dbxref=NCBI_GP:OAX70355.1;Name=OAX70355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003938081.1;locus_tag=A3216_12325;product=50S ribosomal protein L24;protein_id=OAX70355.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 1959 2522 . + . ID=gene-A3216_12330;Name=A3216_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12330 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 1959 2522 . + 0 ID=cds-OAX70356.1;Parent=gene-A3216_12330;Dbxref=NCBI_GP:OAX70356.1;Name=OAX70356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019510999.1;locus_tag=A3216_12330;product=50S ribosomal protein L5;protein_id=OAX70356.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 2528 2713 . + . ID=gene-A3216_12335;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=A3216_12335 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 2528 2713 . + 0 ID=cds-OAX70357.1;Parent=gene-A3216_12335;Dbxref=NCBI_GP:OAX70357.1;Name=OAX70357.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:SwissProt:P66418.1;locus_tag=A3216_12335;product=30S ribosomal protein S14;protein_id=OAX70357.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 2796 3194 . + . ID=gene-A3216_12340;Name=A3216_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12340 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 2796 3194 . + 0 ID=cds-OAX70358.1;Parent=gene-A3216_12340;Dbxref=NCBI_GP:OAX70358.1;Name=OAX70358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008375945.1;locus_tag=A3216_12340;product=30S ribosomal protein S8;protein_id=OAX70358.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 3220 3759 . + . ID=gene-A3216_12345;Name=A3216_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12345 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 3220 3759 . + 0 ID=cds-OAX70359.1;Parent=gene-A3216_12345;Dbxref=NCBI_GP:OAX70359.1;Name=OAX70359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006245132.1;locus_tag=A3216_12345;product=50S ribosomal protein L6;protein_id=OAX70359.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 3762 4130 . + . ID=gene-A3216_12350;Name=A3216_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12350 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 3762 4130 . + 0 ID=cds-OAX70360.1;Parent=gene-A3216_12350;Dbxref=NCBI_GP:OAX70360.1;Name=OAX70360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008260609.1;locus_tag=A3216_12350;product=50S ribosomal protein L18;protein_id=OAX70360.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 4159 4812 . + . ID=gene-A3216_12355;Name=A3216_12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12355 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 4159 4812 . + 0 ID=cds-OAX70361.1;Parent=gene-A3216_12355;Dbxref=NCBI_GP:OAX70361.1;Name=OAX70361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33000.1;locus_tag=A3216_12355;product=30S ribosomal protein S5;protein_id=OAX70361.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 4815 5030 . + . ID=gene-A3216_12360;Name=A3216_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12360 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 4815 5030 . + 0 ID=cds-OAX70362.1;Parent=gene-A3216_12360;Dbxref=NCBI_GP:OAX70362.1;Name=OAX70362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O33001.1;locus_tag=A3216_12360;product=50S ribosomal protein L30;protein_id=OAX70362.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 5031 5471 . + . ID=gene-A3216_12365;Name=A3216_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12365 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 5031 5471 . + 0 ID=cds-OAX70363.1;Parent=gene-A3216_12365;Dbxref=NCBI_GP:OAX70363.1;Name=OAX70363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HCU0.1;locus_tag=A3216_12365;product=50S ribosomal protein L15;protein_id=OAX70363.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank pseudogene 5707 7508 . + . ID=gene-A3216_12370;Name=A3216_12370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12370;pseudo=true GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 5707 7508 . + 0 ID=cds-A3216_12370;Parent=gene-A3216_12370;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908566.1;locus_tag=A3216_12370;product=signal peptide peptidase SppA;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 8089 8355 . - . ID=gene-A3216_12375;Name=A3216_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12375 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 8089 8355 . - 0 ID=cds-OAX70364.1;Parent=gene-A3216_12375;Dbxref=NCBI_GP:OAX70364.1;Name=OAX70364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12375;product=hypothetical protein;protein_id=OAX70364.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 8607 8876 . - . ID=gene-A3216_12380;Name=A3216_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12380 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 8607 8876 . - 0 ID=cds-OAX70365.1;Parent=gene-A3216_12380;Dbxref=NCBI_GP:OAX70365.1;Name=OAX70365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12380;product=hypothetical protein;protein_id=OAX70365.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 8991 9200 . - . ID=gene-A3216_12385;Name=A3216_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12385 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 8991 9200 . - 0 ID=cds-OAX70366.1;Parent=gene-A3216_12385;Dbxref=NCBI_GP:OAX70366.1;Name=OAX70366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12385;product=hypothetical protein;protein_id=OAX70366.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 9508 9864 . + . ID=gene-A3216_12390;Name=A3216_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12390 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 9508 9864 . + 0 ID=cds-OAX70367.1;Parent=gene-A3216_12390;Dbxref=NCBI_GP:OAX70367.1;Name=OAX70367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12390;product=hypothetical protein;protein_id=OAX70367.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 10163 10435 . + . ID=gene-A3216_12395;Name=A3216_12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12395 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 10163 10435 . + 0 ID=cds-OAX70368.1;Parent=gene-A3216_12395;Dbxref=NCBI_GP:OAX70368.1;Name=OAX70368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12395;product=hypothetical protein;protein_id=OAX70368.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 10545 11228 . + . ID=gene-A3216_12400;Name=A3216_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12400 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 10545 11228 . + 0 ID=cds-OAX70369.1;Parent=gene-A3216_12400;Dbxref=NCBI_GP:OAX70369.1;Name=OAX70369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908565.1;locus_tag=A3216_12400;product=acetyltransferase;protein_id=OAX70369.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 11373 11633 . - . ID=gene-A3216_12405;Name=A3216_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12405 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 11373 11633 . - 0 ID=cds-OAX70370.1;Parent=gene-A3216_12405;Dbxref=NCBI_GP:OAX70370.1;Name=OAX70370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12405;product=hypothetical protein;protein_id=OAX70370.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 12372 13688 . + . ID=gene-A3216_12410;Name=A3216_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12410 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 12372 13688 . + 0 ID=cds-OAX70371.1;Parent=gene-A3216_12410;Dbxref=NCBI_GP:OAX70371.1;Name=OAX70371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003919325.1;locus_tag=A3216_12410;product=preprotein translocase subunit SecY;protein_id=OAX70371.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 13685 14230 . + . ID=gene-A3216_12415;Name=A3216_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12415 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 13685 14230 . + 0 ID=cds-OAX70372.1;Parent=gene-A3216_12415;Dbxref=NCBI_GP:OAX70372.1;Name=OAX70372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008260542.1;locus_tag=A3216_12415;product=adenylate kinase;protein_id=OAX70372.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 14242 15042 . + . ID=gene-A3216_12420;Name=A3216_12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12420 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 14242 15042 . + 0 ID=cds-OAX70373.1;Parent=gene-A3216_12420;Dbxref=NCBI_GP:OAX70373.1;Name=OAX70373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908562.1;locus_tag=A3216_12420;product=type I methionyl aminopeptidase;protein_id=OAX70373.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 16523 16741 . - . ID=gene-A3216_12425;Name=A3216_12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12425 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 16523 16741 . - 0 ID=cds-OAX70374.1;Parent=gene-A3216_12425;Dbxref=NCBI_GP:OAX70374.1;Name=OAX70374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12425;product=hypothetical protein;protein_id=OAX70374.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 17576 17908 . + . ID=gene-A3216_12430;Name=A3216_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12430 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 17576 17908 . + 0 ID=cds-OAX70375.1;Parent=gene-A3216_12430;Dbxref=NCBI_GP:OAX70375.1;Name=OAX70375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12430;product=hypothetical protein;protein_id=OAX70375.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 19254 19631 . - . ID=gene-A3216_12435;Name=A3216_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12435 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 19254 19631 . - 0 ID=cds-OAX70378.1;Parent=gene-A3216_12435;Dbxref=NCBI_GP:OAX70378.1;Name=OAX70378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908561.1;locus_tag=A3216_12435;product=hypothetical protein;protein_id=OAX70378.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 cmsearch binding_site 19981 20161 . + . ID=id-LVXE01000061.1:19981..20161;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001648835.1|LVXE01000061.1 Genbank gene 20278 21996 . + . ID=gene-A3216_12440;Name=A3216_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12440 GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 20278 21996 . + 0 ID=cds-OAX70376.1;Parent=gene-A3216_12440;Dbxref=NCBI_GP:OAX70376.1;Name=OAX70376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908560.1;locus_tag=A3216_12440;product=hypothetical protein;protein_id=OAX70376.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank gene 22322 22543 . + . ID=gene-A3216_12445;Name=A3216_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12445 GCA_001648835.1|LVXE01000061.1 GeneMarkS+ CDS 22322 22543 . + 0 ID=cds-OAX70377.1;Parent=gene-A3216_12445;Dbxref=NCBI_GP:OAX70377.1;Name=OAX70377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12445;product=hypothetical protein;protein_id=OAX70377.1;transl_table=11 GCA_001648835.1|LVXE01000061.1 Genbank pseudogene 22552 22983 . + . ID=gene-A3216_12450;Name=A3216_12450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12450;pseudo=true GCA_001648835.1|LVXE01000061.1 Protein Homology CDS 22552 22983 . + 0 ID=cds-A3216_12450;Parent=gene-A3216_12450;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003907236.1;locus_tag=A3216_12450;product=adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase;pseudo=true;transl_table=11 ##sequence-region LVXE01000062.1 1 31224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000062.1 Genbank region 1 31224 . + . ID=LVXE01000062.1:1..31224;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000062.1 Genbank gene 1388 1639 . - . ID=gene-A3216_12455;Name=A3216_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12455 GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 1388 1639 . - 0 ID=cds-OAX70335.1;Parent=gene-A3216_12455;Dbxref=NCBI_GP:OAX70335.1;Name=OAX70335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12455;product=hypothetical protein;protein_id=OAX70335.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 2101 3120 . - . ID=gene-A3216_12460;Name=A3216_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12460 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 2101 3120 . - 0 ID=cds-OAX70336.1;Parent=gene-A3216_12460;Dbxref=NCBI_GP:OAX70336.1;Name=OAX70336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014386003.1;locus_tag=A3216_12460;product=acyl dehydratase;protein_id=OAX70336.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 4676 4873 . - . ID=gene-A3216_12465;Name=A3216_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12465 GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 4676 4873 . - 0 ID=cds-OAX70337.1;Parent=gene-A3216_12465;Dbxref=NCBI_GP:OAX70337.1;Name=OAX70337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12465;product=hypothetical protein;protein_id=OAX70337.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 6278 8107 . - . ID=gene-A3216_12470;Name=A3216_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12470 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 6278 8107 . - 0 ID=cds-OAX70338.1;Parent=gene-A3216_12470;Dbxref=NCBI_GP:OAX70338.1;Name=OAX70338.1;Note=catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014209960.1;locus_tag=A3216_12470;product=phosphoenolpyruvate carboxykinase;protein_id=OAX70338.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 8296 8487 . - . ID=gene-A3216_12475;Name=A3216_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12475 GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 8296 8487 . - 0 ID=cds-OAX70339.1;Parent=gene-A3216_12475;Dbxref=NCBI_GP:OAX70339.1;Name=OAX70339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12475;product=hypothetical protein;protein_id=OAX70339.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 10113 10805 . + . ID=gene-A3216_12480;Name=A3216_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12480 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 10113 10805 . + 0 ID=cds-OAX70340.1;Parent=gene-A3216_12480;Dbxref=NCBI_GP:OAX70340.1;Name=OAX70340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCZ9.1;locus_tag=A3216_12480;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=OAX70340.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 11014 11601 . + . ID=gene-A3216_12485;Name=A3216_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12485 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 11014 11601 . + 0 ID=cds-OAX70350.1;Parent=gene-A3216_12485;Dbxref=NCBI_GP:OAX70350.1;Name=OAX70350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908998.1;locus_tag=A3216_12485;product=NYN domain-containing protein;protein_id=OAX70350.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 11681 14503 . + . ID=gene-A3216_12490;Name=A3216_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12490 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 11681 14503 . + 0 ID=cds-OAX70341.1;Parent=gene-A3216_12490;Dbxref=NCBI_GP:OAX70341.1;Name=OAX70341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O06081.1;locus_tag=A3216_12490;product=hypothetical protein;protein_id=OAX70341.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank pseudogene 14520 15629 . - . ID=gene-A3216_12495;Name=A3216_12495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12495;pseudo=true GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 14520 15629 . - 0 ID=cds-A3216_12495;Parent=gene-A3216_12495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007769115.1;locus_tag=A3216_12495;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 15844 16902 . + . ID=gene-A3216_12500;Name=A3216_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12500 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 15844 16902 . + 0 ID=cds-OAX70351.1;Parent=gene-A3216_12500;Dbxref=NCBI_GP:OAX70351.1;Name=OAX70351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908996.1;locus_tag=A3216_12500;product=hypothetical protein;protein_id=OAX70351.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 17516 20560 . + . ID=gene-A3216_12505;Name=A3216_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12505 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 17516 20560 . + 0 ID=cds-OAX70342.1;Parent=gene-A3216_12505;Dbxref=NCBI_GP:OAX70342.1;Name=OAX70342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381436.1;locus_tag=A3216_12505;product=hypothetical protein;protein_id=OAX70342.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 20557 21069 . + . ID=gene-A3216_12510;Name=A3216_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12510 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 20557 21069 . + 0 ID=cds-OAX70343.1;Parent=gene-A3216_12510;Dbxref=NCBI_GP:OAX70343.1;Name=OAX70343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908994.1;locus_tag=A3216_12510;product=hypothetical protein;protein_id=OAX70343.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 21148 21837 . - . ID=gene-A3216_12515;Name=A3216_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12515 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 21148 21837 . - 0 ID=cds-OAX70344.1;Parent=gene-A3216_12515;Dbxref=NCBI_GP:OAX70344.1;Name=OAX70344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908993.1;locus_tag=A3216_12515;product=hypothetical protein;protein_id=OAX70344.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 21834 22472 . - . ID=gene-A3216_12520;Name=A3216_12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12520 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 21834 22472 . - 0 ID=cds-OAX70345.1;Parent=gene-A3216_12520;Dbxref=NCBI_GP:OAX70345.1;Name=OAX70345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739301.1;locus_tag=A3216_12520;product=hypothetical protein;protein_id=OAX70345.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 22568 24571 . + . ID=gene-A3216_12525;Name=A3216_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12525 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 22568 24571 . + 0 ID=cds-OAX70346.1;Parent=gene-A3216_12525;Dbxref=NCBI_GP:OAX70346.1;Name=OAX70346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908991.1;locus_tag=A3216_12525;product=peptidase M13;protein_id=OAX70346.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 27017 27301 . - . ID=gene-A3216_12530;Name=A3216_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12530 GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 27017 27301 . - 0 ID=cds-OAX70347.1;Parent=gene-A3216_12530;Dbxref=NCBI_GP:OAX70347.1;Name=OAX70347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12530;product=hypothetical protein;protein_id=OAX70347.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 27695 27928 . - . ID=gene-A3216_12535;Name=A3216_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12535 GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 27695 27928 . - 0 ID=cds-OAX70348.1;Parent=gene-A3216_12535;Dbxref=NCBI_GP:OAX70348.1;Name=OAX70348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12535;product=hypothetical protein;protein_id=OAX70348.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 28147 28461 . - . ID=gene-A3216_12540;Name=A3216_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12540 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 28147 28461 . - 0 ID=cds-OAX70352.1;Parent=gene-A3216_12540;Dbxref=NCBI_GP:OAX70352.1;Name=OAX70352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011891484.1;locus_tag=A3216_12540;product=CopY family transcriptional regulator;protein_id=OAX70352.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank gene 28618 30312 . + . ID=gene-A3216_12545;Name=A3216_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12545 GCA_001648835.1|LVXE01000062.1 Protein Homology CDS 28618 30312 . + 0 ID=cds-OAX70349.1;Parent=gene-A3216_12545;Dbxref=NCBI_GP:OAX70349.1;Name=OAX70349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O06069.1;locus_tag=A3216_12545;product=dihydroxy-acid dehydratase;protein_id=OAX70349.1;transl_table=11 GCA_001648835.1|LVXE01000062.1 Genbank pseudogene 30670 31224 . + . ID=gene-A3216_12550;Name=A3216_12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12550;pseudo=true GCA_001648835.1|LVXE01000062.1 GeneMarkS+ CDS 30670 31224 . + 0 ID=cds-A3216_12550;Parent=gene-A3216_12550;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12550;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000063.1 1 17191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000063.1 Genbank region 1 17191 . + . ID=LVXE01000063.1:1..17191;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000063.1 Genbank gene 120 380 . + . ID=gene-A3216_12555;Name=A3216_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12555 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 120 380 . + 0 ID=cds-OAX70321.1;Parent=gene-A3216_12555;Dbxref=NCBI_GP:OAX70321.1;Name=OAX70321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12555;product=hypothetical protein;protein_id=OAX70321.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 957 1169 . - . ID=gene-A3216_12560;Name=A3216_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12560 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 957 1169 . - 0 ID=cds-OAX70322.1;Parent=gene-A3216_12560;Dbxref=NCBI_GP:OAX70322.1;Name=OAX70322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12560;product=hypothetical protein;protein_id=OAX70322.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 1518 1727 . - . ID=gene-A3216_12565;Name=A3216_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12565 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 1518 1727 . - 0 ID=cds-OAX70323.1;Parent=gene-A3216_12565;Dbxref=NCBI_GP:OAX70323.1;Name=OAX70323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12565;product=hypothetical protein;protein_id=OAX70323.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank pseudogene 2460 3640 . + . ID=gene-A3216_12570;Name=rocD;gbkey=Gene;gene=rocD;gene_biotype=pseudogene;locus_tag=A3216_12570;pseudo=true GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 2460 3640 . + 0 ID=cds-A3216_12570;Parent=gene-A3216_12570;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rocD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010949476.1;locus_tag=A3216_12570;product=ornithine--oxo-acid transaminase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 4134 4316 . + . ID=gene-A3216_12575;Name=A3216_12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12575 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 4134 4316 . + 0 ID=cds-OAX70324.1;Parent=gene-A3216_12575;Dbxref=NCBI_GP:OAX70324.1;Name=OAX70324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12575;product=hypothetical protein;protein_id=OAX70324.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 4319 4591 . + . ID=gene-A3216_12580;Name=A3216_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12580 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 4319 4591 . + 0 ID=cds-OAX70325.1;Parent=gene-A3216_12580;Dbxref=NCBI_GP:OAX70325.1;Name=OAX70325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12580;product=hypothetical protein;protein_id=OAX70325.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank pseudogene 5017 5851 . + . ID=gene-A3216_12585;Name=A3216_12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12585;pseudo=true GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 5017 5851 . + 0 ID=cds-A3216_12585;Parent=gene-A3216_12585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395244.1;locus_tag=A3216_12585;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 5848 7188 . - . ID=gene-A3216_12590;Name=A3216_12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12590 GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 5848 7188 . - 0 ID=cds-OAX70326.1;Parent=gene-A3216_12590;Dbxref=NCBI_GP:OAX70326.1;Name=OAX70326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954609.1;locus_tag=A3216_12590;product=sugar ABC transporter substrate-binding protein;protein_id=OAX70326.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 7280 8104 . - . ID=gene-A3216_12595;Name=A3216_12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12595 GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 7280 8104 . - 0 ID=cds-OAX70327.1;Parent=gene-A3216_12595;Dbxref=NCBI_GP:OAX70327.1;Name=OAX70327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009954607.1;locus_tag=A3216_12595;product=sugar ABC transporter permease;protein_id=OAX70327.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 8091 8996 . - . ID=gene-A3216_12600;Name=A3216_12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12600 GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 8091 8996 . - 0 ID=cds-OAX70334.1;Parent=gene-A3216_12600;Dbxref=NCBI_GP:OAX70334.1;Name=OAX70334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015628050.1;locus_tag=A3216_12600;product=sugar ABC transporter permease;protein_id=OAX70334.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank pseudogene 9140 10594 . + . ID=gene-A3216_12605;Name=A3216_12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12605;pseudo=true GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 9140 10594 . + 0 ID=cds-A3216_12605;Parent=gene-A3216_12605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628443.1;locus_tag=A3216_12605;product=peptidase C69;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 10762 11031 . + . ID=gene-A3216_12610;Name=A3216_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12610 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 10762 11031 . + 0 ID=cds-OAX70328.1;Parent=gene-A3216_12610;Dbxref=NCBI_GP:OAX70328.1;Name=OAX70328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12610;product=hypothetical protein;protein_id=OAX70328.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 12476 12805 . - . ID=gene-A3216_12615;Name=A3216_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12615 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 12476 12805 . - 0 ID=cds-OAX70329.1;Parent=gene-A3216_12615;Dbxref=NCBI_GP:OAX70329.1;Name=OAX70329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12615;product=hypothetical protein;protein_id=OAX70329.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 13374 13589 . - . ID=gene-A3216_12620;Name=A3216_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12620 GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 13374 13589 . - 0 ID=cds-OAX70330.1;Parent=gene-A3216_12620;Dbxref=NCBI_GP:OAX70330.1;Name=OAX70330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908527.1;locus_tag=A3216_12620;product=hypothetical protein;protein_id=OAX70330.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 15306 15497 . + . ID=gene-A3216_12625;Name=A3216_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12625 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 15306 15497 . + 0 ID=cds-OAX70331.1;Parent=gene-A3216_12625;Dbxref=NCBI_GP:OAX70331.1;Name=OAX70331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12625;product=hypothetical protein;protein_id=OAX70331.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 15487 15675 . + . ID=gene-A3216_12630;Name=A3216_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12630 GCA_001648835.1|LVXE01000063.1 GeneMarkS+ CDS 15487 15675 . + 0 ID=cds-OAX70332.1;Parent=gene-A3216_12630;Dbxref=NCBI_GP:OAX70332.1;Name=OAX70332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12630;product=hypothetical protein;protein_id=OAX70332.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 15981 16325 . + . ID=gene-A3216_12635;Name=A3216_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12635 GCA_001648835.1|LVXE01000063.1 Protein Homology CDS 15981 16325 . + 0 ID=cds-OAX70333.1;Parent=gene-A3216_12635;Dbxref=NCBI_GP:OAX70333.1;Name=OAX70333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908526.1;locus_tag=A3216_12635;product=hypothetical protein;protein_id=OAX70333.1;transl_table=11 GCA_001648835.1|LVXE01000063.1 Genbank gene 16785 16858 . + . ID=gene-A3216_12640;Name=A3216_12640;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_12640 GCA_001648835.1|LVXE01000063.1 tRNAscan-SE tRNA 16785 16858 . + . ID=rna-A3216_12640;Parent=gene-A3216_12640;anticodon=(pos:16819..16821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12640;product=tRNA-Met GCA_001648835.1|LVXE01000063.1 tRNAscan-SE exon 16785 16858 . + . ID=exon-A3216_12640-1;Parent=rna-A3216_12640;anticodon=(pos:16819..16821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12640;product=tRNA-Met ##sequence-region LVXE01000064.1 1 16054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000064.1 Genbank region 1 16054 . + . ID=LVXE01000064.1:1..16054;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000064.1 Genbank gene 1329 1580 . + . ID=gene-A3216_12645;Name=A3216_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12645 GCA_001648835.1|LVXE01000064.1 GeneMarkS+ CDS 1329 1580 . + 0 ID=cds-OAX70310.1;Parent=gene-A3216_12645;Dbxref=NCBI_GP:OAX70310.1;Name=OAX70310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12645;product=hypothetical protein;protein_id=OAX70310.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 2327 2617 . + . ID=gene-A3216_12650;Name=A3216_12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12650 GCA_001648835.1|LVXE01000064.1 GeneMarkS+ CDS 2327 2617 . + 0 ID=cds-OAX70311.1;Parent=gene-A3216_12650;Dbxref=NCBI_GP:OAX70311.1;Name=OAX70311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12650;product=hypothetical protein;protein_id=OAX70311.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 3341 3697 . + . ID=gene-A3216_12655;Name=A3216_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12655 GCA_001648835.1|LVXE01000064.1 GeneMarkS+ CDS 3341 3697 . + 0 ID=cds-OAX70312.1;Parent=gene-A3216_12655;Dbxref=NCBI_GP:OAX70312.1;Name=OAX70312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12655;product=hypothetical protein;protein_id=OAX70312.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 3760 4089 . - . ID=gene-A3216_12660;Name=A3216_12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12660 GCA_001648835.1|LVXE01000064.1 GeneMarkS+ CDS 3760 4089 . - 0 ID=cds-OAX70313.1;Parent=gene-A3216_12660;Dbxref=NCBI_GP:OAX70313.1;Name=OAX70313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12660;product=hypothetical protein;protein_id=OAX70313.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 4761 4964 . + . ID=gene-A3216_12665;Name=A3216_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12665 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 4761 4964 . + 0 ID=cds-OAX70318.1;Parent=gene-A3216_12665;Dbxref=NCBI_GP:OAX70318.1;Name=OAX70318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006243848.1;locus_tag=A3216_12665;product=cold-shock protein;protein_id=OAX70318.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 5076 5678 . + . ID=gene-A3216_12670;Name=A3216_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12670 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 5076 5678 . + 0 ID=cds-OAX70314.1;Parent=gene-A3216_12670;Dbxref=NCBI_GP:OAX70314.1;Name=OAX70314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941197.1;locus_tag=A3216_12670;product=hypothetical protein;protein_id=OAX70314.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 5878 8739 . + . ID=gene-A3216_12675;Name=A3216_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12675 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 5878 8739 . + 0 ID=cds-OAX70315.1;Parent=gene-A3216_12675;Dbxref=NCBI_GP:OAX70315.1;Name=OAX70315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011741856.1;locus_tag=A3216_12675;product=DNA topoisomerase I;protein_id=OAX70315.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 8720 10312 . - . ID=gene-A3216_12680;Name=A3216_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12680 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 8720 10312 . - 0 ID=cds-OAX70316.1;Parent=gene-A3216_12680;Dbxref=NCBI_GP:OAX70316.1;Name=OAX70316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907593.1;locus_tag=A3216_12680;product=adenylyl cyclase;protein_id=OAX70316.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 10468 11685 . + . ID=gene-A3216_12685;Name=A3216_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12685 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 10468 11685 . + 0 ID=cds-OAX70319.1;Parent=gene-A3216_12685;Dbxref=NCBI_GP:OAX70319.1;Name=OAX70319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907594.1;locus_tag=A3216_12685;product=DNA polymerase III subunit delta';protein_id=OAX70319.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 11764 11839 . + . ID=gene-A3216_12690;Name=A3216_12690;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_12690 GCA_001648835.1|LVXE01000064.1 tRNAscan-SE tRNA 11764 11839 . + . ID=rna-A3216_12690;Parent=gene-A3216_12690;anticodon=(pos:11797..11799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12690;product=tRNA-Thr GCA_001648835.1|LVXE01000064.1 tRNAscan-SE exon 11764 11839 . + . ID=exon-A3216_12690-1;Parent=rna-A3216_12690;anticodon=(pos:11797..11799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12690;product=tRNA-Thr GCA_001648835.1|LVXE01000064.1 Genbank gene 13153 14883 . - . ID=gene-A3216_12695;Name=A3216_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12695 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 13153 14883 . - 0 ID=cds-OAX70320.1;Parent=gene-A3216_12695;Dbxref=NCBI_GP:OAX70320.1;Name=OAX70320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941199.1;locus_tag=A3216_12695;product=hypothetical protein;protein_id=OAX70320.1;transl_table=11 GCA_001648835.1|LVXE01000064.1 Genbank gene 14912 15871 . + . ID=gene-A3216_12700;Name=A3216_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12700 GCA_001648835.1|LVXE01000064.1 Protein Homology CDS 14912 15871 . + 0 ID=cds-OAX70317.1;Parent=gene-A3216_12700;Dbxref=NCBI_GP:OAX70317.1;Name=OAX70317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907596.1;locus_tag=A3216_12700;product=UDP-glucose 4-epimerase;protein_id=OAX70317.1;transl_table=11 ##sequence-region LVXE01000065.1 1 14554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000065.1 Genbank region 1 14554 . + . ID=LVXE01000065.1:1..14554;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000065.1 Genbank pseudogene 1 425 . - . ID=gene-A3216_12705;Name=A3216_12705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12705;pseudo=true GCA_001648835.1|LVXE01000065.1 GeneMarkS+ CDS 1 425 . - 0 ID=cds-A3216_12705;Parent=gene-A3216_12705;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12705;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 710 1093 . - . ID=gene-A3216_12710;Name=A3216_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12710 GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 710 1093 . - 0 ID=cds-OAX70302.1;Parent=gene-A3216_12710;Dbxref=NCBI_GP:OAX70302.1;Name=OAX70302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907955.1;locus_tag=A3216_12710;product=hypothetical protein;protein_id=OAX70302.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 1224 1499 . - . ID=gene-A3216_12715;Name=A3216_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12715 GCA_001648835.1|LVXE01000065.1 GeneMarkS+ CDS 1224 1499 . - 0 ID=cds-OAX70303.1;Parent=gene-A3216_12715;Dbxref=NCBI_GP:OAX70303.1;Name=OAX70303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12715;product=hypothetical protein;protein_id=OAX70303.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 1483 1680 . - . ID=gene-A3216_12720;Name=A3216_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12720 GCA_001648835.1|LVXE01000065.1 GeneMarkS+ CDS 1483 1680 . - 0 ID=cds-OAX70304.1;Parent=gene-A3216_12720;Dbxref=NCBI_GP:OAX70304.1;Name=OAX70304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12720;product=hypothetical protein;protein_id=OAX70304.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank pseudogene 2404 4017 . + . ID=gene-A3216_12725;Name=A3216_12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12725;pseudo=true GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 2404 4017 . + 0 ID=cds-A3216_12725;Parent=gene-A3216_12725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018601275.1;locus_tag=A3216_12725;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 4059 4131 . - . ID=gene-A3216_12730;Name=A3216_12730;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_12730 GCA_001648835.1|LVXE01000065.1 tRNAscan-SE tRNA 4059 4131 . - . ID=rna-A3216_12730;Parent=gene-A3216_12730;anticodon=(pos:complement(4096..4098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12730;product=tRNA-Asn GCA_001648835.1|LVXE01000065.1 tRNAscan-SE exon 4059 4131 . - . ID=exon-A3216_12730-1;Parent=rna-A3216_12730;anticodon=(pos:complement(4096..4098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_12730;product=tRNA-Asn GCA_001648835.1|LVXE01000065.1 Genbank gene 4317 4574 . + . ID=gene-A3216_12735;Name=A3216_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12735 GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 4317 4574 . + 0 ID=cds-OAX70309.1;Parent=gene-A3216_12735;Dbxref=NCBI_GP:OAX70309.1;Name=OAX70309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872504.1;locus_tag=A3216_12735;product=hypothetical protein;protein_id=OAX70309.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 4589 6517 . - . ID=gene-A3216_12740;Name=A3216_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12740 GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 4589 6517 . - 0 ID=cds-OAX70305.1;Parent=gene-A3216_12740;Dbxref=NCBI_GP:OAX70305.1;Name=OAX70305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCG2.1;locus_tag=A3216_12740;product=DNA primase;protein_id=OAX70305.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 6573 6788 . - . ID=gene-A3216_12745;Name=A3216_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12745 GCA_001648835.1|LVXE01000065.1 GeneMarkS+ CDS 6573 6788 . - 0 ID=cds-OAX70306.1;Parent=gene-A3216_12745;Dbxref=NCBI_GP:OAX70306.1;Name=OAX70306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12745;product=hypothetical protein;protein_id=OAX70306.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 7212 8501 . - . ID=gene-A3216_12750;Name=A3216_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12750 GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 7212 8501 . - 0 ID=cds-OAX70307.1;Parent=gene-A3216_12750;Dbxref=NCBI_GP:OAX70307.1;Name=OAX70307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCG3.1;locus_tag=A3216_12750;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=OAX70307.1;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank pseudogene 8647 10668 . + . ID=gene-A3216_12755;Name=A3216_12755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12755;pseudo=true GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 8647 10668 . + 0 ID=cds-A3216_12755;Parent=gene-A3216_12755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007770297.1;locus_tag=A3216_12755;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank pseudogene 13060 13349 . + . ID=gene-A3216_12760;Name=A3216_12760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12760;pseudo=true GCA_001648835.1|LVXE01000065.1 Protein Homology CDS 13060 13349 . + 0 ID=cds-A3216_12760;Parent=gene-A3216_12760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015294376.1;locus_tag=A3216_12760;product=transposase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000065.1 Genbank gene 13454 13852 . + . ID=gene-A3216_12765;Name=A3216_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12765 GCA_001648835.1|LVXE01000065.1 GeneMarkS+ CDS 13454 13852 . + 0 ID=cds-OAX70308.1;Parent=gene-A3216_12765;Dbxref=NCBI_GP:OAX70308.1;Name=OAX70308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12765;product=hypothetical protein;protein_id=OAX70308.1;transl_table=11 ##sequence-region LVXE01000066.1 1 14300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000066.1 Genbank region 1 14300 . + . ID=LVXE01000066.1:1..14300;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000066.1 Genbank gene 141 563 . + . ID=gene-A3216_12770;Name=A3216_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12770 GCA_001648835.1|LVXE01000066.1 GeneMarkS+ CDS 141 563 . + 0 ID=cds-OAX70290.1;Parent=gene-A3216_12770;Dbxref=NCBI_GP:OAX70290.1;Name=OAX70290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12770;product=hypothetical protein;protein_id=OAX70290.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 3946 4140 . + . ID=gene-A3216_12775;Name=A3216_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12775 GCA_001648835.1|LVXE01000066.1 GeneMarkS+ CDS 3946 4140 . + 0 ID=cds-OAX70291.1;Parent=gene-A3216_12775;Dbxref=NCBI_GP:OAX70291.1;Name=OAX70291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12775;product=hypothetical protein;protein_id=OAX70291.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 4446 4796 . + . ID=gene-A3216_12780;Name=A3216_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12780 GCA_001648835.1|LVXE01000066.1 GeneMarkS+ CDS 4446 4796 . + 0 ID=cds-OAX70292.1;Parent=gene-A3216_12780;Dbxref=NCBI_GP:OAX70292.1;Name=OAX70292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12780;product=hypothetical protein;protein_id=OAX70292.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 7116 7379 . - . ID=gene-A3216_12785;Name=A3216_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12785 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 7116 7379 . - 0 ID=cds-OAX70293.1;Parent=gene-A3216_12785;Dbxref=NCBI_GP:OAX70293.1;Name=OAX70293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907676.1;locus_tag=A3216_12785;product=hypothetical protein;protein_id=OAX70293.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 7781 8710 . - . ID=gene-A3216_12790;Name=A3216_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12790 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 7781 8710 . - 0 ID=cds-OAX70294.1;Parent=gene-A3216_12790;Dbxref=NCBI_GP:OAX70294.1;Name=OAX70294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8ZUB0.2;locus_tag=A3216_12790;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=OAX70294.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 8700 10121 . - . ID=gene-A3216_12795;Name=A3216_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12795 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 8700 10121 . - 0 ID=cds-OAX70295.1;Parent=gene-A3216_12795;Dbxref=NCBI_GP:OAX70295.1;Name=OAX70295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57990.1;locus_tag=A3216_12795;product=cysteine--tRNA ligase;protein_id=OAX70295.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 10176 10652 . - . ID=gene-A3216_12800;Name=A3216_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12800 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 10176 10652 . - 0 ID=cds-OAX70296.1;Parent=gene-A3216_12800;Dbxref=NCBI_GP:OAX70296.1;Name=OAX70296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCW5.1;locus_tag=A3216_12800;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=OAX70296.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 10649 11374 . - . ID=gene-A3216_12805;Name=A3216_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12805 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 10649 11374 . - 0 ID=cds-OAX70297.1;Parent=gene-A3216_12805;Dbxref=NCBI_GP:OAX70297.1;Name=OAX70297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCW6.1;locus_tag=A3216_12805;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OAX70297.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 11393 11881 . - . ID=gene-A3216_12810;Name=A3216_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12810 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 11393 11881 . - 0 ID=cds-OAX70298.1;Parent=gene-A3216_12810;Dbxref=NCBI_GP:OAX70298.1;Name=OAX70298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007528440.1;locus_tag=A3216_12810;product=CarD family transcriptional regulator;protein_id=OAX70298.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 12251 12802 . + . ID=gene-A3216_12815;Name=A3216_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12815 GCA_001648835.1|LVXE01000066.1 Protein Homology CDS 12251 12802 . + 0 ID=cds-OAX70299.1;Parent=gene-A3216_12815;Dbxref=NCBI_GP:OAX70299.1;Name=OAX70299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9ZBM7.1;locus_tag=A3216_12815;product=hypothetical protein;protein_id=OAX70299.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 13492 13749 . + . ID=gene-A3216_12820;Name=A3216_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12820 GCA_001648835.1|LVXE01000066.1 GeneMarkS+ CDS 13492 13749 . + 0 ID=cds-OAX70300.1;Parent=gene-A3216_12820;Dbxref=NCBI_GP:OAX70300.1;Name=OAX70300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12820;product=hypothetical protein;protein_id=OAX70300.1;transl_table=11 GCA_001648835.1|LVXE01000066.1 Genbank gene 13965 14216 . + . ID=gene-A3216_12825;Name=A3216_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12825 GCA_001648835.1|LVXE01000066.1 GeneMarkS+ CDS 13965 14216 . + 0 ID=cds-OAX70301.1;Parent=gene-A3216_12825;Dbxref=NCBI_GP:OAX70301.1;Name=OAX70301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12825;product=hypothetical protein;protein_id=OAX70301.1;transl_table=11 ##sequence-region LVXE01000067.1 1 14263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000067.1 Genbank region 1 14263 . + . ID=LVXE01000067.1:1..14263;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000067.1 Genbank pseudogene 1 431 . + . ID=gene-A3216_12830;Name=A3216_12830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12830;pseudo=true GCA_001648835.1|LVXE01000067.1 GeneMarkS+ CDS 1 431 . + 2 ID=cds-A3216_12830;Parent=gene-A3216_12830;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12830;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 714 1397 . - . ID=gene-A3216_12835;Name=A3216_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12835 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 714 1397 . - 0 ID=cds-OAX70281.1;Parent=gene-A3216_12835;Dbxref=NCBI_GP:OAX70281.1;Name=OAX70281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907956.1;locus_tag=A3216_12835;product=serine O-acetyltransferase;protein_id=OAX70281.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 1400 2332 . - . ID=gene-A3216_12840;Name=A3216_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12840 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 1400 2332 . - 0 ID=cds-OAX70282.1;Parent=gene-A3216_12840;Dbxref=NCBI_GP:OAX70282.1;Name=OAX70282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711373.1;locus_tag=A3216_12840;product=cysteine synthase A;protein_id=OAX70282.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 2329 3633 . - . ID=gene-A3216_12845;Name=A3216_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12845 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 2329 3633 . - 0 ID=cds-OAX70283.1;Parent=gene-A3216_12845;Dbxref=NCBI_GP:OAX70283.1;Name=OAX70283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907958.1;locus_tag=A3216_12845;product=TQXA domain-containing protein;protein_id=OAX70283.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 4016 4939 . + . ID=gene-A3216_12850;Name=A3216_12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12850 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 4016 4939 . + 0 ID=cds-OAX70284.1;Parent=gene-A3216_12850;Dbxref=NCBI_GP:OAX70284.1;Name=OAX70284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907959.1;locus_tag=A3216_12850;product=hypothetical protein;protein_id=OAX70284.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 5595 6830 . + . ID=gene-A3216_12855;Name=A3216_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12855 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 5595 6830 . + 0 ID=cds-OAX70288.1;Parent=gene-A3216_12855;Dbxref=NCBI_GP:OAX70288.1;Name=OAX70288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907960.1;locus_tag=A3216_12855;product=cysteine desulfurase;protein_id=OAX70288.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank pseudogene 6955 7442 . + . ID=gene-A3216_12860;Name=A3216_12860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12860;pseudo=true GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 6955 7442 . + 0 ID=cds-A3216_12860;Parent=gene-A3216_12860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878272.1;locus_tag=A3216_12860;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 7603 9156 . + . ID=gene-A3216_12865;Name=A3216_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12865 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 7603 9156 . + 0 ID=cds-OAX70285.1;Parent=gene-A3216_12865;Dbxref=NCBI_GP:OAX70285.1;Name=OAX70285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907961.1;locus_tag=A3216_12865;product=MFS transporter;protein_id=OAX70285.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 9144 9725 . - . ID=gene-A3216_12870;Name=A3216_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12870 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 9144 9725 . - 0 ID=cds-OAX70286.1;Parent=gene-A3216_12870;Dbxref=NCBI_GP:OAX70286.1;Name=OAX70286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907962.1;locus_tag=A3216_12870;product=hypothetical protein;protein_id=OAX70286.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 10527 10796 . + . ID=gene-A3216_12875;Name=A3216_12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12875 GCA_001648835.1|LVXE01000067.1 GeneMarkS+ CDS 10527 10796 . + 0 ID=cds-OAX70287.1;Parent=gene-A3216_12875;Dbxref=NCBI_GP:OAX70287.1;Name=OAX70287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12875;product=hypothetical protein;protein_id=OAX70287.1;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank pseudogene 10950 13122 . + . ID=gene-A3216_12880;Name=A3216_12880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12880;pseudo=true GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 10950 13122 . + 0 ID=cds-A3216_12880;Parent=gene-A3216_12880;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907963.1;locus_tag=A3216_12880;product=cobalt ABC transporter ATP-binding protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000067.1 Genbank gene 13134 13970 . + . ID=gene-A3216_12885;Name=A3216_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12885 GCA_001648835.1|LVXE01000067.1 Protein Homology CDS 13134 13970 . + 0 ID=cds-OAX70289.1;Parent=gene-A3216_12885;Dbxref=NCBI_GP:OAX70289.1;Name=OAX70289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020730370.1;locus_tag=A3216_12885;product=hypothetical protein;protein_id=OAX70289.1;transl_table=11 ##sequence-region LVXE01000068.1 1 15339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000068.1 Genbank region 1 15339 . + . ID=LVXE01000068.1:1..15339;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000068.1 Genbank gene 241 612 . - . ID=gene-A3216_12890;Name=A3216_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12890 GCA_001648835.1|LVXE01000068.1 GeneMarkS+ CDS 241 612 . - 0 ID=cds-OAX70267.1;Parent=gene-A3216_12890;Dbxref=NCBI_GP:OAX70267.1;Name=OAX70267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12890;product=hypothetical protein;protein_id=OAX70267.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 1294 1506 . + . ID=gene-A3216_12895;Name=A3216_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12895 GCA_001648835.1|LVXE01000068.1 GeneMarkS+ CDS 1294 1506 . + 0 ID=cds-OAX70268.1;Parent=gene-A3216_12895;Dbxref=NCBI_GP:OAX70268.1;Name=OAX70268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12895;product=hypothetical protein;protein_id=OAX70268.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 1867 2109 . - . ID=gene-A3216_12900;Name=A3216_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12900 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 1867 2109 . - 0 ID=cds-OAX70269.1;Parent=gene-A3216_12900;Dbxref=NCBI_GP:OAX70269.1;Name=OAX70269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908248.1;locus_tag=A3216_12900;product=hypothetical protein;protein_id=OAX70269.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 4519 5589 . - . ID=gene-A3216_12905;Name=A3216_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12905 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 4519 5589 . - 0 ID=cds-OAX70276.1;Parent=gene-A3216_12905;Dbxref=NCBI_GP:OAX70276.1;Name=OAX70276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015356116.1;locus_tag=A3216_12905;product=dihydroorotate dehydrogenase (quinone);protein_id=OAX70276.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 5610 5807 . - . ID=gene-A3216_12910;Name=A3216_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12910 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 5610 5807 . - 0 ID=cds-OAX70275.1;Parent=gene-A3216_12910;Dbxref=NCBI_GP:OAX70275.1;Name=OAX70275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170409.1;locus_tag=A3216_12910;product=dihydroorotate dehydrogenase;protein_id=OAX70275.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 5861 6910 . - . ID=gene-A3216_12915;Name=A3216_12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12915 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 5861 6910 . - 0 ID=cds-OAX70270.1;Parent=gene-A3216_12915;Dbxref=NCBI_GP:OAX70270.1;Name=OAX70270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015290435.1;locus_tag=A3216_12915;product=hypothetical protein;protein_id=OAX70270.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 7028 7330 . + . ID=gene-A3216_12920;Name=A3216_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12920 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 7028 7330 . + 0 ID=cds-OAX70271.1;Parent=gene-A3216_12920;Dbxref=NCBI_GP:OAX70271.1;Name=OAX70271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015627929.1;locus_tag=A3216_12920;product=hypothetical protein;protein_id=OAX70271.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 7389 8219 . + . ID=gene-A3216_12925;Name=A3216_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12925 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 7389 8219 . + 0 ID=cds-OAX70277.1;Parent=gene-A3216_12925;Dbxref=NCBI_GP:OAX70277.1;Name=OAX70277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014816362.1;locus_tag=A3216_12925;product=undecaprenyl-diphosphatase;protein_id=OAX70277.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 8216 8968 . + . ID=gene-A3216_12930;Name=A3216_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12930 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 8216 8968 . + 0 ID=cds-OAX70272.1;Parent=gene-A3216_12930;Dbxref=NCBI_GP:OAX70272.1;Name=OAX70272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908253.1;locus_tag=A3216_12930;product=phosphoglycerate mutase;protein_id=OAX70272.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 9046 9636 . + . ID=gene-A3216_12935;Name=A3216_12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12935 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 9046 9636 . + 0 ID=cds-OAX70273.1;Parent=gene-A3216_12935;Dbxref=NCBI_GP:OAX70273.1;Name=OAX70273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908254.1;locus_tag=A3216_12935;product=hypothetical protein;protein_id=OAX70273.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 9647 10435 . + . ID=gene-A3216_12940;Name=A3216_12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12940 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 9647 10435 . + 0 ID=cds-OAX70278.1;Parent=gene-A3216_12940;Dbxref=NCBI_GP:OAX70278.1;Name=OAX70278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009957753.1;locus_tag=A3216_12940;product=phosphatidylinositol kinase;protein_id=OAX70278.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 10474 11289 . + . ID=gene-A3216_12945;Name=A3216_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12945 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 10474 11289 . + 0 ID=cds-OAX70279.1;Parent=gene-A3216_12945;Dbxref=NCBI_GP:OAX70279.1;Name=OAX70279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46726.2;locus_tag=A3216_12945;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=OAX70279.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 11392 12639 . + . ID=gene-A3216_12950;Name=A3216_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12950 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 11392 12639 . + 0 ID=cds-OAX70280.1;Parent=gene-A3216_12950;Dbxref=NCBI_GP:OAX70280.1;Name=OAX70280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014711525.1;locus_tag=A3216_12950;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=OAX70280.1;transl_table=11 GCA_001648835.1|LVXE01000068.1 Genbank gene 13774 15270 . - . ID=gene-A3216_12955;Name=A3216_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12955 GCA_001648835.1|LVXE01000068.1 Protein Homology CDS 13774 15270 . - 0 ID=cds-OAX70274.1;Parent=gene-A3216_12955;Dbxref=NCBI_GP:OAX70274.1;Name=OAX70274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908258.1;locus_tag=A3216_12955;product=L-asparagine permease;protein_id=OAX70274.1;transl_table=11 ##sequence-region LVXE01000069.1 1 13480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000069.1 Genbank region 1 13480 . + . ID=LVXE01000069.1:1..13480;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000069.1 Genbank gene 392 592 . - . ID=gene-A3216_12960;Name=A3216_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12960 GCA_001648835.1|LVXE01000069.1 GeneMarkS+ CDS 392 592 . - 0 ID=cds-OAX70261.1;Parent=gene-A3216_12960;Dbxref=NCBI_GP:OAX70261.1;Name=OAX70261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_12960;product=hypothetical protein;protein_id=OAX70261.1;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank pseudogene 2172 3158 . + . ID=gene-A3216_12965;Name=A3216_12965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12965;pseudo=true GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 2172 3158 . + 0 ID=cds-A3216_12965;Parent=gene-A3216_12965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015294529.1;locus_tag=A3216_12965;product=3-ketosteroid-9-alpha-hydroxylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank pseudogene 3253 3735 . + . ID=gene-A3216_12970;Name=A3216_12970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12970;pseudo=true GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 3253 3735 . + 0 ID=cds-A3216_12970;Parent=gene-A3216_12970;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003877119.1;locus_tag=A3216_12970;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank pseudogene 3961 5827 . - . ID=gene-A3216_12975;Name=A3216_12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12975;pseudo=true GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 3961 5827 . - 0 ID=cds-A3216_12975;Parent=gene-A3216_12975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383756.1;locus_tag=A3216_12975;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank pseudogene 6145 6714 . + . ID=gene-A3216_12980;Name=A3216_12980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_12980;pseudo=true GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 6145 6714 . + 0 ID=cds-A3216_12980;Parent=gene-A3216_12980;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008263559.1;locus_tag=A3216_12980;product=transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank gene 7988 8896 . + . ID=gene-A3216_12985;Name=A3216_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12985 GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 7988 8896 . + 0 ID=cds-OAX70266.1;Parent=gene-A3216_12985;Dbxref=NCBI_GP:OAX70266.1;Name=OAX70266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907680.1;locus_tag=A3216_12985;product=ABC transporter substrate-binding protein;protein_id=OAX70266.1;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank gene 8905 9732 . + . ID=gene-A3216_12990;Name=A3216_12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12990 GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 8905 9732 . + 0 ID=cds-OAX70262.1;Parent=gene-A3216_12990;Dbxref=NCBI_GP:OAX70262.1;Name=OAX70262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907679.1;locus_tag=A3216_12990;product=ABC transporter ATP-binding protein;protein_id=OAX70262.1;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank gene 9732 10592 . + . ID=gene-A3216_12995;Name=A3216_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_12995 GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 9732 10592 . + 0 ID=cds-OAX70263.1;Parent=gene-A3216_12995;Dbxref=NCBI_GP:OAX70263.1;Name=OAX70263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907678.1;locus_tag=A3216_12995;product=helicase;protein_id=OAX70263.1;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank gene 11523 12281 . + . ID=gene-A3216_13000;Name=A3216_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13000 GCA_001648835.1|LVXE01000069.1 Protein Homology CDS 11523 12281 . + 0 ID=cds-OAX70264.1;Parent=gene-A3216_13000;Dbxref=NCBI_GP:OAX70264.1;Name=OAX70264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379003.1;locus_tag=A3216_13000;product=hypothetical protein;protein_id=OAX70264.1;transl_table=11 GCA_001648835.1|LVXE01000069.1 Genbank gene 12457 12852 . - . ID=gene-A3216_13005;Name=A3216_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13005 GCA_001648835.1|LVXE01000069.1 GeneMarkS+ CDS 12457 12852 . - 0 ID=cds-OAX70265.1;Parent=gene-A3216_13005;Dbxref=NCBI_GP:OAX70265.1;Name=OAX70265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13005;product=hypothetical protein;protein_id=OAX70265.1;transl_table=11 ##sequence-region LVXE01000007.1 1 73751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000007.1 Genbank region 1 73751 . + . ID=LVXE01000007.1:1..73751;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000007.1 Genbank gene 600 992 . - . ID=gene-A3216_03930;Name=A3216_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03930 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 600 992 . - 0 ID=cds-OAX71685.1;Parent=gene-A3216_03930;Dbxref=NCBI_GP:OAX71685.1;Name=OAX71685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908030.1;locus_tag=A3216_03930;product=hypothetical protein;protein_id=OAX71685.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 1065 1865 . - . ID=gene-A3216_03935;Name=A3216_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03935 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 1065 1865 . - 0 ID=cds-OAX71686.1;Parent=gene-A3216_03935;Dbxref=NCBI_GP:OAX71686.1;Name=OAX71686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46815.1;locus_tag=A3216_03935;product=cell wall synthesis protein;protein_id=OAX71686.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 2112 2402 . - . ID=gene-A3216_03940;Name=A3216_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03940 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 2112 2402 . - 0 ID=cds-OAX71687.1;Parent=gene-A3216_03940;Dbxref=NCBI_GP:OAX71687.1;Name=OAX71687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170773.1;locus_tag=A3216_03940;product=hypothetical protein;protein_id=OAX71687.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 2527 3159 . - . ID=gene-A3216_03945;Name=A3216_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03945 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 2527 3159 . - 0 ID=cds-OAX71688.1;Parent=gene-A3216_03945;Dbxref=NCBI_GP:OAX71688.1;Name=OAX71688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q73YR4.1;locus_tag=A3216_03945;product=cell division protein SepF;protein_id=OAX71688.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 3227 4009 . - . ID=gene-A3216_03950;Name=A3216_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03950 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 3227 4009 . - 0 ID=cds-OAX71689.1;Parent=gene-A3216_03950;Dbxref=NCBI_GP:OAX71689.1;Name=OAX71689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908026.1;locus_tag=A3216_03950;product=YggS family pyridoxal phosphate enzyme;protein_id=OAX71689.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 4006 4755 . - . ID=gene-A3216_03955;Name=A3216_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03955 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 4006 4755 . - 0 ID=cds-OAX71690.1;Parent=gene-A3216_03955;Dbxref=NCBI_GP:OAX71690.1;Name=OAX71690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCE3.1;locus_tag=A3216_03955;product=Laccase;protein_id=OAX71690.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 4778 5917 . - . ID=gene-A3216_03960;Name=A3216_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03960 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 4778 5917 . - 0 ID=cds-OAX71738.1;Parent=gene-A3216_03960;Dbxref=NCBI_GP:OAX71738.1;Name=OAX71738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003909602.1;locus_tag=A3216_03960;product=cell division protein FtsZ;protein_id=OAX71738.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 6183 7208 . - . ID=gene-A3216_03965;Name=A3216_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03965 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 6183 7208 . - 0 ID=cds-OAX71691.1;Parent=gene-A3216_03965;Dbxref=NCBI_GP:OAX71691.1;Name=OAX71691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8ZQQ2.1;locus_tag=A3216_03965;product=cell division protein FtsQ;protein_id=OAX71691.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 7205 8692 . - . ID=gene-A3216_03970;Name=A3216_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03970 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 7205 8692 . - 0 ID=cds-OAX71692.1;Parent=gene-A3216_03970;Dbxref=NCBI_GP:OAX71692.1;Name=OAX71692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57994.1;locus_tag=A3216_03970;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=OAX71692.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 8689 9912 . - . ID=gene-A3216_03975;Name=A3216_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03975 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 8689 9912 . - 0 ID=cds-OAX71693.1;Parent=gene-A3216_03975;Dbxref=NCBI_GP:OAX71693.1;Name=OAX71693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69552.1;locus_tag=A3216_03975;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=OAX71693.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 9909 11513 . - . ID=gene-A3216_03980;Name=A3216_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03980 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 9909 11513 . - 0 ID=cds-OAX71739.1;Parent=gene-A3216_03980;Dbxref=NCBI_GP:OAX71739.1;Name=OAX71739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908020.1;locus_tag=A3216_03980;product=cell division protein FtsW;protein_id=OAX71739.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 11520 12992 . - . ID=gene-A3216_03985;Name=A3216_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03985 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 11520 12992 . - 0 ID=cds-OAX71694.1;Parent=gene-A3216_03985;Dbxref=NCBI_GP:OAX71694.1;Name=OAX71694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57995.1;locus_tag=A3216_03985;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=OAX71694.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 12994 14073 . - . ID=gene-A3216_03990;Name=A3216_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03990 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 12994 14073 . - 0 ID=cds-OAX71695.1;Parent=gene-A3216_03990;Dbxref=NCBI_GP:OAX71695.1;Name=OAX71695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003933045.1;locus_tag=A3216_03990;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=OAX71695.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 14070 15623 . - . ID=gene-A3216_03995;Name=A3216_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_03995 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 14070 15623 . - 0 ID=cds-OAX71696.1;Parent=gene-A3216_03995;Dbxref=NCBI_GP:OAX71696.1;Name=OAX71696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69556.1;locus_tag=A3216_03995;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=OAX71696.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 15620 17227 . - . ID=gene-A3216_04000;Name=A3216_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04000 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 15620 17227 . - 0 ID=cds-OAX71740.1;Parent=gene-A3216_04000;Dbxref=NCBI_GP:OAX71740.1;Name=OAX71740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020188886.1;locus_tag=A3216_04000;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=OAX71740.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 17354 19381 . - . ID=gene-A3216_04005;Name=A3216_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04005 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 17354 19381 . - 0 ID=cds-OAX71697.1;Parent=gene-A3216_04005;Dbxref=NCBI_GP:OAX71697.1;Name=OAX71697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908015.1;locus_tag=A3216_04005;product=cell division protein FtsI;protein_id=OAX71697.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 19378 20511 . - . ID=gene-A3216_04010;Name=A3216_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04010 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 19378 20511 . - 0 ID=cds-OAX71698.1;Parent=gene-A3216_04010;Dbxref=NCBI_GP:OAX71698.1;Name=OAX71698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908014.1;locus_tag=A3216_04010;product=hypothetical protein;protein_id=OAX71698.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 20508 21626 . - . ID=gene-A3216_04015;Name=A3216_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04015 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 20508 21626 . - 0 ID=cds-OAX71741.1;Parent=gene-A3216_04015;Dbxref=NCBI_GP:OAX71741.1;Name=OAX71741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908013.1;locus_tag=A3216_04015;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=OAX71741.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 21754 22185 . - . ID=gene-A3216_04020;Name=A3216_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04020 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 21754 22185 . - 0 ID=cds-OAX71699.1;Parent=gene-A3216_04020;Dbxref=NCBI_GP:OAX71699.1;Name=OAX71699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908012.1;locus_tag=A3216_04020;product=cell division/cell wall cluster transcriptional repressor MraZ;protein_id=OAX71699.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 22558 22962 . - . ID=gene-A3216_04025;Name=A3216_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04025 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 22558 22962 . - 0 ID=cds-OAX71700.1;Parent=gene-A3216_04025;Dbxref=NCBI_GP:OAX71700.1;Name=OAX71700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170791.1;locus_tag=A3216_04025;product=hypothetical protein;protein_id=OAX71700.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 23279 23911 . + . ID=gene-A3216_04030;Name=A3216_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04030 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 23279 23911 . + 0 ID=cds-OAX71701.1;Parent=gene-A3216_04030;Dbxref=NCBI_GP:OAX71701.1;Name=OAX71701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908010.1;locus_tag=A3216_04030;product=acetyltransferase;protein_id=OAX71701.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 23983 24702 . + . ID=gene-A3216_04035;Name=A3216_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04035 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 23983 24702 . + 0 ID=cds-OAX71742.1;Parent=gene-A3216_04035;Dbxref=NCBI_GP:OAX71742.1;Name=OAX71742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908009.1;locus_tag=A3216_04035;product=DUF3153 domain-containing protein;protein_id=OAX71742.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 24699 25613 . - . ID=gene-A3216_04040;Name=A3216_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04040 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 24699 25613 . - 0 ID=cds-OAX71702.1;Parent=gene-A3216_04040;Dbxref=NCBI_GP:OAX71702.1;Name=OAX71702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908008.1;locus_tag=A3216_04040;product=hypothetical protein;protein_id=OAX71702.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank pseudogene 25898 26938 . + . ID=gene-A3216_04045;Name=A3216_04045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04045;pseudo=true GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 25898 26938 . + 0 ID=cds-A3216_04045;Parent=gene-A3216_04045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014877980.1;locus_tag=A3216_04045;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 26952 28469 . + . ID=gene-A3216_04050;Name=A3216_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04050 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 26952 28469 . + 0 ID=cds-OAX71703.1;Parent=gene-A3216_04050;Dbxref=NCBI_GP:OAX71703.1;Name=OAX71703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908007.1;locus_tag=A3216_04050;product=DUF2029 domain-containing protein;protein_id=OAX71703.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 28466 28870 . - . ID=gene-A3216_04055;Name=A3216_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04055 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 28466 28870 . - 0 ID=cds-OAX71743.1;Parent=gene-A3216_04055;Dbxref=NCBI_GP:OAX71743.1;Name=OAX71743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382392.1;locus_tag=A3216_04055;product=DNA-binding protein;protein_id=OAX71743.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 29023 30225 . + . ID=gene-A3216_04060;Name=A3216_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04060 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 29023 30225 . + 0 ID=cds-OAX71744.1;Parent=gene-A3216_04060;Dbxref=NCBI_GP:OAX71744.1;Name=OAX71744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908005.1;locus_tag=A3216_04060;product=serine/threonine protein kinase;protein_id=OAX71744.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 30238 31626 . - . ID=gene-A3216_04065;Name=A3216_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04065 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 30238 31626 . - 0 ID=cds-OAX71704.1;Parent=gene-A3216_04065;Dbxref=NCBI_GP:OAX71704.1;Name=OAX71704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019970054.1;locus_tag=A3216_04065;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=OAX71704.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 31690 32205 . - . ID=gene-A3216_04070;Name=A3216_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04070 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 31690 32205 . - 0 ID=cds-OAX71705.1;Parent=gene-A3216_04070;Dbxref=NCBI_GP:OAX71705.1;Name=OAX71705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908003.1;locus_tag=A3216_04070;product=hypothetical protein;protein_id=OAX71705.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank pseudogene 32333 33104 . - . ID=gene-A3216_04075;Name=A3216_04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04075;pseudo=true GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 32333 33104 . - 0 ID=cds-A3216_04075;Parent=gene-A3216_04075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020729408.1;locus_tag=A3216_04075;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 33222 34508 . + . ID=gene-A3216_04080;Name=A3216_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04080 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 33222 34508 . + 0 ID=cds-OAX71745.1;Parent=gene-A3216_04080;Dbxref=NCBI_GP:OAX71745.1;Name=OAX71745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908002.1;locus_tag=A3216_04080;product=alpha-(1-2)-phosphatidylinositol mannosyltransferase;protein_id=OAX71745.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 34516 35250 . - . ID=gene-A3216_04085;Name=A3216_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04085 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 34516 35250 . - 0 ID=cds-OAX71706.1;Parent=gene-A3216_04085;Dbxref=NCBI_GP:OAX71706.1;Name=OAX71706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006240879.1;locus_tag=A3216_04085;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OAX71706.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 35336 35728 . - . ID=gene-A3216_04090;Name=A3216_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04090 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 35336 35728 . - 0 ID=cds-OAX71746.1;Parent=gene-A3216_04090;Dbxref=NCBI_GP:OAX71746.1;Name=OAX71746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908000.1;locus_tag=A3216_04090;product=hypothetical protein;protein_id=OAX71746.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 35725 36972 . - . ID=gene-A3216_04095;Name=A3216_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04095 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 35725 36972 . - 0 ID=cds-OAX71707.1;Parent=gene-A3216_04095;Dbxref=NCBI_GP:OAX71707.1;Name=OAX71707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907999.1;locus_tag=A3216_04095;product=hypothetical protein;protein_id=OAX71707.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 36993 37427 . - . ID=gene-A3216_04100;Name=A3216_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04100 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 36993 37427 . - 0 ID=cds-OAX71708.1;Parent=gene-A3216_04100;Dbxref=NCBI_GP:OAX71708.1;Name=OAX71708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015290472.1;locus_tag=A3216_04100;product=cyclase;protein_id=OAX71708.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 37546 37953 . - . ID=gene-A3216_04105;Name=A3216_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04105 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 37546 37953 . - 0 ID=cds-OAX71709.1;Parent=gene-A3216_04105;Dbxref=NCBI_GP:OAX71709.1;Name=OAX71709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907997.1;locus_tag=A3216_04105;product=polyketide cyclase / dehydrase and lipid transport;protein_id=OAX71709.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 38128 39930 . + . ID=gene-A3216_04110;Name=A3216_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04110 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 38128 39930 . + 0 ID=cds-OAX71710.1;Parent=gene-A3216_04110;Dbxref=NCBI_GP:OAX71710.1;Name=OAX71710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170808.1;locus_tag=A3216_04110;product=long-chain fatty acid--CoA ligase;protein_id=OAX71710.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 39927 41081 . - . ID=gene-A3216_04115;Name=A3216_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04115 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 39927 41081 . - 0 ID=cds-OAX71711.1;Parent=gene-A3216_04115;Dbxref=NCBI_GP:OAX71711.1;Name=OAX71711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907995.1;locus_tag=A3216_04115;product=alpha-(1-2)-phosphatidylinositol mannosyltransferase;protein_id=OAX71711.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 41126 42250 . - . ID=gene-A3216_04120;Name=A3216_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04120 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 41126 42250 . - 0 ID=cds-OAX71712.1;Parent=gene-A3216_04120;Dbxref=NCBI_GP:OAX71712.1;Name=OAX71712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907994.1;locus_tag=A3216_04120;product=endopeptidase;protein_id=OAX71712.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 42348 42617 . - . ID=gene-A3216_04125;Name=A3216_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04125 GCA_001648835.1|LVXE01000007.1 GeneMarkS+ CDS 42348 42617 . - 0 ID=cds-OAX71713.1;Parent=gene-A3216_04125;Dbxref=NCBI_GP:OAX71713.1;Name=OAX71713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04125;product=hypothetical protein;protein_id=OAX71713.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 44449 45549 . - . ID=gene-A3216_04130;Name=A3216_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04130 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 44449 45549 . - 0 ID=cds-OAX71747.1;Parent=gene-A3216_04130;Dbxref=NCBI_GP:OAX71747.1;Name=OAX71747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69581.1;locus_tag=A3216_04130;product=anthranilate phosphoribosyltransferase;protein_id=OAX71747.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 45686 46294 . + . ID=gene-A3216_04135;Name=A3216_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04135 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 45686 46294 . + 0 ID=cds-OAX71714.1;Parent=gene-A3216_04135;Dbxref=NCBI_GP:OAX71714.1;Name=OAX71714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003933075.1;locus_tag=A3216_04135;product=cytochrome B;protein_id=OAX71714.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 46356 47225 . + . ID=gene-A3216_04140;Name=A3216_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04140 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 46356 47225 . + 0 ID=cds-OAX71715.1;Parent=gene-A3216_04140;Dbxref=NCBI_GP:OAX71715.1;Name=OAX71715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69583.2;locus_tag=A3216_04140;product=cytochrome C;protein_id=OAX71715.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 47222 48406 . + . ID=gene-A3216_04145;Name=A3216_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04145 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 47222 48406 . + 0 ID=cds-OAX71716.1;Parent=gene-A3216_04145;Dbxref=NCBI_GP:OAX71716.1;Name=OAX71716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907990.1;locus_tag=A3216_04145;product=menaquinol-cytochrome C reductase;protein_id=OAX71716.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 48403 50058 . + . ID=gene-A3216_04150;Name=A3216_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04150 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 48403 50058 . + 0 ID=cds-OAX71717.1;Parent=gene-A3216_04150;Dbxref=NCBI_GP:OAX71717.1;Name=OAX71717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P15878.3;locus_tag=A3216_04150;product=menaquinol-cytochrome C reductase;protein_id=OAX71717.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 50192 50830 . - . ID=gene-A3216_04155;Name=A3216_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04155 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 50192 50830 . - 0 ID=cds-OAX71718.1;Parent=gene-A3216_04155;Dbxref=NCBI_GP:OAX71718.1;Name=OAX71718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907988.1;locus_tag=A3216_04155;product=hypothetical protein;protein_id=OAX71718.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 50830 51711 . - . ID=gene-A3216_04160;Name=A3216_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04160 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 50830 51711 . - 0 ID=cds-OAX71719.1;Parent=gene-A3216_04160;Dbxref=NCBI_GP:OAX71719.1;Name=OAX71719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907987.1;locus_tag=A3216_04160;product=hypothetical protein;protein_id=OAX71719.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 51898 52317 . - . ID=gene-A3216_04165;Name=A3216_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04165 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 51898 52317 . - 0 ID=cds-OAX71720.1;Parent=gene-A3216_04165;Dbxref=NCBI_GP:OAX71720.1;Name=OAX71720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCF0.1;locus_tag=A3216_04165;product=cytochrome C oxidase subunit IV;protein_id=OAX71720.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 52370 53431 . - . ID=gene-A3216_04170;Name=A3216_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04170 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 52370 53431 . - 0 ID=cds-OAX71721.1;Parent=gene-A3216_04170;Dbxref=NCBI_GP:OAX71721.1;Name=OAX71721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCF1.1;locus_tag=A3216_04170;product=cytochrome C oxidase subunit II;protein_id=OAX71721.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 53625 55607 . + . ID=gene-A3216_04175;Name=A3216_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04175 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 53625 55607 . + 0 ID=cds-OAX71748.1;Parent=gene-A3216_04175;Dbxref=NCBI_GP:OAX71748.1;Name=OAX71748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014379955.1;locus_tag=A3216_04175;product=asparagine synthase (glutamine-hydrolyzing);protein_id=OAX71748.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 55790 56764 . - . ID=gene-A3216_04180;Name=A3216_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04180 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 55790 56764 . - 0 ID=cds-OAX71722.1;Parent=gene-A3216_04180;Dbxref=NCBI_GP:OAX71722.1;Name=OAX71722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007170828.1;locus_tag=A3216_04180;product=ribokinase;protein_id=OAX71722.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 56957 57598 . + . ID=gene-A3216_04185;Name=A3216_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04185 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 56957 57598 . + 0 ID=cds-OAX71723.1;Parent=gene-A3216_04185;Dbxref=NCBI_GP:OAX71723.1;Name=OAX71723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007770701.1;locus_tag=A3216_04185;product=hypothetical protein;protein_id=OAX71723.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 57633 57989 . - . ID=gene-A3216_04190;Name=A3216_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04190 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 57633 57989 . - 0 ID=cds-OAX71724.1;Parent=gene-A3216_04190;Dbxref=NCBI_GP:OAX71724.1;Name=OAX71724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008256050.1;locus_tag=A3216_04190;product=iron-sulfur cluster insertion protein ErpA;protein_id=OAX71724.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank pseudogene 58040 59196 . - . ID=gene-A3216_04195;Name=A3216_04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04195;pseudo=true GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 58040 59196 . - 0 ID=cds-A3216_04195;Parent=gene-A3216_04195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872275.1;locus_tag=A3216_04195;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 59323 60012 . + . ID=gene-A3216_04200;Name=A3216_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04200 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 59323 60012 . + 0 ID=cds-OAX71725.1;Parent=gene-A3216_04200;Dbxref=NCBI_GP:OAX71725.1;Name=OAX71725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015293527.1;locus_tag=A3216_04200;product=hypothetical protein;protein_id=OAX71725.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 60102 61157 . + . ID=gene-A3216_04205;Name=A3216_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04205 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 60102 61157 . + 0 ID=cds-OAX71726.1;Parent=gene-A3216_04205;Dbxref=NCBI_GP:OAX71726.1;Name=OAX71726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32953.1;locus_tag=A3216_04205;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=OAX71726.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 61504 61740 . + . ID=gene-A3216_04210;Name=A3216_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04210 GCA_001648835.1|LVXE01000007.1 GeneMarkS+ CDS 61504 61740 . + 0 ID=cds-OAX71727.1;Parent=gene-A3216_04210;Dbxref=NCBI_GP:OAX71727.1;Name=OAX71727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04210;product=hypothetical protein;protein_id=OAX71727.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 61926 63032 . - . ID=gene-A3216_04215;Name=A3216_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04215 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 61926 63032 . - 0 ID=cds-OAX71728.1;Parent=gene-A3216_04215;Dbxref=NCBI_GP:OAX71728.1;Name=OAX71728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019830626.1;locus_tag=A3216_04215;product=branched-chain amino acid aminotransferase;protein_id=OAX71728.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 63089 64192 . - . ID=gene-A3216_04220;Name=A3216_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04220 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 63089 64192 . - 0 ID=cds-OAX71729.1;Parent=gene-A3216_04220;Dbxref=NCBI_GP:OAX71729.1;Name=OAX71729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0QEZ6.1;locus_tag=A3216_04220;product=glycine cleavage system protein T;protein_id=OAX71729.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 64359 65927 . + . ID=gene-A3216_04225;Name=A3216_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04225 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 64359 65927 . + 0 ID=cds-OAX71730.1;Parent=gene-A3216_04225;Dbxref=NCBI_GP:OAX71730.1;Name=OAX71730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HGY2.1;locus_tag=A3216_04225;product=leucyl aminopeptidase;protein_id=OAX71730.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 65998 66312 . - . ID=gene-A3216_04230;Name=A3216_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04230 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 65998 66312 . - 0 ID=cds-OAX71731.1;Parent=gene-A3216_04230;Dbxref=NCBI_GP:OAX71731.1;Name=OAX71731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907975.1;locus_tag=A3216_04230;product=hypothetical protein;protein_id=OAX71731.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 66470 68260 . - . ID=gene-A3216_04235;Name=A3216_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04235 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 66470 68260 . - 0 ID=cds-OAX71732.1;Parent=gene-A3216_04235;Dbxref=NCBI_GP:OAX71732.1;Name=OAX71732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014384548.1;locus_tag=A3216_04235;product=short chain dehydrogenase;protein_id=OAX71732.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 68500 70092 . + . ID=gene-A3216_04240;Name=A3216_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04240 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 68500 70092 . + 0 ID=cds-OAX71733.1;Parent=gene-A3216_04240;Dbxref=NCBI_GP:OAX71733.1;Name=OAX71733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907973.1;locus_tag=A3216_04240;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=OAX71733.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 70108 71031 . + . ID=gene-A3216_04245;Name=A3216_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04245 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 70108 71031 . + 0 ID=cds-OAX71734.1;Parent=gene-A3216_04245;Dbxref=NCBI_GP:OAX71734.1;Name=OAX71734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32960.1;locus_tag=A3216_04245;product=TIGR01777 family protein;protein_id=OAX71734.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 71096 71803 . + . ID=gene-A3216_04250;Name=A3216_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04250 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 71096 71803 . + 0 ID=cds-OAX71735.1;Parent=gene-A3216_04250;Dbxref=NCBI_GP:OAX71735.1;Name=OAX71735.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32961.1;locus_tag=A3216_04250;product=lipoate-protein ligase B;protein_id=OAX71735.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 71800 72744 . + . ID=gene-A3216_04255;Name=A3216_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04255 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 71800 72744 . + 0 ID=cds-OAX71736.1;Parent=gene-A3216_04255;Dbxref=NCBI_GP:OAX71736.1;Name=OAX71736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O32962.1;locus_tag=A3216_04255;product=lipoyl synthase;protein_id=OAX71736.1;transl_table=11 GCA_001648835.1|LVXE01000007.1 Genbank gene 72771 73523 . + . ID=gene-A3216_04260;Name=A3216_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04260 GCA_001648835.1|LVXE01000007.1 Protein Homology CDS 72771 73523 . + 0 ID=cds-OAX71737.1;Parent=gene-A3216_04260;Dbxref=NCBI_GP:OAX71737.1;Name=OAX71737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014816447.1;locus_tag=A3216_04260;product=hypothetical protein;protein_id=OAX71737.1;transl_table=11 ##sequence-region LVXE01000070.1 1 13322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000070.1 Genbank region 1 13322 . + . ID=LVXE01000070.1:1..13322;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000070.1 Genbank pseudogene 1 3407 . - . ID=gene-A3216_13010;Name=A3216_13010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13010;pseudo=true GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 1 3407 . - 0 ID=cds-A3216_13010;Parent=gene-A3216_13010;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907554.1;locus_tag=A3216_13010;product=polyketide synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 3430 5553 . - . ID=gene-A3216_13015;Name=A3216_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13015 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 3430 5553 . - 0 ID=cds-OAX70255.1;Parent=gene-A3216_13015;Dbxref=NCBI_GP:OAX70255.1;Name=OAX70255.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907553.1;locus_tag=A3216_13015;product=acyl-CoA synthetase;protein_id=OAX70255.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 5692 6324 . - . ID=gene-A3216_13020;Name=A3216_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13020 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 5692 6324 . - 0 ID=cds-OAX70256.1;Parent=gene-A3216_13020;Dbxref=NCBI_GP:OAX70256.1;Name=OAX70256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD83.1;locus_tag=A3216_13020;product=chorismate--pyruvate lyase;protein_id=OAX70256.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 6368 8227 . - . ID=gene-A3216_13025;Name=A3216_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13025 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 6368 8227 . - 0 ID=cds-OAX70257.1;Parent=gene-A3216_13025;Dbxref=NCBI_GP:OAX70257.1;Name=OAX70257.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355156.1;locus_tag=A3216_13025;product=acyl-CoA synthetase;protein_id=OAX70257.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 8991 10139 . - . ID=gene-A3216_13030;Name=A3216_13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13030 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 8991 10139 . - 0 ID=cds-OAX70258.1;Parent=gene-A3216_13030;Dbxref=NCBI_GP:OAX70258.1;Name=OAX70258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD85.1;locus_tag=A3216_13030;product=photosystem I reaction center subunit VIII;protein_id=OAX70258.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 10302 11114 . + . ID=gene-A3216_13035;Name=A3216_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13035 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 10302 11114 . + 0 ID=cds-OAX70259.1;Parent=gene-A3216_13035;Dbxref=NCBI_GP:OAX70259.1;Name=OAX70259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD86.1;locus_tag=A3216_13035;product=SAM-dependent methyltransferase;protein_id=OAX70259.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank gene 11154 12410 . + . ID=gene-A3216_13040;Name=A3216_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13040 GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 11154 12410 . + 0 ID=cds-OAX70260.1;Parent=gene-A3216_13040;Dbxref=NCBI_GP:OAX70260.1;Name=OAX70260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7TXK2.1;locus_tag=A3216_13040;product=enoyl-ACP reductase;protein_id=OAX70260.1;transl_table=11 GCA_001648835.1|LVXE01000070.1 Genbank pseudogene 12657 13322 . - . ID=gene-A3216_13045;Name=A3216_13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13045;pseudo=true GCA_001648835.1|LVXE01000070.1 Protein Homology CDS 12657 13322 . - 0 ID=cds-A3216_13045;Parent=gene-A3216_13045;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907547.1;locus_tag=A3216_13045;product=glycosyl transferase family 1;pseudo=true;transl_table=11 ##sequence-region LVXE01000071.1 1 20247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000071.1 Genbank region 1 20247 . + . ID=LVXE01000071.1:1..20247;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000071.1 Genbank gene 295 588 . + . ID=gene-A3216_13050;Name=A3216_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13050 GCA_001648835.1|LVXE01000071.1 GeneMarkS+ CDS 295 588 . + 0 ID=cds-OAX70237.1;Parent=gene-A3216_13050;Dbxref=NCBI_GP:OAX70237.1;Name=OAX70237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13050;product=hypothetical protein;protein_id=OAX70237.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 910 1083 . + . ID=gene-A3216_13055;Name=A3216_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13055 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 910 1083 . + 0 ID=cds-OAX70238.1;Parent=gene-A3216_13055;Dbxref=NCBI_GP:OAX70238.1;Name=OAX70238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A4T6T4.1;locus_tag=A3216_13055;product=50S ribosomal protein L32;protein_id=OAX70238.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 1204 1890 . + . ID=gene-A3216_13060;Name=A3216_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13060 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 1204 1890 . + 0 ID=cds-OAX70251.1;Parent=gene-A3216_13060;Dbxref=NCBI_GP:OAX70251.1;Name=OAX70251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014588181.1;locus_tag=A3216_13060;product=DNA-binding response regulator;protein_id=OAX70251.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 1890 3449 . + . ID=gene-A3216_13065;Name=A3216_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13065 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 1890 3449 . + 0 ID=cds-OAX70239.1;Parent=gene-A3216_13065;Dbxref=NCBI_GP:OAX70239.1;Name=OAX70239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975239.1;locus_tag=A3216_13065;product=two-component sensor histidine kinase;protein_id=OAX70239.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 3727 4875 . + . ID=gene-A3216_13070;Name=A3216_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13070 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 3727 4875 . + 0 ID=cds-OAX70252.1;Parent=gene-A3216_13070;Dbxref=NCBI_GP:OAX70252.1;Name=OAX70252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907577.1;locus_tag=A3216_13070;product=serine protease;protein_id=OAX70252.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 4946 5443 . + . ID=gene-A3216_13075;Name=A3216_13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13075 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 4946 5443 . + 0 ID=cds-OAX70253.1;Parent=gene-A3216_13075;Dbxref=NCBI_GP:OAX70253.1;Name=OAX70253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254072.1;locus_tag=A3216_13075;product=molybdenum cofactor biosynthesis protein;protein_id=OAX70253.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 5460 5924 . - . ID=gene-A3216_13080;Name=A3216_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13080 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 5460 5924 . - 0 ID=cds-OAX70240.1;Parent=gene-A3216_13080;Dbxref=NCBI_GP:OAX70240.1;Name=OAX70240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5G4.1;locus_tag=A3216_13080;product=large-conductance mechanosensitive channel;protein_id=OAX70240.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank pseudogene 6015 6615 . - . ID=gene-A3216_13085;Name=A3216_13085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13085;pseudo=true GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 6015 6615 . - 0 ID=cds-A3216_13085;Parent=gene-A3216_13085;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009957807.1;locus_tag=A3216_13085;product=flagellar biosynthesis protein FlgA;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 6722 7021 . - . ID=gene-A3216_13090;Name=A3216_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13090 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 6722 7021 . - 0 ID=cds-OAX70254.1;Parent=gene-A3216_13090;Dbxref=NCBI_GP:OAX70254.1;Name=OAX70254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907580.1;locus_tag=A3216_13090;product=FmdB family transcriptional regulator;protein_id=OAX70254.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 7096 7689 . - . ID=gene-A3216_13095;Name=A3216_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13095 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 7096 7689 . - 0 ID=cds-OAX70241.1;Parent=gene-A3216_13095;Dbxref=NCBI_GP:OAX70241.1;Name=OAX70241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907581.1;locus_tag=A3216_13095;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=OAX70241.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 7767 8687 . + . ID=gene-A3216_13100;Name=A3216_13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13100 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 7767 8687 . + 0 ID=cds-OAX70242.1;Parent=gene-A3216_13100;Dbxref=NCBI_GP:OAX70242.1;Name=OAX70242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907582.1;locus_tag=A3216_13100;product=UDP-glucose pyrophosphorylase;protein_id=OAX70242.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 8775 10049 . + . ID=gene-A3216_13105;Name=A3216_13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13105 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 8775 10049 . + 0 ID=cds-OAX70243.1;Parent=gene-A3216_13105;Dbxref=NCBI_GP:OAX70243.1;Name=OAX70243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941349.1;locus_tag=A3216_13105;product=molybdopterin molybdenumtransferase;protein_id=OAX70243.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 10071 10724 . + . ID=gene-A3216_13110;Name=A3216_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13110 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 10071 10724 . + 0 ID=cds-OAX70244.1;Parent=gene-A3216_13110;Dbxref=NCBI_GP:OAX70244.1;Name=OAX70244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010949026.1;locus_tag=A3216_13110;product=GCN5 family acetyltransferase;protein_id=OAX70244.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 10894 11922 . + . ID=gene-A3216_13115;Name=A3216_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13115 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 10894 11922 . + 0 ID=cds-OAX70245.1;Parent=gene-A3216_13115;Dbxref=NCBI_GP:OAX70245.1;Name=OAX70245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907585.1;locus_tag=A3216_13115;product=hypothetical protein;protein_id=OAX70245.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 11978 12050 . + . ID=gene-A3216_13120;Name=A3216_13120;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_13120 GCA_001648835.1|LVXE01000071.1 tRNAscan-SE tRNA 11978 12050 . + . ID=rna-A3216_13120;Parent=gene-A3216_13120;anticodon=(pos:12011..12013);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_13120;product=tRNA-Ala GCA_001648835.1|LVXE01000071.1 tRNAscan-SE exon 11978 12050 . + . ID=exon-A3216_13120-1;Parent=rna-A3216_13120;anticodon=(pos:12011..12013);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_13120;product=tRNA-Ala GCA_001648835.1|LVXE01000071.1 Genbank gene 12707 13057 . - . ID=gene-A3216_13125;Name=A3216_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13125 GCA_001648835.1|LVXE01000071.1 GeneMarkS+ CDS 12707 13057 . - 0 ID=cds-OAX70246.1;Parent=gene-A3216_13125;Dbxref=NCBI_GP:OAX70246.1;Name=OAX70246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13125;product=hypothetical protein;protein_id=OAX70246.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 13331 14392 . + . ID=gene-A3216_13130;Name=A3216_13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13130 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 13331 14392 . + 0 ID=cds-OAX70247.1;Parent=gene-A3216_13130;Dbxref=NCBI_GP:OAX70247.1;Name=OAX70247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907586.1;locus_tag=A3216_13130;product=acetyltransferase;protein_id=OAX70247.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank pseudogene 14436 15043 . + . ID=gene-A3216_13135;Name=A3216_13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13135;pseudo=true GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 14436 15043 . + 0 ID=cds-A3216_13135;Parent=gene-A3216_13135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872787.1;locus_tag=A3216_13135;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank pseudogene 15109 15771 . + . ID=gene-A3216_13140;Name=A3216_13140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13140;pseudo=true GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 15109 15771 . + 0 ID=cds-A3216_13140;Parent=gene-A3216_13140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003872786.1;locus_tag=A3216_13140;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 15798 16415 . - . ID=gene-A3216_13145;Name=A3216_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13145 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 15798 16415 . - 0 ID=cds-OAX70248.1;Parent=gene-A3216_13145;Dbxref=NCBI_GP:OAX70248.1;Name=OAX70248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907588.1;locus_tag=A3216_13145;product=DNA repair protein;protein_id=OAX70248.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 17708 19294 . - . ID=gene-A3216_13150;Name=A3216_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13150 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 17708 19294 . - 0 ID=cds-OAX70249.1;Parent=gene-A3216_13150;Dbxref=NCBI_GP:OAX70249.1;Name=OAX70249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009975266.1;locus_tag=A3216_13150;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=OAX70249.1;transl_table=11 GCA_001648835.1|LVXE01000071.1 Genbank gene 19319 20164 . + . ID=gene-A3216_13155;Name=A3216_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13155 GCA_001648835.1|LVXE01000071.1 Protein Homology CDS 19319 20164 . + 0 ID=cds-OAX70250.1;Parent=gene-A3216_13155;Dbxref=NCBI_GP:OAX70250.1;Name=OAX70250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907590.1;locus_tag=A3216_13155;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=OAX70250.1;transl_table=11 ##sequence-region LVXE01000072.1 1 11849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000072.1 Genbank region 1 11849 . + . ID=LVXE01000072.1:1..11849;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000072.1 Genbank pseudogene 139 894 . - . ID=gene-A3216_13160;Name=A3216_13160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13160;pseudo=true GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 139 894 . - 0 ID=cds-A3216_13160;Parent=gene-A3216_13160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003878542.1;locus_tag=A3216_13160;product=dienelactone hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 951 1724 . - . ID=gene-A3216_13165;Name=A3216_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13165 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 951 1724 . - 0 ID=cds-OAX70227.1;Parent=gene-A3216_13165;Dbxref=NCBI_GP:OAX70227.1;Name=OAX70227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908632.1;locus_tag=A3216_13165;product=hypothetical protein;protein_id=OAX70227.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 1804 2790 . + . ID=gene-A3216_13170;Name=A3216_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13170 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 1804 2790 . + 0 ID=cds-OAX70235.1;Parent=gene-A3216_13170;Dbxref=NCBI_GP:OAX70235.1;Name=OAX70235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013827993.1;locus_tag=A3216_13170;product=fructose-1%2C6-bisphosphatase%2C class II;protein_id=OAX70235.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 2817 4223 . + . ID=gene-A3216_13175;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=A3216_13175 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 2817 4223 . + 0 ID=cds-OAX70228.1;Parent=gene-A3216_13175;Dbxref=NCBI_GP:OAX70228.1;Name=OAX70228.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908634.1;locus_tag=A3216_13175;product=aspartate ammonia-lyase;protein_id=OAX70228.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 4709 4990 . + . ID=gene-A3216_13180;Name=A3216_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13180 GCA_001648835.1|LVXE01000072.1 GeneMarkS+ CDS 4709 4990 . + 0 ID=cds-OAX70229.1;Parent=gene-A3216_13180;Dbxref=NCBI_GP:OAX70229.1;Name=OAX70229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13180;product=hypothetical protein;protein_id=OAX70229.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 5452 5811 . - . ID=gene-A3216_13185;Name=A3216_13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13185 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 5452 5811 . - 0 ID=cds-OAX70230.1;Parent=gene-A3216_13185;Dbxref=NCBI_GP:OAX70230.1;Name=OAX70230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908635.1;locus_tag=A3216_13185;product=hypothetical protein;protein_id=OAX70230.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 5864 6739 . - . ID=gene-A3216_13190;Name=A3216_13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13190 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 5864 6739 . - 0 ID=cds-OAX70231.1;Parent=gene-A3216_13190;Dbxref=NCBI_GP:OAX70231.1;Name=OAX70231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381966.1;locus_tag=A3216_13190;product=carbohydrate degradation protein;protein_id=OAX70231.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 6794 8095 . - . ID=gene-A3216_13195;Name=A3216_13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13195 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 6794 8095 . - 0 ID=cds-OAX70232.1;Parent=gene-A3216_13195;Dbxref=NCBI_GP:OAX70232.1;Name=OAX70232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908637.1;locus_tag=A3216_13195;product=ATP-binding protein;protein_id=OAX70232.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 8445 9272 . - . ID=gene-A3216_13200;Name=A3216_13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13200 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 8445 9272 . - 0 ID=cds-OAX70233.1;Parent=gene-A3216_13200;Dbxref=NCBI_GP:OAX70233.1;Name=OAX70233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908638.1;locus_tag=A3216_13200;product=acyl-ACP desaturase;protein_id=OAX70233.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 9329 10609 . - . ID=gene-A3216_13205;Name=A3216_13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13205 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 9329 10609 . - 0 ID=cds-OAX70236.1;Parent=gene-A3216_13205;Dbxref=NCBI_GP:OAX70236.1;Name=OAX70236.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008254337.1;locus_tag=A3216_13205;product=serine hydroxymethyltransferase;protein_id=OAX70236.1;transl_table=11 GCA_001648835.1|LVXE01000072.1 Genbank gene 10738 11676 . + . ID=gene-A3216_13210;Name=A3216_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13210 GCA_001648835.1|LVXE01000072.1 Protein Homology CDS 10738 11676 . + 0 ID=cds-OAX70234.1;Parent=gene-A3216_13210;Dbxref=NCBI_GP:OAX70234.1;Name=OAX70234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908640.1;locus_tag=A3216_13210;product=type I pantothenate kinase;protein_id=OAX70234.1;transl_table=11 ##sequence-region LVXE01000073.1 1 11722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000073.1 Genbank region 1 11722 . + . ID=LVXE01000073.1:1..11722;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000073.1 Genbank gene 849 1136 . - . ID=gene-A3216_13215;Name=A3216_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13215 GCA_001648835.1|LVXE01000073.1 GeneMarkS+ CDS 849 1136 . - 0 ID=cds-OAX70218.1;Parent=gene-A3216_13215;Dbxref=NCBI_GP:OAX70218.1;Name=OAX70218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13215;product=hypothetical protein;protein_id=OAX70218.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 1636 2976 . + . ID=gene-A3216_13220;Name=A3216_13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13220 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 1636 2976 . + 0 ID=cds-OAX70226.1;Parent=gene-A3216_13220;Dbxref=NCBI_GP:OAX70226.1;Name=OAX70226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46716.1;locus_tag=A3216_13220;product=glutamate-1-semialdehyde-2%2C1-aminomutase;protein_id=OAX70226.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 2976 3584 . + . ID=gene-A3216_13225;Name=A3216_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13225 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 2976 3584 . + 0 ID=cds-OAX70219.1;Parent=gene-A3216_13225;Dbxref=NCBI_GP:OAX70219.1;Name=OAX70219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908882.1;locus_tag=A3216_13225;product=hypothetical protein;protein_id=OAX70219.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 3581 4249 . + . ID=gene-A3216_13230;Name=A3216_13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13230 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 3581 4249 . + 0 ID=cds-OAX70220.1;Parent=gene-A3216_13230;Dbxref=NCBI_GP:OAX70220.1;Name=OAX70220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908881.1;locus_tag=A3216_13230;product=alkyl hydroperoxide reductase;protein_id=OAX70220.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 4246 5034 . + . ID=gene-A3216_13235;Name=A3216_13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13235 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 4246 5034 . + 0 ID=cds-OAX70221.1;Parent=gene-A3216_13235;Dbxref=NCBI_GP:OAX70221.1;Name=OAX70221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768165.1;locus_tag=A3216_13235;product=cytochrome C biogenesis protein ResC;protein_id=OAX70221.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 5034 6659 . + . ID=gene-A3216_13240;Name=A3216_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13240 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 5034 6659 . + 0 ID=cds-OAX70222.1;Parent=gene-A3216_13240;Dbxref=NCBI_GP:OAX70222.1;Name=OAX70222.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007167685.1;locus_tag=A3216_13240;product=cytochrome C biogenesis protein ResB;protein_id=OAX70222.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 6656 7639 . + . ID=gene-A3216_13245;Name=A3216_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13245 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 6656 7639 . + 0 ID=cds-OAX70223.1;Parent=gene-A3216_13245;Dbxref=NCBI_GP:OAX70223.1;Name=OAX70223.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908878.1;locus_tag=A3216_13245;product=c-type cytochrome biogenesis protein CcsB;protein_id=OAX70223.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 8995 9330 . + . ID=gene-A3216_13250;Name=A3216_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13250 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 8995 9330 . + 0 ID=cds-OAX70224.1;Parent=gene-A3216_13250;Dbxref=NCBI_GP:OAX70224.1;Name=OAX70224.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908877.1;locus_tag=A3216_13250;product=hypothetical protein;protein_id=OAX70224.1;transl_table=11 GCA_001648835.1|LVXE01000073.1 Genbank gene 9398 10282 . - . ID=gene-A3216_13255;Name=A3216_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13255 GCA_001648835.1|LVXE01000073.1 Protein Homology CDS 9398 10282 . - 0 ID=cds-OAX70225.1;Parent=gene-A3216_13255;Dbxref=NCBI_GP:OAX70225.1;Name=OAX70225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O07134.1;locus_tag=A3216_13255;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=OAX70225.1;transl_table=11 ##sequence-region LVXE01000074.1 1 11467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000074.1 Genbank region 1 11467 . + . ID=LVXE01000074.1:1..11467;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000074.1 Genbank pseudogene 1 333 . + . ID=gene-A3216_13260;Name=A3216_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13260;pseudo=true GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 1 333 . + 0 ID=cds-A3216_13260;Parent=gene-A3216_13260;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia%3B incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13260;product=amidase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank pseudogene 1009 1498 . - . ID=gene-A3216_13265;Name=A3216_13265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13265;pseudo=true GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 1009 1498 . - 0 ID=cds-A3216_13265;Parent=gene-A3216_13265;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010949629.1;locus_tag=A3216_13265;product=DNA-deoxyinosine glycosylase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 3003 3218 . + . ID=gene-A3216_13270;Name=A3216_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13270 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 3003 3218 . + 0 ID=cds-OAX70207.1;Parent=gene-A3216_13270;Dbxref=NCBI_GP:OAX70207.1;Name=OAX70207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13270;product=hypothetical protein;protein_id=OAX70207.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 3222 3557 . + . ID=gene-A3216_13275;Name=A3216_13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13275 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 3222 3557 . + 0 ID=cds-OAX70208.1;Parent=gene-A3216_13275;Dbxref=NCBI_GP:OAX70208.1;Name=OAX70208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13275;product=hypothetical protein;protein_id=OAX70208.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 4357 4560 . + . ID=gene-A3216_13280;Name=A3216_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13280 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 4357 4560 . + 0 ID=cds-OAX70209.1;Parent=gene-A3216_13280;Dbxref=NCBI_GP:OAX70209.1;Name=OAX70209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13280;product=hypothetical protein;protein_id=OAX70209.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank pseudogene 4578 4816 . + . ID=gene-A3216_13285;Name=A3216_13285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13285;pseudo=true GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 4578 4816 . + 0 ID=cds-A3216_13285;Parent=gene-A3216_13285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003911468.1;locus_tag=A3216_13285;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 5183 7066 . - . ID=gene-A3216_13290;Name=A3216_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13290 GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 5183 7066 . - 0 ID=cds-OAX70210.1;Parent=gene-A3216_13290;Dbxref=NCBI_GP:OAX70210.1;Name=OAX70210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003915915.1;locus_tag=A3216_13290;product=ABC transporter ATP-binding protein;protein_id=OAX70210.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 7069 8823 . - . ID=gene-A3216_13295;Name=A3216_13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13295 GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 7069 8823 . - 0 ID=cds-OAX70216.1;Parent=gene-A3216_13295;Dbxref=NCBI_GP:OAX70216.1;Name=OAX70216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908135.1;locus_tag=A3216_13295;product=ABC transporter ATP-binding protein;protein_id=OAX70216.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 8840 9019 . + . ID=gene-A3216_13300;Name=A3216_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13300 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 8840 9019 . + 0 ID=cds-OAX70211.1;Parent=gene-A3216_13300;Dbxref=NCBI_GP:OAX70211.1;Name=OAX70211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13300;product=hypothetical protein;protein_id=OAX70211.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 9009 9575 . + . ID=gene-A3216_13305;Name=A3216_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13305 GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 9009 9575 . + 0 ID=cds-OAX70212.1;Parent=gene-A3216_13305;Dbxref=NCBI_GP:OAX70212.1;Name=OAX70212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875581.1;locus_tag=A3216_13305;product=hypothetical protein;protein_id=OAX70212.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 9584 10147 . + . ID=gene-A3216_13310;Name=A3216_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13310 GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 9584 10147 . + 0 ID=cds-OAX70215.1;Parent=gene-A3216_13310;Dbxref=NCBI_GP:OAX70215.1;Name=OAX70215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908137.1;locus_tag=A3216_13310;product=hypothetical protein;protein_id=OAX70215.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 10155 10640 . - . ID=gene-A3216_13315;Name=A3216_13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13315 GCA_001648835.1|LVXE01000074.1 Protein Homology CDS 10155 10640 . - 0 ID=cds-OAX70217.1;Parent=gene-A3216_13315;Dbxref=NCBI_GP:OAX70217.1;Name=OAX70217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CC85.1;locus_tag=A3216_13315;product=hypothetical protein;protein_id=OAX70217.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 10800 11012 . - . ID=gene-A3216_13320;Name=A3216_13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13320 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 10800 11012 . - 0 ID=cds-OAX70213.1;Parent=gene-A3216_13320;Dbxref=NCBI_GP:OAX70213.1;Name=OAX70213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13320;product=hypothetical protein;protein_id=OAX70213.1;transl_table=11 GCA_001648835.1|LVXE01000074.1 Genbank gene 11067 11351 . - . ID=gene-A3216_13325;Name=A3216_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13325 GCA_001648835.1|LVXE01000074.1 GeneMarkS+ CDS 11067 11351 . - 0 ID=cds-OAX70214.1;Parent=gene-A3216_13325;Dbxref=NCBI_GP:OAX70214.1;Name=OAX70214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13325;product=hypothetical protein;protein_id=OAX70214.1;transl_table=11 ##sequence-region LVXE01000075.1 1 11194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000075.1 Genbank region 1 11194 . + . ID=LVXE01000075.1:1..11194;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000075.1 Genbank gene 1 1934 . + . ID=gene-A3216_13330;Name=A3216_13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13330;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 1 1934 . + 2 ID=cds-OAX70198.1;Parent=gene-A3216_13330;Dbxref=NCBI_GP:OAX70198.1;Name=OAX70198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5I9.1;locus_tag=A3216_13330;partial=true;product=translation initiation factor IF-2;protein_id=OAX70198.1;start_range=.,1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 1948 2442 . + . ID=gene-A3216_13335;Name=A3216_13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13335 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 1948 2442 . + 0 ID=cds-OAX70199.1;Parent=gene-A3216_13335;Dbxref=NCBI_GP:OAX70199.1;Name=OAX70199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5I8.1;locus_tag=A3216_13335;product=ribosome-binding factor A;protein_id=OAX70199.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank pseudogene 2435 3397 . + . ID=gene-A3216_13340;Name=A3216_13340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13340;pseudo=true GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 2435 3397 . + 0 ID=cds-A3216_13340;Parent=gene-A3216_13340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003914731.1;locus_tag=A3216_13340;product=phosphoesterase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 3427 4869 . - . ID=gene-A3216_13345;Name=A3216_13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13345 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 3427 4869 . - 0 ID=cds-OAX70200.1;Parent=gene-A3216_13345;Dbxref=NCBI_GP:OAX70200.1;Name=OAX70200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5I7.2;locus_tag=A3216_13345;product=proline--tRNA ligase;protein_id=OAX70200.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 5522 5764 . + . ID=gene-A3216_13350;Name=A3216_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13350 GCA_001648835.1|LVXE01000075.1 GeneMarkS+ CDS 5522 5764 . + 0 ID=cds-OAX70201.1;Parent=gene-A3216_13350;Dbxref=NCBI_GP:OAX70201.1;Name=OAX70201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13350;product=hypothetical protein;protein_id=OAX70201.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 6467 6670 . + . ID=gene-A3216_13355;Name=A3216_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13355 GCA_001648835.1|LVXE01000075.1 GeneMarkS+ CDS 6467 6670 . + 0 ID=cds-OAX70202.1;Parent=gene-A3216_13355;Dbxref=NCBI_GP:OAX70202.1;Name=OAX70202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13355;product=hypothetical protein;protein_id=OAX70202.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 6994 7296 . - . ID=gene-A3216_13360;Name=A3216_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13360 GCA_001648835.1|LVXE01000075.1 GeneMarkS+ CDS 6994 7296 . - 0 ID=cds-OAX70203.1;Parent=gene-A3216_13360;Dbxref=NCBI_GP:OAX70203.1;Name=OAX70203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13360;product=hypothetical protein;protein_id=OAX70203.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank pseudogene 7773 8355 . - . ID=gene-A3216_13365;Name=A3216_13365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13365;pseudo=true GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 7773 8355 . - 0 ID=cds-A3216_13365;Parent=gene-A3216_13365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007171487.1;locus_tag=A3216_13365;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 8526 9473 . + . ID=gene-A3216_13370;Name=A3216_13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13370 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 8526 9473 . + 0 ID=cds-OAX70206.1;Parent=gene-A3216_13370;Dbxref=NCBI_GP:OAX70206.1;Name=OAX70206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005148704.1;locus_tag=A3216_13370;product=metallophosphoesterase;protein_id=OAX70206.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 9470 10153 . + . ID=gene-A3216_13375;Name=A3216_13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13375 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 9470 10153 . + 0 ID=cds-OAX70204.1;Parent=gene-A3216_13375;Dbxref=NCBI_GP:OAX70204.1;Name=OAX70204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908398.1;locus_tag=A3216_13375;product=4'-phosphopantetheinyl transferase;protein_id=OAX70204.1;transl_table=11 GCA_001648835.1|LVXE01000075.1 Genbank gene 10150 11112 . + . ID=gene-A3216_13380;Name=A3216_13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13380 GCA_001648835.1|LVXE01000075.1 Protein Homology CDS 10150 11112 . + 0 ID=cds-OAX70205.1;Parent=gene-A3216_13380;Dbxref=NCBI_GP:OAX70205.1;Name=OAX70205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5I4.1;locus_tag=A3216_13380;product=tRNA pseudouridine(55) synthase TruB;protein_id=OAX70205.1;transl_table=11 ##sequence-region LVXE01000076.1 1 10741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000076.1 Genbank region 1 10741 . + . ID=LVXE01000076.1:1..10741;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000076.1 Genbank gene 352 564 . + . ID=gene-A3216_13385;Name=A3216_13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13385 GCA_001648835.1|LVXE01000076.1 GeneMarkS+ CDS 352 564 . + 0 ID=cds-OAX70187.1;Parent=gene-A3216_13385;Dbxref=NCBI_GP:OAX70187.1;Name=OAX70187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13385;product=hypothetical protein;protein_id=OAX70187.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 733 1044 . - . ID=gene-A3216_13390;Name=A3216_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13390 GCA_001648835.1|LVXE01000076.1 GeneMarkS+ CDS 733 1044 . - 0 ID=cds-OAX70188.1;Parent=gene-A3216_13390;Dbxref=NCBI_GP:OAX70188.1;Name=OAX70188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13390;product=hypothetical protein;protein_id=OAX70188.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 1131 1355 . - . ID=gene-A3216_13395;Name=A3216_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13395 GCA_001648835.1|LVXE01000076.1 GeneMarkS+ CDS 1131 1355 . - 0 ID=cds-OAX70189.1;Parent=gene-A3216_13395;Dbxref=NCBI_GP:OAX70189.1;Name=OAX70189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13395;product=hypothetical protein;protein_id=OAX70189.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 1360 1590 . - . ID=gene-A3216_13400;Name=A3216_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13400 GCA_001648835.1|LVXE01000076.1 GeneMarkS+ CDS 1360 1590 . - 0 ID=cds-OAX70190.1;Parent=gene-A3216_13400;Dbxref=NCBI_GP:OAX70190.1;Name=OAX70190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13400;product=hypothetical protein;protein_id=OAX70190.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 1770 2075 . - . ID=gene-A3216_13405;Name=A3216_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13405 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 1770 2075 . - 0 ID=cds-OAX70191.1;Parent=gene-A3216_13405;Dbxref=NCBI_GP:OAX70191.1;Name=OAX70191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908866.1;locus_tag=A3216_13405;product=hypothetical protein;protein_id=OAX70191.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 2072 2944 . - . ID=gene-A3216_13410;Name=A3216_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13410 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 2072 2944 . - 0 ID=cds-OAX70192.1;Parent=gene-A3216_13410;Dbxref=NCBI_GP:OAX70192.1;Name=OAX70192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908867.1;locus_tag=A3216_13410;product=mycothiol conjugate amidase Mca;protein_id=OAX70192.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 3049 3483 . + . ID=gene-A3216_13415;Name=A3216_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13415 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 3049 3483 . + 0 ID=cds-OAX70193.1;Parent=gene-A3216_13415;Dbxref=NCBI_GP:OAX70193.1;Name=OAX70193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908868.1;locus_tag=A3216_13415;product=hypothetical protein;protein_id=OAX70193.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 3707 4201 . + . ID=gene-A3216_13420;Name=A3216_13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13420 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 3707 4201 . + 0 ID=cds-OAX70194.1;Parent=gene-A3216_13420;Dbxref=NCBI_GP:OAX70194.1;Name=OAX70194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46808.2;locus_tag=A3216_13420;product=transcription elongation factor GreA;protein_id=OAX70194.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 4264 5430 . - . ID=gene-A3216_13425;Name=A3216_13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13425 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 4264 5430 . - 0 ID=cds-OAX70195.1;Parent=gene-A3216_13425;Dbxref=NCBI_GP:OAX70195.1;Name=OAX70195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46807.1;locus_tag=A3216_13425;product=cystathionine gamma-synthase;protein_id=OAX70195.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 5510 6259 . - . ID=gene-A3216_13430;Name=A3216_13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13430 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 5510 6259 . - 0 ID=cds-OAX70196.1;Parent=gene-A3216_13430;Dbxref=NCBI_GP:OAX70196.1;Name=OAX70196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P41484.2;locus_tag=A3216_13430;product=hypothetical protein;protein_id=OAX70196.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank gene 6409 7803 . - . ID=gene-A3216_13435;Name=A3216_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13435 GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 6409 7803 . - 0 ID=cds-OAX70197.1;Parent=gene-A3216_13435;Dbxref=NCBI_GP:OAX70197.1;Name=OAX70197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908872.1;locus_tag=A3216_13435;product=cystathionine beta-synthase;protein_id=OAX70197.1;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank pseudogene 7873 8931 . - . ID=gene-A3216_13440;Name=A3216_13440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13440;pseudo=true GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 7873 8931 . - 0 ID=cds-A3216_13440;Parent=gene-A3216_13440;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009935460.1;locus_tag=A3216_13440;product=esterase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000076.1 Genbank pseudogene 9216 10051 . + . ID=gene-A3216_13445;Name=A3216_13445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13445;pseudo=true GCA_001648835.1|LVXE01000076.1 Protein Homology CDS 9216 10051 . + 0 ID=cds-A3216_13445;Parent=gene-A3216_13445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014941396.1;locus_tag=A3216_13445;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000077.1 1 10674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000077.1 Genbank region 1 10674 . + . ID=LVXE01000077.1:1..10674;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000077.1 Genbank gene 3422 3691 . + . ID=gene-A3216_13450;Name=A3216_13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13450 GCA_001648835.1|LVXE01000077.1 GeneMarkS+ CDS 3422 3691 . + 0 ID=cds-OAX70183.1;Parent=gene-A3216_13450;Dbxref=NCBI_GP:OAX70183.1;Name=OAX70183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13450;product=hypothetical protein;protein_id=OAX70183.1;transl_table=11 GCA_001648835.1|LVXE01000077.1 Genbank gene 3704 4027 . + . ID=gene-A3216_13455;Name=A3216_13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13455 GCA_001648835.1|LVXE01000077.1 GeneMarkS+ CDS 3704 4027 . + 0 ID=cds-OAX70184.1;Parent=gene-A3216_13455;Dbxref=NCBI_GP:OAX70184.1;Name=OAX70184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13455;product=hypothetical protein;protein_id=OAX70184.1;transl_table=11 GCA_001648835.1|LVXE01000077.1 Genbank gene 7991 8230 . + . ID=gene-A3216_13460;Name=A3216_13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13460 GCA_001648835.1|LVXE01000077.1 GeneMarkS+ CDS 7991 8230 . + 0 ID=cds-OAX70185.1;Parent=gene-A3216_13460;Dbxref=NCBI_GP:OAX70185.1;Name=OAX70185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13460;product=hypothetical protein;protein_id=OAX70185.1;transl_table=11 GCA_001648835.1|LVXE01000077.1 Genbank gene 9726 10055 . - . ID=gene-A3216_13465;Name=A3216_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13465 GCA_001648835.1|LVXE01000077.1 GeneMarkS+ CDS 9726 10055 . - 0 ID=cds-OAX70186.1;Parent=gene-A3216_13465;Dbxref=NCBI_GP:OAX70186.1;Name=OAX70186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13465;product=hypothetical protein;protein_id=OAX70186.1;transl_table=11 ##sequence-region LVXE01000078.1 1 10456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000078.1 Genbank region 1 10456 . + . ID=LVXE01000078.1:1..10456;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000078.1 Genbank pseudogene 1 805 . - . ID=gene-A3216_13470;Name=A3216_13470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13470;pseudo=true GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 1 805 . - 0 ID=cds-A3216_13470;Parent=gene-A3216_13470;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381236.1;locus_tag=A3216_13470;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 958 1821 . - . ID=gene-A3216_13475;Name=A3216_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13475 GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 958 1821 . - 0 ID=cds-OAX70176.1;Parent=gene-A3216_13475;Dbxref=NCBI_GP:OAX70176.1;Name=OAX70176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908914.1;locus_tag=A3216_13475;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=OAX70176.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank pseudogene 2050 3326 . - . ID=gene-A3216_13480;Name=A3216_13480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13480;pseudo=true GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 2050 3326 . - 0 ID=cds-A3216_13480;Parent=gene-A3216_13480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007768323.1;locus_tag=A3216_13480;product=isocitrate lyase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 3623 4417 . - . ID=gene-A3216_13485;Name=A3216_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13485 GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 3623 4417 . - 0 ID=cds-OAX70177.1;Parent=gene-A3216_13485;Dbxref=NCBI_GP:OAX70177.1;Name=OAX70177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908915.1;locus_tag=A3216_13485;product=acyl-ACP thioesterase;protein_id=OAX70177.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank pseudogene 4596 6052 . + . ID=gene-A3216_13490;Name=A3216_13490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13490;pseudo=true GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 4596 6052 . + 0 ID=cds-A3216_13490;Parent=gene-A3216_13490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003892333.1;locus_tag=A3216_13490;product=Cro/Cl family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 6049 6615 . + . ID=gene-A3216_13495;Name=A3216_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13495 GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 6049 6615 . + 0 ID=cds-OAX70178.1;Parent=gene-A3216_13495;Dbxref=NCBI_GP:OAX70178.1;Name=OAX70178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908916.1;locus_tag=A3216_13495;product=4-carboxymuconolactone decarboxylase;protein_id=OAX70178.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank pseudogene 6920 7630 . - . ID=gene-A3216_13500;Name=A3216_13500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13500;pseudo=true GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 6920 7630 . - 0 ID=cds-A3216_13500;Parent=gene-A3216_13500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011738570.1;locus_tag=A3216_13500;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 7776 8564 . + . ID=gene-A3216_13505;Name=A3216_13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13505 GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 7776 8564 . + 0 ID=cds-OAX70182.1;Parent=gene-A3216_13505;Dbxref=NCBI_GP:OAX70182.1;Name=OAX70182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908917.1;locus_tag=A3216_13505;product=isoprenyl transferase;protein_id=OAX70182.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 8899 9279 . - . ID=gene-A3216_13510;Name=A3216_13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13510 GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 8899 9279 . - 0 ID=cds-OAX70179.1;Parent=gene-A3216_13510;Dbxref=NCBI_GP:OAX70179.1;Name=OAX70179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908918.1;locus_tag=A3216_13510;product=hypothetical protein;protein_id=OAX70179.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 9405 9590 . + . ID=gene-A3216_13515;Name=A3216_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13515 GCA_001648835.1|LVXE01000078.1 GeneMarkS+ CDS 9405 9590 . + 0 ID=cds-OAX70180.1;Parent=gene-A3216_13515;Dbxref=NCBI_GP:OAX70180.1;Name=OAX70180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13515;product=hypothetical protein;protein_id=OAX70180.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank gene 9678 10160 . + . ID=gene-A3216_13520;Name=A3216_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13520 GCA_001648835.1|LVXE01000078.1 GeneMarkS+ CDS 9678 10160 . + 0 ID=cds-OAX70181.1;Parent=gene-A3216_13520;Dbxref=NCBI_GP:OAX70181.1;Name=OAX70181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13520;product=hypothetical protein;protein_id=OAX70181.1;transl_table=11 GCA_001648835.1|LVXE01000078.1 Genbank pseudogene 10259 10396 . + . ID=gene-A3216_13525;Name=A3216_13525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13525;pseudo=true GCA_001648835.1|LVXE01000078.1 Protein Homology CDS 10259 10396 . + 0 ID=cds-A3216_13525;Parent=gene-A3216_13525;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907599.1;locus_tag=A3216_13525;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000079.1 1 10316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000079.1 Genbank region 1 10316 . + . ID=LVXE01000079.1:1..10316;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000079.1 Genbank gene 282 587 . - . ID=gene-A3216_13530;Name=A3216_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13530 GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 282 587 . - 0 ID=cds-OAX70172.1;Parent=gene-A3216_13530;Dbxref=NCBI_GP:OAX70172.1;Name=OAX70172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908865.1;locus_tag=A3216_13530;product=hypothetical protein;protein_id=OAX70172.1;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank gene 605 2008 . - . ID=gene-A3216_13535;Name=A3216_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13535 GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 605 2008 . - 0 ID=cds-OAX70173.1;Parent=gene-A3216_13535;Dbxref=NCBI_GP:OAX70173.1;Name=OAX70173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005624645.1;locus_tag=A3216_13535;product=dihydrolipoyl dehydrogenase;protein_id=OAX70173.1;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank pseudogene 3489 4745 . - . ID=gene-A3216_13540;Name=A3216_13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13540;pseudo=true GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 3489 4745 . - 0 ID=cds-A3216_13540;Parent=gene-A3216_13540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381244.1;locus_tag=A3216_13540;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank pseudogene 4846 6948 . + . ID=gene-A3216_13545;Name=A3216_13545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13545;pseudo=true GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 4846 6948 . + 0 ID=cds-A3216_13545;Parent=gene-A3216_13545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381245.1;locus_tag=A3216_13545;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank gene 7945 8406 . + . ID=gene-A3216_13550;Name=A3216_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13550 GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 7945 8406 . + 0 ID=cds-OAX70174.1;Parent=gene-A3216_13550;Dbxref=NCBI_GP:OAX70174.1;Name=OAX70174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908863.1;locus_tag=A3216_13550;product=hypothetical protein;protein_id=OAX70174.1;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank gene 8680 9009 . + . ID=gene-A3216_13555;Name=A3216_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13555 GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 8680 9009 . + 0 ID=cds-OAX70175.1;Parent=gene-A3216_13555;Dbxref=NCBI_GP:OAX70175.1;Name=OAX70175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908862.1;locus_tag=A3216_13555;product=hypothetical protein;protein_id=OAX70175.1;transl_table=11 GCA_001648835.1|LVXE01000079.1 Genbank pseudogene 9183 10316 . - . ID=gene-A3216_13560;Name=A3216_13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13560;pseudo=true GCA_001648835.1|LVXE01000079.1 Protein Homology CDS 9183 10316 . - 0 ID=cds-A3216_13560;Parent=gene-A3216_13560;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54881.1;locus_tag=A3216_13560;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000008.1 1 70755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000008.1 Genbank region 1 70755 . + . ID=LVXE01000008.1:1..70755;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000008.1 Genbank gene 32 274 . - . ID=gene-A3216_04265;Name=A3216_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04265 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 32 274 . - 0 ID=cds-OAX71632.1;Parent=gene-A3216_04265;Dbxref=NCBI_GP:OAX71632.1;Name=OAX71632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908248.1;locus_tag=A3216_04265;product=hypothetical protein;protein_id=OAX71632.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 1554 1775 . + . ID=gene-A3216_04270;Name=A3216_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04270 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 1554 1775 . + 0 ID=cds-OAX71633.1;Parent=gene-A3216_04270;Dbxref=NCBI_GP:OAX71633.1;Name=OAX71633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04270;product=hypothetical protein;protein_id=OAX71633.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 1772 2056 . + . ID=gene-A3216_04275;Name=A3216_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04275 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 1772 2056 . + 0 ID=cds-OAX71634.1;Parent=gene-A3216_04275;Dbxref=NCBI_GP:OAX71634.1;Name=OAX71634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04275;product=hypothetical protein;protein_id=OAX71634.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 3616 4209 . - . ID=gene-A3216_04280;Name=A3216_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04280 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 3616 4209 . - 0 ID=cds-OAX71635.1;Parent=gene-A3216_04280;Dbxref=NCBI_GP:OAX71635.1;Name=OAX71635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907804.1;locus_tag=A3216_04280;product=hypothetical protein;protein_id=OAX71635.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 4515 6299 . - . ID=gene-A3216_04285;Name=A3216_04285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04285;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 4515 6299 . - 0 ID=cds-A3216_04285;Parent=gene-A3216_04285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725410.1;locus_tag=A3216_04285;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 6625 6978 . + . ID=gene-A3216_04290;Name=A3216_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04290 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 6625 6978 . + 0 ID=cds-OAX71636.1;Parent=gene-A3216_04290;Dbxref=NCBI_GP:OAX71636.1;Name=OAX71636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04290;product=hypothetical protein;protein_id=OAX71636.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 7266 8243 . - . ID=gene-A3216_04295;Name=A3216_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04295 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 7266 8243 . - 0 ID=cds-OAX71677.1;Parent=gene-A3216_04295;Dbxref=NCBI_GP:OAX71677.1;Name=OAX71677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1T8K7.1;locus_tag=A3216_04295;product=DNA-binding protein WhiA;protein_id=OAX71677.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 8240 9319 . - . ID=gene-A3216_04300;Name=A3216_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04300 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 8240 9319 . - 0 ID=cds-OAX71637.1;Parent=gene-A3216_04300;Dbxref=NCBI_GP:OAX71637.1;Name=OAX71637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCN9.1;locus_tag=A3216_04300;product=hypothetical protein;protein_id=OAX71637.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 9316 10212 . - . ID=gene-A3216_04305;Name=A3216_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04305 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 9316 10212 . - 0 ID=cds-OAX71638.1;Parent=gene-A3216_04305;Dbxref=NCBI_GP:OAX71638.1;Name=OAX71638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCP0.1;locus_tag=A3216_04305;product=RNase adaptor protein RapZ;protein_id=OAX71638.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 10209 12152 . - . ID=gene-A3216_04310;Name=A3216_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04310 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 10209 12152 . - 0 ID=cds-OAX71639.1;Parent=gene-A3216_04310;Dbxref=NCBI_GP:OAX71639.1;Name=OAX71639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCP1.1;locus_tag=A3216_04310;product=excinuclease ABC subunit C;protein_id=OAX71639.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 12467 12937 . - . ID=gene-A3216_04315;Name=A3216_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04315 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 12467 12937 . - 0 ID=cds-OAX71640.1;Parent=gene-A3216_04315;Dbxref=NCBI_GP:OAX71640.1;Name=OAX71640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907799.1;locus_tag=A3216_04315;product=hypothetical protein;protein_id=OAX71640.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 12934 13416 . - . ID=gene-A3216_04320;Name=A3216_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04320 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 12934 13416 . - 0 ID=cds-OAX71641.1;Parent=gene-A3216_04320;Dbxref=NCBI_GP:OAX71641.1;Name=OAX71641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCP3.1;locus_tag=A3216_04320;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=OAX71641.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 13413 14690 . - . ID=gene-A3216_04325;Name=A3216_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04325 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 13413 14690 . - 0 ID=cds-OAX71678.1;Parent=gene-A3216_04325;Dbxref=NCBI_GP:OAX71678.1;Name=OAX71678.1;Note=bifunctional enzyme DHBP synthase/GTP cyclohydrolase II%3B functions in riboflavin synthesis%3B converts GTP to 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine%3B converts ribulose 5-phopshate to 3%2C4-dihydroxy-2-butanone 4-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005146249.1;locus_tag=A3216_04325;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II;protein_id=OAX71678.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 14847 15470 . - . ID=gene-A3216_04330;Name=A3216_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04330 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 14847 15470 . - 0 ID=cds-OAX71642.1;Parent=gene-A3216_04330;Dbxref=NCBI_GP:OAX71642.1;Name=OAX71642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907796.1;locus_tag=A3216_04330;product=riboflavin synthase subunit alpha;protein_id=OAX71642.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 15627 16343 . + . ID=gene-A3216_04335;Name=A3216_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04335 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 15627 16343 . + 0 ID=cds-OAX71679.1;Parent=gene-A3216_04335;Dbxref=NCBI_GP:OAX71679.1;Name=OAX71679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCP6.1;locus_tag=A3216_04335;product=hypothetical protein;protein_id=OAX71679.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 16343 17872 . + . ID=gene-A3216_04340;Name=A3216_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04340 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 16343 17872 . + 0 ID=cds-OAX71643.1;Parent=gene-A3216_04340;Dbxref=NCBI_GP:OAX71643.1;Name=OAX71643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907794.1;locus_tag=A3216_04340;product=MFS transporter;protein_id=OAX71643.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 17916 18935 . - . ID=gene-A3216_04345;Name=A3216_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04345 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 17916 18935 . - 0 ID=cds-OAX71644.1;Parent=gene-A3216_04345;Dbxref=NCBI_GP:OAX71644.1;Name=OAX71644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907793.1;locus_tag=A3216_04345;product=riboflavin biosynthesis protein RibD;protein_id=OAX71644.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 18932 19606 . - . ID=gene-A3216_04350;Name=A3216_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04350 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 18932 19606 . - 0 ID=cds-OAX71680.1;Parent=gene-A3216_04350;Dbxref=NCBI_GP:OAX71680.1;Name=OAX71680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCP9.1;locus_tag=A3216_04350;product=ribulose-phosphate 3-epimerase;protein_id=OAX71680.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 19654 20973 . - . ID=gene-A3216_04355;Name=A3216_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04355;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 19654 20973 . - 0 ID=cds-A3216_04355;Parent=gene-A3216_04355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011725428.1;locus_tag=A3216_04355;product=rRNA cytosine-C5-methyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 21063 22013 . - . ID=gene-A3216_04360;Name=A3216_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04360 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 21063 22013 . - 0 ID=cds-OAX71681.1;Parent=gene-A3216_04360;Dbxref=NCBI_GP:OAX71681.1;Name=OAX71681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HP60.1;locus_tag=A3216_04360;product=methionyl-tRNA formyltransferase;protein_id=OAX71681.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 22200 23024 . + . ID=gene-A3216_04365;Name=A3216_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04365 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 22200 23024 . + 0 ID=cds-OAX71645.1;Parent=gene-A3216_04365;Dbxref=NCBI_GP:OAX71645.1;Name=OAX71645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907790.1;locus_tag=A3216_04365;product=hypothetical protein;protein_id=OAX71645.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 23206 23691 . - . ID=gene-A3216_04370;Name=A3216_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04370 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 23206 23691 . - 0 ID=cds-OAX71646.1;Parent=gene-A3216_04370;Dbxref=NCBI_GP:OAX71646.1;Name=OAX71646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907789.1;locus_tag=A3216_04370;product=MarR family transcriptional regulator;protein_id=OAX71646.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 24807 26762 . - . ID=gene-A3216_04375;Name=A3216_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04375 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 24807 26762 . - 0 ID=cds-OAX71682.1;Parent=gene-A3216_04375;Dbxref=NCBI_GP:OAX71682.1;Name=OAX71682.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCQ3.1;locus_tag=A3216_04375;product=primosome assembly protein PriA;protein_id=OAX71682.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 27501 28491 . + . ID=gene-A3216_04380;Name=A3216_04380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04380;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 27501 28491 . + 0 ID=cds-A3216_04380;Parent=gene-A3216_04380;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015355814.1;locus_tag=A3216_04380;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 28519 29445 . + . ID=gene-A3216_04385;Name=A3216_04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04385;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 28519 29445 . + 0 ID=cds-A3216_04385;Parent=gene-A3216_04385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012393972.1;locus_tag=A3216_04385;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 29774 29971 . - . ID=gene-A3216_04390;Name=A3216_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04390 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 29774 29971 . - 0 ID=cds-OAX71647.1;Parent=gene-A3216_04390;Dbxref=NCBI_GP:OAX71647.1;Name=OAX71647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04390;product=hypothetical protein;protein_id=OAX71647.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 30090 31301 . - . ID=gene-A3216_04395;Name=A3216_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04395 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 30090 31301 . - 0 ID=cds-OAX71648.1;Parent=gene-A3216_04395;Dbxref=NCBI_GP:OAX71648.1;Name=OAX71648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B2HP50.1;locus_tag=A3216_04395;product=methionine adenosyltransferase;protein_id=OAX71648.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 31430 32689 . - . ID=gene-A3216_04400;Name=A3216_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04400 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 31430 32689 . - 0 ID=cds-OAX71649.1;Parent=gene-A3216_04400;Dbxref=NCBI_GP:OAX71649.1;Name=OAX71649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907786.1;locus_tag=A3216_04400;product=phosphopantothenate synthase;protein_id=OAX71649.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 32710 33042 . - . ID=gene-A3216_04405;Name=A3216_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04405 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 32710 33042 . - 0 ID=cds-OAX71650.1;Parent=gene-A3216_04405;Dbxref=NCBI_GP:OAX71650.1;Name=OAX71650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCQ6.1;locus_tag=A3216_04405;product=DNA-directed RNA polymerase subunit omega;protein_id=OAX71650.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 33124 33756 . - . ID=gene-A3216_04410;Name=A3216_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04410 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 33124 33756 . - 0 ID=cds-OAX71683.1;Parent=gene-A3216_04410;Dbxref=NCBI_GP:OAX71683.1;Name=OAX71683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCQ7.1;locus_tag=A3216_04410;product=guanylate kinase;protein_id=OAX71683.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 33810 34127 . - . ID=gene-A3216_04415;Name=A3216_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04415 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 33810 34127 . - 0 ID=cds-OAX71651.1;Parent=gene-A3216_04415;Dbxref=NCBI_GP:OAX71651.1;Name=OAX71651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907783.1;locus_tag=A3216_04415;product=integration host factor;protein_id=OAX71651.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 34578 34769 . - . ID=gene-A3216_04420;Name=A3216_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04420 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 34578 34769 . - 0 ID=cds-OAX71652.1;Parent=gene-A3216_04420;Dbxref=NCBI_GP:OAX71652.1;Name=OAX71652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04420;product=hypothetical protein;protein_id=OAX71652.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 34972 36588 . - . ID=gene-A3216_04425;Name=A3216_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04425 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 34972 36588 . - 0 ID=cds-OAX71653.1;Parent=gene-A3216_04425;Dbxref=NCBI_GP:OAX71653.1;Name=OAX71653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907782.1;locus_tag=A3216_04425;product=hypothetical protein;protein_id=OAX71653.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 36585 36893 . - . ID=gene-A3216_04430;Name=A3216_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04430 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 36585 36893 . - 0 ID=cds-OAX71654.1;Parent=gene-A3216_04430;Dbxref=NCBI_GP:OAX71654.1;Name=OAX71654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907781.1;locus_tag=A3216_04430;product=cell motility protein;protein_id=OAX71654.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 37180 38028 . - . ID=gene-A3216_04435;Name=A3216_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04435 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 37180 38028 . - 0 ID=cds-OAX71655.1;Parent=gene-A3216_04435;Dbxref=NCBI_GP:OAX71655.1;Name=OAX71655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCR1.1;locus_tag=A3216_04435;product=orotidine 5'-phosphate decarboxylase;protein_id=OAX71655.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 38025 41390 . - . ID=gene-A3216_04440;Name=A3216_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04440 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 38025 41390 . - 0 ID=cds-OAX71656.1;Parent=gene-A3216_04440;Dbxref=NCBI_GP:OAX71656.1;Name=OAX71656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCR2.2;locus_tag=A3216_04440;product=carbamoyl phosphate synthase large subunit;protein_id=OAX71656.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 41473 42600 . - . ID=gene-A3216_04445;Name=A3216_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04445 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 41473 42600 . - 0 ID=cds-OAX71684.1;Parent=gene-A3216_04445;Dbxref=NCBI_GP:OAX71684.1;Name=OAX71684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCR3.1;locus_tag=A3216_04445;product=carbamoyl phosphate synthase small subunit;protein_id=OAX71684.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 42677 43134 . - . ID=gene-A3216_04450;Name=A3216_04450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04450;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 42677 43134 . - 0 ID=cds-A3216_04450;Parent=gene-A3216_04450;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020728547.1;locus_tag=A3216_04450;product=transporter;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 43187 44479 . - . ID=gene-A3216_04455;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=A3216_04455 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 43187 44479 . - 0 ID=cds-OAX71657.1;Parent=gene-A3216_04455;Dbxref=NCBI_GP:OAX71657.1;Name=OAX71657.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCR4.1;locus_tag=A3216_04455;product=dihydroorotase;protein_id=OAX71657.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 44476 45438 . - . ID=gene-A3216_04460;Name=A3216_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04460 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 44476 45438 . - 0 ID=cds-OAX71658.1;Parent=gene-A3216_04460;Dbxref=NCBI_GP:OAX71658.1;Name=OAX71658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009951741.1;locus_tag=A3216_04460;product=aspartate carbamoyltransferase;protein_id=OAX71658.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 45438 45981 . - . ID=gene-A3216_04465;Name=A3216_04465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04465;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 45438 45981 . - 0 ID=cds-A3216_04465;Parent=gene-A3216_04465;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q741H6.1;locus_tag=A3216_04465;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 46189 47419 . + . ID=gene-A3216_04470;Name=A3216_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04470;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 46189 47419 . + 0 ID=cds-A3216_04470;Parent=gene-A3216_04470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015456246.1;locus_tag=A3216_04470;product=HNH endonuclease;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 47821 48063 . - . ID=gene-A3216_04475;Name=A3216_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04475 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 47821 48063 . - 0 ID=cds-OAX71659.1;Parent=gene-A3216_04475;Dbxref=NCBI_GP:OAX71659.1;Name=OAX71659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04475;product=hypothetical protein;protein_id=OAX71659.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 48221 48526 . + . ID=gene-A3216_04480;Name=A3216_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04480 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 48221 48526 . + 0 ID=cds-OAX71660.1;Parent=gene-A3216_04480;Dbxref=NCBI_GP:OAX71660.1;Name=OAX71660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04480;product=hypothetical protein;protein_id=OAX71660.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 49359 49757 . - . ID=gene-A3216_04485;Name=A3216_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04485 GCA_001648835.1|LVXE01000008.1 GeneMarkS+ CDS 49359 49757 . - 0 ID=cds-OAX71661.1;Parent=gene-A3216_04485;Dbxref=NCBI_GP:OAX71661.1;Name=OAX71661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04485;product=hypothetical protein;protein_id=OAX71661.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 51090 51344 . + . ID=gene-A3216_04490;Name=A3216_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04490 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 51090 51344 . + 0 ID=cds-OAX71662.1;Parent=gene-A3216_04490;Dbxref=NCBI_GP:OAX71662.1;Name=OAX71662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907775.1;locus_tag=A3216_04490;product=hypothetical protein;protein_id=OAX71662.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 52015 53209 . + . ID=gene-A3216_04495;Name=A3216_04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04495;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 52015 53209 . + 0 ID=cds-A3216_04495;Parent=gene-A3216_04495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011739868.1;locus_tag=A3216_04495;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 53354 53530 . - . ID=gene-A3216_04500;Name=A3216_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04500 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 53354 53530 . - 0 ID=cds-OAX71663.1;Parent=gene-A3216_04500;Dbxref=NCBI_GP:OAX71663.1;Name=OAX71663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907774.1;locus_tag=A3216_04500;product=hypothetical protein;protein_id=OAX71663.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 53527 56379 . - . ID=gene-A3216_04505;Name=A3216_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04505 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 53527 56379 . - 0 ID=cds-OAX71664.1;Parent=gene-A3216_04505;Dbxref=NCBI_GP:OAX71664.1;Name=OAX71664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907773.1;locus_tag=A3216_04505;product=amino acid decarboxylase;protein_id=OAX71664.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 56917 57489 . - . ID=gene-A3216_04510;Name=A3216_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04510 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 56917 57489 . - 0 ID=cds-OAX71665.1;Parent=gene-A3216_04510;Dbxref=NCBI_GP:OAX71665.1;Name=OAX71665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCR9.1;locus_tag=A3216_04510;product=N utilization substance protein B;protein_id=OAX71665.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 57492 58055 . - . ID=gene-A3216_04515;Name=A3216_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04515 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 57492 58055 . - 0 ID=cds-OAX71666.1;Parent=gene-A3216_04515;Dbxref=NCBI_GP:OAX71666.1;Name=OAX71666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS0.1;locus_tag=A3216_04515;product=elongation factor P;protein_id=OAX71666.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 58071 59201 . - . ID=gene-A3216_04520;Name=A3216_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04520 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 58071 59201 . - 0 ID=cds-OAX71667.1;Parent=gene-A3216_04520;Dbxref=NCBI_GP:OAX71667.1;Name=OAX71667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907770.1;locus_tag=A3216_04520;product=X-Pro dipeptidase;protein_id=OAX71667.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 59235 59843 . + . ID=gene-A3216_04525;Name=A3216_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04525 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 59235 59843 . + 0 ID=cds-OAX71668.1;Parent=gene-A3216_04525;Dbxref=NCBI_GP:OAX71668.1;Name=OAX71668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907769.1;locus_tag=A3216_04525;product=hypothetical protein;protein_id=OAX71668.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 59932 60369 . - . ID=gene-A3216_04530;Name=A3216_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04530 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 59932 60369 . - 0 ID=cds-OAX71669.1;Parent=gene-A3216_04530;Dbxref=NCBI_GP:OAX71669.1;Name=OAX71669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS3.1;locus_tag=A3216_04530;product=type II 3-dehydroquinate dehydratase;protein_id=OAX71669.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 60369 61454 . - . ID=gene-A3216_04535;Name=A3216_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04535 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 60369 61454 . - 0 ID=cds-OAX71670.1;Parent=gene-A3216_04535;Dbxref=NCBI_GP:OAX71670.1;Name=OAX71670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS4.1;locus_tag=A3216_04535;product=3-dehydroquinate synthase;protein_id=OAX71670.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 61451 62050 . - . ID=gene-A3216_04540;Name=A3216_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04540 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 61451 62050 . - 0 ID=cds-OAX71671.1;Parent=gene-A3216_04540;Dbxref=NCBI_GP:OAX71671.1;Name=OAX71671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS5.1;locus_tag=A3216_04540;product=shikimate kinase;protein_id=OAX71671.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 62058 63281 . - . ID=gene-A3216_04545;Name=A3216_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04545 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 62058 63281 . - 0 ID=cds-OAX71672.1;Parent=gene-A3216_04545;Dbxref=NCBI_GP:OAX71672.1;Name=OAX71672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS6.1;locus_tag=A3216_04545;product=chorismate synthase;protein_id=OAX71672.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 63510 64346 . - . ID=gene-A3216_04550;Name=A3216_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04550 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 63510 64346 . - 0 ID=cds-OAX71673.1;Parent=gene-A3216_04550;Dbxref=NCBI_GP:OAX71673.1;Name=OAX71673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907764.1;locus_tag=A3216_04550;product=shikimate dehydrogenase;protein_id=OAX71673.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 64324 65589 . - . ID=gene-A3216_04555;Name=A3216_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04555 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 64324 65589 . - 0 ID=cds-OAX71674.1;Parent=gene-A3216_04555;Dbxref=NCBI_GP:OAX71674.1;Name=OAX71674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907763.1;locus_tag=A3216_04555;product=aminodeoxychorismate lyase;protein_id=OAX71674.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 65582 66136 . - . ID=gene-A3216_04560;Name=A3216_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04560 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 65582 66136 . - 0 ID=cds-OAX71675.1;Parent=gene-A3216_04560;Dbxref=NCBI_GP:OAX71675.1;Name=OAX71675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCS9.1;locus_tag=A3216_04560;product=Holliday junction DNA helicase RuvA;protein_id=OAX71675.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank gene 66137 68863 . - . ID=gene-A3216_04565;Name=A3216_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04565 GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 66137 68863 . - 0 ID=cds-OAX71676.1;Parent=gene-A3216_04565;Dbxref=NCBI_GP:OAX71676.1;Name=OAX71676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCT0.1;locus_tag=A3216_04565;product=alanine--tRNA ligase;protein_id=OAX71676.1;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 69362 69897 . + . ID=gene-A3216_04570;Name=A3216_04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04570;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 69362 69897 . + 0 ID=cds-A3216_04570;Parent=gene-A3216_04570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009955915.1;locus_tag=A3216_04570;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000008.1 Genbank pseudogene 69935 70755 . - . ID=gene-A3216_04575;Name=A3216_04575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04575;pseudo=true GCA_001648835.1|LVXE01000008.1 Protein Homology CDS 69935 70755 . - 2 ID=cds-A3216_04575;Parent=gene-A3216_04575;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019684071.1;locus_tag=A3216_04575;product=AAA family ATPase;pseudo=true;transl_table=11 ##sequence-region LVXE01000080.1 1 10078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000080.1 Genbank region 1 10078 . + . ID=LVXE01000080.1:1..10078;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000080.1 Genbank pseudogene 1 2974 . - . ID=gene-A3216_13565;Name=A3216_13565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13565;pseudo=true GCA_001648835.1|LVXE01000080.1 Protein Homology CDS 1 2974 . - 0 ID=cds-A3216_13565;Parent=gene-A3216_13565;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908856.1;locus_tag=A3216_13565;product=polyketide synthase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 2971 4722 . - . ID=gene-A3216_13570;Name=A3216_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13570 GCA_001648835.1|LVXE01000080.1 Protein Homology CDS 2971 4722 . - 0 ID=cds-OAX70166.1;Parent=gene-A3216_13570;Dbxref=NCBI_GP:OAX70166.1;Name=OAX70166.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908857.1;locus_tag=A3216_13570;product=acyl-CoA synthetase;protein_id=OAX70166.1;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 5368 6153 . - . ID=gene-A3216_13575;Name=A3216_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13575 GCA_001648835.1|LVXE01000080.1 Protein Homology CDS 5368 6153 . - 0 ID=cds-OAX70171.1;Parent=gene-A3216_13575;Dbxref=NCBI_GP:OAX70171.1;Name=OAX70171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9Z5K4.1;locus_tag=A3216_13575;product=thioesterase;protein_id=OAX70171.1;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 6186 6482 . - . ID=gene-A3216_13580;Name=A3216_13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13580 GCA_001648835.1|LVXE01000080.1 GeneMarkS+ CDS 6186 6482 . - 0 ID=cds-OAX70167.1;Parent=gene-A3216_13580;Dbxref=NCBI_GP:OAX70167.1;Name=OAX70167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13580;product=hypothetical protein;protein_id=OAX70167.1;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 6483 6716 . - . ID=gene-A3216_13585;Name=A3216_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13585 GCA_001648835.1|LVXE01000080.1 GeneMarkS+ CDS 6483 6716 . - 0 ID=cds-OAX70168.1;Parent=gene-A3216_13585;Dbxref=NCBI_GP:OAX70168.1;Name=OAX70168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13585;product=hypothetical protein;protein_id=OAX70168.1;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 8834 9181 . + . ID=gene-A3216_13590;Name=A3216_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13590 GCA_001648835.1|LVXE01000080.1 GeneMarkS+ CDS 8834 9181 . + 0 ID=cds-OAX70169.1;Parent=gene-A3216_13590;Dbxref=NCBI_GP:OAX70169.1;Name=OAX70169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13590;product=hypothetical protein;protein_id=OAX70169.1;transl_table=11 GCA_001648835.1|LVXE01000080.1 Genbank gene 9313 9525 . - . ID=gene-A3216_13595;Name=A3216_13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13595 GCA_001648835.1|LVXE01000080.1 GeneMarkS+ CDS 9313 9525 . - 0 ID=cds-OAX70170.1;Parent=gene-A3216_13595;Dbxref=NCBI_GP:OAX70170.1;Name=OAX70170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13595;product=hypothetical protein;protein_id=OAX70170.1;transl_table=11 ##sequence-region LVXE01000081.1 1 9598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000081.1 Genbank region 1 9598 . + . ID=LVXE01000081.1:1..9598;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000081.1 Genbank gene 536 964 . + . ID=gene-A3216_13600;Name=A3216_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13600 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 536 964 . + 0 ID=cds-OAX70155.1;Parent=gene-A3216_13600;Dbxref=NCBI_GP:OAX70155.1;Name=OAX70155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13600;product=hypothetical protein;protein_id=OAX70155.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 1460 1870 . + . ID=gene-A3216_13605;Name=A3216_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13605 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 1460 1870 . + 0 ID=cds-OAX70156.1;Parent=gene-A3216_13605;Dbxref=NCBI_GP:OAX70156.1;Name=OAX70156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13605;product=hypothetical protein;protein_id=OAX70156.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 1873 2097 . + . ID=gene-A3216_13610;Name=A3216_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13610 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 1873 2097 . + 0 ID=cds-OAX70157.1;Parent=gene-A3216_13610;Dbxref=NCBI_GP:OAX70157.1;Name=OAX70157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13610;product=hypothetical protein;protein_id=OAX70157.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 2145 2573 . - . ID=gene-A3216_13615;Name=A3216_13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13615 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 2145 2573 . - 0 ID=cds-OAX70158.1;Parent=gene-A3216_13615;Dbxref=NCBI_GP:OAX70158.1;Name=OAX70158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13615;product=hypothetical protein;protein_id=OAX70158.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank pseudogene 2597 3108 . + . ID=gene-A3216_13620;Name=A3216_13620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13620;pseudo=true GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 2597 3108 . + 0 ID=cds-A3216_13620;Parent=gene-A3216_13620;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014585455.1;locus_tag=A3216_13620;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 3074 4015 . - . ID=gene-A3216_13625;Name=A3216_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13625 GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 3074 4015 . - 0 ID=cds-OAX70164.1;Parent=gene-A3216_13625;Dbxref=NCBI_GP:OAX70164.1;Name=OAX70164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017351229.1;locus_tag=A3216_13625;product=prephenate dehydrogenase;protein_id=OAX70164.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 4147 4668 . + . ID=gene-A3216_13630;Name=A3216_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13630 GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 4147 4668 . + 0 ID=cds-OAX70159.1;Parent=gene-A3216_13630;Dbxref=NCBI_GP:OAX70159.1;Name=OAX70159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003899676.1;locus_tag=A3216_13630;product=tRNA adenosine deaminase;protein_id=OAX70159.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 4683 5198 . + . ID=gene-A3216_13635;Name=A3216_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13635 GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 4683 5198 . + 0 ID=cds-OAX70165.1;Parent=gene-A3216_13635;Dbxref=NCBI_GP:OAX70165.1;Name=OAX70165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908921.1;locus_tag=A3216_13635;product=tRNA-specific adenosine deaminase;protein_id=OAX70165.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 5215 5305 . + . ID=gene-A3216_13640;Name=A3216_13640;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_13640 GCA_001648835.1|LVXE01000081.1 tRNAscan-SE tRNA 5215 5305 . + . ID=rna-A3216_13640;Parent=gene-A3216_13640;anticodon=(pos:5249..5251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_13640;product=tRNA-Ser GCA_001648835.1|LVXE01000081.1 tRNAscan-SE exon 5215 5305 . + . ID=exon-A3216_13640-1;Parent=rna-A3216_13640;anticodon=(pos:5249..5251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_13640;product=tRNA-Ser GCA_001648835.1|LVXE01000081.1 Genbank pseudogene 5360 6296 . - . ID=gene-A3216_13645;Name=A3216_13645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13645;pseudo=true GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 5360 6296 . - 0 ID=cds-A3216_13645;Parent=gene-A3216_13645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003411688.1;locus_tag=A3216_13645;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 6556 6723 . - . ID=gene-A3216_13650;Name=A3216_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13650 GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 6556 6723 . - 0 ID=cds-OAX70160.1;Parent=gene-A3216_13650;Dbxref=NCBI_GP:OAX70160.1;Name=OAX70160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908922.1;locus_tag=A3216_13650;product=hypothetical protein;protein_id=OAX70160.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 6991 7308 . - . ID=gene-A3216_13655;Name=A3216_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13655 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 6991 7308 . - 0 ID=cds-OAX70161.1;Parent=gene-A3216_13655;Dbxref=NCBI_GP:OAX70161.1;Name=OAX70161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13655;product=hypothetical protein;protein_id=OAX70161.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 7852 8097 . + . ID=gene-A3216_13660;Name=A3216_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13660 GCA_001648835.1|LVXE01000081.1 GeneMarkS+ CDS 7852 8097 . + 0 ID=cds-OAX70162.1;Parent=gene-A3216_13660;Dbxref=NCBI_GP:OAX70162.1;Name=OAX70162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13660;product=hypothetical protein;protein_id=OAX70162.1;transl_table=11 GCA_001648835.1|LVXE01000081.1 Genbank gene 8668 9057 . - . ID=gene-A3216_13665;Name=A3216_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13665 GCA_001648835.1|LVXE01000081.1 Protein Homology CDS 8668 9057 . - 0 ID=cds-OAX70163.1;Parent=gene-A3216_13665;Dbxref=NCBI_GP:OAX70163.1;Name=OAX70163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908923.1;locus_tag=A3216_13665;product=hypothetical protein;protein_id=OAX70163.1;transl_table=11 ##sequence-region LVXE01000082.1 1 9449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000082.1 Genbank region 1 9449 . + . ID=LVXE01000082.1:1..9449;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000082.1 Genbank pseudogene 338 1481 . + . ID=gene-A3216_13670;Name=A3216_13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13670;pseudo=true GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 338 1481 . + 0 ID=cds-A3216_13670;Parent=gene-A3216_13670;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020728344.1;locus_tag=A3216_13670;product=lipid-transfer protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank pseudogene 1609 2279 . - . ID=gene-A3216_13675;Name=A3216_13675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13675;pseudo=true GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 1609 2279 . - 0 ID=cds-A3216_13675;Parent=gene-A3216_13675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019738144.1;locus_tag=A3216_13675;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank gene 2439 3434 . + . ID=gene-A3216_13680;Name=A3216_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13680 GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 2439 3434 . + 0 ID=cds-OAX70152.1;Parent=gene-A3216_13680;Dbxref=NCBI_GP:OAX70152.1;Name=OAX70152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907965.1;locus_tag=A3216_13680;product=riboflavin biosynthesis protein RibF;protein_id=OAX70152.1;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank gene 3552 3821 . + . ID=gene-A3216_13685;Name=A3216_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13685 GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 3552 3821 . + 0 ID=cds-OAX70151.1;Parent=gene-A3216_13685;Dbxref=NCBI_GP:OAX70151.1;Name=OAX70151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q1BA77.1;locus_tag=A3216_13685;product=30S ribosomal protein S15;protein_id=OAX70151.1;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank gene 4143 6464 . + . ID=gene-A3216_13690;Name=A3216_13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13690 GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 4143 6464 . + 0 ID=cds-OAX70153.1;Parent=gene-A3216_13690;Dbxref=NCBI_GP:OAX70153.1;Name=OAX70153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CCF8.1;locus_tag=A3216_13690;product=polyribonucleotide nucleotidyltransferase;protein_id=OAX70153.1;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank gene 6553 7827 . + . ID=gene-A3216_13695;Name=A3216_13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13695 GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 6553 7827 . + 0 ID=cds-OAX70154.1;Parent=gene-A3216_13695;Dbxref=NCBI_GP:OAX70154.1;Name=OAX70154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907968.1;locus_tag=A3216_13695;product=zinc protease;protein_id=OAX70154.1;transl_table=11 GCA_001648835.1|LVXE01000082.1 Genbank pseudogene 7832 8856 . + . ID=gene-A3216_13700;Name=A3216_13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13700;pseudo=true GCA_001648835.1|LVXE01000082.1 Protein Homology CDS 7832 8856 . + 0 ID=cds-A3216_13700;Parent=gene-A3216_13700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015628410.1;locus_tag=A3216_13700;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000083.1 1 8754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000083.1 Genbank region 1 8754 . + . ID=LVXE01000083.1:1..8754;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000083.1 Genbank gene 421 705 . + . ID=gene-A3216_13705;Name=A3216_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13705 GCA_001648835.1|LVXE01000083.1 Protein Homology CDS 421 705 . + 0 ID=cds-OAX70149.1;Parent=gene-A3216_13705;Dbxref=NCBI_GP:OAX70149.1;Name=OAX70149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908034.1;locus_tag=A3216_13705;product=hypothetical protein;protein_id=OAX70149.1;transl_table=11 GCA_001648835.1|LVXE01000083.1 Genbank pseudogene 912 1584 . + . ID=gene-A3216_13710;Name=A3216_13710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13710;pseudo=true GCA_001648835.1|LVXE01000083.1 Protein Homology CDS 912 1584 . + 0 ID=cds-A3216_13710;Parent=gene-A3216_13710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003909518.1;locus_tag=A3216_13710;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000083.1 Genbank gene 1778 2239 . - . ID=gene-A3216_13715;Name=A3216_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13715 GCA_001648835.1|LVXE01000083.1 GeneMarkS+ CDS 1778 2239 . - 0 ID=cds-OAX70150.1;Parent=gene-A3216_13715;Dbxref=NCBI_GP:OAX70150.1;Name=OAX70150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13715;product=hypothetical protein;protein_id=OAX70150.1;transl_table=11 GCA_001648835.1|LVXE01000083.1 Genbank pseudogene 2682 3612 . + . ID=gene-A3216_13720;Name=A3216_13720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13720;pseudo=true GCA_001648835.1|LVXE01000083.1 Protein Homology CDS 2682 3612 . + 0 ID=cds-A3216_13720;Parent=gene-A3216_13720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771399.1;locus_tag=A3216_13720;product=C-5 sterol desaturase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000083.1 Genbank pseudogene 4954 5601 . + . ID=gene-A3216_13725;Name=A3216_13725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13725;pseudo=true GCA_001648835.1|LVXE01000083.1 Protein Homology CDS 4954 5601 . + 0 ID=cds-A3216_13725;Parent=gene-A3216_13725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019972841.1;locus_tag=A3216_13725;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000083.1 Genbank pseudogene 6210 7656 . + . ID=gene-A3216_13730;Name=A3216_13730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13730;pseudo=true GCA_001648835.1|LVXE01000083.1 Protein Homology CDS 6210 7656 . + 0 ID=cds-A3216_13730;Parent=gene-A3216_13730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382632.1;locus_tag=A3216_13730;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000084.1 1 8062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000084.1 Genbank region 1 8062 . + . ID=LVXE01000084.1:1..8062;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000084.1 Genbank gene 763 1578 . - . ID=gene-A3216_13735;Name=A3216_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13735 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 763 1578 . - 0 ID=cds-OAX70142.1;Parent=gene-A3216_13735;Dbxref=NCBI_GP:OAX70142.1;Name=OAX70142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003875629.1;locus_tag=A3216_13735;product=hypothetical protein;protein_id=OAX70142.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 1693 2334 . - . ID=gene-A3216_13740;Name=A3216_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13740 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 1693 2334 . - 0 ID=cds-OAX70143.1;Parent=gene-A3216_13740;Dbxref=NCBI_GP:OAX70143.1;Name=OAX70143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908614.1;locus_tag=A3216_13740;product=carbonic anhydrase;protein_id=OAX70143.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 2333 3226 . + . ID=gene-A3216_13745;Name=A3216_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13745 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 2333 3226 . + 0 ID=cds-OAX70144.1;Parent=gene-A3216_13745;Dbxref=NCBI_GP:OAX70144.1;Name=OAX70144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908615.1;locus_tag=A3216_13745;product=adenine glycosylase;protein_id=OAX70144.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 3235 4005 . - . ID=gene-A3216_13750;Name=A3216_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13750 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 3235 4005 . - 0 ID=cds-OAX70145.1;Parent=gene-A3216_13750;Dbxref=NCBI_GP:OAX70145.1;Name=OAX70145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908616.1;locus_tag=A3216_13750;product=alpha/beta hydrolase;protein_id=OAX70145.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 4131 4448 . + . ID=gene-A3216_13755;Name=A3216_13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13755 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 4131 4448 . + 0 ID=cds-OAX70146.1;Parent=gene-A3216_13755;Dbxref=NCBI_GP:OAX70146.1;Name=OAX70146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908617.1;locus_tag=A3216_13755;product=monooxygenase;protein_id=OAX70146.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 4423 5787 . + . ID=gene-A3216_13760;Name=A3216_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13760 GCA_001648835.1|LVXE01000084.1 Protein Homology CDS 4423 5787 . + 0 ID=cds-OAX70147.1;Parent=gene-A3216_13760;Dbxref=NCBI_GP:OAX70147.1;Name=OAX70147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908618.1;locus_tag=A3216_13760;product=serine hydrolase;protein_id=OAX70147.1;transl_table=11 GCA_001648835.1|LVXE01000084.1 Genbank gene 6094 6435 . - . ID=gene-A3216_13765;Name=A3216_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13765 GCA_001648835.1|LVXE01000084.1 GeneMarkS+ CDS 6094 6435 . - 0 ID=cds-OAX70148.1;Parent=gene-A3216_13765;Dbxref=NCBI_GP:OAX70148.1;Name=OAX70148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13765;product=hypothetical protein;protein_id=OAX70148.1;transl_table=11 ##sequence-region LVXE01000085.1 1 7551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000085.1 Genbank region 1 7551 . + . ID=LVXE01000085.1:1..7551;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000085.1 Genbank pseudogene 1 280 . + . ID=gene-A3216_13770;Name=A3216_13770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13770;pseudo=true GCA_001648835.1|LVXE01000085.1 GeneMarkS+ CDS 1 280 . + 1 ID=cds-A3216_13770;Parent=gene-A3216_13770;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13770;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank gene 1052 1273 . + . ID=gene-A3216_13775;Name=A3216_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13775 GCA_001648835.1|LVXE01000085.1 GeneMarkS+ CDS 1052 1273 . + 0 ID=cds-OAX70137.1;Parent=gene-A3216_13775;Dbxref=NCBI_GP:OAX70137.1;Name=OAX70137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13775;product=hypothetical protein;protein_id=OAX70137.1;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank gene 1323 1703 . - . ID=gene-A3216_13780;Name=A3216_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13780 GCA_001648835.1|LVXE01000085.1 GeneMarkS+ CDS 1323 1703 . - 0 ID=cds-OAX70138.1;Parent=gene-A3216_13780;Dbxref=NCBI_GP:OAX70138.1;Name=OAX70138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13780;product=hypothetical protein;protein_id=OAX70138.1;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank pseudogene 2565 3306 . + . ID=gene-A3216_13785;Name=A3216_13785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13785;pseudo=true GCA_001648835.1|LVXE01000085.1 Protein Homology CDS 2565 3306 . + 0 ID=cds-A3216_13785;Parent=gene-A3216_13785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014000656.1;locus_tag=A3216_13785;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank gene 3364 4794 . + . ID=gene-A3216_13790;Name=A3216_13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13790 GCA_001648835.1|LVXE01000085.1 Protein Homology CDS 3364 4794 . + 0 ID=cds-OAX70139.1;Parent=gene-A3216_13790;Dbxref=NCBI_GP:OAX70139.1;Name=OAX70139.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908096.1;locus_tag=A3216_13790;product=acyl-CoA synthetase;protein_id=OAX70139.1;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank gene 4817 6082 . - . ID=gene-A3216_13795;Name=A3216_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13795 GCA_001648835.1|LVXE01000085.1 Protein Homology CDS 4817 6082 . - 0 ID=cds-OAX70140.1;Parent=gene-A3216_13795;Dbxref=NCBI_GP:OAX70140.1;Name=OAX70140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908097.1;locus_tag=A3216_13795;product=transcriptional regulator;protein_id=OAX70140.1;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank gene 6629 6928 . + . ID=gene-A3216_13800;Name=A3216_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13800 GCA_001648835.1|LVXE01000085.1 Protein Homology CDS 6629 6928 . + 0 ID=cds-OAX70141.1;Parent=gene-A3216_13800;Dbxref=NCBI_GP:OAX70141.1;Name=OAX70141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908098.1;locus_tag=A3216_13800;product=hypothetical protein;protein_id=OAX70141.1;transl_table=11 GCA_001648835.1|LVXE01000085.1 Genbank pseudogene 6985 7485 . + . ID=gene-A3216_13805;Name=A3216_13805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13805;pseudo=true GCA_001648835.1|LVXE01000085.1 Protein Homology CDS 6985 7485 . + 0 ID=cds-A3216_13805;Parent=gene-A3216_13805;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908184.1;locus_tag=A3216_13805;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000086.1 1 7429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000086.1 Genbank region 1 7429 . + . ID=LVXE01000086.1:1..7429;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000086.1 Genbank pseudogene 1 1134 . + . ID=gene-A3216_13810;Name=A3216_13810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13810;pseudo=true GCA_001648835.1|LVXE01000086.1 Protein Homology CDS 1 1134 . + 0 ID=cds-A3216_13810;Parent=gene-A3216_13810;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54881.1;locus_tag=A3216_13810;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 1131 1328 . - . ID=gene-A3216_13815;Name=A3216_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13815 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 1131 1328 . - 0 ID=cds-OAX70129.1;Parent=gene-A3216_13815;Dbxref=NCBI_GP:OAX70129.1;Name=OAX70129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13815;product=hypothetical protein;protein_id=OAX70129.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 1445 1627 . + . ID=gene-A3216_13820;Name=A3216_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13820 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 1445 1627 . + 0 ID=cds-OAX70130.1;Parent=gene-A3216_13820;Dbxref=NCBI_GP:OAX70130.1;Name=OAX70130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13820;product=hypothetical protein;protein_id=OAX70130.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 2035 2283 . + . ID=gene-A3216_13825;Name=A3216_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13825 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 2035 2283 . + 0 ID=cds-OAX70131.1;Parent=gene-A3216_13825;Dbxref=NCBI_GP:OAX70131.1;Name=OAX70131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13825;product=hypothetical protein;protein_id=OAX70131.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 3060 3413 . + . ID=gene-A3216_13830;Name=A3216_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13830 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 3060 3413 . + 0 ID=cds-OAX70132.1;Parent=gene-A3216_13830;Dbxref=NCBI_GP:OAX70132.1;Name=OAX70132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13830;product=hypothetical protein;protein_id=OAX70132.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 4058 4366 . - . ID=gene-A3216_13835;Name=A3216_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13835 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 4058 4366 . - 0 ID=cds-OAX70133.1;Parent=gene-A3216_13835;Dbxref=NCBI_GP:OAX70133.1;Name=OAX70133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13835;product=hypothetical protein;protein_id=OAX70133.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 5235 5438 . + . ID=gene-A3216_13840;Name=A3216_13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13840 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 5235 5438 . + 0 ID=cds-OAX70134.1;Parent=gene-A3216_13840;Dbxref=NCBI_GP:OAX70134.1;Name=OAX70134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13840;product=hypothetical protein;protein_id=OAX70134.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 6090 6350 . + . ID=gene-A3216_13845;Name=A3216_13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13845 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 6090 6350 . + 0 ID=cds-OAX70135.1;Parent=gene-A3216_13845;Dbxref=NCBI_GP:OAX70135.1;Name=OAX70135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13845;product=hypothetical protein;protein_id=OAX70135.1;transl_table=11 GCA_001648835.1|LVXE01000086.1 Genbank gene 6638 6895 . - . ID=gene-A3216_13850;Name=A3216_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13850 GCA_001648835.1|LVXE01000086.1 GeneMarkS+ CDS 6638 6895 . - 0 ID=cds-OAX70136.1;Parent=gene-A3216_13850;Dbxref=NCBI_GP:OAX70136.1;Name=OAX70136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13850;product=hypothetical protein;protein_id=OAX70136.1;transl_table=11 ##sequence-region LVXE01000087.1 1 7422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000087.1 Genbank region 1 7422 . + . ID=LVXE01000087.1:1..7422;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000087.1 Genbank gene 141 398 . + . ID=gene-A3216_13855;Name=A3216_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13855 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 141 398 . + 0 ID=cds-OAX70122.1;Parent=gene-A3216_13855;Dbxref=NCBI_GP:OAX70122.1;Name=OAX70122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13855;product=hypothetical protein;protein_id=OAX70122.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank pseudogene 906 2670 . + . ID=gene-A3216_13860;Name=A3216_13860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13860;pseudo=true GCA_001648835.1|LVXE01000087.1 Protein Homology CDS 906 2670 . + 0 ID=cds-A3216_13860;Parent=gene-A3216_13860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009974516.1;locus_tag=A3216_13860;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 2888 3085 . - . ID=gene-A3216_13865;Name=A3216_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13865 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 2888 3085 . - 0 ID=cds-OAX70123.1;Parent=gene-A3216_13865;Dbxref=NCBI_GP:OAX70123.1;Name=OAX70123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13865;product=hypothetical protein;protein_id=OAX70123.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 3087 3506 . - . ID=gene-A3216_13870;Name=A3216_13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13870 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 3087 3506 . - 0 ID=cds-OAX70124.1;Parent=gene-A3216_13870;Dbxref=NCBI_GP:OAX70124.1;Name=OAX70124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13870;product=hypothetical protein;protein_id=OAX70124.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank pseudogene 4351 4957 . + . ID=gene-A3216_13875;Name=A3216_13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13875;pseudo=true GCA_001648835.1|LVXE01000087.1 Protein Homology CDS 4351 4957 . + 0 ID=cds-A3216_13875;Parent=gene-A3216_13875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003876985.1;locus_tag=A3216_13875;product=phosphoglycerate kinase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 5083 5328 . + . ID=gene-A3216_13880;Name=A3216_13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13880 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 5083 5328 . + 0 ID=cds-OAX70125.1;Parent=gene-A3216_13880;Dbxref=NCBI_GP:OAX70125.1;Name=OAX70125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13880;product=hypothetical protein;protein_id=OAX70125.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 5738 6100 . + . ID=gene-A3216_13885;Name=A3216_13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13885 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 5738 6100 . + 0 ID=cds-OAX70126.1;Parent=gene-A3216_13885;Dbxref=NCBI_GP:OAX70126.1;Name=OAX70126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13885;product=hypothetical protein;protein_id=OAX70126.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 6069 6410 . - . ID=gene-A3216_13890;Name=A3216_13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13890 GCA_001648835.1|LVXE01000087.1 Protein Homology CDS 6069 6410 . - 0 ID=cds-OAX70127.1;Parent=gene-A3216_13890;Dbxref=NCBI_GP:OAX70127.1;Name=OAX70127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908859.1;locus_tag=A3216_13890;product=hypothetical protein;protein_id=OAX70127.1;transl_table=11 GCA_001648835.1|LVXE01000087.1 Genbank gene 7102 7419 . + . ID=gene-A3216_13895;Name=A3216_13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13895 GCA_001648835.1|LVXE01000087.1 GeneMarkS+ CDS 7102 7419 . + 0 ID=cds-OAX70128.1;Parent=gene-A3216_13895;Dbxref=NCBI_GP:OAX70128.1;Name=OAX70128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13895;product=hypothetical protein;protein_id=OAX70128.1;transl_table=11 ##sequence-region LVXE01000088.1 1 7265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000088.1 Genbank region 1 7265 . + . ID=LVXE01000088.1:1..7265;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000088.1 Genbank gene 60 2939 . - . ID=gene-A3216_13900;Name=A3216_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13900 GCA_001648835.1|LVXE01000088.1 Protein Homology CDS 60 2939 . - 0 ID=cds-OAX70118.1;Parent=gene-A3216_13900;Dbxref=NCBI_GP:OAX70118.1;Name=OAX70118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54881.1;locus_tag=A3216_13900;product=hypothetical protein;protein_id=OAX70118.1;transl_table=11 GCA_001648835.1|LVXE01000088.1 Genbank gene 2936 3400 . - . ID=gene-A3216_13905;Name=A3216_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13905 GCA_001648835.1|LVXE01000088.1 Protein Homology CDS 2936 3400 . - 0 ID=cds-OAX70119.1;Parent=gene-A3216_13905;Dbxref=NCBI_GP:OAX70119.1;Name=OAX70119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P54880.1;locus_tag=A3216_13905;product=hypothetical protein;protein_id=OAX70119.1;transl_table=11 GCA_001648835.1|LVXE01000088.1 Genbank pseudogene 3687 4361 . + . ID=gene-A3216_13910;Name=A3216_13910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13910;pseudo=true GCA_001648835.1|LVXE01000088.1 Protein Homology CDS 3687 4361 . + 0 ID=cds-A3216_13910;Parent=gene-A3216_13910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020731734.1;locus_tag=A3216_13910;product=transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000088.1 Genbank gene 4560 4742 . + . ID=gene-A3216_13915;Name=A3216_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13915 GCA_001648835.1|LVXE01000088.1 GeneMarkS+ CDS 4560 4742 . + 0 ID=cds-OAX70120.1;Parent=gene-A3216_13915;Dbxref=NCBI_GP:OAX70120.1;Name=OAX70120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13915;product=hypothetical protein;protein_id=OAX70120.1;transl_table=11 GCA_001648835.1|LVXE01000088.1 Genbank gene 5130 5534 . + . ID=gene-A3216_13920;Name=A3216_13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13920 GCA_001648835.1|LVXE01000088.1 GeneMarkS+ CDS 5130 5534 . + 0 ID=cds-OAX70121.1;Parent=gene-A3216_13920;Dbxref=NCBI_GP:OAX70121.1;Name=OAX70121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13920;product=hypothetical protein;protein_id=OAX70121.1;transl_table=11 GCA_001648835.1|LVXE01000088.1 Genbank pseudogene 6073 7206 . + . ID=gene-A3216_13925;Name=A3216_13925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13925;pseudo=true GCA_001648835.1|LVXE01000088.1 Protein Homology CDS 6073 7206 . + 0 ID=cds-A3216_13925;Parent=gene-A3216_13925;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003920040.1;locus_tag=A3216_13925;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region LVXE01000089.1 1 6767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000089.1 Genbank region 1 6767 . + . ID=LVXE01000089.1:1..6767;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000089.1 Genbank gene 1 4073 . + . ID=gene-A3216_13930;Name=A3216_13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13930;partial=true;start_range=.,1 GCA_001648835.1|LVXE01000089.1 Protein Homology CDS 1 4073 . + 2 ID=cds-OAX70117.1;Parent=gene-A3216_13930;Dbxref=NCBI_GP:OAX70117.1;Name=OAX70117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908856.1;locus_tag=A3216_13930;partial=true;product=polyketide synthase;protein_id=OAX70117.1;start_range=.,1;transl_table=11 GCA_001648835.1|LVXE01000089.1 Genbank pseudogene 4074 6767 . + . ID=gene-A3216_13935;Name=A3216_13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13935;pseudo=true GCA_001648835.1|LVXE01000089.1 Protein Homology CDS 4074 6767 . + 0 ID=cds-A3216_13935;Parent=gene-A3216_13935;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908855.1;locus_tag=A3216_13935;product=polyketide synthase;pseudo=true;transl_table=11 ##sequence-region LVXE01000009.1 1 67860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000009.1 Genbank region 1 67860 . + . ID=LVXE01000009.1:1..67860;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000009.1 Genbank gene 122 562 . + . ID=gene-A3216_04580;Name=A3216_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04580 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 122 562 . + 0 ID=cds-OAX71578.1;Parent=gene-A3216_04580;Dbxref=NCBI_GP:OAX71578.1;Name=OAX71578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04580;product=hypothetical protein;protein_id=OAX71578.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 1094 1866 . - . ID=gene-A3216_04585;Name=A3216_04585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04585;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 1094 1866 . - 0 ID=cds-A3216_04585;Parent=gene-A3216_04585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012395971.1;locus_tag=A3216_04585;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 2616 2828 . - . ID=gene-A3216_04590;Name=A3216_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04590 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 2616 2828 . - 0 ID=cds-OAX71579.1;Parent=gene-A3216_04590;Dbxref=NCBI_GP:OAX71579.1;Name=OAX71579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907638.1;locus_tag=A3216_04590;product=hypothetical protein;protein_id=OAX71579.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 4123 4196 . - . ID=gene-A3216_04595;Name=A3216_04595;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_04595 GCA_001648835.1|LVXE01000009.1 tRNAscan-SE tRNA 4123 4196 . - . ID=rna-A3216_04595;Parent=gene-A3216_04595;anticodon=(pos:complement(4160..4162));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_04595;product=tRNA-Leu GCA_001648835.1|LVXE01000009.1 tRNAscan-SE exon 4123 4196 . - . ID=exon-A3216_04595-1;Parent=rna-A3216_04595;anticodon=(pos:complement(4160..4162));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_04595;product=tRNA-Leu GCA_001648835.1|LVXE01000009.1 Genbank gene 4892 5194 . + . ID=gene-A3216_04600;Name=A3216_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04600 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 4892 5194 . + 0 ID=cds-OAX71580.1;Parent=gene-A3216_04600;Dbxref=NCBI_GP:OAX71580.1;Name=OAX71580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04600;product=hypothetical protein;protein_id=OAX71580.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 5748 5981 . + . ID=gene-A3216_04605;Name=A3216_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04605 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 5748 5981 . + 0 ID=cds-OAX71581.1;Parent=gene-A3216_04605;Dbxref=NCBI_GP:OAX71581.1;Name=OAX71581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04605;product=hypothetical protein;protein_id=OAX71581.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 6286 6583 . + . ID=gene-A3216_04610;Name=A3216_04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04610;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 6286 6583 . + 0 ID=cds-A3216_04610;Parent=gene-A3216_04610;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011742160.1;locus_tag=A3216_04610;product=peptidase M22;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 6748 6999 . + . ID=gene-A3216_04615;Name=A3216_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04615 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 6748 6999 . + 0 ID=cds-OAX71582.1;Parent=gene-A3216_04615;Dbxref=NCBI_GP:OAX71582.1;Name=OAX71582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04615;product=hypothetical protein;protein_id=OAX71582.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 8231 8533 . - . ID=gene-A3216_04620;Name=A3216_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04620 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 8231 8533 . - 0 ID=cds-OAX71583.1;Parent=gene-A3216_04620;Dbxref=NCBI_GP:OAX71583.1;Name=OAX71583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04620;product=hypothetical protein;protein_id=OAX71583.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 8979 9161 . + . ID=gene-A3216_04625;Name=A3216_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04625 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 8979 9161 . + 0 ID=cds-OAX71584.1;Parent=gene-A3216_04625;Dbxref=NCBI_GP:OAX71584.1;Name=OAX71584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04625;product=hypothetical protein;protein_id=OAX71584.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 10790 11005 . - . ID=gene-A3216_04630;Name=A3216_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04630 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 10790 11005 . - 0 ID=cds-OAX71585.1;Parent=gene-A3216_04630;Dbxref=NCBI_GP:OAX71585.1;Name=OAX71585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04630;product=hypothetical protein;protein_id=OAX71585.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 11278 12231 . - . ID=gene-A3216_04635;Name=A3216_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04635 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 11278 12231 . - 0 ID=cds-OAX71586.1;Parent=gene-A3216_04635;Dbxref=NCBI_GP:OAX71586.1;Name=OAX71586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907637.1;locus_tag=A3216_04635;product=exopolyphosphatase;protein_id=OAX71586.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 12228 12731 . - . ID=gene-A3216_04640;Name=A3216_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04640 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 12228 12731 . - 0 ID=cds-OAX71587.1;Parent=gene-A3216_04640;Dbxref=NCBI_GP:OAX71587.1;Name=OAX71587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907636.1;locus_tag=A3216_04640;product=hypothetical protein;protein_id=OAX71587.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 12724 13407 . - . ID=gene-A3216_04645;Name=A3216_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04645 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 12724 13407 . - 0 ID=cds-OAX71588.1;Parent=gene-A3216_04645;Dbxref=NCBI_GP:OAX71588.1;Name=OAX71588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907635.1;locus_tag=A3216_04645;product=septation inhibitor protein;protein_id=OAX71588.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 13442 14731 . - . ID=gene-A3216_04650;Name=A3216_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04650 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 13442 14731 . - 0 ID=cds-OAX71589.1;Parent=gene-A3216_04650;Dbxref=NCBI_GP:OAX71589.1;Name=OAX71589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007776761.1;locus_tag=A3216_04650;product=phosphopyruvate hydratase;protein_id=OAX71589.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 14869 15658 . - . ID=gene-A3216_04655;Name=A3216_04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04655;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 14869 15658 . - 0 ID=cds-A3216_04655;Parent=gene-A3216_04655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003900256.1;locus_tag=A3216_04655;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 16271 16498 . + . ID=gene-A3216_04660;Name=A3216_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04660 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 16271 16498 . + 0 ID=cds-OAX71590.1;Parent=gene-A3216_04660;Dbxref=NCBI_GP:OAX71590.1;Name=OAX71590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04660;product=hypothetical protein;protein_id=OAX71590.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 16795 20469 . - . ID=gene-A3216_04665;Name=A3216_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04665 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 16795 20469 . - 0 ID=cds-OAX71591.1;Parent=gene-A3216_04665;Dbxref=NCBI_GP:OAX71591.1;Name=OAX71591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907633.1;locus_tag=A3216_04665;product=transcription-repair coupling factor;protein_id=OAX71591.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 20842 21255 . + . ID=gene-A3216_04670;Name=A3216_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04670 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 20842 21255 . + 0 ID=cds-OAX71592.1;Parent=gene-A3216_04670;Dbxref=NCBI_GP:OAX71592.1;Name=OAX71592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04670;product=hypothetical protein;protein_id=OAX71592.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 21538 22149 . - . ID=gene-A3216_04675;Name=A3216_04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04675;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 21538 22149 . - 0 ID=cds-A3216_04675;Parent=gene-A3216_04675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003405271.1;locus_tag=A3216_04675;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 22333 22404 . + . ID=gene-A3216_04680;Name=A3216_04680;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_04680 GCA_001648835.1|LVXE01000009.1 tRNAscan-SE tRNA 22333 22404 . + . ID=rna-A3216_04680;Parent=gene-A3216_04680;anticodon=(pos:22366..22368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_04680;product=tRNA-Gln GCA_001648835.1|LVXE01000009.1 tRNAscan-SE exon 22333 22404 . + . ID=exon-A3216_04680-1;Parent=rna-A3216_04680;anticodon=(pos:22366..22368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_04680;product=tRNA-Gln GCA_001648835.1|LVXE01000009.1 Genbank gene 22502 23980 . + . ID=gene-A3216_04685;Name=A3216_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04685 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 22502 23980 . + 0 ID=cds-OAX71593.1;Parent=gene-A3216_04685;Dbxref=NCBI_GP:OAX71593.1;Name=OAX71593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD44.1;locus_tag=A3216_04685;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=OAX71593.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 24094 25074 . + . ID=gene-A3216_04690;Name=A3216_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04690 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 24094 25074 . + 0 ID=cds-OAX71627.1;Parent=gene-A3216_04690;Dbxref=NCBI_GP:OAX71627.1;Name=OAX71627.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012396022.1;locus_tag=A3216_04690;product=ribose-phosphate pyrophosphokinase;protein_id=OAX71627.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 25130 25444 . + . ID=gene-A3216_04695;Name=A3216_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04695 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 25130 25444 . + 0 ID=cds-OAX71594.1;Parent=gene-A3216_04695;Dbxref=NCBI_GP:OAX71594.1;Name=OAX71594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907630.1;locus_tag=A3216_04695;product=ArsC family transcriptional regulator;protein_id=OAX71594.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 25481 26137 . + . ID=gene-A3216_04700;Name=A3216_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04700 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 25481 26137 . + 0 ID=cds-OAX71628.1;Parent=gene-A3216_04700;Dbxref=NCBI_GP:OAX71628.1;Name=OAX71628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD47.1;locus_tag=A3216_04700;product=hypothetical protein;protein_id=OAX71628.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 27312 27959 . + . ID=gene-A3216_04705;Name=A3216_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04705 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 27312 27959 . + 0 ID=cds-OAX71595.1;Parent=gene-A3216_04705;Dbxref=NCBI_GP:OAX71595.1;Name=OAX71595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD48.1;locus_tag=A3216_04705;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=OAX71595.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 27972 28571 . + . ID=gene-A3216_04710;Name=A3216_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04710 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 27972 28571 . + 0 ID=cds-OAX71596.1;Parent=gene-A3216_04710;Dbxref=NCBI_GP:OAX71596.1;Name=OAX71596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD49.1;locus_tag=A3216_04710;product=aminoacyl-tRNA hydrolase;protein_id=OAX71596.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 28682 30316 . - . ID=gene-A3216_04715;Name=A3216_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04715 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 28682 30316 . - 0 ID=cds-OAX71597.1;Parent=gene-A3216_04715;Dbxref=NCBI_GP:OAX71597.1;Name=OAX71597.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005139918.1;locus_tag=A3216_04715;product=long-chain fatty acid--CoA ligase;protein_id=OAX71597.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 30559 31494 . - . ID=gene-A3216_04720;Name=A3216_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04720 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 30559 31494 . - 0 ID=cds-OAX71629.1;Parent=gene-A3216_04720;Dbxref=NCBI_GP:OAX71629.1;Name=OAX71629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD51.1;locus_tag=A3216_04720;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=OAX71629.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 31568 32506 . - . ID=gene-A3216_04725;Name=A3216_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04725 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 31568 32506 . - 0 ID=cds-OAX71598.1;Parent=gene-A3216_04725;Dbxref=NCBI_GP:OAX71598.1;Name=OAX71598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003918171.1;locus_tag=A3216_04725;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=OAX71598.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 32461 33588 . - . ID=gene-A3216_04730;Name=A3216_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04730 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 32461 33588 . - 0 ID=cds-OAX71599.1;Parent=gene-A3216_04730;Dbxref=NCBI_GP:OAX71599.1;Name=OAX71599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907623.1;locus_tag=A3216_04730;product=Resuscitation-promoting factor RpfB;protein_id=OAX71599.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 33838 34695 . - . ID=gene-A3216_04735;Name=A3216_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04735 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 33838 34695 . - 0 ID=cds-OAX71600.1;Parent=gene-A3216_04735;Dbxref=NCBI_GP:OAX71600.1;Name=OAX71600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015356979.1;locus_tag=A3216_04735;product=DNAase;protein_id=OAX71600.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 34715 36328 . + . ID=gene-A3216_04740;Name=A3216_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04740 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 34715 36328 . + 0 ID=cds-OAX71601.1;Parent=gene-A3216_04740;Dbxref=NCBI_GP:OAX71601.1;Name=OAX71601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD55.1;locus_tag=A3216_04740;product=methionine--tRNA ligase;protein_id=OAX71601.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 37355 37573 . - . ID=gene-A3216_04745;Name=A3216_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04745 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 37355 37573 . - 0 ID=cds-OAX71602.1;Parent=gene-A3216_04745;Dbxref=NCBI_GP:OAX71602.1;Name=OAX71602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04745;product=hypothetical protein;protein_id=OAX71602.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 37625 38881 . + . ID=gene-A3216_04750;Name=A3216_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04750 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 37625 38881 . + 0 ID=cds-OAX71603.1;Parent=gene-A3216_04750;Dbxref=NCBI_GP:OAX71603.1;Name=OAX71603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907620.1;locus_tag=A3216_04750;product=aminodeoxychorismate synthase%2C component I;protein_id=OAX71603.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 39971 42517 . - . ID=gene-A3216_04755;Name=A3216_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04755 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 39971 42517 . - 0 ID=cds-OAX71604.1;Parent=gene-A3216_04755;Dbxref=NCBI_GP:OAX71604.1;Name=OAX71604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P24428.2;locus_tag=A3216_04755;product=NDP-hexose 4-ketoreductase;protein_id=OAX71604.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 42814 43152 . - . ID=gene-A3216_04760;Name=A3216_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04760 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 42814 43152 . - 0 ID=cds-OAX71605.1;Parent=gene-A3216_04760;Dbxref=NCBI_GP:OAX71605.1;Name=OAX71605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014210608.1;locus_tag=A3216_04760;product=nucleoid-associated protein Lsr2;protein_id=OAX71605.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 43257 44780 . - . ID=gene-A3216_04765;Name=A3216_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04765 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 43257 44780 . - 0 ID=cds-OAX71606.1;Parent=gene-A3216_04765;Dbxref=NCBI_GP:OAX71606.1;Name=OAX71606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46861.2;locus_tag=A3216_04765;product=lysine--tRNA ligase;protein_id=OAX71606.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 44861 45685 . - . ID=gene-A3216_04770;Name=A3216_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04770 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 44861 45685 . - 0 ID=cds-OAX71607.1;Parent=gene-A3216_04770;Dbxref=NCBI_GP:OAX71607.1;Name=OAX71607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014210605.1;locus_tag=A3216_04770;product=pantothenate kinase;protein_id=OAX71607.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 45688 46116 . - . ID=gene-A3216_04775;Name=A3216_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04775 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 45688 46116 . - 0 ID=cds-OAX71608.1;Parent=gene-A3216_04775;Dbxref=NCBI_GP:OAX71608.1;Name=OAX71608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008263496.1;locus_tag=A3216_04775;product=aspartate 1-decarboxylase;protein_id=OAX71608.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 46116 47057 . - . ID=gene-A3216_04780;Name=A3216_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04780 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 46116 47057 . - 0 ID=cds-OAX71609.1;Parent=gene-A3216_04780;Dbxref=NCBI_GP:OAX71609.1;Name=OAX71609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69524.2;locus_tag=A3216_04780;product=pantoate--beta-alanine ligase;protein_id=OAX71609.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 47054 47983 . - . ID=gene-A3216_04785;Name=A3216_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04785 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 47054 47983 . - 0 ID=cds-OAX71630.1;Parent=gene-A3216_04785;Dbxref=NCBI_GP:OAX71630.1;Name=OAX71630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014383745.1;locus_tag=A3216_04785;product=oxidoreductase;protein_id=OAX71630.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 48084 49382 . - . ID=gene-A3216_04790;Name=A3216_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04790 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 48084 49382 . - 0 ID=cds-OAX71610.1;Parent=gene-A3216_04790;Dbxref=NCBI_GP:OAX71610.1;Name=OAX71610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907612.1;locus_tag=A3216_04790;product=hypothetical protein;protein_id=OAX71610.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 49528 50004 . - . ID=gene-A3216_04795;Name=A3216_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04795 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 49528 50004 . - 0 ID=cds-OAX71611.1;Parent=gene-A3216_04795;Dbxref=NCBI_GP:OAX71611.1;Name=OAX71611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907611.1;locus_tag=A3216_04795;product=hypothetical protein;protein_id=OAX71611.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 50004 50579 . - . ID=gene-A3216_04800;Name=A3216_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04800 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 50004 50579 . - 0 ID=cds-OAX71612.1;Parent=gene-A3216_04800;Dbxref=NCBI_GP:OAX71612.1;Name=OAX71612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69528.1;locus_tag=A3216_04800;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=OAX71612.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 50579 50977 . - . ID=gene-A3216_04805;Name=A3216_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04805 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 50579 50977 . - 0 ID=cds-OAX71613.1;Parent=gene-A3216_04805;Dbxref=NCBI_GP:OAX71613.1;Name=OAX71613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69529.1;locus_tag=A3216_04805;product=dihydroneopterin aldolase;protein_id=OAX71613.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 50970 51824 . - . ID=gene-A3216_04810;Name=A3216_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04810 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 50970 51824 . - 0 ID=cds-OAX71614.1;Parent=gene-A3216_04810;Dbxref=NCBI_GP:OAX71614.1;Name=OAX71614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P0C0X1.1;locus_tag=A3216_04810;product=dihydropteroate synthase;protein_id=OAX71614.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 51821 52438 . - . ID=gene-A3216_04815;Name=A3216_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04815 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 51821 52438 . - 0 ID=cds-OAX71615.1;Parent=gene-A3216_04815;Dbxref=NCBI_GP:OAX71615.1;Name=OAX71615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69531.1;locus_tag=A3216_04815;product=GTP cyclohydrolase I FolE;protein_id=OAX71615.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 52455 54818 . - . ID=gene-A3216_04820;Name=A3216_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04820 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 52455 54818 . - 0 ID=cds-OAX71616.1;Parent=gene-A3216_04820;Dbxref=NCBI_GP:OAX71616.1;Name=OAX71616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381725.1;locus_tag=A3216_04820;product=cell division protein FtsH;protein_id=OAX71616.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 56050 57110 . + . ID=gene-A3216_04825;Name=A3216_04825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04825;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 56050 57110 . + 0 ID=cds-A3216_04825;Parent=gene-A3216_04825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014378976.1;locus_tag=A3216_04825;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 57152 58159 . + . ID=gene-A3216_04830;Name=A3216_04830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04830;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 57152 58159 . + 0 ID=cds-A3216_04830;Parent=gene-A3216_04830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007772304.1;locus_tag=A3216_04830;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 58305 58691 . + . ID=gene-A3216_04835;Name=A3216_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04835 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 58305 58691 . + 0 ID=cds-OAX71617.1;Parent=gene-A3216_04835;Dbxref=NCBI_GP:OAX71617.1;Name=OAX71617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907605.1;locus_tag=A3216_04835;product=hypothetical protein;protein_id=OAX71617.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 58937 59122 . - . ID=gene-A3216_04840;Name=A3216_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04840 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 58937 59122 . - 0 ID=cds-OAX71618.1;Parent=gene-A3216_04840;Dbxref=NCBI_GP:OAX71618.1;Name=OAX71618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04840;product=hypothetical protein;protein_id=OAX71618.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 59148 59465 . - . ID=gene-A3216_04845;Name=A3216_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04845 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 59148 59465 . - 0 ID=cds-OAX71619.1;Parent=gene-A3216_04845;Dbxref=NCBI_GP:OAX71619.1;Name=OAX71619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04845;product=hypothetical protein;protein_id=OAX71619.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 59597 59842 . - . ID=gene-A3216_04850;Name=A3216_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04850 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 59597 59842 . - 0 ID=cds-OAX71620.1;Parent=gene-A3216_04850;Dbxref=NCBI_GP:OAX71620.1;Name=OAX71620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907604.1;locus_tag=A3216_04850;product=hypothetical protein;protein_id=OAX71620.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 61954 62256 . + . ID=gene-A3216_04855;Name=A3216_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04855 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 61954 62256 . + 0 ID=cds-OAX71621.1;Parent=gene-A3216_04855;Dbxref=NCBI_GP:OAX71621.1;Name=OAX71621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04855;product=hypothetical protein;protein_id=OAX71621.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 62295 62906 . - . ID=gene-A3216_04860;Name=A3216_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04860 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 62295 62906 . - 0 ID=cds-OAX71631.1;Parent=gene-A3216_04860;Dbxref=NCBI_GP:OAX71631.1;Name=OAX71631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P96794.1;locus_tag=A3216_04860;product=hypoxanthine phosphoribosyltransferase;protein_id=OAX71631.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 62969 63940 . - . ID=gene-A3216_04865;Name=A3216_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04865 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 62969 63940 . - 0 ID=cds-OAX71622.1;Parent=gene-A3216_04865;Dbxref=NCBI_GP:OAX71622.1;Name=OAX71622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69538.1;locus_tag=A3216_04865;product=tRNA lysidine(34) synthetase TilS;protein_id=OAX71622.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank pseudogene 63919 64981 . - . ID=gene-A3216_04870;Name=A3216_04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_04870;pseudo=true GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 63919 64981 . - 0 ID=cds-A3216_04870;Parent=gene-A3216_04870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003873260.1;locus_tag=A3216_04870;product=hydrolase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 64978 66315 . - . ID=gene-A3216_04875;Name=A3216_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04875 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 64978 66315 . - 0 ID=cds-OAX71623.1;Parent=gene-A3216_04875;Dbxref=NCBI_GP:OAX71623.1;Name=OAX71623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014381716.1;locus_tag=A3216_04875;product=D-alanyl-D-alanine carboxypeptidase;protein_id=OAX71623.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 66489 66977 . + . ID=gene-A3216_04880;Name=A3216_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04880 GCA_001648835.1|LVXE01000009.1 Protein Homology CDS 66489 66977 . + 0 ID=cds-OAX71624.1;Parent=gene-A3216_04880;Dbxref=NCBI_GP:OAX71624.1;Name=OAX71624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013830833.1;locus_tag=A3216_04880;product=inorganic pyrophosphatase;protein_id=OAX71624.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 67169 67495 . - . ID=gene-A3216_04885;Name=A3216_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04885 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 67169 67495 . - 0 ID=cds-OAX71625.1;Parent=gene-A3216_04885;Dbxref=NCBI_GP:OAX71625.1;Name=OAX71625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04885;product=hypothetical protein;protein_id=OAX71625.1;transl_table=11 GCA_001648835.1|LVXE01000009.1 Genbank gene 67543 67743 . + . ID=gene-A3216_04890;Name=A3216_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_04890 GCA_001648835.1|LVXE01000009.1 GeneMarkS+ CDS 67543 67743 . + 0 ID=cds-OAX71626.1;Parent=gene-A3216_04890;Dbxref=NCBI_GP:OAX71626.1;Name=OAX71626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_04890;product=hypothetical protein;protein_id=OAX71626.1;transl_table=11 ##sequence-region LVXE01000090.1 1 6335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000090.1 Genbank region 1 6335 . + . ID=LVXE01000090.1:1..6335;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000090.1 Genbank gene 12 1121 . + . ID=gene-A3216_13940;Name=A3216_13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13940 GCA_001648835.1|LVXE01000090.1 Protein Homology CDS 12 1121 . + 0 ID=cds-OAX70114.1;Parent=gene-A3216_13940;Dbxref=NCBI_GP:OAX70114.1;Name=OAX70114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57240.1;locus_tag=A3216_13940;product=inositol 1-phosphate synthase;protein_id=OAX70114.1;transl_table=11 GCA_001648835.1|LVXE01000090.1 Genbank pseudogene 2104 2976 . + . ID=gene-A3216_13945;Name=A3216_13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_13945;pseudo=true GCA_001648835.1|LVXE01000090.1 Protein Homology CDS 2104 2976 . + 0 ID=cds-A3216_13945;Parent=gene-A3216_13945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011723318.1;locus_tag=A3216_13945;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000090.1 Genbank gene 4114 4434 . + . ID=gene-A3216_13950;Name=A3216_13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13950 GCA_001648835.1|LVXE01000090.1 GeneMarkS+ CDS 4114 4434 . + 0 ID=cds-OAX70115.1;Parent=gene-A3216_13950;Dbxref=NCBI_GP:OAX70115.1;Name=OAX70115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13950;product=hypothetical protein;protein_id=OAX70115.1;transl_table=11 GCA_001648835.1|LVXE01000090.1 Genbank gene 5601 6104 . + . ID=gene-A3216_13955;Name=A3216_13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13955 GCA_001648835.1|LVXE01000090.1 Protein Homology CDS 5601 6104 . + 0 ID=cds-OAX70116.1;Parent=gene-A3216_13955;Dbxref=NCBI_GP:OAX70116.1;Name=OAX70116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007771688.1;locus_tag=A3216_13955;product=MarR family transcriptional regulator;protein_id=OAX70116.1;transl_table=11 ##sequence-region LVXE01000091.1 1 5417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000091.1 Genbank region 1 5417 . + . ID=LVXE01000091.1:1..5417;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000091.1 Genbank gene 375 1223 . - . ID=gene-A3216_13960;Name=A3216_13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13960 GCA_001648835.1|LVXE01000091.1 Protein Homology CDS 375 1223 . - 0 ID=cds-OAX70108.1;Parent=gene-A3216_13960;Dbxref=NCBI_GP:OAX70108.1;Name=OAX70108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69470.3;locus_tag=A3216_13960;product=DNA-formamidopyrimidine glycosylase;protein_id=OAX70108.1;transl_table=11 GCA_001648835.1|LVXE01000091.1 Genbank gene 1278 1994 . - . ID=gene-A3216_13965;Name=A3216_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13965 GCA_001648835.1|LVXE01000091.1 Protein Homology CDS 1278 1994 . - 0 ID=cds-OAX70112.1;Parent=gene-A3216_13965;Dbxref=NCBI_GP:OAX70112.1;Name=OAX70112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69469.1;locus_tag=A3216_13965;product=ribonuclease III;protein_id=OAX70112.1;transl_table=11 GCA_001648835.1|LVXE01000091.1 Genbank gene 1991 2644 . - . ID=gene-A3216_13970;Name=A3216_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13970 GCA_001648835.1|LVXE01000091.1 Protein Homology CDS 1991 2644 . - 0 ID=cds-OAX70109.1;Parent=gene-A3216_13970;Dbxref=NCBI_GP:OAX70109.1;Name=OAX70109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O69468.1;locus_tag=A3216_13970;product=hypothetical protein;protein_id=OAX70109.1;transl_table=11 GCA_001648835.1|LVXE01000091.1 Genbank gene 2678 3415 . - . ID=gene-A3216_13975;Name=A3216_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13975 GCA_001648835.1|LVXE01000091.1 Protein Homology CDS 2678 3415 . - 0 ID=cds-OAX70113.1;Parent=gene-A3216_13975;Dbxref=NCBI_GP:OAX70113.1;Name=OAX70113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003922083.1;locus_tag=A3216_13975;product=hypothetical protein;protein_id=OAX70113.1;transl_table=11 GCA_001648835.1|LVXE01000091.1 Genbank gene 3806 4006 . + . ID=gene-A3216_13980;Name=A3216_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13980 GCA_001648835.1|LVXE01000091.1 GeneMarkS+ CDS 3806 4006 . + 0 ID=cds-OAX70110.1;Parent=gene-A3216_13980;Dbxref=NCBI_GP:OAX70110.1;Name=OAX70110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13980;product=hypothetical protein;protein_id=OAX70110.1;transl_table=11 GCA_001648835.1|LVXE01000091.1 Genbank gene 4724 4972 . + . ID=gene-A3216_13985;Name=A3216_13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13985 GCA_001648835.1|LVXE01000091.1 GeneMarkS+ CDS 4724 4972 . + 0 ID=cds-OAX70111.1;Parent=gene-A3216_13985;Dbxref=NCBI_GP:OAX70111.1;Name=OAX70111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13985;product=hypothetical protein;protein_id=OAX70111.1;transl_table=11 ##sequence-region LVXE01000092.1 1 5364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000092.1 Genbank region 1 5364 . + . ID=LVXE01000092.1:1..5364;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000092.1 Genbank gene 1031 1234 . - . ID=gene-A3216_13990;Name=A3216_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13990 GCA_001648835.1|LVXE01000092.1 GeneMarkS+ CDS 1031 1234 . - 0 ID=cds-OAX70104.1;Parent=gene-A3216_13990;Dbxref=NCBI_GP:OAX70104.1;Name=OAX70104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_13990;product=hypothetical protein;protein_id=OAX70104.1;transl_table=11 GCA_001648835.1|LVXE01000092.1 Genbank gene 1773 2546 . - . ID=gene-A3216_13995;Name=A3216_13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_13995 GCA_001648835.1|LVXE01000092.1 Protein Homology CDS 1773 2546 . - 0 ID=cds-OAX70105.1;Parent=gene-A3216_13995;Dbxref=NCBI_GP:OAX70105.1;Name=OAX70105.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005144107.1;locus_tag=A3216_13995;product=enoyl-CoA hydratase;protein_id=OAX70105.1;transl_table=11 GCA_001648835.1|LVXE01000092.1 Genbank gene 2571 3608 . - . ID=gene-A3216_14000;Name=A3216_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14000 GCA_001648835.1|LVXE01000092.1 Protein Homology CDS 2571 3608 . - 0 ID=cds-OAX70106.1;Parent=gene-A3216_14000;Dbxref=NCBI_GP:OAX70106.1;Name=OAX70106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908874.1;locus_tag=A3216_14000;product=3-hydroxyisobutyryl-CoA hydrolase;protein_id=OAX70106.1;transl_table=11 GCA_001648835.1|LVXE01000092.1 Genbank gene 3868 4725 . + . ID=gene-A3216_14005;Name=A3216_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14005 GCA_001648835.1|LVXE01000092.1 Protein Homology CDS 3868 4725 . + 0 ID=cds-OAX70107.1;Parent=gene-A3216_14005;Dbxref=NCBI_GP:OAX70107.1;Name=OAX70107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908873.1;locus_tag=A3216_14005;product=hypothetical protein;protein_id=OAX70107.1;transl_table=11 ##sequence-region LVXE01000093.1 1 5006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000093.1 Genbank region 1 5006 . + . ID=LVXE01000093.1:1..5006;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000093.1 Genbank gene 443 814 . + . ID=gene-A3216_14010;Name=A3216_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14010 GCA_001648835.1|LVXE01000093.1 GeneMarkS+ CDS 443 814 . + 0 ID=cds-OAX70099.1;Parent=gene-A3216_14010;Dbxref=NCBI_GP:OAX70099.1;Name=OAX70099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14010;product=hypothetical protein;protein_id=OAX70099.1;transl_table=11 GCA_001648835.1|LVXE01000093.1 Genbank gene 930 1109 . - . ID=gene-A3216_14015;Name=A3216_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14015 GCA_001648835.1|LVXE01000093.1 GeneMarkS+ CDS 930 1109 . - 0 ID=cds-OAX70100.1;Parent=gene-A3216_14015;Dbxref=NCBI_GP:OAX70100.1;Name=OAX70100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14015;product=hypothetical protein;protein_id=OAX70100.1;transl_table=11 GCA_001648835.1|LVXE01000093.1 Genbank gene 1252 1470 . - . ID=gene-A3216_14020;Name=A3216_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14020 GCA_001648835.1|LVXE01000093.1 GeneMarkS+ CDS 1252 1470 . - 0 ID=cds-OAX70101.1;Parent=gene-A3216_14020;Dbxref=NCBI_GP:OAX70101.1;Name=OAX70101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14020;product=hypothetical protein;protein_id=OAX70101.1;transl_table=11 GCA_001648835.1|LVXE01000093.1 Genbank gene 1582 2112 . - . ID=gene-A3216_14025;Name=A3216_14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14025 GCA_001648835.1|LVXE01000093.1 Protein Homology CDS 1582 2112 . - 0 ID=cds-OAX70102.1;Parent=gene-A3216_14025;Dbxref=NCBI_GP:OAX70102.1;Name=OAX70102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908247.1;locus_tag=A3216_14025;product=hypothetical protein;protein_id=OAX70102.1;transl_table=11 GCA_001648835.1|LVXE01000093.1 Genbank gene 2144 3490 . - . ID=gene-A3216_14030;Name=A3216_14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14030 GCA_001648835.1|LVXE01000093.1 Protein Homology CDS 2144 3490 . - 0 ID=cds-OAX70103.1;Parent=gene-A3216_14030;Dbxref=NCBI_GP:OAX70103.1;Name=OAX70103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014382428.1;locus_tag=A3216_14030;product=hypothetical protein;protein_id=OAX70103.1;transl_table=11 GCA_001648835.1|LVXE01000093.1 Genbank gene 3660 3745 . + . ID=gene-A3216_14035;Name=A3216_14035;gbkey=Gene;gene_biotype=tRNA;locus_tag=A3216_14035 GCA_001648835.1|LVXE01000093.1 tRNAscan-SE tRNA 3660 3745 . + . ID=rna-A3216_14035;Parent=gene-A3216_14035;anticodon=(pos:3693..3695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_14035;product=tRNA-Leu GCA_001648835.1|LVXE01000093.1 tRNAscan-SE exon 3660 3745 . + . ID=exon-A3216_14035-1;Parent=rna-A3216_14035;anticodon=(pos:3693..3695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=A3216_14035;product=tRNA-Leu ##sequence-region LVXE01000094.1 1 4699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000094.1 Genbank region 1 4699 . + . ID=LVXE01000094.1:1..4699;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000094.1 Genbank pseudogene 173 1605 . + . ID=gene-A3216_14040;Name=A3216_14040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14040;pseudo=true GCA_001648835.1|LVXE01000094.1 Protein Homology CDS 173 1605 . + 0 ID=cds-A3216_14040;Parent=gene-A3216_14040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013472536.1;locus_tag=A3216_14040;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000094.1 Genbank gene 2358 2831 . + . ID=gene-A3216_14045;Name=A3216_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14045 GCA_001648835.1|LVXE01000094.1 GeneMarkS+ CDS 2358 2831 . + 0 ID=cds-OAX70096.1;Parent=gene-A3216_14045;Dbxref=NCBI_GP:OAX70096.1;Name=OAX70096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14045;product=hypothetical protein;protein_id=OAX70096.1;transl_table=11 GCA_001648835.1|LVXE01000094.1 Genbank gene 3626 3979 . + . ID=gene-A3216_14050;Name=A3216_14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14050 GCA_001648835.1|LVXE01000094.1 Protein Homology CDS 3626 3979 . + 0 ID=cds-OAX70097.1;Parent=gene-A3216_14050;Dbxref=NCBI_GP:OAX70097.1;Name=OAX70097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010908559.1;locus_tag=A3216_14050;product=hypothetical protein;protein_id=OAX70097.1;transl_table=11 GCA_001648835.1|LVXE01000094.1 Genbank gene 4188 4400 . + . ID=gene-A3216_14055;Name=A3216_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14055 GCA_001648835.1|LVXE01000094.1 GeneMarkS+ CDS 4188 4400 . + 0 ID=cds-OAX70098.1;Parent=gene-A3216_14055;Dbxref=NCBI_GP:OAX70098.1;Name=OAX70098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14055;product=hypothetical protein;protein_id=OAX70098.1;transl_table=11 ##sequence-region LVXE01000095.1 1 3828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000095.1 Genbank region 1 3828 . + . ID=LVXE01000095.1:1..3828;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000095.1 Genbank pseudogene 1 437 . - . ID=gene-A3216_14060;Name=A3216_14060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14060;pseudo=true GCA_001648835.1|LVXE01000095.1 Protein Homology CDS 1 437 . - 0 ID=cds-A3216_14060;Parent=gene-A3216_14060;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P95134.1;locus_tag=A3216_14060;product=glycosyl transferase family 1;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000095.1 Genbank gene 720 1409 . - . ID=gene-A3216_14065;Name=A3216_14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14065 GCA_001648835.1|LVXE01000095.1 Protein Homology CDS 720 1409 . - 0 ID=cds-OAX70094.1;Parent=gene-A3216_14065;Dbxref=NCBI_GP:OAX70094.1;Name=OAX70094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CD89.1;locus_tag=A3216_14065;product=rhamnosyl O-methyltransferase;protein_id=OAX70094.1;transl_table=11 GCA_001648835.1|LVXE01000095.1 Genbank gene 1665 2486 . - . ID=gene-A3216_14070;Name=A3216_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14070 GCA_001648835.1|LVXE01000095.1 Protein Homology CDS 1665 2486 . - 0 ID=cds-OAX70095.1;Parent=gene-A3216_14070;Dbxref=NCBI_GP:OAX70095.1;Name=OAX70095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907545.1;locus_tag=A3216_14070;product=biotin carboxyl carrier protein;protein_id=OAX70095.1;transl_table=11 GCA_001648835.1|LVXE01000095.1 Genbank pseudogene 3157 3828 . - . ID=gene-A3216_14075;Name=A3216_14075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14075;pseudo=true GCA_001648835.1|LVXE01000095.1 Protein Homology CDS 3157 3828 . - 0 ID=cds-A3216_14075;Parent=gene-A3216_14075;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907544.1;locus_tag=A3216_14075;product=glycosyl transferase family 1;pseudo=true;transl_table=11 ##sequence-region LVXE01000096.1 1 3564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000096.1 Genbank region 1 3564 . + . ID=LVXE01000096.1:1..3564;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000096.1 Genbank gene 180 656 . - . ID=gene-A3216_14080;Name=A3216_14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14080 GCA_001648835.1|LVXE01000096.1 Protein Homology CDS 180 656 . - 0 ID=cds-OAX70091.1;Parent=gene-A3216_14080;Dbxref=NCBI_GP:OAX70091.1;Name=OAX70091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907726.1;locus_tag=A3216_14080;product=hypothetical protein;protein_id=OAX70091.1;transl_table=11 GCA_001648835.1|LVXE01000096.1 Genbank gene 1584 1829 . + . ID=gene-A3216_14085;Name=A3216_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14085 GCA_001648835.1|LVXE01000096.1 GeneMarkS+ CDS 1584 1829 . + 0 ID=cds-OAX70092.1;Parent=gene-A3216_14085;Dbxref=NCBI_GP:OAX70092.1;Name=OAX70092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14085;product=hypothetical protein;protein_id=OAX70092.1;transl_table=11 GCA_001648835.1|LVXE01000096.1 Genbank gene 2871 3119 . + . ID=gene-A3216_14090;Name=A3216_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14090 GCA_001648835.1|LVXE01000096.1 GeneMarkS+ CDS 2871 3119 . + 0 ID=cds-OAX70093.1;Parent=gene-A3216_14090;Dbxref=NCBI_GP:OAX70093.1;Name=OAX70093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14090;product=hypothetical protein;protein_id=OAX70093.1;transl_table=11 ##sequence-region LVXE01000097.1 1 3494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000097.1 Genbank region 1 3494 . + . ID=LVXE01000097.1:1..3494;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000097.1 Genbank pseudogene 1 208 . + . ID=gene-A3216_14095;Name=A3216_14095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=A3216_14095;pseudo=true GCA_001648835.1|LVXE01000097.1 GeneMarkS+ CDS 1 208 . + 1 ID=cds-A3216_14095;Parent=gene-A3216_14095;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14095;product=integrase;pseudo=true;transl_table=11 GCA_001648835.1|LVXE01000097.1 Genbank gene 900 2291 . - . ID=gene-A3216_14100;Name=A3216_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14100 GCA_001648835.1|LVXE01000097.1 Protein Homology CDS 900 2291 . - 0 ID=cds-OAX70088.1;Parent=gene-A3216_14100;Dbxref=NCBI_GP:OAX70088.1;Name=OAX70088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907951.1;locus_tag=A3216_14100;product=glycine--tRNA ligase;protein_id=OAX70088.1;transl_table=11 GCA_001648835.1|LVXE01000097.1 Genbank gene 2458 2880 . + . ID=gene-A3216_14105;Name=A3216_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14105 GCA_001648835.1|LVXE01000097.1 Protein Homology CDS 2458 2880 . + 0 ID=cds-OAX70089.1;Parent=gene-A3216_14105;Dbxref=NCBI_GP:OAX70089.1;Name=OAX70089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05840.1;locus_tag=A3216_14105;product=ArsR family transcriptional regulator;protein_id=OAX70089.1;transl_table=11 GCA_001648835.1|LVXE01000097.1 Genbank gene 2954 3349 . + . ID=gene-A3216_14110;Name=A3216_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14110 GCA_001648835.1|LVXE01000097.1 Protein Homology CDS 2954 3349 . + 0 ID=cds-OAX70090.1;Parent=gene-A3216_14110;Dbxref=NCBI_GP:OAX70090.1;Name=OAX70090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907949.1;locus_tag=A3216_14110;product=transcriptional repressor;protein_id=OAX70090.1;transl_table=11 ##sequence-region LVXE01000098.1 1 3485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1297124 GCA_001648835.1|LVXE01000098.1 Genbank region 1 3485 . + . ID=LVXE01000098.1:1..3485;Dbxref=taxon:1297124;collection-date=2012;gbkey=Src;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=7935681 GCA_001648835.1|LVXE01000098.1 Genbank gene 15 356 . - . ID=gene-A3216_14115;Name=A3216_14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14115 GCA_001648835.1|LVXE01000098.1 Protein Homology CDS 15 356 . - 0 ID=cds-OAX70083.1;Parent=gene-A3216_14115;Dbxref=NCBI_GP:OAX70083.1;Name=OAX70083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907599.1;locus_tag=A3216_14115;product=hypothetical protein;protein_id=OAX70083.1;transl_table=11 GCA_001648835.1|LVXE01000098.1 Genbank gene 370 1089 . - . ID=gene-A3216_14120;Name=A3216_14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14120 GCA_001648835.1|LVXE01000098.1 Protein Homology CDS 370 1089 . - 0 ID=cds-OAX70087.1;Parent=gene-A3216_14120;Dbxref=NCBI_GP:OAX70087.1;Name=OAX70087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907598.1;locus_tag=A3216_14120;product=glycosyl transferase;protein_id=OAX70087.1;transl_table=11 GCA_001648835.1|LVXE01000098.1 Genbank gene 1180 1374 . + . ID=gene-A3216_14125;Name=A3216_14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14125 GCA_001648835.1|LVXE01000098.1 GeneMarkS+ CDS 1180 1374 . + 0 ID=cds-OAX70084.1;Parent=gene-A3216_14125;Dbxref=NCBI_GP:OAX70084.1;Name=OAX70084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14125;product=hypothetical protein;protein_id=OAX70084.1;transl_table=11 GCA_001648835.1|LVXE01000098.1 Genbank gene 1401 1616 . - . ID=gene-A3216_14130;Name=A3216_14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14130 GCA_001648835.1|LVXE01000098.1 GeneMarkS+ CDS 1401 1616 . - 0 ID=cds-OAX70085.1;Parent=gene-A3216_14130;Dbxref=NCBI_GP:OAX70085.1;Name=OAX70085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=A3216_14130;product=hypothetical protein;protein_id=OAX70085.1;transl_table=11 GCA_001648835.1|LVXE01000098.1 Genbank gene 2363 3433 . + . ID=gene-A3216_14135;Name=A3216_14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=A3216_14135 GCA_001648835.1|LVXE01000098.1 Protein Homology CDS 2363 3433 . + 0 ID=cds-OAX70086.1;Parent=gene-A3216_14135;Dbxref=NCBI_GP:OAX70086.1;Name=OAX70086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907597.1;locus_tag=A3216_14135;product=hypothetical protein;protein_id=OAX70086.1;transl_table=11 ###